Query 040042
Match_columns 363
No_of_seqs 144 out of 729
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 06:44:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m00_A Aristolochene synthase; 100.0 1E-116 5E-121 912.8 33.4 336 22-363 12-369 (550)
2 3g4d_A (+)-delta-cadinene synt 100.0 2E-116 7E-121 912.4 33.3 339 20-363 15-373 (554)
3 3n0f_A Isoprene synthase; terp 100.0 2E-116 8E-121 912.5 29.6 335 25-363 13-371 (555)
4 2ong_A 4S-limonene synthase; m 100.0 4E-111 1E-115 873.6 32.9 334 26-363 1-362 (543)
5 2j5c_A 1,8-cineole synthase; t 100.0 8E-111 3E-115 874.8 27.5 339 19-363 27-389 (569)
6 1n1b_A (+)-bornyl diphosphate 100.0 3E-110 1E-114 867.1 30.0 336 24-363 3-368 (549)
7 3s9v_A Abietadiene synthase, c 100.0 9E-103 3E-107 837.5 33.4 316 45-363 245-604 (785)
8 3sdr_A Alpha-bisabolene syntha 100.0 6E-103 2E-107 841.7 31.7 316 45-363 273-632 (817)
9 3p5p_A Taxadiene synthase; cla 100.0 5E-102 2E-106 830.2 33.9 314 45-363 221-573 (764)
10 3pya_A ENT-copalyl diphosphate 100.0 2E-100 6E-105 812.6 30.4 314 45-363 220-591 (727)
11 1di1_A Aristolochene synthase; 99.8 2.4E-21 8.1E-26 183.8 7.6 111 235-349 13-125 (300)
12 3bny_A Aristolochene synthase; 99.8 3.3E-21 1.1E-25 184.9 8.0 115 231-349 23-139 (320)
13 1ps1_A Pentalenene synthase; a 99.8 1.4E-21 4.8E-26 188.8 0.9 114 233-350 15-132 (337)
14 3kb9_A EPI-isozizaene synthase 99.4 1.9E-14 6.5E-19 142.7 1.8 108 242-351 65-176 (382)
15 3sdr_A Alpha-bisabolene syntha 87.8 0.2 7E-06 54.3 2.4 36 25-60 23-68 (817)
16 3v1v_A 2-MIB synthase, 2-methy 70.4 6.8 0.00023 39.2 6.5 112 242-355 134-258 (433)
17 1c07_A Protein (epidermal grow 43.8 1E+02 0.0034 23.1 7.7 60 65-128 24-85 (95)
18 1qjt_A EH1, epidermal growth f 35.1 1.1E+02 0.0037 23.4 6.7 63 66-133 26-88 (99)
19 1pd3_A Nonstructural protein N 33.6 29 0.00099 25.0 2.7 33 46-80 16-48 (58)
20 1fi6_A EH domain protein REPS1 29.0 69 0.0024 23.8 4.5 71 53-128 9-83 (92)
21 1yyq_A Trichodiene synthase; t 26.7 41 0.0014 32.9 3.5 54 261-317 64-118 (374)
No 1
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=1.5e-116 Score=912.78 Aligned_cols=336 Identities=35% Similarity=0.601 Sum_probs=317.6
Q ss_pred ccCCCCCCCCCCC-----Cccccc-----hHHHHHHHHHHHHHHHHHHhhcccCCccchhhHHHHHHhhCCccchHHHHH
Q 040042 22 ISLGLPRSCHFTP-----FQVQCL-----GKSYAKRIEELKADVRAMLDKAVVMDPLHQFELRDALQRLGVSYHFGDEIK 91 (363)
Q Consensus 22 ~~~~~r~~a~~~p-----~f~~~~-----~~~~~~~~~~Lk~~Vk~~l~~~~~~d~~~~L~lID~LqRLGI~~hFe~EI~ 91 (363)
..++.||+||||| +|++++ .+.+.+++++||++||+||.++. .+++++|+|||+||||||+|||++||+
T Consensus 12 ~~~~~R~~~~~~ps~W~d~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~~~-~~~~~~L~lID~lqrLGi~~hF~~EI~ 90 (550)
T 3m00_A 12 EEEIVRPVADFSPSLWGDQFLSFSIKNQVAEKYAKEIEALKEQTRNMLLATG-MKLADTLNLIDTIERLGISYHFEKEID 90 (550)
T ss_dssp ----CCCCCCCCCCTTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHTCSS-CCHHHHHHHHHHHHHTTCGGGCHHHHH
T ss_pred ccccCCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHhcc-cCHHHHHHHHHHHHHcCchhhhHHHHH
Confidence 4556899999999 788873 45688999999999999997532 689999999999999999999999999
Q ss_pred HHHHHHHhhCcccCCCChhHHHHHHHhhhhcCCccccccccccccc-----------cchHHHHHHHHhhcCCCCCchHH
Q 040042 92 KLRNAIYRNNNLQKQESLYDVALEFRLLRQHGYDTATTASIQLKFF-----------DDWKGILSMYEAAYLLVEGENIF 160 (363)
Q Consensus 92 ~~L~~iy~~~~~~~~~DL~~~AL~FRLLR~hGy~VSs~~DvF~~F~-----------~dv~glLsLYeAS~l~~~gE~iL 160 (363)
++|+++|++|.. ..||++|||+|||||||||+||| |||++|+ +|++||||||||||+++|||+||
T Consensus 91 ~~L~~i~~~~~~--~~dl~~~al~FRLLR~hGy~VS~--dvf~~F~~~~G~F~~~l~~d~~glL~LYeAs~l~~~gE~iL 166 (550)
T 3m00_A 91 DILDQIYNQNSN--CNDLCTSALQFRLLRQHGFNISP--EIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDIL 166 (550)
T ss_dssp HHHHHHHHHCCC--CSSHHHHHHHHHHHHHTTCCCCG--GGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCGGG
T ss_pred HHHHHHHHhccc--CCCHHHHHHHHHHHHhcCCCCCh--HHhhhccccCCCccccchhchHHHHHHHHHHhcCCCCcHHH
Confidence 999999998762 47999999999999999999999 9999997 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHhccCcccccchhhHHHHHHH-HhcCCCCCcHHHHHHHHhhhHHHHHhhHHH
Q 040042 161 YEIRNFTTTYLKEYIKHNKDPYILTLVNHALELPLHWRMQRMETRWFID-AYESGPDINHVLLELAKLDFNMVQAKHQED 239 (363)
Q Consensus 161 deA~~Ft~~~L~~~~~~~~~~~L~~~V~~aL~~P~~~~l~Rlear~yI~-~Y~~~~~~n~~lLelAKlDFn~~Q~~hq~E 239 (363)
|+|+.||++||++.+ +..+++|+++|+|||++|||+++||+|||+||+ .|++++++|++||||||+|||+||++||+|
T Consensus 167 deA~~fs~~~L~~~~-~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~E 245 (550)
T 3m00_A 167 EDALAFSTIHLESAA-PHLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQE 245 (550)
T ss_dssp TTHHHHHHHHHHHHG-GGCCTTHHHHHHHHHHSCSTTSCHHHHHHHHHHHTGGGCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-hccCccHHHHHHHHhCCCccCCchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999999988 457888999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhhhc
Q 040042 240 LESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVERW 319 (363)
Q Consensus 240 L~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~aveRW 319 (363)
|++++|||+++|++.+|||||||+||||||++|++||||||.+|++|||+++|+|++||+||+|||+|||++||+||+||
T Consensus 246 L~~l~rWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygTleEl~~ft~ai~RW 325 (550)
T 3m00_A 246 LAQVSRWWKDLDFVTTLPYARDRVVECYFWTLGVYFEPQYSQARVMLVKTISMISIVDDTFDAYGTVKELEAYTDAIQRW 325 (550)
T ss_dssp HHHHHHHHHTTTHHHHSTTSCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCccccCcHHHhHHHHHHHHHHhhCCccchHHHHHHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHhc
Confidence 99999999999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 320 DVSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 320 D~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
|++++++||+|||+||.+|+|++||+++++.++||+++++|+++
T Consensus 326 D~~~~~~LPeymK~~f~al~~~~~E~~~~~~~~~~~~~~~ylk~ 369 (550)
T 3m00_A 326 DINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIE 369 (550)
T ss_dssp CGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHH
T ss_pred CccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHH
Confidence 99999999999999999999999999999999888899999874
No 2
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=2.1e-116 Score=912.37 Aligned_cols=339 Identities=35% Similarity=0.638 Sum_probs=312.6
Q ss_pred ccccCCCCCCCCCCC-----Cccccc----hHHHHHHHHHHHHHHHHHHhhcccCCccchhhHHHHHHhhCCccchHHHH
Q 040042 20 NQISLGLPRSCHFTP-----FQVQCL----GKSYAKRIEELKADVRAMLDKAVVMDPLHQFELRDALQRLGVSYHFGDEI 90 (363)
Q Consensus 20 ~~~~~~~r~~a~~~p-----~f~~~~----~~~~~~~~~~Lk~~Vk~~l~~~~~~d~~~~L~lID~LqRLGI~~hFe~EI 90 (363)
.+..++.||+||||| +|++++ .+.+.+++++||++||+||.++. .|++++|+|||+||||||+|||++||
T Consensus 15 ~~~~~~~R~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~e~Lk~eVr~~l~~~~-~~~~~~l~lID~lqrLGi~~hF~~EI 93 (554)
T 3g4d_A 15 SSNKDEMRPKADFQPSIWGDLFLNCPDKNIDAETEKRHQQLKEEVRKMIVAPM-ANSTQKLAFIDSVQRLGVSYHFTKEI 93 (554)
T ss_dssp ----------CCCCCCTTTTTTTSCCC---CHHHHHHHHHHHHHHHHHHHSCC-SSHHHHHHHHHHHHHTTCGGGCHHHH
T ss_pred hccCCCCCCCCCCCccccccccccCCCchhhHHHHHHHHHHHHHHHHHHHhcc-cCHHHHHHHHHHHHHcCchhhhHHHH
Confidence 344556899999999 788863 46788999999999999997532 68999999999999999999999999
Q ss_pred HHHHHHHHhhCcccCCCChhHHHHHHHhhhhcCCccccccccccccc-----------cchHHHHHHHHhhcCCCCCchH
Q 040042 91 KKLRNAIYRNNNLQKQESLYDVALEFRLLRQHGYDTATTASIQLKFF-----------DDWKGILSMYEAAYLLVEGENI 159 (363)
Q Consensus 91 ~~~L~~iy~~~~~~~~~DL~~~AL~FRLLR~hGy~VSs~~DvF~~F~-----------~dv~glLsLYeAS~l~~~gE~i 159 (363)
+++|+++|++.. ....||++|||+|||||||||+||| |||++|+ +||+||||||||||+++|||+|
T Consensus 94 ~~~L~~i~~~~~-~~~~dl~~~al~FRlLR~hGy~VS~--dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs~l~~~gE~i 170 (554)
T 3g4d_A 94 EDELENIYHNNN-DAENDLYTTSIRFRLLREHGYNVSC--DVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDI 170 (554)
T ss_dssp HHHHHHHHHSCC-CTTCCHHHHHHHHHHHHHTTCCCCG--GGGGGGBCTTSSBCHHHHHCHHHHHHHHHHHTTCCTTCHH
T ss_pred HHHHHHHHhccC-CCCCCHHHHHHHHHHHHhcCCCCCh--hHHhhhcccCCCcccccccchHHHHHHHHHHhCCCCCcHH
Confidence 999999998621 1236999999999999999999999 9999998 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCCCcHHHHHHHHhhhHHHHHhhHHH
Q 040042 160 FYEIRNFTTTYLKEYIKHNKDPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPDINHVLLELAKLDFNMVQAKHQED 239 (363)
Q Consensus 160 LdeA~~Ft~~~L~~~~~~~~~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFn~~Q~~hq~E 239 (363)
||||+.||++||++.+ +.++++|+++|+|||++|||+++||+|||+||+.|++++++|++||||||+|||+||++||+|
T Consensus 171 LdeA~~fs~~~L~~~~-~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~E 249 (554)
T 3g4d_A 171 LDEAISFTTHHLSLAV-ASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHRKE 249 (554)
T ss_dssp HHHHHHHHHHHHHHHS-TTCCTTHHHHHHHHHHCCTTTSCHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hccCchHHHHHHHHhCCCccCCchHHHHHHHHHHhCcCccccHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999988 467888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhhhc
Q 040042 240 LESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVERW 319 (363)
Q Consensus 240 L~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~aveRW 319 (363)
|++++|||+++||+.+|||||||+||||||++|++||||||.+|++|||+++|+|++||+||+|||+|||++||+||+||
T Consensus 250 l~~l~rWwk~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygTleEl~~ft~ai~RW 329 (554)
T 3g4d_A 250 LSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERW 329 (554)
T ss_dssp HHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCcccCCchHHHHHHHHHHHHHhhCCccccHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 320 DVSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 320 D~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
|++++++||+|||+||.+|+|++||+++++.++||.++++|+++
T Consensus 330 D~~~~~~LPeymK~~f~al~~~~~e~~~~~~~~~~~~~~~ylk~ 373 (554)
T 3g4d_A 330 DIKCIDEIPEYMKPSYKALLDVYEEMVQLVAEHGRQYRVEYAKN 373 (554)
T ss_dssp CGGGGGGSCGGGHHHHHHHHHHHHHHHHHHGGGTCTHHHHHHHH
T ss_pred CccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHH
Confidence 99999999999999999999999999999999888899999874
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=2.4e-116 Score=912.49 Aligned_cols=335 Identities=44% Similarity=0.706 Sum_probs=313.6
Q ss_pred CCCCCCCCCC-----Cccccc-----hHHHHHHHHHHHHHHHHHHhhcccC-CccchhhHHHHHHhhCCccchHHHHHHH
Q 040042 25 GLPRSCHFTP-----FQVQCL-----GKSYAKRIEELKADVRAMLDKAVVM-DPLHQFELRDALQRLGVSYHFGDEIKKL 93 (363)
Q Consensus 25 ~~r~~a~~~p-----~f~~~~-----~~~~~~~~~~Lk~~Vk~~l~~~~~~-d~~~~L~lID~LqRLGI~~hFe~EI~~~ 93 (363)
..||+||||| +|++++ .+.+.+++++||++||+||.+. . +++++|+|||+||||||+|||++||+++
T Consensus 13 ~~~~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~~--~~~~~~~L~lID~lqRLGi~~hF~~EI~~~ 90 (555)
T 3n0f_A 13 EARRSADYEPNSWDYDFLLSSDTDESIEVYKDKAKKLEAEVRREINNE--KAEFLTLLELIDNVQRLGLGYRFESDIRRA 90 (555)
T ss_dssp ----CCCCCCCTTCHHHHTCC-----CHHHHHHHHHHHHHHHHHHHCT--TSCHHHHHHHHHHHHHTTCGGGSHHHHHHH
T ss_pred ccCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHhc--ccCHHHHHHHHHHHHHcCchhhhHHHHHHH
Confidence 4699999999 688873 4678899999999999999765 6 8999999999999999999999999999
Q ss_pred HHHHHhhCc--ccCCCChhHHHHHHHhhhhcCCccccccccccccc-----------cchHHHHHHHHhhcCCCCCchHH
Q 040042 94 RNAIYRNNN--LQKQESLYDVALEFRLLRQHGYDTATTASIQLKFF-----------DDWKGILSMYEAAYLLVEGENIF 160 (363)
Q Consensus 94 L~~iy~~~~--~~~~~DL~~~AL~FRLLR~hGy~VSs~~DvF~~F~-----------~dv~glLsLYeAS~l~~~gE~iL 160 (363)
|++||+... .....||++|||+|||||||||+||| |||++|+ +||+||||||||||+++|||+||
T Consensus 91 L~~i~~~~~~~~~~~~DL~~~Al~FRLLR~hGy~VS~--dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~gE~iL 168 (555)
T 3n0f_A 91 LDRFVSSGGFDGVTKTSLHATALSFRLLRQHGFEVSQ--EAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALEGENIL 168 (555)
T ss_dssp HHHHHHTCHHHHHTTTCHHHHHHHHHHHHHTTCCCCG--GGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCHHH
T ss_pred HHHHHhhccccccccCCHHHHHHHHHHHHhcCCCcCh--HHHhcccccCccchhhhhhhhHHHHHHHHHHhcccCCcHHH
Confidence 999998411 00247999999999999999999999 9999998 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCCCcHHHHHHHHhhhHHHHHhhHHHH
Q 040042 161 YEIRNFTTTYLKEYIKHNKDPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPDINHVLLELAKLDFNMVQAKHQEDL 240 (363)
Q Consensus 161 deA~~Ft~~~L~~~~~~~~~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFn~~Q~~hq~EL 240 (363)
|+|+.||++||++.+.+.++++|+++|+|||++|||+++||||||+||++|++++++|++||||||+|||+||++||+||
T Consensus 169 deA~~Fs~~~L~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFN~~Q~~hq~EL 248 (555)
T 3n0f_A 169 DEARVFAISHLKELSEEKIGKELAEQVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDL 248 (555)
T ss_dssp HHHHHHHHHHHHTCCHHHHCHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCchHHHHHHHHhcCCcccCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHHHhHHHH
Confidence 99999999999987643567889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhhhcc
Q 040042 241 ESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVERWD 320 (363)
Q Consensus 241 ~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~aveRWD 320 (363)
++++|||+++||+.+|||||||+||||||++|++||||||.+|++|||+++|+|+|||+||+|||+|||++||+||+|||
T Consensus 249 ~~lsrWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygt~eEl~~ft~ai~RWD 328 (555)
T 3n0f_A 249 RETSRWWRRVGLATKLHFARDRLIESFYWAVGVAFEPQYSDCRNSVAKMFSFVTIIDDIYDVYGTLDELELFTDAVERWD 328 (555)
T ss_dssp HHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCcccCCchhhHHHHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHhcC
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 321 VSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 321 ~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
++++++||+|||+||.+|+|++||+++++.++||+++++|+++
T Consensus 329 ~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~~l~~ 371 (555)
T 3n0f_A 329 VNAINDLPDYMKLCFLALYNTINEIAYDNLKDKGENILPYLTK 371 (555)
T ss_dssp GGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred ccccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 9999999999999999999999999999999999999999874
No 4
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=3.6e-111 Score=873.60 Aligned_cols=334 Identities=42% Similarity=0.744 Sum_probs=317.7
Q ss_pred CCCCCCCCC-----Cccccc-----hHHHHHHHHHHHHHHHHHHhhcccCCccchhhHHHHHHhhCCccchHHHHHHHHH
Q 040042 26 LPRSCHFTP-----FQVQCL-----GKSYAKRIEELKADVRAMLDKAVVMDPLHQFELRDALQRLGVSYHFGDEIKKLRN 95 (363)
Q Consensus 26 ~r~~a~~~p-----~f~~~~-----~~~~~~~~~~Lk~~Vk~~l~~~~~~d~~~~L~lID~LqRLGI~~hFe~EI~~~L~ 95 (363)
.||++|||| +|++++ .+.+.+++++||++||+|+.++ .|++++|+|||+||||||+|||++||+++|+
T Consensus 1 ~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~V~~~~~~~--~d~~~~l~liD~lqrLGi~~hF~~EI~~~L~ 78 (543)
T 2ong_A 1 MRRSGNYNPSRWDVNFIQSLLSDYKEDKHVIRASELVTLVKMELEKE--TDQIRQLELIDDLQRMGLSDHFQNEFKEILS 78 (543)
T ss_dssp CCCCCCCCCCSSCHHHHHHCCCSSCSTHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTGGGTTHHHHHHHHH
T ss_pred CCCCCCCCCCcCCcccccCCCchhhhhHHHHHHHHHHHHHHHHHhcc--cCHHHHHHHHHHHHhCCchhhhHHHHHHHHH
Confidence 389999999 688764 3578999999999999999877 6899999999999999999999999999999
Q ss_pred HHHhhCccc-----C-CCChhHHHHHHHhhhhcCCccccccccccccc-----------cchHHHHHHHHhhcCCCCCch
Q 040042 96 AIYRNNNLQ-----K-QESLYDVALEFRLLRQHGYDTATTASIQLKFF-----------DDWKGILSMYEAAYLLVEGEN 158 (363)
Q Consensus 96 ~iy~~~~~~-----~-~~DL~~~AL~FRLLR~hGy~VSs~~DvF~~F~-----------~dv~glLsLYeAS~l~~~gE~ 158 (363)
++|+++... . ..||++|||+|||||||||+||| |||++|| +||+|||||||||||++|||+
T Consensus 79 ~i~~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~vs~--dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l~~~gE~ 156 (543)
T 2ong_A 79 SIYLDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQ--EVFDSFKNEEGEFKESLSDDTRGLLQLYEASFLLTEGET 156 (543)
T ss_dssp HHHHTTTCCCSSCCCCCCCHHHHHHHHHHHHHTTCCCCG--GGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTTCCSSCH
T ss_pred HHHHhhcccccccccccCCHHHHHHHHHHHHHcCCCccH--HHHhcccCCCCCccchhhhccHHHHHHHHHHHcCCCChH
Confidence 999976421 1 46999999999999999999999 9999998 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-CchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCCCcHHHHHHHHhhhHHHHHhhH
Q 040042 159 IFYEIRNFTTTYLKEYIKHNK-DPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPDINHVLLELAKLDFNMVQAKHQ 237 (363)
Q Consensus 159 iLdeA~~Ft~~~L~~~~~~~~-~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFn~~Q~~hq 237 (363)
|||||+.||++||++.+...+ +++|+++|+|||++|||+++||+|||+||++|++++++|++||||||+|||+||++||
T Consensus 157 iL~eA~~Ft~~~L~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq 236 (543)
T 2ong_A 157 TLESAREFATKFLEEKVNEGGVDGDLLTRIAYSLDIPLHWRIKRPNAPVWIEWYRKRPDMNPVVLELAILDLNIVQAQFQ 236 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHSCTTTSCSTTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHhhhHhccchHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999985425 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhh
Q 040042 238 EDLESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVE 317 (363)
Q Consensus 238 ~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~ave 317 (363)
+||++++|||+++||++++||||||++|||||++|++|||+||.+|+++||++++++++||+||+|||+||++.||+||+
T Consensus 237 ~El~~l~rWwk~~~l~~kl~faRdR~ve~Yfw~~a~~feP~~s~~Rl~~aK~~~litviDD~fD~~gt~eEl~~ft~ai~ 316 (543)
T 2ong_A 237 EELKESFRWWRNTGFVEKLPFARDRLVECYFWNTGIIEPRQHASARIMMGKVNALITVIDDIYDVYGTLEELEQFTDLIR 316 (543)
T ss_dssp HHHHHHHHHHHHHTHHHHSCSSCCCHHHHHHTHHHHTCSTTCHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcccccHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 318 RWDVSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 318 RWD~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
|||++++++||+|||+||.+|+++++|++.++.+.||+++++|+++
T Consensus 317 rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~~~l~~ 362 (543)
T 2ong_A 317 RWDINSIDQLPDYMQLCFLALNNFVDDTSYDVMKEKGVNVIPYLRQ 362 (543)
T ss_dssp TTCSSTTTTSCSHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred hcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 9999999999999999999999999999999999999999998864
No 5
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=7.9e-111 Score=874.80 Aligned_cols=339 Identities=41% Similarity=0.726 Sum_probs=298.7
Q ss_pred cccccCCCCCCCCCCC-----Cccccc-----hHHHHHHHHHHHHHHHHHHhhcccCCccchhhHHHHHHhhCCccchHH
Q 040042 19 RNQISLGLPRSCHFTP-----FQVQCL-----GKSYAKRIEELKADVRAMLDKAVVMDPLHQFELRDALQRLGVSYHFGD 88 (363)
Q Consensus 19 ~~~~~~~~r~~a~~~p-----~f~~~~-----~~~~~~~~~~Lk~~Vk~~l~~~~~~d~~~~L~lID~LqRLGI~~hFe~ 88 (363)
.....+..||++|||| +|++++ .+.+.+++++||++||+|+.++ .|++++|+|||+||||||+|||++
T Consensus 27 ~~~~~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~Vr~~~~~~--~d~~~~l~lID~lqrLGi~~hFe~ 104 (569)
T 2j5c_A 27 DDDDKDRWIRTGGYQPTLWDFSTIQSFDSEYKEEKHLMRAAGMIDQVKMMLQEE--VDSIRRLELIDDLRRLGISCHFER 104 (569)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTCGGGGHH
T ss_pred CCCcccccCCCCCCCCCcCCcccccCCCchhhhHHHHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHhCCchhhhHH
Confidence 3344566899999999 788875 2457899999999999999877 689999999999999999999999
Q ss_pred HHHHHHHHHH-hhCcccCCCChhHHHHHHHhhhhcCCccccccccccccc------------cchHHHHHHHHhhcCCCC
Q 040042 89 EIKKLRNAIY-RNNNLQKQESLYDVALEFRLLRQHGYDTATTASIQLKFF------------DDWKGILSMYEAAYLLVE 155 (363)
Q Consensus 89 EI~~~L~~iy-~~~~~~~~~DL~~~AL~FRLLR~hGy~VSs~~DvF~~F~------------~dv~glLsLYeAS~l~~~ 155 (363)
||+++|+++| +++. ....||++|||+|||||||||+||| |||++|+ +||+|||||||||||++|
T Consensus 105 EI~~~L~~i~~~~~~-~~~~Dl~~~al~FRlLR~hGy~Vs~--dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~ 181 (569)
T 2j5c_A 105 EIVEILNSKYYTNNE-IDERDLYSTALRFRLLRQYDFSVSQ--EVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQ 181 (569)
T ss_dssp HHHHHHHHHTTSSCC-SCTTCHHHHHHHHHHHHHTTCCCCG--GGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHhccC-cccCChhhhhHHhHHHHhcCCCcCH--HHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCC
Confidence 9999999999 7653 2357999999999999999999999 9999996 689999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHhcCC-CchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCCCcHHHHHHHHhhhHHHHH
Q 040042 156 GENIFYEIRNFTTTYLKEYIKHNK-DPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPDINHVLLELAKLDFNMVQA 234 (363)
Q Consensus 156 gE~iLdeA~~Ft~~~L~~~~~~~~-~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFn~~Q~ 234 (363)
||+|||||+.||++||++.+. .+ +++|+++|+|||++|||+++||||||+||++|++++++|++||||||+|||+||+
T Consensus 182 gE~iLdeA~~Ft~~~L~~~~~-~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~ 260 (569)
T 2j5c_A 182 GEETLRLARDFATKFLQKRVL-VDKDINLLSSIERALELPTHWRVQMPNARSFIDAYKRRPDMNPTVLELAKLDFNMVQA 260 (569)
T ss_dssp TCHHHHHHHHHHHHTTSSCC-----CHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHh-hcCCCcHHHHHHHHhcCccccCcHHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHH
Confidence 999999999999999999874 45 8899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHH
Q 040042 235 KHQEDLESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTN 314 (363)
Q Consensus 235 ~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~ 314 (363)
+||+||++++|||+++||++++||||||++|||||++|++|||+||.+|+++||++++++++||+||+|||+|||+.||+
T Consensus 261 ~hq~EL~~l~rWwke~~L~~kl~faRdR~ve~Yfw~~a~~feP~~S~~Rl~~aK~~~litviDD~fD~ygT~eEl~~ft~ 340 (569)
T 2j5c_A 261 QFQQELKEASRWWNSTGLVHELPFVRDRIVECYYWTTGVVERRQHGYERIMLTKINALVTTIDDVFDIYGTLEELQLFTT 340 (569)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHCC--CCCHHHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 315 SVERWDVSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 315 aveRWD~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
||+|||.+++++||+|||+||.+|+++++|++.++.+.||+++++|+++
T Consensus 341 ai~rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~~~l~~ 389 (569)
T 2j5c_A 341 AIQRWDIESMKQLPPYMQICYLALFNFVNEMAYDTLRDKGFDSTPYLRK 389 (569)
T ss_dssp HHHHTSSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 9999999999999999999999999999999999999999999998864
No 6
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=3.4e-110 Score=867.09 Aligned_cols=336 Identities=42% Similarity=0.791 Sum_probs=306.7
Q ss_pred CCCCCCCCCCC-----Cccccc-----hHHHHHHHHHHHHHHHHHHhhcccCCccchhhHHHHHHhhCCccchHHHHHHH
Q 040042 24 LGLPRSCHFTP-----FQVQCL-----GKSYAKRIEELKADVRAMLDKAVVMDPLHQFELRDALQRLGVSYHFGDEIKKL 93 (363)
Q Consensus 24 ~~~r~~a~~~p-----~f~~~~-----~~~~~~~~~~Lk~~Vk~~l~~~~~~d~~~~L~lID~LqRLGI~~hFe~EI~~~ 93 (363)
.+.||++|||| +|++++ .+.+.+++++||++||+|+.++ .|++++|+|||+||||||+|||++||+++
T Consensus 3 ~~~r~~~~~~ps~W~~~fl~s~~~~~~~~~~~~~~~~Lk~~V~~~~~~~--~d~~~~l~lvD~lqrLGi~~hF~~EI~~~ 80 (549)
T 1n1b_A 3 HQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEK--MEPVQQLELIHDLKYLGLSDFFQDEIKEI 80 (549)
T ss_dssp ------------CCCHHHHHHCCCSTTSHHHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHTTCGGGGHHHHHHH
T ss_pred CcCCCCCCCCCCCCCCCcccCCCcchhhhHHHHHHHHHHHHHHHHHhcc--cCHHHHHHhHHHHHhCCchhhhHHHHHHH
Confidence 34699999999 678664 3568899999999999999876 68999999999999999999999999999
Q ss_pred HHHHHhhCcc---c--CCCChhHHHHHHHhhhhcCCccccccccccccc------------cchHHHHHHHHhhcCCCCC
Q 040042 94 RNAIYRNNNL---Q--KQESLYDVALEFRLLRQHGYDTATTASIQLKFF------------DDWKGILSMYEAAYLLVEG 156 (363)
Q Consensus 94 L~~iy~~~~~---~--~~~DL~~~AL~FRLLR~hGy~VSs~~DvF~~F~------------~dv~glLsLYeAS~l~~~g 156 (363)
|+++|+++.. . ...||++|||+|||||||||+||| |||++|+ +||+||||||||||+++||
T Consensus 81 L~~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs~--dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~g 158 (549)
T 1n1b_A 81 LGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQ--DVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKG 158 (549)
T ss_dssp HHHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCG--GGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCTT
T ss_pred HHHHHhhhccccccccccCChhhchhhhhHHHhcCCCcCH--HHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCCC
Confidence 9999987531 1 146999999999999999999999 9999996 6899999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhcC--C-CchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCCCcHHHHHHHHhhhHHHH
Q 040042 157 ENIFYEIRNFTTTYLKEYIKHN--K-DPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPDINHVLLELAKLDFNMVQ 233 (363)
Q Consensus 157 E~iLdeA~~Ft~~~L~~~~~~~--~-~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFn~~Q 233 (363)
|+|||||+.||++||++.+.+. + +++|+++|+|||++|||+++||||||+||++|++++++|++||||||+|||+||
T Consensus 159 E~iL~eA~~Ft~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q 238 (549)
T 1n1b_A 159 EDTLELAREFATKCLQKKLDEGGNEIDENLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQ 238 (549)
T ss_dssp CHHHHHHHHHHHHHHHHHTC------CHHHHHHHHHHHHSCGGGCCTTTSHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccccCCCcHHHHHHHHhcCchhcCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHH
Confidence 9999999999999999998432 4 789999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHH
Q 040042 234 AKHQEDLESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFT 313 (363)
Q Consensus 234 ~~hq~EL~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft 313 (363)
++||+||++++|||+++|+.++|||||||+||||||++|++|||+||.+|+++||++++++++||+||+|||+||++.||
T Consensus 239 ~~hq~El~~l~rWwke~~l~~kl~faRdR~ve~Yfw~~a~~feP~~s~~Rl~~aK~~~l~tviDD~yD~~gt~eEl~~ft 318 (549)
T 1n1b_A 239 ATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMFEPHQHGYQRKMAATIIVLATVIDDIYDVYGTLDELELFT 318 (549)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 314 NSVERWDVSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 314 ~aveRWD~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
+||+|||.+++++||+|||+||.+|+++++|++.++.+.||+++++|+++
T Consensus 319 ~ai~rWD~~~~~~lPeymk~~~~aL~d~~~ei~~~~~~~~~~~~~~~l~~ 368 (549)
T 1n1b_A 319 DTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDILKEHGFFCLQYLRK 368 (549)
T ss_dssp HHHHHTCSSGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHhcCccccccCccHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999998864
No 7
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=9.4e-103 Score=837.52 Aligned_cols=316 Identities=31% Similarity=0.526 Sum_probs=295.5
Q ss_pred HHHHHHHHHHHHHHHhhcc---cCCccchhhHHHHHHhhCCccchHHHHHHHHHHHHhhCccc--------CCCChhHHH
Q 040042 45 AKRIEELKADVRAMLDKAV---VMDPLHQFELRDALQRLGVSYHFGDEIKKLRNAIYRNNNLQ--------KQESLYDVA 113 (363)
Q Consensus 45 ~~~~~~Lk~~Vk~~l~~~~---~~d~~~~L~lID~LqRLGI~~hFe~EI~~~L~~iy~~~~~~--------~~~DL~~~A 113 (363)
.++.+.|...|++.-.++| |.+++++|++||+||||||+|||++||+++|+++|++|.+. ...||++||
T Consensus 245 ~~~~~YL~~~~~~~~g~VP~~yP~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tA 324 (785)
T 3s9v_A 245 KKCLDFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTA 324 (785)
T ss_dssp HHHHHHHHHHHHHHSSCCCSSCCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCCCcCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHH
Confidence 4677888888887533333 57999999999999999999999999999999999976521 236999999
Q ss_pred HHHHhhhhcCCccccccccccccc--------------cchHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHHhc--
Q 040042 114 LEFRLLRQHGYDTATTASIQLKFF--------------DDWKGILSMYEAAYLLVEGENIFYEIRNFTTTYLKEYIKH-- 177 (363)
Q Consensus 114 L~FRLLR~hGy~VSs~~DvF~~F~--------------~dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~-- 177 (363)
|+|||||||||+||| |||++|+ +|++||||||||||+++|||+|||||+.||++||++.+.+
T Consensus 325 l~FRlLR~~Gy~VS~--dvf~~F~d~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~ 402 (785)
T 3s9v_A 325 MGLRILRLHGYNVSS--DVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVD 402 (785)
T ss_dssp HHHHHHHHTTCCCCG--GGGGGGBCTTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHhcCCCCCH--HHHHHHHhcCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 9999997 6999999999999999999999999999999999998743
Q ss_pred -----CCCchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCC------------CcHHHHHHHHhhhHHHHHhhHHHH
Q 040042 178 -----NKDPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPD------------INHVLLELAKLDFNMVQAKHQEDL 240 (363)
Q Consensus 178 -----~~~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~------------~n~~lLelAKlDFn~~Q~~hq~EL 240 (363)
.++++|+++|+|||++|||+++||||||+||++|++++. +|++||||||+|||+||++||+||
T Consensus 403 ~~d~~~~~~~L~~eV~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL 482 (785)
T 3s9v_A 403 AFDKWAFKKNIRGEVEYALKYPWHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTEL 482 (785)
T ss_dssp TTCTTCSSSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCcHHHHHHHHhCCccccCchHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 256889999999999999999999999999999998875 499999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhhhcc
Q 040042 241 ESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVERWD 320 (363)
Q Consensus 241 ~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~aveRWD 320 (363)
++++||||++|+ .+|||||||+||||||++|++||||||.+|++|||+++|+|+|||+||+|||+|||++||+||+|||
T Consensus 483 ~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygT~eEl~~ft~ai~RWD 561 (785)
T 3s9v_A 483 QDLRRWWKSSGF-TDLNFTRERVTEIYFSPASFIFEPEFSKCREVYTKTSNFTVILDDLYDAHGSLDDLKLFTESVKRWD 561 (785)
T ss_dssp HHHHHHHHHTTT-TSCSSSCCCHHHHHHHHHHHSCSGGGHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHTS
T ss_pred HHHhHHHHHcCC-CcCccHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHcC
Confidence 999999999999 6999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 321 VSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 321 ~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
++++++||+|||+||.+|+|++|||++++.++||+++++|+++
T Consensus 562 ~~~~~~Lpeymk~~f~aL~~~~nei~~~~~~~~g~~~~~ylk~ 604 (785)
T 3s9v_A 562 LSLVDQMPQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQN 604 (785)
T ss_dssp SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred chhhhcCChhHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 9999999999999999999999999999999999999999874
No 8
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=6.3e-103 Score=841.72 Aligned_cols=316 Identities=34% Similarity=0.556 Sum_probs=294.9
Q ss_pred HHHHHHHHHHHHHHHhhcc---cCCccchhhHHHHHHhhCCccchHHHHHHHHHHHHhhCcc--------cCCCChhHHH
Q 040042 45 AKRIEELKADVRAMLDKAV---VMDPLHQFELRDALQRLGVSYHFGDEIKKLRNAIYRNNNL--------QKQESLYDVA 113 (363)
Q Consensus 45 ~~~~~~Lk~~Vk~~l~~~~---~~d~~~~L~lID~LqRLGI~~hFe~EI~~~L~~iy~~~~~--------~~~~DL~~~A 113 (363)
.++.+.|...|++.-.+.| |.+++++|++||+||||||+|||++||+++|+++|++|.+ ....||++||
T Consensus 273 ~~~~~YL~~~~~~~~g~VP~~yP~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tA 352 (817)
T 3sdr_A 273 AKCLEFLNSVMIKFGNFVPCLYPVDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTA 352 (817)
T ss_dssp HHHHHHHHHHHHHHSSCCCSSSCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCCccCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHH
Confidence 4677888888887533332 6799999999999999999999999999999999997652 1236999999
Q ss_pred HHHHhhhhcCCccccccccccccc--------------cchHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHHhc--
Q 040042 114 LEFRLLRQHGYDTATTASIQLKFF--------------DDWKGILSMYEAAYLLVEGENIFYEIRNFTTTYLKEYIKH-- 177 (363)
Q Consensus 114 L~FRLLR~hGy~VSs~~DvF~~F~--------------~dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~-- 177 (363)
|+|||||||||+||| |||++|+ +|++||||||||||+++|||+|||||+.||++||++.+.+
T Consensus 353 l~FRlLR~~Gy~VS~--dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~ 430 (817)
T 3sdr_A 353 LGFRLLRLHRYNVSP--AIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSE 430 (817)
T ss_dssp HHHHHHHHTTCCCCG--GGGGGGBCC--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHcCCCccH--hHHHHHhhcCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 9999997 6999999999999999999999999999999999998742
Q ss_pred C-----CCchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCC------------CcHHHHHHHHhhhHHHHHhhHHHH
Q 040042 178 N-----KDPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPD------------INHVLLELAKLDFNMVQAKHQEDL 240 (363)
Q Consensus 178 ~-----~~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~------------~n~~lLelAKlDFn~~Q~~hq~EL 240 (363)
. ++++|+++|+|||++|||+++||||||+||++|++++. +|++||||||+|||+||++||+||
T Consensus 431 ~~~~~~~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL 510 (817)
T 3sdr_A 431 TSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEM 510 (817)
T ss_dssp GGSHHHHHTTHHHHHHHHHHCCSTTCCHHHHHHHHHTTCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCcHHHHHHHHhcCchhccChHHHHHHHHHHhCccchhhhhhcccccccccHHHHHHHHHHHHHHHHHhhhhh
Confidence 1 24779999999999999999999999999999998775 499999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhhhcc
Q 040042 241 ESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVERWD 320 (363)
Q Consensus 241 ~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~aveRWD 320 (363)
++++||||++|+ .+|||||||+||||||++|++||||||.+|++|||+++|+|+|||+||+|||+|||++||+||+|||
T Consensus 511 ~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygT~eEl~~ft~ai~RWD 589 (817)
T 3sdr_A 511 KNVTSWFRDSGL-PLFTFARERPLEFYFLVAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVRRWD 589 (817)
T ss_dssp HHHHHHHHHSSG-GGCTTSCCCHHHHHHHHHTTSCCGGGHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTC
T ss_pred hhhceeHHhcCC-CcCccHHHHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHcC
Confidence 999999999999 6999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 321 VSAMDQHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 321 ~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
++++++||+|||+||.+|+|++||+++++.++||+++++|+++
T Consensus 590 ~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~~l~~ 632 (817)
T 3sdr_A 590 LSFTENLPDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRK 632 (817)
T ss_dssp GGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred chhhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 9999999999999999999999999999999999999999874
No 9
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=4.6e-102 Score=830.19 Aligned_cols=314 Identities=30% Similarity=0.512 Sum_probs=294.2
Q ss_pred HHHHHHHHHHHHHHHhhcc---cCCccchhhHHHHHHhhCCccchHHHHHHHHHHHHhhCcc-------c-CCCChhHHH
Q 040042 45 AKRIEELKADVRAMLDKAV---VMDPLHQFELRDALQRLGVSYHFGDEIKKLRNAIYRNNNL-------Q-KQESLYDVA 113 (363)
Q Consensus 45 ~~~~~~Lk~~Vk~~l~~~~---~~d~~~~L~lID~LqRLGI~~hFe~EI~~~L~~iy~~~~~-------~-~~~DL~~~A 113 (363)
.++.+.|...|++.-.++| |.+++++|++||+||||||+|||++||+++|+++|++|.+ . ...||++||
T Consensus 221 ~~~~~YL~~~~~~~~g~VP~~yP~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tA 300 (764)
T 3p5p_A 221 EKCFTFLNNLLDKFGGCVPCMYSIDLLERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTA 300 (764)
T ss_dssp HHHHHHHHHHHHHHTSCCCSSCCCHHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCCCcCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHH
Confidence 4677888888887633333 6799999999999999999999999999999999997652 1 136999999
Q ss_pred HHHHhhhhcCCccccccccccccc--------------cchHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHHhc--
Q 040042 114 LEFRLLRQHGYDTATTASIQLKFF--------------DDWKGILSMYEAAYLLVEGENIFYEIRNFTTTYLKEYIKH-- 177 (363)
Q Consensus 114 L~FRLLR~hGy~VSs~~DvF~~F~--------------~dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~-- 177 (363)
|+|||||||||+||| |||++|+ +|++||||||||||+++|||+|||||+.||++||++.+++
T Consensus 301 l~FRlLR~~Gy~VS~--dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~ 378 (764)
T 3p5p_A 301 LGLRTLRMHGYNVSS--DVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKI 378 (764)
T ss_dssp HHHHHHHHTTCCCCG--GGGGGGBCTTSCBCSCTTCSCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCCccH--hHHHhhhcCCCCccccccccccccHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999 9999997 6999999999999999999999999999999999998753
Q ss_pred CCCchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCC------------CcHHHHHHHHhhhHHHHHhhHHHHHHHHH
Q 040042 178 NKDPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPD------------INHVLLELAKLDFNMVQAKHQEDLESVSE 245 (363)
Q Consensus 178 ~~~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~------------~n~~lLelAKlDFn~~Q~~hq~EL~~lsr 245 (363)
.++++|+++|+|||++|||+++||||||+||++|++++. +|++||||||+|||+||++||+||++++|
T Consensus 379 ~~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l~r 458 (764)
T 3p5p_A 379 STNTKLFKEIEYVVEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTR 458 (764)
T ss_dssp CSSSHHHHHHHHHHHSCGGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHhcCchhccchHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHhHHHhhhhce
Confidence 367899999999999999999999999999999998765 49999999999999999999999999999
Q ss_pred HHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhhhccccccc
Q 040042 246 WWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVERWDVSAMD 325 (363)
Q Consensus 246 Ww~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~aveRWD~~~~~ 325 (363)
|||++|+ .+|||||||+||||||++| ||||||.+|++|||+++|+|+|||+||+|||+|||++||+||+|||+++++
T Consensus 459 Wwk~~~l-~~l~faRdr~ve~Yfw~~~--feP~~s~~R~~~aK~~~l~tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~ 535 (764)
T 3p5p_A 459 WWKESGM-ADINFTRHRVAEVYFSSAT--FEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVKRWDTSLLH 535 (764)
T ss_dssp HHHHTST-TTTTCCHHHHHHHHHHTCC--CCGGGHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTSSTTGG
T ss_pred eHHhcCC-CcCccHHHHHHHHHHHHHh--CCccchHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHcCchhhh
Confidence 9999999 6999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 326 QHPYYLKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 326 ~Lpeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
+||+|||+||.+|+|++|||++++.++||+++++|+++
T Consensus 536 ~LPeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~yl~~ 573 (764)
T 3p5p_A 536 EIPECMQTCFKVWFKLMEEVNNDVVKVQGRDMLAHIRK 573 (764)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHH
Confidence 99999999999999999999999999999999999874
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=1.7e-100 Score=812.60 Aligned_cols=314 Identities=25% Similarity=0.352 Sum_probs=287.6
Q ss_pred HHHHHHHHHHHHHHHhhcc---cCCccchhhHHHHHHhhCCccchHHHHHHHHHHHHhhCccc--------CCCChhHHH
Q 040042 45 AKRIEELKADVRAMLDKAV---VMDPLHQFELRDALQRLGVSYHFGDEIKKLRNAIYRNNNLQ--------KQESLYDVA 113 (363)
Q Consensus 45 ~~~~~~Lk~~Vk~~l~~~~---~~d~~~~L~lID~LqRLGI~~hFe~EI~~~L~~iy~~~~~~--------~~~DL~~~A 113 (363)
.++.+.|+..|+++..++| |.+++++|++||+||||||+|||++||+++|+++|++|.+. ...|+++||
T Consensus 220 ~~~l~YL~~~v~k~~g~VP~~yP~d~~e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~tA 299 (727)
T 3pya_A 220 SNCLEYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTA 299 (727)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSCCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHHH
Confidence 5788999999999876543 68999999999999999999999999999999999975421 235999999
Q ss_pred HHHHhhhhcCCccccccccccccc-------------cchHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHHhc-C-
Q 040042 114 LEFRLLRQHGYDTATTASIQLKFF-------------DDWKGILSMYEAAYLLVEGENIFYEIRNFTTTYLKEYIKH-N- 178 (363)
Q Consensus 114 L~FRLLR~hGy~VSs~~DvF~~F~-------------~dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~-~- 178 (363)
|+|||||||||+||| |||++|+ +|++|||+||||||+++|||+|||||+.||++||++.+.+ .
T Consensus 300 L~FRLLRqhGy~VS~--DvF~~Fk~~G~F~~~~~e~~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~ 377 (727)
T 3pya_A 300 MAFRLLRQHGYQVSA--DVFKNFEKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREEL 377 (727)
T ss_dssp HHHHHHHHTTCCCCG--GGGGGGEETTEECSSTTCCCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCCH--HHHHhccCCCcccccccccccccHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999 9999996 5999999999999999999999999999999999998743 2
Q ss_pred -----CCchHHHHHHHhccCcccccchhhHHHHHHHHhcCCCC-------------CcHHHHHHHHhhhHHHHHhhHHHH
Q 040042 179 -----KDPYILTLVNHALELPLHWRMQRMETRWFIDAYESGPD-------------INHVLLELAKLDFNMVQAKHQEDL 240 (363)
Q Consensus 179 -----~~~~L~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~-------------~n~~lLelAKlDFn~~Q~~hq~EL 240 (363)
++++|+++|+|||++|||+++||+|||+||+.|+++++ +|++||||||+|||+||++||+||
T Consensus 378 ~dkw~~~~~L~~~V~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL 457 (727)
T 3pya_A 378 IDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLEW 457 (727)
T ss_dssp CCSSEECSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCCGGGCEEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCcHHHHHHHHhcCcHhcCChHHHHHHHHHHhccCcchhhhhhhccccccccHHHHHHHHHhHHHHHHHhHHHH
Confidence 25789999999999999999999999999999997654 699999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhhhcc
Q 040042 241 ESVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVERWD 320 (363)
Q Consensus 241 ~~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~aveRWD 320 (363)
++++||||++|+ .+|||||||+||||||++|++||||||.+|++|||+++|+|+|||+||+|| |||++||+||+|||
T Consensus 458 ~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~yG--eEl~~ft~av~rwd 534 (727)
T 3pya_A 458 DIFQKWYEENRL-SEWGVRRSELLECYYLAAATIFESERSHERMVWAKSSVLVKAISSSFGESS--DSRRSFSDQFHEYI 534 (727)
T ss_dssp HHHHHHHHHTTG-GGGTCCHHHHHHHHHHHHTTSCCGGGHHHHHHHHHHHHHHHHHHHHHCSSH--HHHHHHHHHHHHHC
T ss_pred hhhheeHHhcCc-ccCCchhhHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHhcc
Confidence 999999999999 579999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cc---------cccC---CChH--HHHHHHHHHHHHHHHHHHHHhccCCccchhccC
Q 040042 321 VS---------AMDQ---HPYY--LKFCFLALHNFIMKLLLTLSKKKKLTSFVILKK 363 (363)
Q Consensus 321 ~~---------~~~~---Lpey--mk~~f~aL~~~~~ei~~~~~~~~g~~~~~~lk~ 363 (363)
++ +++. +|+| ||+||.|||||+||+++++.++||+++++|+++
T Consensus 535 ~~~~~~~~~~~~~~~~~~~p~~~~mk~~f~aL~~t~nei~~~~~k~qg~~v~~~l~~ 591 (727)
T 3pya_A 535 ANARRSDHHFNDRNMRLDRPGSVQASRLAGVLIGTLNQMSFDLFMSHGRDVNNLLYL 591 (727)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred cccccccccccchhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 74 4443 3888 999999999999999999999999999999974
No 11
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.83 E-value=2.4e-21 Score=183.82 Aligned_cols=111 Identities=11% Similarity=-0.019 Sum_probs=101.7
Q ss_pred hhHHHHHHHHH-HHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhH-hHHhHHHHHhhhhhhhcccCCHHHHHHH
Q 040042 235 KHQEDLESVSE-WWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRR-MSTKVSALITSIDDAYDVYGTLDELKLF 312 (363)
Q Consensus 235 ~hq~EL~~lsr-Ww~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri-~~aK~~~litviDD~yD~yGtleEl~~f 312 (363)
-|.+|++..++ ||+++|+. ++||+|+|+++||||.++++++|+++.+|+ ++||.+++++++||+||. ||++|++.|
T Consensus 13 P~~~~~~~~~~~W~~~~~l~-~~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~~k~~~~~~~~DD~~D~-~~~~e~~~~ 90 (300)
T 1di1_A 13 PRVKEVQDEVDGYFLENWKF-PSFKAVRTFLDAKFSEVTCLYFPLALDDRIHFACRLLTVLFLIDDVLEH-MSFADGEAY 90 (300)
T ss_dssp TTHHHHHHHHHHHHHHHSCC-SSHHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHHH-SCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCC-CCHHHHHHHHhcCcchhhhhcCCCCCHHHHHHHHHHHHHHHHHHhcccc-CCHHHHHHH
Confidence 46777776554 66999996 679999999999999999999999999999 999999999999999999 899999999
Q ss_pred HHHhhhcccccccCCChHHHHHHHHHHHHHHHHHHHH
Q 040042 313 TNSVERWDVSAMDQHPYYLKFCFLALHNFIMKLLLTL 349 (363)
Q Consensus 313 t~aveRWD~~~~~~Lpeymk~~f~aL~~~~~ei~~~~ 349 (363)
|+++.||+.+ +.+|+||+.||.+|++++++++..+
T Consensus 91 ~~~~~~~~~~--~~lp~~~~~~~~~l~d~~~~~~~~~ 125 (300)
T 1di1_A 91 NNRLIPISRG--DVLPDRTKPEEFILYDLWESMRAHD 125 (300)
T ss_dssp HHHHHHHHHT--SSCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccC--CCCCCCccHHHHHHHHHHHHHHhhC
Confidence 9999999875 5789999999999999999998865
No 12
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.83 E-value=3.3e-21 Score=184.93 Aligned_cols=115 Identities=10% Similarity=-0.009 Sum_probs=103.4
Q ss_pred HHHHhhHHHHHHHHH-HHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhH-hHHhHHHHHhhhhhhhcccCCHHH
Q 040042 231 MVQAKHQEDLESVSE-WWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRR-MSTKVSALITSIDDAYDVYGTLDE 308 (363)
Q Consensus 231 ~~Q~~hq~EL~~lsr-Ww~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri-~~aK~~~litviDD~yD~yGtleE 308 (363)
.-..-|.+|++..++ ||+++|+..+ ||+|+|+++||||.++++++|+++.+|+ ++||.+++++++||+||. ||++|
T Consensus 23 ~~~~p~~~e~~~~~~~W~~~~~l~~~-~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~-~~~~e 100 (320)
T 3bny_A 23 PLCHPLVEEVSKEVDGYFLQHWNFPN-EKARKKFVAAGFSRVTCLYFPKALDDRIHFACRLLTVLFLIDDLLEY-MSFEE 100 (320)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHSCCSS-HHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHTT-SCHHH
T ss_pred CCCCcCHHHHHHHHHHHHHHcCCCCC-hHHHHHHHhcCchhhHhhhCCCCCHHHHHHHHHHHHHHHHhhccccc-CChhh
Confidence 334567788876555 6699999655 9999999999999999999999999999 899999999999999999 89999
Q ss_pred HHHHHHHhhhcccccccCCChHHHHHHHHHHHHHHHHHHHH
Q 040042 309 LKLFTNSVERWDVSAMDQHPYYLKFCFLALHNFIMKLLLTL 349 (363)
Q Consensus 309 l~~ft~aveRWD~~~~~~Lpeymk~~f~aL~~~~~ei~~~~ 349 (363)
++.||++++||+.+ +.+|+||+.+|.+|++++++++..+
T Consensus 101 ~~~~~~~l~~~~~~--~~~p~~~~~~~~al~d~~~e~~~~~ 139 (320)
T 3bny_A 101 GSAYNEKLIPISRG--DVLPDRSIPVEYIIYDLWESMRAHD 139 (320)
T ss_dssp HHHHHHHHHHHHHT--SSCCCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--CCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999999999975 5789999999999999999998864
No 13
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.81 E-value=1.4e-21 Score=188.80 Aligned_cols=114 Identities=12% Similarity=0.055 Sum_probs=102.9
Q ss_pred HHhhHHHHHHH-HHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhH-hHHhHHHHHhhhhhhhccc--CCHHH
Q 040042 233 QAKHQEDLESV-SEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRR-MSTKVSALITSIDDAYDVY--GTLDE 308 (363)
Q Consensus 233 Q~~hq~EL~~l-srWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri-~~aK~~~litviDD~yD~y--GtleE 308 (363)
.+.|.+|++.. ++||+++|+.. .||+|+|+++||||.+|++|+|+++.+|+ ++||.+++++++||+||.| ||++|
T Consensus 15 ~~p~~~e~~~~~~~W~~~~~l~~-~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~~~~~~~ee 93 (337)
T 1ps1_A 15 QSPDHARAEAEQLAWPRSLGLIR-SDAAAERHLRGGYADLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGENPED 93 (337)
T ss_dssp CCTTHHHHHHSTTHHHHHTTSCC-SHHHHHHHHTTCHHHHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGGCHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHhCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhhccCCcCCCCHHH
Confidence 45677777654 46999999964 69999999999999999999999999999 9999999999999999999 69999
Q ss_pred HHHHHHHhhhcccccccCCChHHHHHHHHHHHHHHHHHHHHH
Q 040042 309 LKLFTNSVERWDVSAMDQHPYYLKFCFLALHNFIMKLLLTLS 350 (363)
Q Consensus 309 l~~ft~aveRWD~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~ 350 (363)
++.||++++||+.+ .+|+||+.+|.+++++.++++..+.
T Consensus 94 ~~~~~~~l~~~~~~---~~p~~~~~~~~~l~d~~~~~~~~~~ 132 (337)
T 1ps1_A 94 TKQLTDQVAAALDG---PLPDTAPPIAHGFADIWRRTCEGMT 132 (337)
T ss_dssp HHHHHHHHHGGGTS---CCCTTSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcCC---CCCCCCChHHHHHHHHHHHHhccCC
Confidence 99999999999864 5899999999999999999987653
No 14
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.43 E-value=1.9e-14 Score=142.66 Aligned_cols=108 Identities=8% Similarity=-0.087 Sum_probs=95.1
Q ss_pred HHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCchhhhH-hHHhHHHHHhhhhhhhcc--cC-CHHHHHHHHHHhh
Q 040042 242 SVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQFGYFRR-MSTKVSALITSIDDAYDV--YG-TLDELKLFTNSVE 317 (363)
Q Consensus 242 ~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~s~~Ri-~~aK~~~litviDD~yD~--yG-tleEl~~ft~ave 317 (363)
++.+||+++|+. .-+++|+|+++||||.++++++|+++..|+ ++||.+++++++||+||. +| +++|++.|++++.
T Consensus 65 ~~~~W~~~~gl~-~~~~~r~r~~~~~~~~laa~~~P~as~erL~l~a~~~~w~f~~DD~~D~~~~g~~~~~~~~~~~~l~ 143 (382)
T 3kb9_A 65 TTRTWLLEKRLM-PADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLH 143 (382)
T ss_dssp HHHHHHHHTTSS-CHHHHHHHHHHHCHHHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-CCHHHHHHHHhCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhhcccccccccCHHHHHHHHHHHH
Confidence 367899999994 448999999999999999999999999999 999999999999999997 77 9999999999999
Q ss_pred hcccccccCCChHHHHHHHHHHHHHHHHHHHHHh
Q 040042 318 RWDVSAMDQHPYYLKFCFLALHNFIMKLLLTLSK 351 (363)
Q Consensus 318 RWD~~~~~~Lpeymk~~f~aL~~~~~ei~~~~~~ 351 (363)
++ ++....+|++++.++.++.++.++++..+.+
T Consensus 144 ~~-l~~~~~~p~~~~p~~~al~dl~~~~~~~~~~ 176 (382)
T 3kb9_A 144 TA-LDSPGDHLHHEDTLVAGFADSVRRLYAFLPA 176 (382)
T ss_dssp HH-HHSCGGGTTCSSHHHHHHHHHHHHHTTSSCH
T ss_pred HH-hcCCCCCCCCCChHHHHHHHHHHHHHccCCH
Confidence 86 2223336899999999999999999866544
No 15
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=87.81 E-value=0.2 Score=54.25 Aligned_cols=36 Identities=33% Similarity=0.489 Sum_probs=22.1
Q ss_pred CCCCCCCCCC-----Cccccc-----hHHHHHHHHHHHHHHHHHHh
Q 040042 25 GLPRSCHFTP-----FQVQCL-----GKSYAKRIEELKADVRAMLD 60 (363)
Q Consensus 25 ~~r~~a~~~p-----~f~~~~-----~~~~~~~~~~Lk~~Vk~~l~ 60 (363)
+.||+|||+| +|++|+ ++.+.+++++|+++||+|+.
T Consensus 23 ~~Rrsany~Ps~W~~~~i~sl~~~~~~~~~~~~~~~Lie~VK~~l~ 68 (817)
T 3sdr_A 23 LIRRTANPHPNVWGYDLVHSLKSPYIDSSYRERAEVLVSEIKAMLN 68 (817)
T ss_dssp ------------CHHHHHHTCCCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCCCCCCeeeccCCcccchhHHHHHHHHHHHHHHHhc
Confidence 4799999999 677774 56788999999999999997
No 16
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=70.36 E-value=6.8 Score=39.17 Aligned_cols=112 Identities=12% Similarity=0.058 Sum_probs=62.1
Q ss_pred HHHHHHHHhccCCCCccccchhhHHHHHHhhcccCCCc-hhhhH-hHHhHHHHHhhhhhhh-cccC-CHHHH-HHHHH--
Q 040042 242 SVSEWWEYVGFGNKLNFARDRLMENFLWTVGVTSEPQF-GYFRR-MSTKVSALITSIDDAY-DVYG-TLDEL-KLFTN-- 314 (363)
Q Consensus 242 ~lsrWw~~~~l~~~L~faRdr~ve~yfwa~~~~fEP~~-s~~Ri-~~aK~~~litviDD~y-D~yG-tleEl-~~ft~-- 314 (363)
++..|-.+.++... +-.|++...+=|--++.+.-|.= +..|+ ..+|......++||.| |..| +.+.+ ..+..
T Consensus 134 ~~~~W~~~~~~l~~-~~~~~~~~~~~~~llaa~~yP~A~~~e~L~l~ad~~~W~F~~DD~~~D~~g~s~~~~~~~l~~a~ 212 (433)
T 3v1v_A 134 RIKRWAEDEVQLYP-EEWEGQFDGFSVGRYMVGCHPDAPTVDHLMLATRLMVAENAVDDCYCEDHGGSPVGLGGRLLLAH 212 (433)
T ss_dssp HHHHHHHHTSCCCC-----CCSCHHHHHHHHHHHCTTCSSHHHHHHHHHHHHHHHHHHHHHTC----CCTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCCC-HHHHHHHHhcCHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhHHHHHHHH
Confidence 56678888765222 33466666666655556666776 67777 7889999999999995 9865 33321 12222
Q ss_pred -HhhhcccccccCCChH-----HHHHHHHHHHHHHHHHHHHHhccCC
Q 040042 315 -SVERWDVSAMDQHPYY-----LKFCFLALHNFIMKLLLTLSKKKKL 355 (363)
Q Consensus 315 -aveRWD~~~~~~Lpey-----mk~~f~aL~~~~~ei~~~~~~~~g~ 355 (363)
++..-. ...+.-|.. -.-+-.+++++++++...+.+.+..
T Consensus 213 ~~~d~l~-~~~~g~p~~~~~~~~dp~~~al~d~~~~l~~~a~~~q~~ 258 (433)
T 3v1v_A 213 TAIDHFH-STAEYTPTWQASLAADAPRRAYDSAMGYFVRAATPSQSD 258 (433)
T ss_dssp TTTSCCC-CCTTTHHHHHHHTTSSHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHhhh-cccCCCCccccccCCchHHHHHHHHHHHHHhhcCHHHHH
Confidence 221110 001100100 0134688999999998776665543
No 17
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=43.78 E-value=1e+02 Score=23.11 Aligned_cols=60 Identities=10% Similarity=0.186 Sum_probs=34.0
Q ss_pred CCccchhhHHHHHHhhCCccchHHHHHHHHHHHHhhCccc-CCCChhHHHHHHHhhh-hcCCcccc
Q 040042 65 MDPLHQFELRDALQRLGVSYHFGDEIKKLRNAIYRNNNLQ-KQESLYDVALEFRLLR-QHGYDTAT 128 (363)
Q Consensus 65 ~d~~~~L~lID~LqRLGI~~hFe~EI~~~L~~iy~~~~~~-~~~DL~~~AL~FRLLR-~hGy~VSs 128 (363)
+..+..=++...+.++|++ ++|+++++..+=...++. +..+.. .+|.-.-.+ +.|+.++.
T Consensus 24 dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~D~d~dG~i~~~EF~-~~~~~~~~~~~~g~~lP~ 85 (95)
T 1c07_A 24 DGFVSGLEVREIFLKTGLP---STLLAHIWSLCDTKDCGKLSKDQFA-LAFHLISQKLIKGIDPPH 85 (95)
T ss_dssp SSEECHHHHHHHHHTTTCC---HHHHHHHHHHHCTTCSSSEETTTHH-HHHHHHHHHHTSCCCCCS
T ss_pred CCcEeHHHHHHHHHHcCCC---HHHHHHHHHHHCCCCCCcCCHHHHH-HHHHHHHHHHHcCCCCCC
Confidence 3456666788889999976 677777665442111111 112332 233333334 78998876
No 18
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=35.07 E-value=1.1e+02 Score=23.36 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=40.0
Q ss_pred CccchhhHHHHHHhhCCccchHHHHHHHHHHHHhhCcccCCCChhHHHHHHHhhhhcCCccccccccc
Q 040042 66 DPLHQFELRDALQRLGVSYHFGDEIKKLRNAIYRNNNLQKQESLYDVALEFRLLRQHGYDTATTASIQ 133 (363)
Q Consensus 66 d~~~~L~lID~LqRLGI~~hFe~EI~~~L~~iy~~~~~~~~~DL~~~AL~FRLLR~hGy~VSs~~DvF 133 (363)
..+..=++...+.++|++ ++|++++++.+=...++....+=...+|.-.-+.|+|+.++. +.+
T Consensus 26 G~Is~~el~~~l~~~~l~---~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g~~~~~--~~l 88 (99)
T 1qjt_A 26 GRVLALDAAAFLKKSGLP---DLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSL--SSL 88 (99)
T ss_dssp SCCCSHHHHHHHHTSSSC---HHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTCCSSG--GGC
T ss_pred CcCCHHHHHHHHHHcCCC---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHcCCCCCh--hhc
Confidence 445566778888999976 677777665542222211112334466777788899999997 554
No 19
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=33.56 E-value=29 Score=24.99 Aligned_cols=33 Identities=30% Similarity=0.341 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhhcccCCccchhhHHHHHHhh
Q 040042 46 KRIEELKADVRAMLDKAVVMDPLHQFELRDALQRL 80 (363)
Q Consensus 46 ~~~~~Lk~~Vk~~l~~~~~~d~~~~L~lID~LqRL 80 (363)
+++.-|.++||+-|..+ .+.++++.++.+||-|
T Consensus 16 EeIRwlIeE~Rh~Lk~T--ensfeQItfmqalQLl 48 (58)
T 1pd3_A 16 EEIRWLIEEVRHRLKIT--ENSFEQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHHHHHHTCCCC--TTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh--hchHHHHHHHHHHHHH
Confidence 34445678888888776 7899999999999864
No 20
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=28.98 E-value=69 Score=23.82 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=39.3
Q ss_pred HHHHHHHhhc-cc-CCccchhhHHHHHHhhCCccchHHHHHHHHHHHHhhCcccCCCChhH--HHHHHHhhhhcCCcccc
Q 040042 53 ADVRAMLDKA-VV-MDPLHQFELRDALQRLGVSYHFGDEIKKLRNAIYRNNNLQKQESLYD--VALEFRLLRQHGYDTAT 128 (363)
Q Consensus 53 ~~Vk~~l~~~-~~-~d~~~~L~lID~LqRLGI~~hFe~EI~~~L~~iy~~~~~~~~~DL~~--~AL~FRLLR~hGy~VSs 128 (363)
+++++.|..- .+ +..+..=++...+.++|++ +.|+++++..+=...++ .-|... .+|.-.-.++.|+.+++
T Consensus 9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~D~d~dG--~i~~~EF~~~~~~~~~~~~g~~lp~ 83 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLP---ILELSHIWELSDFDKDG--ALTLDEFCAAFHLVVARKNGYDLPE 83 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSC---HHHHHHHHHHHCTTCSS--EEEHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCC---HHHHHHHHHHHCCCCCC--CCCHHHHHHHHHHHHHHHcCCCCCc
Confidence 4556666431 00 3456667788889999976 56777766543111111 112222 33333345678999887
No 21
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=26.72 E-value=41 Score=32.85 Aligned_cols=54 Identities=9% Similarity=-0.015 Sum_probs=35.8
Q ss_pred chhhHHHHHHhhcccCCCchh-hhHhHHhHHHHHhhhhhhhcccCCHHHHHHHHHHhh
Q 040042 261 DRLMENFLWTVGVTSEPQFGY-FRRMSTKVSALITSIDDAYDVYGTLDELKLFTNSVE 317 (363)
Q Consensus 261 dr~ve~yfwa~~~~fEP~~s~-~Ri~~aK~~~litviDD~yD~yGtleEl~~ft~ave 317 (363)
++.+.+=.| ++..+=|.-+. .....++..+++.++||.+|.-+ +++..|.+.+-
T Consensus 64 ~~~~~t~~~-laar~YP~a~~e~l~liad~~~~~F~lDD~~d~~~--~~l~~~~~~ll 118 (374)
T 1yyq_A 64 QASLQTIVG-MVVYSWAKVSKECMADLSIHYTYTLVLDDSKDDPY--PTMVNYFDDLQ 118 (374)
T ss_dssp HHHHHHHHH-HHHHHSTTSCHHHHHHHHHHHHHHHHHTTCCSCSH--HHHTTHHHHHH
T ss_pred HHHHHHHHH-HHhhcCCCCCHHHHHHHHHHHHHHHhhcccccCcH--HHHHHHHHHHh
Confidence 344444455 33444555444 45688999999999999998543 67777777653
Done!