BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040033
(158 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357130210|ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838891 [Brachypodium
distachyon]
Length = 635
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 10 RNSSIPVRGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVEDGDVIMEVDE 69
R ++ + L+ AE++ER+AK + F R + F++E K E+ D+ + +
Sbjct: 128 RGATPVFKKLNAAEMEERQAKGLCFNCDEKFVRGHRCKCLFYIEVADKEEEEDLQISLLA 187
Query: 70 NAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVN------LILQGV 123
GVR S+T+++ +G + L+DSGSTHNFIS+ A V I G
Sbjct: 188 ITGVRTSDTMQLVVWVGERELLALIDSGSTHNFISEELAAHVSAPFCTGRRLRVTIANGD 247
Query: 124 YV------------------IVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+V +VD L G+DVVLGT WL+TL PILWDF
Sbjct: 248 HVTCSGLLRHTAIAIGQESFVVDLYAIPLGGFDVVLGTHWLKTLGPILWDF 298
>gi|242085414|ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
gi|241943825|gb|EES16970.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
Length = 1462
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 43/184 (23%)
Query: 16 VRGLSRAELQERRAKVCATIATKSFPRDIGERSC---FFMEACVKVEDGDVIMEVDENA- 71
+R LS+ E+ ERR + + + R R C FF++ V+V+D + E + A
Sbjct: 249 IRRLSKDEMAERRRQGLCFNCNEPYTRG-HNRFCKRLFFVDG-VEVDDVEDAAEAGDQAA 306
Query: 72 -------------GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVN- 117
GVR S+TLR+ +G++S + L DSGS+HNFIS+ A++ +V+
Sbjct: 307 GTDAPCYSLHAVAGVRLSDTLRVRVMVGSVSLVALSDSGSSHNFISERAAQRTGLLVVSR 366
Query: 118 -----------------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILW 154
++QG D + L G+DVVLG QWL TL P+ W
Sbjct: 367 PRLSAVVANGERIACPGVLPQAPFVIQGSSFTADLFIMPLAGFDVVLGAQWLGTLGPVTW 426
Query: 155 DFAS 158
DF +
Sbjct: 427 DFTA 430
>gi|218197921|gb|EEC80348.1| hypothetical protein OsI_22431 [Oryza sativa Indica Group]
Length = 402
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 33/173 (19%)
Query: 17 RGLSRAELQERRAKV----CATIATKSFPRDIGERSCFFMEACV-----KVEDGDVIMEV 67
R LS AE+ E R K C +K R + + +E + D V + +
Sbjct: 102 RRLSAAEMAECREKGLCFNCPEKFSKDHHRQCSMKGIYLLEMDEGEDDDSINDDTVTISL 161
Query: 68 DENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV------KNFIVNLILQ 121
G+R S+T+R+ IG ++ LVDSGSTH F++ A+++ K+ + ++
Sbjct: 162 HALTGIRTSKTMRLAVIIGGVTMSALVDSGSTHTFVATEAARRLGLSPTTKSGLNVMVAN 221
Query: 122 GVYV------------------IVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
G V I+D + LEGYDVVLG QWLRTL PILWDF
Sbjct: 222 GDQVTSSGICSGIPIKIDSEDFIIDCYVIPLEGYDVVLGVQWLRTLGPILWDF 274
>gi|147774273|emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 49/197 (24%)
Query: 10 RNSSIPVRGLSRAELQERRAK-VCATIATKSFPRDIGERSCFFMEACVKVEDGDV----- 63
+ + +PV+ LS ++++ERR K +C K P + + F+ C + D +V
Sbjct: 268 KRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSDDEVPKSEV 327
Query: 64 -------------IMEVDENAGVRA------SETLRINGRIGNISPIVLVDSGSTHNFI- 103
I+E++ + A +T+R G I + ++LVD+GSTHNF+
Sbjct: 328 AEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMD 387
Query: 104 -------------SDTFAKKVKN----------FIVNLILQGVYVIVDFNLRELEGYDVV 140
++ + KV N V L +QG +DF + L G D+V
Sbjct: 388 PSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIV 447
Query: 141 LGTQWLRTLEPILWDFA 157
LG QWL+TL PILWDF+
Sbjct: 448 LGVQWLQTLGPILWDFS 464
>gi|18425247|gb|AAL69425.1|AC098565_7 Putative polyprotein [Oryza sativa]
gi|31430198|gb|AAP52144.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 848
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 12 SSIPVRGLSRAELQERRAK-VCATIATKSFPRDIGERSCFFMEACVKVEDGDVIMEVDEN 70
S++P + LS AE+ +RR++ +C KS R A E + +
Sbjct: 283 SALPRKRLSPAEMAQRRSEGLCYNCDEKSSASQRKLRRTPTAHALTLDEPS---ISLHAL 339
Query: 71 AGVRAS--ETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK---------------- 112
AGVR T+++ RIG + L+DSGSTHNFISD A++ +
Sbjct: 340 AGVRTPTFNTIKVQARIGATDLVALLDSGSTHNFISDVAARRARVPLEPRHGLSVAVANG 399
Query: 113 -------NFIVNLILQGVYV-IVDFNLRELEGYDVVLGTQWLRTLEPILWDFA 157
F + G + ++DF L GYDVVLG QWL +L P LWDFA
Sbjct: 400 DRITSPGCFPSQRVTIGDHTFVIDFYALPLGGYDVVLGAQWLGSLGPTLWDFA 452
>gi|242065034|ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
gi|241933637|gb|EES06782.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
Length = 1414
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 19 LSRAELQERRAKVCATIATKSFPRDIG--ERSCFFMEACVKVEDGDVIMEVDENAGVRAS 76
+ R +Q + +K + I + D SCF + ++ + + D AGV +
Sbjct: 234 VQRPRIQHQASKAISFILVPAVVLDTFSIRASCFTLHTSAYMKPAEALFPWDPVAGVPLA 293
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK----------VKNFIVN--------- 117
+T+++ +G + + L+DSGSTHNFI++ A++ + + N
Sbjct: 294 DTMQVRVSVGTATFVALLDSGSTHNFIAEEAARRTGLRVQPRARMTAMVANGEKIPCPGV 353
Query: 118 -----LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ + +D + L GYD+VLGTQW+ TL PI+WDFA+
Sbjct: 354 IRHAPVTIDNTTFAIDLFVMPLAGYDIVLGTQWMATLGPIVWDFAA 399
>gi|147843077|emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 49/197 (24%)
Query: 10 RNSSIPVRGLSRAELQERRAK-VCATIATKSFPRDIGERSCFFMEACVKVEDGDV----- 63
+ + +PV+ LS ++++ERR K +C K P + F+ C + D +V
Sbjct: 235 KRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIMECDESSDDEVPKSEV 294
Query: 64 -------------IMEVDENAGVRA------SETLRINGRIGNISPIVLVDSGSTHNFI- 103
I+E++ + A +T+R G I + ++LVD+GSTHNF+
Sbjct: 295 AEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMD 354
Query: 104 -------------SDTFAKKVKN----------FIVNLILQGVYVIVDFNLRELEGYDVV 140
++ + KV N V L +QG +DF + L G D+V
Sbjct: 355 PSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIV 414
Query: 141 LGTQWLRTLEPILWDFA 157
LG QWL+TL PILWDF+
Sbjct: 415 LGVQWLQTLGPILWDFS 431
>gi|147789424|emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 49/193 (25%)
Query: 14 IPVRGLSRAELQERRAK-VCATIATKSFPRDIGERSCFFMEACVKVEDGDV--------- 63
+PV+ LS ++++ERR K +C K P + + F+ C + D V
Sbjct: 237 VPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSDDKVPKSEVAEGR 296
Query: 64 ---------IMEVDENAGVRA------SETLRINGRIGNISPIVLVDSGSTHNFI----- 103
I+E++ + A +T+R G I + ++LVD+GSTHNF+
Sbjct: 297 ASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSVI 356
Query: 104 ---------SDTFAKKVKN----------FIVNLILQGVYVIVDFNLRELEGYDVVLGTQ 144
++ + KV N V L +QG +DF + L G D+VLG Q
Sbjct: 357 QRAHLPSNPTEGLSVKVANGQAVCSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQ 416
Query: 145 WLRTLEPILWDFA 157
WL+TL PILWDF+
Sbjct: 417 WLQTLGPILWDFS 429
>gi|116309032|emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]
Length = 1448
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 41/183 (22%)
Query: 16 VRGLSRAELQERRAKVCATIATKSFPRDIGERSC---FFMEACVKVED-------GDV-- 63
++ L++AE +ERR K + + R R C F +E + ED GD
Sbjct: 261 IKRLTQAEQEERRRKGLCYNCDEKYTRG-HNRVCQRLFLLEGIEEDEDDGTPEDFGDAGA 319
Query: 64 ----IMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK--------- 110
+ + AGV ++T+++ +G S + L+DSGSTHNFIS+ A++
Sbjct: 320 EDAPVFSLQAIAGVSFTDTMQVAVTLGTASLVALLDSGSTHNFISEAAAQRSGLPLQQRP 379
Query: 111 -VKNFIVN--------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWD 155
+ + N L + G D + L GYDVVLGT+WL L PI+WD
Sbjct: 380 RLTAMVANGERVTCIGVIRGAPLTIGGNSFPADLFVMPLAGYDVVLGTRWLGALGPIVWD 439
Query: 156 FAS 158
A+
Sbjct: 440 LAT 442
>gi|356529593|ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
Length = 572
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 47/190 (24%)
Query: 16 VRGLSRAELQERRAK-VCATIATKSFPR-----DIGERSCFFMEACVKVEDGDVIMEVDE 69
+R + E +ERRAK +C K P + R E ++G+++ D
Sbjct: 315 IRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIVSMKDV 374
Query: 70 N-----------------AGVRASETLRINGRIGNISPIVLVDSGSTHNFISD------- 105
+ S T+R+ G+I N+ +VL+DSG++HNFIS
Sbjct: 375 TVESEEEVEVECKLMGVLGSMGESHTMRVEGKIHNVDLLVLIDSGASHNFISPKVTTALG 434
Query: 106 -----TFAKKVK---------NFI---VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRT 148
T AK +K N + VN+ + G+ VIVD + EL G D+VLG WLRT
Sbjct: 435 LVITPTVAKSIKLGDGHRLITNGVCKGVNMQMGGIEVIVDALVLELGGMDMVLGVAWLRT 494
Query: 149 LEPILWDFAS 158
L ++ D+ +
Sbjct: 495 LGNVIMDWKA 504
>gi|108864287|gb|ABA92869.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 413
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 17 RGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVEDGDVIMEVDEN------ 70
R LS AEL ERR + + F R F++E VE GD+ DE
Sbjct: 154 RRLSPAELAERRCQGLCYNCDEKFVRGHKCARLFYIEYDDNVE-GDMEPAPDEPRVSLNV 212
Query: 71 -AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQGVYVIVD- 128
AG+ + T+R+ I + LVDSGSTHNFI A+ + ++ + +YV+V
Sbjct: 213 LAGLDGANTMRLPVEIAGERVVALVDSGSTHNFIHTELARHL-CLHLSPVRHDLYVVVAN 271
Query: 129 ----------FNLR-ELEG--------------YDVVLGTQWLRTLEPILWDF 156
NLR +EG D++LGT+WL TL PILWDF
Sbjct: 272 GDRLVSPGRCANLRLRIEGKLFTVDCFALDISTVDIILGTEWLSTLGPILWDF 324
>gi|62734405|gb|AAX96514.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 575
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 33/172 (19%)
Query: 17 RGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVEDGDVIMEVDEN------ 70
R LS AEL ERR + + F R F++E VE GD+ DE
Sbjct: 316 RRLSPAELAERRCQGLCYNCDEKFVRGHKCARLFYIEYDDNVE-GDMEPAPDEPRVSLNV 374
Query: 71 -AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV---------KNFIV---- 116
AG+ + T+R+ I + LVDSGSTHNFI A+ + ++V
Sbjct: 375 LAGLDGANTMRLPVEIAGERVVALVDSGSTHNFIHTELARHLCLHLSPVRHDLYVVVANG 434
Query: 117 ------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
L ++G VD ++ D++LGT+WL TL PILWDF
Sbjct: 435 DRLVSPGRCANLRLRIEGKLFTVDCFALDISTVDIILGTEWLSTLGPILWDF 486
>gi|242033109|ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
gi|241917803|gb|EER90947.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
Length = 1450
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 48/184 (26%)
Query: 17 RGLSRAELQERRAKVCATIATKSFPRDIGERSC---FFMEACVKVEDGDV---------- 63
R L+ E+ ERR + + F R R C FF++ V+++D
Sbjct: 332 RRLTPEEMAERRRQGLCFNCNEKFSRG-HNRFCKRLFFLDG-VEIDDAPADETEAAADAV 389
Query: 64 -----IMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK-------- 110
I + AGV T+R+ R+G+ I L+D+GSTHNFI++T A +
Sbjct: 390 AQEAPIFSLHVVAGVSVGRTMRVRVRVGSTPLIALLDTGSTHNFIAETAAARSGLPIQSQ 449
Query: 111 ------------------VKNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPI 152
+KN L + VD + L G+D+VLGTQW+ TL +
Sbjct: 450 PRLTAMVANGEKVPCPGVIKN--APLAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRL 507
Query: 153 LWDF 156
+WDF
Sbjct: 508 VWDF 511
>gi|242085372|ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
gi|241943804|gb|EES16949.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
Length = 1456
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 44/182 (24%)
Query: 17 RGLSRAELQERRAKVCATIATKSFPRDIGERSC---FFMEACVKVEDGDV---------- 63
R L+ E+ ERR + + F R R C FF+E V+++D
Sbjct: 273 RRLTPEEMAERRRQGLCFNCNEKFSRG-HNRFCKRLFFLEG-VEIDDAQAEETDAAADAV 330
Query: 64 -----IMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------- 109
I + AGV T+++ R+G+ I L+D+GSTHNFI++T A
Sbjct: 331 AQEAPIFSLHAVAGVSVGRTMQVRVRVGSTPLIALLDTGSTHNFIAETAAARSGLPIQSQ 390
Query: 110 -KVKNFIVN--------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILW 154
++ + N + + VD + L G+D+VLGTQW+ TL ++W
Sbjct: 391 PRLTAMVANGEKVPCPGVIKHAPIAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVW 450
Query: 155 DF 156
DF
Sbjct: 451 DF 452
>gi|147864527|emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 47/199 (23%)
Query: 1 MPTTNQ-TTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFP-RDIGERSCFFMEACVK 57
+P TN T RN R S +L ERRAK +C K P + + M+ V+
Sbjct: 292 IPKTNPGITTRNH----RNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVE 347
Query: 58 VE----DGDVIME--VDENAGVRAS----------ETLRINGRIGNISPIVLVDSGSTHN 101
+ +G++ ME +E+ ++ S +T+ +NG S VL+DSGS+HN
Sbjct: 348 TDGEGPEGNLQMEGLXEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLIDSGSSHN 407
Query: 102 FISDTFAKKV-------KNFIVNLI-----------------LQGVYVIVDFNLRELEGY 137
F+S AK+V + V + +QG I + + LE Y
Sbjct: 408 FLSSKVAKRVDCCWQKARGIRVTVANGQELHCTALCSDFRWRMQGQEFIAEVYVLPLETY 467
Query: 138 DVVLGTQWLRTLEPILWDF 156
D++LGTQWL TL I W+F
Sbjct: 468 DLILGTQWLATLGDISWNF 486
>gi|14626274|gb|AAK71542.1|AC087852_2 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108711059|gb|ABF98854.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 258
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISD------------------TFAKKVK 112
AGV ++T+++ +G + L+DSGSTH+FI++ T A K
Sbjct: 27 AGVPVADTMQVQVTVGATTLTALLDSGSTHSFIAEEAACRTGLPVQPRPRMTATVANGEK 86
Query: 113 NFIVNLILQGVYVI------VDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+I Q V I VD + L GYD+VLGTQW+ +L PI+WDF
Sbjct: 87 VACPGVIRQAVLSIDGSLFTVDLFVIPLAGYDMVLGTQWMASLGPIVWDF 136
>gi|242095940|ref|XP_002438460.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
gi|241916683|gb|EER89827.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
Length = 1437
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 10 RNSSIPVRGLSRAELQERRAKVCATIATKSFPRDIGE--RSCFFMEACVKVEDGDVIMEV 67
R + V+ LS E ERR + + R R FF++ V++ D + + +
Sbjct: 257 RGAPNQVKRLSTEEQAERRRLGLCYNCNEPYSRGHNRVCRRIFFIDG-VELADDEAVPDD 315
Query: 68 DENA----------GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK-------- 109
E A G+ +T+++ +G+++ L+D+GSTHNFI++T A
Sbjct: 316 AEPAAPVFSLRAVTGMPICDTMQVRVAVGDVTLTALLDTGSTHNFIAETAATRTGLPVLA 375
Query: 110 --KVKNFIVN--------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPIL 153
++ + N +I+ G VD + L GYD+VLGTQWL TL I
Sbjct: 376 DPRLTATVANGERIACPGVLRQAPIIIDGEGFCVDLYVLPLAGYDLVLGTQWLVTLGRIE 435
Query: 154 WDFAS 158
WDF +
Sbjct: 436 WDFTA 440
>gi|242070717|ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
gi|241936478|gb|EES09623.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
Length = 1507
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 79/180 (43%), Gaps = 39/180 (21%)
Query: 17 RGLSRAELQERRAKVCATIATKSFPRDIGE--RSCFFMEACVKVEDG--DV--------- 63
R LS E+ ERR + + R R FF+E V++++ DV
Sbjct: 342 RRLSPEEMAERRRLGLCFNCNEKYTRGHNRFCRRIFFLEG-VEIDNAPDDVAAAEPDAEA 400
Query: 64 -IMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK----------VK 112
+ AGV + T++ +G + L+DSGSTHNFIS A++ +
Sbjct: 401 PCFSLQAVAGVPVAGTMQPRVSLGAAILVALLDSGSTHNFISAAAARRSGLPLRQRPRLT 460
Query: 113 NFIVN--------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ N L++ GV D + L GYDVVLGT+WL L PI+WD +S
Sbjct: 461 ALVANGERVTCDGVIRDAPLLIDGVTFPADLFVMPLAGYDVVLGTRWLGALGPIVWDLSS 520
>gi|356511037|ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
Length = 1863
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------------KVKNFIV 116
AGV A++T R+ G I + +LVDSGSTHNF+ AK V N V
Sbjct: 298 AGVPATDTFRLYGVINHTRVTILVDSGSTHNFVQPRIAKFLGLPMEDTTSLQVMVGNGSV 357
Query: 117 ----------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
L+LQ V + + G DVVLG +WLRTL PI+ D+ S
Sbjct: 358 LECKQSCPATTLLLQQHSFTVTLRVLPISGADVVLGVEWLRTLGPIITDYTS 409
>gi|89887334|gb|ABD78322.1| polyprotein [Primula vulgaris]
Length = 1359
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 82/195 (42%), Gaps = 42/195 (21%)
Query: 4 TNQTTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFPRDIGERSCFFM----EACVKV 58
TN TT P++ L++ EL +RR K +C K F + + F+ E
Sbjct: 198 TNNTTAITKLPPIKRLTQDELTDRRQKNLCYNCDEKWFRGHVCVKPKIFLLQNVEEFENE 257
Query: 59 EDGDVIMEVDEN-------------AGVRASETLRINGRIGNISPIVLVDSGSTHNFI-- 103
+ + + E+DEN GV S ++R G++ +LVDSGSTHNFI
Sbjct: 258 INEESVEEIDENIVGENAEITLQAITGVTNSTSIRFVGKLKGQKVSILVDSGSTHNFIDP 317
Query: 104 ------------SDTFAKKVKNF----------IVNLILQGVYVIVDFNLRELEGYDVVL 141
SD K+ N V L++Q VDF L L GYD+VL
Sbjct: 318 KWVPLLKLSNVQSDIMEVKIANGDKIKSSGTCEKVKLLIQENQFEVDFLLLPLVGYDLVL 377
Query: 142 GTQWLRTLEPILWDF 156
G WL L I DF
Sbjct: 378 GVHWLSQLGVINCDF 392
>gi|242077302|ref|XP_002448587.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
gi|241939770|gb|EES12915.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
Length = 797
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 44/182 (24%)
Query: 17 RGLSRAELQERRAKVCATIATKSFPRDIGERSC---FFMEACVKVEDGDV---------- 63
R L+ E+ ERR + + F R R C FF+E ++++D
Sbjct: 332 RRLTPEEMAERRRQGLCFNYNEKFSRG-HNRFCKRLFFLEG-MEIDDAQAEETDAAADAV 389
Query: 64 -----IMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------- 109
I + GV T+++ R+G+ I L+D+GSTHNFI++T A
Sbjct: 390 AQEAPIFSLHAVVGVSVGRTMQVRVRVGSTPLIALLDTGSTHNFIAETAAARSGLPIQSQ 449
Query: 110 -KVKNFIVN--------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILW 154
++ + N + + VD + L G+D+VLGTQW+ TL ++W
Sbjct: 450 PRLTAMVANGEKVPCLGVIKHAPIAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVW 509
Query: 155 DF 156
DF
Sbjct: 510 DF 511
>gi|115457202|ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group]
gi|38346036|emb|CAE01900.2| OSJNBa0059D20.8 [Oryza sativa Japonica Group]
gi|113563772|dbj|BAF14115.1| Os04g0191000 [Oryza sativa Japonica Group]
Length = 1463
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK----------VKNFIVN--- 117
AGV ++T+++ +G+ S + L+D GSTH+FI + A++ + + N
Sbjct: 333 AGVPIADTIQLQVTVGDASLLALLDGGSTHSFIGEEAARRAGLPIQSSPRMTAIVANGER 392
Query: 118 -----------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ G D + L G+DVVLGT+WL TL PI+WDF S
Sbjct: 393 VACPGVIRDAAFTINGSTFHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTS 444
>gi|147852240|emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 47/199 (23%)
Query: 1 MPTTNQ-TTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFP-RDIGERSCFFMEACVK 57
+P TN T RN S +L ERRAK +C K P + + M+ V+
Sbjct: 292 IPKTNPGITTRNHX----NFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVE 347
Query: 58 VE----DGDVIMEV--DENAGVRAS----------ETLRINGRIGNISPIVLVDSGSTHN 101
+ +G++ ME +E+ ++ S +T+ +NG S VL+DSGS+HN
Sbjct: 348 TDGEGPEGNLQMEGLGEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLIDSGSSHN 407
Query: 102 FISDTFAKKV-------KNFIVNLI-----------------LQGVYVIVDFNLRELEGY 137
F+S AK+V + V + +QG I + + LE Y
Sbjct: 408 FLSSKVAKRVDCCWQKARGIRVTVANGHELHCTALCSDFRWRMQGQEFIAEVYVLPLETY 467
Query: 138 DVVLGTQWLRTLEPILWDF 156
D++LGTQWL TL I W+F
Sbjct: 468 DLILGTQWLATLGDISWNF 486
>gi|387169525|gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 81/203 (39%), Gaps = 48/203 (23%)
Query: 2 PTTNQTTCRNSSIPVRGLSRAELQERRAK----VCATIATKSFPRDIGERSCFFMEAC-- 55
P T N++ P R + E+QERR K C T + F ME
Sbjct: 372 PKTLPYKPNNTNKPTRKFTYDEMQERRTKGLCMFCDEPYTPGHHLKHRKSQIFVMECEED 431
Query: 56 ---------VKVEDGDVIMEVDE-------NA--GVRASETLRINGRIGNISPIVLVDSG 97
VE+ D ++ +E NA G +R+ G+ G + VD G
Sbjct: 432 DLDDEQEVNATVEEEDAVVNPNEEQPTISANALNGSTTFNCMRLMGQYGKHKLHIFVDPG 491
Query: 98 STHNFISDTFAKKV-------KNFIVNLILQGVYVIV----DFNLR-------------E 133
STHNFI AK++ + V+ L G V + DF R
Sbjct: 492 STHNFIDIKVAKEINCKLEGTRPMTVDAALGGKTVTLFRSKDFTWRMQGYSFTTEVRTLP 551
Query: 134 LEGYDVVLGTQWLRTLEPILWDF 156
L+ +D+VLG QWL TL PILWDF
Sbjct: 552 LDHWDIVLGVQWLATLGPILWDF 574
>gi|356574444|ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813803 [Glycine max]
Length = 2140
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 24/110 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------------KVKNFIV 116
AGV A++T R+ G I +LVDSGSTHNF+ AK V N V
Sbjct: 213 AGVPATDTFRLYGLINKTRVTILVDSGSTHNFVQPRVAKFLNLPLHDTQPLRVMVGNGSV 272
Query: 117 ----------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+++Q +V L L G DVVLG +WLRTL P++ D+
Sbjct: 273 LDCQQMIPDTTILIQEHRFVVTLRLLPLSGADVVLGVEWLRTLGPVITDY 322
>gi|147842329|emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]
Length = 522
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 39/184 (21%)
Query: 1 MPTTNQTTCRNSSIPVRGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVED 60
+PTT + + V+ LS E+Q+RRA+ + F G R C E K +
Sbjct: 249 LPTTTKASH------VKRLSWEEMQKRRAQGLCFNCDEKFTS--GHR-C--KEGDTKEAE 297
Query: 61 GDVIM--EVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDT---------- 106
D+ E+ +A G ++T+R+ +IG +VL+DSGSTHNFISD
Sbjct: 298 TDLPSDPEISLHALIGWTTTKTMRVTAKIGTHDVVVLIDSGSTHNFISDKVVALLHLPVV 357
Query: 107 ----FAKKVKNFI----------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPI 152
F +V N ++++LQG+ + F L G D+VLG QWL L +
Sbjct: 358 PTAPFHVRVANGQPLKCQGRFDNIHILLQGIPFSITFYSLPLNGLDLVLGVQWLEQLGSV 417
Query: 153 LWDF 156
+ D+
Sbjct: 418 VCDW 421
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 24/111 (21%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK------------------- 112
G+R ++T++ I I + LVDSGSTHNFI+ KV
Sbjct: 1266 GIRKAQTMQPPVLINGIQLMALVDSGSTHNFIAAELIDKVGLKLAPRTGLSVAVANGNKI 1325
Query: 113 -----NFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ + + + ++D L G+D+VLG QWLR+L PI WDF++
Sbjct: 1326 TCGGVCYTTPISIDHEHFVLDLLTIPLGGFDIVLGVQWLRSLGPITWDFSN 1376
>gi|440577416|emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]
Length = 267
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 24/109 (22%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV------KNFIVNLILQGVYV 125
G+R ++T+++ I + + LVDSGSTHNF++ +V + + + G +V
Sbjct: 57 GIRKTQTMQLAVIINGVHLLALVDSGSTHNFVAAELVARVGLSLTPRTGLSVAVANGDHV 116
Query: 126 ------------------IVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
I+DF L+G+DVVLG QWL +L PI WDF
Sbjct: 117 TSGGICRATLISIDKEDFILDFLTIPLDGFDVVLGVQWLGSLGPITWDF 165
>gi|115487072|ref|NP_001066023.1| Os12g0121200 [Oryza sativa Japonica Group]
gi|113648530|dbj|BAF29042.1| Os12g0121200, partial [Oryza sativa Japonica Group]
Length = 461
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 24/104 (23%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV------KNFIVNLILQGVYVI----- 126
T+++ R+G+ + L+DSGSTHNFI+D A + + + + G V
Sbjct: 1 TIKVWARLGSQELVALLDSGSTHNFINDAIAHQAGVPLQRRPGLSVAVANGDRVPSPGRC 60
Query: 127 -------------VDFNLRELEGYDVVLGTQWLRTLEPILWDFA 157
+DF L GYD+VLG QWL TL P LWDF+
Sbjct: 61 PPQRVSIGSHEFDIDFYALPLGGYDIVLGAQWLGTLGPTLWDFS 104
>gi|115481476|ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
gi|15217201|gb|AAK92545.1|AC051624_3 Putative retroelement [Oryza sativa Japonica Group]
gi|31431040|gb|AAP52878.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza sativa Japonica Group]
Length = 1476
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 42/185 (22%)
Query: 15 PVRGLSRAELQERRAKVCATIATKSFPRDIGE--RSCFFMEACVKVEDGDVIMEVDEN-- 70
PV+ LS+A+ +ERR + + R + + FF+E +E+GD +E D
Sbjct: 260 PVKRLSQAQQEERRRLGLCYNCDEKYSRSHNKVCKRLFFVEGGA-IEEGDDTVEDDTEEA 318
Query: 71 ------------AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA---------- 108
AG+ + + + +G S + LVD+GSTHNFI + A
Sbjct: 319 TVEAPVFSLHAVAGIPLGKPILLQVTLGAASLVALVDTGSTHNFIGEDAALRTGLPVQPR 378
Query: 109 KKVKNFIVN--------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTL-EPIL 153
++ + N + +QG+ VD + L GYD+VLGTQW+ L I
Sbjct: 379 PRLTATVANGEKVSCPGVLRRAPITIQGMAFDVDLYVMPLAGYDMVLGTQWMAHLGTTIA 438
Query: 154 WDFAS 158
WD +
Sbjct: 439 WDVTT 443
>gi|32483242|emb|CAE02543.1| OSJNBb0069N01.1 [Oryza sativa Japonica Group]
gi|38344504|emb|CAE05183.2| OSJNBa0013A04.20 [Oryza sativa Japonica Group]
Length = 1395
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 24/111 (21%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK---------NFIV----NL 118
GVR S+ + I +G+ L+DSGST F+S A +V N V +
Sbjct: 388 GVRVSDAMHIMVHLGDTDLYALIDSGSTPTFLSQDAAARVGRDPQPRSGLNVTVANGDKV 447
Query: 119 ILQGVYVIVDFNLR-----------ELEGYDVVLGTQWLRTLEPILWDFAS 158
GV+ + F + L GYD+VLGTQWL TL PILWDF +
Sbjct: 448 ACPGVFPDMPFQIAGEEFATDVYVLTLGGYDLVLGTQWLATLGPILWDFTA 498
>gi|242093834|ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
gi|241915630|gb|EER88774.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
Length = 1609
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 24/109 (22%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV-----------------KNF 114
G+RA ET+++ +G L+DSGSTHNFIS A +
Sbjct: 501 GIRAHETMQLRVHVGPHELTALLDSGSTHNFISSAAAHRAGLHFKDSEGAHVTVANGDRV 560
Query: 115 IVNLILQGVYVIVDFNLRELEGY-------DVVLGTQWLRTLEPILWDF 156
+ + +GV + + + +++ Y D+VLG WLRTL PILWDF
Sbjct: 561 LCRGLARGVNLQIGMEVFKVDCYAIPLDSCDMVLGIAWLRTLGPILWDF 609
>gi|147860532|emb|CAN81876.1| hypothetical protein VITISV_034528 [Vitis vinifera]
Length = 1241
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 24/106 (22%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDT--------------FAKKVKNFI-- 115
G +T+RI +IG +VL+DSGSTHNFIS+ F KV N
Sbjct: 329 GWSTPKTMRITAKIGQHKVVVLIDSGSTHNFISEKVADMLHLPVVPTKPFTVKVANGTPL 388
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPIL 153
V++ILQG+ + L G D+VLG QWL LE ++
Sbjct: 389 KCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLETVV 434
>gi|170660047|gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 24/104 (23%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV----KNF-IVNLI------------- 119
T+R+ G + N +L+DSGSTHNF+ A K+ +N VN+
Sbjct: 11 TMRLCGTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLISSSTC 70
Query: 120 ------LQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFA 157
+QG+ + L L G D+VLG QWL+ L PILWDF+
Sbjct: 71 RAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFS 114
>gi|108862596|gb|ABA97714.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1287
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 24/98 (24%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAKK----------VKNFIVN--------------LIL 120
+G S + +DSGSTHNFIS+ A++ + + N L +
Sbjct: 309 LGPASLVAFLDSGSTHNFISEAAARRSGMPLHTRPRLTAMVANGERVTCAGVLKAAPLTI 368
Query: 121 QGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
G D + L G+DVVLGT WL TL PI+WD AS
Sbjct: 369 DGALFPADLFVMPLVGFDVVLGTCWLGTLGPIVWDLAS 406
>gi|147860462|emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
Length = 1384
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFIS--------------DTFAKKVKNFI-- 115
G +T+RI +IG +VL+DSGSTHNFIS D F KV N
Sbjct: 405 GWSTPKTMRITTKIGQHEVVVLIDSGSTHNFISEKVVDMLHLPXVPTDPFTVKVANGTPL 464
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V++ILQG+ + L G D+VLG QWL L
Sbjct: 465 KCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQL 506
>gi|147773289|emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]
Length = 1575
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 26/117 (22%)
Query: 59 EDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK---- 112
+G +E+ +A G +T+RI RIG +VLVDSGSTHNFIS+ A ++
Sbjct: 611 HEGSPGLEITLHALMGWTVPKTMRIVARIGAHDVVVLVDSGSTHNFISERMANLLRLPVV 670
Query: 113 ---NFIV------NLILQGVYVIVDFNLR-----------ELEGYDVVLGTQWLRTL 149
+F+V NL QG + V NL+ L G D+VLG QWL L
Sbjct: 671 PTESFMVRVANGENLRCQGRFEEVQINLQGTIFSLTLYSLPLTGLDIVLGIQWLELL 727
>gi|38347240|emb|CAE05433.2| OSJNBa0059H15.4 [Oryza sativa Japonica Group]
Length = 407
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 56 VKVEDGDVI-MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK---V 111
++VE+ +++ + + +G ++ + RI G I ++L+DSGS+H+F+ A K V
Sbjct: 61 LEVEESNLMALSLQAISGTESATSFRIKGCIQGTEVLMLIDSGSSHSFLDTQVAHKFQGV 120
Query: 112 KNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ L ++GV DF L L YDV+LG WL TL + D+A+
Sbjct: 121 QPLQKVLSVKGVGFHTDFKLLSLGVYDVILGMDWLVTLGTMNIDWAA 167
>gi|15451607|gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
gi|108706172|gb|ABF93967.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1461
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 15 PVRGLSRAELQERRAKVCATIATKSFPRDIGE--RSCFFMEACVKVEDGDV--------- 63
PVR L++AE +ERR + + R + + FF+++ ++
Sbjct: 269 PVRRLNQAEQEERRRLGLCFNCDEKYSRGHNKVCKRLFFVDSVEDEDEEAPEDEVDAEAP 328
Query: 64 IMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK----------KVKN 113
+ + AGV + + ++G + + LVD+GSTHNFI ++ A ++
Sbjct: 329 VFSLHAVAGVAVGHPILLRVQLGATTLVALVDTGSTHNFIGESAAARTGLSVQPRPRMTA 388
Query: 114 FIVN--------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ N + ++G+ VD + L GYD+VLGTQW+ L + WD +
Sbjct: 389 TVANGEKVACPGVLRHAPITIEGMPFHVDLYVMPLAGYDIVLGTQWMAKLGRMSWDVTT 447
>gi|12322008|gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana]
gi|10998138|dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 5 NQTTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFPRDI---GERSCFFMEACVKVED 60
N+ + S + +S+ E+ +RR+K +C K P + F M+ + ED
Sbjct: 301 NKGNFKPVSQQPKKMSQQEMSDRRSKGLCYFCDEKYTPEHYLVHKKTQLFRMDVDEEFED 360
Query: 61 G--DVIMEVDEN---------AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK 109
+++ + DE+ +G+ +T+R+ G +L+DSGSTHNF+ A
Sbjct: 361 AREELVNDDDEHMPQISVNAVSGIAGYKTMRVKGTYDKKIIFILIDSGSTHNFLDPNTAA 420
Query: 110 KVKNFIVNLILQGVYV-----------IVDFNLR-------------ELEGYDVVLGTQW 145
K+ + L V V + DF+ + L+G D+VLG QW
Sbjct: 421 KLGCKVDTAGLTRVSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQW 480
Query: 146 LRTLEPILWDF 156
L TL I W+F
Sbjct: 481 LETLGRISWEF 491
>gi|359479937|ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
Length = 787
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 26/121 (21%)
Query: 55 CVKVEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
+V++ + +E+ +A G A +T+R+ ++G +VL+DSGSTHNFIS+ A K++
Sbjct: 306 AAEVQEHEPKLEITLHALTGWTAPKTMRVTAKMGPHEVMVLIDSGSTHNFISNRLANKLR 365
Query: 113 NFIV-------------NLILQGVYVIVDFNLR-----------ELEGYDVVLGTQWLRT 148
++ L QG Y V L+ L G D+VLG QWL
Sbjct: 366 LPVIPTETFPVWVANGERLKCQGRYDKVRVELQGTEFYLTLFSLPLSGLDLVLGVQWLEM 425
Query: 149 L 149
L
Sbjct: 426 L 426
>gi|147841216|emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
Length = 1852
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 43/188 (22%)
Query: 10 RNSSIPVRGLSRAELQERRAK-VCATIATKSFP--RDIGERSCFFMEACVKVEDGDVIME 66
R S +P R L E+Q+RRA+ +C + P + G R +E +V+D +
Sbjct: 186 RTSIVPKR-LGWEEMQKRRAQGLCFNCNERFTPGHKCQGPR-LLLIEGHDEVQDKEEEAX 243
Query: 67 VDEN------------AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV--- 111
+ +N G + T+R+ I + +VL+DSGSTHNF+SD A+ +
Sbjct: 244 ISDNREDELEVSIHALXGWASPRTMRVAATIKSQPIMVLIDSGSTHNFLSDKVARTLRLP 303
Query: 112 ----KNFIVN------LILQGVYVIVDFNLR-----------ELEGYDVVLGTQWLRTLE 150
K+F V+ L+ QG + V +L+ L G D+VLG QWL L
Sbjct: 304 VVPTKSFTVHVANGERLLCQGRFEKVPIDLQGIPFSLTCYSLPLAGLDMVLGIQWLXMLG 363
Query: 151 PIL--WDF 156
++ W +
Sbjct: 364 SVVCNWQY 371
>gi|449473450|ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 564
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 51/190 (26%)
Query: 10 RNSSIPVRGLSRAELQERRAK-VCATIATKSFP------RDIGERSCFFMEACVKVEDGD 62
+ S PV+ LS AE + R K +C + P +D E F M +ED D
Sbjct: 138 QKSEPPVKRLSDAEFRARLDKGLCFKCNERYSPGHRCKMKDKRELMLFIMNEEESLEDED 197
Query: 63 VIMEVDENA--------------------GVRASETLRINGRIGNISPIVLVDSGSTHNF 102
E +E G+ + T++I G I ++L+DSG+THNF
Sbjct: 198 RTEETNEEVLELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEVLILIDSGATHNF 257
Query: 103 ISDTFAKKVKNFIVN------------------------LILQGVYVIVDFNLRELEGYD 138
I + ++V + N L L+ + ++ DF EL D
Sbjct: 258 IHNKIVEEVGLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVD 317
Query: 139 VVLGTQWLRT 148
V+LG QWL T
Sbjct: 318 VILGMQWLNT 327
>gi|356569674|ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
Length = 1433
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA----------KKVKNFIVN--- 117
+G+ ET R+ G I + VL+DSGSTHNF+ A ++ + N
Sbjct: 342 SGLPTPETFRLFGYINHTRITVLIDSGSTHNFLQPRLATFLHLPTVPTNPLRVLVGNGAV 401
Query: 118 -----------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ LQ + + F+L + G DV+LG QWL+ L PI D+ S
Sbjct: 402 LTCTHLCPDTTISLQSHHFTLTFHLLPISGADVILGIQWLKLLGPITTDYTS 453
>gi|242095932|ref|XP_002438456.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
gi|241916679|gb|EER89823.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
Length = 1414
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 15 PVRGLSRAELQERRAKVCATIATKSFPRDIGE--RSCFFMEACVKVEDGDV-----IMEV 67
P R LS E ERR + + R R F++E V++++G + +
Sbjct: 262 PPRRLSTEEQAERRRLGICYNCNEPYSRGHNRVCRRIFYIEG-VELDEGAAAEEAPVFSL 320
Query: 68 DENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQ---GVY 124
AGV + T+++ +G I L+D+GSTH+FI + A++ L ++ G+
Sbjct: 321 HAVAGVPGTNTIQLRVTVGAAEFIALIDTGSTHSFIGEDAARR-----TGLTIEPRPGLT 375
Query: 125 VIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
V GYDVVLGT W+ L I W+ +
Sbjct: 376 ATV------ANGYDVVLGTNWMAPLGDITWNLTA 403
>gi|147784790|emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
Length = 793
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDT--------------FAKKVKNFI-- 115
G +T+RI +IG +VL+DSGSTHNFIS+ F KV N
Sbjct: 297 GWSTPKTMRITAKIGQHEVVVLIDSGSTHNFISEKVADMLHLPVVPTKPFTVKVVNGTPL 356
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V++ILQG+ + L G D+VLG QWL L
Sbjct: 357 KCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQL 398
>gi|449470598|ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 1049
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 51/190 (26%)
Query: 10 RNSSIPVRGLSRAELQERRAK-VCATIATKSFP------RDIGERSCFFMEACVKVEDGD 62
+ S PV+ LS AE + R K +C + P +D E F M +ED D
Sbjct: 273 QKSEPPVKRLSDAEFRARLDKGLCFKCNERYSPGHRCKMKDKRELMLFIMNEEESLEDED 332
Query: 63 VIMEVDENA--------------------GVRASETLRINGRIGNISPIVLVDSGSTHNF 102
E +E G+ + T++I G I ++L+DSG+THNF
Sbjct: 333 RTEETNEEVLELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEVLILIDSGATHNF 392
Query: 103 ISDTFAKKVKNFIVN------------------------LILQGVYVIVDFNLRELEGYD 138
I + ++V + N L L+ + ++ DF EL D
Sbjct: 393 IHNKIVEEVGLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVD 452
Query: 139 VVLGTQWLRT 148
V+LG QWL T
Sbjct: 453 VILGMQWLNT 462
>gi|12322948|gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 65 MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK-------------- 110
+ V+ +G+ +T+ + G + +L+DSGSTHNFI T A K
Sbjct: 355 ISVNAVSGISGYKTMGVKGTVDKRDLFILIDSGSTHNFIDSTVAAKLGCHVESAGLTKVA 414
Query: 111 ------------VKNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+K F LQ D L L+G D+VLG QWL TL I W+F
Sbjct: 415 VADGRKLNVDGQIKGFTWK--LQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEF 470
>gi|147822176|emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]
Length = 480
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 24/130 (18%)
Query: 53 EACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
EA +++ D+++ ++ G+ + +T+RI+G I I+ +D ST NF+ K+ +
Sbjct: 201 EAENDIKEDDLMVSINAIFGLASHQTMRIHGNIKKKVVIIXIDLRSTXNFLDLVVXKRTR 260
Query: 113 NFI------------------------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRT 148
I +QG VD L L GYD+VLG QWL
Sbjct: 261 CLIQITNPMKAAVVDGTRITSDATYRQSTWNMQGKEFQVDLRLIPLGGYDMVLGIQWLAE 320
Query: 149 LEPILWDFAS 158
L PILWDF +
Sbjct: 321 LGPILWDFKN 330
>gi|147854459|emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
Length = 2232
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 46/189 (24%)
Query: 6 QTTCRNSSIPVRGLSRAELQERRAKVCATIATKSFP---------------RDIGERSCF 50
+T + IP++ L+ +ELQ RR K + F D E
Sbjct: 966 KTMSQRREIPIKRLTESELQARREKGLWFKCEEKFSPGHRCKKELRVLLVHEDEEEDDNQ 1025
Query: 51 FME------ACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFIS 104
F + A ++++D V + ++ G+ T++I G IG+ I+LVDSG+THNF+S
Sbjct: 1026 FDDRATEEPALIELKDA-VELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLS 1084
Query: 105 DTFAKKVKNFI------------------------VNLILQGVYVIVDFNLRELEGYDVV 140
+++ + V + +QG+ V+ DF EL DV+
Sbjct: 1085 LELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVI 1144
Query: 141 LGTQWLRTL 149
LG WL TL
Sbjct: 1145 LGMPWLGTL 1153
>gi|110289660|gb|AAP55181.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1459
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 36/181 (19%)
Query: 11 NSSIPVRGLSRAELQERRAKVCATI------ATKSFPRDIGERSCFFMEACVKVEDGDV- 63
+S P + S ++RR A A KS+ R G CF + E +V
Sbjct: 539 QASTPQKIFSPQITEDRRGTEAARARDDRLSALKSYRRSKG--LCFTCGEKWEQEIDEVG 596
Query: 64 -IMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV-------KN 113
+M + + A G +S ++R+ G + ++L+DSGSTH+F+ +T K+ K
Sbjct: 597 DLMSISQQAVWGTESSRSIRLIGWVQGTELLMLIDSGSTHSFMDETVGSKMVGVSPLRKP 656
Query: 114 FIVNLI-----------------LQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
V L +QG +F L L GYD++LG WL P+ D+
Sbjct: 657 LSVQLADGGSLLCSHEIANCKWWMQGHSFSSNFRLLNLGGYDIILGMDWLEQFSPMQVDW 716
Query: 157 A 157
+
Sbjct: 717 S 717
>gi|147775005|emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
Length = 1122
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 24/95 (25%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDT--------------FAKKVKNFI--------- 115
+RI +IG +VL+DSGSTHNFIS+ F KV N
Sbjct: 1 MRITAKIGQHEVVVLIDSGSTHNFISEKVADMLHLSVVPTKPFTVKVANGTPLKCQGRFE 60
Query: 116 -VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V++ILQG+ + L G D+VLG QWL L
Sbjct: 61 HVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQL 95
>gi|32489310|emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group]
Length = 3200
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 58 VEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK--- 112
V+ D +M + A G ++ ++R+ G + I ++LVDSGSTH+F+ K+
Sbjct: 1813 VQSDDSLMAISIQAINGTESNHSIRLRGWLQGIEVLMLVDSGSTHSFVDHQLGLKLTGVK 1872
Query: 113 ------------------NFIVN---LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEP 151
+ VN + QG++ +F L L YDV+LG WL P
Sbjct: 1873 SMASPARVKVADGGHLNCSLYVNNCDWLTQGIHFKSNFRLLSLGTYDVILGMDWLEQFSP 1932
Query: 152 ILWDF 156
+ D+
Sbjct: 1933 MKVDW 1937
>gi|147783182|emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
Length = 1360
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 25/111 (22%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA-----------KKVKNFIVN-- 117
AG +T+ + G++ N + +VL+D GSTHNFI +K + + N
Sbjct: 356 AGTEHPQTICVMGKLKNKNVMVLIDGGSTHNFIDQAIIVFKFGLPVIRDRKFEVMVANRE 415
Query: 118 ------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
L +QG V D+ + + +VLG QWL TL PI D+
Sbjct: 416 KIECAGQCRSLTLTIQGYSVTADYYILPVAACQLVLGVQWLETLGPIEMDY 466
>gi|449523988|ref|XP_004169005.1| PREDICTED: uncharacterized protein LOC101225033 [Cucumis sativus]
Length = 307
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 53/188 (28%)
Query: 15 PVRGLSRAELQERRAKVCATIATKSFPRD----IGERSCFFMEACVK------------- 57
P R LS AE Q RR K + + + D E+ M K
Sbjct: 85 PTRRLSDAEFQSRREKGLCFLCNEKYSHDHKCKAKEQRELRMILVTKEGEEFNIEEGGGN 144
Query: 58 ----------VEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISD 105
VE+ ++E+ N+ G+ T+++NG + I+LVD G+THN IS+
Sbjct: 145 EQSELNTIEVVEESHAVVELSINSVVGLSNPRTMKVNGWLQGKEVIILVDRGATHNLISE 204
Query: 106 TFAKKVK-------NF-----------------IVNLILQGVYVIVDFNLRELEGYDVVL 141
K+++ N+ V L++ VI +F EL G DV+L
Sbjct: 205 KLVKELQLNTKDTSNYAVILGSGTTIKGKGVCEAVELMIGDWRVIDEFLPLELGGVDVIL 264
Query: 142 GTQWLRTL 149
G QWL +L
Sbjct: 265 GMQWLYSL 272
>gi|147811718|emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]
Length = 1365
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 14 IPVRGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVEDGDV--------IM 65
+P+R LS ELQ RR + + + + FF+E + E+ +
Sbjct: 522 LPIRKLSPTELQRRRQQRLCYNCDEKYTMGHKCKKLFFIELEEENEESIEEEYVEETPTI 581
Query: 66 EVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK 109
+ AGV++ +T++I+ +IG +L+DSGSTHNF+ FAK
Sbjct: 582 SLHALAGVQSPQTMQIHSQIGKTPLTILIDSGSTHNFLHHKFAK 625
>gi|124359710|gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 60 DGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVN-- 117
DG++ M + G +++++ G I + +VLVDSG+THNFIS K+ +V+
Sbjct: 160 DGEMCMMEFFHLGHSRPQSIKLMGVIKEVPVVVLVDSGATHNFISQQLVHKMNWAVVDTP 219
Query: 118 ----------------------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
+ + V++ +D L +L G D+VLG +WLRTL
Sbjct: 220 CMSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIEWLRTL 273
>gi|356514101|ref|XP_003525745.1| PREDICTED: uncharacterized protein LOC100809540 [Glycine max]
Length = 1232
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------------------- 109
+G+ A ET R+ G + +LVD GSTHNF+ AK
Sbjct: 220 SGMPAPETFRVYGTVRRHQLTILVDGGSTHNFVQLRVAKFLGLPSTPMTPLPVMVGDGGV 279
Query: 110 ---KVKNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ V++ +QG D L G D+VLG QWLR L P+ D+ +
Sbjct: 280 IHCDCRYPQVSITIQGHQFTTDLFGLPLSGADLVLGVQWLRALGPVTTDYTA 331
>gi|449504804|ref|XP_004162299.1| PREDICTED: uncharacterized protein LOC101228789 [Cucumis sativus]
Length = 250
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 43/96 (44%), Gaps = 24/96 (25%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFISDTF-------AKKVKNF---------------- 114
T++I G I IVLVD G+THNFISD K N+
Sbjct: 26 TMKIRGEIQGKEVIVLVDCGATHNFISDKLVATLQLPTKDTSNYGVILGSGTAIKGKGVC 85
Query: 115 -IVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V L L G + DF EL G DV+LG QWL +L
Sbjct: 86 EQVKLNLNGWMITTDFLPLELGGVDVILGMQWLYSL 121
>gi|323134589|gb|ADX31265.1| unknown [Triticum aestivum]
Length = 1231
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 60 DGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVN 117
D DV+M + + A G T+R+ G+IG ++LVDSGS+H+F+SDT +++ I
Sbjct: 438 DEDVLMCISKGATTGQTTPRTVRLLGQIGGQEMLILVDSGSSHSFLSDTVVARLQLPIQA 497
Query: 118 LI------------------------LQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPIL 153
+ QG + D + L YD+++G WL + P+
Sbjct: 498 MSTVAVKIADGGTLSCSGVVPECRWKTQGHEFVTDLRVLALGCYDMIVGMDWLESCGPMW 557
Query: 154 WDFAS 158
D+++
Sbjct: 558 IDWSA 562
>gi|147772855|emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
Length = 1308
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 19 LSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVEDGDVIMEVDENA--GVRAS 76
L+R R + + A+I P ++G + + ++ +D E+ +A G
Sbjct: 164 LARQRRFARPSALRASIPEDETPEEMGGVNTTREISEIEEDDNGKEPEITLHALTGWIVP 223
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI--------------------- 115
T++I IG + L+DSGSTHNFISD + ++ +
Sbjct: 224 RTMQIKAIIGAHDVVALIDSGSTHNFISDRVVETLRLLVKPTTPFTVRVANGERLSCKGK 283
Query: 116 ---VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+ + LQG +DF L G D+VLG QWL TL ++ D+
Sbjct: 284 YEKLTVNLQGNEFHLDFFSVPLNGLDMVLGIQWLETLGSVVCDW 327
>gi|449501536|ref|XP_004161395.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 740
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 24/108 (22%)
Query: 65 MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFIS--------------DTFAKK 110
+E++ G+ + T+++ G I +VL+DSG+THNF+ TFA
Sbjct: 320 IELNTITGLTSKGTMKLRGEIEGREVVVLIDSGATHNFVHYKIIEEMKIPSEADTTFAAT 379
Query: 111 VKNFI----------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRT 148
+ + + + LQG+ V+ DF L EL D +LG QWL T
Sbjct: 380 IGDGTCCKGRGLCKRLEVKLQGITVVADFLLIELGNVDAILGMQWLDT 427
>gi|12039369|gb|AAG46155.1|AC018727_7 putative polyprotein [Oryza sativa Japonica Group]
Length = 431
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQGVYVIVDFNL 131
G +S ++R+ G + ++L+DSGSTH+F+ +T K + GV + L
Sbjct: 131 GTESSRSIRLIGWVQGTELLMLIDSGSTHSFMDETVGSK---------MVGVSPLRKPLL 181
Query: 132 RELEGYDVVLGTQWLRTLEPILWDFA 157
L GYD++LG WL P+ D++
Sbjct: 182 LNLGGYDIILGMDWLEQFSPMQVDWS 207
>gi|449526327|ref|XP_004170165.1| PREDICTED: uncharacterized protein LOC101232744 [Cucumis sativus]
Length = 426
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 13 SIPVRGLSRAELQERRAKVCA---------TIATKSFPRDIGERSCFFMEACVKVEDGDV 63
+I +RG AE+++ K A + T D E+S G V
Sbjct: 79 TITLRGAPAAEIKKEGHKCKAKELRELWMFVVKTDDIEEDEYEQSELKAMELQGEIGGVV 138
Query: 64 IMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTF-------AKKVKNF-- 114
+ ++ G+ T++I G I IVLVD G+THNFISD K N+
Sbjct: 139 ELCINSMVGLTNLGTMKIRGVIEGKEVIVLVDCGATHNFISDKLVMTLHIPTKDTSNYGE 198
Query: 115 ---------------IVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V L L G V DF EL G D++LG QWL +L
Sbjct: 199 ILGSGTTIKGKGVCEQVKLSLNGWTVTADFLPLELGGVDMILGMQWLYSL 248
>gi|32487926|emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]
Length = 1545
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK---VKNFIVNLILQGVYVIV 127
+G + + R+ G + + ++LVDSGS+H+FI ++ +++ V+ ++ ++G
Sbjct: 23 SGTESPISFRLRGWVQGVEVLMLVDSGSSHSFIDNSLSQQLQGVQQLPKSVSVKGHVFQS 82
Query: 128 DFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+F L YDV+LG WL L P+ D+ +
Sbjct: 83 EFKFLPLGTYDVILGMDWLMQLGPMNVDWTA 113
>gi|27764548|gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 44/198 (22%)
Query: 3 TTNQTTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFP-RDIGERSCFFMEACVKVED 60
+T RN +I + +S AE+Q RR K +C K P R ++ ED
Sbjct: 299 STKPFNLRNQNI--KKISPAEIQLRREKNLCYFCDEKFSPAHKCPNRQVMLLQLEETDED 356
Query: 61 --GDVIMEVDE------------NA--GVRASETLRINGRIGNISPIVLVDSGSTHNFIS 104
+ +M +E NA G T+R G++G I+ +LVD GS+ NFI
Sbjct: 357 QTDEQVMVTEEANMDDDTHHLSLNAMRGSNGVGTIRFTGQVGGIAVKILVDGGSSDNFIQ 416
Query: 105 DTFAKKVK-------NFIV-----------------NLILQGVYVIVDFNLRELEGYDVV 140
A+ +K N V L +QG V V L ++ G DV+
Sbjct: 417 PRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVI 476
Query: 141 LGTQWLRTLEPILWDFAS 158
LG+ WL TL P + D+A+
Sbjct: 477 LGSTWLATLGPHVADYAA 494
>gi|38346427|emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
Length = 1817
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 26/126 (20%)
Query: 53 EACVKVEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK 110
E + ED +M + + A G + + R+ G + ++LVDSGSTH+F+ ++ K
Sbjct: 569 EQFLHCEDTSDLMAISQQAIWGTESPNSFRLRGWVQGTELLMLVDSGSTHSFMEESIGLK 628
Query: 111 V-------KNFIVNLI-----------------LQGVYVIVDFNLRELEGYDVVLGTQWL 146
+ V L +QG I +F L L GYD++LG WL
Sbjct: 629 LAGVKPLRSKLSVKLADGETLSCSYEVTNCRWWMQGHNFINNFRLLNLGGYDIILGMDWL 688
Query: 147 RTLEPI 152
P+
Sbjct: 689 EQFSPM 694
>gi|12322951|gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arabidopsis thaliana]
Length = 368
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 27/140 (19%)
Query: 43 DIGERSCFFMEACVKVEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTH 100
D G+ ME V++E ++ + NA GV T+R+ G +L+D STH
Sbjct: 172 DSGKMEEVHMEK-VELEKTGIVAHISVNAISGVSDYRTMRVKGLYEKQVLSILIDPDSTH 230
Query: 101 NFISDTFAKKVK---------------------NFIVNLI---LQGVYVIVDFNLRELEG 136
+F+ A+K+K N ++ L+G + D + L G
Sbjct: 231 SFMDSKVAEKLKCVLKPASMAQVSVADGRLLGLNAKIDKFQWELRGTQLQADLMVITLRG 290
Query: 137 YDVVLGTQWLRTLEPILWDF 156
D+VLG QWL TL PI DF
Sbjct: 291 CDMVLGAQWLETLGPITCDF 310
>gi|326497069|dbj|BAK02119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 24/106 (22%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQGVYVI---- 126
+G A T+R+ ++G+ + L+DSGSTH+F+S FA ++ +V L V++
Sbjct: 41 SGEEAPSTIRLRAQVGDQVMLFLIDSGSTHSFVSKAFATRLSVPMVTLPAVSVHMANSQR 100
Query: 127 --------------------VDFNLRELEGYDVVLGTQWLRTLEPI 152
D + EL YD VLG WL P+
Sbjct: 101 LRCDSMVQQLTWQVPGHTFHTDLRVLELGAYDGVLGMDWLSRHSPM 146
>gi|9294238|dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
Length = 904
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 67 VDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQGVYV- 125
V+ +G+ T+R+ G N +L+DSGST NFI T AKK+ + L V V
Sbjct: 222 VNAVSGISDYTTMRVKGMYDNKILFILIDSGSTFNFIDSTMAKKLGCKVEPTGLTRVSVA 281
Query: 126 ----------IVDFNLR-------------ELEGYDVVLGTQWLRTLEPILWDF 156
I DF + L+ D+VLG QWL TL I W+F
Sbjct: 282 DGRKLRVDGKITDFTWKLQTTSFASDILMIPLQVIDMVLGVQWLATLGRISWEF 335
>gi|147838975|emb|CAN68101.1| hypothetical protein VITISV_042364 [Vitis vinifera]
Length = 566
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDT--------------FAKKVKNFI-- 115
G +T+RI +I +VL+DSGSTHNFIS+ F KV N
Sbjct: 315 GWSTPKTMRITTKIAQHEVVVLIDSGSTHNFISEKVAYMLHLPVVPTKPFTVKVANGTPL 374
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V++ILQG+ + L D+VLG QWL L
Sbjct: 375 KCQWRFEHVHVILQGIPFSLTLYSLPLTXLDLVLGVQWLEQL 416
>gi|449479800|ref|XP_004155711.1| PREDICTED: uncharacterized protein LOC101230021 [Cucumis sativus]
Length = 1480
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 24/118 (20%)
Query: 56 VKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK--- 112
++ E V + ++ G+ T+++ G++ IVL+D G+THNFIS++ ++++
Sbjct: 1197 IQEEHAVVELSINSVVGLSNPGTMKVKGKLLGREIIVLIDCGATHNFISESLVEELQIST 1256
Query: 113 ----NF-----------------IVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
N+ + +++ VI DF L EL G D +LG QWL +L
Sbjct: 1257 KSTTNYGVILGSGTAIKGKGVCEAIEMMIGEWRVIDDFLLLELGGVDAILGMQWLYSL 1314
>gi|12324281|gb|AAG52110.1|AC023064_3 hypothetical protein; 60873-62443 [Arabidopsis thaliana]
Length = 508
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 27/140 (19%)
Query: 43 DIGERSCFFMEACVKVEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTH 100
D G+ ME V++E ++ + NA GV T+R+ G +L+D STH
Sbjct: 312 DSGKMEEVHMEK-VELEKTGIVAHISVNAISGVSDYRTMRVKGLYEKQVLSILIDPDSTH 370
Query: 101 NFISDTFAKKVKNFI------------------------VNLILQGVYVIVDFNLRELEG 136
+F+ A+K+K + L+G + D + L G
Sbjct: 371 SFMDSKVAEKLKCVLKPASMAQVSVADGRLLGLNAKIDKFQWELRGTQLQADLMVITLRG 430
Query: 137 YDVVLGTQWLRTLEPILWDF 156
D+VLG QWL TL PI DF
Sbjct: 431 CDMVLGAQWLETLGPITCDF 450
>gi|147786921|emb|CAN64438.1| hypothetical protein VITISV_011230 [Vitis vinifera]
Length = 361
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 1 MPTTNQTTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFPRDIGER----SCFFMEAC 55
+PTT + + PV+ LS E+Q+RRA+ +C KS G R +E
Sbjct: 210 LPTTTKAS------PVKRLSWEEMQKRRAQGLCFNCDDKSTS---GHRCKGPQLLLLEGN 260
Query: 56 VKVEDGDVIMEVDEN------------AGVRASETLRINGRIGNISPIVLVDSGSTHNFI 103
+ + E + + G A++T+R+ +IG +VL+DSGSTHNFI
Sbjct: 261 INDDSEGDTKEAEADLPSDPEISLHALTGWTATKTMRVTAKIGTHDIVVLIDSGSTHNFI 320
Query: 104 SDTFA 108
SD A
Sbjct: 321 SDKVA 325
>gi|449526146|ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232562, partial [Cucumis
sativus]
Length = 497
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 26/118 (22%)
Query: 58 VEDGDVIMEVDENAGVRASE--TLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK--- 112
+++ ++E+ N+ VR S T+++ G++ IVLVD G+THNFIS++ ++++
Sbjct: 38 IQEEQTVVELSINSVVRLSNPGTMKVKGKLLGKEIIVLVDCGATHNFISESLVEELQIST 97
Query: 113 ----NF-----------------IVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
NF + +I+ VI DF EL D +LG QWL +L
Sbjct: 98 KSTTNFGVILGSGTAIKGKGVCEAIEMIIGEWRVIDDFLPLELGSVDAILGMQWLYSL 155
>gi|147770944|emb|CAN69535.1| hypothetical protein VITISV_013569 [Vitis vinifera]
Length = 617
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 39/189 (20%)
Query: 1 MPTTNQTTCRNSSIPVRGLSRAELQERRAK-VCATIATK--SFPRDIGERSCFFMEACVK 57
+PTT++ + V+ LS E+Q RRAK +C K S R G + +
Sbjct: 139 LPTTSKAS------HVKRLSWEEMQRRRAKGLCFNYDDKFTSAHRCKGPQILLLEGSIDD 192
Query: 58 VEDGDVI-----MEVDENAGVRA-SETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV 111
+GD+ + D + A + +IG +V +DSGSTHNFISD A +
Sbjct: 193 DSEGDIKEAKTDIPSDPEISLHALTGWTTAKTKIGTHDIVVFIDSGSTHNFISDKVAALL 252
Query: 112 KNFIV------------------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLR 147
+V +++LQG+ + F L D+VLG QWL
Sbjct: 253 HLLVVPTAPFHVRVANDQPLKCQGRFHNIHILLQGIPFSITFYSLPLTSLDLVLGVQWLE 312
Query: 148 TLEPILWDF 156
L ++ D+
Sbjct: 313 QLGSVVCDW 321
>gi|449531517|ref|XP_004172732.1| PREDICTED: uncharacterized protein LOC101232451 [Cucumis sativus]
Length = 392
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 24/120 (20%)
Query: 54 ACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK- 112
A VE+ ++ + ++ G+ S T+++ G+I +VL+D G+TH+FI D +K
Sbjct: 29 AIGNVENLNIELSINSVVGLSNSGTMKVKGKIQGTEVVVLIDCGATHSFIVDNLVTSLKL 88
Query: 113 ------NFIVNL----------------ILQGVYVIVD-FNLRELEGYDVVLGTQWLRTL 149
N V L ++ G + IVD F ELEG DV+L QWL +L
Sbjct: 89 PLTETSNCGVILGSGAAVKGKGICGQVEVMVGEWKIVDSFLPLELEGVDVILDMQWLHSL 148
>gi|449457325|ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
Length = 718
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 55 CVKVEDGD-VIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTF---- 107
CV++ D I+E+ N+ G+ T+++ G+I + I+L+D G+THNFISD
Sbjct: 363 CVEINPEDQAIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQEL 422
Query: 108 ------------------AKKVKNFI--VNLILQGVYVIVDFNLRELEGYDVVLGTQWLR 147
A K K + L L+G V +F EL G D VLG QWL
Sbjct: 423 SLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLGMQWLY 482
Query: 148 TL 149
+L
Sbjct: 483 SL 484
>gi|77551695|gb|ABA94492.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 306
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 27/111 (24%)
Query: 73 VRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK-----------------NFI 115
V T+R+ I + + L+DSGSTHNFI A ++ + I
Sbjct: 178 VGGDNTMRLPVMIDGLRVVSLIDSGSTHNFIHTELAHHLRLRLEPVRDGLRVVVANGDRI 237
Query: 116 VN--------LILQGVYVIVDFNLRELEGYDVVLGTQW--LRTLEPILWDF 156
V+ L++ G VD +L D++LGT+W L+TL P+LWDF
Sbjct: 238 VSPGRCHNLPLLIDGEIFRVDCFALDLCAVDIILGTEWLQLQTLGPVLWDF 288
>gi|449472371|ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
sativus]
Length = 764
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 55 CVKVEDGD-VIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTF---- 107
CV++ D I+E+ N+ G+ T+++ G+I + I+L+D G+THNFISD
Sbjct: 390 CVEINPEDQAIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQEL 449
Query: 108 ---AKKVKNFIV-----------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLR 147
K ++ V L L+G V +F EL G D VLG QWL
Sbjct: 450 SLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLGMQWLY 509
Query: 148 TL 149
+L
Sbjct: 510 SL 511
>gi|449450213|ref|XP_004142858.1| PREDICTED: uncharacterized protein LOC101220049 [Cucumis sativus]
Length = 250
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 24/96 (25%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFISDTF-------AKKVKNF---------------- 114
T++I G I IVLVD G+T NFISD K N+
Sbjct: 26 TMKIRGEIQGKEVIVLVDCGATQNFISDKLVATLQLPTKDTSNYGVILGSGTAIKGKGVC 85
Query: 115 -IVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V L L G + DF EL G DV+LG QWL +L
Sbjct: 86 EQVKLNLNGWMITTDFLPLELGGVDVILGMQWLYSL 121
>gi|449524806|ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
Length = 703
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI---------------- 115
G + +T++I G I N +VLVD G+ HNFIS+ K++K +
Sbjct: 310 GFSSPKTIKIKGEIRNCEVVVLVDGGAIHNFISEEVVKELKIPVETLDAYGVVLGTGGVV 369
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
VNL + + + DF L DV LG WL TL +++++
Sbjct: 370 RATGMCKSVNLTIVNLSITHDFLPLPLGSADVNLGVTWLETLGKVIFNY 418
>gi|387965727|gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 60/203 (29%)
Query: 4 TNQTTCRNSSIP---------VRGLSRAELQERRAK-VCATIATKSFPRDIG------ER 47
+QT+ N+ P +R L+ ELQE+RAK +C K +G E
Sbjct: 379 ASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKW---GVGHQCRRKEL 435
Query: 48 SCFFMEACVKVE-DG-------------DVIMEVDENA--GVRASETLRINGRIGNISPI 91
S FME + E +G ++ EV N+ G+ +T++++G I N +
Sbjct: 436 SVLFMEDNEEDELEGALSGSEAPPSPTEEIPPEVSLNSVIGLSNPKTMKLSGLIDNHEVV 495
Query: 92 VLVDSGSTHNFISDTFAKKV-------KNFIVNL------------------ILQGVYVI 126
V++D G+THNF+S K+ + F V+L + G+ V+
Sbjct: 496 VMIDPGATHNFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRGTGICRAVALYLDGGLVVV 555
Query: 127 VDFNLRELEGYDVVLGTQWLRTL 149
DF L DV+LG QWL TL
Sbjct: 556 EDFLPLGLGNSDVILGVQWLETL 578
>gi|52353389|gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1263
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 65 MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------------K 110
M V G + T+R+ G+I ++ ++LVDSGS+ +F+SD A K
Sbjct: 454 MSVHAVQGTDSQSTIRLQGKIQGLNILMLVDSGSSASFVSDQLADRLTGVQFLAHPLSVK 513
Query: 111 VKNFIV----------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
V N V + G + F + L GYD +LG WL P+ D+
Sbjct: 514 VANGQVLHCQKEMPSAEWFVSGQKFLTTFKVVALGGYDAILGMDWLTKYSPMHIDW 569
>gi|10140673|gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 26/121 (21%)
Query: 62 DVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV-------- 111
D +M + A G +S+++R+ G + N ++LVDSGSTH+FI ++
Sbjct: 420 DSLMAISFQALNGTDSSKSIRLRGWVQNTELLMLVDSGSTHSFIDAKLGAQLCGLQKLNQ 479
Query: 112 --------------KNFIVNLIL--QGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWD 155
+F+ N QG DF L L YD +LG WL P+ D
Sbjct: 480 AIKVQVADGSQLFCDSFLPNCSWWSQGHSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVD 539
Query: 156 F 156
+
Sbjct: 540 W 540
>gi|57863925|gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 2108
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 24/116 (20%)
Query: 65 MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------------K 110
M V G + T+R+ G+I ++ ++LVDSGS +FISD A K
Sbjct: 1154 MSVHAVQGTDSQSTIRLQGKIQGLNILMLVDSGSLASFISDQLADRLTGVQFLAHPLSVK 1213
Query: 111 VKNFIV----------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
V N V + G + F + L GYD +LG WL P+ D+
Sbjct: 1214 VANGQVLHCQKEMPSAEWFVSGQKFLTTFKVVALGGYDAILGMDWLTKYSPMQIDW 1269
>gi|110289541|gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1477
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 32/122 (26%)
Query: 63 VIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLIL 120
++M + + A G + ++R+ G I ++L+DSGS+H+FI + K + V L+
Sbjct: 406 IVMAISQQALNGTESRNSIRLRGWIQGTELLMLIDSGSSHSFIDEKIGKSMSG--VKLLT 463
Query: 121 QGVYVIV--------------------------DFNLRELEGYDVVLGTQWLRTLEP--I 152
+ + V + DF L L GYD++LG WL P I
Sbjct: 464 KPLKVQIADGGELVCSQVIPNCSWWTQGHNFSNDFKLIPLGGYDIILGMDWLEQYSPMKI 523
Query: 153 LW 154
W
Sbjct: 524 YW 525
>gi|147807720|emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
Length = 1448
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 24/95 (25%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI----------------------- 115
++I G IG+ I+LVDSG+THNF+S +++ +
Sbjct: 1 MKIKGMIGSKEVIILVDSGATHNFLSLELVQQLALPLTTTTSYEVMMGTGISVKGKGICR 60
Query: 116 -VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V + +QG+ V+ DF EL DV+LG WL TL
Sbjct: 61 GVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTL 95
>gi|18568269|gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISD----------TFAKKVKNFIVN---- 117
G +TL++NG I N ++L+DSGS+H F++D + A ++ + N
Sbjct: 448 GSTGRQTLKLNGSIQNHPLLILIDSGSSHTFLNDQLRPHLQGVTSMASTLQVQVANGAMV 507
Query: 118 ----LILQGVYVI------VDFNLRELEGYDVVLGTQWLRTLEPILWDFA 157
+LQ + I D + L YD+V+G WL + P+ D+A
Sbjct: 508 TCHYKLLQAQWQIQNCSFTSDVSFLPLPYYDMVVGMDWLESFSPMRVDWA 557
>gi|261865347|gb|ACY01928.1| hypothetical protein [Beta vulgaris]
Length = 1583
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI---------------- 115
G+ + +TL++ G I IV+VD G+THNFIS ++++ I
Sbjct: 413 GISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVSLGTGAEA 472
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
V L LQGV V+ D+ L D++LG QWL L
Sbjct: 473 HGQGECKAVPLHLQGVCVMEDYLPLTLGNSDLILGVQWLEKL 514
>gi|449465222|ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 55 CVKVEDGD-VIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTF---- 107
CV++ D I+E+ N+ G+ +T+++ G+I + I+L+D G+THNFISD
Sbjct: 1303 CVEINPEDQAIVELSINSVVGLTNPKTMKVRGKIKDREVIILIDCGATHNFISDKVVQEL 1362
Query: 108 ------------------AKKVKNFI--VNLILQGVYVIVDFNLRELEGYDVVLGTQWLR 147
A K K + L L+G V +F EL G D VL QWL
Sbjct: 1363 SLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLEMQWLY 1422
Query: 148 TL 149
+L
Sbjct: 1423 SL 1424
>gi|147802351|emb|CAN77123.1| hypothetical protein VITISV_013625 [Vitis vinifera]
Length = 439
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 24/105 (22%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFISDTFA----------KKVKNFIVN---------- 117
TLR+ GR+ N VL+D +THNFI KK++ + N
Sbjct: 274 TLRVLGRLKNKYLTVLIDDNNTHNFIDQIVVSRFGLLVVREKKIQVVVANQEWIECMGQF 333
Query: 118 ----LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
LI+Q + V D+ + + VVLG QWL TL I D+ +
Sbjct: 334 LGLTLIIQEIPVTADYYILPMAACQVVLGVQWLETLGSIESDYKA 378
>gi|116309424|emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 24/111 (21%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFI----------------------SDTFAK 109
G +S T+++ G I ++ ++LVDSGSTH+FI +D
Sbjct: 415 GTESSRTIKLRGWIQDMELLMLVDSGSTHSFIDSEVSLRLPGVHKLQTPLTVRIADGGTM 474
Query: 110 KVKNFI--VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
K + I N +QG F + L YD++LG WL P+ D+A+
Sbjct: 475 KCTHEISSCNWWMQGNQFCNSFRVLPLGNYDIILGMDWLELFSPMQVDWAN 525
>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2726
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 29/131 (22%)
Query: 43 DIGERSCFFMEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNF 102
D GE FF EA ++ + ++ GV + +T ++ G+I IV++DSG++HNF
Sbjct: 1555 DDGEE--FFFEAQMQ---ELCTLSLNSYLGVGSPKTTKLYGKIQKTDVIVMLDSGASHNF 1609
Query: 103 ISDTFAKKVKNFI------------------------VNLILQGVYVIVDFNLRELEGYD 138
I+ + K+K + V+ L DF EL D
Sbjct: 1610 ITPSIVTKLKLKVCAETSFDILLGNGASVNSLGVCREVSFQLADATFTSDFIALELGMVD 1669
Query: 139 VVLGTQWLRTL 149
V+LG QWL TL
Sbjct: 1670 VILGIQWLETL 1680
>gi|218199564|gb|EEC81991.1| hypothetical protein OsI_25921 [Oryza sativa Indica Group]
Length = 426
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 24/109 (22%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK------------------- 112
G T+R+ G + N +VLVDSGS NF+S+ K++
Sbjct: 224 GTTGKRTIRLQGLLQNQEILVLVDSGSFSNFLSEQLVSKLQLPTQTSAPSQVTIADGGKI 283
Query: 113 ---NFIVNL--ILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+ NL QG D + L YD++LG +WL P+ D+
Sbjct: 284 LCNQVVANLEWWCQGHTFSTDLKVLSLGSYDMILGMEWLEDFSPMWIDW 332
>gi|224133300|ref|XP_002321533.1| predicted protein [Populus trichocarpa]
gi|222868529|gb|EEF05660.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 24/99 (24%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKKV------KNFIVNLIL-------QGVYV 125
+R+ ++GN++ I L+D GSTH F+ K++ + F+ ++ +G Y
Sbjct: 126 MRVRAKVGNLTIIPLIDIGSTHYFVPSKMTKRMGIEISAQRFMRVKVVDDTEINSEGEYA 185
Query: 126 IVDFNLRE-----------LEGYDVVLGTQWLRTLEPIL 153
F ++ L GYDVVLG QWL+ L IL
Sbjct: 186 DFKFKIQRNHFVSQAIVLPLGGYDVVLGIQWLQELGSIL 224
>gi|242085390|ref|XP_002443120.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
gi|241943813|gb|EES16958.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
Length = 1574
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV----------KNFIVN--- 117
AG+R T+ + + + L+D+GSTHNF+ T +++ + + N
Sbjct: 539 AGIRTENTMLLPVLVKGERLLALLDTGSTHNFLRGTTMRRLGLSPAGGEQLRVTVANGDR 598
Query: 118 LILQGVYVIVDFNLR-----------ELEGYDVVLGTQWLRTLEPILWDFAS 158
L +G+ V ++ +L +D++LG +LRTL PILWDF +
Sbjct: 599 LPCEGIAHDVPISIAGEVFSITCVGLDLGSFDLILGVDYLRTLGPILWDFGA 650
>gi|242085388|ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
gi|241943812|gb|EES16957.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
Length = 1595
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV----------KNFIVN--- 117
AG+R T+ + + + L+D+GSTHNF+ T +++ + + N
Sbjct: 539 AGIRTENTMLLPVLVKGERLLALLDTGSTHNFLRGTTMRRLGLSPAGGEQLRVTVANGDR 598
Query: 118 LILQGVYVIVDFNLR-----------ELEGYDVVLGTQWLRTLEPILWDFAS 158
L +G+ V ++ +L +D++LG +LRTL PILWDF +
Sbjct: 599 LPCEGIAHDVPISIAGEVFSITCVGLDLGSFDLILGVDYLRTLGPILWDFGA 650
>gi|147810501|emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 1 MPTTNQ-TTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFPRDIGERSCFF------- 51
+P TN T RN R S +L ERRAK +C K P +R +
Sbjct: 344 IPKTNPGITTRNH----RNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVE 399
Query: 52 -----------MEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTH 100
ME K ED + + ++ S+T+ +NG S VL+DSGS+H
Sbjct: 400 TDGEGPEGNLQMEGLGK-EDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLIDSGSSH 458
Query: 101 NFISDTFAKKV 111
NF+S AK+V
Sbjct: 459 NFLSSKVAKRV 469
>gi|208609055|dbj|BAG72150.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 31/128 (24%)
Query: 60 DGDVIME-------VDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
DG+ ++E ++ G+ ++ + ++ G+IGN ++L+D G+T NFIS +++
Sbjct: 399 DGEFVLEGKVLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATSNFISQDLVVELE 458
Query: 113 -------NFIV-----------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRT 148
++V L +QG+ ++ F + L G +VVLG WL +
Sbjct: 459 IPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLAS 518
Query: 149 LEPILWDF 156
L I +F
Sbjct: 519 LGNIEANF 526
>gi|208609051|dbj|BAG72148.1| hypothetical protein [Lotus japonicus]
gi|208609062|dbj|BAG72153.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 31/128 (24%)
Query: 60 DGDVIME-------VDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
DG+ ++E ++ G+ ++ + ++ G+IGN ++L+D G+T NFIS +++
Sbjct: 399 DGEFVLEGKVLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATSNFISQDLVVELE 458
Query: 113 -------NFIV-----------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRT 148
++V L +QG+ ++ F + L G +VVLG WL +
Sbjct: 459 IPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLAS 518
Query: 149 LEPILWDF 156
L I +F
Sbjct: 519 LGNIEANF 526
>gi|208609057|dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 31/128 (24%)
Query: 60 DGDVIME-------VDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
DG+ ++E ++ G+ ++ + ++ G+IGN ++L+D G+T NFIS +++
Sbjct: 399 DGEFVLEGKVLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATSNFISQDLVVELE 458
Query: 113 -------NFIV-----------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRT 148
++V L +QG+ ++ F + L G +VVLG WL +
Sbjct: 459 IPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLAS 518
Query: 149 LEPILWDF 156
L I +F
Sbjct: 519 LGNIEANF 526
>gi|147837833|emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
Length = 1357
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 23/130 (17%)
Query: 1 MPTTNQ-TTCRNSSIPVRGLSRAELQERRAK-VCATIATKSFP-RDIGERSCFFMEACVK 57
+P TN T RN R S +L ERRAK +C K P + + M+ V+
Sbjct: 252 IPKTNPGITTRNH----RNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVE 307
Query: 58 VE----DGDVIMEV--DENAGVRAS----------ETLRINGRIGNISPIVLVDSGSTHN 101
+ +G++ ME +E+ ++ S +T+ +NG S VL+DSGS+HN
Sbjct: 308 TDGEGPEGNLQMEGLGEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLIDSGSSHN 367
Query: 102 FISDTFAKKV 111
F+S AK+V
Sbjct: 368 FLSSKVAKRV 377
>gi|225016150|gb|ACN78974.1| retrotransposon protein [Glycine max]
gi|225016158|gb|ACN78981.1| retrotransposon protein [Glycine max]
Length = 1261
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 21/171 (12%)
Query: 2 PTTNQTTCRNSSIPVRGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVEDG 61
PT TT +IP + LS EL RR K + + R F+ ED
Sbjct: 354 PTKPATT----TIPFKCLSPEELAIRREKGLCFNYDEKYSRGHKCTPSLFL---FVTEDE 406
Query: 62 DVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVN---- 117
+ + + D N + IS L G+ F+ ++ + N
Sbjct: 407 ECLQDSDSNPSSPTALVASQETSPAQISLHALSGHGAPETFLQPQTTSTLRVTVGNGEEL 466
Query: 118 ----------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ +Q +VDF++ + G DVVLG QWL++L P+L D+A+
Sbjct: 467 QCNQVCPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSLGPVLTDYAT 517
>gi|147799941|emb|CAN70500.1| hypothetical protein VITISV_020483 [Vitis vinifera]
Length = 672
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 30/114 (26%)
Query: 63 VIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLI--- 119
V + ++ G+ S T++I G IG+ I+LVD G TH+F+ F V+ + L
Sbjct: 129 VELSLNXMVGLTTSRTMKIKGTIGSNEXIILVDYGVTHDFL---FLDLVQRLALPLTTTT 185
Query: 120 ------------------------LQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
+QG+ V+ DF EL DV+LG WL TL
Sbjct: 186 SYGVVMGIGISMKGKSICKGVCISMQGLIVVEDFVPLELGSTDVILGMPWLGTL 239
>gi|3810596|gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 945
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTF-------AKKVKNFIVN------- 117
GV + T+R+ I I L++SGSTHNFI + A K F V
Sbjct: 311 GVDTTSTIRVRATIHRNRLIALINSGSTHNFIGEKAVRGMNLKATTTKPFTVRVVNGMPL 370
Query: 118 ----------LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPIL 153
+++ GV V L G D+ +G QWL TL P L
Sbjct: 371 VCRSRYEAIPVVMGGVVFPVTLYALPLMGLDLAMGVQWLSTLGPTL 416
>gi|77551464|gb|ABA94261.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1369
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 6 QTTCRNSSIPVRGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVEDGDVIM 65
+T + + V + + Q R +C A K P C V++ IM
Sbjct: 294 ETEIKRGTNSVDKIGALKAQRRAQGLCYLCAEKWSP----THKCANTVQLHAVQELFTIM 349
Query: 66 EVDENAGVRASE---TLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV----------- 111
+ +A +R SE ++R+ G+I ++LVDSGST +FIS A +
Sbjct: 350 AISVHA-MRGSEHRGSMRMLGQIQGKEILILVDSGSTASFISKKLAAGLVGVQGLPTKVQ 408
Query: 112 -----------KNFIVNL--ILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
++ I N + QG DF + L YDV+LG WL P+ D+++
Sbjct: 409 VKVADGAVLHCQSVIQNCEWVSQGHMFCTDFKVLALGNYDVILGMDWLMQHSPMTVDWST 468
>gi|6466937|gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 24/97 (24%)
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAK-------KVKNFIVN------------ 117
+++++ G IGN ++LVDSG+T NFIS+ + + ++F V
Sbjct: 511 QSMKMRGYIGNTKVVLLVDSGATCNFISEALVREKGWLVTQTRSFGVKVGGGRIIKSSGK 570
Query: 118 -----LILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
L +QG+ + D+ L +L D+VLG WL L
Sbjct: 571 CVDIPLEVQGIEFVQDYYLFDLGDLDLVLGFSWLAGL 607
>gi|78183249|emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 25/121 (20%)
Query: 60 DGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNL- 118
GD I +D G +R+ G +G VL+D+GSTHNFI+ + + I L
Sbjct: 360 HGDSI-SLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQ 418
Query: 119 ----------ILQGV------------YVIVDFNLR-ELEGYDVVLGTQWLRTLEPILWD 155
I+QG Y D + L D++LG QWLR I WD
Sbjct: 419 PVKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWD 478
Query: 156 F 156
F
Sbjct: 479 F 479
>gi|78183243|emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 61 GDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNL-- 118
GD I +D G +R+ G +G VL+D+GSTHNFI+ + + I L
Sbjct: 361 GDSI-SLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQP 419
Query: 119 ---------ILQGV------------YVIVDFNLR-ELEGYDVVLGTQWLRTLEPILWDF 156
I+QG Y D + L D++LG QWLR I WDF
Sbjct: 420 VKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDF 479
>gi|78183241|emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 61 GDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNL-- 118
GD I +D G +R+ G +G VL+D+GSTHNFI+ + + I L
Sbjct: 361 GDSI-SLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQP 419
Query: 119 ---------ILQGV------------YVIVDFNLR-ELEGYDVVLGTQWLRTLEPILWDF 156
I+QG Y D + L D++LG QWLR I WDF
Sbjct: 420 VKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDF 479
>gi|78183245|emb|CAJ00275.1| hypothetical protein [Lotus japonicus]
Length = 1112
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 25/120 (20%)
Query: 61 GDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNL-- 118
GD I +D G +R+ G +G VL+D+GSTHNFI+ + + I L
Sbjct: 361 GDSI-SLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQP 419
Query: 119 ---------ILQGV------------YVIVDFNLR-ELEGYDVVLGTQWLRTLEPILWDF 156
I+QG Y D + L D++LG QWLR I WDF
Sbjct: 420 VKITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDF 479
>gi|449496938|ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232747 [Cucumis sativus]
Length = 701
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 24/109 (22%)
Query: 62 DVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK-------NF 114
D +E+ GV + T+++ G + ++L+DSG+T+NFIS +++ F
Sbjct: 285 DTPIELRLITGVTSKGTMKLKGHVNGKEVVILIDSGATNNFISQVLVDELQLSIDPGTRF 344
Query: 115 IVNL-----------------ILQGVYVIVDFNLRELEGYDVVLGTQWL 146
VN+ L+ + ++ DF EL D+VLG QWL
Sbjct: 345 GVNIGNGTRCEGRGICKRVKVKLKELTIVADFLAVELGKVDLVLGMQWL 393
>gi|224109270|ref|XP_002333289.1| predicted protein [Populus trichocarpa]
gi|222835888|gb|EEE74309.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 12 SSIPVRGLSRAELQERRAK-VCATIATKSFPRDIGERSCFFM---EACVKVEDGDVIMEV 67
+++P++ L+ E+Q+RR++ +C K P ++ + + ++D D E
Sbjct: 272 AAMPMKRLAWDEMQKRRSQGICFNCDEKFTPGHKCQKPRLLLLEGDDETSLQD-DEEFEG 330
Query: 68 DEN-------AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA 108
DE G + T+RI RI N VL+DSGSTHNFIS+ A
Sbjct: 331 DEPQISLHAITGWSIARTMRIMARIENQDLTVLIDSGSTHNFISERIA 378
>gi|208609049|dbj|BAG72147.1| hypothetical protein [Lotus japonicus]
gi|208609053|dbj|BAG72149.1| hypothetical protein [Lotus japonicus]
Length = 1520
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 25/124 (20%)
Query: 58 VEDGDVI-MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK---- 112
V +G V+ + ++ G+ ++ + ++ G+IGN ++L+D G+T NFIS +++
Sbjct: 365 VLEGKVLQLSLNSKEGLTSNRSFKVKGKIGNREVLILIDCGATINFISQDLVVELEIPVI 424
Query: 113 ---NFIV-----------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPI 152
++V L +QG+ ++ F + L G +VVLG WL +L I
Sbjct: 425 ATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNI 484
Query: 153 LWDF 156
+F
Sbjct: 485 EANF 488
>gi|224132328|ref|XP_002321312.1| predicted protein [Populus trichocarpa]
gi|222862085|gb|EEE99627.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 26/106 (24%)
Query: 75 ASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI------------------- 115
A T+RI G ++L+DSGSTHNFI + A +++ I
Sbjct: 276 AHNTIRIRGNYHGRELVILIDSGSTHNFIDEHIAGELQISIERSLVLTVTIANGSTILCD 335
Query: 116 -----VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+Q +VD + +L DVVLG WL + +L+DF
Sbjct: 336 SYTTEFKWFMQNYEFVVDLKILKLGRCDVVLGMDWLNS--QLLFDF 379
>gi|31126691|gb|AAP44614.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 987
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 21/120 (17%)
Query: 37 TKSFPRDIGERSCFFMEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDS 96
TK+ PR GE+ C+F + + + G +T + I + LVDS
Sbjct: 343 TKAPPRGNGEKKCWFCK--------EAWFSGHQCKGTTRRDTFSVIILINGKRAVGLVDS 394
Query: 97 GSTHNFISDTFAKKVKNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
GST F+ +A + + +VN +GYDV+LG W+ PI D
Sbjct: 395 GSTSTFMDQEYAIRNQCPLVNT-------------ESKKGYDVILGADWIYNYSPITLDL 441
>gi|108708832|gb|ABF96627.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 999
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 21/120 (17%)
Query: 37 TKSFPRDIGERSCFFMEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDS 96
TK+ PR GE+ C+F + + + G +T + I + LVDS
Sbjct: 353 TKAPPRGNGEKKCWFCK--------EAWFSGHQCKGTTRRDTFSVIILINGKRAVGLVDS 404
Query: 97 GSTHNFISDTFAKKVKNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
GST F+ +A + + +VN +GYDV+LG W+ PI D
Sbjct: 405 GSTSTFMDQEYAIRNQCPLVNT-------------ESKKGYDVILGADWIYNYSPITLDL 451
>gi|357130317|ref|XP_003566796.1| PREDICTED: retrotransposon-derived protein PEG10-like [Brachypodium
distachyon]
Length = 717
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 59 EDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNL 118
++ D+ + ++ +G +T+R+ +GN I+L+DSGS+H+FI + +V +
Sbjct: 385 DETDMHLSLNAVSGADHPDTIRLRCLVGNKVLIMLIDSGSSHSFIDSHLLTSLNYSVVPI 444
Query: 119 ILQGVYVI------------------------VDFNLRELEGYDVVLGTQWLR 147
L V V DF + +L YD +LG WL+
Sbjct: 445 PLTAVKVANGAVLQCDSKVSGLTWWVQHHTFQYDFRVVQLGEYDAILGMDWLK 497
>gi|307136196|gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
Length = 473
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 24/100 (24%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK-------VKNFIVNL----IL 120
G+ A T +I GR+ + +++VD G+THNFIS + + N+ V + +
Sbjct: 352 GLTAPGTFKIKGRVEDREIVIMVDCGATHNFISLKLVESLNLPMAAITNYGVIMGSEKAV 411
Query: 121 QG-------------VYVIVDFNLRELEGYDVVLGTQWLR 147
QG + ++ DF EL D+VLG QWL+
Sbjct: 412 QGREMCKGITVGLPVITIVEDFLPLELGNLDMVLGMQWLQ 451
>gi|41469119|gb|AAS07070.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 987
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 21/120 (17%)
Query: 37 TKSFPRDIGERSCFFMEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDS 96
TK+ PR GE+ C+F + + + G +T + I + LVDS
Sbjct: 353 TKAPPRGNGEKKCWFCK--------EAWFSGHQCKGTTRRDTFSVIILINGKRAVGLVDS 404
Query: 97 GSTHNFISDTFAKKVKNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
GST F+ +A + + +VN +GYDV+LG W+ PI D
Sbjct: 405 GSTSTFMDQEYAIRNQCPLVNT-------------ESKKGYDVILGADWIYNYSPITLDL 451
>gi|357438009|ref|XP_003589280.1| B3 domain-containing protein REM16 [Medicago truncatula]
gi|355478328|gb|AES59531.1| B3 domain-containing protein REM16 [Medicago truncatula]
Length = 423
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKN-FIVNLILQGVYVIVDFNLRELE 135
+T+++ GR+ + ++LVDSG+THNFIS ++ N + + V+V+ +LE
Sbjct: 290 QTIKLRGRVEGVPVLLLVDSGATHNFISKKLVIELANMYKTRSTGERKQVMVEMGKLKLE 349
Query: 136 ---------GYDVVLGTQWLRTL 149
D+VLGT WL ++
Sbjct: 350 IGALVFDLDKVDIVLGTTWLNSI 372
>gi|449449136|ref|XP_004142321.1| PREDICTED: uncharacterized protein LOC101219643 [Cucumis sativus]
Length = 648
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 24/99 (24%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI---------------- 115
GV + T+++ G + ++L+DSG+T+NFIS +++ I
Sbjct: 378 GVTSKGTMKLKGHVNGREVVILIDSGATNNFISQVLVDELQLSIDPGTRFGVTIGNGNQC 437
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWL 146
V + L+ + ++ DF EL D+VLG QWL
Sbjct: 438 EGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWL 476
>gi|449470602|ref|XP_004153005.1| PREDICTED: uncharacterized protein LOC101220479 [Cucumis sativus]
Length = 583
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 24/99 (24%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI---------------- 115
GV + T+++ G + ++L+DSG+T+NFIS +++ I
Sbjct: 343 GVTSKGTMKLKGHVNGREVVILIDSGATNNFISQVLVDELQLSIDPGTRFGVTIGNGNQC 402
Query: 116 --------VNLILQGVYVIVDFNLRELEGYDVVLGTQWL 146
V + L+ + ++ DF EL D+VLG QWL
Sbjct: 403 EGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWL 441
>gi|38346279|emb|CAE03982.2| OSJNBa0033H08.10 [Oryza sativa Japonica Group]
Length = 637
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 58 VEDGDVIMEVDENAGVR--ASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI 115
EDGD + + AGVR SET++++ I + L+DSGSTHNFI+ A +
Sbjct: 463 AEDGDPGISLYAMAGVRLPGSETMQLHITINGKRLVALLDSGSTHNFINADVATDPSMLL 522
Query: 116 VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPI 152
G+ +I DF +L WL PI
Sbjct: 523 SP--CHGLRIIWDFTKLQLTLTRAGCQITWLSIGAPI 557
>gi|77555928|gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1269
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKN 113
G +S TLR+ G I ++LVDSGSTH+FIS+ A K++
Sbjct: 407 GTESSGTLRLQGLIQQYEIMMLVDSGSTHSFISEEMASKIRG 448
>gi|108706173|gb|ABF93968.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2453
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 31/41 (75%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV 111
AGV +S+++R+ G + + ++LVDSGSTH+FI + A+K+
Sbjct: 2351 AGVESSKSIRVRGWVQGLELLMLVDSGSTHSFIDEQVARKL 2391
>gi|307136175|gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 1185
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 58 VEDGDVI-MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV----- 111
VE G ++ + + G+ A T +I G++ + +V++D G+THNFIS +++
Sbjct: 348 VEIGPIVELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATT 407
Query: 112 -----------------KNFIVNLI--LQGVYVIVDFNLRELEGYDVVLGTQWL 146
K ++ L G+ V+ DF EL D+VLG QWL
Sbjct: 408 ETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWL 461
>gi|15451606|gb|AAK98730.1|AC090485_9 Putative mutator-like transposase [Oryza sativa Japonica Group]
Length = 2421
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 31/41 (75%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV 111
AGV +S+++R+ G + + ++LVDSGSTH+FI + A+K+
Sbjct: 2319 AGVESSKSIRVRGWVQGLELLMLVDSGSTHSFIDEQVARKL 2359
>gi|224123438|ref|XP_002330315.1| predicted protein [Populus trichocarpa]
gi|222871350|gb|EEF08481.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 24/103 (23%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFISD--------------TFAKKVKNFIVNL----- 118
T+RI G I+ + SGSTH+FI + A V N V L
Sbjct: 406 TIRIKGNCQGRDLIIFIVSGSTHSFIDEGTITELNVAKSKTMLLAVTVANGTVMLCEMQS 465
Query: 119 -----ILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+QG + + +L+ +D++LG WL+ P+L+DF
Sbjct: 466 PGFTWFMQGYEFKANLRVLKLDRHDIMLGVDWLKQYSPVLFDF 508
>gi|255576772|ref|XP_002529273.1| conserved hypothetical protein [Ricinus communis]
gi|223531262|gb|EEF33105.1| conserved hypothetical protein [Ricinus communis]
Length = 278
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 21 RAELQERRAK-VCATIATKSFPR-DIGERSCFFMEACVK----------VED---GDVIM 65
+A ERR C K +PR ++ +M + +ED G+V +
Sbjct: 115 KAPQVERRCNNTCYRCGNKYYPRHQCKNKALLYMGGEEEECAEDEYTSFIEDKGVGEVEL 174
Query: 66 EVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIV 116
+ +G +S TL+I IG + ++LVDS STH+F+ AK V + IV
Sbjct: 175 SMHATSGSASSNTLKIKSSIGGKTIMILVDSRSTHSFLDVKVAKDVGSHIV 225
>gi|18568267|gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
Length = 2749
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 75/189 (39%), Gaps = 49/189 (25%)
Query: 15 PVRGLSRAELQERRAKVCATIATKSFPRDIGERSCFFMEACVKVED------GDVIMEVD 68
P R L+ AE QERR + + + R F++E ++D D+ + ++
Sbjct: 670 PFRRLTPAEQQERRRQGLCFNCDEPYVRGHVCPRLFYLENDDYIDDEPQEEGADLQIALE 729
Query: 69 EN-----------------AGVRASETLRINGRIGNISPIVLVDSGSTHNFIS------- 104
+ AGVR + + I + LVDSGST NF+S
Sbjct: 730 QEPPSRAAAIIPTVSLHALAGVRTPNAMLLPVSINGHRLVALVDSGSTTNFMSVGLMSRL 789
Query: 105 -------DTFAKKVKNFIVNLILQGVYVIVDFNL-----------RELEGYDVVLGTQWL 146
T +V N N+ QG+ VD + L +DV+LG ++L
Sbjct: 790 QLPSTPHPTIKVQVANGD-NIPCQGMARSVDLRVGTEQFSIDCIGLTLGTFDVILGFEFL 848
Query: 147 RTLEPILWD 155
R L PILWD
Sbjct: 849 RLLGPILWD 857
>gi|18378609|gb|AAL68642.1|AF458766_1 polyprotein [Oryza sativa Japonica Group]
Length = 677
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 26/114 (22%)
Query: 62 DVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISD----------TFAK 109
D +M + +A G ++ + R+ G I ++L+DSGS+H+F+ + + +
Sbjct: 14 DSLMALLASACNGTDSTHSFRVKGLIQGTKLLMLIDSGSSHSFLDENIVQTMQGVTSLPQ 73
Query: 110 KVKNFIVN---LI-----------LQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
VK + + LI LQG +F L L GYD +LG WL+ L
Sbjct: 74 PVKVKVASGEVLICDKQLPDYAWWLQGRCYRTNFKLLSLPGYDAILGIDWLQGL 127
>gi|77551042|gb|ABA93839.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 852
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 24/111 (21%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNF----------------- 114
G+ +S T R++G+I ++LVDSGS+ +F+S FA +++
Sbjct: 324 GIVSSSTKRLHGKIQGRDVLILVDSGSSTSFLSVAFADQLEGVQPLRRPLSVKVANGEML 383
Query: 115 -----IVNLI--LQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+ N + QG F + + GYD +LG WL P+ D+ +
Sbjct: 384 RCLTELPNTVWSAQGFGFCTTFKVITMGGYDAILGMDWLTQHSPMDIDWQA 434
>gi|208609065|dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 31/128 (24%)
Query: 60 DGDVIME-------VDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
DG+ ++E ++ + ++ + ++ G+IGN ++L+D G+T NFIS +++
Sbjct: 399 DGEFVLEGKVLQLSLNSKERLTSNRSFKVKGKIGNREVLILIDCGATSNFISQDLVVELE 458
Query: 113 -------NFIV-----------------NLILQGVYVIVDFNLRELEGYDVVLGTQWLRT 148
++V L +QG+ ++ F + L G +VVLG WL +
Sbjct: 459 IPVIATSEYVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLAS 518
Query: 149 LEPILWDF 156
L I +F
Sbjct: 519 LGNIEANF 526
>gi|31432119|gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 26/119 (21%)
Query: 64 IMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA---------KKVK 112
+M + ++A G+ +T + ++ + LVDSGST F+ FA K++
Sbjct: 492 LMSISQSAVYGLTRPDTFSVMIKVNGKKAVGLVDSGSTTTFMDSKFAIKSQCTLENTKMR 551
Query: 113 NFIV--------NLI-------LQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
IV LI +QG FNL LE YD++LG W+ PI D
Sbjct: 552 KVIVAGGGELKSELIVPGMEYEIQGESFTNSFNLLSLERYDIILGADWIFKYSPITLDL 610
>gi|108862284|gb|ABA96071.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|215767385|dbj|BAG99613.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 12 SSIPVRGLSRAELQERRAK-VCATIATK----------------SFPRDI-GERSCFFME 53
+++P + LS E+ +RR + +C K SFP D GE
Sbjct: 81 AALPRKHLSPVEMAQRRTEGLCYNCHEKYVSGQHCEKSFIIEVISFPDDTEGEDDPPPAA 140
Query: 54 ACVKVEDGDVIMEVDENAGVRAS--ETLRINGRIGNISPIVLVDSGSTHNFISDTFAK 109
+ + G +++ + AG+RA T+++ +G + + L+DSGS HNF+S+T A
Sbjct: 141 NTILADAGKLLISLHALAGIRALMFNTIKVCACVGTVDYLALLDSGSMHNFLSETVAH 198
>gi|116308903|emb|CAH66035.1| H0515C11.11 [Oryza sativa Indica Group]
Length = 499
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 118 LILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
L + G VD + E+ D++LGT+WLR+L PILW+F
Sbjct: 414 LTIDGERFHVDCFVLEVYAIDIILGTEWLRSLGPILWNF 452
>gi|62734591|gb|AAX96700.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550164|gb|ABA92961.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1071
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAKK------------VKNFIVNLILQGVYVIVDFNLR 132
+ +IS VL DSG+TH+F S +FA + N V + ++G+ L
Sbjct: 473 VNSISATVLFDSGATHSFFSKSFAGNHGMEVVSLGRPIIANTPVFIEIEGISFPSSLILL 532
Query: 133 ELEGYDVVLGTQWL 146
E E +DV+LG WL
Sbjct: 533 ESEEFDVILGMDWL 546
>gi|108862706|gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2202
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 24/104 (23%)
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI--------------------- 115
+T+R+ G I ++LVDSGS+ +FIS + ++ N I
Sbjct: 751 QTMRLQGIIQGYDILILVDSGSSCSFISLSVMPQLSNLIQLPVSFQVKVANGQMLSCETE 810
Query: 116 ---VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
V+ +QG + + L+ YD++LG WL P+ D+
Sbjct: 811 LANVSWSVQGHHFCSALKVLPLQSYDMILGMDWLERYSPMDIDW 854
>gi|116309548|emb|CAH66611.1| H0211A12.14 [Oryza sativa Indica Group]
Length = 486
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 59 EDGDVIMEVDENAGVR--ASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIV 116
EDGD + + AGVR SET++++ I + L+DSGSTHNFI+ A +
Sbjct: 313 EDGDPGISLYAMAGVRLPGSETMQLHITINGKRLVALLDSGSTHNFINADVATDPSMLLS 372
Query: 117 NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPI 152
G+ +I DF +L WL PI
Sbjct: 373 P--CHGLRIIWDFTKLQLTLTRAGCQITWLSIGAPI 406
>gi|147802690|emb|CAN72998.1| hypothetical protein VITISV_043958 [Vitis vinifera]
Length = 1078
Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 38/179 (21%)
Query: 15 PVRGLSRAELQERRAK-VCATIATKSFPRDIGE-RSCFFMEACVKVEDGDVI-------- 64
P++ L+ AE+Q R A+ +C K PR + +E E+ D
Sbjct: 188 PMKQLTWAEMQRRHAQGLCFNCDEKFAPRHKCKGXQLLLLEGXYDEEENDEAGAHTHLXG 247
Query: 65 -MEVDENAGVRAS--ETLRINGRIGNISPIVLVDSGSTHNFI--------------SDTF 107
E+ +A R S T+ ++ ++G IVL+DSGSTHNFI ++ F
Sbjct: 248 EXEISLHALTRWSTARTMXVSAKVGPHELIVLIDSGSTHNFINERIVELLQLPMVPTEPF 307
Query: 108 AKKVKNFI----------VNLILQGV-YVIVDFNLRELEGYDVVLGTQWLRTLEPILWD 155
KV N V+++LQG+ + + L G D+VLG L L ++ D
Sbjct: 308 NVKVANGDPLKCQGRFENVSVLLQGIPFTLSTLYSLPLIGLDMVLGVHXLEQLGTVVCD 366
>gi|449511951|ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
Length = 707
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 24/118 (20%)
Query: 56 VKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK--- 112
++ E V + ++ G+ T+++ G++ IVL+D +THNFI + ++++
Sbjct: 388 IQEEHAVVELSINSVVGLSNPRTMKVKGKLLGRQIIVLIDCEATHNFIREGLVEELQIST 447
Query: 113 ----NF-----------------IVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
N+ + +++ VI DF EL G D +LG QWL +L
Sbjct: 448 KSTTNYGVILGSGTAIKGKGVCEAIEMMIGEWRVIDDFLPLELGGVDAILGMQWLYSL 505
>gi|32492359|emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 26/130 (20%)
Query: 53 EACVKVEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK 110
EA E+ + +M V NA G +T + +I + LVDSGST F+ +A +
Sbjct: 459 EAPPDDENQEELMFVSHNAVYGTTRPDTFSVIIQINGRRAVGLVDSGSTSTFMDQDYAVR 518
Query: 111 ---------VKNFIVN---------------LILQGVYVIVDFNLRELEGYDVVLGTQWL 146
K +V +QG FN+ L+GYDV+LG W+
Sbjct: 519 NHCPLVSTDAKKVVVAGGGELKSEVQVPELVYQIQGETFSNKFNIIPLKGYDVILGADWI 578
Query: 147 RTLEPILWDF 156
PI D
Sbjct: 579 YKYSPITLDL 588
>gi|356551468|ref|XP_003544097.1| PREDICTED: uncharacterized protein LOC100808479 [Glycine max]
Length = 600
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 116 VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFA 157
V++ +QG IVDF++ L G D+VLG QWL++L IL +++
Sbjct: 17 VSIHVQGHVFIVDFHVMSLTGADLVLGVQWLKSLGLILKNYS 58
>gi|108862189|gb|ABA96448.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|215767578|dbj|BAG99806.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 649
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 24/92 (26%)
Query: 91 IVLVDSGSTHNFISDTFA------KKVKNFIVNLI------------------LQGVYVI 126
++LVDSGSTH+FI +K+K ++ I +QG
Sbjct: 4 LMLVDSGSTHSFIDKEVGLKLSGIQKLKQPLIVRIADGGTMSCTHEITNCKWWMQGYQFC 63
Query: 127 VDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+F + L YD++LG WL ++ P+ D+A+
Sbjct: 64 NNFRMLPLGNYDIILGMDWLESISPMQVDWAN 95
>gi|218200076|gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indica Group]
Length = 471
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 59 EDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------- 109
+D + + ++ +G T+R+ + N ++LVDSGS+H+F+ FA+
Sbjct: 23 QDENCHISLNALSGANHVNTIRLRALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPI 82
Query: 110 -----KVKN-------FIV---NLILQGVYVIVDFNLRELEGYDVVLGTQWL 146
KV N F+V QG D + L G+D +LG WL
Sbjct: 83 APFLVKVANGDCIPCQFVVPQFTWWFQGRTFTYDMRVVPLGGHDAILGMDWL 134
>gi|147867132|emb|CAN82647.1| hypothetical protein VITISV_005196 [Vitis vinifera]
Length = 456
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 57 KVEDGDVIMEVDENAGVR--ASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNF 114
+V++ ++ E+ +A R T+ I R+G +VLVDSGSTHNFISD +
Sbjct: 174 EVQEPELESEIKLHALTRWTGPRTMCIIARMGPHEVVVLVDSGSTHNFISDRLENMPRLP 233
Query: 115 IVNLILQGVYVIVDFNLRELEGYDVVL 141
I+++ V V LR YD V+
Sbjct: 234 IIHMEAFSVLVANGEKLRCQRLYDKVV 260
>gi|356503071|ref|XP_003520335.1| PREDICTED: uncharacterized protein LOC100785238 [Glycine max]
Length = 498
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK 109
+G AS TLRI G + ++LVD GSTHNF+ D +
Sbjct: 182 SGHPASATLRITGTVNGHEVVILVDGGSTHNFVQDRMVR 220
>gi|449443978|ref|XP_004139752.1| PREDICTED: uncharacterized protein LOC101213746 [Cucumis sativus]
Length = 431
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 16/87 (18%)
Query: 57 KVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIV 116
KVE+ ++ + ++ G+ T+++ G+I ++++DSG+TH+FI+ KNF+
Sbjct: 26 KVENMNIELSINSIVGLSNPGTMKLKGKIKERKVVIIIDSGATHSFIA-------KNFVT 78
Query: 117 NLILQGVYVIVDFNLRELEGYDVVLGT 143
L L + E Y V+LG+
Sbjct: 79 TLSLP---------MTETSNYGVILGS 96
>gi|356551381|ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
Length = 463
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 29/115 (25%)
Query: 16 VRGLSRAELQERRAK-VCATIATKSFP---------------------RDIGERSCFFME 53
VR + E+ ERRAK +C K P D GE ME
Sbjct: 299 VRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGE--IMAME 356
Query: 54 ACVKVEDGDVIMEVDENAGVRAS----ETLRINGRIGNISPIVLVDSGSTHNFIS 104
A + ++ +E ++ GV S T++I G+I N+ +VL+DSG++HNFIS
Sbjct: 357 AVQPDSEEEIEVEC-KSMGVLGSMGEHRTMKIEGKIENVDVLVLIDSGASHNFIS 410
>gi|217073570|gb|ACJ85145.1| unknown [Medicago truncatula]
gi|388517775|gb|AFK46949.1| unknown [Medicago truncatula]
Length = 185
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFIS 104
T++I G++ NI +VLVDSG+THNFIS
Sbjct: 80 TMKIGGKLENIDVVVLVDSGATHNFIS 106
>gi|215707240|dbj|BAG93700.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 535
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 26/121 (21%)
Query: 58 VEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK---KVK 112
+ D V+M + +A G AS +R+ G+I +LVDSGST +FIS A+ ++
Sbjct: 379 LSDSQVLMAISVHAVQGSEASGCMRMLGQIQGKDVFILVDSGSTASFISARVAEGLSELS 438
Query: 113 NFIVNLIL---------------------QGVYVIVDFNLRELEGYDVVLGTQWLRTLEP 151
NL + QG + L YD++LG WL P
Sbjct: 439 QIATNLQVKVADGATLHCQSEIPACEWSTQGQKFCTTLKILPLGNYDMILGMDWLMQHSP 498
Query: 152 I 152
+
Sbjct: 499 M 499
>gi|38346992|emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa Japonica Group]
Length = 1629
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 52/201 (25%)
Query: 5 NQTTCRNSSIPVRGLSRAELQERRAKVCATIATKSFPRDIGERSC-------FFMEACVK 57
++ R SS LS + Q R +C A K P + F
Sbjct: 386 KESEVRRSSGTNERLSSLKAQRRAQGLCYICAEKWSPTHKCSNTVQLHAVQELFTVLHES 445
Query: 58 VEDG---------DVIMEVDENAGVRASET---LRINGRIGNISPIVLVDSGSTHNFISD 105
VEDG +M V A V+ +ET +R+ G+I ++LVDSGS+ +FIS
Sbjct: 446 VEDGLSTTDHVVEQTLMAVSLQA-VQGTETGGCMRMLGQIQGKEILILVDSGSSASFIS- 503
Query: 106 TFAKKVKNFIVNLILQGVYVIV----------------------------DFNLRELEGY 137
K+V + ++ ++ Q V+V V + + EL Y
Sbjct: 504 ---KRVASSLMGVLEQPVHVQVMVAGGAKLHCCSEILNCEWTIQGHVFFTNLKVLELNNY 560
Query: 138 DVVLGTQWLRTLEPILWDFAS 158
D++LG WL P+ D+ +
Sbjct: 561 DMILGMDWLMQHSPMTVDWTT 581
>gi|38568037|emb|CAD40411.3| OSJNBa0065J03.7 [Oryza sativa Japonica Group]
Length = 1414
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 24/98 (24%)
Query: 76 SETLRINGRIGNISPIVLVDSGSTHNFISD----------TFAKKVKNFIVN---LI--- 119
S +R+ G I ++L+DSGS+H+F+ + + + VK + + LI
Sbjct: 330 SGKIRVKGLIQGTKLLMLIDSGSSHSFLDENIVQTMQGVTSLPQPVKVKVASGEVLICDK 389
Query: 120 --------LQGVYVIVDFNLRELEGYDVVLGTQWLRTL 149
LQG +F L L GYD +LG WL+ L
Sbjct: 390 QLPDYAWWLQGRCYRTNFKLLSLPGYDAILGIDWLQGL 427
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFIS 104
T++I G++ NI +VLVDSG+THNFIS
Sbjct: 1011 TMKIGGKLENIDVVVLVDSGATHNFIS 1037
>gi|218186024|gb|EEC68451.1| hypothetical protein OsI_36669 [Oryza sativa Indica Group]
Length = 554
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 67 VDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQGVY 124
+ ENA G T+R+ G IGN ++L+DSGS+ +F++ ++ + + N I +
Sbjct: 405 LSENALFGTEGKRTIRLQGLIGNQQVLILIDSGSSSSFMASHLVDRL-HLVPNSIPSALV 463
Query: 125 VIVD-------------------------FNLRELEGYDVVLGTQWLRTLEPI 152
+IVD F + L GYD++LG WL P+
Sbjct: 464 MIVDGGKLFCDEMAEQVEWWCQGNTFSSNFKILGLGGYDLILGMDWLEAHSPM 516
>gi|284434698|gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 26/120 (21%)
Query: 65 MEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIV--NL-- 118
M+V A G T + +IG I L+DSGSTH F+ FA K I+ NL
Sbjct: 222 MQVSSQAVQGYSRFTTYTVEVKIGGRRGIALLDSGSTHTFMDLRFATKTTCRIMCNNLMK 281
Query: 119 --------ILQGVYV------------IVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
IL G +V F + +L+ YD+VLG W+ PI D +
Sbjct: 282 VTVAGGGSILTGSHVPEVKYSINGQVFCNSFKILKLKNYDMVLGCDWMYQHSPINIDLKT 341
>gi|38344156|emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 24/90 (26%)
Query: 91 IVLVDSGSTHNFISDTFAKK------------------------VKNFIVNLILQGVYVI 126
+ LVDSGST+ F++ FA + K ++ +QG
Sbjct: 502 VALVDSGSTNTFMNYEFALRSGCEIIEFDHNRVMVAGGGILNSTAKTEVIQYKVQGYLFG 561
Query: 127 VDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
F L L+GYD+VLG W+ PI D
Sbjct: 562 KAFQLIPLKGYDIVLGADWIYEHSPINLDL 591
>gi|222636869|gb|EEE67001.1| hypothetical protein OsJ_23913 [Oryza sativa Japonica Group]
Length = 877
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 112 KNFIVNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+N +N+ G VD +L D++LG QWL+TL PILWDF
Sbjct: 682 RNLALNI--DGEAFSVDCFALDLCAVDIILGMQWLQTLGPILWDF 724
>gi|124360394|gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 24/94 (25%)
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI--------------------- 115
+ +R G++ I ++LVDSG+ NF+S A + I
Sbjct: 137 QCIRFQGKVREIPVLMLVDSGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGE 196
Query: 116 ---VNLILQGVYVIVDFNLRELEGYDVVLGTQWL 146
V + +QGV +D L EL GYD+VLG WL
Sbjct: 197 CHGVIISVQGVEWEIDVMLFELRGYDLVLGMAWL 230
>gi|62733109|gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 60 DGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA--------- 108
D + +M V +NA G +T + +I + LVDSGS F+ +A
Sbjct: 418 DQEELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYAIRNDCPLVS 477
Query: 109 ---KKV---------KNFIVNLIL---QGVYVIVDFNLRELEGYDVVLGTQWLRTLEPIL 153
KKV V IL QG FNL L+GYD++LG W+ PI
Sbjct: 478 TDSKKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIYKYSPIT 537
Query: 154 WDF 156
D
Sbjct: 538 LDL 540
>gi|297604112|ref|NP_001055003.2| Os05g0241900 [Oryza sativa Japonica Group]
gi|255676164|dbj|BAF16917.2| Os05g0241900 [Oryza sativa Japonica Group]
Length = 578
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 32/104 (30%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI----------------------- 115
++INGR + + LVDSGST F+ +A ++N+
Sbjct: 374 IKINGR----TAVGLVDSGSTTTFMDQDYA--LRNYYPLKNTDTKKVVVAGGGELKTDVM 427
Query: 116 ---VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
++ +QG F L L+GYD++LG W+ PI D
Sbjct: 428 VPDISYEIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDL 471
>gi|24414261|gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Group]
gi|108706657|gb|ABF94452.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1021
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 72 GVRASET---LRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNF-------------- 114
+ SET +R+ G I ++LVDSGST +F+S A+K+
Sbjct: 496 AIHGSETVGCMRMLGYIQGKEVLILVDSGSTTSFLSSQIAQKLTGVTPLVAATRVKVANG 555
Query: 115 -IVNLIL---------QGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
I+N + QG F + +L YD++LG WL P+ D+
Sbjct: 556 TILNCVASVPNCDWMTQGWVFCTTFKVLDLGSYDMILGMDWLMDHSPMQVDW 607
>gi|124360392|gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 24/94 (25%)
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI--------------------- 115
+ +R G++ I ++LVDSG+ NF+S A + I
Sbjct: 137 QCIRFQGKVREIPVLMLVDSGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGE 196
Query: 116 ---VNLILQGVYVIVDFNLRELEGYDVVLGTQWL 146
V + +QGV +D L EL GYD+VLG WL
Sbjct: 197 CHGVIISVQGVEWEIDVMLFELRGYDLVLGMAWL 230
>gi|108864085|gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 60 DGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA--------- 108
D + +M V +NA G +T + +I + LVDSGS F+ +A
Sbjct: 316 DQEELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYAIRNDCPLVS 375
Query: 109 ---KKV---------KNFIVNLIL---QGVYVIVDFNLRELEGYDVVLGTQWLRTLEPIL 153
KKV V IL QG FNL L+GYD++LG W+ PI
Sbjct: 376 TDSKKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIYKYSPIT 435
Query: 154 WDF 156
D
Sbjct: 436 LDL 438
>gi|108862641|gb|ABG22014.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1422
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 28/90 (31%)
Query: 81 INGRIGNISPIVLVDSGSTHNFISDTFAKK---------VKNFIV--------------- 116
INGR + L+DSGST F+ FA K VK +V
Sbjct: 424 INGR----KAVGLIDSGSTSTFMDQEFAIKSQCPLKNSEVKKVVVARGGELRSEVQVPEI 479
Query: 117 NLILQGVYVIVDFNLRELEGYDVVLGTQWL 146
++QG FNL L+GYD++LG W+
Sbjct: 480 QYVIQGEQFSNPFNLIPLKGYDIILGADWI 509
>gi|53981172|gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 32/104 (30%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFI----------------------- 115
++INGR + + LVDSGST F+ +A ++N+
Sbjct: 374 IKINGR----TAVGLVDSGSTTTFMDQDYA--LRNYYPLKNTDTKKVVVAGGGELKTDVM 427
Query: 116 ---VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
++ +QG F L L+GYD++LG W+ PI D
Sbjct: 428 VPDISYEIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDL 471
>gi|147861322|emb|CAN83996.1| hypothetical protein VITISV_031193 [Vitis vinifera]
Length = 499
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 27/35 (77%)
Query: 75 ASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK 109
++ T+R++ ++G IVL+DSGSTHNFI++ A+
Sbjct: 70 SARTMRVSAKVGPHELIVLIDSGSTHNFINERIAE 104
>gi|19881623|gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
Length = 954
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 24/102 (23%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIV---------------------- 116
+R+ G + ++LVDSGST +FIS A+ ++ +
Sbjct: 412 MRMLGYVQGKEVLILVDSGSTASFISSKIAQTLQGVVTLEPPVQVKVANGSILTCLTSVP 471
Query: 117 --NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+ QG D + L YD++LG WL P+ D+
Sbjct: 472 RCEWMTQGWVFYTDLKVLNLGSYDMILGMDWLMAHSPMQVDW 513
>gi|297608672|ref|NP_001061948.2| Os08g0451600 [Oryza sativa Japonica Group]
gi|215768264|dbj|BAH00493.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255678494|dbj|BAF23862.2| Os08g0451600 [Oryza sativa Japonica Group]
Length = 707
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 59 EDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--------- 109
+D + + ++ +G T+R+ + N ++LVDSGS+H+F+ FA+
Sbjct: 133 QDENCHISLNSLSGASHVNTIRLRALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPI 192
Query: 110 -----KVKN-------FIV---NLILQGVYVIVDFNLRELEGYDVVLGTQWL 146
KV N F+V QG D + L G+D +LG WL
Sbjct: 193 APSLVKVANGDCIHCQFMVPQFTWWFQGRTFTYDMRVVPLGGHDAILGMDWL 244
>gi|21671877|gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1065
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 24/102 (23%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIV---------------------- 116
+R+ G + ++LVDSGST +FIS A+ ++ +
Sbjct: 476 MRMLGYVQGKEVLILVDSGSTASFISSKIAQTLQGVVTLEPPVQVKVANGSILTCLTSVP 535
Query: 117 --NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+ QG D + L YD++LG WL P+ D+
Sbjct: 536 RCEWMTQGWVFYTDLKVLNLGSYDMILGMDWLMAHSPMQVDW 577
>gi|440577377|emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]
Length = 1655
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
G + +T+R+ G + + ++L+DSGSTH+F+ + A K+K
Sbjct: 385 GGESPKTVRLKGIVQGMEVLILIDSGSTHSFVGEALANKLK 425
>gi|147806355|emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera]
Length = 921
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 24/86 (27%)
Query: 95 DSGSTHNFISDTF----------AKKVKNFIVN--------------LILQGVYVIVDFN 130
D GSTHNFI AKK + + N + +QG + D+
Sbjct: 209 DGGSTHNFIDQAIVTXHGLPIIPAKKFQVMVANXEKIXCVGLCPTVTISIQGKSITADYY 268
Query: 131 LRELEGYDVVLGTQWLRTLEPILWDF 156
+ + +VLG QWL TL PI D+
Sbjct: 269 VLPVSXCQLVLGVQWLETLGPIEMDY 294
>gi|255559780|ref|XP_002520909.1| conserved hypothetical protein [Ricinus communis]
gi|223539875|gb|EEF41454.1| conserved hypothetical protein [Ricinus communis]
Length = 150
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 58 VEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
E D + + +RA +++++ G +G +VL+DS STHNF+ + ++++
Sbjct: 48 AERNDSFGQTEGRPCIRAPQSMQVKGSVGGWPLLVLIDSRSTHNFVDEALEEQLR 102
>gi|327267811|ref|XP_003218692.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Anolis carolinensis]
Length = 989
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 29/150 (19%)
Query: 30 KVCATIATKSFPRDIGERSCFFMEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNIS 89
KVC A F + A V G+ M++ + E R R+ +S
Sbjct: 125 KVCRIEARMEFRKKTHGTPVVEYHASASVNSGEEPMQLGMQRKLSQEEKYR-RRRLRPVS 183
Query: 90 PIVLVDSGSTHNFISDTFAKKVKNFIVN----------------------------LILQ 121
+DSG+T +++ +FA+K K IV +Q
Sbjct: 184 TQAFLDSGATVSYVDQSFAEKNKIPIVKKKVTAWVEGADGRLLHSGMVDQETAGVTWQVQ 243
Query: 122 GVYVIVDFNLRELEGYDVVLGTQWLRTLEP 151
G ++ F++ L YDV+LG WL + P
Sbjct: 244 GQKGMLTFDVTALPRYDVILGMDWLAQVNP 273
>gi|222628386|gb|EEE60518.1| hypothetical protein OsJ_13847 [Oryza sativa Japonica Group]
Length = 218
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 16 VRGLSRAELQERRAKVCATIATKSFPRDIGER-SCFFM------------EACVKVEDGD 62
VR L+ +E+ ERR KV +++ R + C F+ D +
Sbjct: 91 VRRLTPSEIDERRRKVLCINCDETYSRGHNKVCKCLFLLDLAYDDDEEDEGDTTPAADPE 150
Query: 63 VI-MEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQ 121
+ + + VR S + ++ R+G+ + LVD GSTHNF+S A +V+ ++
Sbjct: 151 TLRIFLHAVTCVRPSNAMHLSIRLGDATLHALVDMGSTHNFLSQESAARVRLPLIQ--RA 208
Query: 122 GVYVIV 127
G++V V
Sbjct: 209 GLHVTV 214
>gi|18855070|gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
gi|108711868|gb|ABF99663.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1087
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNL------ILQGVY 124
AG + +++ N IVLVDSGS+H+FI+ ++ + + G
Sbjct: 405 AGTSHTNIVQLRALSSNQVLIVLVDSGSSHSFINSALCHRLHLLSEPIPPTSVRVANGEV 464
Query: 125 VIVDFNLRELE------------------GYDVVLGTQWLRTLEPILWDFAS 158
++ D + + + GYD+VLG WL P+ D+A+
Sbjct: 465 LVCDAKISQFDWWVQGHQFSFPVRVLPMGGYDLVLGMDWLTQYSPMTCDWAA 516
>gi|15042811|gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
Length = 799
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNL------ILQGVY 124
AG + +++ N IVLVDSGS+H+FI+ ++ + + G
Sbjct: 117 AGTSHTNIVQLRALSSNQVLIVLVDSGSSHSFINSALCHRLHLLSEPIPPTSVRVANGEV 176
Query: 125 VIVDFNLRELE------------------GYDVVLGTQWLRTLEPILWDFAS 158
++ D + + + GYD+VLG WL P+ D+A+
Sbjct: 177 LVCDAKISQFDWWVQGHQFSFPVRVLPMGGYDLVLGMDWLTQYSPMTCDWAA 228
>gi|32489382|emb|CAE04228.1| OSJNBa0011F23.1 [Oryza sativa Japonica Group]
Length = 1787
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ +I IVL DSG++H+FIS F K K +N V +I ++ V + NLR
Sbjct: 756 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQVCPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|218199463|gb|EEC81890.1| hypothetical protein OsI_25707 [Oryza sativa Indica Group]
Length = 839
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 127 VDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
VD +L D++LG QWL+TL PILWDF
Sbjct: 657 VDCFALDLCAVDIILGMQWLQTLGPILWDF 686
>gi|77551972|gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1747
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + ++ NLR
Sbjct: 673 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICLEVNLRI 732
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 733 EEVDFLAKPIVLDSQSLDIILGMDWL 758
>gi|77552000|gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + + NLR
Sbjct: 755 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRAIQICPEVNLRI 814
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 815 EEVDFLAKPIVLDSQSLDIILGMDWL 840
>gi|147767540|emb|CAN66709.1| hypothetical protein VITISV_006396 [Vitis vinifera]
Length = 1133
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 26/115 (22%)
Query: 52 MEACVKVEDGDVIMEVD--ENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA- 108
M+ +V+ DV E+ AG++A T + G VL+DSGSTHNFIS A
Sbjct: 1019 MKIVSEVQQEDVKPEISLHATAGLKAPNTTTMTGSFLFQPMEVLIDSGSTHNFISVLVAE 1078
Query: 109 ---------KKVKNFI--------------VNLILQGVYVIVDFNLRELEGYDVV 140
+K++ + V L LQ V ++V F + LE +DVV
Sbjct: 1079 CVGFNLKQDRKMEVMVASGEKLVSLGSCSNVQLKLQKVTIVVKFLVLPLEDFDVV 1133
>gi|18542904|gb|AAL75746.1|AC091724_19 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430267|gb|AAP52207.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLILQG---------VYVIVDFNL 131
+ ++ IVL DSG++H+FIS F K K +N V +I+ +Y V+ +
Sbjct: 355 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQIYPEVNLRI 414
Query: 132 REL-----------EGYDVVLGTQWL 146
E+ + D++LG WL
Sbjct: 415 EEVDFLAKPIVLDSQSLDIILGMDWL 440
>gi|255563340|ref|XP_002522673.1| conserved hypothetical protein [Ricinus communis]
gi|223538149|gb|EEF39760.1| conserved hypothetical protein [Ricinus communis]
Length = 162
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 46 ERSCFFMEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNF 102
ER+ F E VK DG+V + + G + TL+I G + ++L+DSGSTH+F
Sbjct: 106 ERAEFNEEKIVK--DGNVEISLHAIKGSGSMNTLKIKGMVNGKDILILIDSGSTHSF 160
>gi|449464816|ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
Length = 2047
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 16/82 (19%)
Query: 63 VIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQG 122
V + ++ G+ A T ++ G + + I++VD G+THNFIS +K+K
Sbjct: 749 VELSLNSVVGLTAPSTFKVKGTVEDREIIIMVDCGATHNFISLMRVEKLK---------- 798
Query: 123 VYVIVDFNLRELEGYDVVLGTQ 144
+ E YDV++G++
Sbjct: 799 ------LPMAETTNYDVIMGSR 814
>gi|77551099|gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 897
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV 111
G+ + TLR+ G + ++LVDSGSTH+FIS+ A ++
Sbjct: 91 GLETTGTLRLQGWLQQHEVLMLVDSGSTHSFISEVMAAQL 130
>gi|55168098|gb|AAV43966.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1684
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLILQGVY-------VIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I+ + + + NLR
Sbjct: 695 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPWRNIRATQICPEVNLRI 754
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 755 EEVDFLAKPIVLDSQSLDIILGMDWL 780
>gi|77551437|gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1214
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ +I IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 140 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRT 199
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 200 EEVDFLAKPIVLDSQNLDIILGMDWL 225
>gi|147769429|emb|CAN61575.1| hypothetical protein VITISV_014037 [Vitis vinifera]
Length = 503
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 25/87 (28%)
Query: 92 VLVDSGSTHNFISDTFA-------KKVKNFI-----------VNLILQGVYVI------- 126
VL D+G+TH+FIS + A ++V+N + V+ I +G +
Sbjct: 341 VLFDTGATHSFISISCANASGLKSERVENLLLIESPMGTNSKVDRICKGCVITLVDIALN 400
Query: 127 VDFNLRELEGYDVVLGTQWLRTLEPIL 153
VD + ++ GYDV+LG WL I+
Sbjct: 401 VDLRILDMTGYDVILGMDWLAVYRAII 427
>gi|108862432|gb|ABA97314.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1219
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 24/102 (23%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIV---------------------- 116
+R+ G + ++LVDSGST +FI+ A+ ++ +
Sbjct: 398 MRMLGYVQGKEVLILVDSGSTTSFITSKIAQTLQGVVTLEPPVQVKVANGSILTCLSSVL 457
Query: 117 --NLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
+ QG D + L YD++LG WL P+ D+
Sbjct: 458 RCEWMTQGWVFYTDLKVLNLGSYDIILGMDWLMAHSPMQVDW 499
>gi|62734515|gb|AAX96624.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550173|gb|ABA92970.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1509
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 517 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLHVPMIVHSPGRNIRATQICPEVNLRI 576
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 577 EEVDFLAKPIVLDSQSLDIILGMDWL 602
>gi|77555766|gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1824
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 773 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPRSNIRATQICPEVNLRI 832
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 833 EEVDFLAKPIVLDSQSLDIILGMDWL 858
>gi|77556838|gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|77550924|gb|ABA93721.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 435
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 59 EDGDVIMEVDENA-GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
EDG+++ E G +S +R+ G I ++LVDSGS+H+FIS+ +++
Sbjct: 333 EDGELLAISKEAVLGTESSRIVRLQGLIERHEVLMLVDSGSSHSFISEQLVHRLQ 387
>gi|31432239|gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1829
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|32489661|emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza sativa Japonica Group]
Length = 1851
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVNFLAKPIVLDSQSLDIILGMDWL 841
>gi|77554308|gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1412
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 63 VIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
V+M + A G + + R+NG + ++LVDSGS+H+FI T A+K++
Sbjct: 389 VLMAISYQAVTGTESLTSFRLNGWVQGYELLMLVDSGSSHSFIDITVAQKLQ 440
>gi|18652523|gb|AAL77156.1|AC091732_7 Putative polyprotein [Oryza sativa Japonica Group]
gi|21672107|gb|AAM74469.1|AC124213_27 Putative retroelement [Oryza sativa Japonica Group]
gi|31431768|gb|AAP53494.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 999
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 121 QGVYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDF 156
QG + DF + L GYD++LG +W PIL D+
Sbjct: 367 QGQTFVTDFKILALGGYDMILGMEWPEAFSPILVDW 402
>gi|110289096|gb|ABG66083.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1093
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ +I IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 78 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 137
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 138 EEVDFLAKPIVLDSQSLDIILGMDWL 163
>gi|110289632|gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 664 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHFPGRNIRATQICPEVNLRI 723
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 724 EEVDFLAKPIVLDSQSLDIILGMDWL 749
>gi|90265261|emb|CAD79706.2| H0302E05.9 [Oryza sativa Indica Group]
Length = 1820
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|116309657|emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|38345510|emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group]
Length = 1851
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|116310101|emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 782 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 841
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 842 EEVDFLAKPIVLDSQSLDIILGMDWL 867
>gi|62701928|gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77548823|gb|ABA91620.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 690 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 749
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 750 EEVDFLAKPIVLDSQSLDIILGMDWL 775
>gi|90265203|emb|CAH67719.1| H0613A10.2 [Oryza sativa Indica Group]
Length = 1809
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWL 841
>gi|108862640|gb|ABA98065.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1686
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 619 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 678
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 679 EEVDFLAKPIVLDSQSMDIILGMDWL 704
>gi|46391139|gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733908|gb|AAV59415.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1649
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 624 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 683
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 684 EEVDFLAKPIVLDSQSLDIILGMDWL 709
>gi|15217334|gb|AAK92672.1|AC090714_5 putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 384 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 443
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 444 EEVDFLAKPIVLDSQSLDIILGMDWL 469
>gi|77553813|gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1556
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 477 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 536
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 537 EEVDFLAKPIVLDSQSLDIILGMDWL 562
>gi|90399274|emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]
Length = 1135
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 140 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 199
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 200 EEVDFLAKPIVLDSQSLDIILGMDWL 225
>gi|77555354|gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1480
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 477 VNSVPAIVLFDSGASHSFISQAFVKINGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 536
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 537 EEVDFLAKPIVLDSQSLDIILGMDWL 562
>gi|108862469|gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 712 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 771
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 772 EEVDFLAKPIVLDSQSLDIILGMDWL 797
>gi|29788873|gb|AAP03419.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 652
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV 111
GVR S+ + I R+G+ L DSGSTH F+S A +V
Sbjct: 171 GVRGSDAMHIMVRLGDADLYALTDSGSTHMFLSQDAATRV 210
>gi|449463685|ref|XP_004149562.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
[Cucumis sativus]
Length = 787
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 56 VKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
++ E V + ++ G+ T+++ G++ IVL+D G+THNFIS++ ++++
Sbjct: 326 IQEEQAVVELSINSVVGLSNPGTMKVKGKLLGKEIIVLIDCGATHNFISESLVEELQ 382
>gi|449475049|ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
sativus]
Length = 674
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 46 ERSCFFMEACVKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISD 105
+R ME ++E G V + ++ G+ +++ G+I IVL+D G+THNFISD
Sbjct: 128 QRELCTMELKSEIE-GVVELCINSVVGLTNPGAMKVRGKIQGREVIVLIDCGATHNFISD 186
Query: 106 TFAKKVKNFIVNLILQGVYVIVDFNLRELEGYDVVLGT 143
+++ N ++ Y V+ G+
Sbjct: 187 KLV----------------LMLKLNTKDTSNYGVIFGS 208
>gi|39546224|emb|CAE04473.3| OSJNBa0029L02.14 [Oryza sativa Japonica Group]
Length = 602
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKK 110
G S TLR+ G I + ++LV+SGS+H+FIS+ A K
Sbjct: 186 GTETSGTLRLQGLIQHNEILMLVNSGSSHSFISEGLADK 224
>gi|62954893|gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77548962|gb|ABA91759.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1416
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 408 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 467
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 468 EEVDFLAKPIVLDSQSLDIILGMDWL 493
>gi|147765520|emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]
Length = 818
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 116 VNLILQGVYVIVDFNLRELEGYDVVLGTQWLRTLEPI 152
V L+LQGV ++ D +L G D +LG QWL TL I
Sbjct: 277 VQLLLQGVKIVEDVMPLDLGGSDFILGMQWLETLGKI 313
>gi|77552465|gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1481
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLI-------LQGVYVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I ++ + + NLR
Sbjct: 408 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 467
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 468 KEVDFLAKPIVLDSQSLDIILGMDWL 493
>gi|147863509|emb|CAN79783.1| hypothetical protein VITISV_002632 [Vitis vinifera]
Length = 166
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 52 MEACVKVEDGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAK 109
ME +V DV E+ +A G++A T+R+ G + VL+DS STHNFIS +
Sbjct: 47 MEIVSEVHQEDVKPEISLHAIAGLKAPNTMRLAGSLFFHPMEVLIDSWSTHNFISVLVVE 106
Query: 110 KV 111
+V
Sbjct: 107 RV 108
>gi|77552523|gb|ABA95320.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 584
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 28/89 (31%)
Query: 79 LRINGRIGNISPIVLVDSGSTHNFISDTFAKK---------VKNFIV--------NLI-- 119
+ ING+ + L+DSGST F++ FA K +K IV NL+
Sbjct: 499 IMINGK----QAVGLIDSGSTGTFMTHEFAVKCKCPIATSTIKKVIVAGGGELKSNLVVP 554
Query: 120 -----LQGVYVIVDFNLRELEGYDVVLGT 143
+QGV + F+L L+GYDV+LG
Sbjct: 555 EVAYKIQGVKFVNAFSLITLKGYDVILGA 583
>gi|449502909|ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus]
Length = 446
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
G+ T++I G I + +VLVD G+THNFISD +K
Sbjct: 358 GLTNPGTMKIRGTIQSKEVVVLVDCGATHNFISDRLVMTLK 398
>gi|77554606|gb|ABA97402.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 692
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 123 VYVIVDFNLRELEGYDVVLGTQWLRTLEPILWDFAS 158
+YV++DF L +L+G+D++ G W+ PI D +
Sbjct: 456 LYVLLDFRLLDLKGFDIIFGCDWIYQHSPITIDLKT 491
>gi|147807472|emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 25/80 (31%)
Query: 92 VLVDSGSTHNFISDTFA-------KKVKNFI-----------VNLILQGVYVI------- 126
VL D+G+TH+FIS + A ++V+N + V+ I +G +
Sbjct: 532 VLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRALN 591
Query: 127 VDFNLRELEGYDVVLGTQWL 146
VD + ++ GYDV+LG WL
Sbjct: 592 VDLRILDMTGYDVILGMDWL 611
>gi|222615969|gb|EEE52101.1| hypothetical protein OsJ_33892 [Oryza sativa Japonica Group]
Length = 271
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 59 EDGDVIMEVDENA-GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
EDG+++ E G +S +R+ G I ++LVDSGS+H+FIS+ +++
Sbjct: 169 EDGELLAISKEAVLGTESSRIVRLQGLIERHEVLMLVDSGSSHSFISEQLVHRLQ 223
>gi|449504808|ref|XP_004162300.1| PREDICTED: uncharacterized protein LOC101229007 [Cucumis sativus]
Length = 746
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 60 DGDVIMEVDENA--GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
D ++E+ N+ G+ T+++ G+I IVL+D G+THNFIS+ ++++
Sbjct: 308 DEQTVVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVEELQ 362
>gi|147840922|emb|CAN73185.1| hypothetical protein VITISV_028246 [Vitis vinifera]
Length = 674
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 13/68 (19%)
Query: 78 TLRINGRIGNISPIVLVDSGSTHNFISDTFAK-------KVKNFIVN------LILQGVY 124
T+R+ IG+ I L+D+G THNF+S+ A+ K+F ++ L+ QG +
Sbjct: 406 TMRVAAAIGSQHMIALIDNGFTHNFLSEKVARFLRLLMVPTKSFAIHVASSERLLCQGHF 465
Query: 125 VIVDFNLR 132
V NL+
Sbjct: 466 EKVQMNLQ 473
>gi|147839856|emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 25/80 (31%)
Query: 92 VLVDSGSTHNFISDTFA-------KKVKNFI-----------VNLILQGVYVI------- 126
VL D+G+TH+FIS + A ++V+N + V+ I +G +
Sbjct: 371 VLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLANRALN 430
Query: 127 VDFNLRELEGYDVVLGTQWL 146
VD + ++ GYDV+LG WL
Sbjct: 431 VDLRILDMTGYDVILGMDWL 450
>gi|18092337|gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
Length = 1470
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAKK-------VKNFI-----------------VNLIL 120
+ +I VL DSG++H+FI+ +F +K +K + VN+ +
Sbjct: 370 VNSIPASVLFDSGASHSFITASFVEKHNIPKYPLKRILHISSPGGDMKATHSCPHVNIKI 429
Query: 121 QGVYVIVDFNLRELEGYDVVLGTQWLRTLEPIL 153
QG+ VD + G DV+LG WL++ + ++
Sbjct: 430 QGIDFTVDPVVLGSNGIDVILGCNWLKSCDGVI 462
>gi|147795669|emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 25/80 (31%)
Query: 92 VLVDSGSTHNFISDTFA-------KKVKNFI-----------VNLILQGVYVI------- 126
VL D+G+TH+FIS + A ++V+N + V+ I +G +
Sbjct: 447 VLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRALN 506
Query: 127 VDFNLRELEGYDVVLGTQWL 146
VD + ++ GYDV+LG WL
Sbjct: 507 VDLRILDMTGYDVILGMDWL 526
>gi|32480101|emb|CAE01992.1| OSJNBb0033G08.8 [Oryza sativa Japonica Group]
Length = 368
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 57 KVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
+ ++ D + + AG +S T+++ +GN ++ VDSGS+H+F++ K++
Sbjct: 206 RAQEEDFNLSLHALAGTCSSATVQLRALVGNQVILIFVDSGSSHSFVNSDLCAKLQ 261
>gi|297735014|emb|CBI17376.3| unnamed protein product [Vitis vinifera]
Length = 1567
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 25/80 (31%)
Query: 92 VLVDSGSTHNFISDTFA-------KKVKNFI-----------VNLILQGVYVI------- 126
VL D+G+TH+FIS + A ++V+N + V+ I +G +
Sbjct: 431 VLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRALN 490
Query: 127 VDFNLRELEGYDVVLGTQWL 146
VD + ++ GYDV+LG WL
Sbjct: 491 VDLRILDMTGYDVILGMDWL 510
>gi|90265087|emb|CAH67759.1| H0124E07.6 [Oryza sativa Indica Group]
Length = 368
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 57 KVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
+ ++ D + + AG +S T+++ +GN ++ VDSGS+H+F++ K++
Sbjct: 206 RAQEEDFNLSLHALAGTCSSATVQLRALVGNQVILIFVDSGSSHSFVNSDLCAKLQ 261
>gi|77553274|gb|ABA96070.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 373
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 71 AGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVK 112
AGVR ++T++++ +G + + L+DSG THNF+S A K
Sbjct: 286 AGVRFNDTMQVHINMGGTNLLALLDSGFTHNFVSTAAASLTK 327
>gi|62734577|gb|AAX96686.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549732|gb|ABA92529.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 948
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 87 NISP-IVLVDSGSTHNFISDTFAKKVKNFIVNLILQGVYVIVDFNLRELEGY--DVVLGT 143
N +P ++L DSG+TH+FIS FA +V L + NL LE DV+LG
Sbjct: 393 NSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVCTPGANLILLESKDVDVILGM 452
Query: 144 QWL 146
WL
Sbjct: 453 DWL 455
>gi|224102399|ref|XP_002312663.1| predicted protein [Populus trichocarpa]
gi|222852483|gb|EEE90030.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 25/80 (31%)
Query: 92 VLVDSGSTHNFISDTFAKKVKNFIVNL------------ILQGVYVIVDFNLR------- 132
VL D+G+TH+F+S FA + + L ++ G YV VD ++
Sbjct: 450 VLFDTGATHSFVSSYFALRFTKQPILLESPLCVAIPSDEVMFGEYVYVDCEVQVQGRNLL 509
Query: 133 ------ELEGYDVVLGTQWL 146
E+ G+DV+LG WL
Sbjct: 510 GDLVILEIVGFDVILGMDWL 529
>gi|348670404|gb|EGZ10226.1| hypothetical protein PHYSODRAFT_338895 [Phytophthora sojae]
Length = 1093
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 74 RASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKVKNFIVNLILQGVYVIVDFNL-- 131
R+ + +I G+I N I+L+D+G+ + + FA+ V L+ VY FN+
Sbjct: 728 RSGDVAKITGKINNAKSILLLDTGAEVSIVDTAFAQGRTRIKVTLVGSLVYF---FNIWV 784
Query: 132 RELEGYDVVLGTQWL 146
+L G++ +LG ++
Sbjct: 785 GDLSGHEAILGMDFM 799
>gi|78708062|gb|ABB47037.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1347
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV 111
GVRAS+ + I +G+ L+DSG H F+S A +V
Sbjct: 255 GVRASDAMHITAHLGDTDLYTLIDSGLMHTFLSQDTAARV 294
>gi|18958673|gb|AAL82656.1|AC092387_4 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|20270059|gb|AAM18147.1|AC092172_7 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1338
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 72 GVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFAKKV 111
GVRAS+ + I +G+ L+DSG H F+S A +V
Sbjct: 255 GVRASDAMHITAHLGDTDLYTLIDSGLMHTFLSQDTAARV 294
>gi|28209489|gb|AAO37507.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1155
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 24/80 (30%)
Query: 91 IVLVDSGSTHNFISDTFA-------KKVKNFIVNLI-----------------LQGVYVI 126
++LVDSGS+H+FI FA K + + +V + +QG
Sbjct: 405 LLLVDSGSSHSFIDYNFAHMLGLPLKPIPSTLVKVANGDCLPCQYVVPSFSWWIQGHTFT 464
Query: 127 VDFNLRELEGYDVVLGTQWL 146
D + LEG+D +LG WL
Sbjct: 465 YDMRVVTLEGHDAILGMDWL 484
>gi|116311106|emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indica Group]
Length = 1680
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLILQGV-------YVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I+ + + + NL+
Sbjct: 752 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSLGRNIRATQICPEVNLKI 811
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 812 EEVDFLAKPIVLDSQSLDIILGMDWL 837
>gi|147828587|emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera]
Length = 701
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 25/80 (31%)
Query: 92 VLVDSGSTHNFISDTFA-------KKVKNFI-----------VNLILQGVYVI------- 126
VL D+G+TH+FIS + A ++V+N + V+ I +G +
Sbjct: 11 VLFDTGATHSFISASCANALGLKTERVENLLLIESPMGMNXRVDRICKGCVITLADRALN 70
Query: 127 VDFNLRELEGYDVVLGTQWL 146
VD + ++ GYDV+LG WL
Sbjct: 71 VDLRILDMXGYDVILGMDWL 90
>gi|38345968|emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group]
Length = 1680
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFAK----KVKNFIVNLILQGV-------YVIVDFNLR- 132
+ ++ IVL DSG++H+FIS F K K +N V +I+ + + + NL+
Sbjct: 752 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSLGRNIRATQICPEVNLKI 811
Query: 133 ------------ELEGYDVVLGTQWL 146
+ + D++LG WL
Sbjct: 812 EEVDFLAKPIVLDSQSLDIILGMDWL 837
>gi|147858335|emb|CAN83518.1| hypothetical protein VITISV_035077 [Vitis vinifera]
Length = 1194
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 25/79 (31%)
Query: 93 LVDSGSTHNFISDTFAKKV------------------KNFIVNLILQGVYVI-------V 127
L+D GSTH+F+S +FA + + +VN IL+ V+ V
Sbjct: 216 LIDPGSTHSFVSVSFAGLLGMSIDNMDFDLFVAIPLGDSVVVNKILRDCIVMIGYREMTV 275
Query: 128 DFNLRELEGYDVVLGTQWL 146
D L +L+ +DV+LG WL
Sbjct: 276 DLVLLDLQDFDVILGMNWL 294
>gi|116309029|emb|CAH66143.1| OSIGBa0114M03.1 [Oryza sativa Indica Group]
Length = 1571
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 24/86 (27%)
Query: 85 IGNISPIVLVDSGSTHNFISDTFA----KKVKNF--------------------IVNLIL 120
+ ++ VL DSG+TH+F+S +FA KV++ V + +
Sbjct: 563 VNSVPATVLFDSGATHSFLSMSFAGNHGMKVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 622
Query: 121 QGVYVIVDFNLRELEGYDVVLGTQWL 146
QGV + + L E + DV+LG WL
Sbjct: 623 QGVPFLANLILLESKDLDVILGMDWL 648
>gi|21397270|gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyprotein [Oryza sativa
Japonica Group]
gi|108706267|gb|ABF94062.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 624
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 59 EDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNFISDTFA-------KKV 111
++ D + ++ G +R+ + + ++LVDSGS+HNFI FA K +
Sbjct: 179 DEEDCHISLNALTGAYLLTAIRLRALVHSKVLLLLVDSGSSHNFIDYNFAQMLGLPLKPI 238
Query: 112 KNFIVNLI-----------------LQGVYVIVDFNLRELEGYDVVLGTQWL 146
+ +V + +QG D + L G+D +LG WL
Sbjct: 239 PSTLVKVANGDCLPCQYVVPGFFWWIQGHTFTYDMRVVTLGGHDAILGMDWL 290
>gi|409039861|gb|EKM49351.1| hypothetical protein PHACADRAFT_201740 [Phanerochaete carnosa
HHB-10118-sp]
Length = 193
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 25/102 (24%)
Query: 77 ETLRINGRIGNISPIVLVDSGSTHNFISDTFAK--KVKNFIVN--LILQ----------- 121
+T+R+ +I N+ +L+D+GST N IS K ++K F ++ + LQ
Sbjct: 88 KTMRVYLKINNLEAYILIDTGSTINIISPDCTKVAELKPFPLSNPITLQLGCLGSWSKVS 147
Query: 122 -GVYVIVD---------FNLRELEGYDVVLGTQWLRTLEPIL 153
GV++ V F++ L+ YD+++GTQ ++ + +L
Sbjct: 148 YGVWLPVSIDPAMHNFYFDVASLDHYDLIIGTQIMQDIGMVL 189
>gi|255561864|ref|XP_002521941.1| conserved hypothetical protein [Ricinus communis]
gi|223538866|gb|EEF40465.1| conserved hypothetical protein [Ricinus communis]
Length = 51
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 56 VKVEDGDVIMEVDENAGVRASETLRINGRIGNISPIVLVDSGSTHNF 102
++VED D+ + + G ++ +L+I G + + ++LVD GSTH F
Sbjct: 1 MEVEDDDMEISMHAIEGRESANSLKIQGEVNGKTIVILVDGGSTHTF 47
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,369,995,581
Number of Sequences: 23463169
Number of extensions: 88134807
Number of successful extensions: 202406
Number of sequences better than 100.0: 259
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 202042
Number of HSP's gapped (non-prelim): 308
length of query: 158
length of database: 8,064,228,071
effective HSP length: 120
effective length of query: 38
effective length of database: 9,543,615,087
effective search space: 362657373306
effective search space used: 362657373306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)