Query 040039
Match_columns 274
No_of_seqs 142 out of 1282
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 06:40:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m7h_A Putidacin L1; monocot m 100.0 9.3E-40 3.2E-44 290.6 12.3 196 1-237 36-249 (276)
2 1dlp_A Lectin scafet precursor 100.0 1.8E-33 6.2E-38 244.8 14.9 190 1-228 28-229 (236)
3 4h3o_A Lectin; cadmium, plant 99.7 2.2E-17 7.5E-22 125.7 11.8 69 36-107 36-105 (105)
4 1xd5_A Gastrodianin-1, antifun 99.7 1.9E-17 6.6E-22 127.5 11.4 95 48-171 15-111 (112)
5 3a0c_A Mannose/sialic acid-bin 99.7 1.3E-17 4.4E-22 128.1 9.9 88 51-169 20-108 (110)
6 3a0c_A Mannose/sialic acid-bin 99.7 1.2E-16 4.2E-21 122.6 11.9 71 37-111 38-109 (110)
7 1b2p_A Protein (lectin); manno 99.7 2.1E-16 7.2E-21 123.0 11.8 85 53-168 32-117 (119)
8 2dpf_A Curculin; sweet taste, 99.7 4.1E-16 1.4E-20 120.5 11.9 73 37-113 38-111 (115)
9 2dpf_A Curculin; sweet taste, 99.7 5.3E-16 1.8E-20 119.9 11.7 89 52-171 21-110 (115)
10 1xd5_A Gastrodianin-1, antifun 99.7 7.4E-16 2.5E-20 118.5 11.3 73 37-111 37-110 (112)
11 1b2p_A Protein (lectin); manno 99.6 1.8E-15 6.1E-20 117.7 11.6 84 1-108 32-116 (119)
12 3dzw_A Agglutinin; lectin, man 99.6 1.3E-14 4.3E-19 111.1 9.8 69 37-109 37-106 (109)
13 3mez_B Mannose-specific lectin 99.5 1.5E-13 5.3E-18 105.7 10.9 94 45-168 17-113 (113)
14 3mez_A Mannose-specific lectin 99.5 3.1E-13 1.1E-17 103.7 9.8 92 47-168 15-109 (111)
15 3mez_B Mannose-specific lectin 99.4 3.9E-13 1.3E-17 103.4 9.6 68 36-107 43-111 (113)
16 3r0e_B Lectin; carbohydrate bi 99.4 1.2E-12 4E-17 100.2 8.1 66 38-107 42-108 (110)
17 3dzw_A Agglutinin; lectin, man 99.4 3.7E-12 1.3E-16 97.2 10.0 85 52-167 20-105 (109)
18 3r0e_B Lectin; carbohydrate bi 99.4 3.9E-12 1.3E-16 97.3 9.9 84 52-167 25-109 (110)
19 3r0e_A Lectin; carbohydrate bi 99.3 3.7E-12 1.2E-16 97.3 8.7 70 40-118 39-109 (109)
20 3r0e_A Lectin; carbohydrate bi 99.3 9.5E-12 3.3E-16 95.0 9.7 91 45-169 14-106 (109)
21 4h3o_A Lectin; cadmium, plant 99.2 8.1E-11 2.8E-15 89.2 11.1 76 53-155 21-98 (105)
22 3m7h_A Putidacin L1; monocot m 99.2 6E-11 2E-15 105.0 10.7 70 37-110 183-252 (276)
23 1dlp_A Lectin scafet precursor 99.2 8.8E-11 3E-15 101.4 11.3 88 52-170 27-114 (236)
24 3mez_A Mannose-specific lectin 99.2 4E-11 1.4E-15 91.8 7.6 64 40-107 40-107 (111)
25 1edm_B Factor IX; epidermal gr 92.7 0.038 1.3E-06 33.0 1.2 27 247-274 4-34 (39)
26 1egf_A Epidermal growth factor 90.4 0.11 3.8E-06 33.3 1.6 28 247-274 4-39 (53)
27 1k36_A Epiregulin; EGF-like fo 89.0 0.074 2.5E-06 33.3 -0.1 27 247-274 4-38 (46)
28 2ygo_A WIF-1, WNT inhibitory f 88.6 0.2 6.9E-06 41.0 2.3 25 248-274 150-175 (188)
29 3no2_A Uncharacterized protein 87.4 3 0.0001 35.4 9.2 62 37-98 155-230 (276)
30 3no2_A Uncharacterized protein 86.7 6.7 0.00023 33.2 11.1 63 36-98 24-94 (276)
31 2rnl_A Amphiregulin; AR, color 85.9 0.23 7.8E-06 31.7 0.9 27 247-274 10-44 (50)
32 1a3p_A Epidermal growth factor 85.9 0.19 6.6E-06 30.9 0.5 21 254-274 10-36 (45)
33 3u7u_G Neuregulin 1; signaling 85.0 0.22 7.5E-06 32.4 0.5 27 247-274 9-44 (55)
34 3e50_C Protransforming growth 82.0 0.39 1.3E-05 30.6 0.7 22 252-274 13-40 (50)
35 2k2s_B Micronemal protein 6; m 81.6 0.11 3.7E-06 34.6 -2.1 27 246-273 11-43 (61)
36 1as5_A Conotoxin Y-PIIIE; neur 80.5 1.1 3.9E-05 23.5 2.1 19 248-266 3-21 (26)
37 1emn_A Fibrillin; extracellula 79.8 0.58 2E-05 32.6 1.1 27 247-274 45-75 (82)
38 1nql_B Epidermal growth factor 79.3 0.27 9.1E-06 31.6 -0.8 23 252-274 11-39 (53)
39 1x7a_L Coagulation factor IX, 79.2 0.48 1.6E-05 37.0 0.5 27 247-274 49-79 (146)
40 1nfu_B Coagulation factor XA, 78.5 0.42 1.4E-05 39.4 0.0 28 246-274 42-73 (195)
41 4d90_A EGF-like repeat and dis 78.3 0.67 2.3E-05 35.5 1.1 27 247-274 98-128 (143)
42 1emn_A Fibrillin; extracellula 78.3 0.78 2.7E-05 31.9 1.4 26 247-273 6-35 (82)
43 1iox_A Betacellulin; EGF-like 78.3 0.39 1.3E-05 30.5 -0.2 27 247-274 6-40 (50)
44 1hae_A Heregulin-alpha; growth 78.2 0.44 1.5E-05 31.5 0.1 28 246-274 6-42 (63)
45 2wg3_C Hedgehog-interacting pr 78.2 1.1 3.7E-05 41.8 2.8 61 213-274 338-418 (463)
46 2vh0_B Activated factor XA lig 76.7 0.5 1.7E-05 36.2 0.0 27 247-274 43-73 (134)
47 1xdt_R Hbegf, heparin-binding 75.9 0.76 2.6E-05 32.2 0.7 27 247-274 38-72 (79)
48 2c4f_L Coagulation factor VII 72.0 0.72 2.5E-05 35.7 -0.2 28 246-274 47-78 (142)
49 1apq_A Complement protease C1R 71.5 0.9 3.1E-05 28.5 0.2 19 253-273 20-42 (53)
50 1tpg_A T-plasminogen activator 70.1 1.3 4.6E-05 31.4 0.9 27 247-274 49-81 (91)
51 1z6c_A Vitamin K-dependent pro 70.1 2.6 8.9E-05 29.4 2.5 26 247-273 4-34 (87)
52 2e26_A Reelin, reeler protein; 70.0 0.78 2.7E-05 45.0 -0.5 23 252-274 538-560 (725)
53 1n1i_A Merozoite surface prote 69.5 0.79 2.7E-05 33.7 -0.4 29 245-274 9-42 (105)
54 3ltf_D Protein spitz; receptor 67.6 0.83 2.9E-05 29.8 -0.6 21 254-274 15-43 (58)
55 3ca7_A Protein spitz; argos, E 67.5 0.84 2.9E-05 28.9 -0.6 21 254-274 15-43 (52)
56 1aut_L Activated protein C; se 64.6 2.1 7.3E-05 31.5 1.1 21 254-274 21-45 (114)
57 1rju_V Metallothionein; Cu(I)- 64.5 4 0.00014 22.9 1.9 19 253-272 8-26 (36)
58 4d90_A EGF-like repeat and dis 64.4 1.8 6E-05 33.0 0.6 27 247-274 53-90 (143)
59 2w2n_E LDL receptor, low-densi 64.2 1.4 4.8E-05 32.4 0.0 26 247-274 70-99 (107)
60 1jlp_A PSI-conotoxin PIIIF; mu 64.2 4.9 0.00017 20.9 2.1 19 248-266 3-21 (26)
61 2bou_A EGF-like module contain 61.1 1.2 4.2E-05 34.1 -0.9 28 247-274 97-129 (143)
62 1g1s_A P-selectin; selectin, l 60.9 1.1 3.7E-05 35.0 -1.2 27 247-274 120-150 (162)
63 2vj3_A Neurogenic locus notch 60.0 2.4 8.1E-05 32.2 0.6 27 247-274 84-114 (135)
64 2wg3_C Hedgehog-interacting pr 59.2 1.9 6.6E-05 40.1 -0.0 21 254-274 429-450 (463)
65 3cfw_A L-selectin; EGF, cell a 59.1 2.2 7.4E-05 33.3 0.3 26 248-274 121-150 (164)
66 2ygq_A WIF-1, WNT inhibitory f 58.0 3.8 0.00013 36.2 1.7 22 253-274 153-175 (324)
67 2ygq_A WIF-1, WNT inhibitory f 57.6 6.3 0.00021 34.8 3.0 22 253-274 217-239 (324)
68 1lmj_A Fibrillin 1; EGF, calci 57.5 2.5 8.6E-05 29.4 0.3 26 247-273 4-34 (86)
69 2vj2_A Jagged-1; signalling, p 57.2 1.6 5.4E-05 34.7 -0.9 28 247-274 132-164 (169)
70 2bou_A EGF-like module contain 54.8 1.6 5.5E-05 33.4 -1.2 28 247-274 45-78 (143)
71 2vj3_A Neurogenic locus notch 54.8 3.2 0.00011 31.4 0.6 27 247-274 46-76 (135)
72 3k6s_B Integrin beta-2; cell r 53.6 7.4 0.00025 38.1 3.0 21 254-274 567-587 (687)
73 2w86_A Fibrillin-1, fibrillin1 51.8 1.9 6.4E-05 33.2 -1.3 27 247-274 108-139 (147)
74 3q7m_A Lipoprotein YFGL, BAMB; 51.5 32 0.0011 29.6 6.7 16 91-106 327-343 (376)
75 1z1y_A Ookinete surface protei 50.9 1.9 6.4E-05 34.6 -1.4 28 247-274 45-84 (186)
76 3p5b_L Low density lipoprotein 49.8 8.9 0.0003 34.4 2.8 26 247-274 41-70 (400)
77 3q7m_A Lipoprotein YFGL, BAMB; 47.7 95 0.0032 26.5 9.2 72 36-107 27-129 (376)
78 2p28_B Integrin beta-2; hybrid 45.7 3.7 0.00013 34.2 -0.4 22 253-274 96-117 (217)
79 1z1y_A Ookinete surface protei 45.2 3.6 0.00012 32.9 -0.6 26 247-274 140-170 (186)
80 1xkp_C Chaperone protein YSCB; 44.8 32 0.0011 26.4 4.7 45 53-97 23-94 (143)
81 1dx5_I Thrombomodulin; serine 44.6 2.7 9.2E-05 31.2 -1.4 26 247-274 81-110 (118)
82 2gy5_A Angiopoietin-1 receptor 44.5 7 0.00024 35.9 1.2 27 248-274 245-273 (423)
83 2p28_B Integrin beta-2; hybrid 44.1 3.6 0.00012 34.3 -0.7 21 254-274 187-209 (217)
84 2ddu_A Reelin; beta-jelly-roll 44.0 2.5 8.5E-05 38.4 -1.9 26 247-274 192-217 (387)
85 1uzk_A Fibrillin-1; glycoprote 43.6 2.6 9E-05 32.9 -1.6 27 247-274 123-154 (162)
86 3isy_A Bsupi, intracellular pr 43.5 86 0.0029 23.3 7.0 12 135-147 89-100 (120)
87 1aqs_A Cu-MT, Cu-metallothione 41.5 15 0.00052 22.2 2.0 19 253-272 12-30 (53)
88 2jkh_L Factor X light chain; p 39.6 5.4 0.00019 25.3 -0.3 25 247-273 2-31 (55)
89 3zyj_B Netrin-G1; cell adhesio 39.6 6.2 0.00021 36.3 0.0 22 253-274 371-393 (426)
90 3hxj_A Pyrrolo-quinoline quino 39.3 39 0.0013 28.0 5.1 54 53-106 227-289 (330)
91 1mct_I Trypsin inhibitor A; co 39.2 7 0.00024 21.4 0.2 22 252-274 7-28 (28)
92 2juy_A Neopetrosiamide A; amph 37.8 8 0.00027 20.5 0.3 15 254-268 11-28 (28)
93 1yo8_A Thrombospondin-2; EGF, 37.7 8.2 0.00028 37.4 0.5 29 246-274 44-81 (634)
94 3hxj_A Pyrrolo-quinoline quino 37.2 52 0.0018 27.2 5.6 71 38-108 127-211 (330)
95 1g1t_A E-selectin; EGF, adhesi 36.3 4.1 0.00014 31.2 -1.5 27 247-274 120-150 (157)
96 1yo8_A Thrombospondin-2; EGF, 36.0 7.6 0.00026 37.7 -0.0 29 246-274 102-139 (634)
97 4aqs_A Laminin subunit beta-1; 35.9 19 0.00066 33.7 2.8 26 249-274 443-470 (525)
98 2gy5_A Angiopoietin-1 receptor 35.8 15 0.00051 33.7 1.9 26 249-274 289-315 (423)
99 3k6s_B Integrin beta-2; cell r 35.2 8.4 0.00029 37.7 0.2 23 252-274 434-456 (687)
100 3asi_A Neurexin-1-alpha; beta- 34.6 11 0.00038 33.9 0.8 28 246-274 185-217 (410)
101 3fcs_B Integrin beta-3; beta p 34.5 15 0.0005 36.0 1.8 28 247-274 526-555 (690)
102 2lix_A IMKTX104, potassium cha 40.2 8.6 0.00029 20.2 0.0 12 258-269 16-27 (27)
103 2e26_A Reelin, reeler protein; 33.7 5.5 0.00019 39.1 -1.4 23 252-274 189-212 (725)
104 2hjj_A Hypothetical protein YK 33.2 33 0.0011 23.9 2.8 19 93-111 38-56 (87)
105 3elq_A Arylsulfate sulfotransf 33.1 88 0.003 29.8 6.8 35 62-96 227-264 (571)
106 3fcs_B Integrin beta-3; beta p 32.2 14 0.00049 36.1 1.3 24 251-274 444-468 (690)
107 1x7a_L Coagulation factor IX, 31.9 20 0.00069 27.5 1.8 25 247-273 86-116 (146)
108 2ad6_A Methanol dehydrogenase 30.2 1.6E+02 0.0053 27.6 8.1 70 38-107 41-141 (571)
109 3h5c_B Vitamin K-dependent pro 30.1 16 0.00053 31.5 1.0 26 247-274 44-75 (317)
110 2kl7_A Fibulin-4; secreted, ca 29.6 8.5 0.00029 25.9 -0.6 16 247-262 4-20 (71)
111 1nzi_A Complement C1S componen 28.0 63 0.0021 24.4 4.2 26 246-273 117-148 (159)
112 1flg_A Protein (quinoprotein e 25.5 2E+02 0.0069 26.9 8.0 71 37-107 44-143 (582)
113 1kv9_A Type II quinohemoprotei 24.9 1.6E+02 0.0055 28.0 7.3 70 38-107 45-143 (668)
114 1szb_A Mannose binding lectin- 24.1 57 0.0019 25.1 3.3 26 246-273 124-157 (170)
115 3fvz_A Peptidyl-glycine alpha- 24.0 2.7E+02 0.0093 23.1 8.0 47 53-99 94-162 (329)
116 1w6s_A Methanol dehydrogenase 23.1 2.1E+02 0.007 27.1 7.6 70 38-107 41-147 (599)
117 1ob1_C Major merozoite surface 22.2 28 0.00097 25.1 1.0 28 247-274 47-84 (99)
118 3v65_B Low-density lipoprotein 22.2 21 0.00072 31.6 0.4 25 247-273 45-73 (386)
119 1kb0_A Quinohemoprotein alcoho 22.1 1.8E+02 0.006 27.9 7.0 71 37-107 55-154 (677)
120 3fvz_A Peptidyl-glycine alpha- 21.9 2.2E+02 0.0074 23.7 6.9 43 60-102 68-112 (329)
121 1yiq_A Quinohemoprotein alcoho 21.7 1.9E+02 0.0066 27.6 7.2 70 38-107 49-147 (689)
122 3hrp_A Uncharacterized protein 21.5 2.4E+02 0.0082 24.8 7.4 52 55-106 328-405 (409)
123 3qcw_A Neurexin-1-alpha; synap 21.4 29 0.00098 36.2 1.2 27 247-274 1018-1049(1245)
124 3u1j_A Serine protease subunit 21.2 69 0.0024 20.1 2.5 38 62-100 6-46 (51)
125 1kig_L Factor XA; glycoprotein 21.1 22 0.00076 22.0 0.2 10 264-273 19-28 (51)
126 3odt_A Protein DOA1; ubiquitin 21.0 3.1E+02 0.011 21.7 7.9 54 53-106 229-293 (313)
127 4fbr_A Lectin, myxobacterial h 20.7 8.3 0.00028 33.2 -2.5 26 249-274 168-197 (267)
128 1lu0_A CMTI-I, trypsin inhibit 20.6 48 0.0017 18.2 1.4 9 264-272 18-27 (29)
No 1
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=100.00 E-value=9.3e-40 Score=290.58 Aligned_cols=196 Identities=22% Similarity=0.307 Sum_probs=149.5
Q ss_pred CeeccccCCCCCceEEEEEEeeeccccccccccCCCCcEEEEcCCCCCCCC-----CcEEEEecCCcEEE--EcCCCCEE
Q 040039 1 YACGFFCNGTCDSYLFAVFIVQAYNASLIDYQHIEFPQVVWSANRNNPVRI-----NATLELTSDGNLVL--QDADGAIA 73 (274)
Q Consensus 1 F~lGFf~~~~~~~~~l~iw~~~~~~~~~~~~~~~~~~~vVWvANr~~Pv~~-----~~~l~~~~~G~L~l--~~~~~~~~ 73 (274)
||||||+.+ +.|| |+ +.+ +||+|||++||.+ .++|+|+.||+|+| .|+++.+|
T Consensus 36 F~lgf~~~~---~~~l---y~-------------~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~~~~~v 95 (276)
T 3m7h_A 36 FKLLLQGDG---NLVI---QD-------------NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRV 95 (276)
T ss_dssp EEEEECTTS---CEEE---EE-------------TTE-EEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEGGGTEE
T ss_pred EEEEEECCC---CeEE---EC-------------CCC-eEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCCCCCEE
Confidence 899999432 5566 64 456 9999999999987 57899999999999 78888999
Q ss_pred EeecCCC------CceeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCc----ccCCceEeeecCCCCCCCCcceE
Q 040039 74 WSTNTSG------KSVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQK----LLEGKKLTASVSTTNWTDGGLFS 143 (274)
Q Consensus 74 Wss~~~~------~~~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~----l~~~~~L~Sw~s~~dps~~G~ys 143 (274)
|++++.. ...+.|+|+|+|||||+| +.+|||| ||||||||||+ |..+++| ++.+||++ |.|+
T Consensus 96 Wst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L---~S~~dps~-G~fs 167 (276)
T 3m7h_A 96 WLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPGSEL---VQGVVYGA-GASK 167 (276)
T ss_dssp EEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSSEEE---CTTCEEEE-TTEE
T ss_pred EEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccCccc---ccCCCCCC-ceEE
Confidence 9999764 345789999999999998 7899999 99999999999 7788888 56789999 9999
Q ss_pred EEecCCCceEEEecCCCeEEEecccCCCCcCCCcceeeee-cCceEEEeecCCCCCceEEEEecCCCCCCeEEEEEcCCC
Q 040039 144 LSVTNEGLFAFIESNNTSIRYYALVKATKTSKEPSHARYL-NGSLAFFINSSEPREPDGAVPVPPASSSPGQYMRLWPDG 222 (274)
Q Consensus 144 l~~d~~g~~~~~~~~~~~~Yw~sg~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~Ld~dG 222 (274)
++||++|...++ .+...+||++++++... .++.+. .|.+.++... ...+..+..... ..+|++|+.||
T Consensus 168 l~l~~dGnlvLy-~~~~~~yW~Sgt~~~~~----~~l~l~~dGnLvl~d~~----~~~vWsS~t~~~--~~~rl~Ld~dG 236 (276)
T 3m7h_A 168 LVFQGDGNLVAY-GPNGAATWNAGTQGKGA----VRAVFQGDGNLVVYGAG----NAVLWHSHTGGH--ASAVLRLQANG 236 (276)
T ss_dssp EEECTTSCEEEE-CTTSSEEEECCCTTTTC----CEEEECTTSCEEEECTT----SCEEEECSCTTC--TTCEEEECTTS
T ss_pred EeecCCceEEEE-eCCCeEEEECCCCCCcc----EEEEEcCCCeEEEEeCC----CcEEEEecCCCC--CCEEEEEcCCc
Confidence 999999864442 34468999999886421 233333 5667664321 122323332222 25799999999
Q ss_pred CeEEEEEcCCCCeEE
Q 040039 223 HLRVYEWQASIGWTE 237 (274)
Q Consensus 223 ~lr~y~w~~~~~W~~ 237 (274)
++++|.| ...|..
T Consensus 237 nLvly~~--~~~Wqs 249 (276)
T 3m7h_A 237 SIAILDE--KPVWAR 249 (276)
T ss_dssp CEEEEEE--EEEEES
T ss_pred cEEEEcC--CCeEEc
Confidence 9999998 234554
No 2
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=100.00 E-value=1.8e-33 Score=244.83 Aligned_cols=190 Identities=19% Similarity=0.225 Sum_probs=135.8
Q ss_pred CeeccccCCCCCceEEEEEEeeeccccccccccCCCCcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCC
Q 040039 1 YACGFFCNGTCDSYLFAVFIVQAYNASLIDYQHIEFPQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSG 80 (274)
Q Consensus 1 F~lGFf~~~~~~~~~l~iw~~~~~~~~~~~~~~~~~~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~ 80 (274)
|+|||+.+++ + ++|. .+++||+|||+.| ..+.|+|+.||+|||+|.++.+||++++..
T Consensus 28 f~l~f~~~gn-----l-~ly~--------------~~~~vW~an~~~~--~~~~l~l~~dGnLvl~d~~~~~vW~s~~~~ 85 (236)
T 1dlp_A 28 FRFTMQSDCN-----L-VLFD--------------SDVRVWASNTAGA--TGCRAVLQSDGLLVILTAQNTIRWSSGTKG 85 (236)
T ss_dssp EEEEECTTSC-----E-EEEE--------------SSSEEECCCCCSC--SCCBCCBCSSSCBCCBCTTTCCSCCCCCCC
T ss_pred EEEEECCCCc-----E-EEEE--------------CCEEEEECCCCCC--CCeEEEEcCCCcEEEEcCCCcEEEeCCccc
Confidence 7899986543 1 2453 2689999999988 558999999999999999999999999764
Q ss_pred C-ceeEEEEeeCCCeeEecCCCceEEeecCCCCCcc----------cCCCcccCC-ceEeeecCCCCCCCCcceEEEecC
Q 040039 81 K-SVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSL----------VPGQKLLEG-KKLTASVSTTNWTDGGLFSLSVTN 148 (274)
Q Consensus 81 ~-~~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTl----------Lpgq~l~~~-~~L~Sw~s~~dps~~G~ysl~~d~ 148 (274)
. ....|+|+|+|||||++. ++|||||||+||+ +|||+++.+ ++|+ +.+||++ |.|+|+|++
T Consensus 86 ~~~~~~~~l~d~Gnlvl~~~---~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~~L~---s~~d~s~-G~~~l~l~~ 158 (236)
T 1dlp_A 86 SIGNYVLVLQPDRTVTIYGP---GLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLH---ATQSLQL-SPYRLSMET 158 (236)
T ss_dssp CSSCCEEEECSSSCEEEECS---EEEECSCCCSSCCCCSSCCCEECCCC--CCCCCCEEC---SSCCCBC-SSCEEEEET
T ss_pred cCCcEEEEEeCCCCEEEecC---CEEECCCCCCcccccCCccceEEecCCcCCCccceEE---cCcEeec-CcEEEEECC
Confidence 3 335789999999999953 8999999998665 666666543 4676 4689999 999999999
Q ss_pred CCceEEEecCCCeEEEecccCCCCcCCCcceeeeecCceEEEeecCCCCCceEEEEecCCCCCCeEEEEEcCCCCeEEEE
Q 040039 149 EGLFAFIESNNTSIRYYALVKATKTSKEPSHARYLNGSLAFFINSSEPREPDGAVPVPPASSSPGQYMRLWPDGHLRVYE 228 (274)
Q Consensus 149 ~g~~~~~~~~~~~~Yw~sg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~Ld~dG~lr~y~ 228 (274)
+|. +++.+...+||++++|+.... ....+ ..+|.+.++.. .. ..+..++.... ...+|++|++||++++|.
T Consensus 159 dG~--LvL~~~~~~~W~s~~~~~~~~-~~~~L-~~~Gnl~ly~~---~~-~~vw~s~~~~~-~~~~rl~Ld~dG~l~ly~ 229 (236)
T 1dlp_A 159 DCN--LVLFDRDDRVWSTNTAGKGTG-CRAVL-QPNGRMDVLTN---QN-IAVWTSGNSRS-AGRYVFVLQPDRNLAIYG 229 (236)
T ss_dssp TTE--EEEEBTTBCCSCCCCCSSCSS-CEEEE-ETTTEEEEEET---TT-EEEEECCCCCS-SSCCEEEECSSSCEEEEC
T ss_pred CCc--EEEEcCCEeEEeCCCcCCCCc-eEEEE-CCCCcEEEEeC---CC-cEEEEeCCCCC-CCCEEEEEcCCCcEEEeC
Confidence 994 444555679999999864322 21222 23566666542 11 22222222211 136799999999999984
No 3
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=99.74 E-value=2.2e-17 Score=125.74 Aligned_cols=69 Identities=25% Similarity=0.539 Sum_probs=61.1
Q ss_pred CCcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCC-CceeEEEEeeCCCeeEecCCCceEEee
Q 040039 36 FPQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSG-KSVVGLNLTDMGNLVLFDKNNAAVWQS 107 (274)
Q Consensus 36 ~~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~-~~~~~~~l~d~GNlvl~~~~~~~lWqS 107 (274)
..++||+|||+.|....+.|+|+.||+|||+|+++.+||++++.. .....|+|+|+|||||++ .+||||
T Consensus 36 ~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t~~~~~~~~l~L~ddGNlVly~---~~~W~S 105 (105)
T 4h3o_A 36 HSTSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHSTRGSGNYILILQDDGNVIIYG---SDIWST 105 (105)
T ss_dssp TTEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCCCCCSSCEEEEECTTSCEEEEE---SEEEEC
T ss_pred CCEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecCCCCCCCEEEEEeCCCeEEEEC---CcEecC
Confidence 357899999999988889999999999999999999999999864 344678999999999996 479997
No 4
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=99.73 E-value=1.9e-17 Score=127.45 Aligned_cols=95 Identities=22% Similarity=0.393 Sum_probs=76.4
Q ss_pred CCCCC-cEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCc
Q 040039 48 PVRIN-ATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGK 125 (274)
Q Consensus 48 Pv~~~-~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~ 125 (274)
|+.+. .+|.|+.||+|+|++. +.+||++++.+.. ...|+|+|+|||||+| ++.++||||+.
T Consensus 15 ~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~~~~~W~S~~~--------------- 77 (112)
T 1xd5_A 15 SLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-GSRAIWASNTN--------------- 77 (112)
T ss_dssp EEEETTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-TTEEEEECCCC---------------
T ss_pred EEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-CCEEEEECCcc---------------
Confidence 44344 7999999999999986 7899999986432 3678999999999999 78899999943
Q ss_pred eEeeecCCCCCCCCcceEEEecCCCceEEEecCCCeEEEecccCCC
Q 040039 126 KLTASVSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALVKAT 171 (274)
Q Consensus 126 ~L~Sw~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~~~~ 171 (274)
+++ |.|+++|+++|...++ .....+||++++|++
T Consensus 78 ----------~~~-g~~~l~l~~dGnlvl~-~~~~~~~W~S~~~~g 111 (112)
T 1xd5_A 78 ----------RQN-GNYYLILQRDRNVVIY-DNSNNAIWATHTNVG 111 (112)
T ss_dssp ----------CSC-CCCEEEECTTSCEEEE-CTTSCEEEECCCCCC
T ss_pred ----------CCC-CCEEEEEeCCCcEEEE-CCCCceEEECCCccC
Confidence 345 8999999999984443 234679999998864
No 5
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=99.73 E-value=1.3e-17 Score=128.10 Aligned_cols=88 Identities=26% Similarity=0.437 Sum_probs=72.1
Q ss_pred CCcEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCceEee
Q 040039 51 INATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGKKLTA 129 (274)
Q Consensus 51 ~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~~L~S 129 (274)
...+|.|+.||+|+|++ .+.+||++++.... ...++|+|+|||||+|.++.++||||.
T Consensus 20 ~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~~~~~W~S~t-------------------- 78 (110)
T 3a0c_A 20 PSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKT-------------------- 78 (110)
T ss_dssp TTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCC--------------------
T ss_pred CCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCCCcEEEecCC--------------------
Confidence 34799999999999999 57899999986443 357899999999999988899999993
Q ss_pred ecCCCCCCCCcceEEEecCCCceEEEecCCCeEEEecccC
Q 040039 130 SVSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALVK 169 (274)
Q Consensus 130 w~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~~ 169 (274)
++++ |.|+++|+++|...+ .+. +||+++..
T Consensus 79 -----~~~~-g~~~l~l~~dGnlvl--~~~--~~W~S~~~ 108 (110)
T 3a0c_A 79 -----NGKE-DHYVLVLQQDRNVVI--YGP--VVWATGSG 108 (110)
T ss_dssp -----CCSS-SCCEEEECTTSCEEE--ECS--EEEECSCC
T ss_pred -----CCCC-CCEEEEEeCCccEEE--ECC--CEecCCCc
Confidence 4456 999999999997544 333 89998753
No 6
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=99.70 E-value=1.2e-16 Score=122.59 Aligned_cols=71 Identities=31% Similarity=0.550 Sum_probs=61.2
Q ss_pred CcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCCC-ceeEEEEeeCCCeeEecCCCceEEeecCCC
Q 040039 37 PQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSGK-SVVGLNLTDMGNLVLFDKNNAAVWQSFDHP 111 (274)
Q Consensus 37 ~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~-~~~~~~l~d~GNlvl~~~~~~~lWqSFd~P 111 (274)
.++||+||++.|. ..+.++|+++|||||+|.++.++|++.+... +...++|+|+|||||++. ++||||+||
T Consensus 38 ~~~vW~sn~~~~~-~~~~l~l~~dGNLVl~~~~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~ 109 (110)
T 3a0c_A 38 GKPVWASNTGGLG-SGCRLTLHNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP---VVWATGSGP 109 (110)
T ss_dssp TEEEEECCCTTSC-SSCEEEECTTSCEEEECTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEEECSCCC
T ss_pred CEEEEECCCCCCC-CcEEEEEeCCCCEEEECCCCcEEEecCCCCCCCCEEEEEeCCccEEEECC---CEecCCCcC
Confidence 6899999998763 3478999999999999988899999998643 345789999999999974 899999998
No 7
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=99.69 E-value=2.1e-16 Score=122.97 Aligned_cols=85 Identities=26% Similarity=0.328 Sum_probs=70.8
Q ss_pred cEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCceEeeec
Q 040039 53 ATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGKKLTASV 131 (274)
Q Consensus 53 ~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~~L~Sw~ 131 (274)
.+|.|+.||+|+|++. +.+||++++.... ...++|+|+|||||+|.++.++||||.
T Consensus 32 ~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~~~~lW~S~~---------------------- 88 (119)
T 1b2p_A 32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPV---------------------- 88 (119)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSC----------------------
T ss_pred EEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCCCcEEEcCCC----------------------
Confidence 6899999999999986 7899999986543 367899999999999988899999993
Q ss_pred CCCCCCCCcceEEEecCCCceEEEecCCCeEEEeccc
Q 040039 132 STTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALV 168 (274)
Q Consensus 132 s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~ 168 (274)
++++ |.|+++|+++|...+. . .+||++++
T Consensus 89 ---~~~~-g~~~l~l~~~Gnlvl~--~--~~~W~Sg~ 117 (119)
T 1b2p_A 89 ---AGKA-GHYVLVLQPDRNVVIY--G--DALWATQT 117 (119)
T ss_dssp ---CCCS-SCEEEEECTTSCEEEE--E--SEEEECCC
T ss_pred ---CCCC-CCEEEEEECCCcEEEE--C--ccEeCCCC
Confidence 4556 9999999999974443 3 38999885
No 8
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=99.67 E-value=4.1e-16 Score=120.54 Aligned_cols=73 Identities=25% Similarity=0.463 Sum_probs=61.9
Q ss_pred CcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCC-CceeEEEEeeCCCeeEecCCCceEEeecCCCCC
Q 040039 37 PQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSG-KSVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTD 113 (274)
Q Consensus 37 ~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~-~~~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtD 113 (274)
.++||+|||+.|. ..+.|+|+++|||||+|.++.++|++.+.. .....++|+|+|||||++. ++||||.++..
T Consensus 38 ~~~vW~sn~~~~~-~~~~l~l~~~GnLvl~d~~~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~~ 111 (115)
T 2dpf_A 38 GRQIWASNTDRRG-SGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGP---VLWSLGPNGCR 111 (115)
T ss_dssp TEEEEECSCTTSC-SSCEEEECTTSCEEEECTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEECSSTTCBC
T ss_pred CEEEEeCCCCCCC-CceEEEECCCCcEEEECCCceEEEEcCCCCCCCCEEEEEeCCCeEEEECC---CEEECCCCCCc
Confidence 6799999999883 348999999999999998889999998763 3345789999999999964 89999988653
No 9
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=99.67 E-value=5.3e-16 Score=119.91 Aligned_cols=89 Identities=28% Similarity=0.461 Sum_probs=73.8
Q ss_pred CcEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCceEeee
Q 040039 52 NATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGKKLTAS 130 (274)
Q Consensus 52 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~~L~Sw 130 (274)
..+|.|+.||+|+|++ .+.+||++++.... ...++|+++|||||+|.++.++||||++|
T Consensus 21 ~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~~~~vW~S~~~~------------------- 80 (115)
T 2dpf_A 21 AYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACWG------------------- 80 (115)
T ss_dssp TEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCC-------------------
T ss_pred CEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCCceEEEEcCCCC-------------------
Confidence 4789999999999998 57899999986433 35789999999999998888999999973
Q ss_pred cCCCCCCCCcceEEEecCCCceEEEecCCCeEEEecccCCC
Q 040039 131 VSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALVKAT 171 (274)
Q Consensus 131 ~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~~~~ 171 (274)
++ |.|+++|+++|...+ .+. +||++++|..
T Consensus 81 ------~~-g~~~l~l~~dGnlvl--~~~--~~W~S~~~~~ 110 (115)
T 2dpf_A 81 ------DN-GKYALVLQKDGRFVI--YGP--VLWSLGPNGC 110 (115)
T ss_dssp ------SS-SCCEEEECTTSCEEE--ECS--EEECSSTTCB
T ss_pred ------CC-CCEEEEEeCCCeEEE--ECC--CEEECCCCCC
Confidence 34 899999999998544 333 8999999854
No 10
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=99.66 E-value=7.4e-16 Score=118.53 Aligned_cols=73 Identities=27% Similarity=0.547 Sum_probs=61.4
Q ss_pred CcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCCC-ceeEEEEeeCCCeeEecCCCceEEeecCCC
Q 040039 37 PQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSGK-SVVGLNLTDMGNLVLFDKNNAAVWQSFDHP 111 (274)
Q Consensus 37 ~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~-~~~~~~l~d~GNlvl~~~~~~~lWqSFd~P 111 (274)
.++||+||++.+ ...+.++|.++|||||+| ++.++|++.+... +...++|+++|||||++..+.++||||++.
T Consensus 37 ~~~vW~sn~~~~-~~~~~l~l~~~GNLvl~d-~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~~~~~~W~S~~~~ 110 (112)
T 1xd5_A 37 NRAVWASGTNGK-ASGCVLKMQNDGNLVIYS-GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNV 110 (112)
T ss_dssp TEEEEECCCTTS-CSSEEEEECTTSCEEEEE-TTEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCC
T ss_pred CEEEEeCCCcCC-CCCEEEEEeCCCCEEEEc-CCEEEEECCccCCCCCEEEEEeCCCcEEEECCCCceEEECCCcc
Confidence 589999999853 234789999999999999 7789999987543 345789999999999987778999999985
No 11
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=99.64 E-value=1.8e-15 Score=117.69 Aligned_cols=84 Identities=21% Similarity=0.372 Sum_probs=68.0
Q ss_pred CeeccccCCCCCceEEEEEEeeeccccccccccCCCCcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCC
Q 040039 1 YACGFFCNGTCDSYLFAVFIVQAYNASLIDYQHIEFPQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSG 80 (274)
Q Consensus 1 F~lGFf~~~~~~~~~l~iw~~~~~~~~~~~~~~~~~~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~ 80 (274)
|+|+|+..++ -++|. . .++||+|||+.| ...+.|+|++||||||+|.++.++|++.+..
T Consensus 32 ~~L~~~~dgn------lvly~-------------~-~~~vW~sn~~~~-~~~~~l~l~~dGNLVl~d~~~~~lW~S~~~~ 90 (119)
T 1b2p_A 32 YRFIMQTDCN------LVLYD-------------N-NNPIWATNTGGL-GNGCRAVLQPDGVLVVITNENVTVWQSPVAG 90 (119)
T ss_dssp EEEEECTTSC------EEEEE-------------T-TEEEEECCCTTS-CSSCEEEECTTSCEEEECTTCCEEEECSCCC
T ss_pred EEEEEecCCC------EEEEE-------------C-CEEEEeCCCccC-CCceEEEEccCCEEEEEeCCCcEEEcCCCCC
Confidence 6788887654 24664 2 689999999876 3348999999999999998899999999764
Q ss_pred C-ceeEEEEeeCCCeeEecCCCceEEeec
Q 040039 81 K-SVVGLNLTDMGNLVLFDKNNAAVWQSF 108 (274)
Q Consensus 81 ~-~~~~~~l~d~GNlvl~~~~~~~lWqSF 108 (274)
. +...++|+|+|||||++ .++|||=
T Consensus 91 ~~g~~~l~l~~~Gnlvl~~---~~~W~Sg 116 (119)
T 1b2p_A 91 KAGHYVLVLQPDRNVVIYG---DALWATQ 116 (119)
T ss_dssp CSSCEEEEECTTSCEEEEE---SEEEECC
T ss_pred CCCCEEEEEECCCcEEEEC---ccEeCCC
Confidence 3 35678999999999997 3899983
No 12
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=99.56 E-value=1.3e-14 Score=111.09 Aligned_cols=69 Identities=26% Similarity=0.470 Sum_probs=58.0
Q ss_pred CcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecC
Q 040039 37 PQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFD 109 (274)
Q Consensus 37 ~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd 109 (274)
.++||+||++.+ ...+.|+|++||||||+|.++.++|++++.... ...|+|+|+|||||++. ++|+|-.
T Consensus 37 ~~~vW~snt~~~-~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~---~~W~s~t 106 (109)
T 3dzw_A 37 DKPIWATNTGGL-DRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGT---ARWATGT 106 (109)
T ss_dssp TEEEEECCCTTS-SSSCEEEECTTSCEEEECTTSCEEEECCCCCSSSCEEEEECTTSCEEEEES---CCCCCCC
T ss_pred CEEEEECCcccC-CCCEEEEEeCCCCEEEECCCCCEEEECCCCCCCCCEEEEEeCCCEEEEECC---CEEeCCC
Confidence 578999999876 234799999999999999888999999986543 35789999999999974 8999843
No 13
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.50 E-value=1.5e-13 Score=105.70 Aligned_cols=94 Identities=22% Similarity=0.300 Sum_probs=73.5
Q ss_pred CCCCCCCC-cEEEEecCCcEEEEcC-CCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcc
Q 040039 45 RNNPVRIN-ATLELTSDGNLVLQDA-DGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKL 121 (274)
Q Consensus 45 r~~Pv~~~-~~l~~~~~G~L~l~~~-~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l 121 (274)
.++|+.+. .+|.|+.||||||++. .+.++|++++.+.. ...++|+|+|||||+|.++.++|||-.+-
T Consensus 17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~---------- 86 (113)
T 3mez_B 17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTVG---------- 86 (113)
T ss_dssp TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCCC----------
T ss_pred CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCcC----------
Confidence 45566655 7999999999999987 47899999986532 35789999999999998888999983210
Q ss_pred cCCceEeeecCCCCCCCCcceEEEecCCCceEEEecCCCeEEEeccc
Q 040039 122 LEGKKLTASVSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALV 168 (274)
Q Consensus 122 ~~~~~L~Sw~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~ 168 (274)
.. |.|.+.++.+|.+.++. .+.|.+++
T Consensus 87 ---------------~~-~~~~~~L~~dGnlvly~----~~~W~s~~ 113 (113)
T 3mez_B 87 ---------------QE-GDYVLILQINGQAVVYG----PAVWSTAA 113 (113)
T ss_dssp ---------------SS-SCCEEEECTTSCEEEEC----SEEEESCC
T ss_pred ---------------CC-CCEEEEEcCCceEEEec----CCEecCCC
Confidence 12 67899999999877653 57898763
No 14
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.45 E-value=3.1e-13 Score=103.68 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=70.9
Q ss_pred CCCCCC-cEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCc-eEEeecCCCCCcccCCCcccC
Q 040039 47 NPVRIN-ATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNA-AVWQSFDHPTDSLVPGQKLLE 123 (274)
Q Consensus 47 ~Pv~~~-~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~-~lWqSFd~PtDTlLpgq~l~~ 123 (274)
.++... ..|.|+.||||||++.++ +|++++.+.. ...++|+|+|||||++.++. ++|+|..+
T Consensus 15 ~~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~------------- 79 (111)
T 3mez_A 15 NQLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRS------------- 79 (111)
T ss_dssp CEEEETTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSS-------------
T ss_pred CEEecCCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccc-------------
Confidence 344444 799999999999999766 9999986543 36789999999999998765 59999621
Q ss_pred CceEeeecCCCCCCCCcceEEEecCCCceEEEecCCCeEEEeccc
Q 040039 124 GKKLTASVSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALV 168 (274)
Q Consensus 124 ~~~L~Sw~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~ 168 (274)
..... |.|.+.++.+|.+.++. .++|.+++
T Consensus 80 ----------~~~~~-~~~~l~Lq~dGNlvly~----~~~W~s~t 109 (111)
T 3mez_A 80 ----------VNTVR-GNYAATLGPDQHVTIYG----PAIWSTPA 109 (111)
T ss_dssp ----------CCCCS-SCCEEEECTTSCEEEEC----SEEEECCC
T ss_pred ----------cCCCC-cCEEEEECCCCeEEEec----cCEEccCC
Confidence 01123 78999999999877663 67998874
No 15
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.44 E-value=3.9e-13 Score=103.41 Aligned_cols=68 Identities=24% Similarity=0.390 Sum_probs=57.5
Q ss_pred CCcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCCC-ceeEEEEeeCCCeeEecCCCceEEee
Q 040039 36 FPQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSGK-SVVGLNLTDMGNLVLFDKNNAAVWQS 107 (274)
Q Consensus 36 ~~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~-~~~~~~l~d~GNlvl~~~~~~~lWqS 107 (274)
..++||++|+..+- ..+.|.|+++|||||+|.++.++|++++... ....|+|+|+|||||++ ..+|+|
T Consensus 43 ~~~~vWssnt~~~~-~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~---~~~W~s 111 (113)
T 3mez_B 43 KTNIVWESGTSGRG-QHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYG---PAVWST 111 (113)
T ss_dssp TTEEEEECCCTTSC-SSCEEEECTTSCEEEECTTSCEEEECSCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred CCEEEEECCcccCC-cCEEEEEeCCCcEEEECCCCCEEEECCCcCCCCCEEEEEcCCceEEEec---CCEecC
Confidence 36799999998652 2479999999999999988899999998643 33678999999999997 689997
No 16
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.37 E-value=1.2e-12 Score=100.24 Aligned_cols=66 Identities=27% Similarity=0.468 Sum_probs=54.8
Q ss_pred cEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCCC-ceeEEEEeeCCCeeEecCCCceEEee
Q 040039 38 QVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSGK-SVVGLNLTDMGNLVLFDKNNAAVWQS 107 (274)
Q Consensus 38 ~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~-~~~~~~l~d~GNlvl~~~~~~~lWqS 107 (274)
.+||++|++.. ...+.|+|+++|||||+|.++.++|++++... ....|+|+|+|||||++ .++|+|
T Consensus 42 ~~vW~snt~~~-~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~---~~~W~t 108 (110)
T 3r0e_B 42 KYGWQSNTHGN-GEHCFLRLNHKGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG---PAIFET 108 (110)
T ss_dssp SSCEECCCTTS-SSSCEEEECTTSCEEEECTTCCEEEECCCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred eEEEECCCcCC-CcCEEEEEeCCCcEEEEeCCCCEEEEcCCcCCCCCEEEEEcCCccEEEec---CCEecC
Confidence 47899999862 22379999999999999988899999998543 33578999999999997 589997
No 17
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=99.36 E-value=3.7e-12 Score=97.25 Aligned_cols=85 Identities=25% Similarity=0.404 Sum_probs=67.1
Q ss_pred CcEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCceEeee
Q 040039 52 NATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGKKLTAS 130 (274)
Q Consensus 52 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~~L~Sw 130 (274)
...|.|+.||+|+|++. +.++|++++.+.. ...++|+++|||||+|.++.++|||....
T Consensus 20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~------------------- 79 (109)
T 3dzw_A 20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGG------------------- 79 (109)
T ss_dssp TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCC-------------------
T ss_pred CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCC-------------------
Confidence 37899999999999986 6899999986543 36789999999999998888999985321
Q ss_pred cCCCCCCCCcceEEEecCCCceEEEecCCCeEEEecc
Q 040039 131 VSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYAL 167 (274)
Q Consensus 131 ~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg 167 (274)
.. +.|++.++.+|.+.++. .+.|.++
T Consensus 80 ------~~-~~~~~~L~ddGNlvly~----~~~W~s~ 105 (109)
T 3dzw_A 80 ------EN-GNYVCVLQKDRNVVIYG----TARWATG 105 (109)
T ss_dssp ------SS-SCEEEEECTTSCEEEEE----SCCCCCC
T ss_pred ------CC-CCEEEEEeCCCEEEEEC----CCEEeCC
Confidence 12 57899999999876653 2567665
No 18
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.35 E-value=3.9e-12 Score=97.35 Aligned_cols=84 Identities=25% Similarity=0.436 Sum_probs=67.3
Q ss_pred CcEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCceEeee
Q 040039 52 NATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGKKLTAS 130 (274)
Q Consensus 52 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~~L~Sw 130 (274)
...|.|+.||+|+|++. .++|++++.+.. ...++|+|+|||||+|.++.++|||-.+-
T Consensus 25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~------------------- 83 (110)
T 3r0e_B 25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSS------------------- 83 (110)
T ss_dssp SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTTCCEEEECCCCC-------------------
T ss_pred CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCCEEEEcCCcC-------------------
Confidence 37899999999999986 589999986543 35789999999999998889999984310
Q ss_pred cCCCCCCCCcceEEEecCCCceEEEecCCCeEEEecc
Q 040039 131 VSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYAL 167 (274)
Q Consensus 131 ~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg 167 (274)
.. |.|.+.++.+|.+.++. .+.|.++
T Consensus 84 ------~~-~~~~~~L~~dGNlvly~----~~~W~t~ 109 (110)
T 3r0e_B 84 ------KQ-GEYVLILQDDGFGVIYG----PAIFETS 109 (110)
T ss_dssp ------SS-SCCEEEECTTSCEEEEC----SEEEESC
T ss_pred ------CC-CCEEEEEcCCccEEEec----CCEecCC
Confidence 12 67899999999877653 3788876
No 19
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.33 E-value=3.7e-12 Score=97.33 Aligned_cols=70 Identities=29% Similarity=0.540 Sum_probs=57.5
Q ss_pred EEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCCC-ceeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCC
Q 040039 40 VWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSGK-SVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPG 118 (274)
Q Consensus 40 VWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~-~~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpg 118 (274)
+|.+|+..+ ...+.|+|++||+|||+|.++.++|++++... ....|+|+|+|||||++ .++|+| .|.+||
T Consensus 39 ~Wssnt~~~-~~~~~l~l~~dGnLvl~d~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~---~~~W~s-----~t~~~~ 109 (109)
T 3r0e_A 39 NWQSNTANN-GRDCKLTLTDYGELVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG---PSVFKI-----DPWVRG 109 (109)
T ss_dssp TEECCCTTS-CSSCEEEECTTSCEEEECTTSCEEEECCCCCSSSCCEEEEETTTEEEEEC---SEEEEE-----CTTSCC
T ss_pred eEEcCCCCC-CCcEEEEEcCCCeEEEEeCCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe---cCEECC-----CCccCC
Confidence 699998864 23489999999999999988899999987643 34578999999999997 789998 555554
No 20
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.31 E-value=9.5e-12 Score=94.99 Aligned_cols=91 Identities=24% Similarity=0.379 Sum_probs=70.6
Q ss_pred CCCCCCCC-cEEEEecCCcEEEEcCCCCEEEeecCCCCc-eeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCccc
Q 040039 45 RNNPVRIN-ATLELTSDGNLVLQDADGAIAWSTNTSGKS-VVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLL 122 (274)
Q Consensus 45 r~~Pv~~~-~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~-~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~ 122 (274)
..+|+.+. ..|.|+.||||||+++ +|++++.+.. ...++|+++|||||+|.++.++|+|-..
T Consensus 14 ~g~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~~~~vWss~t~------------ 77 (109)
T 3r0e_A 14 TEGHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKSGAQ------------ 77 (109)
T ss_dssp TTCEEEETTEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECCCC------------
T ss_pred CCCEeECCCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCCCCEEEcCCCc------------
Confidence 34455544 7999999999999984 6999986543 3678999999999999888899987311
Q ss_pred CCceEeeecCCCCCCCCcceEEEecCCCceEEEecCCCeEEEecccC
Q 040039 123 EGKKLTASVSTTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALVK 169 (274)
Q Consensus 123 ~~~~L~Sw~s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~~ 169 (274)
... +.|++.++.+|.+.++. .+.|.+++|
T Consensus 78 -------------~~~-~~~~~~L~~dGNlvly~----~~~W~s~t~ 106 (109)
T 3r0e_A 78 -------------SVK-GNYAAVVHPDGRLVVFG----PSVFKIDPW 106 (109)
T ss_dssp -------------CSS-SCCEEEEETTTEEEEEC----SEEEEECTT
T ss_pred -------------CCC-cCEEEEEcCCCeEEEEe----cCEECCCCc
Confidence 013 67899999999877653 578999876
No 21
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=99.23 E-value=8.1e-11 Score=89.20 Aligned_cols=76 Identities=26% Similarity=0.440 Sum_probs=61.7
Q ss_pred cEEEEecCCcEEEEcCCCCEEEeecCCCC--ceeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCceEeee
Q 040039 53 ATLELTSDGNLVLQDADGAIAWSTNTSGK--SVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGKKLTAS 130 (274)
Q Consensus 53 ~~l~~~~~G~L~l~~~~~~~~Wss~~~~~--~~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~~L~Sw 130 (274)
-+|.|+.||||||++. +.+||++++... ....++|+++|||||+|.++.++|+|-.
T Consensus 21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t--------------------- 78 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHS--------------------- 78 (105)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCC---------------------
T ss_pred EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecC---------------------
Confidence 6899999999999984 579999998643 3467899999999999999999999721
Q ss_pred cCCCCCCCCcceEEEecCCCceEEE
Q 040039 131 VSTTNWTDGGLFSLSVTNEGLFAFI 155 (274)
Q Consensus 131 ~s~~dps~~G~ysl~~d~~g~~~~~ 155 (274)
.... +.|.+.|+.+|.+.++
T Consensus 79 ----~~~~-~~~~l~L~ddGNlVly 98 (105)
T 4h3o_A 79 ----TRGS-GNYILILQDDGNVIIY 98 (105)
T ss_dssp ----CCCS-SCEEEEECTTSCEEEE
T ss_pred ----CCCC-CCEEEEEeCCCeEEEE
Confidence 1123 7899999999987665
No 22
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=99.21 E-value=6e-11 Score=104.95 Aligned_cols=70 Identities=27% Similarity=0.556 Sum_probs=60.7
Q ss_pred CcEEEEcCCCCCCCCCcEEEEecCCcEEEEcCCCCEEEeecCCCCceeEEEEeeCCCeeEecCCCceEEeecCC
Q 040039 37 PQVVWSANRNNPVRINATLELTSDGNLVLQDADGAIAWSTNTSGKSVVGLNLTDMGNLVLFDKNNAAVWQSFDH 110 (274)
Q Consensus 37 ~~vVWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~l~d~GNlvl~~~~~~~lWqSFd~ 110 (274)
.+++|.+++..+- ...|.|+.+|+|+++|.++.++|++.+.+.....|+|+++|||||++. .++||||+|
T Consensus 183 ~~~yW~Sgt~~~~--~~~l~l~~dGnLvl~d~~~~~vWsS~t~~~~~~rl~Ld~dGnLvly~~--~~~Wqsf~~ 252 (276)
T 3m7h_A 183 GAATWNAGTQGKG--AVRAVFQGDGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSIAILDE--KPVWARFGF 252 (276)
T ss_dssp SSEEEECCCTTTT--CCEEEECTTSCEEEECTTSCEEEECSCTTCTTCEEEECTTSCEEEEEE--EEEEESSSC
T ss_pred CeEEEECCCCCCc--cEEEEEcCCCeEEEEeCCCcEEEEecCCCCCCEEEEEcCCccEEEEcC--CCeEEccCc
Confidence 5789999998763 278999999999999988889999997655457889999999999975 689999997
No 23
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=99.20 E-value=8.8e-11 Score=101.43 Aligned_cols=88 Identities=23% Similarity=0.307 Sum_probs=70.4
Q ss_pred CcEEEEecCCcEEEEcCCCCEEEeecCCCCceeEEEEeeCCCeeEecCCCceEEeecCCCCCcccCCCcccCCceEeeec
Q 040039 52 NATLELTSDGNLVLQDADGAIAWSTNTSGKSVVGLNLTDMGNLVLFDKNNAAVWQSFDHPTDSLVPGQKLLEGKKLTASV 131 (274)
Q Consensus 52 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~l~d~GNlvl~~~~~~~lWqSFd~PtDTlLpgq~l~~~~~L~Sw~ 131 (274)
.-+|.|+.+|+|+|++. +.+||.+++.....+.++|+++|||||+|.++.++|+|+.+.
T Consensus 27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~~~~~~l~l~~dGnLvl~d~~~~~vW~s~~~~-------------------- 85 (236)
T 1dlp_A 27 SFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSSGTKG-------------------- 85 (236)
T ss_dssp TEEEEECTTSCEEEEES-SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCCCCCC--------------------
T ss_pred CEEEEECCCCcEEEEEC-CEEEEECCCCCCCCeEEEEcCCCcEEEEcCCCcEEEeCCccc--------------------
Confidence 36888999999999985 689999998655556789999999999999899999998641
Q ss_pred CCCCCCCCcceEEEecCCCceEEEecCCCeEEEecccCC
Q 040039 132 STTNWTDGGLFSLSVTNEGLFAFIESNNTSIRYYALVKA 170 (274)
Q Consensus 132 s~~dps~~G~ysl~~d~~g~~~~~~~~~~~~Yw~sg~~~ 170 (274)
.. |.|.+.|+.+|.+.+. . ..+|.+....
T Consensus 86 -----~~-~~~~~~l~d~Gnlvl~--~--~~~W~S~~~p 114 (236)
T 1dlp_A 86 -----SI-GNYVLVLQPDRTVTIY--G--PGLWDSGTSN 114 (236)
T ss_dssp -----CS-SCCEEEECSSSCEEEE--C--SEEEECSCCC
T ss_pred -----cC-CcEEEEEeCCCCEEEe--c--CCEEECCCCC
Confidence 13 6788999888887664 2 2789887553
No 24
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.19 E-value=4e-11 Score=91.78 Aligned_cols=64 Identities=19% Similarity=0.410 Sum_probs=53.0
Q ss_pred EEEcCCCCCCCCCcEEEEecCCcEEEEcCCCC-EEEeecCCC---CceeEEEEeeCCCeeEecCCCceEEee
Q 040039 40 VWSANRNNPVRINATLELTSDGNLVLQDADGA-IAWSTNTSG---KSVVGLNLTDMGNLVLFDKNNAAVWQS 107 (274)
Q Consensus 40 VWvANr~~Pv~~~~~l~~~~~G~L~l~~~~~~-~~Wss~~~~---~~~~~~~l~d~GNlvl~~~~~~~lWqS 107 (274)
||.+|+..+ ...+.|+|+++|||||+|.++. ++|++++.. .....++|+++|||||++ .++|+|
T Consensus 40 vW~snt~~~-~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~---~~~W~s 107 (111)
T 3mez_A 40 GFQSNTHGR-GVDCTLRLNNRGQLEIHSANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG---PAIWST 107 (111)
T ss_dssp CEECCCTTS-CSSCEEEECTTSCEEEECSSCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC---SEEEEC
T ss_pred EEECCcccC-CcCEEEEEcCCCcEEEEeCCCCEEEEEeccccCCCCcCEEEEECCCCeEEEec---cCEEcc
Confidence 999999876 2347999999999999998765 599999632 234678999999999997 789998
No 25
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=92.69 E-value=0.038 Score=32.99 Aligned_cols=27 Identities=26% Similarity=0.630 Sum_probs=21.9
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
++|. ...|-..|.|.. -.|.|++||+|
T Consensus 4 d~C~-~~pC~ngg~C~~~~~~~~C~C~~G~~G 34 (39)
T 1edm_B 4 DQCE-SNPCLNGGSCKDDINSYECWCPFGFEG 34 (39)
T ss_dssp CTTT-TCCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred ccCC-CCCCCCCCEeEcCCCceEeECCCCCcC
Confidence 6786 568999999973 47999999986
No 26
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=90.41 E-value=0.11 Score=33.35 Aligned_cols=28 Identities=25% Similarity=0.548 Sum_probs=21.2
Q ss_pred CCCCCC--cCCCCCCccC--C----CCccCCCCCCC
Q 040039 247 GECGYP--LVCGKYGICS--Q----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y--~~CG~~giC~--~----~~C~Cl~gf~~ 274 (274)
++|... ..|-..|.|. . ..|.|++||+|
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G 39 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSG 39 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCS
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcC
Confidence 567653 4788889996 2 46999999986
No 27
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=88.97 E-value=0.074 Score=33.26 Aligned_cols=27 Identities=26% Similarity=0.600 Sum_probs=19.3
Q ss_pred CCCCC--CcCCCCCCccCC------CCccCCCCCCC
Q 040039 247 GECGY--PLVCGKYGICSQ------GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~--y~~CG~~giC~~------~~C~Cl~gf~~ 274 (274)
++|.. ...|-. |.|.. ..|.|++||+|
T Consensus 4 ~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG 38 (46)
T 1k36_A 4 TKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTG 38 (46)
T ss_dssp ECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSS
T ss_pred ccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCcc
Confidence 45654 256766 88851 46999999987
No 28
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=88.65 E-value=0.2 Score=40.97 Aligned_cols=25 Identities=32% Similarity=0.869 Sum_probs=21.2
Q ss_pred CCCCCcCCCCCCccCC-CCccCCCCCCC
Q 040039 248 ECGYPLVCGKYGICSQ-GQCSCPATYFK 274 (274)
Q Consensus 248 ~C~~y~~CG~~giC~~-~~C~Cl~gf~~ 274 (274)
.|. ..|...|.|.. .+|+|++||+|
T Consensus 150 ~C~--~~C~ngG~Cv~P~~C~C~~Gw~G 175 (188)
T 2ygo_A 150 ECP--GGCRNGGFCNERRICECPDGFHG 175 (188)
T ss_dssp CCT--TCCCTTCEECTTSCEECCTTCBT
T ss_pred ccC--CCCCCCCEeCCCCcccCcCCCCC
Confidence 464 58999999986 68999999987
No 29
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=87.39 E-value=3 Score=35.43 Aligned_cols=62 Identities=21% Similarity=0.175 Sum_probs=37.8
Q ss_pred CcEEEEcCCCC-CCC----CC-cEEEEecC-CcEEEEcCC-CCEEEeecCCC------CceeEEEEeeCCCeeEec
Q 040039 37 PQVVWSANRNN-PVR----IN-ATLELTSD-GNLVLQDAD-GAIAWSTNTSG------KSVVGLNLTDMGNLVLFD 98 (274)
Q Consensus 37 ~~vVWvANr~~-Pv~----~~-~~l~~~~~-G~L~l~~~~-~~~~Wss~~~~------~~~~~~~l~d~GNlvl~~ 98 (274)
-.++|...+.. |.. .. -.+....+ +.++.+|.+ |+++|+-.... .-+..+.++.+||+++.+
T Consensus 155 G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 155 GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 56788877643 321 12 23333333 357777777 88999875321 114567788888888876
No 30
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=86.66 E-value=6.7 Score=33.16 Aligned_cols=63 Identities=11% Similarity=0.173 Sum_probs=39.4
Q ss_pred CCcEEEEcCCCCC-------CCCCcEEEEecCCcEEEEcCCCCEEEeecCCC-CceeEEEEeeCCCeeEec
Q 040039 36 FPQVVWSANRNNP-------VRINATLELTSDGNLVLQDADGAIAWSTNTSG-KSVVGLNLTDMGNLVLFD 98 (274)
Q Consensus 36 ~~~vVWvANr~~P-------v~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~-~~~~~~~l~d~GNlvl~~ 98 (274)
...++|...+..+ +...+.+-++.++.+..+|.+|+.+|.-.... ..+..+..+.+|++++.+
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~ 94 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAW 94 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEE
T ss_pred CCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEe
Confidence 5678999887642 11223333455556666777889999887642 234455667777777654
No 31
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=85.89 E-value=0.23 Score=31.66 Aligned_cols=27 Identities=30% Similarity=0.736 Sum_probs=21.1
Q ss_pred CCCCC--CcCCCCCCccC------CCCccCCCCCCC
Q 040039 247 GECGY--PLVCGKYGICS------QGQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~--y~~CG~~giC~------~~~C~Cl~gf~~ 274 (274)
++|.. .+.|- +|.|. .+.|.|++||+|
T Consensus 10 ~~C~~~~~~yC~-nG~C~~i~~~~~~~C~C~~gy~G 44 (50)
T 2rnl_A 10 NPCNAEFQNFCI-HGECKYIEHLEAVTCKCQQEYFG 44 (50)
T ss_dssp CTTTTTGGGTCS-SSEEEEETTTTEEEEECCSSCCS
T ss_pred cccCchhhCcCC-CCEEEEecCCCCeeEECCCCccc
Confidence 57864 47787 58996 177999999987
No 32
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=85.85 E-value=0.19 Score=30.92 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=16.4
Q ss_pred CCCCCCccC------CCCccCCCCCCC
Q 040039 254 VCGKYGICS------QGQCSCPATYFK 274 (274)
Q Consensus 254 ~CG~~giC~------~~~C~Cl~gf~~ 274 (274)
.|-..|.|. ...|.|++||+|
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G 36 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSG 36 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEET
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcC
Confidence 577778884 146999999986
No 33
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=84.98 E-value=0.22 Score=32.38 Aligned_cols=27 Identities=26% Similarity=0.532 Sum_probs=21.0
Q ss_pred CCCCCCcCCCCCCccC-----C----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICS-----Q----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~-----~----~~C~Cl~gf~~ 274 (274)
++|+ ...|-..|.|. + -.|.|++||+|
T Consensus 9 ~eC~-s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G 44 (55)
T 3u7u_G 9 AEKE-KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTG 44 (55)
T ss_dssp CSTT-TTTSCTTCEEEEECCC--CCCEEEEECTTEES
T ss_pred CCCc-CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcC
Confidence 6674 57899999993 1 46999999986
No 34
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=82.02 E-value=0.39 Score=30.58 Aligned_cols=22 Identities=27% Similarity=0.760 Sum_probs=17.0
Q ss_pred CcCCCCCCccC------CCCccCCCCCCC
Q 040039 252 PLVCGKYGICS------QGQCSCPATYFK 274 (274)
Q Consensus 252 y~~CG~~giC~------~~~C~Cl~gf~~ 274 (274)
.+.|-. |.|. .+.|.|++||+|
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G 40 (50)
T 3e50_C 13 TQFCFH-GTCRFLVQEDKPACVCHSGYVG 40 (50)
T ss_pred cCcccC-CEEeeccCCCCeEEECCCCCcc
Confidence 466774 6885 278999999987
No 35
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=81.58 E-value=0.11 Score=34.63 Aligned_cols=27 Identities=30% Similarity=0.730 Sum_probs=21.3
Q ss_pred CCCCCCCcCCCCC--CccCC----CCccCCCCCC
Q 040039 246 LGECGYPLVCGKY--GICSQ----GQCSCPATYF 273 (274)
Q Consensus 246 ~d~C~~y~~CG~~--giC~~----~~C~Cl~gf~ 273 (274)
.|+|. ...|... |.|.. -.|.|++||+
T Consensus 11 ~d~C~-snPC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 11 PAACS-SNPCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp CCHHH-HCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred CCcCc-CCCCcCCCccccccCCCceEeECCCCCc
Confidence 46785 5779887 89973 4799999997
No 36
>1as5_A Conotoxin Y-PIIIE; neurotoxin, acetylcholine; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.4 PDB: 1jlo_A*
Probab=80.54 E-value=1.1 Score=23.51 Aligned_cols=19 Identities=32% Similarity=0.716 Sum_probs=16.1
Q ss_pred CCCCCcCCCCCCccCCCCc
Q 040039 248 ECGYPLVCGKYGICSQGQC 266 (274)
Q Consensus 248 ~C~~y~~CG~~giC~~~~C 266 (274)
+|-+||.|-+|--|.+..|
T Consensus 3 pcclyg~cr~~pgc~~a~c 21 (26)
T 1as5_A 3 PCCLYGKCRRYPGCSSASC 21 (26)
T ss_dssp CSSSTTCCCCCTTCTTCCC
T ss_pred CceeccccccCCCcchhhh
Confidence 6889999999999976554
No 37
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=79.81 E-value=0.58 Score=32.56 Aligned_cols=27 Identities=30% Similarity=0.779 Sum_probs=21.4
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|.....|. ++.|.. -.|.|++||++
T Consensus 45 deC~~~~~C~-~~~C~n~~g~y~C~C~~G~~g 75 (82)
T 1emn_A 45 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEP 75 (82)
T ss_dssp CGGGTCCTTS-SSCEEECSSSEEECCSSSSCC
T ss_pred ccccCCCCCC-CCEeECCCCCEEeECCCCeEe
Confidence 7787777887 489973 47999999975
No 38
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=79.30 E-value=0.27 Score=31.63 Aligned_cols=23 Identities=26% Similarity=0.650 Sum_probs=17.9
Q ss_pred CcCCCCCCccC--C----CCccCCCCCCC
Q 040039 252 PLVCGKYGICS--Q----GQCSCPATYFK 274 (274)
Q Consensus 252 y~~CG~~giC~--~----~~C~Cl~gf~~ 274 (274)
...|-..|.|. . ..|.|++||+|
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG 39 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIG 39 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEES
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcC
Confidence 35687888895 2 57999999986
No 39
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=79.22 E-value=0.48 Score=37.00 Aligned_cols=27 Identities=26% Similarity=0.709 Sum_probs=20.9
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|. ...|...|.|.. -.|.|++||+|
T Consensus 49 deC~-~~pC~n~g~C~~~~~~y~C~C~~G~~G 79 (146)
T 1x7a_L 49 DQCE-PNPCLNGGLCKDDINSYECWCQVGFEG 79 (146)
T ss_dssp -CCS-SCSSCTTCEEEECSSCEEEECCSSEES
T ss_pred CcCC-CCCCCCCCEeECCCCCEEEecCCCCcC
Confidence 7886 577999999963 46999999975
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=78.51 E-value=0.42 Score=39.42 Aligned_cols=28 Identities=21% Similarity=0.573 Sum_probs=0.0
Q ss_pred CCCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 246 LGECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 246 ~d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
.+.|. ...|...|.|.. -.|.|++||+|
T Consensus 42 ideC~-~~pC~ngg~C~n~~g~y~C~C~~Gf~G 73 (195)
T 1nfu_B 42 GDQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEG 73 (195)
T ss_dssp ---------------------------------
T ss_pred CcccC-CCCCCCCCEeECCCCCeeEeCCCCcee
Confidence 37886 567999999973 57999999975
No 41
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=78.33 E-value=0.67 Score=35.47 Aligned_cols=27 Identities=33% Similarity=0.901 Sum_probs=22.1
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
+.|. ...|...+.|.. ..|.|++||+|
T Consensus 98 ~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G 128 (143)
T 4d90_A 98 NECE-VEPCKNGGICTDLVANYSCECPGEFMG 128 (143)
T ss_dssp CTTT-TCCSCTTCEEEEETTEEEEECCTTCBS
T ss_pred CcCC-CCCCCCCCEeECCCCCeEeECCCCCcc
Confidence 6675 567999999973 47999999986
No 42
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=78.32 E-value=0.78 Score=31.87 Aligned_cols=26 Identities=42% Similarity=0.966 Sum_probs=21.1
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~ 273 (274)
|+|.....|. ++.|.. -.|.|++||+
T Consensus 6 deC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~ 35 (82)
T 1emn_A 6 DECKEPDVCK-HGQCINTDGSYRCECPFGYI 35 (82)
T ss_dssp CSSSSTTSCS-SSEECCCSSCCCEECCTTEE
T ss_pred ccCCCCCCcC-CCEEEecCCCEEEECCCCeE
Confidence 7887767886 599973 5799999996
No 43
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=78.29 E-value=0.39 Score=30.51 Aligned_cols=27 Identities=33% Similarity=0.828 Sum_probs=20.3
Q ss_pred CCCC--CCcCCCCCCccC------CCCccCCCCCCC
Q 040039 247 GECG--YPLVCGKYGICS------QGQCSCPATYFK 274 (274)
Q Consensus 247 d~C~--~y~~CG~~giC~------~~~C~Cl~gf~~ 274 (274)
.+|. ..+.|-. |.|. .+.|.|++||+|
T Consensus 6 ~~C~~~~~~yC~n-G~C~~~~~~~~~~C~C~~gy~G 40 (50)
T 1iox_A 6 SRCPKQYKHYCIK-GRCRFVVAEQTPSCVCDEGYIG 40 (50)
T ss_dssp EECCGGGTTSCTT-CCEEEETTTTEEEECCCTTEET
T ss_pred cccChhhcCcccC-CEEEeEcCCCCeEEECCCCccc
Confidence 4564 3477887 8994 278999999987
No 44
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=78.22 E-value=0.44 Score=31.49 Aligned_cols=28 Identities=21% Similarity=0.383 Sum_probs=20.7
Q ss_pred CCCCCCCcCCCCCCccCC---------CCccCCCCCCC
Q 040039 246 LGECGYPLVCGKYGICSQ---------GQCSCPATYFK 274 (274)
Q Consensus 246 ~d~C~~y~~CG~~giC~~---------~~C~Cl~gf~~ 274 (274)
-++|. ...|-..|.|.. -.|.|++||+|
T Consensus 6 c~~C~-~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G 42 (63)
T 1hae_A 6 CAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTG 42 (63)
T ss_dssp CCHHH-HTTSCTTCEEEEEESSSSSCCEEEECCTTEES
T ss_pred cCCCC-CCcCCCCcEEecCCccCCCCCEEEECCCCCcC
Confidence 35663 567888899951 36999999986
No 45
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.20 E-value=1.1 Score=41.78 Aligned_cols=61 Identities=16% Similarity=0.219 Sum_probs=35.6
Q ss_pred eEEEEEcCCCCeEEEEEc-------CCCCeEEeeecccccCCCCCC--C----------cCCCCCCccCC-CCccCCCCC
Q 040039 213 GQYMRLWPDGHLRVYEWQ-------ASIGWTEVADLLTGYLGECGY--P----------LVCGKYGICSQ-GQCSCPATY 272 (274)
Q Consensus 213 ~~rl~Ld~dG~lr~y~w~-------~~~~W~~~~~~~~~p~d~C~~--y----------~~CG~~giC~~-~~C~Cl~gf 272 (274)
++-+..++||.|-+..+. ...-|.+....-......|.- + ..|. +|.|.. .+|.|++||
T Consensus 338 ~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~~~p~~C~~~~~g~~c~~~~C~~~C~-nG~C~~~~~C~C~~G~ 416 (463)
T 2wg3_C 338 ILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRPLMPEECRATVQPAQTLTSECSRLCR-NGYCTPTGKCCCSPGW 416 (463)
T ss_dssp EEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSCSSCGGGCCCCCCCCCCCCHHHHHCC-SEEECTTSCEEECTTE
T ss_pred ceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccccccccCCCCCcCCCCccccccCCCC-CCccCCCCeECCCCCc
Confidence 556889999999888873 122354431100001123322 1 1366 488974 689999999
Q ss_pred CC
Q 040039 273 FK 274 (274)
Q Consensus 273 ~~ 274 (274)
+|
T Consensus 417 ~G 418 (463)
T 2wg3_C 417 EG 418 (463)
T ss_dssp ES
T ss_pred CC
Confidence 76
No 46
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=76.73 E-value=0.5 Score=36.21 Aligned_cols=27 Identities=22% Similarity=0.648 Sum_probs=0.0
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|.|. ...|...|.|.. ..|.|++||+|
T Consensus 43 d~C~-~~pC~n~g~C~~~~~~y~C~C~~G~~G 73 (134)
T 2vh0_B 43 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEG 73 (134)
T ss_dssp --------------------------------
T ss_pred CcCC-CCCCCCcCCcccCCCCEEeeCCCCccC
Confidence 6786 467999999973 57999999975
No 47
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=75.89 E-value=0.76 Score=32.16 Aligned_cols=27 Identities=26% Similarity=0.591 Sum_probs=20.1
Q ss_pred CCCCC--CcCCCCCCccC------CCCccCCCCCCC
Q 040039 247 GECGY--PLVCGKYGICS------QGQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~--y~~CG~~giC~------~~~C~Cl~gf~~ 274 (274)
++|.. .+.|-. |.|. .+.|.|++||+|
T Consensus 38 ~pC~~~~~~yCln-G~C~~i~~~~~~~C~C~~GYtG 72 (79)
T 1xdt_R 38 DPCLRKYKDFCIH-GECKYVKELRAPSCICHPGYHG 72 (79)
T ss_dssp -CTTTTTTTCCSS-EEECCBGGGTBCCEEECTTEES
T ss_pred CCCCccccCcCCC-CEeeeecCCCCeEEEcCCCccc
Confidence 67863 467876 6894 278999999986
No 48
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=72.03 E-value=0.72 Score=35.65 Aligned_cols=28 Identities=21% Similarity=0.519 Sum_probs=22.7
Q ss_pred CCCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 246 LGECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 246 ~d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
.|.|. ...|...|.|.. -.|.|++||+|
T Consensus 47 id~C~-~~pC~n~g~C~~~~g~y~C~C~~G~~G 78 (142)
T 2c4f_L 47 GDQCA-SSPCQNGGSCKDQLQSYICFCLPAFEG 78 (142)
T ss_dssp CCGGG-GCCCCTTCEEEEETTEEEEECCTTEES
T ss_pred cCcCc-CCCcCCCCEEeCCCCCEEeeCCCCccC
Confidence 36786 578999999973 47999999975
No 49
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=71.49 E-value=0.9 Score=28.51 Aligned_cols=19 Identities=32% Similarity=0.718 Sum_probs=14.7
Q ss_pred cCCCCCCccCC----CCccCCCCCC
Q 040039 253 LVCGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 253 ~~CG~~giC~~----~~C~Cl~gf~ 273 (274)
..|. ..|.+ -.|+|++||.
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~ 42 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYE 42 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCE
T ss_pred CCCC--CEeECCCCCeEEECCCCCe
Confidence 5685 48973 4699999996
No 50
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=70.14 E-value=1.3 Score=31.38 Aligned_cols=27 Identities=30% Similarity=0.645 Sum_probs=21.1
Q ss_pred CCCCCCcCCCCCCccCC------CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ------GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~------~~C~Cl~gf~~ 274 (274)
++|.. ..|...|.|.. ..|.|++||+|
T Consensus 49 ~~C~~-~pC~ngg~C~~~~~~~~~~C~C~~G~~G 81 (91)
T 1tpg_A 49 KSCSE-PRCFNGGTCQQALYFSDFVCQCPEGFAG 81 (91)
T ss_dssp EECSS-CCSCTTCEEEEESSSSCEEEECCTTCBS
T ss_pred CcccC-CCCCCCCEeecCCCCCCeEeECCCCCcC
Confidence 66753 66999999962 36999999986
No 51
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=70.10 E-value=2.6 Score=29.41 Aligned_cols=26 Identities=31% Similarity=0.912 Sum_probs=20.1
Q ss_pred CCCCCC-cCCCCCCccCC----CCccCCCCCC
Q 040039 247 GECGYP-LVCGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 247 d~C~~y-~~CG~~giC~~----~~C~Cl~gf~ 273 (274)
|+|... ..| ..+.|.. -.|.|++||+
T Consensus 4 deC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~ 34 (87)
T 1z6c_A 4 DECSLKPSIC-GTAVCKNIPGDFECECPEGYR 34 (87)
T ss_dssp CSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCE
T ss_pred ccccCCCCCC-CCCEeECCCCCEEEECCCCce
Confidence 678653 458 7899973 5799999996
No 52
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=69.99 E-value=0.78 Score=45.02 Aligned_cols=23 Identities=30% Similarity=0.684 Sum_probs=20.6
Q ss_pred CcCCCCCCccCCCCccCCCCCCC
Q 040039 252 PLVCGKYGICSQGQCSCPATYFK 274 (274)
Q Consensus 252 y~~CG~~giC~~~~C~Cl~gf~~ 274 (274)
+..|+.+|.|...+|.|-+||+|
T Consensus 538 p~~C~ghG~C~~G~C~Cd~G~~G 560 (725)
T 2e26_A 538 LDMCSGHGRCVQGSCVCDEQWGG 560 (725)
T ss_dssp SGGGGGSEEEETTEEEECTTEES
T ss_pred CcccCCCcEECCCCEeeCCCccC
Confidence 35899999999899999999976
No 53
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=69.52 E-value=0.79 Score=33.74 Aligned_cols=29 Identities=10% Similarity=0.253 Sum_probs=23.7
Q ss_pred cCCCCCCCcCCCCCCccCC-----CCccCCCCCCC
Q 040039 245 YLGECGYPLVCGKYGICSQ-----GQCSCPATYFK 274 (274)
Q Consensus 245 p~d~C~~y~~CG~~giC~~-----~~C~Cl~gf~~ 274 (274)
+...| ++..|.+++.|.. ..|.|++||+|
T Consensus 9 ~~h~C-~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~ 42 (105)
T 1n1i_A 9 SAHKC-IDTNVPENAACYRYLDGTEEWRCLLGFKE 42 (105)
T ss_dssp CTTSC-CSSCCCTTEEEEECTTSCEEEEECTTEEE
T ss_pred cCcEe-cCCCCCCCCCeEECCCCCEeEEEECCeec
Confidence 45789 6669999999962 57999999975
No 54
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=67.56 E-value=0.83 Score=29.83 Aligned_cols=21 Identities=19% Similarity=0.561 Sum_probs=16.3
Q ss_pred CCCCCCccC-----C---CCccCCCCCCC
Q 040039 254 VCGKYGICS-----Q---GQCSCPATYFK 274 (274)
Q Consensus 254 ~CG~~giC~-----~---~~C~Cl~gf~~ 274 (274)
.|-..|.|. . ..|.|++||+|
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G 43 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMG 43 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEES
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCcc
Confidence 577778885 1 36999999986
No 55
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=67.47 E-value=0.84 Score=28.93 Aligned_cols=21 Identities=19% Similarity=0.543 Sum_probs=16.3
Q ss_pred CCCCCCccCC--------CCccCCCCCCC
Q 040039 254 VCGKYGICSQ--------GQCSCPATYFK 274 (274)
Q Consensus 254 ~CG~~giC~~--------~~C~Cl~gf~~ 274 (274)
.|-..|.|.. ..|.|++||+|
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G 43 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMG 43 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEES
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcC
Confidence 5777788862 27999999986
No 56
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=64.59 E-value=2.1 Score=31.52 Aligned_cols=21 Identities=24% Similarity=0.656 Sum_probs=16.2
Q ss_pred CCCCCCccCC----CCccCCCCCCC
Q 040039 254 VCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 254 ~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
.|..+|.|.. -.|.|++||+|
T Consensus 21 ~C~~~g~C~~~~~~y~C~C~~G~~G 45 (114)
T 1aut_L 21 LCCGHGTCIDGIGSFSCDCRSGWEG 45 (114)
T ss_dssp TTTTSEEECCCSSCCCEEECTTEES
T ss_pred cCCCcCCCCCCCCCcEeeCCCCCcC
Confidence 4778888863 47999999875
No 57
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=64.46 E-value=4 Score=22.90 Aligned_cols=19 Identities=37% Similarity=0.821 Sum_probs=13.9
Q ss_pred cCCCCCCccCCCCccCCCCC
Q 040039 253 LVCGKYGICSQGQCSCPATY 272 (274)
Q Consensus 253 ~~CG~~giC~~~~C~Cl~gf 272 (274)
|.|-.+.-| ...|+||.|-
T Consensus 8 gscknneqc-qkscscptgc 26 (36)
T 1rju_V 8 GSCKNNEQC-QKSCSCPTGC 26 (36)
T ss_dssp TTTTTCGGG-TTSCCSCTTC
T ss_pred CCccChHHH-hhcCCCCCCC
Confidence 566777777 5779998773
No 58
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=64.44 E-value=1.8 Score=33.01 Aligned_cols=27 Identities=33% Similarity=0.831 Sum_probs=20.8
Q ss_pred CCCCCCcCCCCCCccC-----------CCCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICS-----------QGQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~-----------~~~C~Cl~gf~~ 274 (274)
++|. ...|...+.|. ...|.|++||+|
T Consensus 53 ~~C~-~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G 90 (143)
T 4d90_A 53 GPCT-PNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNG 90 (143)
T ss_dssp CTTS-SCCCCTTCEEEECCCEETTEECCEEEECCTTEES
T ss_pred CcCC-CCCCCCCCEecCCCccccCCCCCeEeECcCCCcC
Confidence 5673 46799999996 247999999975
No 59
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=64.25 E-value=1.4 Score=32.35 Aligned_cols=26 Identities=27% Similarity=0.761 Sum_probs=0.0
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|.....|. +.|.. -.|.|++||.+
T Consensus 70 deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~ 99 (107)
T 2w2n_E 70 DECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 99 (107)
T ss_dssp --------------------------------
T ss_pred cccCCCCCcC--CeeecCCCCEEEECCCCceE
Confidence 6787667786 78973 57999999974
No 60
>1jlp_A PSI-conotoxin PIIIF; multiple disulfide bonds, amidated C-terminus; HET: HYP; NMR {Synthetic} SCOP: j.30.1.4
Probab=64.21 E-value=4.9 Score=20.94 Aligned_cols=19 Identities=21% Similarity=0.529 Sum_probs=15.2
Q ss_pred CCCCCcCCCCCCccCCCCc
Q 040039 248 ECGYPLVCGKYGICSQGQC 266 (274)
Q Consensus 248 ~C~~y~~CG~~giC~~~~C 266 (274)
+|-+||.|-||--|-+.-|
T Consensus 3 pcclygscrpfpgcynalc 21 (26)
T 1jlp_A 3 PCCLYGSCRPFPGCYNALC 21 (26)
T ss_dssp CSCSTTSCCCCTTTTTSST
T ss_pred CceeeccccCCCchhhhhh
Confidence 6889999999998854444
No 61
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=61.14 E-value=1.2 Score=34.09 Aligned_cols=28 Identities=21% Similarity=0.581 Sum_probs=22.3
Q ss_pred CCCCC-CcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGY-PLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~-y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|.. ...|...+.|.. -.|.|++||++
T Consensus 97 deC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g 129 (143)
T 2bou_A 97 DECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKP 129 (143)
T ss_dssp CHHHHTCCCCCTTSEEEECSSCEEEECCSSSCB
T ss_pred cCccCcCCCCCCCCEEECCCCCEEeeCCCCccc
Confidence 66765 478999999973 46999999975
No 62
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=60.91 E-value=1.1 Score=34.98 Aligned_cols=27 Identities=30% Similarity=0.828 Sum_probs=19.8
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
++|. ...|-..|.|.. -+|.|++||.|
T Consensus 120 ~~c~-~~~C~~~g~C~~~~~~~~c~C~~g~~G 150 (162)
T 1g1s_A 120 ASCQ-DMSCSKQGECLETIGNYTCSCYPGFYG 150 (162)
T ss_dssp CCCC-TTGGGGSEEEEECSSSEEEEECTTEES
T ss_pred CCCc-CCCCCCCCEEecCCCCceEeCCCCCcC
Confidence 4454 356777788862 57999999976
No 63
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=59.99 E-value=2.4 Score=32.20 Aligned_cols=27 Identities=33% Similarity=0.773 Sum_probs=21.3
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
+.|. ...|...+.|.. ..|.|++||+|
T Consensus 84 ~~C~-~~~C~~~g~C~~~~g~~~C~C~~G~~G 114 (135)
T 2vj3_A 84 DECA-SSPCLHNGRCLDKINEFQCECPTGFTG 114 (135)
T ss_dssp CTTT-TCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred Cccc-CCCcCCCCEeECCCCCeEEECCCCCcC
Confidence 5675 467999999973 47999999976
No 64
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=59.22 E-value=1.9 Score=40.08 Aligned_cols=21 Identities=29% Similarity=0.925 Sum_probs=0.0
Q ss_pred CCCCCCccCC-CCccCCCCCCC
Q 040039 254 VCGKYGICSQ-GQCSCPATYFK 274 (274)
Q Consensus 254 ~CG~~giC~~-~~C~Cl~gf~~ 274 (274)
.|...|.|.. .+|.|++||+|
T Consensus 429 ~C~~~g~C~~~~~C~C~~G~~G 450 (463)
T 2wg3_C 429 ACRHGGVCVRPNKCLCKKGYLG 450 (463)
T ss_dssp ----------------------
T ss_pred CCCCCCEECCCCEEECCCCccc
Confidence 5666778864 68999999986
No 65
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=59.09 E-value=2.2 Score=33.26 Aligned_cols=26 Identities=27% Similarity=0.777 Sum_probs=20.6
Q ss_pred CCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 248 ECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 248 ~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
.|+. ..|...|.|.. .+|.|.+||.|
T Consensus 121 ~~~~-~~C~~~g~C~~~~~~~~c~C~~g~~g 150 (164)
T 3cfw_A 121 SCQP-WSCSGHGECVEIINNYTCNCDVGYYG 150 (164)
T ss_dssp CCCT-TSSCSSEEEEEETTEEEEEECTTCBS
T ss_pred CCCC-CcCCCCCeecccCCCceeeeCCCccc
Confidence 4544 77898999972 68999999986
No 66
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=58.03 E-value=3.8 Score=36.21 Aligned_cols=22 Identities=27% Similarity=0.783 Sum_probs=15.9
Q ss_pred cCCCCCCccCC-CCccCCCCCCC
Q 040039 253 LVCGKYGICSQ-GQCSCPATYFK 274 (274)
Q Consensus 253 ~~CG~~giC~~-~~C~Cl~gf~~ 274 (274)
..|..+|.|.. ..|.|++||+|
T Consensus 153 ~~C~~~G~C~~~~~C~C~~G~~G 175 (324)
T 2ygq_A 153 GGCRNGGFCNERRICECPDGFHG 175 (324)
T ss_dssp SCCCSSCEECTTSCEECCTTEES
T ss_pred CCCCCCCEECCCCeEECCCCCcC
Confidence 56777788863 56888888765
No 67
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=57.61 E-value=6.3 Score=34.78 Aligned_cols=22 Identities=32% Similarity=0.695 Sum_probs=12.1
Q ss_pred cCCCCCCccCC-CCccCCCCCCC
Q 040039 253 LVCGKYGICSQ-GQCSCPATYFK 274 (274)
Q Consensus 253 ~~CG~~giC~~-~~C~Cl~gf~~ 274 (274)
..|...|.|.. .+|.|++||+|
T Consensus 217 ~~C~~~G~C~~~~~C~C~~G~~G 239 (324)
T 2ygq_A 217 TTCFNGGTCFYPGKCICPPGLEG 239 (324)
T ss_dssp SCCCSSCCBSCSSCBCCCTTCCT
T ss_pred CCCCCCCeeCCCCeeeCCCCccC
Confidence 34555556642 45666666654
No 68
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=57.47 E-value=2.5 Score=29.38 Aligned_cols=26 Identities=38% Similarity=0.933 Sum_probs=19.6
Q ss_pred CCCCC-CcCCCCCCccCC----CCccCCCCCC
Q 040039 247 GECGY-PLVCGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 247 d~C~~-y~~CG~~giC~~----~~C~Cl~gf~ 273 (274)
|+|.. +..|. ++.|.. -.|.|++||+
T Consensus 4 deC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~ 34 (86)
T 1lmj_A 4 DECRISPDLCG-RGQCVNTPGDFECKCDEGYE 34 (86)
T ss_dssp CTTTTCSSTTT-TSCEEEETTEEEECCCSSEE
T ss_pred ccccCCCCCCC-CCEEECCCCCEEeeCCCCcC
Confidence 67865 45695 579973 4799999996
No 69
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=57.15 E-value=1.6 Score=34.68 Aligned_cols=28 Identities=43% Similarity=0.809 Sum_probs=21.7
Q ss_pred CCCCCCcCCCCCCccCC-----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ-----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~-----~~C~Cl~gf~~ 274 (274)
+.|.....|..+|.|.. .+|.|++||+|
T Consensus 132 ~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G 164 (169)
T 2vj2_A 132 NYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSG 164 (169)
T ss_dssp CHHHHTCCCCTTCEEEECSTTCEEEECCTTCCS
T ss_pred CCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcC
Confidence 44554578999999963 47999999986
No 70
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=54.83 E-value=1.6 Score=33.42 Aligned_cols=28 Identities=32% Similarity=0.789 Sum_probs=21.1
Q ss_pred CCCCCC--cCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYP--LVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y--~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|... ..|+.++.|.. ..|.|++||++
T Consensus 45 deC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g 78 (143)
T 2bou_A 45 NECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEP 78 (143)
T ss_dssp CGGGC----CCCTTEEEEECSSCEEEEECTTEEE
T ss_pred ccccCCCCCCCCCCCEEEcCCCCeEeECCCCccc
Confidence 678765 37999999973 46999999964
No 71
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=54.80 E-value=3.2 Score=31.42 Aligned_cols=27 Identities=30% Similarity=0.554 Sum_probs=21.1
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
+.|. ...|...+.|.. ..|.|++||+|
T Consensus 46 ~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G 76 (135)
T 2vj3_A 46 NECV-SNPCQNDATCLDQIGEFQCICMPGYEG 76 (135)
T ss_dssp CTTT-TCCCCSSCEEEECSSCEEEECCTTEES
T ss_pred ccCC-CCCCCCCCEEeCCCCCceeeCCCCCcC
Confidence 5675 367999999973 37999999975
No 72
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=53.57 E-value=7.4 Score=38.12 Aligned_cols=21 Identities=29% Similarity=0.703 Sum_probs=18.5
Q ss_pred CCCCCCccCCCCccCCCCCCC
Q 040039 254 VCGKYGICSQGQCSCPATYFK 274 (274)
Q Consensus 254 ~CG~~giC~~~~C~Cl~gf~~ 274 (274)
.|...|.|...+|.|.+||+|
T Consensus 567 ~Cs~~G~C~~g~C~C~~Gy~G 587 (687)
T 3k6s_B 567 ECSGRGRCRCNVCECHSGYQL 587 (687)
T ss_dssp BTSSSCCBCSSCBCCSTTCCT
T ss_pred CCCCCCcCCCCEEECCCCCcC
Confidence 688889997788999999986
No 73
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=51.76 E-value=1.9 Score=33.21 Aligned_cols=27 Identities=37% Similarity=0.890 Sum_probs=20.8
Q ss_pred CCCCC-CcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGY-PLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~-y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|.. ++.|. ++.|.. -.|.|++||++
T Consensus 108 deC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~g 139 (147)
T 2w86_A 108 DECEVFPGVCK-NGLCVNTRGSFKCQCPSGMTL 139 (147)
T ss_dssp CHHHHSTTCSS-SSEEEEETTEEEEECCTTCCB
T ss_pred ccccCCCCCCC-CCEEECCCCCEEeeCCCCCcc
Confidence 67764 56798 689973 47999999974
No 74
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=51.49 E-value=32 Score=29.57 Aligned_cols=16 Identities=25% Similarity=0.233 Sum_probs=7.7
Q ss_pred CCCeeEec-CCCceEEe
Q 040039 91 MGNLVLFD-KNNAAVWQ 106 (274)
Q Consensus 91 ~GNlvl~~-~~~~~lWq 106 (274)
+|.|+..| .+++++|+
T Consensus 327 ~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp TSEEEEEETTTCCEEEE
T ss_pred CCeEEEEECCCCcEEEE
Confidence 44455444 23455554
No 75
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=50.92 E-value=1.9 Score=34.62 Aligned_cols=28 Identities=32% Similarity=0.892 Sum_probs=22.2
Q ss_pred CCCCC---CcCCCCCCccCC-C--------CccCCCCCCC
Q 040039 247 GECGY---PLVCGKYGICSQ-G--------QCSCPATYFK 274 (274)
Q Consensus 247 d~C~~---y~~CG~~giC~~-~--------~C~Cl~gf~~ 274 (274)
++|.. ...|..++.|.. . .|.|++||+|
T Consensus 45 d~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g 84 (186)
T 1z1y_A 45 NECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTL 84 (186)
T ss_dssp CCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEE
T ss_pred CcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCcc
Confidence 77874 467999999973 3 5999999974
No 76
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=49.84 E-value=8.9 Score=34.45 Aligned_cols=26 Identities=27% Similarity=0.793 Sum_probs=21.0
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|..++.|.. .|.. -.|.|.+||.+
T Consensus 41 deC~~~~~C~~--~C~n~~g~~~C~C~~g~~~ 70 (400)
T 3p5b_L 41 DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQL 70 (400)
T ss_dssp CCCSTTSSCSS--CCBCCSSSCBCCCCTTCCC
T ss_pred hhhhccCCCCC--ccCCCccceeeeccccccc
Confidence 78987788975 8973 57999999974
No 77
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=47.69 E-value=95 Score=26.47 Aligned_cols=72 Identities=18% Similarity=0.378 Sum_probs=43.0
Q ss_pred CCcEEEEcCCC----------CCCCCCcEEEE-ecCCcEEEEcC-CCCEEEeecCCC---------CceeEEEEe-----
Q 040039 36 FPQVVWSANRN----------NPVRINATLEL-TSDGNLVLQDA-DGAIAWSTNTSG---------KSVVGLNLT----- 89 (274)
Q Consensus 36 ~~~vVWvANr~----------~Pv~~~~~l~~-~~~G~L~l~~~-~~~~~Wss~~~~---------~~~~~~~l~----- 89 (274)
...++|...-. .|+-....+.+ +.+|.|+.+|. +|+.+|+..... .........
T Consensus 27 ~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (376)
T 3q7m_A 27 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHV 106 (376)
T ss_dssp CCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEE
T ss_pred cceEEeEEecCCCccccceeeccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEE
Confidence 34588997643 34444445544 44688988887 689999877521 111111112
Q ss_pred ----eCCCeeEecC-CCceEEee
Q 040039 90 ----DMGNLVLFDK-NNAAVWQS 107 (274)
Q Consensus 90 ----d~GNlvl~~~-~~~~lWqS 107 (274)
.+|.|+..|. +++++|+-
T Consensus 107 ~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 107 YIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp EEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEcCCCEEEEEECCCCCEEEEE
Confidence 3455666664 48899975
No 78
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=45.66 E-value=3.7 Score=34.18 Aligned_cols=22 Identities=27% Similarity=0.674 Sum_probs=18.4
Q ss_pred cCCCCCCccCCCCccCCCCCCC
Q 040039 253 LVCGKYGICSQGQCSCPATYFK 274 (274)
Q Consensus 253 ~~CG~~giC~~~~C~Cl~gf~~ 274 (274)
..|..+|.|....|.|.+||+|
T Consensus 96 ~~Csg~G~C~~g~C~C~~G~~G 117 (217)
T 2p28_B 96 SLCHGKGFLECGICRCDTGYIG 117 (217)
T ss_dssp CTTTTSEEEETTEEEECTTEES
T ss_pred CccCCCceEECCEEECCCCccC
Confidence 4688888887788999999976
No 79
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=45.15 E-value=3.6 Score=32.89 Aligned_cols=26 Identities=19% Similarity=0.635 Sum_probs=20.9
Q ss_pred CCCCCCcCC-CCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVC-GKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~C-G~~giC~~----~~C~Cl~gf~~ 274 (274)
++|.. .| ...+.|.. -.|.|++||+|
T Consensus 140 ~~C~~--~C~~~~~~C~n~~g~y~C~C~~G~~g 170 (186)
T 1z1y_A 140 TACQL--XCNTDNEVCXNVEGVYXCQCMEGFTF 170 (186)
T ss_dssp CCCCC--CCCTTTEEEEEETTEEEEEECTTCEE
T ss_pred Ccccc--cccccCcceecCCCCeeeECCCCCcc
Confidence 67873 89 88999973 46999999974
No 80
>1xkp_C Chaperone protein YSCB; YOPN, type III secretion, SYCN, membrane PR chaperon complex; HET: MLY; 1.70A {Yersinia pestis} SCOP: d.198.1.1
Probab=44.83 E-value=32 Score=26.35 Aligned_cols=45 Identities=27% Similarity=0.310 Sum_probs=29.1
Q ss_pred cEEEEecCCc-EEEEcCCCCEEEeecCCC--------------------------CceeEEEEeeCCCeeEe
Q 040039 53 ATLELTSDGN-LVLQDADGAIAWSTNTSG--------------------------KSVVGLNLTDMGNLVLF 97 (274)
Q Consensus 53 ~~l~~~~~G~-L~l~~~~~~~~Wss~~~~--------------------------~~~~~~~l~d~GNlvl~ 97 (274)
++-.|.-||- |.|.-..+..+|+|.-.. ....+++|.|+|||+|.
T Consensus 23 G~Y~l~iD~~~L~l~qq~sellleTpL~~~~~~~~d~~~~~lLK~lmQ~~l~w~R~~p~aLtld~~~qLiLq 94 (143)
T 1xkp_C 23 GVYRLTIDXHLVMLAPHGSELVLRTPIDAPMLREGNNVNVTLLRSLMQQALAWAKRYPQTLVLDDCGQLVLE 94 (143)
T ss_dssp SCEEEEETTEEEEEEEETTEEEEEEECCCGGGEETTEECHHHHHHHHHHHHHHTTTCCCEEEECTTSCEEEE
T ss_pred CceEEEeeeeEEEeeccCCEEEEeccCcchhhcccccccHHHHHHHHHHHHHHHhcCCceEEEcCcccchhh
Confidence 5544555664 445555566899986421 12346899999999996
No 81
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=44.64 E-value=2.7 Score=31.20 Aligned_cols=26 Identities=27% Similarity=0.622 Sum_probs=20.2
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|.....| .+.|.. -.|.|++||++
T Consensus 81 deC~~~~~C--~~~C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 81 DECENGGFC--SGVCHNLPGTFECICGPDSAL 110 (118)
T ss_dssp CHHHHCSSC--SSEEEECSSSEEEEECSSSSC
T ss_pred cccCCCCCC--cCeEEeCCCCEEEECCCCCcc
Confidence 677666778 688962 46999999985
No 82
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=44.48 E-value=7 Score=35.85 Aligned_cols=27 Identities=26% Similarity=0.580 Sum_probs=19.7
Q ss_pred CCCCCcCCCCCCccC--CCCccCCCCCCC
Q 040039 248 ECGYPLVCGKYGICS--QGQCSCPATYFK 274 (274)
Q Consensus 248 ~C~~y~~CG~~giC~--~~~C~Cl~gf~~ 274 (274)
.|.-.+.|...+.|. ..+|.|++||+|
T Consensus 245 ~C~~~~~C~~~g~C~~~~~~C~C~~G~~G 273 (423)
T 2gy5_A 245 RCSGQEGCKSYVFCLPDPYGCSCATGWKG 273 (423)
T ss_dssp ECCSTTTTTTCCEEETTTTEEECCBTCBS
T ss_pred cCCCCCCCCCCCEECCCCCeEEeCCCccc
Confidence 344456777778886 367999999976
No 83
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=44.15 E-value=3.6 Score=34.27 Aligned_cols=21 Identities=38% Similarity=0.985 Sum_probs=18.6
Q ss_pred CCCCC--CccCCCCccCCCCCCC
Q 040039 254 VCGKY--GICSQGQCSCPATYFK 274 (274)
Q Consensus 254 ~CG~~--giC~~~~C~Cl~gf~~ 274 (274)
.|+.+ |.|...+|.|.+||+|
T Consensus 187 ~C~~~~~G~C~~g~C~C~~G~~G 209 (217)
T 2p28_B 187 VCGGPGRGLCFCGKCRCHPGFEG 209 (217)
T ss_dssp ETTCTTTEEEETTEEEECTTEES
T ss_pred CCCCCCCcEEeCCeeECCCCCcc
Confidence 58888 9998789999999986
No 84
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=43.98 E-value=2.5 Score=38.40 Aligned_cols=26 Identities=31% Similarity=0.695 Sum_probs=22.1
Q ss_pred CCCCCCcCCCCCCccCCCCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQGQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~~~C~Cl~gf~~ 274 (274)
..|. +.|+-+|.|...+|.|=+||.|
T Consensus 192 ~~Cp--~~CsGhG~C~~g~C~Cd~G~~g 217 (387)
T 2ddu_A 192 EPCP--SYCSGHGDCISGVCFCDLGYTA 217 (387)
T ss_dssp SCCG--GGGGGSEEEETTEEEECTTEEE
T ss_pred ccCc--cccCCCceecCCeEEecCCccc
Confidence 4675 6899999998899999999864
No 85
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=43.58 E-value=2.6 Score=32.95 Aligned_cols=27 Identities=41% Similarity=0.939 Sum_probs=20.9
Q ss_pred CCCCC-CcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGY-PLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~-y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
|+|.. ++.|. ++.|.. -.|.|++||++
T Consensus 123 deC~~~~~~C~-~g~C~n~~gsy~C~C~~Gy~g 154 (162)
T 1uzk_A 123 DECQELPGLCQ-GGKCINTFGSFQCRCPTGYYL 154 (162)
T ss_dssp CHHHHCGGGGB-TSEEEECSSCEEEECCTTCCB
T ss_pred ccccCCCCCcC-CCEeEcCCCCEEeeCCCCccC
Confidence 77865 56797 589973 47999999975
No 86
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=43.47 E-value=86 Score=23.32 Aligned_cols=12 Identities=25% Similarity=0.290 Sum_probs=9.0
Q ss_pred CCCCCcceEEEec
Q 040039 135 NWTDGGLFSLSVT 147 (274)
Q Consensus 135 dps~~G~ysl~~d 147 (274)
.+.+ |.|+++..
T Consensus 89 ~~~p-G~Ytl~a~ 100 (120)
T 3isy_A 89 VPEP-GTYEVKVT 100 (120)
T ss_dssp CCCS-EEEEEEEE
T ss_pred CCCC-ccEEEEEE
Confidence 4566 99998874
No 87
>1aqs_A Cu-MT, Cu-metallothionein; copper detoxification, metal-thiolate cluster; NMR {Saccharomyces cerevisiae} SCOP: g.46.1.1
Probab=41.54 E-value=15 Score=22.25 Aligned_cols=19 Identities=37% Similarity=0.821 Sum_probs=13.1
Q ss_pred cCCCCCCccCCCCccCCCCC
Q 040039 253 LVCGKYGICSQGQCSCPATY 272 (274)
Q Consensus 253 ~~CG~~giC~~~~C~Cl~gf 272 (274)
|.|-.+.-| ...|+||.|-
T Consensus 12 gscknneqc-qkscscptgc 30 (53)
T 1aqs_A 12 GSCKNNEQC-QKSCSCPTGC 30 (53)
T ss_dssp SSSSSCTTS-TTSCSCCTTC
T ss_pred CCccChHHH-hhcCCCCCCC
Confidence 566667777 4668888763
No 88
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=39.61 E-value=5.4 Score=25.28 Aligned_cols=25 Identities=28% Similarity=0.654 Sum_probs=17.3
Q ss_pred CCCCC-CcCCCCCCccCC----CCccCCCCCC
Q 040039 247 GECGY-PLVCGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 247 d~C~~-y~~CG~~giC~~----~~C~Cl~gf~ 273 (274)
|.|.. .+.|. .+|.+ -.|.|++||.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEE
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCE
Confidence 56765 35575 37863 4699999995
No 89
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=39.58 E-value=6.2 Score=36.34 Aligned_cols=22 Identities=41% Similarity=0.931 Sum_probs=0.0
Q ss_pred cCCCCCCccCC-CCccCCCCCCC
Q 040039 253 LVCGKYGICSQ-GQCSCPATYFK 274 (274)
Q Consensus 253 ~~CG~~giC~~-~~C~Cl~gf~~ 274 (274)
+.|...|.|.. ..|.|+|||+|
T Consensus 371 ~~C~ngg~C~~~~~C~C~~G~~G 393 (426)
T 3zyj_B 371 LHCQNGGTCHNNVRCLCPAAYTG 393 (426)
T ss_dssp -----------------------
T ss_pred ccCCCCCCcCCCCCCcCCCCCcC
Confidence 35666677763 58999999986
No 90
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=39.33 E-value=39 Score=28.01 Aligned_cols=54 Identities=19% Similarity=0.371 Sum_probs=33.9
Q ss_pred cEEEEecCCcEEEEcCCCCEEEeecCCCCceeEEEEeeC---------CCeeEecCCCceEEe
Q 040039 53 ATLELTSDGNLVLQDADGAIAWSTNTSGKSVVGLNLTDM---------GNLVLFDKNNAAVWQ 106 (274)
Q Consensus 53 ~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~l~d~---------GNlvl~~~~~~~lWq 106 (274)
....-+.+|.|..+|.++..+|+..........+.+.++ |.|...|.++..+|+
T Consensus 227 ~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 227 TIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWN 289 (330)
T ss_dssp CEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEE
T ss_pred eEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEE
Confidence 455568788898889999999987654322111223333 345555666677886
No 91
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=39.20 E-value=7 Score=21.38 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=14.0
Q ss_pred CcCCCCCCccCCCCccCCCCCCC
Q 040039 252 PLVCGKYGICSQGQCSCPATYFK 274 (274)
Q Consensus 252 y~~CG~~giC~~~~C~Cl~gf~~ 274 (274)
...|-.-+-| ...|.|++||-|
T Consensus 7 lm~Ck~DsDC-l~~C~C~~G~CG 28 (28)
T 1mct_I 7 WMECTRDSDC-MAKCICVAGHCG 28 (28)
T ss_dssp CCBCSSGGGS-STTCCEETTEEC
T ss_pred hhhccccccc-ccCCEecccccC
Confidence 3445555555 477888888743
No 92
>2juy_A Neopetrosiamide A; amphipathic, antitumor protein; HET: SME; NMR {Neopetrosia SP}
Probab=37.79 E-value=8 Score=20.47 Aligned_cols=15 Identities=33% Similarity=0.992 Sum_probs=11.6
Q ss_pred CCCCCCccCC---CCccC
Q 040039 254 VCGKYGICSQ---GQCSC 268 (274)
Q Consensus 254 ~CG~~giC~~---~~C~C 268 (274)
-|||+--|.. ..|.|
T Consensus 11 dcgpnrpcrdtgf~scdc 28 (28)
T 2juy_A 11 DCGPNRPCRDTGFXSCDC 28 (28)
T ss_dssp TSCTTSCCEEEETTEEEC
T ss_pred ecCCCCcccccCccccCC
Confidence 3899999973 56877
No 93
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=37.74 E-value=8.2 Score=37.43 Aligned_cols=29 Identities=34% Similarity=0.784 Sum_probs=22.1
Q ss_pred CCCCCC-CcCCCCCC---ccCC----CCcc-CCCCCCC
Q 040039 246 LGECGY-PLVCGKYG---ICSQ----GQCS-CPATYFK 274 (274)
Q Consensus 246 ~d~C~~-y~~CG~~g---iC~~----~~C~-Cl~gf~~ 274 (274)
.++|.. ++.|...+ .|.. -+|. |++||+|
T Consensus 44 iDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G 81 (634)
T 1yo8_A 44 LDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRG 81 (634)
T ss_dssp CCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEE
T ss_pred cccccCCCCcccCCccccceeeccCceecccCCCCccc
Confidence 377864 45699999 8973 4699 9999974
No 94
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=37.21 E-value=52 Score=27.20 Aligned_cols=71 Identities=15% Similarity=0.336 Sum_probs=42.2
Q ss_pred cEEEEcC-----CCCCCCC-CcEEEEec-CCcEEEEcCCCCEEEeecCCCCceeEEEEeeC-------CCeeEecCCCce
Q 040039 38 QVVWSAN-----RNNPVRI-NATLELTS-DGNLVLQDADGAIAWSTNTSGKSVVGLNLTDM-------GNLVLFDKNNAA 103 (274)
Q Consensus 38 ~vVWvAN-----r~~Pv~~-~~~l~~~~-~G~L~l~~~~~~~~Wss~~~~~~~~~~~l~d~-------GNlvl~~~~~~~ 103 (274)
..+|... ...|+.+ .+.|-+.. +|.|..+|.++..+|...........+.+..+ |.|+..|.++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~v~t~~l~~~d~~g~~ 206 (330)
T 3hxj_A 127 TEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGSDKVYAINPDGTE 206 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEESSSEEEECTTSCE
T ss_pred CEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEEEEeCEEEEECCCCcE
Confidence 4566532 2366655 35555555 58899999888899987643322222222223 455556766788
Q ss_pred EEeec
Q 040039 104 VWQSF 108 (274)
Q Consensus 104 lWqSF 108 (274)
+|+-.
T Consensus 207 ~~~~~ 211 (330)
T 3hxj_A 207 KWNFY 211 (330)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99854
No 95
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=36.27 E-value=4.1 Score=31.24 Aligned_cols=27 Identities=22% Similarity=0.626 Sum_probs=19.5
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
.+|.. ..|-..|.|.. -.|.|.+||+|
T Consensus 120 ~~~~~-~pc~~~g~C~~~~~~~~c~C~~g~~g 150 (157)
T 1g1t_A 120 AACTN-TSCSGHGECVETINNYTCKCDPGFSG 150 (157)
T ss_dssp CCCCT-TGGGGSEEEEEETTEEEEEECTTEES
T ss_pred CCCCC-CCCCCCCEeecCCCCeeEECCCCccC
Confidence 34543 56777788962 56999999986
No 96
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=35.95 E-value=7.6 Score=37.65 Aligned_cols=29 Identities=28% Similarity=0.605 Sum_probs=22.9
Q ss_pred CCCCCC-CcCCCCCCccCC-C-------CccCCCCCCC
Q 040039 246 LGECGY-PLVCGKYGICSQ-G-------QCSCPATYFK 274 (274)
Q Consensus 246 ~d~C~~-y~~CG~~giC~~-~-------~C~Cl~gf~~ 274 (274)
.++|.. ...|..++.|.. + .|.|++||+|
T Consensus 102 ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G 139 (634)
T 1yo8_A 102 ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG 139 (634)
T ss_dssp CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred cccccCCCcccccCccccccccccccceeeeccCCccc
Confidence 378976 478999999963 3 5999999964
No 97
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=35.90 E-value=19 Score=33.66 Aligned_cols=26 Identities=19% Similarity=0.301 Sum_probs=17.3
Q ss_pred CCCCcCCCCCCccCC--CCccCCCCCCC
Q 040039 249 CGYPLVCGKYGICSQ--GQCSCPATYFK 274 (274)
Q Consensus 249 C~~y~~CG~~giC~~--~~C~Cl~gf~~ 274 (274)
|...+.|...+.|+. .+|.|++||.|
T Consensus 443 C~~~gtc~~~~~Cd~~tg~C~C~~g~~G 470 (525)
T 4aqs_A 443 CNPLGTIPGGNPCDSETGYCYCKRLVTG 470 (525)
T ss_dssp CCTTTBCCSSCCBCTTTCCBCBCTTCCS
T ss_pred CCCCceecCCCcccCCCCEEECCCCCcC
Confidence 444455555666652 67999999876
No 98
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=35.76 E-value=15 Score=33.65 Aligned_cols=26 Identities=19% Similarity=0.639 Sum_probs=19.3
Q ss_pred CCCCcCCCCCCccCC-CCccCCCCCCC
Q 040039 249 CGYPLVCGKYGICSQ-GQCSCPATYFK 274 (274)
Q Consensus 249 C~~y~~CG~~giC~~-~~C~Cl~gf~~ 274 (274)
|+..-.|...|.|+. ..|.|++||+|
T Consensus 289 C~~~C~C~ngg~C~~~~~C~C~~G~~G 315 (423)
T 2gy5_A 289 CKLRCSCNNGEMCDRFQGCLCSPGWQG 315 (423)
T ss_dssp TCCBCCCTTCCEEETTTEEECCTTCBS
T ss_pred ccccccCCCCCEecCCCceECCCCCcC
Confidence 433336888899974 45999999986
No 99
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=35.20 E-value=8.4 Score=37.72 Aligned_cols=23 Identities=26% Similarity=0.632 Sum_probs=18.8
Q ss_pred CcCCCCCCccCCCCccCCCCCCC
Q 040039 252 PLVCGKYGICSQGQCSCPATYFK 274 (274)
Q Consensus 252 y~~CG~~giC~~~~C~Cl~gf~~ 274 (274)
...|..+|.|....|.|.+||+|
T Consensus 434 s~~Cs~~G~C~~g~C~C~~Gy~G 456 (687)
T 3k6s_B 434 RSLCHGKGFLECGICRCDTGYIG 456 (687)
T ss_dssp SSTGGGSEEESSSSEEECSSEES
T ss_pred CCCCCCCCEEeCCEeEcCCCCcC
Confidence 34787788887788999999986
No 100
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=34.56 E-value=11 Score=33.93 Aligned_cols=28 Identities=25% Similarity=0.660 Sum_probs=21.2
Q ss_pred CCCCCCCcCCCCCCccCC----CCccCCC-CCCC
Q 040039 246 LGECGYPLVCGKYGICSQ----GQCSCPA-TYFK 274 (274)
Q Consensus 246 ~d~C~~y~~CG~~giC~~----~~C~Cl~-gf~~ 274 (274)
.+.|. ...|...|.|.. ..|.|++ ||+|
T Consensus 185 ~~~C~-~~pC~n~g~C~~~~~~~~C~C~~~~~~G 217 (410)
T 3asi_A 185 STTCQ-EDSCSNQGVCLQQWDGFSCDCSMTSFSG 217 (410)
T ss_dssp SSCCC-TTSSSTTCEEEECSSSEEEECTTTSEES
T ss_pred CCCcc-cccCCCCCEecCCCCCceEeccCCcccC
Confidence 35674 478999999972 6799995 8864
No 101
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=34.50 E-value=15 Score=36.00 Aligned_cols=28 Identities=29% Similarity=0.611 Sum_probs=13.9
Q ss_pred CCCCCC--cCCCCCCccCCCCccCCCCCCC
Q 040039 247 GECGYP--LVCGKYGICSQGQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y--~~CG~~giC~~~~C~Cl~gf~~ 274 (274)
+.|... ..|..+|.|....|.|.+||+|
T Consensus 526 ~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G 555 (690)
T 3fcs_B 526 FSCVRYKGEMCSGHGQCSCGDCLCDSDWTG 555 (690)
T ss_dssp SCCCBSSSSBGGGSEEEETTEEEECTTEES
T ss_pred CcCcCCCCCCCCCCCEecCCeeECcCCCcC
Confidence 445432 4455555554455555555543
No 102
>2lix_A IMKTX104, potassium channel toxins; disulfide bond stabilized structure; NMR {Lychas mucronatus}
Probab=40.23 E-value=8.6 Score=20.18 Aligned_cols=12 Identities=42% Similarity=1.262 Sum_probs=8.9
Q ss_pred CCccCCCCccCC
Q 040039 258 YGICSQGQCSCP 269 (274)
Q Consensus 258 ~giC~~~~C~Cl 269 (274)
-|.|...+|+|+
T Consensus 16 igtcvdgkckcm 27 (27)
T 2lix_A 16 IGTCVDGKCKCM 27 (27)
Confidence 466777889885
No 103
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=33.75 E-value=5.5 Score=39.11 Aligned_cols=23 Identities=30% Similarity=0.716 Sum_probs=20.0
Q ss_pred CcCCCCCCccCCC-CccCCCCCCC
Q 040039 252 PLVCGKYGICSQG-QCSCPATYFK 274 (274)
Q Consensus 252 y~~CG~~giC~~~-~C~Cl~gf~~ 274 (274)
+..|+-+|.|... +|.|-|||-|
T Consensus 189 ~~~C~g~G~C~~~~~C~C~~g~~g 212 (725)
T 2e26_A 189 EEMCYGHGSCINGTKCICDPGYSG 212 (725)
T ss_dssp GGGGGGSEEEETTTEEEECTTEES
T ss_pred ccccCCCcEecCCCeeeccCCccc
Confidence 5799999999875 9999999854
No 104
>2hjj_A Hypothetical protein YKFF; northeast structural genomics consortium (NESG), PROT structure initiative., PSI-2, structural genomics, unknown; NMR {Escherichia coli} SCOP: d.50.3.3
Probab=33.19 E-value=33 Score=23.94 Aligned_cols=19 Identities=26% Similarity=0.641 Sum_probs=15.3
Q ss_pred CeeEecCCCceEEeecCCC
Q 040039 93 NLVLFDKNNAAVWQSFDHP 111 (274)
Q Consensus 93 Nlvl~~~~~~~lWqSFd~P 111 (274)
-|||++.+|..+|..+.+-
T Consensus 38 RlVVR~~eg~mvWR~wnFE 56 (87)
T 2hjj_A 38 RLVVRDTEGRMVWRAWNFE 56 (87)
T ss_dssp EEEEECSSCCEEEEEESSS
T ss_pred EEEEEcCCCcEEEEeeccC
Confidence 5788888889999987654
No 105
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=33.13 E-value=88 Score=29.79 Aligned_cols=35 Identities=14% Similarity=0.021 Sum_probs=24.2
Q ss_pred cEEEEcCCCCEEEeecCCCC---ceeEEEEeeCCCeeE
Q 040039 62 NLVLQDADGAIAWSTNTSGK---SVVGLNLTDMGNLVL 96 (274)
Q Consensus 62 ~L~l~~~~~~~~Wss~~~~~---~~~~~~l~d~GNlvl 96 (274)
.++.+|..+++||.-...+. -.-.++++++||+.|
T Consensus 227 ~i~elD~~Gkvv~~~~lp~g~~~~HHD~~~l~nGn~Lv 264 (571)
T 3elq_A 227 HWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLL 264 (571)
T ss_dssp EEEEECTTCCEEEEEECCTTEECBCSCEEECTTSCEEE
T ss_pred EEEEECCCCcEEEEEECCCCccccccceEEcCCCcEEE
Confidence 47888999999997654321 123457788888665
No 106
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=32.25 E-value=14 Score=36.07 Aligned_cols=24 Identities=21% Similarity=0.529 Sum_probs=14.8
Q ss_pred CCcCCC-CCCccCCCCccCCCCCCC
Q 040039 251 YPLVCG-KYGICSQGQCSCPATYFK 274 (274)
Q Consensus 251 ~y~~CG-~~giC~~~~C~Cl~gf~~ 274 (274)
..+.|- .+|.|....|.|.+||+|
T Consensus 444 n~~~C~~g~G~~~~G~C~C~~Gy~G 468 (690)
T 3fcs_B 444 NSHRCNNGNGTFECGVCRCGPGWLG 468 (690)
T ss_dssp TCTTTTTTSEEEETTEEEECTTCCS
T ss_pred CCCcccCCCCeEeCCceEeCCCccC
Confidence 334443 344443356999999986
No 107
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=31.86 E-value=20 Score=27.45 Aligned_cols=25 Identities=28% Similarity=0.720 Sum_probs=18.3
Q ss_pred CCCCCC-cCCCCCCcc-CC----CCccCCCCCC
Q 040039 247 GECGYP-LVCGKYGIC-SQ----GQCSCPATYF 273 (274)
Q Consensus 247 d~C~~y-~~CG~~giC-~~----~~C~Cl~gf~ 273 (274)
|.|... +.|.. .| .. -.|.|++||+
T Consensus 86 deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~ 116 (146)
T 1x7a_L 86 ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYR 116 (146)
T ss_dssp CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEE
T ss_pred ccccCCCCCCcC--CCCCCCCCCEEeEcCCCcE
Confidence 567653 56766 89 52 5799999997
No 108
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=30.17 E-value=1.6e+02 Score=27.58 Aligned_cols=70 Identities=19% Similarity=0.412 Sum_probs=43.3
Q ss_pred cEEEEcCC-------CCCCCCCcEEEEec--CCcEEEEcC--CCCEEEeecCCCC--------------cee----EE-E
Q 040039 38 QVVWSANR-------NNPVRINATLELTS--DGNLVLQDA--DGAIAWSTNTSGK--------------SVV----GL-N 87 (274)
Q Consensus 38 ~vVWvANr-------~~Pv~~~~~l~~~~--~G~L~l~~~--~~~~~Wss~~~~~--------------~~~----~~-~ 87 (274)
.++|...- ..|+-...++.+.. +|.|+-+|. +|+.+|+...... +++ .+ .
T Consensus 41 ~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 120 (571)
T 2ad6_A 41 KAAWSFSTGVLNGHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVK 120 (571)
T ss_dssp EEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEE
T ss_pred cEEEEEECCCCCCcccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEE
Confidence 56888643 23544455555554 588988886 7999999764321 111 11 1
Q ss_pred EeeCCCeeEecC-CCceEEee
Q 040039 88 LTDMGNLVLFDK-NNAAVWQS 107 (274)
Q Consensus 88 l~d~GNlvl~~~-~~~~lWqS 107 (274)
-..+|.|+..|. +++++|+-
T Consensus 121 ~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 121 KQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp ECTTSEEEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEECCCCCEEEEe
Confidence 234677777775 68999984
No 109
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=30.13 E-value=16 Score=31.54 Aligned_cols=26 Identities=31% Similarity=0.613 Sum_probs=19.4
Q ss_pred CCCCC--CcCCCCCCccCC----CCccCCCCCCC
Q 040039 247 GECGY--PLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~--y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
++|.. .+.|.. .|.. -.|.|++||.+
T Consensus 44 ~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~ 75 (317)
T 3h5c_B 44 NECHPERTDGCQH--FCLPGQESYTCSCAQGYRL 75 (317)
T ss_dssp SSCCTTCTTSCSS--EEECCSSSCEEECCTTEEC
T ss_pred ccCCCCCCCCCcC--ccccCCCeeEEeccccccc
Confidence 67866 367876 7863 57999999964
No 110
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=29.63 E-value=8.5 Score=25.88 Aligned_cols=16 Identities=31% Similarity=0.517 Sum_probs=10.7
Q ss_pred CCCCC-CcCCCCCCccC
Q 040039 247 GECGY-PLVCGKYGICS 262 (274)
Q Consensus 247 d~C~~-y~~CG~~giC~ 262 (274)
|+|.. ...|...+.|.
T Consensus 4 dEC~~~~~~C~~~~~C~ 20 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCI 20 (71)
T ss_dssp CCTTCCCCSCTTEEEEE
T ss_pred ccccCCCCCCCCCCEeE
Confidence 66764 34687777886
No 111
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=27.95 E-value=63 Score=24.41 Aligned_cols=26 Identities=38% Similarity=0.979 Sum_probs=18.6
Q ss_pred CCCCCCC--cCCCCCCccCC----CCccCCCCCC
Q 040039 246 LGECGYP--LVCGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 246 ~d~C~~y--~~CG~~giC~~----~~C~Cl~gf~ 273 (274)
.++|... ..|+ ..|.. -.|+|.+||+
T Consensus 117 ~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 117 INECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp CCTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred CcccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence 4789875 3576 47862 5799999996
No 112
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=25.51 E-value=2e+02 Score=26.91 Aligned_cols=71 Identities=20% Similarity=0.297 Sum_probs=43.3
Q ss_pred CcEEEEcCCC---------CCCCCCcEEEEecC-CcEEEEcC-CCCEEEeecCCCC------------cee----EE-EE
Q 040039 37 PQVVWSANRN---------NPVRINATLELTSD-GNLVLQDA-DGAIAWSTNTSGK------------SVV----GL-NL 88 (274)
Q Consensus 37 ~~vVWvANr~---------~Pv~~~~~l~~~~~-G~L~l~~~-~~~~~Wss~~~~~------------~~~----~~-~l 88 (274)
-.++|...-. .|+-...++.+... ++|+-+|. +|+.+|+...... +++ .+ .-
T Consensus 44 ~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~ 123 (582)
T 1flg_A 44 LTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFG 123 (582)
T ss_dssp CEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEE
T ss_pred CcEEEEEECCCccCCcceeccEEECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEE
Confidence 4578886533 35444456666554 66887786 7899999865321 111 11 11
Q ss_pred eeCCCeeEecC-CCceEEee
Q 040039 89 TDMGNLVLFDK-NNAAVWQS 107 (274)
Q Consensus 89 ~d~GNlvl~~~-~~~~lWqS 107 (274)
..+|.|+-.|. +++++|+-
T Consensus 124 t~dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 124 TLDASVVALNKNTGKVVWKK 143 (582)
T ss_dssp ETTTEEEEEESSSCCEEEEE
T ss_pred eCCCEEEEEECCCCCEEeee
Confidence 34677777775 68999984
No 113
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=24.87 E-value=1.6e+02 Score=28.05 Aligned_cols=70 Identities=20% Similarity=0.364 Sum_probs=42.9
Q ss_pred cEEEEcCCC-------CCCCCCcEEEEe-cCCcEEEEcC-CCCEEEeecCCCC--------------cee----EE-EEe
Q 040039 38 QVVWSANRN-------NPVRINATLELT-SDGNLVLQDA-DGAIAWSTNTSGK--------------SVV----GL-NLT 89 (274)
Q Consensus 38 ~vVWvANr~-------~Pv~~~~~l~~~-~~G~L~l~~~-~~~~~Wss~~~~~--------------~~~----~~-~l~ 89 (274)
.++|...-. .|+-...+|.+. .+|.|+-+|. +|+.+|+...... +++ .+ .-.
T Consensus 45 ~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 124 (668)
T 1kv9_A 45 GLAWYMDLDNTRGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT 124 (668)
T ss_dssp EEEEEEECSCCSCCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC
T ss_pred ceEEEEECCCCCCcccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc
Confidence 468886532 344344455444 5688888885 7999999864211 111 11 123
Q ss_pred eCCCeeEecC-CCceEEee
Q 040039 90 DMGNLVLFDK-NNAAVWQS 107 (274)
Q Consensus 90 d~GNlvl~~~-~~~~lWqS 107 (274)
.+|.|+-.|. +++++|+-
T Consensus 125 ~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 125 LDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEECCCCCEeeee
Confidence 4677888884 68999985
No 114
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=24.15 E-value=57 Score=25.14 Aligned_cols=26 Identities=35% Similarity=0.759 Sum_probs=18.0
Q ss_pred CCCCCCCcC----CCCCCccCC----CCccCCCCCC
Q 040039 246 LGECGYPLV----CGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 246 ~d~C~~y~~----CG~~giC~~----~~C~Cl~gf~ 273 (274)
.+.|..... |-. .|.. -.|+|.+||+
T Consensus 124 i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 124 IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 477876532 654 5863 4699999996
No 115
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=24.01 E-value=2.7e+02 Score=23.10 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=29.4
Q ss_pred cEEEEecCCcEEEEcCCCCE--EEeecCCC-------------------CceeEEEEee-CCCeeEecC
Q 040039 53 ATLELTSDGNLVLQDADGAI--AWSTNTSG-------------------KSVVGLNLTD-MGNLVLFDK 99 (274)
Q Consensus 53 ~~l~~~~~G~L~l~~~~~~~--~Wss~~~~-------------------~~~~~~~l~d-~GNlvl~~~ 99 (274)
.-+.++.+|+|++.|..... +|..+... .....+.+.. +|+|.+.|.
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence 46888899999888865443 35432210 0123456664 899999985
No 116
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=23.07 E-value=2.1e+02 Score=27.12 Aligned_cols=70 Identities=14% Similarity=0.372 Sum_probs=44.1
Q ss_pred cEEEEcCC-------CCCCCCCcEEEEec--CCcEEEEcC--CCCEEEeecCCCC--------------ceeE-------
Q 040039 38 QVVWSANR-------NNPVRINATLELTS--DGNLVLQDA--DGAIAWSTNTSGK--------------SVVG------- 85 (274)
Q Consensus 38 ~vVWvANr-------~~Pv~~~~~l~~~~--~G~L~l~~~--~~~~~Wss~~~~~--------------~~~~------- 85 (274)
.++|...- ..|+-...+|.+.. +|.|+-+|. +|+.+|+...... +++.
T Consensus 41 ~~~W~~~~g~~~g~~~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~ 120 (599)
T 1w6s_A 41 RPAWTFSTGLLNGHEGAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKT 120 (599)
T ss_dssp EEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSS
T ss_pred cEEEEEECCCCCCceeccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcc
Confidence 47888543 34555555665554 588988886 7999999875321 1111
Q ss_pred ---EEE-eeCCCeeEecC-CCceEEee
Q 040039 86 ---LNL-TDMGNLVLFDK-NNAAVWQS 107 (274)
Q Consensus 86 ---~~l-~d~GNlvl~~~-~~~~lWqS 107 (274)
+.+ ..+|.|+-.|. +++++|+-
T Consensus 121 ~~rV~v~t~dg~l~AlDa~TG~~~W~~ 147 (599)
T 1w6s_A 121 PALILKTQLDGNVAALNAETGETVWKV 147 (599)
T ss_dssp CCEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eeEEEEEcCCCEEEEEECCCCCEEEee
Confidence 112 24577777774 68999984
No 117
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=22.25 E-value=28 Score=25.14 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=22.4
Q ss_pred CCCCCC-cCCCCCCccC--C-------CCccCCCCCCC
Q 040039 247 GECGYP-LVCGKYGICS--Q-------GQCSCPATYFK 274 (274)
Q Consensus 247 d~C~~y-~~CG~~giC~--~-------~~C~Cl~gf~~ 274 (274)
.+|.+- +-|.+++.|. . ..|+|.+||.+
T Consensus 47 ~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~ 84 (99)
T 1ob1_C 47 PTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSY 84 (99)
T ss_dssp CCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCC
T ss_pred CChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcc
Confidence 579875 8999999997 2 35999999863
No 118
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=22.15 E-value=21 Score=31.65 Aligned_cols=25 Identities=36% Similarity=0.691 Sum_probs=13.4
Q ss_pred CCCCCCcCCCCCCccCC----CCccCCCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCPATYF 273 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl~gf~ 273 (274)
++|...+.|.. .|.. -.|.|++||.
T Consensus 45 ~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 45 NECAEEGYCSQ--GCTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp -------CCTT--EEC-----CCEECCTTEE
T ss_pred ceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence 67876677864 3863 5899999985
No 119
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=22.12 E-value=1.8e+02 Score=27.86 Aligned_cols=71 Identities=21% Similarity=0.386 Sum_probs=43.5
Q ss_pred CcEEEEcCCC-------CCCCCCcEEEEe-cCCcEEEEcC-CCCEEEeecCCCC--------------cee----EEEE-
Q 040039 37 PQVVWSANRN-------NPVRINATLELT-SDGNLVLQDA-DGAIAWSTNTSGK--------------SVV----GLNL- 88 (274)
Q Consensus 37 ~~vVWvANr~-------~Pv~~~~~l~~~-~~G~L~l~~~-~~~~~Wss~~~~~--------------~~~----~~~l- 88 (274)
..++|...-. .|+-..++|.+. .+|.|+-+|. +|+.+|+...... +++ .+.+
T Consensus 55 ~~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~ 134 (677)
T 1kb0_A 55 LGLAWSYNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVG 134 (677)
T ss_dssp EEEEEEEECCCCSCCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEE
T ss_pred ccEEEEEECCCCCCceeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEE
Confidence 3578886532 344444555544 4588888885 6899999865321 111 1111
Q ss_pred eeCCCeeEecC-CCceEEee
Q 040039 89 TDMGNLVLFDK-NNAAVWQS 107 (274)
Q Consensus 89 ~d~GNlvl~~~-~~~~lWqS 107 (274)
..+|.|+..|. +++++|+-
T Consensus 135 ~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 135 AWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp CTTSEEEEEETTTCCEEEEE
T ss_pred cCCCEEEEEECCCCCEEeee
Confidence 34677887885 68999985
No 120
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=21.91 E-value=2.2e+02 Score=23.73 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=23.4
Q ss_pred CCcEEEEcCC-CCEEEeecCCC-CceeEEEEeeCCCeeEecCCCc
Q 040039 60 DGNLVLQDAD-GAIAWSTNTSG-KSVVGLNLTDMGNLVLFDKNNA 102 (274)
Q Consensus 60 ~G~L~l~~~~-~~~~Wss~~~~-~~~~~~~l~d~GNlvl~~~~~~ 102 (274)
+|.+++.|.. +.++-...... .....+.+..+|+|++.|..+.
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~ 112 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALH 112 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTT
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCC
Confidence 3456666553 44432222111 2344567778999888876543
No 121
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=21.72 E-value=1.9e+02 Score=27.64 Aligned_cols=70 Identities=19% Similarity=0.387 Sum_probs=42.8
Q ss_pred cEEEEcCCC-------CCCCCCcEEEE-ecCCcEEEEcC-CCCEEEeecCCCC--------------cee----EEEE-e
Q 040039 38 QVVWSANRN-------NPVRINATLEL-TSDGNLVLQDA-DGAIAWSTNTSGK--------------SVV----GLNL-T 89 (274)
Q Consensus 38 ~vVWvANr~-------~Pv~~~~~l~~-~~~G~L~l~~~-~~~~~Wss~~~~~--------------~~~----~~~l-~ 89 (274)
.++|...-. .|+-...+|.+ +.+|.|+-+|. +|+.+|+...... +++ .+.+ .
T Consensus 49 ~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~ 128 (689)
T 1yiq_A 49 GLAWSYKLDLDRGVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV 128 (689)
T ss_dssp EEEEEEECSSCSCCCCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC
T ss_pred eEEEEEECCCCCCceecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc
Confidence 468886533 34434445544 45688988885 7999999764211 111 1111 2
Q ss_pred eCCCeeEecC-CCceEEee
Q 040039 90 DMGNLVLFDK-NNAAVWQS 107 (274)
Q Consensus 90 d~GNlvl~~~-~~~~lWqS 107 (274)
.+|.|+..|. +|+++|+-
T Consensus 129 ~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 129 LDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTSEEEEEETTTCCEEEEE
T ss_pred cCCEEEEEECCCCCEeeee
Confidence 4677777775 58999984
No 122
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.45 E-value=2.4e+02 Score=24.78 Aligned_cols=52 Identities=15% Similarity=0.253 Sum_probs=0.0
Q ss_pred EEEecCCcEEEEcC-CCCEEEeec-CCC------------------------CceeEEEEeeCCCeeEecCCCceEEe
Q 040039 55 LELTSDGNLVLQDA-DGAIAWSTN-TSG------------------------KSVVGLNLTDMGNLVLFDKNNAAVWQ 106 (274)
Q Consensus 55 l~~~~~G~L~l~~~-~~~~~Wss~-~~~------------------------~~~~~~~l~d~GNlvl~~~~~~~lWq 106 (274)
+.++.+|+|++.|. .+..|..-. ..+ .....+.+..+|+|.+.|..+..|..
T Consensus 328 ia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 328 MTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp EEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred EEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
No 123
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=21.39 E-value=29 Score=36.24 Aligned_cols=27 Identities=26% Similarity=0.726 Sum_probs=20.6
Q ss_pred CCCCCCcCCCCCCccCC----CCccCC-CCCCC
Q 040039 247 GECGYPLVCGKYGICSQ----GQCSCP-ATYFK 274 (274)
Q Consensus 247 d~C~~y~~CG~~giC~~----~~C~Cl-~gf~~ 274 (274)
+.|. ...|...|.|.. ..|.|+ +||+|
T Consensus 1018 ~~C~-~~pC~ngG~C~~~~~~~~C~C~~~g~~G 1049 (1245)
T 3qcw_A 1018 TTCQ-EDSCSNQGVCLQQWDGFSCDCSMTSFSG 1049 (1245)
T ss_dssp CCCC-TTSSSSSCEEEEETTEEEEECTTSSCBS
T ss_pred CceE-CCcCCCCCEeCCCCCCCEEECCCCCCCC
Confidence 4564 467999999972 679999 69986
No 124
>3u1j_A Serine protease subunit NS2B; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} PDB: 3u1i_A
Probab=21.20 E-value=69 Score=20.11 Aligned_cols=38 Identities=18% Similarity=0.470 Sum_probs=22.5
Q ss_pred cEEEEcCCCCEEEeecCC--CCce-eEEEEeeCCCeeEecCC
Q 040039 62 NLVLQDADGAIAWSTNTS--GKSV-VGLNLTDMGNLVLFDKN 100 (274)
Q Consensus 62 ~L~l~~~~~~~~Wss~~~--~~~~-~~~~l~d~GNlvl~~~~ 100 (274)
.|++-- .+.+-|+-... +.++ -..++.++|||.|.+..
T Consensus 6 dL~~E~-ag~v~W~~eAe~sG~s~rldV~~d~~G~f~l~~~~ 46 (51)
T 3u1j_A 6 DLTVEK-AADVTWEEEAEQTGVSHNLMITVDDDGTMRIKDDE 46 (51)
T ss_pred cEEEEE-EeccccCcchhhcCCcceEEEEECCCCCeEeccCC
Confidence 355543 34567876542 2222 24578889999987644
No 125
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=21.13 E-value=22 Score=21.96 Aligned_cols=10 Identities=40% Similarity=0.989 Sum_probs=8.6
Q ss_pred CCccCCCCCC
Q 040039 264 GQCSCPATYF 273 (274)
Q Consensus 264 ~~C~Cl~gf~ 273 (274)
..|.|++||.
T Consensus 19 ~~C~C~~Gy~ 28 (51)
T 1kig_L 19 VRCSCAHGYV 28 (51)
T ss_dssp ECCCCCTTEE
T ss_pred eEEeCCCCcE
Confidence 5799999985
No 126
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=21.04 E-value=3.1e+02 Score=21.67 Aligned_cols=54 Identities=17% Similarity=0.414 Sum_probs=30.9
Q ss_pred cEEEEecCCcEEEEcCCCCE-EEeecCC---------CCceeEEEEeeCCCeeEecCCCc-eEEe
Q 040039 53 ATLELTSDGNLVLQDADGAI-AWSTNTS---------GKSVVGLNLTDMGNLVLFDKNNA-AVWQ 106 (274)
Q Consensus 53 ~~l~~~~~G~L~l~~~~~~~-~Wss~~~---------~~~~~~~~l~d~GNlvl~~~~~~-~lWq 106 (274)
..+.+..+|.|+....++.+ +|..... ...+..+....+|.|+.-..++. .+|+
T Consensus 229 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 229 YCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFS 293 (313)
T ss_dssp EEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred EEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEe
Confidence 35667777765554444443 5654321 12345566777888776666655 4676
No 127
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=20.67 E-value=8.3 Score=33.19 Aligned_cols=26 Identities=8% Similarity=-0.086 Sum_probs=20.4
Q ss_pred CCCCcCCCCCCccCC----CCccCCCCCCC
Q 040039 249 CGYPLVCGKYGICSQ----GQCSCPATYFK 274 (274)
Q Consensus 249 C~~y~~CG~~giC~~----~~C~Cl~gf~~ 274 (274)
+.....|...|.|.. -+|.||+||+|
T Consensus 168 ~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G 197 (267)
T 4fbr_A 168 INVDAKSNDGGKTLSGTMTYNGEGPIGFRG 197 (267)
T ss_dssp EEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred ccCCCCCCCCCEeeCCCCCeEEeCCCCccc
Confidence 334567999999973 57999999975
No 128
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=20.58 E-value=48 Score=18.19 Aligned_cols=9 Identities=33% Similarity=1.058 Sum_probs=4.6
Q ss_pred CCccCCC-CC
Q 040039 264 GQCSCPA-TY 272 (274)
Q Consensus 264 ~~C~Cl~-gf 272 (274)
..|.|++ ||
T Consensus 18 ~~C~C~~~G~ 27 (29)
T 1lu0_A 18 AECVCLEHGY 27 (29)
T ss_dssp TTCCBCTTSB
T ss_pred CCCEEccccc
Confidence 4555554 44
Done!