Your job contains 1 sequence.
>040037
AYLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII
CKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQGNYLRILRFLANHNKDIKKVTLKNA
PRYNILIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVD
RNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDI
FQEKYLKIMTYQV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040037
(253 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118430 - symbol:AT4G09660 species:3702 "Arabi... 370 3.2e-47 2
TAIR|locus:2202165 - symbol:AT1G19260 species:3702 "Arabi... 366 1.9e-46 2
TAIR|locus:4515102803 - symbol:AT2G06541 species:3702 "Ar... 328 3.7e-40 2
TAIR|locus:2829839 - symbol:AT3G29763 "AT3G29763" species... 368 7.4e-34 1
TAIR|locus:2829849 - symbol:AT3G29765 species:3702 "Arabi... 275 2.6e-23 1
TAIR|locus:2033523 - symbol:AT1G41920 "AT1G41920" species... 232 2.5e-21 2
TAIR|locus:5019474775 - symbol:AT3G31402 "AT3G31402" spec... 218 6.3e-21 2
TAIR|locus:2036700 - symbol:AT1G42710 "AT1G42710" species... 154 2.6e-14 2
UNIPROTKB|E2R5I7 - symbol:ZMYM1 "Uncharacterized protein"... 146 1.5e-13 2
UNIPROTKB|Q5SW02 - symbol:ZMYM1 "Zinc finger MYM-type pro... 151 3.1e-12 2
UNIPROTKB|Q5SVZ6 - symbol:ZMYM1 "Zinc finger MYM-type pro... 151 3.7e-12 2
TAIR|locus:2093847 - symbol:AT3G29450 "AT3G29450" species... 167 3.4e-10 1
UNIPROTKB|E1BC73 - symbol:ZMYM1 "Uncharacterized protein"... 151 1.7e-09 2
RGD|1307027 - symbol:Zmym1 "zinc finger, MYM-type 1" spec... 117 1.8e-07 2
TAIR|locus:2124675 - symbol:AT4G10200 species:3702 "Arabi... 104 1.9e-05 2
>TAIR|locus:2118430 [details] [associations]
symbol:AT4G09660 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AL161515 EMBL:AL049482 InterPro:IPR025398 Pfam:PF14291
eggNOG:NOG67438 InterPro:IPR006580 SMART:SM00597
HOGENOM:HOG000238438 IPI:IPI00537787 PIR:T04013 RefSeq:NP_192704.1
UniGene:At.54235 ProteinModelPortal:Q9SZ82
EnsemblPlants:AT4G09660.1 GeneID:826552 KEGG:ath:AT4G09660
TAIR:At4g09660 InParanoid:Q9SZ82 OMA:QANDANL PhylomeDB:Q9SZ82
ProtClustDB:CLSN2682451 Genevestigator:Q9SZ82 Uniprot:Q9SZ82
Length = 664
Score = 370 (135.3 bits), Expect = 3.2e-47, Sum P(2) = 3.2e-47
Identities = 71/139 (51%), Positives = 103/139 (74%)
Query: 94 NQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISD 153
N+GN+L +L++ A N+ +KKV LKNAP+ N + +P IQKDIV S E T +II+++ +
Sbjct: 166 NKGNFLELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMDN 225
Query: 154 ALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSK 213
+F +L+D+S DAS KEQ+ VV ++VD+ V ERF+G HV T ++SLK A+D LF+K
Sbjct: 226 DVFGLLVDESADASNKEQMTVVFRFVDKYGVVKERFIGVIHVKETSSLSLKSAIDSLFAK 285
Query: 214 HGLSISRLRGQGHDRASNM 232
+GLS+ +LRGQG+D ASNM
Sbjct: 286 YGLSLKKLRGQGYDGASNM 304
Score = 154 (59.3 bits), Expect = 3.2e-47, Sum P(2) = 3.2e-47
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 2 YLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIIC 61
YL RGPCQP+ H F + + +RFN WF Y + LEYS+ K A+CL CYLF+
Sbjct: 45 YLIRGPCQPRGHKFKQIVIGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQAG 104
Query: 62 K---CETFTKNRFSNWKKPKILE 81
++F F +W K L+
Sbjct: 105 NQGGSDSFLSTGFCSWNKADRLD 127
Score = 43 (20.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 29/133 (21%), Positives = 59/133 (44%)
Query: 83 MLEVLIELT--TCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKD-IVRAC 139
M+ VL+ + +C + + +R + K I +K R N + S+Q+ R
Sbjct: 332 MISVLLNVVGASCTRKDKIREIHRQKVEEK-ISNGEIKTGTRLNQEL--SLQRPGNTRWG 388
Query: 140 SIETTNTIIKDISDALFAILI---DKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVT 196
S T ++++ ++ +L D+ D + ++Q +L+Y FV +L +
Sbjct: 389 SHYKTLLRLEELFSSIVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVF--YLELMLLV 446
Query: 197 STITISLKEALDQ 209
+T SL +AL +
Sbjct: 447 MGLTDSLSKALQR 459
>TAIR|locus:2202165 [details] [associations]
symbol:AT1G19260 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05699 EMBL:CP002684
GO:GO:0009506 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR006580 SMART:SM00597 IPI:IPI00526041
RefSeq:NP_173360.1 UniGene:At.70426 ProteinModelPortal:F4IE28
EnsemblPlants:AT1G19260.1 GeneID:838509 KEGG:ath:AT1G19260
OMA:ATENIAQ Uniprot:F4IE28
Length = 769
Score = 366 (133.9 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
Identities = 70/139 (50%), Positives = 103/139 (74%)
Query: 94 NQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISD 153
N+GN++ +L++ A N+ +KKV LKNAP+ N + +P IQKDIV S E T +II+++ +
Sbjct: 202 NKGNFVELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSKEVTRSIIEEMDN 261
Query: 154 ALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSK 213
+F +L+D+S DAS KEQ+ VV ++VD+ V ERF+G HV T ++SLK A+D LF+K
Sbjct: 262 DVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQETSSLSLKSAIDSLFAK 321
Query: 214 HGLSISRLRGQGHDRASNM 232
+GLS+ +LRGQG+D ASNM
Sbjct: 322 YGLSLKKLRGQGYDGASNM 340
Score = 155 (59.6 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 2 YLQRGPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTIIC 61
YL RGPCQP+ H F + + +RFN WF Y + LEYS+ K A+CL CYLF+
Sbjct: 45 YLIRGPCQPRGHKFKQIAIGKVLRRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTG 104
Query: 62 K---CETFTKNRFSNWKKPKILE 81
++F F +W K L+
Sbjct: 105 NQGGSDSFLSTGFCSWNKADRLD 127
Score = 42 (19.8 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 161 DKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQ 209
D+ D + ++Q +L+Y FV +L + +T SL +AL +
Sbjct: 469 DEGTDTTKRQQAYGILKYFHTFDFVF--YLELMLLVMGLTDSLSKALQR 515
>TAIR|locus:4515102803 [details] [associations]
symbol:AT2G06541 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR008906 InterPro:IPR012337
Pfam:PF05699 EMBL:CP002685 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR025398 Pfam:PF14291 InterPro:IPR006580 SMART:SM00597
IPI:IPI00938992 RefSeq:NP_001154499.1 UniGene:At.53572
UniGene:At.69256 ProteinModelPortal:F4IJB0
EnsemblPlants:AT2G06541.1 GeneID:6240332 KEGG:ath:AT2G06541
OMA:YDESKES Uniprot:F4IJB0
Length = 592
Score = 328 (120.5 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 62/141 (43%), Positives = 97/141 (68%)
Query: 92 TCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDI 151
+ N+GN+L ++++ A N+ + KV L+NAP+ N ++ P IQ+DIV E +II+++
Sbjct: 133 SANRGNFLELVKYTAGQNEVVSKVVLENAPKNNQMVCPKIQRDIVHCFVEEVIRSIIQEV 192
Query: 152 SDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLF 211
+F +++D+S D KEQ+VVV ++VD++ V ERF+G HV T + LK A+D LF
Sbjct: 193 DHDVFCLMVDESADIFDKEQMVVVFRFVDKHATVKERFIGLIHVKETFSAFLKCAIDSLF 252
Query: 212 SKHGLSISRLRGQGHDRASNM 232
+KHGLSI ++RGQ +D ASNM
Sbjct: 253 AKHGLSIKQIRGQDYDGASNM 273
Score = 128 (50.1 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 25 QRFNLAWFIKYQNCLEYSILKNVAYCLCCYLFQTII---CKCETFTKNRFSNWKKPKIL 80
+RFN WF Y LEYS+ K+ AYCL CYLF+ + +TF F WK P+ L
Sbjct: 2 RRFNPDWFDLYSGWLEYSVKKDKAYCLGCYLFRDYLENKSGSDTFATKGFDTWKNPQSL 60
>TAIR|locus:2829839 [details] [associations]
symbol:AT3G29763 "AT3G29763" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
HOGENOM:HOG000238438 IPI:IPI00525782 RefSeq:NP_189620.1
UniGene:At.65185 ProteinModelPortal:Q3EAW7
EnsemblPlants:AT3G29763.1 GeneID:822665 KEGG:ath:AT3G29763
TAIR:At3g29763 InParanoid:Q3EAW7 OMA:MVEICES PhylomeDB:Q3EAW7
Genevestigator:Q3EAW7 Uniprot:Q3EAW7
Length = 505
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 70/139 (50%), Positives = 104/139 (74%)
Query: 94 NQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDISD 153
N+GN+L +L+++A N+ +KKV LKNAP+ N + +P IQKDIV S E T +II+++ +
Sbjct: 70 NKGNFLELLKYIAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMDN 129
Query: 154 ALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSK 213
+F +L+D+S DAS KEQ+ VV ++VD+ V ERF+G HV T ++SLK A+D LF+K
Sbjct: 130 DVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQETSSLSLKSAIDSLFAK 189
Query: 214 HGLSISRLRGQGHDRASNM 232
+GLS+ +LRG+G+D ASNM
Sbjct: 190 YGLSLKKLRGKGYDGASNM 208
>TAIR|locus:2829849 [details] [associations]
symbol:AT3G29765 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
IPI:IPI00538238 RefSeq:NP_189621.1 UniGene:At.65186
ProteinModelPortal:Q3E6V3 EnsemblPlants:AT3G29765.1 GeneID:822666
KEGG:ath:AT3G29765 TAIR:At3g29765 HOGENOM:HOG000238438
InParanoid:Q3E6V3 OMA:WKEQMAV PhylomeDB:Q3E6V3
Genevestigator:Q3E6V3 Uniprot:Q3E6V3
Length = 536
Score = 275 (101.9 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 54/107 (50%), Positives = 79/107 (73%)
Query: 126 LIAPSIQKDIVRACSIETTNTIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFV 185
+ +P IQKDIV S E T +II+++ + +F +L+D+S DAS KEQ+ VV ++VD+ V
Sbjct: 1 MTSPPIQKDIVHCFSEEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVV 60
Query: 186 IERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
ERF+G HV T ++SLK A+D LF+K+GLS+ +LRG+G+D ASNM
Sbjct: 61 KERFIGVIHVQETSSLSLKSAIDSLFAKYGLSLKKLRGKGYDGASNM 107
>TAIR|locus:2033523 [details] [associations]
symbol:AT1G41920 "AT1G41920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002684 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00537363
RefSeq:NP_174954.1 UniGene:At.51289 ProteinModelPortal:F4I7X4
PRIDE:F4I7X4 EnsemblPlants:AT1G41920.1 GeneID:840805
KEGG:ath:AT1G41920 OMA:DESANRG PhylomeDB:F4I7X4 Uniprot:F4I7X4
Length = 496
Score = 232 (86.7 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 50/145 (34%), Positives = 92/145 (63%)
Query: 92 TCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACS--IETTNTIIK 149
+ N+GN+L ++++ N+ I KV L+NAP+ N ++ + + ++ + ++ ++
Sbjct: 23 SANRGNFLELVKYTVGQNEVISKVVLENAPKNNQMVFDEMSEPLIPETRDPVPSSFLLLD 82
Query: 150 DISDALFAILIDKSCDASM--KEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEAL 207
I D + ++ ++ +++ KEQ+ VV ++VD++ V ERF+G HV T + SLK A+
Sbjct: 83 LILD--YPVVWQQTVQSNVSDKEQMAVVFRFVDKHGTVKERFIGLIHVKETSSASLKCAI 140
Query: 208 DQLFSKHGLSISRLRGQGHDRASNM 232
D LF+K GLS+ +LRGQG+D A+NM
Sbjct: 141 DSLFAKRGLSMKQLRGQGYDGANNM 165
Score = 46 (21.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 234 SCKSRDIFQEKYLK 247
SCK +D +E+YLK
Sbjct: 224 SCKGKDRIREEYLK 237
>TAIR|locus:5019474775 [details] [associations]
symbol:AT3G31402 "AT3G31402" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00938621
RefSeq:NP_001154657.1 UniGene:At.74659 ProteinModelPortal:F4J921
EnsemblPlants:AT3G31402.1 GeneID:7922520 KEGG:ath:AT3G31402
OMA:EAMESKE Uniprot:F4J921
Length = 393
Score = 218 (81.8 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 44/102 (43%), Positives = 68/102 (66%)
Query: 146 TIIKDISDALFAILIDKSCDASMKEQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKE 205
++I++I +F +L+D+S D S KEQ+ +V ++ D++ V ERFL HV T ISLK
Sbjct: 89 SVIEEIDHNVFGLLVDESADVSDKEQMTLVFRFFDKSGIVKERFLSIIHVKETSAISLKS 148
Query: 206 ALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLK 247
A+D LF+K+ L+I + RGQG+D SCK +D+ +EK+ K
Sbjct: 149 AIDDLFAKYRLNIKKGRGQGYDGEIG-ASCKRKDLIREKHRK 189
Score = 51 (23.0 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 7/22 (31%), Positives = 17/22 (77%)
Query: 92 TCNQGNYLRILRFLANHNKDIK 113
+ N+GN++ +L++ A+ N+ +K
Sbjct: 65 SANKGNFVELLKYTADQNEVVK 86
>TAIR|locus:2036700 [details] [associations]
symbol:AT1G42710 "AT1G42710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
InterPro:IPR025398 Pfam:PF14291 EMBL:AC035249 IPI:IPI00544217
RefSeq:NP_174994.1 UniGene:At.52002 ProteinModelPortal:Q9C842
EnsemblPlants:AT1G42710.1 GeneID:840883 KEGG:ath:AT1G42710
TAIR:At1g42710 PhylomeDB:Q9C842 Genevestigator:Q9C842
Uniprot:Q9C842
Length = 206
Score = 154 (59.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 170 EQVVVVLQYVDRNRFVIERFLGSKHVTSTITISLKEALDQLFSKHGLSISRLRGQGHDRA 229
EQ+ VV ++VD++ V ERF+ HV T + S+K A+D LF+K+GLS+ +RGQG+D A
Sbjct: 120 EQMAVVFRFVDKSGTVKERFIEVVHVKETSSASVKSAIDDLFAKYGLSLKTVRGQGYDGA 179
Query: 230 SNMVSCK 236
S M K
Sbjct: 180 SIMKVAK 186
Score = 45 (20.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 25 QRFNLAWFIKYQNCLEYSIL 44
+RF+ AWF KY +++ L
Sbjct: 7 RRFDPAWFEKYDGIIKHERL 26
>UNIPROTKB|E2R5I7 [details] [associations]
symbol:ZMYM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 GeneTree:ENSGT00550000074408 InterPro:IPR011017
SMART:SM00746 OMA:MEPERLN InterPro:IPR006580 SMART:SM00597
EMBL:AAEX03009659 Ensembl:ENSCAFT00000005789 Uniprot:E2R5I7
Length = 1073
Score = 146 (56.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 36/148 (24%), Positives = 78/148 (52%)
Query: 90 LTTCNQGNYLRILRFLA-NHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTII 148
+++ N+GN+L +L A + ++I ++ YN + IQ DI+ E I+
Sbjct: 510 ISSMNKGNFLELLEIRAKDKGEEIFRLMNSQVDFYN---STQIQNDIIEIIKTEMLQDIV 566
Query: 149 KDIS-DALFAILIDKSCDASMKEQVVVVLQYVDR-NRFVI--ERFLGSKHVTSTITISLK 204
+I+ + F+I+ D++ D++ KEQ+ + ++Y + ++ ++ ERFLG V L
Sbjct: 567 DEINVSSAFSIICDETTDSATKEQLAIYVRYPQKMSKAILIKERFLGFIDVKEMSGTKLH 626
Query: 205 EALDQLFSKHGLSISRLRGQGHDRASNM 232
+ + G+ ++++ GQ +D +N+
Sbjct: 627 RTIKTYLQQIGVDLNKICGQAYDSTANL 654
Score = 103 (41.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 6 GPCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLF--QTIICKC 63
G C PKF + + K + + + +W Q+ L+ SI K+V +C C LF + C
Sbjct: 367 GLCHPKFTSKVQ-KVKDKSRSIKKSWCSNLQH-LKNSIKKDVTFCYSCQLFCQKNFSCGG 424
Query: 64 ETFTKNRFSNWKK 76
E+F SNWKK
Sbjct: 425 ESFAGQGISNWKK 437
>UNIPROTKB|Q5SW02 [details] [associations]
symbol:ZMYM1 "Zinc finger MYM-type protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR011017 SMART:SM00746 EMBL:AL607089
UniGene:Hs.471243 HGNC:HGNC:26253 HOGENOM:HOG000132949
HOVERGEN:HBG076163 InterPro:IPR006580 SMART:SM00597 IPI:IPI00470588
SMR:Q5SW02 STRING:Q5SW02 Ensembl:ENST00000373329 Uniprot:Q5SW02
Length = 1067
Score = 151 (58.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 41/151 (27%), Positives = 85/151 (56%)
Query: 90 LTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIK 149
+++ N+GN+L +L A +K + L N+ + + + IQ DI+ E I+
Sbjct: 503 VSSVNKGNFLELLEMRAK-DKGEETFRLMNS-QVDFYNSTQIQSDIIEIIKTEMLQDIVN 560
Query: 150 DISDA-LFAILIDKSCDASMKEQVVVVLQYVDRNRFVI---ERFLG---SKHVTST-ITI 201
+I+D+ F+I+ D++ +++MKEQ+ + ++Y ++ I ERFLG ++ +T T +
Sbjct: 561 EINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHR 620
Query: 202 SLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
++K L Q+ G+ + ++ GQ +D +N+
Sbjct: 621 TIKTYLQQI----GVDMDKIHGQAYDSTTNL 647
Score = 84 (34.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 8 CQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKN----VAYCLCCYLF--QTIIC 61
C PK C SK ++ + + IK C ++ L+N VA+C C LF + C
Sbjct: 363 CHPK----CTSKVQKVKGKSRS---IKKSCCADFECLENSKKDVAFCYSCQLFCQKYFSC 415
Query: 62 KCETFTKNRFSNWKK 76
E+F + SNWKK
Sbjct: 416 GRESFATHGTSNWKK 430
>UNIPROTKB|Q5SVZ6 [details] [associations]
symbol:ZMYM1 "Zinc finger MYM-type protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR008906 InterPro:IPR010507
InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467 GO:GO:0005634
GO:GO:0046872 EMBL:CH471059 GO:GO:0008270 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 InterPro:IPR011017
SMART:SM00746 EMBL:BX537537 EMBL:AL607089 IPI:IPI00643628
RefSeq:NP_079048.3 UniGene:Hs.471243 ProteinModelPortal:Q5SVZ6
SMR:Q5SVZ6 IntAct:Q5SVZ6 STRING:Q5SVZ6 PhosphoSite:Q5SVZ6
DMDM:74743897 PaxDb:Q5SVZ6 PRIDE:Q5SVZ6 Ensembl:ENST00000359858
Ensembl:ENST00000373330 GeneID:79830 KEGG:hsa:79830 UCSC:uc001bym.3
CTD:79830 GeneCards:GC01P035526 H-InvDB:HIX0000408 HGNC:HGNC:26253
neXtProt:NX_Q5SVZ6 PharmGKB:PA134948969 eggNOG:NOG67438
HOGENOM:HOG000132949 HOVERGEN:HBG076163 InParanoid:Q5SVZ6
OMA:MEPERLN OrthoDB:EOG4RV2QK GenomeRNAi:79830 NextBio:69469
ArrayExpress:Q5SVZ6 Bgee:Q5SVZ6 CleanEx:HS_ZMYM1
Genevestigator:Q5SVZ6 GermOnline:ENSG00000197056 InterPro:IPR006580
SMART:SM00597 Uniprot:Q5SVZ6
Length = 1142
Score = 151 (58.2 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 41/151 (27%), Positives = 85/151 (56%)
Query: 90 LTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIK 149
+++ N+GN+L +L A +K + L N+ + + + IQ DI+ E I+
Sbjct: 578 VSSVNKGNFLELLEMRAK-DKGEETFRLMNS-QVDFYNSTQIQSDIIEIIKTEMLQDIVN 635
Query: 150 DISDA-LFAILIDKSCDASMKEQVVVVLQYVDRNRFVI---ERFLG---SKHVTST-ITI 201
+I+D+ F+I+ D++ +++MKEQ+ + ++Y ++ I ERFLG ++ +T T +
Sbjct: 636 EINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHR 695
Query: 202 SLKEALDQLFSKHGLSISRLRGQGHDRASNM 232
++K L Q+ G+ + ++ GQ +D +N+
Sbjct: 696 TIKTYLQQI----GVDMDKIHGQAYDSTTNL 722
Score = 84 (34.6 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 8 CQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKN----VAYCLCCYLF--QTIIC 61
C PK C SK ++ + + IK C ++ L+N VA+C C LF + C
Sbjct: 438 CHPK----CTSKVQKVKGKSRS---IKKSCCADFECLENSKKDVAFCYSCQLFCQKYFSC 490
Query: 62 KCETFTKNRFSNWKK 76
E+F + SNWKK
Sbjct: 491 GRESFATHGTSNWKK 505
>TAIR|locus:2093847 [details] [associations]
symbol:AT3G29450 "AT3G29450" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 UniGene:At.53572
IPI:IPI00527525 RefSeq:NP_189591.1 ProteinModelPortal:F4J326
EnsemblPlants:AT3G29450.1 GeneID:822606 KEGG:ath:AT3G29450
OMA:ICLRILA Uniprot:F4J326
Length = 522
Score = 167 (63.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 30/83 (36%), Positives = 54/83 (65%)
Query: 92 TCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIKDI 151
+ N+ N+L ++++ A N+ + K+ L+NAP+ N + P IQKDIV + E +II+++
Sbjct: 106 SANRENFLELVKYTAGQNEAVSKIVLENAPKNNQMACPKIQKDIVHCFAEEVIRSIIQEV 165
Query: 152 SDALFAILIDKSCDASMKEQVVV 174
+F +++D+S D S KEQ+ V
Sbjct: 166 DHDVFWLMVDESADISDKEQMAV 188
>UNIPROTKB|E1BC73 [details] [associations]
symbol:ZMYM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR008906 InterPro:IPR010507
InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467 GO:GO:0008270
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291
GeneTree:ENSGT00550000074408 InterPro:IPR011017 SMART:SM00746
OMA:MEPERLN EMBL:DAAA02009211 IPI:IPI00688021
Ensembl:ENSBTAT00000061426 ArrayExpress:E1BC73 Uniprot:E1BC73
Length = 1130
Score = 151 (58.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 39/147 (26%), Positives = 77/147 (52%)
Query: 90 LTTCNQGNYLRILRFLA-NHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTII 148
+++ N+GN+L +L A + ++I ++ YN + IQ DI+ E I+
Sbjct: 568 ISSVNKGNFLELLEIRAKDKGEEIFRLMNSQVDFYN---STQIQNDIIEIIKTEILQDIV 624
Query: 149 KDIS-DALFAILIDKSCDASMKEQVVVVLQYVDR-NRFVI--ERFLGSKHVTSTITISLK 204
+I+ + F+++ D++ D + K Q V ++Y + ++ V+ ERFLG V SL
Sbjct: 625 NEINVSSAFSVICDETTDGATKGQFSVCVRYPQKTSKAVLIKERFLGFIDVEEMTGTSLH 684
Query: 205 EALDQLFSKHGLSISRLRGQGHDRASN 231
++ + G+ ++++RGQ +D SN
Sbjct: 685 RSIKAYLQQIGVDLNKIRGQAYDSTSN 711
Score = 58 (25.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 35 YQNCLEYSILKNVAYCLCCYLF--QTIICKCETFTKNRFSNWKK 76
Y LE SI K+V +C C LF + E+ S+WKK
Sbjct: 452 YFQRLENSIKKDVIFCYSCQLFCQKKFNYGRESLRAQGISHWKK 495
>RGD|1307027 [details] [associations]
symbol:Zmym1 "zinc finger, MYM-type 1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
RGD:1307027 GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098
EMBL:CH473968 InterPro:IPR025398 Pfam:PF14291
GeneTree:ENSGT00550000074408 CTD:79830 RefSeq:NP_001101453.1
UniGene:Rn.19963 Ensembl:ENSRNOT00000064015 GeneID:313604
KEGG:rno:313604 NextBio:666535 Uniprot:G3V9X1
Length = 995
Score = 117 (46.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 35/150 (23%), Positives = 77/150 (51%)
Query: 90 LTTCNQGNYLRILRFLANHNKDIKKVTLKNAPRYNILIAPSIQKDIVRACSIETTNTIIK 149
+++ N+GN+L +L A ++ ++ + Y+ + +Q++I+ E I+
Sbjct: 432 ISSINKGNFLELLEIRARDKGEVSRLMSSHIDFYSSTL---VQEEIIEIIKGEMLQDIVS 488
Query: 150 DIS-DALFAILIDKSCDASMKEQVVVVLQYVDRNR---FVIERFLG---SKHVTST-ITI 201
+I+ + F+I+ ++ + + Q+ V ++Y + FV ERFLG ++ VT +
Sbjct: 489 EINASSAFSIICEEVAGSGAERQLSVCVRYAQKLPSAVFVKERFLGFVTAEEVTGAHVHR 548
Query: 202 SLKEALDQLFSKHGLSISRLRGQGHDRASN 231
+K L Q+ G+ +++ GQ +D A+N
Sbjct: 549 RIKAYLQQV----GVDFNKICGQAYDSATN 574
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 7 PCQPKFHNFCKSKFEQQQQRFNLAWFIKYQNCLEYSILKNVAYCLCCYLF--QTIICKCE 64
PC K + + K + + Q W Q+ L S +A+C CYLF + + C+ E
Sbjct: 289 PCFSKSTS-TEQKIKSEPQPAGELWSPGSQH-LRPSTANEIAFCYSCYLFYQKKVSCRRE 346
Query: 65 TF-TKNRFSNWKK 76
F TK ++W++
Sbjct: 347 AFATKGAAADWER 359
>TAIR|locus:2124675 [details] [associations]
symbol:AT4G10200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR008906 InterPro:IPR012337
Pfam:PF05699 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003676
SUPFAM:SSF53098 EMBL:AL049487 EMBL:AL161516 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR006580 SMART:SM00597 HOGENOM:HOG000239492
IPI:IPI00537716 PIR:T04070 RefSeq:NP_192758.1 UniGene:At.54251
ProteinModelPortal:Q9SN25 PRIDE:Q9SN25 EnsemblPlants:AT4G10200.1
GeneID:826611 KEGG:ath:AT4G10200 TAIR:At4g10200 InParanoid:Q9SN25
OMA:TSETHRI ArrayExpress:Q9SN25 Genevestigator:Q9SN25
Uniprot:Q9SN25
Length = 733
Score = 104 (41.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 147 IIKDISDA-LFAILIDKSCDASMKEQVVVVLQYVD---RNRFVIERFLGSKHVTSTITIS 202
IIK I +A F++++D + D S KEQ+ ++++ VD + V E FL V+
Sbjct: 273 IIKKIQEAKYFSVILDCTPDKSHKEQMSLIIRCVDVSMASTQVSEFFLTFVEVSDKSGEG 332
Query: 203 LKEALDQLFSKHGLSISRLRGQGHDRASNMVSCKSRDIFQEKYLKI 248
L E L L+I+ +RGQG+D NM K + + Q+K L I
Sbjct: 333 LFELLCDTLVALNLNINDVRGQGYDNGCNMKG-KHKGV-QKKLLDI 376
Score = 69 (29.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/134 (23%), Positives = 60/134 (44%)
Query: 36 QNCLEYSILKNVAYCLCCYLFQTIICKCETFTKNRFSNWKKPKILESMLEVLIELTTCNQ 95
+N L YS + + YC CC LF + + F++W+ +I S E C
Sbjct: 121 RNWLLYSKVSDKVYCFCCKLFGRDQDAMQ-LSSTGFNDWRNIRIRLSQHETSHRHIVC-M 178
Query: 96 GNYLRILRFLANH---NKDIKK-VTL-KNAPRYNILIAPSIQKDIVRA-CSIETTNTIIK 149
++ + L H +K ++K + + KN R +L S+ K++ + + N I
Sbjct: 179 SKWMELELRLRKHLTIDKCLQKDINIEKNHWREVLLRIFSLVKNLAKQNLAFRGENEKIG 238
Query: 150 DISDALFAILIDKS 163
++ F +L+++S
Sbjct: 239 QKNNGNFRVLLNRS 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.137 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 253 253 0.00083 114 3 11 22 0.37 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 609 (65 KB)
Total size of DFA: 202 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.71u 0.12s 21.83t Elapsed: 00:00:01
Total cpu time: 21.71u 0.12s 21.83t Elapsed: 00:00:01
Start: Thu May 9 23:26:54 2013 End: Thu May 9 23:26:55 2013