BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040050
(401 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 180/301 (59%), Gaps = 15/301 (4%)
Query: 63 KLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ 122
+L F+L EL++ + NFS N+LG GGFG VYKG +L G VAVK L + Q
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----RLADG---TLVAVKRLKEERXQ 76
Query: 123 GHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP- 180
G + ++ E+ + H +L++L G+C RLLVY YM GS+ + L + P
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 136
Query: 181 -WSTRMKIALGAAKGLAFLHGEDKP-VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE 238
W R +IALG+A+GLA+LH P +I+RD KA+NILLD ++ A + DFGLAK + +
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYK 195
Query: 239 ETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQS-- 296
+ HV V GT G+ APEY+ TG + +DV+ +GV+LLEL+TG+RA D RL +
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 297 LAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVL 356
L +W + LLKE +KLE L+D L+G + + ++ A C P RP MS VVR+L
Sbjct: 256 LLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
Query: 357 D 357
+
Sbjct: 315 E 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 179/301 (59%), Gaps = 15/301 (4%)
Query: 63 KLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ 122
+L F+L EL++ + NF N+LG GGFG VYKG +L G VAVK L + TQ
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----RLADG---XLVAVKRLKEERTQ 68
Query: 123 GHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP- 180
G + ++ E+ + H +L++L G+C RLLVY YM GS+ + L + P
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 128
Query: 181 -WSTRMKIALGAAKGLAFLHGEDKP-VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE 238
W R +IALG+A+GLA+LH P +I+RD KA+NILLD ++ A + DFGLAK + +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYK 187
Query: 239 ETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQS-- 296
+ HV V G G+ APEY+ TG + +DV+ +GV+LLEL+TG+RA D RL +
Sbjct: 188 DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 297 LAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVL 356
L +W + LLKE +KLE L+D L+G + + ++ A C P RP MS VVR+L
Sbjct: 248 LLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
Query: 357 D 357
+
Sbjct: 307 E 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 177/302 (58%), Gaps = 14/302 (4%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
L +L T+NF L+G G FG VYKG + + K VA+K + +QG +E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-------VALKRRTPESSQGIEEFE 83
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSY--SAALPWSTRMK 186
EI L RHPHLV LIG+C E +L+Y+YM G+L L+ S + ++ W R++
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
I +GAA+GL +LH + +I+RD K+ NILLD ++ K++DFG++K G E ++TH+ V
Sbjct: 144 ICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQ-SLAEWARPLL 305
GT GY PEY + G LT SDVYSFGVVL E+L + A+ + L RE +LAEWA
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS-LPREMVNLAEWAVE-S 259
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
+LE+++DP L + + +K TA KCL+ RP+M V+ L+ Q+S
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
Query: 366 FV 367
+
Sbjct: 320 VI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 176/302 (58%), Gaps = 14/302 (4%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
L +L T+NF L+G G FG VYKG + + K VA+K + +QG +E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-------VALKRRTPESSQGIEEFE 83
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSY--SAALPWSTRMK 186
EI L RHPHLV LIG+C E +L+Y+YM G+L L+ S + ++ W R++
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
I +GAA+GL +LH + +I+RD K+ NILLD ++ K++DFG++K G E +TH+ V
Sbjct: 144 ICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQ-SLAEWARPLL 305
GT GY PEY + G LT SDVYSFGVVL E+L + A+ + L RE +LAEWA
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS-LPREMVNLAEWAVE-S 259
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
+LE+++DP L + + +K TA KCL+ RP+M V+ L+ Q+S
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
Query: 366 FV 367
+
Sbjct: 320 VI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 172/312 (55%), Gaps = 25/312 (8%)
Query: 59 VIGSKLHVFTLAELRLITSNFSR------SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVA 112
V ++ H F+ EL+ +T+NF N +GEGGFG VYKG+V+ VA
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--------TVA 58
Query: 113 VKAL----DLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH 168
VK L D+ + +++ EI + + +H +LV+L+G+ + + LVY YMP GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 169 NQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSD 227
++L + L W R KIA GAA G+ FLH + I+RD K++NILLD +TAK+SD
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISD 176
Query: 228 FGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
FGLA+ + +T + +R++GT Y APE + G +T SD+YSFGVVLLE++TG A+D
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 288 NTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRP 347
R Q L + + E + +E ID ++ + + A +CL RP
Sbjct: 236 EHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRP 292
Query: 348 TMSYVVRVLDSL 359
+ V ++L +
Sbjct: 293 DIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 171/312 (54%), Gaps = 25/312 (8%)
Query: 59 VIGSKLHVFTLAELRLITSNFSR------SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVA 112
V ++ H F+ EL+ +T+NF N +GEGGFG VYKG+V+ VA
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--------TVA 58
Query: 113 VKAL----DLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH 168
VK L D+ + +++ EI + + +H +LV+L+G+ + + LVY YMP GSL
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 169 NQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSD 227
++L + L W R KIA GAA G+ FLH + I+RD K++NILLD +TAK+SD
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISD 176
Query: 228 FGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
FGLA+ + +T + R++GT Y APE + G +T SD+YSFGVVLLE++TG A+D
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 288 NTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRP 347
R Q L + + E + +E ID ++ + + A +CL RP
Sbjct: 236 EHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRP 292
Query: 348 TMSYVVRVLDSL 359
+ V ++L +
Sbjct: 293 DIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 170/312 (54%), Gaps = 25/312 (8%)
Query: 59 VIGSKLHVFTLAELRLITSNFSR------SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVA 112
V ++ H F+ EL+ +T+NF N +GEGGFG VYKG+V+ VA
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--------TVA 52
Query: 113 VKAL----DLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH 168
VK L D+ + +++ EI + + +H +LV+L+G+ + + LVY YMP GSL
Sbjct: 53 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 112
Query: 169 NQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSD 227
++L + L W R KIA GAA G+ FLH + I+RD K++NILLD +TAK+SD
Sbjct: 113 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISD 170
Query: 228 FGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
FGLA+ + + + R++GT Y APE + G +T SD+YSFGVVLLE++TG A+D
Sbjct: 171 FGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
Query: 288 NTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRP 347
R Q L + + E + +E ID ++ + + A +CL RP
Sbjct: 230 EHR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRP 286
Query: 348 TMSYVVRVLDSL 359
+ V ++L +
Sbjct: 287 DIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 140/240 (58%), Gaps = 22/240 (9%)
Query: 62 SKLHVFTLAELRLITSNFSR------SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKA 115
++ H F+ EL+ +T+NF N GEGGFG VYKG+V+ VAVK
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT--------TVAVKK 52
Query: 116 L----DLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL 171
L D+ + +++ EI + +H +LV+L+G+ + + LVY Y P GSL ++L
Sbjct: 53 LAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL 112
Query: 172 -FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL 230
+ L W R KIA GAA G+ FLH + I+RD K++NILLD +TAK+SDFGL
Sbjct: 113 SCLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGL 170
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTR 290
A+ + + +R++GT Y APE + G +T SD+YSFGVVLLE++TG A+D R
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 56/296 (18%)
Query: 85 LGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALDLDGTQGH-------KEWMAEIIFLGQ 136
+G+GGFG V+KG V +K VA+K+L L ++G +E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
L HP++VKL G +V E++P G L+++L + + WS ++++ L A G+
Sbjct: 80 LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIE 136
Query: 197 FLHGEDKPVIYRDFKASNILLDS-----DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
++ ++ P+++RD ++ NI L S AK++DFGL++ + H ++ ++G
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQ 191
Query: 252 YAAPEYVMTGH--LTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL----AEWARPLL 305
+ APE + T +D YSF ++L +LTG+ D G+ + + E RP +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 306 KE--PRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
E P +L +I+ C S P+ RP SY+V+ L L
Sbjct: 252 PEDCPPRLRNVIE--------------------LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 56/296 (18%)
Query: 85 LGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALDLDGTQGH-------KEWMAEIIFLGQ 136
+G+GGFG V+KG V +K VA+K+L L ++G +E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
L HP++VKL G +V E++P G L+++L + + WS ++++ L A G+
Sbjct: 80 LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIE 136
Query: 197 FLHGEDKPVIYRDFKASNILLDS-----DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
++ ++ P+++RD ++ NI L S AK++DFG ++ + H ++ ++G
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQ 191
Query: 252 YAAPEYVMTGH--LTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL----AEWARPLL 305
+ APE + T +D YSF ++L +LTG+ D G+ + + E RP +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 306 KE--PRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
E P +L +I+ C S P+ RP SY+V+ L L
Sbjct: 252 PEDCPPRLRNVIE--------------------LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 29/278 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK--EWMAEIIFLGQLRHPHL 142
+G G FG V++ VAVK L + E++ E+ + +LRHP++
Sbjct: 45 IGAGSFGTVHRA--------EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS-AALPWSTRMKIALGAAKGLAFLHGE 201
V +G + +V EY+ RGSL+ L +S + L R+ +A AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTG 261
+ P+++RD K+ N+L+D YT K+ DFGL++ + GT + APE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 262 HLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEG 321
SDVYSFGV+L EL T ++ N + + + L+ PR L + +EG
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 322 QFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
C ++ P RP+ + ++ +L L
Sbjct: 275 ----------------CWTNEPWKRPSFATIMDLLRPL 296
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 56/296 (18%)
Query: 85 LGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALDLDGTQGH-------KEWMAEIIFLGQ 136
+G+GGFG V+KG V +K VA+K+L L ++G +E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
L HP++VKL G +V E++P G L+++L + + WS ++++ L A G+
Sbjct: 80 LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIE 136
Query: 197 FLHGEDKPVIYRDFKASNILLDS-----DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
++ ++ P+++RD ++ NI L S AK++DF L++ + H ++ ++G
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQ 191
Query: 252 YAAPEYVMTGH--LTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL----AEWARPLL 305
+ APE + T +D YSF ++L +LTG+ D G+ + + E RP +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 306 KE--PRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
E P +L +I+ C S P+ RP SY+V+ L L
Sbjct: 252 PEDCPPRLRNVIE--------------------LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 31/279 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK--EWMAEIIFLGQLRHPHL 142
+G G FG V++ VAVK L + E++ E+ + +LRHP++
Sbjct: 45 IGAGSFGTVHRA--------EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS-AALPWSTRMKIALGAAKGLAFLHGE 201
V +G + +V EY+ RGSL+ L +S + L R+ +A AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR-VMGTQGYAAPEYVMT 260
+ P+++R+ K+ N+L+D YT K+ DFGL++ T + ++ GT + APE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLE 320
SDVYSFGV+L EL T ++ N + + + L+ PR L + +E
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIE 273
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
G C ++ P RP+ + ++ +L L
Sbjct: 274 G----------------CWTNEPWKRPSFATIMDLLRPL 296
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHKEWMAEIIFLGQLRHPHLV 143
LGEG FG V + + G + VAVKAL D G Q W EI L L H H++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 144 KLIGYCWE--EEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
K G C + E+ LV EY+P GSL + L R ++ + + A +G+A+LH +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPEYVM 259
I+R+ A N+LLD+D K+ DFGLAK PEG E + + R G + APE +
Sbjct: 137 H--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV-REDGDSPVFWYAPECLK 193
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
SDV+SFGV L ELLT
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHKEWMAEIIFLGQLRHPHLV 143
LGEG FG V + + G + VAVKAL D G Q W EI L L H H++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 144 KLIGYCWE--EEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
K G C + E+ LV EY+P GSL + L R ++ + + A +G+A+LH +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPEYVM 259
I+R+ A N+LLD+D K+ DFGLAK PEG E + + R G + APE +
Sbjct: 137 H--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV-REDGDSPVFWYAPECLK 193
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
SDV+SFGV L ELLT
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHKEWMAEIIFLGQLRHPHLV 143
LGEG FG V + + G + VAVKAL D G Q W EI L L H H++
Sbjct: 39 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 144 KLIGYCWEE--EYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
K G C + LV EY+P GSL + L R ++ + + A +G+A+LH +
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPEYVM 259
I+RD A N+LLD+D K+ DFGLAK PEG E + + R G + APE +
Sbjct: 154 H--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV-REDGDSPVFWYAPECLK 210
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
SDV+SFGV L ELLT
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGLA+ D PE T
Sbjct: 157 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRA---MDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 53/291 (18%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
++G G FG V K A+ VA+K ++ + + K ++ E+ L ++ HP++V
Sbjct: 16 VVGRGAFGVVCKA--------KWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR---MKIALGAAKGLAFLHG 200
KL G C LV EY GSL+N L + LP+ T M L ++G+A+LH
Sbjct: 66 KLYGACLNP--VCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 201 -EDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
+ K +I+RD K N+LL + T K+ DFG A D +TH +T G+ + APE
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTH-MTNNKGSAAWMAPEVF 176
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWA------RPLLKE-PRKL 311
+ + DV+S+G++L E++T ++ D +G WA PL+K P+ +
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPLIKNLPKPI 234
Query: 312 ERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDF 362
E L+ +C S P RP+M +V+++ L +
Sbjct: 235 ESLMT--------------------RCWSKDPSQRPSMEEIVKIMTHLMRY 265
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 51/314 (16%)
Query: 61 GSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLD 119
GS V A+ L +N S ++G G FG V G +LK P + VA+K L +
Sbjct: 1 GSTQTVHEFAK-ELDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVG 55
Query: 120 GTQGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA 178
T+ + +++ E +GQ HP++++L G + + ++V EYM GSL + R + A
Sbjct: 56 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ 114
Query: 179 LPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGP 235
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D P
Sbjct: 115 FTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 236 EGEETHVITRVMGTQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---A 285
E T T+G + +PE + T+ SDV+S+G+VL E+++ G+R
Sbjct: 173 EAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Query: 286 MDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRH 345
M N + + P + P L +L+ C +
Sbjct: 225 MSNQDVIKAVDEGYRLPPPMDCPAALYQLM--------------------LDCWQKDRNN 264
Query: 346 RPTMSYVVRVLDSL 359
RP +V +LD L
Sbjct: 265 RPKFEQIVSILDKL 278
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 53/291 (18%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
++G G FG V K A+ VA+K ++ + + K ++ E+ L ++ HP++V
Sbjct: 15 VVGRGAFGVVCKA--------KWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR---MKIALGAAKGLAFLHG 200
KL G C LV EY GSL+N L + LP+ T M L ++G+A+LH
Sbjct: 65 KLYGACLNP--VCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 201 -EDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
+ K +I+RD K N+LL + T K+ DFG A D +TH +T G+ + APE
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTH-MTNNKGSAAWMAPEVF 175
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWA------RPLLKE-PRKL 311
+ + DV+S+G++L E++T ++ D +G WA PL+K P+ +
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 312 ERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDF 362
E L+ +C S P RP+M +V+++ L +
Sbjct: 234 ESLMT--------------------RCWSKDPSQRPSMEEIVKIMTHLMRY 264
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 157 ASGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 51/314 (16%)
Query: 61 GSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLD 119
GS V A+ L +N S ++G G FG V G +LK P + VA+K L +
Sbjct: 18 GSTQTVHEFAK-ELDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVG 72
Query: 120 GTQGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA 178
T+ + +++ E +GQ HP++++L G + + ++V EYM GSL + R + A
Sbjct: 73 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ 131
Query: 179 LPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGP 235
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D P
Sbjct: 132 FTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 236 EGEETHVITRVMGTQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---A 285
E T T+G + +PE + T+ SDV+S+G+VL E+++ G+R
Sbjct: 190 EAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 241
Query: 286 MDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRH 345
M N + + P + P L +L+ C +
Sbjct: 242 MSNQDVIKAVDEGYRLPPPMDCPAALYQLM--------------------LDCWQKDRNN 281
Query: 346 RPTMSYVVRVLDSL 359
RP +V +LD L
Sbjct: 282 RPKFEQIVSILDKL 295
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 114/213 (53%), Gaps = 12/213 (5%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLG 135
S +R ++G G FG VYKG + K G + PVA+K L T+ + +++ E +G
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGML--KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMG 101
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
Q H ++++L G + + +++ EYM G+L ++ R + + G A G+
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMGTQGY 252
+L + ++RD A NIL++S+ K+SDFGL++ D PE T ++ +
Sbjct: 161 KYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRW 216
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR 284
APE + T+ SDV+SFG+V+ E++T G+R
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 157 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 157 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 157 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 157 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 95
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 154
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 155 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 204
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 265 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 304
Query: 359 L 359
L
Sbjct: 305 L 305
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL----DLDGTQGHKEWMAEII 132
+ + ++G GGFG VY+ F VAVKA D D +Q + E
Sbjct: 7 AELTLEEIIGIGGFGKVYRAF--------WIGDEVAVKAARHDPDEDISQTIENVRQEAK 58
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
L+HP+++ L G C +E LV E+ G L+ L +P + A+ A
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIA 115
Query: 193 KGLAFLHGED-KPVIYRDFKASNILLD--------SDYTAKLSDFGLAKDGPEGEETHVI 243
+G+ +LH E P+I+RD K+SNIL+ S+ K++DFGLA+ E H
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRT 169
Query: 244 TRVMGTQGYA--APEYVMTGHLTTMSDVYSFGVVLLELLTGK---RAMDNTRLGREQSLA 298
T++ YA APE + + SDV+S+GV+L ELLTG+ R +D + ++
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN 229
Query: 299 EWARPL 304
+ A P+
Sbjct: 230 KLALPI 235
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V EYM GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL + D PE T
Sbjct: 157 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LGEG FG V + + G + VAVKAL + G Q W EI L L H H+V
Sbjct: 17 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 144 KLIGYCWE--EEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
K G C + E+ LV EY+P GSL + L R + + + A +G+A+LH +
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH---CVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPEYVM 259
I+R A N+LLD+D K+ DFGLAK PEG E + + R G + APE +
Sbjct: 132 H--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV-REDGDSPVFWYAPECLK 188
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
SDV+SFGV L ELLT
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LGEG FG V + + G + VAVKAL + G Q W EI L L H H+V
Sbjct: 16 LGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 144 KLIGYCWE--EEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
K G C + E+ LV EY+P GSL + L R + + + A +G+A+LH +
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH---CVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPEYVM 259
I+R A N+LLD+D K+ DFGLAK PEG E + + R G + APE +
Sbjct: 131 H--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV-REDGDSPVFWYAPECLK 187
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
SDV+SFGV L ELLT
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 51/314 (16%)
Query: 61 GSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLD 119
GS V A+ L +N S ++G G FG V G +LK P + VA+K L +
Sbjct: 1 GSTQTVHEFAK-ELDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVG 55
Query: 120 GTQGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA 178
T+ + +++ E +GQ HP++++L G + + ++V E M GSL + R + A
Sbjct: 56 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQ 114
Query: 179 LPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGP 235
+ + G A G+ +L D ++RD A NIL++S+ K+SDFGL++ D P
Sbjct: 115 FTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 236 EGEETHVITRVMGTQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---A 285
E T T+G + +PE + T+ SDV+S+G+VL E+++ G+R
Sbjct: 173 EAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Query: 286 MDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRH 345
M N + + P + P L +L+ C +
Sbjct: 225 MSNQDVIKAVDEGYRLPPPMDCPAALYQLM--------------------LDCWQKDRNN 264
Query: 346 RPTMSYVVRVLDSL 359
RP +V +LD L
Sbjct: 265 RPKFEQIVSILDKL 278
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 67 FTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE 126
+ EL+L+ + +G+G FG V G VAVK + D T +
Sbjct: 3 LNMKELKLLQT-------IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QA 45
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
++AE + QLRH +LV+L+G EE+ L +V EYM +GSL + L + L +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K +L + + +L G + ++RD A N+L+ D AK+SDFGL K+ ++T +
Sbjct: 106 KFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-- 161
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRA 285
+ APE + +T SDV+SFG++L E+ + R
Sbjct: 162 ---PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V E M GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 157 ASGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 67 FTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE 126
+ EL+L+ + +G+G FG V G VAVK + D T +
Sbjct: 9 LNMKELKLLQT-------IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QA 51
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
++AE + QLRH +LV+L+G EE+ L +V EYM +GSL + L + L +
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K +L + + +L G + ++RD A N+L+ D AK+SDFGL K+ ++T +
Sbjct: 112 KFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-- 167
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRA 285
+ APE + +T SDV+SFG++L E+ + R
Sbjct: 168 ---PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 129/280 (46%), Gaps = 36/280 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ ++ K VAVK + G+ + ++AE + L+H LVK
Sbjct: 23 LGAGQFGEVWMATYNKHTK-------VAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ E+M +GSL + L + P + + A+G+AF+ E +
Sbjct: 75 LHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRN 131
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGSFT 190
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEP---RKLERLID-PRLE 320
SDV+SFG++L+E++T R P + P R LER PR
Sbjct: 191 IKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVIRALERGYRMPR-- 233
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQ 360
P ++ +C + P RPT Y+ VLD +
Sbjct: 234 ---PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 67 FTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE 126
+ EL+L+ + +G+G FG V G VAVK + D T +
Sbjct: 18 LNMKELKLLQT-------IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QA 60
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
++AE + QLRH +LV+L+G EE+ L +V EYM +GSL + L + L +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K +L + + +L G + ++RD A N+L+ D AK+SDFGL K+ ++T +
Sbjct: 121 KFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-- 176
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRA 285
+ APE + +T SDV+SFG++L E+ + R
Sbjct: 177 ---PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 67 FTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE 126
+ EL+L+ + +G+G FG V G VAVK + D T +
Sbjct: 190 LNMKELKLLQT-------IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QA 232
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
++AE + QLRH +LV+L+G EE+ L +V EYM +GSL + L + L +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K +L + + +L G + ++RD A N+L+ D AK+SDFGL K+ ++T +
Sbjct: 293 KFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-- 348
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRA 285
+ APE + +T SDV+SFG++L E+ + R
Sbjct: 349 ---PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 50/301 (16%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L +N S ++G G FG V G +LK P + VA+K L + T+ + +++ E
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++++L G + + ++V E M GSL + R + A + + G
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T
Sbjct: 157 ASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-------- 206
Query: 249 TQG------YAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLA 298
T+G + +PE + T+ SDV+S+G+VL E+++ G+R M N + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 299 EWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDS 358
P + P L +L+ C +RP +V +LD
Sbjct: 267 YRLPPPMDCPAALYQLM--------------------LDCWQKDRNNRPKFEQIVSILDK 306
Query: 359 L 359
L
Sbjct: 307 L 307
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 36/279 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ ++ K VAVK + G+ + ++AE + L+H LVK
Sbjct: 196 LGAGQFGEVWMATYNKHTK-------VAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ E+M +GSL + L + P + + A+G+AF+ E +
Sbjct: 248 LHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRN 304
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGSFT 363
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEP---RKLERLID-PRLE 320
SDV+SFG++L+E++T R P + P R LER PR
Sbjct: 364 IKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVIRALERGYRMPR-- 406
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
P ++ +C + P RPT Y+ VLD
Sbjct: 407 ---PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 138/292 (47%), Gaps = 43/292 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 30 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 82 LYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 138
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFT 197
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 253
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFVGPF 370
L C P RPT Y+ V L+DF + G F
Sbjct: 254 L------------------CWKERPEDRPTFDYLRSV---LEDFFTATEGQF 284
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 84 LLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPH 141
++G G G V G +L+ PG PVA+KAL T+ + ++++E +GQ HP+
Sbjct: 56 IIGSGDSGEVCYG----RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
+++L G ++V EYM GSL + R++ + + G G+ +L
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYL--S 168
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMGTQGYAAPEYV 258
D ++RD A N+L+DS+ K+SDFGL++ D P+ T ++ + APE +
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAI 226
Query: 259 MTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDP 317
++ SDV+SFGVV+ E+L G+R N R ++ + RL
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT----------NRDVISSVEEGYRL--- 273
Query: 318 RLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
P+ C RP S +V VLD+L
Sbjct: 274 ----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 79 LYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 135
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFT 194
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 250
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
L C P RPT Y+ VL+
Sbjct: 251 L------------------CWKERPEDRPTFDYLRSVLEDF 273
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 29 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 81 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 137
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFT 196
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 252
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
L C P RPT Y+ VL+
Sbjct: 253 L------------------CWKERPEDRPTFDYLRSVLEDF 275
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 73 LYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFT 188
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFP 324
SDV+SFG++L E++T R P + P ++ L + P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNL-ERGYRMVRP 232
Query: 325 IKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
++ C P RPT Y+ VL+
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 22 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 74 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 130
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFT 189
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFP 324
SDV+SFG++L E++T R P + P ++ L + P
Sbjct: 190 IKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNL-ERGYRMVRP 233
Query: 325 IKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
++ C P RPT Y+ VL+
Sbjct: 234 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 268
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 23 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 75 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 131
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFT 190
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFP 324
SDV+SFG++L E++T R P + P ++ L + P
Sbjct: 191 IKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNL-ERGYRMVRP 234
Query: 325 IKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
++ C P RPT Y+ VL+
Sbjct: 235 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 269
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFT 188
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFP 324
SDV+SFG++L E++T R P + P ++ L + P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNL-ERGYRMVRP 232
Query: 325 IKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
++ C P RPT Y+ VL+
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 126/279 (45%), Gaps = 46/279 (16%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ ++ K VAVK + G+ + ++AE + L+H LVK
Sbjct: 190 LGAGQFGEVWMATYNKHTK-------VAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ E+M +GSL + L + P + + A+G+AF+ E +
Sbjct: 242 LHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRN 298
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ G + + APE + G T
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFT 347
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEP---RKLERLID-PRLE 320
SDV+SFG++L+E++T R P + P R LER PR
Sbjct: 348 IKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVIRALERGYRMPR-- 390
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
P ++ +C + P RPT Y+ VLD
Sbjct: 391 ---PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LGEG FG V+ L P + VAVKAL +++ E L L+H H+V+
Sbjct: 26 LGEGAFGKVFLAEC-HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS--------------AALPWSTRMKIALG 190
G C E L+V+EYM G L N+ RS+ L + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
A G+ +L G ++RD N L+ K+ DFG+++D + V R M
Sbjct: 144 VAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---------AMDNTRLGRE 294
+ PE ++ TT SDV+SFGVVL E+ T GK+ A+D GRE
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 255
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 16 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 68 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 124
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFT 183
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 239
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
L C P RPT Y+ VL+
Sbjct: 240 L------------------CWKERPEDRPTFDYLRSVLEDF 262
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 84 LLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPH 141
++G G G V G +L+ PG PVA+KAL T+ + ++++E +GQ HP+
Sbjct: 56 IIGSGDSGEVCYG----RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
+++L G ++V EYM GSL + R++ + + G G+ +L
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYL--S 168
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMGTQGYAAPEYV 258
D ++RD A N+L+DS+ K+SDFGL++ D P+ T ++ + APE +
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRWTAPEAI 226
Query: 259 MTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDP 317
++ SDV+SFGVV+ E+L G+R N R ++ + RL
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT----------NRDVISSVEEGYRL--- 273
Query: 318 RLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
P+ C RP S +V VLD+L
Sbjct: 274 ----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 47/296 (15%)
Query: 85 LGEGGFGPVYKGFVDE--KLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHL 142
LGEG FG V F+ E L P + VAVKAL K++ E L L+H H+
Sbjct: 23 LGEGAFGKV---FLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS---------------AALPWSTRMKI 187
VK G C + + ++V+EYM G L N+ R++ L S + I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
A A G+ +L + ++RD N L+ ++ K+ DFG+++D + V M
Sbjct: 139 ASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---AMDNTRLGREQSLAEWARP 303
+ PE +M TT SDV+SFGV+L E+ T GK+ + NT +
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE---------- 246
Query: 304 LLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
+ + R LER PR+ ++ C P+ R + + ++L +L
Sbjct: 247 CITQGRVLER---PRV-------CPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALD-LDGTQGHKE 126
A+LR++ + R +LG G FG VYKG +V E + PVA+K L+ G + + E
Sbjct: 7 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKI---PVAIKILNETTGPKANVE 63
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+M E + + + HPHLV+L+G C + LV + MP G L + + + +
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL-EYVHEHKDNIGSQLLLN 121
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+ +L E++ +++RD A N+L+ S K++DFGLA+ E+ +
Sbjct: 122 WCVQIAKGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 179
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ A E + T SDV+S+GV + EL+T
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 79 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 135
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFT 194
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 250
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
L C P RPT Y+ VL+
Sbjct: 251 L------------------CWKERPEDRPTFDYLRSVLEDF 273
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALD-LDGTQGHKE 126
A+LR++ + R +LG G FG VYKG +V E + PVA+K L+ G + + E
Sbjct: 30 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKI---PVAIKILNETTGPKANVE 86
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+M E + + + HPHLV+L+G C + LV + MP G L + + + +
Sbjct: 87 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL-EYVHEHKDNIGSQLLLN 144
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+ +L E++ +++RD A N+L+ S K++DFGLA+ E+ +
Sbjct: 145 WCVQIAKGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 202
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ A E + T SDV+S+GV + EL+T
Sbjct: 203 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LGEG FG V+ L P + VAVKAL +++ E L L+H H+V+
Sbjct: 20 LGEGAFGKVFLAEC-HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS--------------AALPWSTRMKIALG 190
G C E L+V+EYM G L N+ RS+ L + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
A G+ +L G ++RD N L+ K+ DFG+++D + V R M
Sbjct: 138 VAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---------AMDNTRLGRE 294
+ PE ++ TT SDV+SFGVVL E+ T GK+ A+D GRE
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 249
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 31 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 83 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 139
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFT 198
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 254
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
L C P RPT Y+ VL+
Sbjct: 255 L------------------CWKERPEDRPTFDYLRSVLEDF 277
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LGEG FG V+ L P + VAVKAL +++ E L L+H H+V+
Sbjct: 49 LGEGAFGKVFLAEC-HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS--------------AALPWSTRMKIALG 190
G C E L+V+EYM G L N+ RS+ L + +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
A G+ +L G ++RD N L+ K+ DFG+++D + V R M
Sbjct: 167 VAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR---------AMDNTRLGRE 294
+ PE ++ TT SDV+SFGVVL E+ T GK+ A+D GRE
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 278
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFT 188
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFP 324
SDV+SFG++L E++T R P + P ++ L + P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNL-ERGYRMVRP 232
Query: 325 IKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
++ C P RPT Y+ VL+
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 26 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 78 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFT 193
Query: 265 TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFP 324
SDV+SFG++L E++T R P + P ++ L + P
Sbjct: 194 IKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNL-ERGYRMVRP 237
Query: 325 IKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
++ C P RPT Y+ VL+
Sbjct: 238 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 272
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 36/279 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V+ G+ L VA+K + +G ++++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G C E+ LV+E+M G L + L R+ T + + L +G+A+L E+
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAS 123
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVMTG 261
VI+RD A N L+ + K+SDFG+ + + + T GT+ +A+PE
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFS 179
Query: 262 HLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLE 320
++ SDV+SFGV++ E+ + GK +N R S ++++ RL PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS------EVVEDISTGFRLYKPRL- 228
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
+ C P RP S ++R L ++
Sbjct: 229 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V+ G+ L VA+K + +G ++++ E + +L HP LV+
Sbjct: 13 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G C E+ LV+E+M G L + L R+ T + + L +G+A+L E+
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 121
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVMTG 261
VI+RD A N L+ + K+SDFG+ + + + T GT+ +A+PE
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFS 177
Query: 262 HLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLE 320
++ SDV+SFGV++ E+ + GK +N R S ++++ RL PRL
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS------EVVEDISTGFRLYKPRL- 226
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
+ C P RP S ++R L + +
Sbjct: 227 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V+ G+ L VA+K + +G ++++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G C E+ LV+E+M G L + L R+ T + + L +G+A+L E+
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 123
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVMTG 261
VI+RD A N L+ + K+SDFG+ + + + T GT+ +A+PE
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFS 179
Query: 262 HLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLE 320
++ SDV+SFGV++ E+ + GK +N R S ++++ RL PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS------EVVEDISTGFRLYKPRL- 228
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
+ C P RP S ++R L + +
Sbjct: 229 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V+ G+ L VA+K + +G+ +++ E + +L HP LV+
Sbjct: 35 IGSGQFGLVHLGY-------WLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G C E+ LV+E+M G L + L R+ T + + L +G+A+L E+
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 143
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVMTG 261
VI+RD A N L+ + K+SDFG+ + + + T GT+ +A+PE
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFS 199
Query: 262 HLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLE 320
++ SDV+SFGV++ E+ + GK +N R S ++++ RL PRL
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS------EVVEDISTGFRLYKPRL- 248
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
+ C P RP S ++R L + +
Sbjct: 249 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V+ G+ L VA+K + +G ++++ E + +L HP LV+
Sbjct: 18 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G C E+ LV+E+M G L + L R+ T + + L +G+A+L E+
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 126
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVMTG 261
VI+RD A N L+ + K+SDFG+ + + + T GT+ +A+PE
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFS 182
Query: 262 HLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLE 320
++ SDV+SFGV++ E+ + GK +N R S ++++ RL PRL
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS------EVVEDISTGFRLYKPRL- 231
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
+ C P RP S ++R L + +
Sbjct: 232 ------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ FL
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E + H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ FL
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E + H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ FL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ FL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL- 147
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E + H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ FL
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL- 154
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E + H T + A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ FL
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E + H T + A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ FL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 17 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 69 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 125
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+R+ +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFT 184
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 240
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
L C P RPT Y+ VL+
Sbjct: 241 L------------------CWKERPEDRPTFDYLRSVLEDF 263
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 85 LGEGGFGPVYKGFVDE--KLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHL 142
LGEG FG V F+ E L P + VAVK L K++ E L L+H H+
Sbjct: 21 LGEGAFGKV---FLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS------------AALPWSTRMKIALG 190
VK G C E + ++V+EYM G L N+ R++ L S + IA
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
A G+ +L + ++RD N L+ + K+ DFG+++D + V M
Sbjct: 137 IAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE +M TT SDV+S GVVL E+ T
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 82 SNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQLRH 139
+ +LGEG FG VY+G + + K E VAVK D T +KE +M+E + + L H
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKG----EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
PH+VKLIG EEE ++ E P G L + L R+ +L T + +L K +A+L
Sbjct: 69 PHIVKLIGII-EEEPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL- 125
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
E ++RD NIL+ S KL DFGL++ E E+ + + + +PE +
Sbjct: 126 -ESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
TT SDV+ F V + E+L+
Sbjct: 184 FRRFTTASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 82 SNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQLRH 139
+ +LGEG FG VY+G + + K E VAVK D T +KE +M+E + + L H
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKG----EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
PH+VKLIG EEE ++ E P G L + L R+ +L T + +L K +A+L
Sbjct: 85 PHIVKLIGII-EEEPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL- 141
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
E ++RD NIL+ S KL DFGL++ E E+ + + + +PE +
Sbjct: 142 -ESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
TT SDV+ F V + E+L+
Sbjct: 200 FRRFTTASDVWMFAVCMWEILS 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 34/276 (12%)
Query: 49 PLSADDLSNSVIGSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFV---DEKLKPG 105
PL + +N V+ +F ELR + +LG G FG V+KG E +K
Sbjct: 13 PLDPSEKANKVLA---RIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIK-- 60
Query: 106 LEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPR 164
PV +K + D G Q + ++ +G L H H+V+L+G C +L V +Y+P
Sbjct: 61 ---IPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPL 116
Query: 165 GSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAK 224
GSL + + R + AL + + AKG+ +L E+ +++R+ A N+LL S +
Sbjct: 117 GSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQ 173
Query: 225 LSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GK 283
++DFG+A P ++ + + + A E + G T SDV+S+GV + EL+T G
Sbjct: 174 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 233
Query: 284 RAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
RL L E K ERL P++
Sbjct: 234 EPYAGLRLAEVPDLLE----------KGERLAQPQI 259
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 15/215 (6%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEIIF 133
S + ++G G FG V G +LK PG PVA+K L + T+ + +++ E
Sbjct: 21 ASCITIERVIGAGEFGEVCSG----RLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+GQ HP+++ L G + + ++V EYM GSL + + + + G +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISA 135
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMGTQ 250
G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T ++
Sbjct: 136 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PI 191
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR 284
+ APE + T+ SDV+S+G+V+ E+++ G+R
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 82 SNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQLRH 139
+ +LGEG FG VY+G + + K E VAVK D T +KE +M+E + + L H
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKG----EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
PH+VKLIG EEE ++ E P G L + L R+ +L T + +L K +A+L
Sbjct: 73 PHIVKLIGII-EEEPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL- 129
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
E ++RD NIL+ S KL DFGL++ E E+ + + + +PE +
Sbjct: 130 -ESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
TT SDV+ F V + E+L+
Sbjct: 188 FRRFTTASDVWMFAVCMWEILS 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D E H T + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G G V+ G+ + K VAVK+L G+ ++AE + QL+H LV+
Sbjct: 21 LGAGQAGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +E ++ EYM GSL + L L + + +A A+G+AF+ E++
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+NIL+ + K++DFGLA+ + E T + + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAINYGTFT 188
Query: 265 TMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKE--PRKLERLIDPR 318
SDV+SFG++L E++T R M N + Q+L R + + P +L +L+ R
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI--QNLERGYRMVRPDNCPEELYQLM--R 244
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
L C P RPT Y+ VL+
Sbjct: 245 L------------------CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 67
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 125
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 126 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 184 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 242
Query: 305 LKEP 308
+ P
Sbjct: 243 PQPP 246
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 128/283 (45%), Gaps = 48/283 (16%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G + K VA+K L GT + ++ E + +L+H LV+
Sbjct: 17 LGNGQFGEVWMGTWNGNTK-------VAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L AL + +A A G+A++ E
Sbjct: 69 LYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI--ERMN 125
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
I+RD +++NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXT-------ARQGAKFPIKWTAPEAA 178
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKR----AMDNTRLGREQSLAEWARPLLKEPRKLERL 314
+ G T SDV+SFG++L EL+T R M+N R +L++ + R+
Sbjct: 179 LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-------------REVLEQVERGYRM 225
Query: 315 IDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P+ PI + C P RPT Y+ L+
Sbjct: 226 PCPQ---DCPISLHE----LMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 36/281 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V+ G+ L VA+K + +G ++++ E + +L HP LV+
Sbjct: 16 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G C E+ LV E+M G L + L R+ T + + L +G+A+L E+
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 124
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVMTG 261
VI+RD A N L+ + K+SDFG+ + + + T GT+ +A+PE
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFS 180
Query: 262 HLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLE 320
++ SDV+SFGV++ E+ + GK +N R S ++++ RL PRL
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS------EVVEDISTGFRLYKPRL- 229
Query: 321 GQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
+ C P RP S ++R L + +
Sbjct: 230 ------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 64
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 122
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 123 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 181 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 239
Query: 305 LKEP 308
+ P
Sbjct: 240 PQPP 243
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 63
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 122 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 305 LKEP 308
+ P
Sbjct: 239 PQPP 242
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 13 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 69
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 70 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 127
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 128 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 186 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 244
Query: 305 LKEP 308
+ P
Sbjct: 245 PQPP 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 17 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 73
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 74 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 131
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 132 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 190 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 248
Query: 305 LKEP 308
+ P
Sbjct: 249 PQPP 252
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 28/245 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + +V ++ SL++ L S + IA A+G+ +LH
Sbjct: 83 LLFMGYSTKPQL-AIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHA-- 138
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM--- 259
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 260 TGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWAR----PLLKE-----PRK 310
+ + SDVY+FG+VL EL+TG+ N R+Q + R P L + P++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 311 LERLI 315
++RL+
Sbjct: 258 MKRLM 262
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 65
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 124 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 305 LKEP 308
+ P
Sbjct: 241 PQPP 244
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 66
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 125 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 241
Query: 305 LKEP 308
+ P
Sbjct: 242 PQPP 245
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 65
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 124 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 305 LKEP 308
+ P
Sbjct: 241 PQPP 244
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 66
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 125 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 241
Query: 305 LKEP 308
+ P
Sbjct: 242 PQPP 245
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 64
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYV-REHKDNIGSQYLLN 122
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 123 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 181 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 239
Query: 305 LKEP 308
+ P
Sbjct: 240 PQPP 243
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 70
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 129 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 245
Query: 305 LKEP 308
+ P
Sbjct: 246 PQPP 249
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LGEG +G VYK E Q VA+K + ++ +E + EI + Q PH+VK
Sbjct: 37 LGEGSYGSVYKAIHKET------GQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
G ++ +V EY GS+ + + R + L I KGL +LH K
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK- 146
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAAPEYVMTG 261
I+RD KA NILL+++ AKL+DFG+A G+ T + + V+GT + APE +
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 262 HLTTMSDVYSFGVVLLELLTGK 283
++D++S G+ +E+ GK
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 32 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 88
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 89 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 146
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 147 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 205 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 263
Query: 305 LKEP 308
+ P
Sbjct: 264 PQPP 267
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 66
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 125 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 241
Query: 305 LKEP 308
+ P
Sbjct: 242 PQPP 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 63
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 122 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 305 LKEP 308
+ P
Sbjct: 239 PQPP 242
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 66
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 124
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 125 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 183 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 241
Query: 305 LKEP 308
+ P
Sbjct: 242 PQPP 245
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 63
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 122 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 305 LKEP 308
+ P
Sbjct: 239 PQPP 242
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 1 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 57
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 58 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 115
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 116 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 174 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 232
Query: 305 LKEP 308
+ P
Sbjct: 233 PQPP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 147
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 146
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQLRHP 140
+ ++G G FG VY G + + + AVK+L+ G +++ E I + HP
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 141 HLVKLIGYCWEEEYR-LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ L+G C E L+V YM G L N R+ + + L AKG+ +L
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL- 144
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE--ETHVITRVMGTQGYAAPEY 257
K ++RD A N +LD +T K++DFGLA+D + E H T + A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ T TT SDV+SFGV+L EL+T
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S V+ E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 62
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL- 179
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEME 121
Query: 180 --------PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 180 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 63
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYV-REHKDNIGSQYLLN 121
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 122 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 305 LKEP 308
+ P
Sbjct: 239 PQPP 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 28/245 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + +V ++ SL++ L S + IA A+G+ +LH
Sbjct: 83 LLFMGYSTAPQL-AIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHA-- 138
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM--- 259
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 260 TGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWAR----PLLKE-----PRK 310
+ + SDVY+FG+VL EL+TG+ N R+Q + R P L + P++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 311 LERLI 315
++RL+
Sbjct: 258 MKRLM 262
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S V+ E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 68
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP 180
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS A+
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPAMA 127
Query: 181 ---------WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++RD A N ++ D+T K+ DFG+ +D E + + + + AP
Sbjct: 141 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 243
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P+ RPT +V +L D SF
Sbjct: 244 DGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD--DLHPSF 291
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++RD A N ++ D+T K+ DFG+ +D E + + + + AP
Sbjct: 144 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P+ RPT +V +L D SF
Sbjct: 247 DGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD--DLHPSF 294
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 15/217 (6%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEI 131
L S ++G G FG V G +LK PG VA+K L + T+ + +++ E
Sbjct: 40 LDASCIKIERVIGAGEFGEVCSG----RLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+GQ HP++V L G + ++V E+M G+L + R + + + G
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGI 154
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMG 248
A G+ +L D ++RD A NIL++S+ K+SDFGL++ D PE T ++
Sbjct: 155 AAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI-- 210
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKR 284
+ APE + T+ SDV+S+G+V+ E+++ G+R
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 247
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 127/246 (51%), Gaps = 13/246 (5%)
Query: 68 TLAELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGH 124
+A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +
Sbjct: 2 AMALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKAN 58
Query: 125 KEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR 184
KE + E + + +PH+ +L+G C +L+ + MP G L + + R + +
Sbjct: 59 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYL 116
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVI 243
+ + A+G+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 117 LNWCVQIAEGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWAR 302
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E
Sbjct: 175 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 233
Query: 303 PLLKEP 308
L + P
Sbjct: 234 RLPQPP 239
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 66 VFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK 125
V+ E + + S LG+G FG VY+G +K E + VA+K ++ + +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRER 62
Query: 126 -EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP---- 180
E++ E + + H+V+L+G + + L++ E M RG L + L RS A+
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPAMANNPV 121
Query: 181 -----WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP 235
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+ +D
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 236 EGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S VF E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 1 SAADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 59
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL- 179
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 60 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEME 118
Query: 180 --------PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 119 NNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT 176
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 177 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++RD A N ++ D+T K+ DFG+ +D E + + + + AP
Sbjct: 144 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P RPT +V +L D SF
Sbjct: 247 DGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD--DLHPSF 294
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 28/245 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 20 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 70
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + +V ++ SL++ L S + IA A+G+ +LH
Sbjct: 71 LLFMGYSTKPQL-AIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHA-- 126
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM--- 259
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 260 TGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWAR----PLLKE-----PRK 310
+ + SDVY+FG+VL EL+TG+ N R+Q + R P L + P++
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKR 245
Query: 311 LERLI 315
++RL+
Sbjct: 246 MKRLM 250
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 31/259 (11%)
Query: 66 VFTLAELRLITSNFSRSNLLGEGGFGPVYKGFV---DEKLKPGLEAQPVAVKAL-DLDGT 121
+F ELR + +LG G FG V+KG E +K PV +K + D G
Sbjct: 9 IFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIK-----IPVCIKVIEDKSGR 56
Query: 122 QGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW 181
Q + ++ +G L H H+V+L+G C +L V +Y+P GSL + + R + AL
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHV-RQHRGALGP 114
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETH 241
+ + AKG+ +L E+ +++R+ A N+LL S +++DFG+A P ++
Sbjct: 115 QLLLNWGVQIAKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEW 300
+ + + A E + G T SDV+S+GV + EL+T G RL L E
Sbjct: 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE- 231
Query: 301 ARPLLKEPRKLERLIDPRL 319
K ERL P++
Sbjct: 232 ---------KGERLAQPQI 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 67
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 125
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFG AK G E +E H
Sbjct: 126 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 184 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 242
Query: 305 LKEP 308
+ P
Sbjct: 243 PQPP 246
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 34/284 (11%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHL 142
++G G FG V G + KL PG VA+K L T+ + ++++E +GQ HP++
Sbjct: 40 VIGAGEFGEVCSGHL--KL-PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ L G + +++ E+M GSL + R + + G A G+ +L D
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL--AD 153
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVM 259
++RD A NIL++S+ K+SDFGL++ + T +G + + APE +
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 260 TGHLTTMSDVYSFGVVLLELLT-GKRAM-DNTRLGREQSLAEWAR--PLLKEPRKLERLI 315
T+ SDV+S+G+V+ E+++ G+R D T ++ + R P + P L +L+
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 273
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
C HRP +V LD +
Sbjct: 274 --------------------LDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK L GT + ++ E + L+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE ++ EYM +GSL + L + + + A+G+A++ E K
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI--ERKN 130
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+N+L+ K++DFGLA+ + E T + + APE + G T
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGCFT 189
Query: 265 TMSDVYSFGVVLLELLT 281
SDV+SFG++L E++T
Sbjct: 190 IKSDVWSFGILLYEIVT 206
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 71 ELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMA 129
E + + S LG+G FG VY+G +K E + VA+K ++ + + E++
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLN 62
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL---------P 180
E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 121
Query: 181 WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+ +D E +
Sbjct: 122 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 241 HVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 65
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFG AK G E +E H
Sbjct: 124 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 305 LKEP 308
+ P
Sbjct: 241 PQPP 244
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +L G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 70
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 129 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 245
Query: 305 LKEP 308
+ P
Sbjct: 246 PQPP 249
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +L G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 7 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 63
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 122 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 305 LKEP 308
+ P
Sbjct: 239 PQPP 242
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 65
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L++ + MP G L + + R + + +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFG AK G E +E H
Sbjct: 124 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 305 LKEP 308
+ P
Sbjct: 241 PQPP 244
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 83 NLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL-RHPH 141
+++GEG FG V K + K GL + + H+++ E+ L +L HP+
Sbjct: 31 DVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRS--------------YSAALPWSTRMKI 187
++ L+G C Y L EY P G+L + L +S ++ L +
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
A A+G+ +L K I+RD A NIL+ +Y AK++DFGL++ G+E +V + M
Sbjct: 148 AADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTM 200
Query: 248 GT--QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
G + A E + TT SDV+S+GV+L E+++ LG L
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LGGTPYCGMTCAELY 251
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
++ + RL + P+ + +C P RP+ + ++ L+ + + + +
Sbjct: 252 EKLPQGYRL-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
Query: 366 FVGPFVY 372
+V +Y
Sbjct: 305 YVNTTLY 311
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 244 LYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 300
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 353
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 400
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 401 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE + V EYM +GSL + L L + +A A G+A++ E
Sbjct: 68 LYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 124
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT-------ARQGAKFPIKWTAPEAA 177
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 224
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 225 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +++ EYM +GSL + L L + +A A G+A++ E
Sbjct: 78 LYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 244 LYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 300
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 353
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 400
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 401 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +L G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 70
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 129 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 245
Query: 305 LKEP 308
+ P
Sbjct: 246 PQPP 249
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 65
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 123
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFG AK G E +E H
Sbjct: 124 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 182 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 305 LKEP 308
+ P
Sbjct: 241 PQPP 244
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 63
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 121
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFG AK G E +E H
Sbjct: 122 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 180 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 305 LKEP 308
+ P
Sbjct: 239 PQPP 242
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 83 NLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL-RHPH 141
+++GEG FG V K + K GL + + H+++ E+ L +L HP+
Sbjct: 21 DVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRS--------------YSAALPWSTRMKI 187
++ L+G C Y L EY P G+L + L +S ++ L +
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
A A+G+ +L K I+RD A NIL+ +Y AK++DFGL++ G+E +V + M
Sbjct: 138 AADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTM 190
Query: 248 GT--QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
G + A E + TT SDV+S+GV+L E+++ LG L
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LGGTPYCGMTCAELY 241
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
++ + RL + P+ + +C P RP+ + ++ L+ + + + +
Sbjct: 242 EKLPQGYRL-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 294
Query: 366 FVGPFVY 372
+V +Y
Sbjct: 295 YVNTTLY 301
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S V+ E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 61
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL- 179
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEME 120
Query: 180 --------PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 327 LYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 383
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 436
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 483
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 484 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S V+ E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 68
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL- 179
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEME 127
Query: 180 --------PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+K L + + +KE
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKE 70
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 128
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFG AK G E +E H
Sbjct: 129 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 187 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 245
Query: 305 LKEP 308
+ P
Sbjct: 246 PQPP 249
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKG-FVDEKLKPGLEAQPVAVKAL-DLDGTQGHKE 126
A LR++ + F + +LG G FG VYKG ++ E K + PVA+ L + + +KE
Sbjct: 41 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIMELREATSPKANKE 97
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + +PH+ +L+G C +L+ + MP G L + + R + + +
Sbjct: 98 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLN 155
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-DGPEGEETHVITR 245
+ AKG+ +L ED+ +++RD A N+L+ + K++DFGLAK G E +E H
Sbjct: 156 WCVQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPL 304
+ + + A E ++ T SDV+S+GV + EL+T G + D S+ E L
Sbjct: 214 KVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 272
Query: 305 LKEP 308
+ P
Sbjct: 273 PQPP 276
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S V+ E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 61
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL- 179
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEME 120
Query: 180 --------PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++RD A N ++ D+T K+ DFG+ +D E + + + + AP
Sbjct: 143 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 245
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P+ RPT +V +L D SF
Sbjct: 246 DGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD--DLHPSF 293
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S V+ E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 62
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL- 179
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEME 121
Query: 180 --------PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 180 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++RD A N ++ D+T K+ DFG+ +D E + + + + AP
Sbjct: 144 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P+ RPT +V +L D SF
Sbjct: 247 DGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD--DLHPSF 294
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 244 LYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 300
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 353
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 400
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 401 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +++ EYM +GSL + L L + +A A G+A++ E
Sbjct: 78 LYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 78 LYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 71 LYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 127
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 180
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 227
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 228 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 84 LLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGT-QGHKEWMAEIIFLGQLRHPH 141
++G G FG V G +LK PG VA+K L T + +++++E +GQ HP+
Sbjct: 36 VIGVGEFGEVCSG----RLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L G + + +++ EYM GSL + R + + G G+ +L
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL--S 148
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMGTQGYAAPEYV 258
D ++RD A NIL++S+ K+SDFG+++ D PE T ++ + APE +
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAI 206
Query: 259 MTGHLTTMSDVYSFGVVLLELLT 281
T+ SDV+S+G+V+ E+++
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 38/297 (12%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
S+ +LG+G FG K E + + +K L + + ++ E+ +
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRET------GEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
L HP+++K IG ++++ + EY+ G+L + +S + PWS R+ A A G+A
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMA 122
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA------KDGPEG------EETHVIT 244
+LH + +I+RD + N L+ + ++DFGLA K PEG +
Sbjct: 123 YLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 245 RVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPL 304
V+G + APE + DV+SFG+VL E++ G+ D L R R
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVRGF 239
Query: 305 LKEPRKLERLIDPRLEGQ-FPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQ 360
L+R P FPI +C P RP+ + L++L+
Sbjct: 240 ------LDRYCPPNCPPSFFPI---------TVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 67 LYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 123
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 176
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 223
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 224 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 62 SKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT 121
S V+ E + + S LG+G FG VY+G +K E + VA+K ++ +
Sbjct: 32 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 90
Query: 122 QGHK-EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL- 179
+ E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 91 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEME 149
Query: 180 --------PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+
Sbjct: 150 NNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT 207
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 208 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 69 LYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 125
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 178
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 225
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 226 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 78 LYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 36 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 86
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + +V ++ SL++ L + IA A+G+ +LH
Sbjct: 87 LLFMGYSTKPQL-AIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 142
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT-- 260
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDN 288
+ SDVY+FG+VL EL+TG+ N
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSN 231
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++RD A N ++ D+T K+ DFG+ +D E + + + AP
Sbjct: 144 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P+ RPT +V +L D SF
Sbjct: 247 DGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD--DLHPSF 294
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 30/278 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KL VAVK + +G+ E+ E + +L HP LVK
Sbjct: 16 LGSGQFGVV-------KLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVK 67
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
G C +E +V EY+ G L N L RS+ L S +++ +G+AFL E
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFL--ESHQ 124
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD A N L+D D K+SDFG+ + + + + + ++APE +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK-WSAPEVFHYFKYS 183
Query: 265 TMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQF 323
+ SDV++FG+++ E+ + GK D L + +LK + RL P L
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYD---------LYTNSEVVLKVSQG-HRLYRPHL---- 229
Query: 324 PIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
+ + C P RPT ++ ++ L++
Sbjct: 230 ---ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 84 LLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGT-QGHKEWMAEIIFLGQLRHPH 141
++G G FG V G +LK PG VA+K L T + +++++E +GQ HP+
Sbjct: 21 VIGVGEFGEVCSG----RLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L G + + +++ EYM GSL + R + + G G+ +L
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL--S 133
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMGTQGYAAPEYV 258
D ++RD A NIL++S+ K+SDFG+++ D PE T ++ + APE +
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAI 191
Query: 259 MTGHLTTMSDVYSFGVVLLELLT 281
T+ SDV+S+G+V+ E+++
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMS 214
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + +V ++ SL++ L + IA A+G+ +LH
Sbjct: 95 LLFMGYSTKPQL-AIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 150
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 263 ---LTTMSDVYSFGVVLLELLTGKRAMDN 288
+ SDVY+FG+VL EL+TG+ N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSN 239
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 84 LLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGT-QGHKEWMAEIIFLGQLRHPH 141
++G G FG V G +LK PG VA+K L T + +++++E +GQ HP+
Sbjct: 15 VIGVGEFGEVCSG----RLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L G + + +++ EYM GSL + R + + G G+ +L
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL--S 127
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAK---DGPEGEETHVITRVMGTQGYAAPEYV 258
D ++RD A NIL++S+ K+SDFG+++ D PE T ++ + APE +
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAI 185
Query: 259 MTGHLTTMSDVYSFGVVLLELLT 281
T+ SDV+S+G+V+ E+++
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + ++RH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 78 LYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 43/307 (14%)
Query: 83 NLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL-RHPH 141
+++GEG FG V K + K GL + + H+++ E+ L +L HP+
Sbjct: 28 DVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 84
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRS--------------YSAALPWSTRMKI 187
++ L+G C Y L EY P G+L + L +S ++ L +
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
A A+G+ +L K I+R+ A NIL+ +Y AK++DFGL++ G+E +V + M
Sbjct: 145 AADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTM 197
Query: 248 GT--QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
G + A E + TT SDV+S+GV+L E+++ LG L
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS---------LGGTPYCGMTCAELY 248
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
++ + RL + P+ + +C P RP+ + ++ L+ + + + +
Sbjct: 249 EKLPQGYRL-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 301
Query: 366 FVGPFVY 372
+V +Y
Sbjct: 302 YVNTTLY 308
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 71 ELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMA 129
E + + S LG+G FG VY+G +K E + VA+K ++ + + E++
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLN 64
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL---------P 180
E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 123
Query: 181 WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
S +++A A G+A+L+ ++RD A N ++ D+T K+ DFG+ +D E +
Sbjct: 124 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 241 HVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 84 LLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPH 141
++G G FG V +G +LK PG + VA+K L T+ + E+++E +GQ HP+
Sbjct: 21 VIGAGEFGEVCRG----RLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
+++L G +++ E+M G+L + R + + G A G+ +L
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGMRYLA-- 133
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYV 258
+ ++RD A NIL++S+ K+SDFGL++ E T +G + + APE +
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 259 MTGHLTTMSDVYSFGVVLLELLT-GKR 284
T+ SD +S+G+V+ E+++ G+R
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + + V ++ SL++ L + IA A+G+ +LH
Sbjct: 67 LLFMGYSTKPQLAI-VTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 122
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT-- 260
K +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDN 288
+ SDVY+FG+VL EL+TG+ N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSN 211
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + ++ A G+A++ E
Sbjct: 75 LYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV--ERMN 131
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 184
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 231
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 232 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + ++ A G+A++ E
Sbjct: 75 LYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV--ERMN 131
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWT-------ARQGAKFPIKWTAPEAA 184
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 231
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 232 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V+ G+ + K VAVK L GT + ++ E + L+H LV+
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L +EE ++ E+M +GSL + L + + + A+G+A++ E K
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI--ERKN 129
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
I+RD +A+N+L+ K++DFGLA+ + E T + + APE + G T
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFGCFT 188
Query: 265 TMSDVYSFGVVLLELLT 281
S+V+SFG++L E++T
Sbjct: 189 IKSNVWSFGILLYEIVT 205
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +G L + L L + +A A G+A++ E
Sbjct: 78 LYAVV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 84 LLGEGGFGPVYKGFVDEKLK-PGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPH 141
++G G FG V +G +LK PG + VA+K L T+ + E+++E +GQ HP+
Sbjct: 23 VIGAGEFGEVCRG----RLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
+++L G +++ E+M G+L + R + + G A G+ +L
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGMRYLA-- 135
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYV 258
+ ++RD A NIL++S+ K+SDFGL++ E T +G + + APE +
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 259 MTGHLTTMSDVYSFGVVLLELLT-GKR 284
T+ SD +S+G+V+ E+++ G+R
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 78 LYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 66 VFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK 125
V+ E + + S LG+G FG VY+G +K E + VA+K ++ + +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRER 59
Query: 126 -EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL----- 179
E++ E + + H+V+L+G + + L++ E M RG L + L RS +
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPV 118
Query: 180 ----PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP 235
S +++A A G+A+L+ ++RD A N + D+T K+ DFG+ +D
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 236 EGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
E + + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L GT + ++ E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +G L + L L + +A A G+A++ E
Sbjct: 78 LYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGLA+ + E T QG + APE
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAA 187
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 234
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 235 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFLGQLRHPH 141
LG+G FG V +G D P + VAVK L L + +++ E+ + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
L++L G ++ V E P GSL ++L R + T + A+ A+G+ +L E
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL--E 132
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ-GYAAPEYVMT 260
K I+RD A N+LL + K+ DFGL + P+ ++ +V+ + APE + T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLA-EWARPLLKEPRKLERLIDPRL 319
+ SD + FGV L E+ T G+E + ++ L K ++ ERL PR
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT---------YGQEPWIGLNGSQILHKIDKEGERL--PR- 240
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVL--------DSLQDFQD 364
P Q +C +H P RPT + L +LQDF++
Sbjct: 241 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEE 289
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 34/284 (11%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHL 142
++G G FG V G + KL PG VA+K L T+ + ++++E +GQ HP++
Sbjct: 14 VIGAGEFGEVCSGHL--KL-PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ L G + +++ E+M GSL + R + + G A G+ +L D
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL--AD 127
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ---GYAAPEYVM 259
++R A NIL++S+ K+SDFGL++ + T +G + + APE +
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 260 TGHLTTMSDVYSFGVVLLELLT-GKRA-MDNTRLGREQSLAEWAR--PLLKEPRKLERLI 315
T+ SDV+S+G+V+ E+++ G+R D T ++ + R P + P L +L+
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 247
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
C HRP +V LD +
Sbjct: 248 --------------------LDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++R+ A N ++ D+T K+ DFG+ +D E + + + + AP
Sbjct: 144 AYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P RPT +V +L D SF
Sbjct: 247 DGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD--DLHPSF 294
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 30/291 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LG+G FG VY+G + +K E + VAVK ++ + + E++ E + H+V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALP------WSTRMKIALGAAKGL 195
+L+G + + L+V E M G L + L R + P +++A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+L+ K ++R+ A N ++ D+T K+ DFG+ +D E + + + + AP
Sbjct: 145 AYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
E + G TT SD++SFGVVL E+ SLAE L + L+ ++
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 247
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
D Q P ++ C +P RPT +V +L D SF
Sbjct: 248 DGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD--DLHPSF 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 112 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 167
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 112 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 167
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 123/299 (41%), Gaps = 45/299 (15%)
Query: 79 FSRSNL-----LGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKE- 126
F R+NL LG G FG V + G D LK VAVK L KE
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEA 87
Query: 127 WMAEIIFLGQL-RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL------ 179
M+E+ + L +H ++V L+G C L++ EY G L N L R A L
Sbjct: 88 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 147
Query: 180 PWSTR--MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG 237
P R + + A+G+AFL K I+RD A N+LL + + AK+ DFGLA+D
Sbjct: 148 PLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
Query: 238 EETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL 297
V + APE + T SDV+S+G++L E+ SL
Sbjct: 206 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF---------------SL 250
Query: 298 AEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVL 356
P + K +L+ + P + + C + P HRPT + L
Sbjct: 251 GLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 8 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 117 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 172
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 114 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 169
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 123/299 (41%), Gaps = 45/299 (15%)
Query: 79 FSRSNL-----LGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKE- 126
F R+NL LG G FG V + G D LK VAVK L KE
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEA 95
Query: 127 WMAEIIFLGQL-RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL------ 179
M+E+ + L +H ++V L+G C L++ EY G L N L R A L
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 180 PWSTR--MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG 237
P R + + A+G+AFL K I+RD A N+LL + + AK+ DFGLA+D
Sbjct: 156 PLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 238 EETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL 297
V + APE + T SDV+S+G++L E+ SL
Sbjct: 214 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF---------------SL 258
Query: 298 AEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVL 356
P + K +L+ + P + + C + P HRPT + L
Sbjct: 259 GLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 120 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 175
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 18 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + + V ++ SL++ L + IA A+G+ +LH
Sbjct: 69 LLFMGYSTKPQLAI-VTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 124
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT-- 260
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDN 288
+ SDVY+FG+VL EL+TG+ N
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSN 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 43 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 93
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + +V ++ SL++ L + IA A+G+ +LH
Sbjct: 94 LLFMGYSTKPQL-AIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 149
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 263 ---LTTMSDVYSFGVVLLELLTGKRAMDN 288
+ SDVY+FG+VL EL+TG+ N
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSN 238
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + +V ++ SL++ L + IA A+G+ +LH
Sbjct: 95 LLFMGYSTKPQL-AIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 150
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 263 ---LTTMSDVYSFGVVLLELLTGKRAMDN 288
+ SDVY+FG+VL EL+TG+ N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSN 239
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + + V ++ SL++ L + IA A+G+ +LH
Sbjct: 72 LLFMGYSTKPQLAI-VTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 127
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT-- 260
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKE---------PRK 310
+ SDVY+FG+VL EL+TG+ N R+Q + R L P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRSNCPKA 246
Query: 311 LERLI 315
++RL+
Sbjct: 247 MKRLM 251
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 40/279 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG V+ G + + VA+K L G + ++ E + +LRH LV+
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L EE +V EYM +GSL + L L + +A A G+A++ E
Sbjct: 245 LYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 301
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG------YAAPEYV 258
++RD +A+NIL+ + K++DFGL + + E T QG + APE
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT-------ARQGAKFPIKWTAPEAA 354
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
+ G T SDV+SFG++L EL T R + RE +L + + R+
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------VLDQVERGYRM---- 401
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
P + + +C P RPT Y+ L+
Sbjct: 402 ---PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + + V ++ SL++ L + IA A+G+ +LH
Sbjct: 67 LLFMGYSTKPQLAI-VTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 122
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT-- 260
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL 297
+ SDVY+FG+VL EL+TG+ N R+Q +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQII 219
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + + V ++ SL++ L + IA A+G+ +LH
Sbjct: 72 LLFMGYSTKPQLAI-VTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 127
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT-- 260
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKE---------PRK 310
+ SDVY+FG+VL EL+TG+ N R+Q + R L P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGRGYLSPDLSKVRSNCPKA 246
Query: 311 LERLI 315
++RL+
Sbjct: 247 MKRLM 251
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 120 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 175
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GL+F H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 113 LQGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 19/218 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G FG VYKG VAVK L++ Q + + E+ L + RH ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
+ +GY + + V ++ SL++ L + IA A+G+ +LH
Sbjct: 67 LLFMGYSTAPQLAI-VTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 122
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT-- 260
K +I+RD K++NI L D T K+ DFGLA +H ++ G+ + APE +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL 297
+ SDVY+FG+VL EL+TG+ N R+Q +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQII 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
+L HP++VKL+ E LV+E++ L + S +P +GL
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
AF H V++RD K N+L++++ KL+DFGLA+ G T + T Y AP
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAP 171
Query: 256 EYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
E ++ + +T D++S G + E++T +RA+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFLGQLRHPH 141
LG+G FG V +G D P + VAVK L L + +++ E+ + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
L++L G ++ V E P GSL ++L R + T + A+ A+G+ +L E
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL--E 132
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ-GYAAPEYVMT 260
K I+RD A N+LL + K+ DFGL + P+ ++ +V+ + APE + T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLA-EWARPLLKEPRKLERLIDPRL 319
+ SD + FGV L E+ T G+E + ++ L K ++ ERL PR
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT---------YGQEPWIGLNGSQILHKIDKEGERL--PR- 240
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
P Q +C +H P RPT
Sbjct: 241 ----PEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFLGQLRHPH 141
LG+G FG V +G D P + VAVK L L + +++ E+ + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
L++L G ++ V E P GSL ++L R + T + A+ A+G+ +L E
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL--E 128
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ-GYAAPEYVMT 260
K I+RD A N+LL + K+ DFGL + P+ ++ +V+ + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLA-EWARPLLKEPRKLERLIDPRL 319
+ SD + FGV L E+ T G+E + ++ L K ++ ERL PR
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT---------YGQEPWIGLNGSQILHKIDKEGERL--PR- 236
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
P Q +C +H P RPT
Sbjct: 237 ----PEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFLGQLRHPH 141
LG+G FG V +G D P + VAVK L L + +++ E+ + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
L++L G ++ V E P GSL ++L R + T + A+ A+G+ +L E
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL--E 138
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ-GYAAPEYVMT 260
K I+RD A N+LL + K+ DFGL + P+ ++ +V+ + APE + T
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLA-EWARPLLKEPRKLERLIDPRL 319
+ SD + FGV L E+ T G+E + ++ L K ++ ERL PR
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT---------YGQEPWIGLNGSQILHKIDKEGERL--PR- 246
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
P Q +C +H P RPT
Sbjct: 247 ----PEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFLGQLRHPH 141
LG+G FG V +G D P + VAVK L L + +++ E+ + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
L++L G ++ V E P GSL ++L R + T + A+ A+G+ +L E
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL--E 128
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ-GYAAPEYVMT 260
K I+RD A N+LL + K+ DFGL + P+ ++ +V+ + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLA-EWARPLLKEPRKLERLIDPRL 319
+ SD + FGV L E+ T G+E + ++ L K ++ ERL PR
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT---------YGQEPWIGLNGSQILHKIDKEGERL--PR- 236
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
P Q +C +H P RPT
Sbjct: 237 ----PEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
+L HP++VKL+ E LV+E++ L + + S +P +GL
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
AF H V++RD K N+L++++ KL+DFGLA+ G + T Y AP
Sbjct: 117 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 172
Query: 256 EYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
E ++ + +T D++S G + E++T +RA+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA--ALPWSTRMKIALGAAK 193
+L HP++VKL+ E LV+E++ S+ + F SA +P +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 118 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 254 APEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
APE ++ + +T D++S G + E++T +RA+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA--ALPWSTRMKIALGAAK 193
+L HP++VKL+ E LV+E++ S+ + F SA +P +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 116 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 171
Query: 254 APEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
APE ++ + +T D++S G + E++T +RA+
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+ + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+ + LD T+G + EI L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 56
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G T + T
Sbjct: 112 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 167
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 112 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 167
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA--ALPWSTRMKIALGAAK 193
+L HP++VKL+ E LV+E++ S+ + F SA +P +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 254 APEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
APE ++ + +T D++S G + E++T +RA+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L ++++ + ++ KG+ +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 134 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 27/243 (11%)
Query: 55 LSNSVIGSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVK 114
L N +KL +L+ +R + LGE FG VYKG + PG + Q VA+K
Sbjct: 11 LINQHKQAKLKEISLSAVRFMEE-------LGEDRFGKVYKGHLFGP-APGEQTQAVAIK 62
Query: 115 ALDLDGTQG--HKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF 172
L D +G +E+ E + +L+HP++V L+G +++ +++ Y G LH L
Sbjct: 63 TLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV 121
Query: 173 --------------RSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
R+ +AL + + A G+ +L V+++D N+L+
Sbjct: 122 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVY 179
Query: 219 SDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLE 278
K+SD GL ++ + ++ + + APE +M G + SD++S+GVVL E
Sbjct: 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWE 239
Query: 279 LLT 281
+ +
Sbjct: 240 VFS 242
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 115 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 170
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA--ALPWSTRMKIALGAAK 193
+L HP++VKL+ E LV+E++ S+ + F SA +P +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
GLAF H V++RD K N+L++++ KL+DFGLA+ G + T Y
Sbjct: 117 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 172
Query: 254 APEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
APE ++ + +T D++S G + E++T +RA+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 116 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 171
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 115 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 170
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 114 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 169
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 112 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 167
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 168
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 115 LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 170
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSA--ALPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L F SA +P
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 116 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 171
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 8 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 117 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 172
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 114 LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 169
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 122/305 (40%), Gaps = 51/305 (16%)
Query: 79 FSRSNL-----LGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKE- 126
F R+NL LG G FG V + G D LK VAVK L KE
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEA 95
Query: 127 WMAEIIFLGQL-RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR- 184
M+E+ + L +H ++V L+G C L++ EY G L N L R L +S
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 185 -------------MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
+ + A+G+AFL K I+RD A N+LL + + AK+ DFGLA
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+D V + APE + T SDV+S+G++L E+
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----------- 262
Query: 292 GREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSY 351
SL P + K +L+ + P + + C + P HRPT
Sbjct: 263 ----SLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 318
Query: 352 VVRVL 356
+ L
Sbjct: 319 ICSFL 323
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 125/282 (44%), Gaps = 41/282 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW-MAEIIFLGQL 137
F++ + +G+G FG VYKG +D K + VA+K +DL+ + E EI L Q
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTK-----EVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
P++ + G + ++ EY+ GS + L L + I KGL +
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDY 131
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAA 254
LH E K I+RD KA+N+LL KL+DFG+A G+ T + +GT + A
Sbjct: 132 LHSERK--IHRDIKAANVLLSEQGDVKLADFGVA-----GQLTDTQIKRNXFVGTPFWMA 184
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERL 314
PE + +D++S G+ +EL G+ + R L P
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP----------- 233
Query: 315 IDPRLEGQF--PIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
P LEGQ P K +A CL+ PR RPT +++
Sbjct: 234 --PTLEGQHSKPFKEFVEA------CLNKDPRFRPTAKELLK 267
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 116 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 171
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGA 191
+L HP++VKL+ E LV+E+ LH L + A+ +P
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLAF H V++RD K N+L++++ KL+DFGLA+ G + T
Sbjct: 114 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLW 169
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
Y APE ++ + +T D++S G + E++T +RA+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 28/269 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFLGQLRHPH 141
LG+G FG V +G D P + VAVK L L + +++ E+ + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
L++L G ++ V E P GSL ++L R + T + A+ A+G+ +L E
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL--E 138
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ-GYAAPEYVMT 260
K I+RD A N+LL + K+ DFGL + P+ ++ V+ + APE + T
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLA-EWARPLLKEPRKLERLIDPRL 319
+ SD + FGV L E+ T G+E + ++ L K ++ ERL PR
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT---------YGQEPWIGLNGSQILHKIDKEGERL--PR- 246
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
P Q +C +H P RPT
Sbjct: 247 ----PEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 28/269 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFLGQLRHPH 141
LG+G FG V +G D P + VAVK L L + +++ E+ + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
L++L G ++ V E P GSL ++L R + T + A+ A+G+ +L E
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYL--E 128
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ-GYAAPEYVMT 260
K I+RD A N+LL + K+ DFGL + P+ ++ V+ + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLA-EWARPLLKEPRKLERLIDPRL 319
+ SD + FGV L E+ T G+E + ++ L K ++ ERL PR
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT---------YGQEPWIGLNGSQILHKIDKEGERL--PR- 236
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
P Q +C +H P RPT
Sbjct: 237 ----PEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 70
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 130 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 79 FSRSNL-----LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEII 132
F R NL LGEG FG V K LK VAVK L + + ++ ++E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFH-LKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA--------------- 177
L Q+ HPH++KL G C ++ LL+ EY GSL L S
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 178 -------ALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL 230
AL + A ++G+ +L + +++RD A NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 231 AKDGPEGEETHVITRVMGT--QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
++D EE + R G + A E + TT SDV+SFGV+L E++T
Sbjct: 197 SRD--VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQG--HKE 126
L E+ L F LGE FG VYKG + PG + Q VA+K L D +G +E
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGP-APGEQTQAVAIKTLK-DKAEGPLREE 58
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-------------- 172
+ E + +L+HP++V L+G +++ +++ Y G LH L
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 173 RSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK 232
R+ +AL + + A G+ +L V+++D N+L+ K+SD GL +
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 233 DGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ + ++ + + APE +M G + SD++S+GVVL E+ +
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 79 FSRSNL-----LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEII 132
F R NL LGEG FG V K LK VAVK L + + ++ ++E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFH-LKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA--------------- 177
L Q+ HPH++KL G C ++ LL+ EY GSL L S
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 178 -------ALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL 230
AL + A ++G+ +L + +++RD A NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 231 AKDGPEGEETHVITRVMGT--QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
++D EE + R G + A E + TT SDV+SFGV+L E++T
Sbjct: 197 SRD--VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 76
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 136 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 134 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 78
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 138 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 77
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 137 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 131 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 79 FSRSNL-----LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEII 132
F R NL LGEG FG V K LK VAVK L + + ++ ++E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFH-LKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA--------------- 177
L Q+ HPH++KL G C ++ LL+ EY GSL L S
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 178 -------ALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL 230
AL + A ++G+ +L + +++RD A NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 231 AKDGPEGEETHVITRVMGT--QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
++D EE + R G + A E + TT SDV+SFGV+L E++T
Sbjct: 197 SRD--VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 75
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 135 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 131 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 69
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 129 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 102
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 162 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 149 G--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQG-HKEWMAEIIFLG 135
NF + +GEG +G VYK + L + VA+K + LD T+G + EI L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
+L HP++VKL+ E LV+E++ + L + S +P +GL
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
AF H V++RD K N+L++++ KL+DFGLA+ G + T Y AP
Sbjct: 120 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
Query: 256 EYVM-TGHLTTMSDVYSFGVVLLELLTGKRAM 286
E ++ + +T D++S G + E++T +RA+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
R LGEG FG V D + + VAVK+L + H + EI L L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDN--TGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 138 RHPHLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
H ++VK G C E+ L+ E++P GSL L ++ + + ++K A+ KG+
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGM 139
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AA 254
+L + ++RD A N+L++S++ K+ DFGL K +E + + + A
Sbjct: 140 DYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLT 281
PE +M SDV+SFGV L ELLT
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 44/299 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 66
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-------DGPEGEETHVITRVMGT 249
+L E K I+RD A N L+ ++ K++DFGL++ P G + +
Sbjct: 127 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI------- 177
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEP 308
+ APE + + SDV++FGV+L E+ T G L + LL++
Sbjct: 178 -KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKD 229
Query: 309 RKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
++ER P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 230 YRMER----------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 276
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 123/303 (40%), Gaps = 49/303 (16%)
Query: 79 FSRSNL-----LGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKE- 126
F R+NL LG G FG V + G D LK VAVK L KE
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEA 95
Query: 127 WMAEIIFLGQL-RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS--------- 176
M+E+ + L +H ++V L+G C L++ EY G L N L R
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 177 -AALPWSTR--MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD 233
A STR + + A+G+AFL K I+RD A N+LL + + AK+ DFGLA+D
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 234 GPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGR 293
V + APE + T SDV+S+G++L E+
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------- 260
Query: 294 EQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
SL P + K +L+ + P + + C + P HRPT +
Sbjct: 261 --SLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 318
Query: 354 RVL 356
L
Sbjct: 319 SFL 321
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
R LGEG FG V D + + VAVK+L + H + EI L L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDN--TGEQVAVKSLKPESGGNHIADLKKEIEILRNL 68
Query: 138 RHPHLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
H ++VK G C E+ L+ E++P GSL L ++ + + ++K A+ KG+
Sbjct: 69 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGM 127
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AA 254
+L + ++RD A N+L++S++ K+ DFGL K +E + + + A
Sbjct: 128 DYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLT 281
PE +M SDV+SFGV L ELLT
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 44/299 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 67
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-------DGPEGEETHVITRVMGT 249
+L E K I+RD A N L+ ++ K++DFGL++ P G + +
Sbjct: 128 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI------- 178
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEP 308
+ APE + + SDV++FGV+L E+ T G L + LL++
Sbjct: 179 -KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKD 230
Query: 309 RKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
++ER P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 231 YRMER----------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 277
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 149 G--TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 67 FTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE 126
+L + + ++ + + LG G FG VY+G + + VAVK L D T +E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKY------SLTVAVKTLKED-TMEVEE 53
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
++ E + +++HP+LV+L+G C E ++ E+M G+L + L + +
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+A + + +L E K I+RD A N L+ ++ K++DFGL++ G+
Sbjct: 114 MATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGA 170
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ APE + + SDV++FGV+L E+ T + P +
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI- 214
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSF 366
+P ++ L++ + P +K C +P RP+ + + + +++ FQ+S
Sbjct: 215 DPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESS 272
Query: 367 V 367
+
Sbjct: 273 I 273
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 123/303 (40%), Gaps = 49/303 (16%)
Query: 79 FSRSNL-----LGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKE- 126
F R+NL LG G FG V + G D LK VAVK L KE
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEA 95
Query: 127 WMAEIIFLGQL-RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS--------- 176
M+E+ + L +H ++V L+G C L++ EY G L N L R
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 177 -AALPWSTR--MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD 233
A STR + + A+G+AFL K I+RD A N+LL + + AK+ DFGLA+D
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 234 GPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGR 293
V + APE + T SDV+S+G++L E+
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------- 260
Query: 294 EQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
SL P + K +L+ + P + + C + P HRPT +
Sbjct: 261 --SLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 318
Query: 354 RVL 356
L
Sbjct: 319 SFL 321
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 131 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 14 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 70
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY PRG ++ +L + S T I A L++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT-ELANALSY 128
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 129 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 182
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 224
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW---MAEIIFLG 135
FS +G G FG VY + ++ VA+K + G Q +++W + E+ FL
Sbjct: 17 FSDLREIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
+LRHP+ ++ G E LV EY + + L + L + GA +GL
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+LH + +I+RD KA NILL KL DFG A +GT + AP
Sbjct: 129 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAP 180
Query: 256 EYVMT---GHLTTMSDVYSFGVVLLELLTGKRAMDN 288
E ++ G DV+S G+ +EL K + N
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW---MAEIIFLG 135
FS +G G FG VY + ++ VA+K + G Q +++W + E+ FL
Sbjct: 56 FSDLREIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
+LRHP+ ++ G E LV EY GS + L + L + GA +GL
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
A+LH + +I+RD KA NILL KL DFG A +GT + AP
Sbjct: 168 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAP 219
Query: 256 EYVMT---GHLTTMSDVYSFGVVLLELLTGKRAMDN 288
E ++ G DV+S G+ +EL K + N
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 72
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ EY+P GSL + L + + + ++ KG+ +L
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+R+ NIL++++ K+ DFGL K P+ +E + + + + APE
Sbjct: 132 GT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 66
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 127 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 183
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 234
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 235 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 276
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 65
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 126 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 233
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 234 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 275
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 31/248 (12%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-LEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
F +LG+GG+G V++ G + A V KA+ + + AE L ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 138 RHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRS----YSAALPWSTRMKIALGAA 192
+HP +V LI Y ++ +L L+ EY+ G L QL R A + + +ALG
Sbjct: 79 KHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG-- 135
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
H K +IYRD K NI+L+ KL+DFGL K+ +G TH GT
Sbjct: 136 ------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC---GTIE 186
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG---------KRAMD---NTRLGREQSLAE 299
Y APE +M D +S G ++ ++LTG K+ +D +L L +
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 300 WARPLLKE 307
AR LLK+
Sbjct: 247 EARDLLKK 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 14/201 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ--GHKEWMAEIIFLGQLRHPHL 142
LG G FG V +G + K VA+K L GT+ +E M E + QL +P++
Sbjct: 18 LGCGNFGSVRQGVYRMRKK----QIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
V+LIG C + E +LV E G LH L +P S ++ + G+ +L E+
Sbjct: 73 VRLIGVC-QAEALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL--EE 128
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMT 260
K ++RD A N+LL + + AK+SDFGL+K ++++ R G + APE +
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 261 GHLTTMSDVYSFGVVLLELLT 281
++ SDV+S+GV + E L+
Sbjct: 188 RKFSSRSDVWSYGVTMWEALS 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL---DGTQGHKEWMA 129
++I + + LG GG VY + + VA+KA+ + + + K +
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLA------EDTILNIKVAIKAIFIPPREKEETLKRFER 60
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E+ QL H ++V +I E++ LV EY+ G ++ S+ P S I
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYI-EGPTLSEYIESHG---PLSVDTAINF 116
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
H D +++RD K NIL+DS+ T K+ DFG+AK E T V+GT
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT-NHVLGT 175
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
Y +PE +D+YS G+VL E+L G+
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 71 ELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL---------DLDGT 121
+++L +F +LG+G FG V F+ E K Q A+KAL D++ T
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKV---FLAEFKKTN---QFFAIKALKKDVVLMDDDVECT 65
Query: 122 QGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW 181
K ++ HP L + +E V EY+ G L + + L
Sbjct: 66 MVEKRVLS-----LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSR 120
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETH 241
+T A GL FLH K ++YRD K NILLD D K++DFG+ K+ G+
Sbjct: 121 ATF--YAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 175
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT Y APE ++ D +SFGV+L E+L G+
Sbjct: 176 -TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-----EII 132
+F NLLG+G F VY+ E + GLE VA+K +D +K M E+
Sbjct: 12 DFKVGNLLGKGSFAGVYRA---ESIHTGLE---VAIKMIDKKAM--YKAGMVQRVQNEVK 63
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
QL+HP +++L Y + Y LV E G + N+ ++ +
Sbjct: 64 IHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQII 122
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
G+ +LH +++RD SN+LL + K++DFGLA E H + GT Y
Sbjct: 123 TGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNY 178
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
+PE SDV+S G + LL G+ D
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 65
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 126 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 233
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 234 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 275
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 31/248 (12%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-LEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
F +LG+GG+G V++ G + A V KA+ + + AE L ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 138 RHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRS----YSAALPWSTRMKIALGAA 192
+HP +V LI Y ++ +L L+ EY+ G L QL R A + + +ALG
Sbjct: 79 KHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG-- 135
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
H K +IYRD K NI+L+ KL+DFGL K+ +G TH GT
Sbjct: 136 ------HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC---GTIE 186
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG---------KRAMD---NTRLGREQSLAE 299
Y APE +M D +S G ++ ++LTG K+ +D +L L +
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 300 WARPLLKE 307
AR LLK+
Sbjct: 247 EARDLLKK 254
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 65
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 126 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 233
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 234 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 70
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 130
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 131 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 238
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 239 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 280
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK--EWMAEIIFLGQLRHPH 141
+LGEG FG V +G + ++ L+ VAVK + LD + + E+++E + HP+
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLK---VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 142 LVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAA----LPWSTRMKIALGAA 192
+++L+G C E + +++ +M G LH L S +P T +K + A
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
G+ +L ++ ++RD A N +L D T ++DFGL+K G+ +
Sbjct: 158 LGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
A E + T+ SDV++FGV + E+ T
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 123/312 (39%), Gaps = 58/312 (18%)
Query: 79 FSRSNL-----LGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKE- 126
F R+NL LG G FG V + G D LK VAVK L KE
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK-------VAVKMLKSTAHADEKEA 80
Query: 127 WMAEIIFLGQL-RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAAL------ 179
M+E+ + L +H ++V L+G C L++ EY G L N L R A L
Sbjct: 81 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP 140
Query: 180 -------------PWSTR--MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAK 224
P R + + A+G+AFL K I+RD A N+LL + + AK
Sbjct: 141 GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAK 198
Query: 225 LSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKR 284
+ DFGLA+D V + APE + T SDV+S+G++L E+
Sbjct: 199 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF---- 254
Query: 285 AMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPR 344
SL P + K +L+ + P + + C + P
Sbjct: 255 -----------SLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 303
Query: 345 HRPTMSYVVRVL 356
HRPT + L
Sbjct: 304 HRPTFQQICSFL 315
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 65
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 126 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 233
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 234 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 275
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D + VAVK L + +++ EI L L+H
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNT------GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++VK G C+ R L+ E++P GSL L + + + ++ KG+ +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY-AAPEY 257
K I+RD NIL++++ K+ DFGL K P+ +E + + + APE
Sbjct: 134 GT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 258 VMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 54 DLSNSVIGSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAV 113
DL ++++ V E R++T + ++G+G FG VY G ++ + ++ A+
Sbjct: 2 DLDSALLAEVKDVLIPHE-RVVTHS---DRVIGKGHFGVVYHGEYIDQAQNRIQC---AI 54
Query: 114 KALD-LDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEE-YRLLVYEYMPRGSLHNQL 171
K+L + Q + ++ E + + L HP+++ LIG E ++ YM G L Q
Sbjct: 55 KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDL-LQF 113
Query: 172 FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
RS + L A+G+ +L ++ ++RD A N +LD +T K++DFGLA
Sbjct: 114 IRSPQRNPTVKDLISFGLQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
Query: 232 KDGPEGE----ETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+D + E + H R+ + A E + T TT SDV+SFGV+L ELLT
Sbjct: 172 RDILDREYYSVQQHRHARL--PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 70
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 131 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 187
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 238
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
P +K C +P RP+ + + + +++ FQ+S
Sbjct: 239 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQES 278
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 42/282 (14%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG G FG V ++G D VA+K + +G+ E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
LV+L G C ++ ++ EYM G L N L R +++ + + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL-- 136
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
E K ++RD A N L++ K+SDFGL++ + EET + + ++ PE +M
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVLMY 195
Query: 261 GHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
++ SD+++FGV++ E+ + GK M R ++ A+ L RL P L
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAEHIAQGL--------RLYRPHL 245
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT----MSYVVRVLD 357
++K + C RPT +S ++ V+D
Sbjct: 246 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 10/215 (4%)
Query: 70 AELRLIT-SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQ-PVAVKALDLDGT-QGHKE 126
A LR++ + + +LG G FG VYKG + G + PVA+K L + + + +KE
Sbjct: 9 ALLRILKETELRKVKVLGSGAFGTVYKGI---WIPDGENVKIPVAIKVLRENTSPKANKE 65
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
+ E + + P++ +L+G C +L V + MP G L + + R L +
Sbjct: 66 ILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHV-RENRGRLGSQDLLN 123
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+++L ED +++RD A N+L+ S K++DFGLA+ E +
Sbjct: 124 WCMQIAKGMSYL--EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG 181
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ A E ++ T SDV+S+GV + EL+T
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 78
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 79 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 138
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 139 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 195
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 196 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 246
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 247 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 288
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 70
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 131 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 238
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 239 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 280
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 64 LHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQG 123
L+ ++ + + ++ + + LG G +G VY G + + VAVK L D T
Sbjct: 19 LYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKY------SLTVAVKTLKED-TME 71
Query: 124 HKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWST 183
+E++ E + +++HP+LV+L+G C E +V EYMP G+L + L +
Sbjct: 72 VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV 131
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
+ +A + + +L E K I+RD A N L+ ++ K++DFGL++ G+
Sbjct: 132 LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAH 188
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + + SDV++FGV+L E+ T
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 137/300 (45%), Gaps = 28/300 (9%)
Query: 68 TLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW 127
+L + + ++ + + LG G +G VY+G + + VAVK L D T +E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEF 54
Query: 128 MAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
+ E + +++HP+LV+L+G C E ++ E+M G+L + L + + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
A + + +L E K I+RD A N L+ ++ K++DFGL++ G+
Sbjct: 115 ATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAK 171
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKE 307
+ APE + + SDV++FGV+L E+ T + P + +
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-D 215
Query: 308 PRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P ++ L++ + P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 216 PSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 67
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 128 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 235
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 236 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 67
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 128 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 235
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 236 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 277
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLV 143
+GEG FG V++G + P A VA+K + ++++ E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
KLIG E ++ E G L + L R YS L ++ + A + LA+L E
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYL--ES 129
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
K ++RD A N+L+ S+ KL DFGL++ E + ++ + APE +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 263 LTTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 65
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 126 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 233
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
P +K C +P RP+ + + + +++ FQ+S
Sbjct: 234 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQES 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 41/282 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW-MAEIIFLGQL 137
F++ +G+G FG V+KG +D + + + VA+K +DL+ + E EI L Q
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
P++ K G ++ ++ EY+ GS + L L + I KGL +
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDY 139
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAA 254
LH E K I+RD KA+N+LL KL+DFG+A G+ T + +GT + A
Sbjct: 140 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRNTFVGTPFWMA 192
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERL 314
PE + + +D++S G+ +EL G+ + L P
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP----------- 241
Query: 315 IDPRLEGQF--PIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
P LEG + P+K +A CL+ P RPT +++
Sbjct: 242 --PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 275
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 71 ELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL---------DLDGT 121
+++L +F +LG+G FG V F+ E K Q A+KAL D++ T
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKV---FLAEFKKTN---QFFAIKALKKDVVLMDDDVECT 64
Query: 122 QGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW 181
K ++ HP L + +E V EY+ G L + + L
Sbjct: 65 MVEKRVLS-----LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSR 119
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETH 241
+T A GL FLH K ++YRD K NILLD D K++DFG+ K+ G+
Sbjct: 120 ATFY--AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 174
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT Y APE ++ D +SFGV+L E+L G+
Sbjct: 175 -TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG FG V++G P L K D + ++++ E + + Q HPH+VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 75
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
LIG E ++ E G L + L R YS L ++ + A + LA+L E K
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYL--ESK 130
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
++RD A N+L+ S+ KL DFGL++ E + ++ + APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 264 TTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 30/290 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 69
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 129
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 130 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 186
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 237
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDS 365
P +K C +P RP+ + + + +++ FQ+S
Sbjct: 238 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQES 277
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG FG V++G P L K D + ++++ E + + Q HPH+VK
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 77
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
LIG E ++ E G L + L R YS L ++ + A + LA+L E K
Sbjct: 78 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYL--ESK 132
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
++RD A N+L+ S+ KL DFGL++ E + ++ + APE +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 264 TTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG FG V++G P L K D + ++++ E + + Q HPH+VK
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
LIG E ++ E G L + L R YS L ++ + A + LA+L E K
Sbjct: 73 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYL--ESK 127
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
++RD A N+L+ S+ KL DFGL++ E + ++ + APE +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 264 TTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG FG V++G P L K D + ++++ E + + Q HPH+VK
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 80
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
LIG E ++ E G L + L R YS L ++ + A + LA+L E K
Sbjct: 81 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYL--ESK 135
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
++RD A N+L+ S+ KL DFGL++ E + ++ + APE +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 264 TTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG FG V++G P L K D + ++++ E + + Q HPH+VK
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 103
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
LIG E ++ E G L + L R YS L ++ + A + LA+L E K
Sbjct: 104 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYL--ESK 158
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
++RD A N+L+ S+ KL DFGL++ E + ++ + APE +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 264 TTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG FG V++G P L K D + ++++ E + + Q HPH+VK
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVK 78
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
LIG E ++ E G L + L R YS L ++ + A + LA+L E K
Sbjct: 79 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYL--ESK 133
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
++RD A N+L+ S+ KL DFGL++ E + ++ + APE +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 264 TTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 49/286 (17%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW-MAEIIFLGQL 137
F++ +G+G FG V+KG +D + + + VA+K +DL+ + E EI L Q
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
P++ K G ++ ++ EY+ GS + L L + I KGL +
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDY 134
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAA 254
LH E K I+RD KA+N+LL KL+DFG+A G+ T + +GT + A
Sbjct: 135 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRNXFVGTPFWMA 187
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERL 314
PE + + +D++S G+ +EL G+ P K+ L
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----------------PMKVLFL 230
Query: 315 I----DPRLEGQF--PIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
I P LEG + P+K +A CL+ P RPT +++
Sbjct: 231 IPKNNPPTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 270
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 137/300 (45%), Gaps = 28/300 (9%)
Query: 68 TLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW 127
+L + + ++ + + LG G +G VY+G + + VAVK L D T +E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEF 54
Query: 128 MAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
+ E + +++HP+LV+L+G C E ++ E+M G+L + L + + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
A + + +L E K I+RD A N L+ ++ K++DFGL++ G+
Sbjct: 115 ATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAK 171
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKE 307
+ APE + + SDV++FGV+L E+ T + P + +
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-D 215
Query: 308 PRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P ++ L++ + P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 216 PSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 273
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 14 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 70
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY PRG ++ +L + S T I A L++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT-ELANALSY 128
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 129 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEM 182
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 224
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLV 143
+GEG FG V++G + P A VA+K + ++++ E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
KLIG E ++ E G L + L R +S L ++ + A + LA+L E
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYL--ES 129
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG-----YAAPEY 257
K ++RD A N+L+ S+ KL DFGL++ + T ++G + APE
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TXXKASKGKLPIKWMAPES 183
Query: 258 VMTGHLTTMSDVYSFGVVLLELL 280
+ T+ SDV+ FGV + E+L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 49/286 (17%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW-MAEIIFLGQL 137
F++ +G+G FG V+KG +D + + + VA+K +DL+ + E EI L Q
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
P++ K G ++ ++ EY+ GS + L L + I KGL +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDY 119
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAA 254
LH E K I+RD KA+N+LL KL+DFG+A G+ T + +GT + A
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRNTFVGTPFWMA 172
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERL 314
PE + + +D++S G+ +EL G+ P K+ L
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----------------PMKVLFL 215
Query: 315 I----DPRLEGQF--PIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
I P LEG + P+K +A CL+ P RPT +++
Sbjct: 216 IPKNNPPTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 255
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + + A V KA L+ + E+ L
Sbjct: 6 DFEIGRPLGKGKFGNVY--LAREKQRKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 62
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 120
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 121 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 174
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 216
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 217 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 124 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG VYK E + A K +D + +++M EI L HP++VK
Sbjct: 45 LGDGAFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L+ + E ++ E+ G++ + + L S + L +LH D
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH--DNK 155
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAAPEYVMTG 261
+I+RD KA NIL D KL+DFG++ + T I R +GT + APE VM
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 262 H-----LTTMSDVYSFGVVLLEL 279
+DV+S G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 49/286 (17%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW-MAEIIFLGQL 137
F++ +G+G FG V+KG +D + + + VA+K +DL+ + E EI L Q
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
P++ K G ++ ++ EY+ GS + L L + I KGL +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDY 119
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAA 254
LH E K I+RD KA+N+LL KL+DFG+A G+ T + +GT + A
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRNXFVGTPFWMA 172
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERL 314
PE + + +D++S G+ +EL G+ P K+ L
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----------------PMKVLFL 215
Query: 315 I----DPRLEGQF--PIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
I P LEG + P+K +A CL+ P RPT +++
Sbjct: 216 IPKNNPPTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 26 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 82
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 140
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 141 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 194
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 236
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 237 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 10 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 66
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 124
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 125 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEM 178
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 220
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 221 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL-DGT-QGHKEWMAEIIFLGQLRH 139
S +G G FG VYKG VAVK L + D T + + + E+ L + RH
Sbjct: 41 STRIGSGSFGTVYKGKWHGD---------VAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+++ +GY ++ +V ++ SL+ L + IA A+G+ +LH
Sbjct: 92 VNILLFMGYMTKDNL-AIVTQWCEGSSLYKHL-HVQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
K +I+RD K++NI L T K+ DFGLA + + + G+ + APE +
Sbjct: 150 A--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 260 ---TGHLTTMSDVYSFGVVLLELLTGK 283
+ SDVYS+G+VL EL+TG+
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 35 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 91
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 149
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 150 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 203
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 245
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 246 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 124 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--------DLDGTQGHKEWM 128
S F +LG+G FG V F+ +K+ Q A+K L D T+ ++ +
Sbjct: 24 SQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
E+ HP +VKL Y ++ E +L L+ +++ G L +L + + +K
Sbjct: 81 VEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKF 130
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
L A LA H +IYRD K NILLD + KL+DFGL+K+ + E+
Sbjct: 131 YL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFC 187
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG---------KRAMD---NTRLGREQ 295
GT Y APE V T +D +SFGV++ E+LTG K M +LG Q
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247
Query: 296 SLAEWARPLLK 306
L+ A+ LL+
Sbjct: 248 FLSPEAQSLLR 258
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 37/280 (13%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW-MAEIIFLGQL 137
F++ +G+G FG V+KG +D + + Q VA+K +DL+ + E EI L Q
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQ-----QVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
++ K G + ++ EY+ GS + L +T +K L KGL +
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDY 135
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAA 254
LH E K I+RD KA+N+LL KL+DFG+A G+ T + +GT + A
Sbjct: 136 LHSEKK--IHRDIKAANVLLSEQGDVKLADFGVA-----GQLTDTQIKRNTFVGTPFWMA 188
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERL 314
PE + + +D++S G+ +EL G+ + R L P
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP----------- 237
Query: 315 IDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
P L G F + A CL+ P RPT +++
Sbjct: 238 --PTLVGDFTKSFKEFIDA----CLNKDPSFRPTAKELLK 271
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 14 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 70
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 128
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 129 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEX 182
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 224
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--------DLDGTQGHKEWM 128
S F +LG+G FG V F+ +K+ Q A+K L D T+ ++ +
Sbjct: 24 SQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
E+ HP +VKL Y ++ E +L L+ +++ G L +L + + +K
Sbjct: 81 VEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKF 130
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
L A LA H +IYRD K NILLD + KL+DFGL+K+ + E+
Sbjct: 131 YL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFC 187
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG---------KRAMD---NTRLGREQ 295
GT Y APE V T +D +SFGV++ E+LTG K M +LG Q
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247
Query: 296 SLAEWARPLLK 306
L+ A+ LL+
Sbjct: 248 FLSPEAQSLLR 258
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 85 LGEGGFGPVYKGFV--DEKL---KPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRH 139
+G G FG V+ G + D L K E P +KA +++ E L Q H
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA----------KFLQEARILKQYSH 171
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
P++V+LIG C +++ +V E + G R+ A L T +++ AA G+ +L
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVGDAAAGMEYL- 229
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
E K I+RD A N L+ K+SDFG++++ +G + APE +
Sbjct: 230 -ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 260 TGHLTTMSDVYSFGVVLLELLT 281
G ++ SDV+SFG++L E +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--------DLDGTQGHKEWM 128
S F +LG+G FG V F+ +K+ Q A+K L D T+ ++ +
Sbjct: 25 SQFELLKVLGQGSFGKV---FLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
E+ HP +VKL Y ++ E +L L+ +++ G L +L + + +K
Sbjct: 82 VEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKF 131
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
L A LA H +IYRD K NILLD + KL+DFGL+K+ + E+
Sbjct: 132 YL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFC 188
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG---------KRAMD---NTRLGREQ 295
GT Y APE V T +D +SFGV++ E+LTG K M +LG Q
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 248
Query: 296 SLAEWARPLLK 306
L+ A+ LL+
Sbjct: 249 FLSPEAQSLLR 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 14 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 70
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 128
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 129 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEM 182
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 224
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 12 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 68
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 127 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 180
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 222
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 272
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+R+ A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 333 YL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 389
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 440
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 441 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 482
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG VYK E + A K +D + +++M EI L HP++VK
Sbjct: 45 LGDGAFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L+ + E ++ E+ G++ + + L S + L +LH D
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH--DNK 155
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAAPEYVMTG 261
+I+RD KA NIL D KL+DFG++ + T I R +GT + APE VM
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 262 H-----LTTMSDVYSFGVVLLEL 279
+DV+S G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG VYK E + A K +D + +++M EI L HP++VK
Sbjct: 45 LGDGAFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L+ + E ++ E+ G++ + + L S + L +LH D
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH--DNK 155
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGYAAPEYVMTG 261
+I+RD KA NIL D KL+DFG++ + T I R +GT + APE VM
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 262 H-----LTTMSDVYSFGVVLLEL 279
+DV+S G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 70
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 131 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 238
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQD 364
P +K C +P RP+ + + + +++ FQ+
Sbjct: 239 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQE 277
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 124 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLV 143
+GEG FG V++G + P A VA+K + ++++ E + + Q HPH+V
Sbjct: 398 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
KLIG E ++ E G L + L R +S L ++ + A + LA+L E
Sbjct: 455 KLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYL--ES 509
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG-----YAAPEY 257
K ++RD A N+L+ S+ KL DFGL++ + T ++G + APE
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPES 563
Query: 258 VMTGHLTTMSDVYSFGVVLLELL 280
+ T+ SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 124 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D VAVK L G +++ EI L L
Sbjct: 18 LGKGNFGSVELCRYDPLGDNT------GALVAVKQLQHSGPDQQRDFQREIQILKALHSD 71
Query: 141 HLVKLIG--YCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
+VK G Y + LV EY+P G L + L R + A L S + + KG+ +L
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYL 130
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPE 256
+ ++RD A NIL++S+ K++DFGLAK P ++ +V+ R G + APE
Sbjct: 131 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV-REPGQSPIFWYAPE 187
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 85 LGEGGFGPVYKGFV--DEKL---KPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRH 139
+G G FG V+ G + D L K E P +KA +++ E L Q H
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA----------KFLQEARILKQYSH 171
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
P++V+LIG C +++ +V E + G R+ A L T +++ AA G+ +L
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVGDAAAGMEYL- 229
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
E K I+RD A N L+ K+SDFG++++ +G + APE +
Sbjct: 230 -ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 260 TGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPR 318
G ++ SDV+SFG++L E + G N + + E K RL P
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE----------KGGRLPCPE 338
Query: 319 LEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQ 360
L + + +C ++ P RP+ S + + L S++
Sbjct: 339 LCPDAVFRLME-------QCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 269
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 270 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 329
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+R+ A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 330 YL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPE 386
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 437
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 438 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 479
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D VAVK L G +++ EI L L
Sbjct: 15 LGKGNFGSVELCRYDPLGDNT------GALVAVKQLQHSGPDQQRDFQREIQILKALHSD 68
Query: 141 HLVKLIGYCW---EEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
+VK G + E RL V EY+P G L + L R + A L S + + KG+ +
Sbjct: 69 FIVKYRGVSYGPGRPELRL-VMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEY 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAP 255
L + ++RD A NIL++S+ K++DFGLAK P ++ V+ R G + AP
Sbjct: 127 LGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV-REPGQSPIFWYAP 183
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLT 281
E + + SDV+SFGVVL EL T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 70
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 131 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 238
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQD 364
P +K C +P RP+ + + + +++ FQ+
Sbjct: 239 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQE 277
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 14 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 70
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 128
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 129 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 182
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 224
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 225 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D VAVK L G +++ EI L L
Sbjct: 19 LGKGNFGSVELCRYDPLGDNT------GALVAVKQLQHSGPDQQRDFQREIQILKALHSD 72
Query: 141 HLVKLIG--YCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
+VK G Y + LV EY+P G L + L R + A L S + + KG+ +L
Sbjct: 73 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYL 131
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPE 256
+ ++RD A NIL++S+ K++DFGLAK P ++ +V+ R G + APE
Sbjct: 132 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV-REPGQSPIFWYAPE 188
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 8 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 64
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 122
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 123 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 176
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 218
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 219 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 12 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 68
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 127 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 180
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 222
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG+G FG V Y D VAVK L G +++ EI L L
Sbjct: 31 LGKGNFGSVELCRYDPLGDNT------GALVAVKQLQHSGPDQQRDFQREIQILKALHSD 84
Query: 141 HLVKLIG--YCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
+VK G Y + LV EY+P G L + L R + A L S + + KG+ +L
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYL 143
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG--YAAPE 256
+ ++RD A NIL++S+ K++DFGLAK P ++ +V+ R G + APE
Sbjct: 144 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV-REPGQSPIFWYAPE 200
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT 281
+ + SDV+SFGVVL EL T
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 14/201 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ--GHKEWMAEIIFLGQLRHPHL 142
LG G FG V +G + K VA+K L GT+ +E M E + QL +P++
Sbjct: 344 LGCGNFGSVRQGVYRMRKK----QIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
V+LIG C + E +LV E G LH L +P S ++ + G+ +L E+
Sbjct: 399 VRLIGVC-QAEALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL--EE 454
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMT 260
K ++R+ A N+LL + + AK+SDFGL+K ++++ R G + APE +
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINF 513
Query: 261 GHLTTMSDVYSFGVVLLELLT 281
++ SDV+S+GV + E L+
Sbjct: 514 RKFSSRSDVWSYGVTMWEALS 534
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 124 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 10 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 66
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 124
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 125 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGTLDYLPPEM 178
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 220
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 221 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 30/292 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 311
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 312 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 371
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+R+ A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 372 YL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 428
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 429 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 479
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQDFQDSFV 367
P +K C +P RP+ + + + +++ FQ+S +
Sbjct: 480 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSI 521
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 42/282 (14%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG G FG V ++G D VA+K + +G+ E++ E + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 59
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
LV+L G C ++ ++ EYM G L N L R +++ + + +L
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL-- 116
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
E K ++RD A N L++ K+SDFGL++ + E T + + ++ PE +M
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 175
Query: 261 GHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
++ SD+++FGV++ E+ + GK M R ++ A+ L RL P L
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAEHIAQGL--------RLYRPHL 225
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT----MSYVVRVLD 357
++K + C RPT +S ++ V+D
Sbjct: 226 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L +S +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 13 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 69
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 127
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P T + GT Y PE
Sbjct: 128 CH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 181
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 223
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 224 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 28/284 (9%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ 136
++ + + LG G +G VY+G + + VAVK L D T +E++ E + +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKED-TMEVEEFLKEAAVMKE 65
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
++HP+LV+L+G C E ++ E+M G+L + L + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+L E K I+RD A N L+ ++ K++DFGL++ G+ + APE
Sbjct: 126 YL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLI 315
+ + SDV++FGV+L E+ T G L + LL++ ++ER
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKDYRMER-- 233
Query: 316 DPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
P +K C +P RP+ + + + +++
Sbjct: 234 --------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 42/282 (14%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG G FG V ++G D VA+K + +G+ E++ E + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 63
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
LV+L G C ++ ++ EYM G L N L R +++ + + +L
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL-- 120
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
E K ++RD A N L++ K+SDFGL++ + E T + + ++ PE +M
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 179
Query: 261 GHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
++ SD+++FGV++ E+ + GK M R ++ A+ L RL P L
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAEHIAQGL--------RLYRPHL 229
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT----MSYVVRVLD 357
++K + C RPT +S ++ V+D
Sbjct: 230 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 42/282 (14%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG G FG V ++G D VA+K + +G+ E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
LV+L G C ++ ++ EYM G L N L R +++ + + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL-- 136
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
E K ++RD A N L++ K+SDFGL++ + E T + + ++ PE +M
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 195
Query: 261 GHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
++ SD+++FGV++ E+ + GK M R ++ A+ L RL P L
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAEHIAQGL--------RLYRPHL 245
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT----MSYVVRVLD 357
++K + C RPT +S ++ V+D
Sbjct: 246 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 42/282 (14%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG G FG V ++G D VA+K + +G+ E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
LV+L G C ++ ++ EYM G L N L R +++ + + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL-- 121
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
E K ++RD A N L++ K+SDFGL++ + E T + + ++ PE +M
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 180
Query: 261 GHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
++ SD+++FGV++ E+ + GK M R ++ A+ L RL P L
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAEHIAQGL--------RLYRPHL 230
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT----MSYVVRVLD 357
++K + C RPT +S ++ V+D
Sbjct: 231 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 83
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L +S +
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 144 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 11 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 67
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 125
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 126 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEM 179
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 221
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 222 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 42/282 (14%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG G FG V ++G D VA+K + +G+ E++ E + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 70
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
LV+L G C ++ ++ EYM G L N L R +++ + + +L
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL-- 127
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
E K ++RD A N L++ K+SDFGL++ + E T + + ++ PE +M
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 186
Query: 261 GHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
++ SD+++FGV++ E+ + GK M R ++ A+ L RL P L
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAEHIAQGL--------RLYRPHL 236
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT----MSYVVRVLD 357
++K + C RPT +S ++ V+D
Sbjct: 237 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 35 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 91
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 149
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 150 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEM 203
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 245
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 246 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E + L + HP ++++ G + + ++ +Y+ G L + L +S P A
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAA 113
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
L +LH +D +IYRD K NILLD + K++DFG AK P+ V + GT
Sbjct: 114 EVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGT 166
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE V T D +SFG+++ E+L G
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 11 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 67
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 125
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K+++FG + P T + GT Y PE
Sbjct: 126 CHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEM 179
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 221
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 222 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 87
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L +S +
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 148 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKNSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 124 CHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 86
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L +S +
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 147 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK---EWMA 129
R+ ++ + LG G FG V G K L VAVK L+ + +
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVG------KHELTGHKVAVKILNRQKIRSLDVVGKIRR 65
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
EI L RHPH++KL +V EY+ G L + + ++ L ++
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQ 123
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
G+ + H V++RD K N+LLD+ AK++DFGL+ +GE + G+
Sbjct: 124 QILSGVDYCHRH--MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGS 178
Query: 250 QGYAAPEYVMTGHLTT--MSDVYSFGVVLLELLTGKRAMDNTRL 291
YAAPE V++G L D++S GV+L LL G D+ +
Sbjct: 179 PNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L +S +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 10 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 66
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 124
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 125 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEM 178
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 220
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 221 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 116/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 12 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 68
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K+++FG + P T + GT Y PE
Sbjct: 127 CHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEM 180
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 222
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + +L H
Sbjct: 39 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNH 93
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 154 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLV 143
+GEG FG V++G + P A VA+K + ++++ E + + Q HPH+V
Sbjct: 398 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
KLIG E ++ E G L + L R +S L ++ + A + LA+L E
Sbjct: 455 KLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYL--ES 509
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG-----YAAPEY 257
K ++RD A N+L+ + KL DFGL++ + T ++G + APE
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPES 563
Query: 258 VMTGHLTTMSDVYSFGVVLLELL 280
+ T+ SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L +S +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-DLDGTQGHKEWMAEIIFLGQLRHPHLV 143
+GEG FG V++G + P A VA+K + ++++ E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
KLIG E ++ E G L + L R +S L ++ + A + LA+L E
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYL--ES 129
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
K ++RD A N+L+ + KL DFGL++ E + ++ + APE +
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 263 LTTMSDVYSFGVVLLELL 280
T+ SDV+ FGV + E+L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 12 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 68
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 127 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEM 180
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 222
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 12 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 68
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 127 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEM 180
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 222
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 79 FSRSNL-----LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEII 132
F R NL LG G FG V K G+ Q VAVK L +E M+E+
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ-VAVKMLKEKADSSEREALMSELK 100
Query: 133 FLGQL-RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSA-------------- 177
+ QL H ++V L+G C L++EY G L N L RS
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL-RSKREKFSEDEIEYENQKR 159
Query: 178 --------ALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFG 229
L + + A AKG+ FL E K ++RD A N+L+ K+ DFG
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFL--EFKSCVHRDLAARNVLVTHGKVVKICDFG 217
Query: 230 LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
LA+D V + APE + G T SDV+S+G++L E+ +
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 135
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L +S +
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 196 CAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + +L H
Sbjct: 53 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNH 107
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 168 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 124 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 9 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 65
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 123
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 124 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEM 177
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 219
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 220 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY EK + A V KA L+ + E+ L
Sbjct: 12 DFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHL 68
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELANALSY 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S K++DFG + P + GT Y PE
Sbjct: 127 CHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEM 180
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLKEPRKLERLID 316
+ D++S GV+ E L GK + NT + ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------ 222
Query: 317 PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
R+E FP + A + L H+P RP + V+
Sbjct: 223 -RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 79
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L + +
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 140 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA--EII 132
+ + + +GEG +G VYK + + VA+K + LD A EI
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKA-------KDSQGRIVALKRIRLDAEDEGIPSTAIREIS 71
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GA 191
L +L HP++V LI E LV+E+M + ++ L +++KI L
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQ-DSQIKIYLYQL 128
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+G+A H +++RD K N+L++SD KL+DFGLA+ G T + T
Sbjct: 129 LRGVA--HCHQHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLW 184
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
Y AP+ +M + +T D++S G + E++TGK
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA--EII 132
+ + + +GEG +G VYK + + VA+K + LD A EI
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKA-------KDSQGRIVALKRIRLDAEDEGIPSTAIREIS 71
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GA 191
L +L HP++V LI E LV+E+M + ++ L +++KI L
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQ-DSQIKIYLYQL 128
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+G+A H +++RD K N+L++SD KL+DFGLA+ G T + T
Sbjct: 129 LRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLW 184
Query: 252 YAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
Y AP+ +M + +T D++S G + E++TGK
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 70 AELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA 129
+E L N L+G G +G VYKG +DE+ PVAVK Q
Sbjct: 6 SEPSLDLDNLKLLELIGRGRYGAVYKGSLDER--------PVAVKVFSFANRQNFIN-EK 56
Query: 130 EIIFLGQLRHPHLVKLIGYCWEE--------EYRLLVYEYMPRGSLHNQLFRSYSAALPW 181
I + + H ++ + I +E EY LLV EY P GSL L S W
Sbjct: 57 NIYRVPLMEHDNIARFI--VGDERVTADGRMEY-LLVMEYYPNGSLXKYLSLHTS---DW 110
Query: 182 STRMKIALGAAKGLAFLHGE------DKPVI-YRDFKASNILLDSDYTAKLSDFGLA--- 231
+ ++A +GLA+LH E KP I +RD + N+L+ +D T +SDFGL+
Sbjct: 111 VSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
Query: 232 ---KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT--------TMSDVYSFGVVLLELL 280
+ GEE + +GT Y APE V+ G + D+Y+ G++ E+
Sbjct: 171 TGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 65 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 119
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 180 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP VAVK L D T+ + ++E+ + + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--------------MK 186
+++ L+G C ++ ++ EY +G+L L L + +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A A+G+ +L K I+RD A N+L+ D K++DFGLA+D + T
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV+L E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 39 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 93
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 154 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 45 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 99
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 160 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 55 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 109
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 170 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 38 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 153 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 38 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 153 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 39 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 93
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 154 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 53 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 107
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 168 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 121/251 (48%), Gaps = 37/251 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPG---LEAQPVAVKAL----DLDGTQGHKEWMA 129
S+F +LG+G FG V+ V + +P L A V KA D T+ ++ +A
Sbjct: 28 SHFELLKVLGQGSFGKVF--LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA 85
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIA 188
++ HP +VKL Y ++ E +L L+ +++ G L +L + + +K
Sbjct: 86 DV------NHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFY 135
Query: 189 LGA-AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
L A GL LH +IYRD K NILLD + KL+DFGL+K+ + E+
Sbjct: 136 LAELALGLDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK--AYSFC 191
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG---------KRAMD---NTRLGREQ 295
GT Y APE V + +D +S+GV++ E+LTG K M +LG Q
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ 251
Query: 296 SLAEWARPLLK 306
L+ A+ LL+
Sbjct: 252 FLSTEAQSLLR 262
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 29/284 (10%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL---DLDGTQGHKEWMAEIIF 133
+NF +G G F VY+ L+ PVA+K + DL + + + EI
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAAC------LLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALPWSTRMKIALGA 191
L QL HP+++K E+ +V E G L + F+ +P T K +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
L +H + V++RD K +N+ + + KL D GL + +T ++GT
Sbjct: 146 CSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPY 201
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKL 311
Y +PE + SD++S G +L E+ A+ + G + +L +K+
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEM----AALQSPFYGDKMNLYSLC-------KKI 250
Query: 312 ERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRV 355
E+ P L +++ C++ P RP ++YV V
Sbjct: 251 EQCDYPPLPSD---HYSEELRQLVNMCINPDPEKRPDVTYVYDV 291
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 42/282 (14%)
Query: 85 LGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHP 140
LG G FG V ++G D VA+K + +G+ E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
LV+L G C ++ ++ EYM G L N L R +++ + + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL-- 121
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
E K ++RD A N L++ K+SDFGL++ + E T + ++ PE +M
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-WSPPEVLMY 180
Query: 261 GHLTTMSDVYSFGVVLLELLT-GKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDPRL 319
++ SD+++FGV++ E+ + GK M R ++ A+ L RL P L
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGK--MPYERFTNSETAEHIAQGL--------RLYRPHL 230
Query: 320 EGQFPIKGAQKAAATAFKCLSHHPRHRPT----MSYVVRVLD 357
++K + C RPT +S ++ V+D
Sbjct: 231 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 41/236 (17%)
Query: 79 FSRSNL-----LGEGGFGPVYKGFVDEKLKPGL-EAQP---VAVKALDLDGTQGHK-EWM 128
+ R+N+ +GEG FG V++ PGL +P VAVK L + + + ++
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQA-----RAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 98
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS------------ 176
E + + +P++VKL+G C + L++EYM G L N+ RS S
Sbjct: 99 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDL 157
Query: 177 -----------AALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKL 225
L + ++ IA A G+A+L ++ ++RD N L+ + K+
Sbjct: 158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKI 215
Query: 226 SDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+DFGL+++ + + PE + TT SDV+++GVVL E+ +
Sbjct: 216 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 30 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 84
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 145 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 111/291 (38%), Gaps = 36/291 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQL-RHPHL 142
LG G FG V + +K A VAVK L +E M+E+ L L H ++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI--------------- 187
V L+G C L++ EY G L N L R + + T I
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 188 -ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+AFL K I+RD A NILL K+ DFGLA+D V
Sbjct: 150 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ APE + T SDV+S+G+ L EL SL P +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPYPGMP 252
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
K ++I P + C P RPT +V++++
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 111/291 (38%), Gaps = 36/291 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQL-RHPHL 142
LG G FG V + +K A VAVK L +E M+E+ L L H ++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI--------------- 187
V L+G C L++ EY G L N L R + + T I
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 188 -ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+AFL K I+RD A NILL K+ DFGLA+D V
Sbjct: 166 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ APE + T SDV+S+G+ L EL SL P +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPYPGMP 268
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
K ++I P + C P RPT +V++++
Sbjct: 269 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 79 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 133
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 194 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQL 137
+ R LG+GGF Y+ D K + V K++ L Q KE M+ EI L
Sbjct: 44 YMRGRFLGKGGFAKCYE-ITDMDTKEVFAGK-VVPKSMLLKPHQ--KEKMSTEIAIHKSL 99
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP---WSTRMKIALGAAKG 194
+PH+V G+ ++++ +V E R SL R + P + R I +G
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYA 253
+ +LH VI+RD K N+ L+ D K+ DFGLA K +GE + GT Y
Sbjct: 155 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC---GTPNYI 209
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
APE + + D++S G +L LL GK + + L
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 111/291 (38%), Gaps = 36/291 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQL-RHPHL 142
LG G FG V + +K A VAVK L +E M+E+ L L H ++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI--------------- 187
V L+G C L++ EY G L N L R + + T I
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 188 -ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+AFL K I+RD A NILL K+ DFGLA+D V
Sbjct: 168 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ APE + T SDV+S+G+ L EL SL P +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPYPGMP 270
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
K ++I P + C P RPT +V++++
Sbjct: 271 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 56 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 110
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 171 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 11/232 (4%)
Query: 54 DLSNSVIGSKLHVFTLAELRLITSN-FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVA 112
D +S+ ++ + E + +T N F + +LG+GGFG V V G
Sbjct: 160 DYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRAT---GKMYACKK 216
Query: 113 VKALDLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQL 171
++ + +G + E L ++ +V L Y +E + L LV M G L +
Sbjct: 217 LEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHI 275
Query: 172 FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
+ A P + + A GL LH E ++YRD K NILLD ++SD GLA
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLA 333
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
PEG+ I +GT GY APE V T D ++ G +L E++ G+
Sbjct: 334 VHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 67 FTLAELRLITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDG 120
L EL+ +F + + LG G G V+K G V + LE +P A++
Sbjct: 1 MALGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIR------ 51
Query: 121 TQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP 180
+ + E+ L + P++V G + + + E+M GSL L ++ +P
Sbjct: 52 ----NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIP 105
Query: 181 WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
K+++ KGL +L E +++RD K SNIL++S KL DFG++ G +E
Sbjct: 106 EQILGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE- 161
Query: 241 HVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+ +GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 162 -MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFL 134
+S F + LG G + VYKG VA+K + LD +G + EI +
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTT------GVYVALKEVKLDSEEGTPSTAIREISLM 57
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK- 193
+L+H ++V+L E LV+E+M N L + + +T + L K
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFM-----DNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 194 -------GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
GLAF H E+K +++RD K N+L++ KL DFGLA+ G + +
Sbjct: 113 FQWQLLQGLAFCH-ENK-ILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSE 168
Query: 247 MGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
+ T Y AP+ +M + S D++S G +L E++TGK
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 78 NFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEI 131
+F R + LG G G V K G + + LE +P A++ + + E+
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKP-AIR----------NQIIREL 65
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
L + P++V G + + + E+M GSL +Q+ + + +P K+++
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKE-AKRIPEEILGKVSIAV 123
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GLA+L E +++RD K SNIL++S KL DFG++ + + +GT+
Sbjct: 124 LRGLAYLR-EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRS 178
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
Y APE + H + SD++S G+ L+EL G+
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQL 137
+ R LG+GGF Y+ D K + V K++ L Q KE M+ EI L
Sbjct: 44 YMRGRFLGKGGFAKCYE-ITDMDTKEVFAGK-VVPKSMLLKPHQ--KEKMSTEIAIHKSL 99
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP---WSTRMKIALGAAKG 194
+PH+V G+ ++++ +V E R SL R + P + R I +G
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYA 253
+ +LH VI+RD K N+ L+ D K+ DFGLA K +GE + GT Y
Sbjct: 155 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC---GTPNYI 209
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
APE + + D++S G +L LL GK + + L
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG VYK E A K ++ + ++++ EI L HP++VK
Sbjct: 27 LGDGAFGKVYKAKNKET------GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L+G + + ++ E+ P G++ + + L + + L FLH K
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS--KR 137
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
+I+RD KA N+L+ + +L+DFG++ + + +GT + APE VM +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVMCETMK 195
Query: 265 TM-----SDVYSFGVVLLEL 279
+D++S G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 11/232 (4%)
Query: 54 DLSNSVIGSKLHVFTLAELRLITSN-FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVA 112
D +S+ ++ + E + +T N F + +LG+GGFG V V G
Sbjct: 160 DYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRAT---GKMYACKK 216
Query: 113 VKALDLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQL 171
++ + +G + E L ++ +V L Y +E + L LV M G L +
Sbjct: 217 LEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHI 275
Query: 172 FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
+ A P + + A GL LH E ++YRD K NILLD ++SD GLA
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLA 333
Query: 232 KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
PEG+ I +GT GY APE V T D ++ G +L E++ G+
Sbjct: 334 VHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQP----VAVKAL-DLDGTQGHKEWMAEIIFLGQLRH 139
LG G FG VY+G V G+ P VAVK L ++ Q +++ E + + + H
Sbjct: 53 LGHGAFGEVYEGQVS-----GMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNH 107
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR-----SYSAALPWSTRMKIALGAAKG 194
++V+ IG + R ++ E M G L + L S ++L + +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+L E+ I+RD A N LL AK+ DFG+A+D M
Sbjct: 168 CQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ PE M G T+ +D +SFGV+L E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 22/251 (8%)
Query: 69 LAELRLITS------NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ 122
L +LR I S ++R +G+G G VY + G Q VA++ ++L
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQP 59
Query: 123 GHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWS 182
+ + EI+ + + ++P++V + + +V EY+ GSL + + + +
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEG 116
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGEETH 241
+ + L FLH VI+RD K+ NILL D + KL+DFG A+ PE +
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 173
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL-AEW 300
+ ++GT + APE V D++S G++ +E++ G+ N R L A
Sbjct: 174 --SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 301 ARPLLKEPRKL 311
P L+ P KL
Sbjct: 232 GTPELQNPEKL 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 111/291 (38%), Gaps = 36/291 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQL-RHPHL 142
LG G FG V + +K A VAVK L +E M+E+ L L H ++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI--------------- 187
V L+G C L++ EY G L N L R + + T I
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 188 -ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+AFL K I+RD A NILL K+ DFGLA+D V
Sbjct: 173 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ APE + T SDV+S+G+ L EL SL P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPYPGMP 275
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
K ++I P + C P RPT +V++++
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G FG VYK E A K ++ + ++++ EI L HP++VK
Sbjct: 19 LGDGAFGKVYKAKNKET------GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L+G + + ++ E+ P G++ + + L + + L FLH K
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS--KR 129
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
+I+RD KA N+L+ + +L+DFG++ + + +GT + APE VM +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVMCETMK 187
Query: 265 TM-----SDVYSFGVVLLEL 279
+D++S G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF--------------RSYSAALPWSTRMK 186
+++ L+G C ++ ++ EY +G+L L R + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE---WMA 129
RL NF +LG+G FG V V E AVK L D + M
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKET------GDLYAVKVLKKDVILQDDDVECTMT 72
Query: 130 EIIFLGQLR-HPHLVKLIGYCWEEEYRLL-VYEYMPRGSL--HNQLFRSYSAALPWSTRM 185
E L R HP L +L C++ RL V E++ G L H Q R + A R
Sbjct: 73 EKRILSLARNHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA-----RA 126
Query: 186 KI-ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVIT 244
+ A L FLH DK +IYRD K N+LLD + KL+DFG+ K+G T
Sbjct: 127 RFYAAEIISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TA 182
Query: 245 RVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GT Y APE + D ++ GV+L E+L G
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 22/251 (8%)
Query: 69 LAELRLITS------NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ 122
L +LR I S ++R +G+G G VY + G Q VA++ ++L
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQP 59
Query: 123 GHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWS 182
+ + EI+ + + ++P++V + + +V EY+ GSL + + + +
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEG 116
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGEETH 241
+ + L FLH VI+RD K+ NILL D + KL+DFG A+ PE +
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 173
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL-AEW 300
+ ++GT + APE V D++S G++ +E++ G+ N R L A
Sbjct: 174 --STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 301 ARPLLKEPRKL 311
P L+ P KL
Sbjct: 232 GTPELQNPEKL 242
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 22/251 (8%)
Query: 69 LAELRLITS------NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ 122
L +LR I S ++R +G+G G VY + G Q VA++ ++L
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQP 59
Query: 123 GHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWS 182
+ + EI+ + + ++P++V + + +V EY+ GSL + + + +
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEG 116
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGEETH 241
+ + L FLH VI+RD K+ NILL D + KL+DFG A+ PE +
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 173
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL-AEW 300
+ ++GT + APE V D++S G++ +E++ G+ N R L A
Sbjct: 174 --SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 301 ARPLLKEPRKL 311
P L+ P KL
Sbjct: 232 GTPELQNPEKL 242
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHK 125
+ L +F + + LG G G V+K G V + LE +P
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-----------RN 49
Query: 126 EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
+ + E+ L + P++V G + + + E+M GSL L ++ +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILG 107
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K+++ KGL +L + K +++RD K SNIL++S KL DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHK 125
+ L +F + + LG G G V+K G V + LE +P A++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIR----------N 49
Query: 126 EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
+ + E+ L + P++V G + + + E+M GSL L ++ +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILG 107
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K+++ KGL +L E +++RD K SNIL++S KL DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 139 HPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
HPH++ LI + LV++ M +G L + L + AL I + ++FL
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFL 216
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
H + +++RD K NILLD + +LSDFG + GE+ + + GT GY APE +
Sbjct: 217 HANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEIL 271
Query: 259 MTGHLTTMS------DVYSFGVVLLELLTG 282
T D+++ GV+L LL G
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 74 LITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW 127
L +F + + LG G G V+K G V + LE +P +
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-----------RNQI 113
Query: 128 MAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
+ E+ L + P++V G + + + E+M GSL L ++ +P K+
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKV 171
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
++ KGL +L + K +++RD K SNIL++S KL DFG++ + + +
Sbjct: 172 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 226
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 69 LAELRLITS------NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ 122
L +LR+I S ++R +G+G G VY + G Q VA++ ++L
Sbjct: 7 LEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQP 60
Query: 123 GHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWS 182
+ + EI+ + + ++P++V + + +V EY+ GSL + + + +
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEG 117
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGEETH 241
+ + L FLH VI+R+ K+ NILL D + KL+DFG A+ PE +
Sbjct: 118 QIAAVCRECLQALEFLHSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 174
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL-AEW 300
+ ++GT + APE V D++S G++ +E++ G+ N R L A
Sbjct: 175 --STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 301 ARPLLKEPRKL 311
P L+ P KL
Sbjct: 233 GTPELQNPEKL 243
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHK 125
+ L +F + + LG G G V+K G V + LE +P
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-----------RN 49
Query: 126 EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
+ + E+ L + P++V G + + + E+M GSL L ++ +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILG 107
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K+++ KGL +L E +++RD K SNIL++S KL DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHK 125
+ L +F + + LG G G V+K G V + LE +P
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-----------RN 49
Query: 126 EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
+ + E+ L + P++V G + + + E+M GSL L ++ +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILG 107
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K+++ KGL +L E +++RD K SNIL++S KL DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHK 125
+ L +F + + LG G G V+K G V + LE +P
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-----------RN 49
Query: 126 EWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM 185
+ + E+ L + P++V G + + + E+M GSL L ++ +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILG 107
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
K+++ KGL +L E +++RD K SNIL++S KL DFG++ + +
Sbjct: 108 KVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 162
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--DLDGTQGHKE 126
L ++ + F+ +LG+G FG V + + ++ ++ VAVK L D+ + +E
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVK---VAVKMLKADIIASSDIEE 71
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYR------LLVYEYMPRGSLHNQLFRSYSAA-- 178
++ E + + HPH+ KL+G + +++ +M G LH L S
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 179 --LPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPE 236
LP T ++ + A G+ +L + I+RD A N +L D T ++DFGL++
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 237 GEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
G+ + A E + T SDV++FGV + E++T
Sbjct: 190 GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 78 NFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEI 131
+F + + LG G G V+K G V + LE +P + + E+
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-----------RNQIIREL 74
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
L + P++V G + + + E+M GSL L ++ +P K+++
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAV 132
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
KGL +L E +++RD K SNIL++S KL DFG++ + + +GT+
Sbjct: 133 IKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRS 187
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 22/251 (8%)
Query: 69 LAELRLITS------NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ 122
L +LR I S ++R +G+G G VY + G Q VA++ ++L
Sbjct: 7 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQP 60
Query: 123 GHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWS 182
+ + EI+ + + ++P++V + + +V EY+ GSL + + + +
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEG 117
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL-AKDGPEGEETH 241
+ + L FLH VI+RD K+ NILL D + KL+DFG A+ PE +
Sbjct: 118 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 174
Query: 242 VITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL-AEW 300
+ ++GT + APE V D++S G++ +E++ G+ N R L A
Sbjct: 175 --SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 301 ARPLLKEPRKL 311
P L+ P KL
Sbjct: 233 GTPELQNPEKL 243
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 74 LITSNFSRSNLLGEGGFGPVYK------GFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW 127
L +F + + LG G G V+K G V + LE +P +
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-----------RNQI 78
Query: 128 MAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
+ E+ L + P++V G + + + E+M GSL L ++ +P K+
Sbjct: 79 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKV 136
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
++ KGL +L E +++RD K SNIL++S KL DFG++ + + +
Sbjct: 137 SIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 191
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT+ Y +PE + H + SD++S G+ L+E+ G+
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQL 137
+ R LG+GGF Y+ D K + V K++ L Q KE M+ EI L
Sbjct: 28 YMRGRFLGKGGFAKCYE-ITDMDTKEVFAGK-VVPKSMLLKPHQ--KEKMSTEIAIHKSL 83
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP---WSTRMKIALGAAKG 194
+PH+V G+ ++++ +V E R SL R + P + R I +G
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 138
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYA 253
+ +LH VI+RD K N+ L+ D K+ DFGLA K +GE + GT Y
Sbjct: 139 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCGTPNYI 193
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
APE + + D++S G +L LL GK + + L
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 231
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQL 137
+ R LG+GGF Y+ D K + V K++ L Q KE M+ EI L
Sbjct: 44 YMRGRFLGKGGFAKCYE-ITDMDTKEVFAGK-VVPKSMLLKPHQ--KEKMSTEIAIHKSL 99
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP---WSTRMKIALGAAKG 194
+PH+V G+ ++++ +V E R SL R + P + R I +G
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYA 253
+ +LH VI+RD K N+ L+ D K+ DFGLA K +GE + GT Y
Sbjct: 155 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCGTPNYI 209
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
APE + + D++S G +L LL GK + + L
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 13 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 123
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 15 LGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 118/293 (40%), Gaps = 38/293 (12%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTRMKI------------ 187
++V L+G C + L+V E+ G+L L + +P+ T +
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 188 -ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 153 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ APE + T SDV+SFGV+L E+ SL P +K
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVK 255
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
+ R + + P + T C P RPT S +V L +L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY E+ + A V K L+ + E+ L
Sbjct: 13 DFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKT-QLEKAGVEHQLRREVEIQSHL 69
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT-ELANALSY 127
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S+ K++DFG + P T + GT Y PE
Sbjct: 128 CHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEM 181
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
+ D++S GV+ E L G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 84 LLGE-GGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHL 142
++GE G FG VYK E + A K +D + +++M EI L HP++
Sbjct: 16 IIGELGDFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
VKL+ + E ++ E+ G++ + + L S + L +LH D
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH--D 126
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR--VMGTQGYAAPEYVMT 260
+I+RD KA NIL D KL+DFG++ + T + R +GT + APE VM
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 261 GH-----LTTMSDVYSFGVVLLEL 279
+DV+S G+ L+E+
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 208 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 13/218 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMDNTRLGREQSLAEW 300
DV+S G+VL +L G+ D Q ++W
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS-DSXQEYSDW 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ-LRHPHLV 143
LGEG +G V + + VAVK +D+ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD------LDGTQGHKE 126
R+ ++ + LG G FG V G + L VAVK L+ LD K
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
EI L RHPH++KL +V EY+ G L + + + + R+
Sbjct: 61 ---EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 117
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ +A H V++RD K N+LLD+ AK++DFGL+ +GE +
Sbjct: 118 QQILSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRTS 170
Query: 247 MGTQGYAAPEYVMTGHLTT--MSDVYSFGVVLLELLTGKRAMDN 288
G+ YAAPE V++G L D++S GV+L LL G D+
Sbjct: 171 CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
R+ + F LLG+G FG V V EK A + K + + + H + E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTEN 202
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S +S G
Sbjct: 203 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGG----ELFFHLSRERVFSEDRARFYG 257
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH E K V+YRD K N++LD D K++DFGL K+G + T + G
Sbjct: 258 AEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCG 314
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 35 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 147
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 35 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 147
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD------LDGTQGHKE 126
R+ ++ + LG G FG V G + L VAVK L+ LD K
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
EI L RHPH++KL +V EY+ G L + + + + R+
Sbjct: 61 ---EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 117
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ +A H V++RD K N+LLD+ AK++DFGL+ +GE +
Sbjct: 118 QQILSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDS 170
Query: 247 MGTQGYAAPEYVMTGHLTT--MSDVYSFGVVLLELLTGKRAMDN 288
G+ YAAPE V++G L D++S GV+L LL G D+
Sbjct: 171 CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG +G V + + VAVK +D+ E + EI L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 33 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 91 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 145
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 205 FSSKSDVWSFGVLMWEAFS 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
R+ + F LLG+G FG V V EK A + K + + + H + E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTEN 199
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S +S G
Sbjct: 200 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGG----ELFFHLSRERVFSEDRARFYG 254
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH E K V+YRD K N++LD D K++DFGL K+G + T + G
Sbjct: 255 AEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCG 311
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 13 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 71 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 125
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 185 FSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 15 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 127
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 187 FSSKSDVWSFGVLMWEAFS 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ-LRHPHLV 143
LGEG +G V + + VAVK +D+ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 88
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 149 CTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 131
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 377 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 435 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 489
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 549 FSSKSDVWSFGVLMWEAFS 567
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 90
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 151 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 25 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 83 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 137
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 197 FSSKSDVWSFGVLMWEAFS 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 378 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 436 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 490
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + + G + APE +
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 550 FSSKSDVWSFGVLMWEAFS 568
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-----DLDGTQGHKEWMAEII 132
+F ++G G + V V K + A V K L D+D Q K +
Sbjct: 21 DFDLLRVIGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH-----V 73
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLL-VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F HP LV L C++ E RL V EY+ G L + R LP +
Sbjct: 74 FEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEI 130
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ L +LH ++ +IYRD K N+LLDS+ KL+D+G+ K+G +T + GT
Sbjct: 131 SLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPN 186
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
Y APE + D ++ GV++ E++ G+ D
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 154 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
R+ + F LLG+G FG V V EK A + K + + + H + E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTEN 59
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S +S G
Sbjct: 60 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGG----ELFFHLSRERVFSEDRARFYG 114
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH E K V+YRD K N++LD D K++DFGL K+G + T + G
Sbjct: 115 AEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 171
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 70 AELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWM 128
A R+ + F LLG+G FG V V EK A + K + + + H +
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHT--L 57
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
E L RHP L L Y ++ RL V EY G +LF S +S
Sbjct: 58 TENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGG----ELFFHLSRERVFSEDRAR 112
Query: 188 ALGA--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
GA L +LH E K V+YRD K N++LD D K++DFGL K+G + T +
Sbjct: 113 FYGAEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 169
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT Y APE + D + GVV+ E++ G+
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQ-LRHPHLV 143
LGEG +G V + + VAVK +D+ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
R+ + F LLG+G FG V V EK A + K + + + H + E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTEN 61
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S +S G
Sbjct: 62 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGG----ELFFHLSRERVFSEDRARFYG 116
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH E K V+YRD K N++LD D K++DFGL K+G + T + G
Sbjct: 117 AEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 173
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ EY +G+L L + +S +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + +++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-----DLDGTQGHKEWMAEII 132
+F ++G G + V V K + A V K L D+D Q K +
Sbjct: 6 DFDLLRVIGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH-----V 58
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLL-VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F HP LV L C++ E RL V EY+ G L + R LP +
Sbjct: 59 FEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEI 115
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ L +LH ++ +IYRD K N+LLDS+ KL+D+G+ K+G +T + GT
Sbjct: 116 SLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPN 171
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
Y APE + D ++ GV++ E++ G+ D
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 61 GSKLH----VFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL 116
G LH +F + + + +LG+G FG V K + Q AVK +
Sbjct: 29 GDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVI 82
Query: 117 ---DLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-- 171
+ + + E+ L QL HP+++KL + ++ Y LV E G L +++
Sbjct: 83 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 142
Query: 172 ---FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKL 225
F AA +I G+ ++H +++RD K N+LL+S D ++
Sbjct: 143 RKRFSEVDAA-------RIIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRI 193
Query: 226 SDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
DFGL+ E + + +GT Y APE V+ G DV+S GV+L LL+G
Sbjct: 194 IDFGLS---THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-----DLDGTQGHKEWMAEII 132
+F ++G G + V V K + A V K L D+D Q K +
Sbjct: 53 DFDLLRVIGRGSYAKVL--LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH-----V 105
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLL-VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F HP LV L C++ E RL V EY+ G L + R LP +
Sbjct: 106 FEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEI 162
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ L +LH ++ +IYRD K N+LLDS+ KL+D+G+ K+G +T + GT
Sbjct: 163 SLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPN 218
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
Y APE + D ++ GV++ E++ G+ D
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL-----DLDGTQGHKEWMAEI 131
+F ++G G + V V K + A V K L D+D Q K
Sbjct: 9 QDFDLLRVIGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH----- 61
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLL-VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
+F HP LV L C++ E RL V EY+ G L + R LP +
Sbjct: 62 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAE 118
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
+ L +LH ++ +IYRD K N+LLDS+ KL+D+G+ K+G +T + GT
Sbjct: 119 ISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTP 174
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
Y APE + D ++ GV++ E++ G+ D
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V KG+ ++K ++ V + + + E +AE + QL +P++V+
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
+IG C E E +LV E G L+ L ++ +++ + G+ +L E+
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL--EESN 131
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMTGH 262
++RD A N+LL + + AK+SDFGL+K +E + G + APE +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 263 LTTMSDVYSFGVVLLELLT 281
++ SDV+SFGV++ E +
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 61 GSKLH----VFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL 116
G LH +F + + + +LG+G FG V K + Q AVK +
Sbjct: 30 GDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVI 83
Query: 117 ---DLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-- 171
+ + + E+ L QL HP+++KL + ++ Y LV E G L +++
Sbjct: 84 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 143
Query: 172 ---FRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKL 225
F AA +I G+ ++H +++RD K N+LL+S D ++
Sbjct: 144 RKRFSEVDAA-------RIIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRI 194
Query: 226 SDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
DFGL+ E + + +GT Y APE V+ G DV+S GV+L LL+G
Sbjct: 195 IDFGLS---THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIFLGQLRHPHLV 143
LGEG G V + + VAVK +D+ E + EI L H ++V
Sbjct: 14 LGEGAAGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
K G+ E + L EY G L +++ P + R L A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHL 263
+ +RD K N+LLD K+SDFGLA ++ ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 264 TTMS-DVYSFGVVLLELLTGKRAMD 287
DV+S G+VL +L G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQ-PVAVKALD---LDGTQGHKEWMAEIIFLGQLRHP 140
LGEG FG V KL + Q VA+K + L + H EI +L LRHP
Sbjct: 17 LGEGSFGKV-------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
H++KL ++V EY G L + + R + A H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
+++RD K N+LLD + K++DFGL+ +G + + G+ YAAPE V+
Sbjct: 129 ----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPE-VIN 180
Query: 261 GHLTT--MSDVYSFGVVLLELLTGKRAMDN 288
G L DV+S G+VL +L G+ D+
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA---TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTRMK----------IAL 189
++V L+G C + L+V E+ G+L L + +P+ K +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 152 QVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPR 309
+ APE + T SDV+SFGV+L E+ SL P +K
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKIDE 254
Query: 310 KLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
+ R + + P + T C P RPT S +V L +L
Sbjct: 255 EFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 110/291 (37%), Gaps = 36/291 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQL-RHPHL 142
LG G FG V + +K A VAVK L +E M+E+ L L H ++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI--------------- 187
V L+G C L++ EY G L N L R + + T I
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 188 -ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
+ AKG+AFL K I+RD A NILL K+ DFGLA+ V
Sbjct: 173 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ APE + T SDV+S+G+ L EL SL P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPYPGMP 275
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLD 357
K ++I P + C P RPT +V++++
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLG 135
++F LG GGFG V++ K ++ A+K + L + +E M E+ L
Sbjct: 5 TDFEPIQCLGRGGFGVVFEA------KNKVDDCNYAIKRIRLPNRELAREKVMREVKALA 58
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALP-W------------S 182
+L HP +V+ E+ + P+ L+ Q+ L W S
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHV 242
+ I L A+ + FLH K +++RD K SNI D K+ DFGL + EE
Sbjct: 119 VCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 243 ITRVM----------GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELL 280
+ M GT+ Y +PE + + D++S G++L ELL
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 143 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 245
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 66 VFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL---DLDGTQ 122
+F + + + +LG+G FG V K + Q AVK + +
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKT 68
Query: 123 GHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSA 177
+ + E+ L QL HP+++KL + ++ Y LV E G L +++ F A
Sbjct: 69 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 128
Query: 178 ALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDG 234
A +I G+ ++H +++RD K N+LL+S D ++ DFGL+
Sbjct: 129 A-------RIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--- 176
Query: 235 PEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
E + + +GT Y APE V+ G DV+S GV+L LL+G
Sbjct: 177 THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 143 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 245
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 117/292 (40%), Gaps = 37/292 (12%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTA---TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR------------MKI 187
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 154 SFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKE 307
+ APE + T SDV+SFGV+L E+ SL P +K
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKI 256
Query: 308 PRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
+ R + + P + T C P RPT S +V L +L
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F LG+G FG VY E+ + A V K L+ + E+ L
Sbjct: 13 DFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKT-QLEKAGVEHQLRREVEIQSHL 69
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
RHP++++L GY + L+ EY P G+++ +L + S T I A L++
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT-ELANALSY 127
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
H K VI+RD K N+LL S+ K++DFG + P + GT Y PE
Sbjct: 128 CHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEM 181
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
+ D++S GV+ E L G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKA-LDLDGTQGHKEWMAEIIFLGQ 136
+F LG+G FG VY EK + A V K+ ++ +G + + EI
Sbjct: 24 DFEIGRPLGKGKFGNVY--LAREKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAH 79
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
L HP++++L Y ++ L+ EY PRG L+ +L + S I A L
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK--SCTFDEQRTATIMEELADALM 137
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPE 256
+ HG K VI+RD K N+LL K++DFG + P + GT Y PE
Sbjct: 138 YCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGTLDYLPPE 191
Query: 257 YVMTGHLTTMSDVYSFGVVLLELLTG 282
+ D++ GV+ ELL G
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 70 AELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWM 128
A ++ ++F LLG+G FG V V EK A + K + + + H +
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHT--V 56
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
E L RHP L L Y ++ RL V EY G +LF S ++
Sbjct: 57 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERAR 111
Query: 188 ALGA--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
GA L +LH D V+YRD K N++LD D K++DFGL K+G T +
Sbjct: 112 FYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKT 167
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT Y APE + D + GVV+ E++ G+
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA---TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTRMK----------IAL 189
++V L+G C + L+V E+ G+L L + +P+ K +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 152 QVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPR 309
+ APE + T SDV+SFGV+L E+ SL P +K
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKIDE 254
Query: 310 KLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
+ R + + P + T C P RPT S +V L +L
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 254
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 112/240 (46%), Gaps = 20/240 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKP----GLEAQPVAVKALDLDGTQGHKEWMAEIIF 133
NF +LG G +G V F+ K+ L A V KA + + + E
Sbjct: 55 NFELLKVLGTGAYGKV---FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 134 LGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
L +R + + Y ++ E +L L+ +Y+ G L L + ++I +G
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEI 168
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
LA H +IYRD K NILLDS+ L+DFGL+K+ +ET GT Y
Sbjct: 169 V-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEY 226
Query: 253 AAPEYVM---TGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK-EP 308
AP+ V +GH + D +S GV++ ELLTG A T G + S AE +R +LK EP
Sbjct: 227 MAPDIVRGGDSGHDKAV-DWWSLGVLMYELLTG--ASPFTVDGEKNSQAEISRRILKSEP 283
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 48/289 (16%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRHPHL 142
L E G ++KG + + VK L + T+ +++ E L HP++
Sbjct: 18 LNENHSGELWKG--------RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 143 VKLIGYCWE--EEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
+ ++G C + L+ +MP GSL+N L + + S +K AL A+G+AFLH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLS--DFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
+ + + ++++D D TA++S D + P M + APE +
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR---------MYAPAWVAPEAL 180
Query: 259 MTGHLTT---MSDVYSFGVVLLELLTGKRA---MDNTRLGREQSLAEWARPLLKEPRKLE 312
T +D++SF V+L EL+T + + N +G + +L E RP +
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-EGLRPTIPPG---- 235
Query: 313 RLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
I P + I C++ P RP +V +L+ +QD
Sbjct: 236 --ISPHVSKLMKI------------CMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 121/282 (42%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPG-LEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+G F ++KG E G L V +K LD + + + +L H HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA-LPWSTRMKIALGAAKGLAFLHGED 202
G C+ + +LV E++ GSL L ++ + + W ++++A A + FL E+
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL--EE 131
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMT 260
+I+ + A NILL + K + K G V+ + + + + PE +
Sbjct: 132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPL--LKEPRKLERLIDP 317
+L +D +SFG L E+ +G +PL L RKL+ D
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSGG-----------------DKPLSALDSQRKLQFYED- 233
Query: 318 RLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
Q P A + A C+ + P HRP+ ++R L+SL
Sbjct: 234 --RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 66 VFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL---DLDGTQ 122
+F + + + +LG+G FG V K + Q AVK + +
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKT 74
Query: 123 GHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSA 177
+ + E+ L QL HP+++KL + ++ Y LV E G L +++ F A
Sbjct: 75 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 134
Query: 178 ALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDG 234
A +I G+ ++H +++RD K N+LL+S D ++ DFGL+
Sbjct: 135 A-------RIIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--- 182
Query: 235 PEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
E + + +GT Y APE V+ G DV+S GV+L LL+G
Sbjct: 183 THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ Y +G+L L + +S +
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 73 RLITSNFSRSNLLGEGGFGPVY----KGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
R+ ++F+ +LG+G FG V KG +E + + V ++ D++ T M
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKG-TEELYAIKILKKDVVIQDDDVECT------M 67
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSL--HNQLFRSYS--AALPWST 183
E L L P + + C++ RL V EY+ G L H Q + A+ ++
Sbjct: 68 VEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAA 127
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
+ I GL FLH + +IYRD K N++LDS+ K++DFG+ K E V
Sbjct: 128 EISI------GLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVT 176
Query: 244 TR-VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
TR GT Y APE + D +++GV+L E+L G+ D
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD-LDGTQGHKEWMAEIIF 133
I+S+F +LLGEG +G V KP E VA+K ++ D + EI
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSA----THKPTGEI--VAIKKIEPFDKPLFALRTLREIKI 62
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAA 192
L +H +++ + + + Y+ + + L R S + ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---------DGPEGEETHVI 243
+ + LHG + VI+RD K SN+L++S+ K+ DFGLA+ P G+++ +
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG-M 179
Query: 244 TRVMGTQGYAAPEYVMT-GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL 297
T + T+ Y APE ++T + DV+S G +L EL +R + R R Q L
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--DLDGTQGHKEWMAEIIFLGQLRHPH 141
L+GEG +G V K + + VA+K D K M EI L QLRH +
Sbjct: 32 LVGEGSYGMVMK------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
LV L+ C +++ LV+E++ L + + L + K G+ F H
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGYAAPEYVMT 260
+ +I+RD K NIL+ KL DFG A+ GE V + T+ Y APE ++
Sbjct: 144 N--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPE-LLV 197
Query: 261 GHLT--TMSDVYSFGVVLLELLTGK 283
G + DV++ G ++ E+ G+
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQ 136
+ R +GEG FG K + +K + + +K +++ ++ +E E+ L
Sbjct: 26 YVRLQKIGEGSFG---KAIL---VKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQ-------LFRSYSAALPWSTRMKIAL 189
++HP++V+ E +V +Y G L + LF+ L W ++ +AL
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE-DQILDWFVQICLAL 138
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
H D+ +++RD K+ NI L D T +L DFG+A+ + +GT
Sbjct: 139 K--------HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGT 188
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD 287
Y +PE SD+++ G VL EL T K A +
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 40/223 (17%)
Query: 88 GGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAE--IIFLGQLRHPHLVKL 145
G FG V+K L VAVK L Q + W +E I ++H +L++
Sbjct: 26 GRFGCVWKA--------QLMNDFVAVKIFPL---QDKQSWQSEREIFSTPGMKHENLLQF 74
Query: 146 I-----GYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
I G E E L+ + +GSL + L + W+ +A ++GL++LH
Sbjct: 75 IAAEKRGSNLEVEL-WLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLH- 129
Query: 201 EDKP----------VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
ED P + +RDFK+ N+LL SD TA L+DFGLA G+ +GT+
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 251 GYAAPEYVMTGHLTTMS------DVYSFGVVLLELLTGKRAMD 287
Y APE V+ G + D+Y+ G+VL EL++ +A D
Sbjct: 190 RYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD-LDGTQGHKEWMAEIIF 133
I+S+F +LLGEG +G V KP E VA+K ++ D + EI
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSA----THKPTGEI--VAIKKIEPFDKPLFALRTLREIKI 62
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAA 192
L +H +++ + + + Y+ + + L R S + ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---------DGPEGEETHVI 243
+ + LHG + VI+RD K SN+L++S+ K+ DFGLA+ P G+++ +
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG-M 179
Query: 244 TRVMGTQGYAAPEYVMT-GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL 297
T + T+ Y APE ++T + DV+S G +L EL +R + R R Q L
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 254
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 41/248 (16%)
Query: 54 DLSNSVIGSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAV 113
D++ S GS L + R I +G+G FG V++G + VAV
Sbjct: 22 DMTTSGSGSGLPLLVQ---RTIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAV 70
Query: 114 KALDLDGTQGHKEWM--AEIIFLGQLRHPHLVKLIGY------CWEEEYRLLVYEYMPRG 165
K ++ + W AEI LRH +++ I W + + LV +Y G
Sbjct: 71 KIF---SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW--LVSDYHEHG 125
Query: 166 SLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE-----DKPVI-YRDFKASNILLDS 219
SL + L R Y+ + +K+AL A GLA LH E KP I +RD K+ NIL+
Sbjct: 126 SLFDYLNR-YTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 182
Query: 220 DYTAKLSDFGLAKDGPEGEETHVI--TRVMGTQGYAAPEY----VMTGHLTTM--SDVYS 271
+ T ++D GLA +T I +GT+ Y APE + H + +D+Y+
Sbjct: 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA 242
Query: 272 FGVVLLEL 279
G+V E+
Sbjct: 243 MGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 41/248 (16%)
Query: 54 DLSNSVIGSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAV 113
D++ S GS L + R I +G+G FG V++G + VAV
Sbjct: 9 DMTTSGSGSGLPLLVQ---RTIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAV 57
Query: 114 KALDLDGTQGHKEWM--AEIIFLGQLRHPHLVKLIGY------CWEEEYRLLVYEYMPRG 165
K ++ + W AEI LRH +++ I W + + LV +Y G
Sbjct: 58 KIF---SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW--LVSDYHEHG 112
Query: 166 SLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE-----DKPVI-YRDFKASNILLDS 219
SL + L R Y+ + +K+AL A GLA LH E KP I +RD K+ NIL+
Sbjct: 113 SLFDYLNR-YTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 169
Query: 220 DYTAKLSDFGLAKDGPEGEETHVI--TRVMGTQGYAAPEY----VMTGHLTTM--SDVYS 271
+ T ++D GLA +T I +GT+ Y APE + H + +D+Y+
Sbjct: 170 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA 229
Query: 272 FGVVLLEL 279
G+V E+
Sbjct: 230 MGLVFWEI 237
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 143 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 245
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 22/235 (9%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD-LDGTQGHKEWMAEIIF 133
I+S+F +LLGEG +G V KP E VA+K ++ D + EI
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSA----THKPTGEI--VAIKKIEPFDKPLFALRTLREIKI 62
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAA 192
L +H +++ + + + Y+ + + L R S + ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK---------DGPEGEETHVI 243
+ + LHG + VI+RD K SN+L++S+ K+ DFGLA+ P G+++ ++
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 244 TRVMGTQGYAAPEYVMT-GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSL 297
V T+ Y APE ++T + DV+S G +L EL +R + R R Q L
Sbjct: 181 EFV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
++ ++F LLG+G FG V V EK A + K + + + H + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHT--VTES 56
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S ++ G
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARFYG 111
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH D V+YRD K N++LD D K++DFGL K+G T + G
Sbjct: 112 AEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 167
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 189 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 291
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 292 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 85 LGEGGFGPVY--KGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL-RHP 140
LGEG FG V + +K KP EA VAVK L D T+ + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK-------------- 186
+++ L+G C ++ ++ Y +G+L L + +S +
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 187 IALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRV 246
A+G+ +L + I+RD A N+L+ + K++DFGLA+D + T
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + T SDV+SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 143 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 245
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 78 NFSRSNLLGEGGFGPV---YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
N+ LGEG FG V Y +K+ + + V K+ QG E EI +L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS----DMQGRIE--REISYL 68
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEY---------MPRGSLHNQ----LFRSYSAALPW 181
LRHPH++KL ++ ++V EY + R + Q F+ +A+ +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 128
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETH 241
R KI ++RD K N+LLD K++DFGL+ +G +
Sbjct: 129 CHRHKI------------------VHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---N 167
Query: 242 VITRVMGTQGYAAPEYVMTGHLTT--MSDVYSFGVVLLELLTGKRAMDN 288
+ G+ YAAPE V++G L DV+S GV+L +L + D+
Sbjct: 168 FLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 31/282 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPG-LEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+G F ++KG E G L V +K LD + + + +L H HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAA-LPWSTRMKIALGAAKGLAFLHGED 202
G C + +LV E++ GSL L ++ + + W ++++A A + FL E+
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL--EE 131
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ--GYAAPEYVMT 260
+I+ + A NILL + K + K G V+ + + + + PE +
Sbjct: 132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 261 -GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPL--LKEPRKLERLIDP 317
+L +D +SFG L E+ +G +PL L RKL+ D
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSGG-----------------DKPLSALDSQRKLQFYED- 233
Query: 318 RLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
Q P A + A C+ + P HRP+ ++R L+SL
Sbjct: 234 --RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
++ ++F LLG+G FG V V EK A + K + + + H + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHT--VTES 56
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S ++ G
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARFYG 111
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH D V+YRD K N++LD D K++DFGL K+G T + G
Sbjct: 112 AEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 167
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
++ ++F LLG+G FG V V EK A + K + + + H + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHT--VTES 56
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S ++ G
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARFYG 111
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH D V+YRD K N++LD D K++DFGL K+G T + G
Sbjct: 112 AEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCG 167
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
++ ++F LLG+G FG V V EK A + K + + + H + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHT--VTES 56
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S ++ G
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARFYG 111
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH D V+YRD K N++LD D K++DFGL K+G T + G
Sbjct: 112 AEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 167
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 78 NFSRSNLLGEGGFGPV---YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
N+ LGEG FG V Y +K+ + + V K+ QG E EI +L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS----DMQGRIE--REISYL 58
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEY---------MPRGSLHNQ----LFRSYSAALPW 181
LRHPH++KL ++ ++V EY + R + Q F+ +A+ +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 118
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETH 241
R KI ++RD K N+LLD K++DFGL+ +G +
Sbjct: 119 CHRHKI------------------VHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---N 157
Query: 242 VITRVMGTQGYAAPEYVMTGHLTT--MSDVYSFGVVLLELLTGKRAMDN 288
+ G+ YAAPE V++G L DV+S GV+L +L + D+
Sbjct: 158 FLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 78 NFSRSNLLGEGGFGPV---YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
N+ LGEG FG V Y +K+ + + V K+ QG E EI +L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS----DMQGRIE--REISYL 67
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEY---------MPRGSLHNQ----LFRSYSAALPW 181
LRHPH++KL ++ ++V EY + R + Q F+ +A+ +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 127
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETH 241
R KI ++RD K N+LLD K++DFGL+ +G +
Sbjct: 128 CHRHKI------------------VHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---N 166
Query: 242 VITRVMGTQGYAAPEYVMTGHLTT--MSDVYSFGVVLLELLTGKRAMDN 288
+ G+ YAAPE V++G L DV+S GV+L +L + D+
Sbjct: 167 FLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
++ ++F LLG+G FG V V EK A + K + + + H + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHT--VTES 56
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S ++ G
Sbjct: 57 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARFYG 111
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH D V+YRD K N++LD D K++DFGL K+G T + G
Sbjct: 112 AEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCG 167
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEI 131
++ ++F LLG+G FG V V EK A + K + + + H + E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHT--VTES 61
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
L RHP L L Y ++ RL V EY G +LF S ++ G
Sbjct: 62 RVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGG----ELFFHLSRERVFTEERARFYG 116
Query: 191 A--AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
A L +LH D V+YRD K N++LD D K++DFGL K+G T + G
Sbjct: 117 AEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCG 172
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
T Y APE + D + GVV+ E++ G+
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 254
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
++ + R LG G +G V +KL G E +K + T + E+ L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVL--LCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVL 58
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAK 193
QL HP+++KL + ++ LV E G L +++ R + + + MK L
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS--- 115
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
G +LH + +++RD K N+LL+S D K+ DFGL+ G + + +GT
Sbjct: 116 GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTA 170
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE V+ DV+S GV+L LL G
Sbjct: 171 YYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
++ + R LG G +G V +KL G E +K + T + E+ L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVL--LCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-FRSYSAALPWSTRMKIALGAAK 193
QL HP+++KL + ++ LV E G L +++ R + + + MK L
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS--- 132
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
G +LH + +++RD K N+LL+S D K+ DFGL+ G + + +GT
Sbjct: 133 GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTA 187
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE V+ DV+S GV+L LL G
Sbjct: 188 YYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH--KEWMAEIIFLGQLRHPH 141
+LG+G FG V K K + Q AVK ++ + + E+ L +L HP+
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIALGAAKGLA 196
++KL + +V E G L +++ F + AA +I G+
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGIT 135
Query: 197 FLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
++H + +++RD K NILL+S D K+ DFGL+ + T + R+ GT Y
Sbjct: 136 YMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE V+ G DV+S GV+L LL+G
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 78 NFSRSNLLGEGGFGPV---YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
N+ LGEG FG V Y +K+ + + V K+ QG E EI +L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS----DMQGRIE--REISYL 62
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEY---------MPRGSLHNQ----LFRSYSAALPW 181
LRHPH++KL ++ ++V EY + R + Q F+ +A+ +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 122
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETH 241
R KI ++RD K N+LLD K++DFGL+ +G +
Sbjct: 123 CHRHKI------------------VHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---N 161
Query: 242 VITRVMGTQGYAAPEYVMTGHLTT--MSDVYSFGVVLLELLTGKRAMDN 288
+ G+ YAAPE V++G L DV+S GV+L +L + D+
Sbjct: 162 FLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 39/294 (13%)
Query: 85 LGEGGFGPVYKG--FVDEKLKPGLEAQPVAVKALDLDGTQG-HKEWMAEIIFLGQL-RHP 140
LG G FG V + F +K + VAVK L T H+ M+E+ L + H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTA---TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 141 HLVKLIGYCWEEEYRLLVY-EYMPRGSLHNQLFRSYSAALPWSTR--------------M 185
++V L+G C + L+V E+ G+L L + +P+ +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+ AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 154 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
+ APE + T SDV+SFGV+L E+ SL P +
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 256
Query: 306 KEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
K + R + + P + T C P RPT S +V L +L
Sbjct: 257 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL-------DGTQGHKEWMAEI 131
+ + + LGEG F VYK + Q VA+K + L DG ++ + EI
Sbjct: 12 YEKLDFLGEGQFATVYKA------RDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALREI 63
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
L +L HP+++ L+ + LV+++M + + S L S L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL--EVIIKDNSLVLTPSHIKAYMLMT 121
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+GL +LH +++RD K +N+LLD + KL+DFGLAK G + T+
Sbjct: 122 LQGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVTRW 177
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELL 280
Y APE + + + D+++ G +L ELL
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHK-EWMAEIIFLGQLR---H 139
+GEG +G V+K LK G + VA+K + + G +G + E+ L L H
Sbjct: 19 IGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 140 PHLVKLIGYCW----EEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P++V+L C + E +L LV+E++ + L L + +P T + +G
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
L FLH V++RD K NIL+ S KL+DFGLA+ +T V+ T Y A
Sbjct: 133 LDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWYRA 187
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
PE ++ T D++S G + E+ K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFL 134
N+ +G+G F V + + L + VAVK +D L+ T K E+ +
Sbjct: 16 NYRLQKTIGKGNFAKV------KLARHVLTGREVAVKIIDKTQLNPTSLQK-LFREVRIM 68
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK- 193
L HP++VKL E+ LV EY G + + L RMK AK
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKF 120
Query: 194 -----GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
+ + H K +++RD KA N+LLD D K++DFG + + G + + G
Sbjct: 121 RQIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK---LDTFCG 175
Query: 249 TQGYAAPE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+ YAAPE + + DV+S GV+L L++G D L
Sbjct: 176 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+GGF ++ + + + A + K+L L Q K M EI L H H+V
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVV 102
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM--KIALGAAKGLAFLHGE 201
G+ + ++ +V E R SL R + P + +I LG +LH
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 158
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYAAPEYVMT 260
VI+RD K N+ L+ D K+ DFGLA K +GE V+ GT Y APE +
Sbjct: 159 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSK 213
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+ DV+S G ++ LL GK + + L
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 244
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 73 RLITSNFSRSNLLGEGGFGPVY----KGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
R+ ++F+ +LG+G FG V KG DE + + V ++ D++ T M
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECT------M 389
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSL--HNQLFRSYSAALPWSTRM 185
E L P + + C++ RL V EY+ G L H Q +
Sbjct: 390 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA 449
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR 245
+IA+G L FL + K +IYRD K N++LDS+ K++DFG+ K E V T+
Sbjct: 450 EIAIG----LFFL--QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTK 500
Query: 246 VM-GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT Y APE + D ++FGV+L E+L G+
Sbjct: 501 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+GGF ++ + + + A + K+L L Q K M EI L H H+V
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVV 104
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM--KIALGAAKGLAFLHGE 201
G+ + ++ +V E R SL R + P + +I LG +LH
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 160
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYAAPEYVMT 260
VI+RD K N+ L+ D K+ DFGLA K +GE V+ GT Y APE +
Sbjct: 161 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSK 215
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+ DV+S G ++ LL GK + + L
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 246
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM--AEIIFLGQLRHPHL 142
+G+G FG V++G + VAVK ++ + W AEI LRH ++
Sbjct: 11 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 59
Query: 143 VKLIGY------CWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
+ I W + + LV +Y GSL + L R Y+ + +K+AL A GLA
Sbjct: 60 LGFIAADNKDNGTWTQLW--LVSDYHEHGSLFDYLNR-YTVTV--EGMIKLALSTASGLA 114
Query: 197 FLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI--TRVMG 248
LH E KP I +RD K+ NIL+ + T ++D GLA +T I +G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 249 TQGYAAPEY----VMTGHLTTM--SDVYSFGVVLLEL 279
T+ Y APE + H + +D+Y+ G+V E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM--AEIIFLGQLRHPHL 142
+G+G FG V++G + VAVK ++ + W AEI LRH ++
Sbjct: 12 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 60
Query: 143 VKLIGY------CWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
+ I W + + LV +Y GSL + L R Y+ + +K+AL A GLA
Sbjct: 61 LGFIAADNKDNGTWTQLW--LVSDYHEHGSLFDYLNR-YTVTV--EGMIKLALSTASGLA 115
Query: 197 FLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI--TRVMG 248
LH E KP I +RD K+ NIL+ + T ++D GLA +T I +G
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 249 TQGYAAPEY----VMTGHLTTM--SDVYSFGVVLLEL 279
T+ Y APE + H + +D+Y+ G+V E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+GGF ++ + + + A + K+L L Q K M EI L H H+V
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVV 78
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM--KIALGAAKGLAFLHGE 201
G+ + ++ +V E R SL R + P + +I LG +LH
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 134
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYAAPEYVMT 260
VI+RD K N+ L+ D K+ DFGLA K +GE V+ GT Y APE +
Sbjct: 135 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSK 189
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+ DV+S G ++ LL GK + + L
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM-AEIIFLGQLRHPHLV 143
LG G FG V+ V+E+ GLE +K ++ D +Q E + AEI L L HP+++
Sbjct: 30 LGSGAFGDVH--LVEER-SSGLER---VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYS--AALPWSTRMKIALGAAKGLAFLHGE 201
K+ + +V E G L ++ + + AL ++ LA+ H +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 202 DKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
V+++D K NIL K+ DFGLA+ E + T GT Y APE V
Sbjct: 144 H--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPE-V 197
Query: 259 MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARP 303
+T D++S GVV+ LLTG T L Q A + P
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM--AEIIFLGQLRHPHL 142
+G+G FG V++G + VAVK ++ + W AEI LRH ++
Sbjct: 17 IGKGRFGEVWRG--------KWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENI 65
Query: 143 VKLIGY------CWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
+ I W + + LV +Y GSL + L R Y+ + +K+AL A GLA
Sbjct: 66 LGFIAADNKDNGTWTQLW--LVSDYHEHGSLFDYLNR-YTVTV--EGMIKLALSTASGLA 120
Query: 197 FLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI--TRVMG 248
LH E KP I +RD K+ NIL+ + T ++D GLA +T I +G
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 180
Query: 249 TQGYAAPEY----VMTGHLTTM--SDVYSFGVVLLEL 279
T+ Y APE + H + +D+Y+ G+V E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHK-EWMAEIIFLGQLR---H 139
+GEG +G V+K LK G + VA+K + + G +G + E+ L L H
Sbjct: 19 IGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 140 PHLVKLIGYCW----EEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P++V+L C + E +L LV+E++ + L L + +P T + +G
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
L FLH V++RD K NIL+ S KL+DFGLA+ +T V+ T Y A
Sbjct: 133 LDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWYRA 187
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
PE ++ T D++S G + E+ K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM--AEIIFLGQLRHPHL 142
+G+G FG V++G + VAVK ++ + W AEI LRH ++
Sbjct: 14 IGKGRFGEVWRG--------KWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENI 62
Query: 143 VKLIGY------CWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
+ I W + + LV +Y GSL + L R Y+ + +K+AL A GLA
Sbjct: 63 LGFIAADNKDNGTWTQLW--LVSDYHEHGSLFDYLNR-YTVTV--EGMIKLALSTASGLA 117
Query: 197 FLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI--TRVMG 248
LH E KP I +RD K+ NIL+ + T ++D GLA +T I +G
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 177
Query: 249 TQGYAAPEY----VMTGHLTTM--SDVYSFGVVLLEL 279
T+ Y APE + H + +D+Y+ G+V E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHK-EWMAEIIFLGQLR---H 139
+GEG +G V+K LK G + VA+K + + G +G + E+ L L H
Sbjct: 19 IGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 140 PHLVKLIGYCW----EEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P++V+L C + E +L LV+E++ + L L + +P T + +G
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
L FLH V++RD K NIL+ S KL+DFGLA+ +T V+ T Y A
Sbjct: 133 LDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWYRA 187
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
PE ++ T D++S G + E+ K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKE 126
+A+L + N+ +G+G F V + + L + VAVK +D + ++
Sbjct: 1 MADLHI--GNYRLLKTIGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQK 52
Query: 127 WMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
E+ + L HP++VKL E+ LV EY G + + Y A W + K
Sbjct: 53 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD-----YLVAHGW-MKEK 106
Query: 187 IALGAAKGL--AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVIT 244
A + + A + K +++RD KA N+LLD+D K++DFG + + G +
Sbjct: 107 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 166
Query: 245 RVMGTQGYAAPE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
G+ YAAPE + + DV+S GV+L L++G D L
Sbjct: 167 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 211
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL---DLDGTQGHKEWMAE 130
+ + + +LG+G FG V K + Q AVK + + + + E
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 131 IIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRM 185
+ L QL HP++ KL + ++ Y LV E G L +++ F AA
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA------- 129
Query: 186 KIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHV 242
+I G+ + H +++RD K N+LL+S D ++ DFGL+ E +
Sbjct: 130 RIIRQVLSGITYXHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKK 184
Query: 243 ITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+GT Y APE V+ G DV+S GV+L LL+G
Sbjct: 185 XKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPG-LEAQPVAVKALDLDGTQGHK--EWMAEIIFLGQLRHPH 141
+G GGF V KL L + VA+K +D T G EI L LRH H
Sbjct: 18 IGTGGFAKV-------KLACHILTGEMVAIKIMD-KNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
+ +L +V EY P G L + + S TR+ + +A++H +
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYII-SQDRLSEEETRV-VFRQIVSAVAYVHSQ 127
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM-T 260
+RD K N+L D + KL DFGL P+G + + + G+ YAAPE +
Sbjct: 128 G--YAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDN 288
+L + +DV+S G++L L+ G D+
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWM 128
+ L ++FS ++G GGFG VY + + A+K LD + QG +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 129 AEIIFLGQLRH---PHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRS--YSAALPWS 182
E I L + P +V + Y + +L + + M G LH L + +S A
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHV 242
+I LG H ++ V+YRD K +NILLD ++SD GLA D + ++ H
Sbjct: 297 YAAEIILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHA 349
Query: 243 ITRVMGTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTG 282
+GT GY APE + G + +D +S G +L +LL G
Sbjct: 350 ---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWM 128
+ L ++FS ++G GGFG VY + + A+K LD + QG +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 129 AEIIFLGQLRH---PHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRS--YSAALPWS 182
E I L + P +V + Y + +L + + M G LH L + +S A
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHV 242
+I LG H ++ V+YRD K +NILLD ++SD GLA D + ++ H
Sbjct: 297 YAAEIILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHA 349
Query: 243 ITRVMGTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTG 282
+GT GY APE + G + +D +S G +L +LL G
Sbjct: 350 ---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 73 RLITSNFSRSNLLGEGGFGPVY----KGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
R+ ++F+ +LG+G FG V KG DE + + V ++ D++ T M
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECT------M 68
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
E L P + + C++ RL V EY+ G L + + P +
Sbjct: 69 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY-- 126
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
A A GL FL + K +IYRD K N++LDS+ K++DFG+ K E V T+
Sbjct: 127 AAEIAIGLFFL--QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXF 181
Query: 248 -GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT Y APE + D ++FGV+L E+L G+
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F L+G GGFG V+K K ++ + +K + + + +E A L +L
Sbjct: 12 DFKEIELIGSGGFGQVFKA------KHRIDGKTYVIKRVKYNNEKAEREVKA----LAKL 61
Query: 138 RHPHLVKLIGYCWE-----------------EEYRLLVYEYMPRGSLHNQLFRSYSAALP 180
H ++V G CW+ + + E+ +G+L + + L
Sbjct: 62 DHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 181 WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA----KDGPE 236
+++ KG+ ++H K +I RD K SNI L K+ DFGL DG
Sbjct: 121 KVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 237 GEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELL 280
R GT Y +PE + + D+Y+ G++L ELL
Sbjct: 179 -------XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWM 128
+ L ++FS ++G GGFG VY + + A+K LD + QG +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 129 AEIIFLGQLRH---PHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRS--YSAALPWS 182
E I L + P +V + Y + +L + + M G LH L + +S A
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHV 242
+I LG H ++ V+YRD K +NILLD ++SD GLA D + ++ H
Sbjct: 297 YAAEIILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHA 349
Query: 243 ITRVMGTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTG 282
+GT GY APE + G + +D +S G +L +LL G
Sbjct: 350 ---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWM 128
+ L ++FS ++G GGFG VY + + A+K LD + QG +
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYG------CRKADTGKMYAMKCLDKKRIKMKQGETLAL 236
Query: 129 AEIIFLGQLRH---PHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRS--YSAALPWS 182
E I L + P +V + Y + +L + + M G LH L + +S A
Sbjct: 237 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 295
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHV 242
+I LG H ++ V+YRD K +NILLD ++SD GLA D + ++ H
Sbjct: 296 YAAEIILGLE------HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHA 348
Query: 243 ITRVMGTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTG 282
+GT GY APE + G + +D +S G +L +LL G
Sbjct: 349 ---SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH--KEWMAEIIFLGQLRHPH 141
+LG+G FG V K K + Q AVK ++ + + E+ L +L HP+
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIALGAAKGLA 196
++KL + +V E G L +++ F + AA +I G+
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGIT 135
Query: 197 FLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
++H + +++RD K NILL+S D K+ DFGL+ + T + R+ GT Y
Sbjct: 136 YMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE V+ G DV+S GV+L LL+G
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH--KEWMAEIIFLGQLRHPH 141
+LG+G FG V K K + Q AVK ++ + + E+ L +L HP+
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIALGAAKGLA 196
++KL + +V E G L +++ F + AA +I G+
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGIT 135
Query: 197 FLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
++H + +++RD K NILL+S D K+ DFGL+ + T + R+ GT Y
Sbjct: 136 YMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE V+ G DV+S GV+L LL+G
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLG 135
N+ +G+G F V + + L + VAVK +D + ++ E+ +
Sbjct: 15 NYRLLKTIGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK-- 193
L HP++VKL E+ LV EY G + + L RMK AK
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 194 ----GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
+ + H K +++RD KA N+LLD+D K++DFG + + G + G+
Sbjct: 121 QIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GS 175
Query: 250 QGYAAPE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
YAAPE + + DV+S GV+L L++G D L
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLG 135
N+ +G+G F V + + L + VAVK +D + ++ E+ +
Sbjct: 15 NYRLLKTIGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK-- 193
L HP++VKL E+ LV EY G + + L RMK AK
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 194 ----GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
+ + H K +++RD KA N+LLD+D K++DFG + + G + G+
Sbjct: 121 QIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GS 175
Query: 250 QGYAAPE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
YAAPE + + DV+S GV+L L++G D L
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--DLDGTQGHKEWMAEII 132
+ + + +GEG +G V+K + Q VA+K D K + EI
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFK------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIR 54
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
L QL+HP+LV L+ + LV+EY LH Y +P I
Sbjct: 55 MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTL 112
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DGPEGEETHVITRVMGTQ 250
+ + F H + I+RD K NIL+ KL DFG A+ GP + + T+
Sbjct: 113 QAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP----SDYYDDEVATR 166
Query: 251 GYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTG 282
Y +PE ++ DV++ G V ELL+G
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL-DGTQGHK-EWMAEI 131
+ TS + +G G +G VYK + VA+K++ + +G +G + E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPISTVREV 54
Query: 132 IFLGQLR---HPHLVKLIGYCW----EEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWST 183
L +L HP++V+L+ C + E ++ LV+E++ + L L ++ LP T
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAET 113
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
+ +GL FLH +++RD K NIL+ S T KL+DFGLA+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMAL 168
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+ T Y APE ++ T D++S G + E+ K
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 68 TLAEL---RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKA-LDLDGTQG 123
LAE+ + +F LG+G FG VY EK + A V K+ L+ +G +
Sbjct: 3 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVE- 59
Query: 124 HKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWST 183
+ EI LRHP+++++ Y + + L+ E+ PRG L+ +L + S
Sbjct: 60 -HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
L A L + H ++ VI+RD K N+L+ K++DFG + P +
Sbjct: 119 TFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LR 169
Query: 244 TRVM-GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDN 288
R M GT Y PE + D++ GV+ E L G D+
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+GGF ++ + + + A + K+L L Q K M EI L H H+V
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVV 80
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM--KIALGAAKGLAFLHGE 201
G+ + ++ +V E R SL R + P + +I LG +LH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 136
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYAAPEYVMT 260
VI+RD K N+ L+ D K+ DFGLA K +GE + GT Y APE +
Sbjct: 137 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVLSK 191
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+ DV+S G ++ LL GK + + L
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE---WMAE-II 132
S+F ++G+G FG V + E AVK L KE M+E +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLA------RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV 91
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
L ++HP LV L + V +Y+ G L L R P + + +A
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA 151
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
L +LH + ++YRD K NILLDS L+DFGL K+ E T + GT Y
Sbjct: 152 --LGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEY 205
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE + D + G VL E+L G
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLG 135
N+ +G+G F V + + L + VAV+ +D + ++ E+ +
Sbjct: 15 NYRLLKTIGKGNFAKV------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK-- 193
L HP++VKL E+ LV EY G + + L RMK AK
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 194 ----GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
+ + H K +++RD KA N+LLD+D K++DFG + + G + + G+
Sbjct: 121 QIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGS 175
Query: 250 QGYAAPE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
YAAPE + + DV+S GV+L L++G D L
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+GGF ++ + + + A + K+L L Q K M EI L H H+V
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVV 84
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM--KIALGAAKGLAFLHGE 201
G+ + ++ +V E R SL R + P + +I LG +LH
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 140
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYAAPEYVMT 260
VI+RD K N+ L+ D K+ DFGLA K +GE + GT Y APE +
Sbjct: 141 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVLSK 195
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+ DV+S G ++ LL GK + + L
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLG 135
N+ +G+G F V + + L + VAVK +D + ++ E+ +
Sbjct: 15 NYRLLKTIGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK-- 193
L HP++VKL E+ LV EY G + + L RMK AK
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 194 ----GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
+ + H K +++RD KA N+LLD+D K++DFG + + G + G
Sbjct: 121 QIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC---GA 175
Query: 250 QGYAAPE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
YAAPE + + DV+S GV+L L++G D L
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL-DGTQGHK-EWMAEI 131
+ TS + +G G +G VYK + VA+K++ + +G +G + E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPISTVREV 54
Query: 132 IFLGQLR---HPHLVKLIGYCW----EEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWST 183
L +L HP++V+L+ C + E ++ LV+E++ + L L ++ LP T
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAET 113
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
+ +GL FLH +++RD K NIL+ S T KL+DFGLA+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMAL 168
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+ T Y APE ++ T D++S G + E+ K
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 68 TLAEL---RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKA-LDLDGTQG 123
LAE+ + +F LG+G FG VY EK + A V K+ L+ +G +
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVE- 58
Query: 124 HKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWST 183
+ EI LRHP+++++ Y + + L+ E+ PRG L+ +L + S
Sbjct: 59 -HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
L A L + H ++ VI+RD K N+L+ K++DFG + P +
Sbjct: 118 TFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LR 168
Query: 244 TRVM-GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDN 288
R M GT Y PE + D++ GV+ E L G D+
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 26/216 (12%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEII 132
RL+ ++ + +GEG G V + + VAVK +DL Q + E++
Sbjct: 44 RLLLDSYVK---IGEGSTGIVCLA------REKHSGRQVAVKMMDLRKQQRRELLFNEVV 94
Query: 133 FLGQLRHPHLVKLI-GYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
+ +H ++V++ Y EE +L+ E++ G+L + + + +T + L A
Sbjct: 95 IMRDYQHFNVVEMYKSYLVGEELWVLM-EFLQGGALTDIVSQVRLNEEQIATVCEAVLQA 153
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGEETHVITRVM 247
LA+LH + VI+RD K+ +ILL D KLSDFG ++KD P+ + ++
Sbjct: 154 ---LAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX------LV 202
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
GT + APE + T D++S G++++E++ G+
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LG+GGF ++ + + + A + K+L L Q K M EI L H H+V
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVV 80
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM--KIALGAAKGLAFLHGE 201
G+ + ++ +V E R SL R + P + +I LG +LH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN 136
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGLA-KDGPEGEETHVITRVMGTQGYAAPEYVMT 260
VI+RD K N+ L+ D K+ DFGLA K +GE + GT Y APE +
Sbjct: 137 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVLSK 191
Query: 261 GHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
+ DV+S G ++ LL GK + + L
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 111 VAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQ 170
VAVK +DL Q + E++ + H ++V + + +V E++ G+L +
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 171 LFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGL 230
+ + +T + L + L++LH + VI+RD K+ +ILL SD KLSDFG
Sbjct: 133 VTHTRMNEEQIAT---VCLSVLRALSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGF 187
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+E ++GT + APE + T D++S G++++E++ G+
Sbjct: 188 CAQ--VSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA---- 129
+ TS + +G G +G VYK + VA+K++ + G +
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 130 -EIIFLGQLR---HPHLVKLIGYCW----EEEYRL-LVYEYMPRGSLHNQLFRSYSAALP 180
E+ L +L HP++V+L+ C + E ++ LV+E++ + L L ++ LP
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 118
Query: 181 WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
T + +GL FLH +++RD K NIL+ S T KL+DFGLA+
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 173
Query: 241 HVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
+T V+ T Y APE ++ T D++S G + E+ K
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLG 135
N+ +G+G F V + + L + VAV+ +D + ++ E+ +
Sbjct: 15 NYRLLKTIGKGNFAKV------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK-- 193
L HP++VKL E+ LV EY G + + L RMK AK
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 194 ----GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
+ + H K +++RD KA N+LLD+D K++DFG + + G + G+
Sbjct: 121 QIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GS 175
Query: 250 QGYAAPE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
YAAPE + + DV+S GV+L L++G D L
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 68 TLAEL---RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKA-LDLDGTQG 123
LAE+ + +F LG+G FG VY EK + A V K+ L+ +G +
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVE- 58
Query: 124 HKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWST 183
+ EI LRHP+++++ Y + + L+ E+ PRG L+ +L + S
Sbjct: 59 -HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
L A L + H ++ VI+RD K N+L+ K++DFG + P +
Sbjct: 118 TFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC 173
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDN 288
GT Y PE + D++ GV+ E L G D+
Sbjct: 174 ----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 85 LGEGGFGPVYKG-------FVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+GEG +G VYK F +K++ LE + + + + EI L +L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR--LEKEDEGIPSTTI----------REISILKEL 57
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
+H ++VKL ++ +LV+E++ + +L L T L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG--PEGEETHVITRVMGTQGYAAP 255
H D+ V++RD K N+L++ + K++DFGLA+ P + TH I T Y AP
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAP 169
Query: 256 EYVM-TGHLTTMSDVYSFGVVLLELLTG 282
+ +M + +T D++S G + E++ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL-DGTQGHK-EWMAEI 131
+ TS + +G G +G VYK + VA+K++ + +G +G + E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPISTVREV 54
Query: 132 IFLGQLR---HPHLVKLIGYCW----EEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWST 183
L +L HP++V+L+ C + E ++ LV+E++ + L L ++ LP T
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAET 113
Query: 184 RMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI 243
+ +GL FLH +++RD K NIL+ S T KL+DFGLA+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMAL 168
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+ T Y APE ++ T D++S G + E+ K
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 21/219 (9%)
Query: 72 LRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEI 131
L++ ++ ++G G FG V V K + A + K + + W
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQ--LVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW----STRMKI 187
I + P +V+L +++Y +V EYMP G L N L +Y W + + +
Sbjct: 128 I-MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVL 185
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
AL A + +H RD K N+LLD KL+DFG E H T V
Sbjct: 186 ALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 248 GTQGYAAPEYVMT----GHLTTMSDVYSFGVVLLELLTG 282
GT Y +PE + + G+ D +S GV L E+L G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 45/225 (20%)
Query: 88 GGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAE--IIFLGQLRHPHLVKL 145
G FG V+K L + VAVK + Q + W E + L ++H ++++
Sbjct: 35 GRFGCVWKA--------QLLNEYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQF 83
Query: 146 IGYCWEEEYR--------LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
IG E R L+ + +GSL + L + + W+ IA A+GLA+
Sbjct: 84 IG----AEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAY 136
Query: 198 LHGED--------KPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
LH ED KP I +RD K+ N+LL ++ TA ++DFGLA G+ +G
Sbjct: 137 LH-EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 249 TQGYAAPEYVMTGHLTTMS------DVYSFGVVLLELLTGKRAMD 287
T+ Y APE V+ G + D+Y+ G+VL EL + A D
Sbjct: 196 TRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 54/237 (22%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+F L+G GGFG V+K K ++ + ++ + + + +E A L +L
Sbjct: 13 DFKEIELIGSGGFGQVFKA------KHRIDGKTYVIRRVKYNNEKAEREVKA----LAKL 62
Query: 138 RHPHLVKLIGYCWE---------------EEYR---------------LLVYEYMPRGSL 167
H ++V G CW+ +Y + E+ +G+L
Sbjct: 63 DHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 168 HNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSD 227
+ + L +++ KG+ ++H K +I+RD K SNI L K+ D
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 228 FGLA----KDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELL 280
FGL DG TR GT Y +PE + + D+Y+ G++L ELL
Sbjct: 180 FGLVTSLKNDGKR-------TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 124 HKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWS 182
H+E EI L L HP+++KL +++Y LV E+ G L Q+ R +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYT---AKLSDFGLAKDGPEGEE 239
MK L G+ +LH + +++RD K NILL++ + K+ DFGL+ +
Sbjct: 150 NIMKQILS---GICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLS---SFFSK 201
Query: 240 THVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ + +GT Y APE V+ DV+S GV++ LL G
Sbjct: 202 DYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFL 134
N+ +G+G F V + + L + VA+K +D L+ T K E+ +
Sbjct: 13 NYRLLKTIGKGNFAKV------KLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIM 65
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
L HP++VKL E+ L+ EY G + + L ++ R K
Sbjct: 66 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFR-QIVSA 123
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
+ + H K +++RD KA N+LLD+D K++DFG + + G + G+ YAA
Sbjct: 124 VQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAA 178
Query: 255 PE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
PE + + DV+S GV+L L++G D L
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQLRHPHLV 143
LG GGFG V + + + VA+K + + ++E W EI + +L HP++V
Sbjct: 22 LGTGGFGYVLRWIHQDT------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 144 KL------IGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALPWSTRMKIALGAAKGL 195
+ + LL EY G L L F + R ++ + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 134
Query: 196 AFLHGEDKPVIYRDFKASNILLD---SDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+LH + +I+RD K NI+L K+ D G AK+ +GE + T +GT Y
Sbjct: 135 RYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQY 189
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTGKR 284
APE + T D +SFG + E +TG R
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 85 LGEGGFGPVYKG-------FVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+GEG +G VYK F +K++ LE + + + + EI L +L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR--LEKEDEGIPSTTI----------REISILKEL 57
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
+H ++VKL ++ +LV+E++ + +L L T L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG--PEGEETHVITRVMGTQGYAAP 255
H D+ V++RD K N+L++ + K++DFGLA+ P + TH + T Y AP
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAP 169
Query: 256 EYVM-TGHLTTMSDVYSFGVVLLELLTG 282
+ +M + +T D++S G + E++ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQLRHPHLV 143
LG GGFG V + + + VA+K + + ++E W EI + +L HP++V
Sbjct: 23 LGTGGFGYVLRWIHQDT------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 144 KL------IGYCWEEEYRLLVYEYMPRGSLHNQL--FRSYSAALPWSTRMKIALGAAKGL 195
+ + LL EY G L L F + R ++ + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 135
Query: 196 AFLHGEDKPVIYRDFKASNILLD---SDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+LH + +I+RD K NI+L K+ D G AK+ +GE + T +GT Y
Sbjct: 136 RYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQY 190
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTGKR 284
APE + T D +SFG + E +TG R
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLG 135
N+ +G+G F V + + L + VAVK +D + ++ E+
Sbjct: 15 NYRLLKTIGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXK 68
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
L HP++VKL E+ LV EY G + + L ++ R K +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFR-QIVSAV 126
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
+ H K +++RD KA N+LLD+D K++DFG + + G + + G YAAP
Sbjct: 127 QYCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAP 181
Query: 256 E-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
E + + DV+S GV+L L++G D L
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 85 LGEGGFGPVYKG-------FVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+GEG +G VYK F +K++ LE + + + + EI L +L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR--LEKEDEGIPSTTI----------REISILKEL 57
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
+H ++VKL ++ +LV+E++ + +L L T L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG--PEGEETHVITRVMGTQGYAAP 255
H D+ V++RD K N+L++ + K++DFGLA+ P + TH + T Y AP
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAP 169
Query: 256 EYVM-TGHLTTMSDVYSFGVVLLELLTG 282
+ +M + +T D++S G + E++ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
I + ++LG G F V D++ + + + +A KAL+ G +G E EI L
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKKALE--GKEGSME--NEIAVL 70
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAK 193
+++HP++V L + L+ + + G L +++ + + S + L A K
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 194 GLAFLHGEDKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
+LH D +++RD K N+L LD D +SDFGL+K G V++ GT
Sbjct: 131 ---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GY APE + + D +S GV+ LL G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 111 VAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSL--- 167
VAVK +DL Q + E++ + +H ++V++ + +V E++ G+L
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 168 --HNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKL 225
H ++ AA + L + L+ LH + VI+RD K+ +ILL D KL
Sbjct: 239 VTHTRMNEEQIAA--------VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKL 288
Query: 226 SDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
SDFG +E ++GT + APE + D++S G++++E++ G+
Sbjct: 289 SDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 49/299 (16%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEIIFLGQ 136
++ ++G G V + K + VA+K ++L+ Q E + EI + Q
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPK------KEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSY------SAALPWSTRMKIALG 190
HP++V ++ LV + + GS+ + + S L ST I
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA---KDGPEGEETHVITRVM 247
+GL +LH + I+RD KA NILL D + +++DFG++ G + V +
Sbjct: 130 VLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 248 GTQGYAAPEYV--MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
GT + APE + + G+ +D++SFG+ +EL TG A P
Sbjct: 188 GTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG------------------AAPYH 228
Query: 306 KEPRKLERLID-----PRLEGQFPIKGAQKAAATAFK-----CLSHHPRHRPTMSYVVR 354
K P ++ P LE K K +F+ CL P RPT + ++R
Sbjct: 229 KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD---LDGTQGHKEWMAEIIFL 134
N+ +G+G F V + + L + VA+K +D L+ T K E+ +
Sbjct: 16 NYRLLKTIGKGNFAKV------KLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIM 68
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
L HP++VKL E+ L+ EY G + + L ++ R K
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFR-QIVSA 126
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
+ + H K +++RD KA N+LLD+D K++DFG + + G + G YAA
Sbjct: 127 VQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAA 181
Query: 255 PE-YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRL 291
PE + + DV+S GV+L L++G D L
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 57/310 (18%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLG 135
S+F +LG+G FG V K + L+++ A+K + + ++E++ L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKIR-HTEEKLSTILSEVMLLA 57
Query: 136 QLRHPHLVKLIGYCWEEEYRL--------------LVYEYMPRGSLHNQLFRSYSAALPW 181
L H ++V+ W E + EY G+L++ L S +
Sbjct: 58 SLNHQYVVRYYA-AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQR 115
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEE-- 239
++ + L+++H + +I+RD K NI +D K+ DFGLAK+ +
Sbjct: 116 DEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 240 ----------THVITRVMGTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELL----TGKR 284
+ +T +GT Y A E + TGH D+YS G++ E++ TG
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGME 233
Query: 285 AMDNTRLGREQSLA---EWARPLLKEPRKLERLI---DPRLE---------GQFPIKGAQ 329
++ + R S+ ++ +K +K+ RL+ DP G P+K
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
Query: 330 KAAATAFKCL 339
+ A K L
Sbjct: 294 EVIKEALKSL 303
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 38/237 (16%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM--AE 130
R + + +G+G +G V++G + VAVK ++ + W E
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGL--------WHGESVAVKIF---SSRDEQSWFRETE 52
Query: 131 IIFLGQLRHPHLVKLIGYCWEEEYR----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
I LRH +++ I L+ Y GSL++ L R L ++
Sbjct: 53 IYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ---TLEPHLALR 109
Query: 187 IALGAAKGLAFLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
+A+ AA GLA LH E KP I +RDFK+ N+L+ S+ ++D GLA +G +
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDY 169
Query: 241 HVITR--VMGTQGYAAPEYVMTGHLTT-------MSDVYSFGVVLLELLTGKRAMDN 288
I +GT+ Y APE V+ + T +D+++FG+VL E+ +R + N
Sbjct: 170 LDIGNNPRVGTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVN 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 29/241 (12%)
Query: 54 DLSNSVIGSKLHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAV 113
++ N + K + + +LR+ ++ ++G G FG V V K + A +
Sbjct: 46 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLS 103
Query: 114 KALDLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFR 173
K + + W I + P +V+L ++ Y +V EYMP G L N L
Sbjct: 104 KFEMIKRSDSAFFWEERDI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMS 161
Query: 174 SYSAALPW----STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFG 229
+Y W + + +AL A + F+H RD K N+LLD KL+DFG
Sbjct: 162 NYDVPEKWARFYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFG 213
Query: 230 ----LAKDGPEGEETHVITRVMGTQGYAAPEYVMT----GHLTTMSDVYSFGVVLLELLT 281
+ K+G +T V GT Y +PE + + G+ D +S GV L E+L
Sbjct: 214 TCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268
Query: 282 G 282
G
Sbjct: 269 G 269
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 49/299 (16%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ-GHKEWMAEIIFLGQ 136
++ ++G G V + K + VA+K ++L+ Q E + EI + Q
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPK------KEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSY------SAALPWSTRMKIALG 190
HP++V ++ LV + + GS+ + + S L ST I
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA---KDGPEGEETHVITRVM 247
+GL +LH + I+RD KA NILL D + +++DFG++ G + V +
Sbjct: 125 VLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 248 GTQGYAAPEYV--MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLL 305
GT + APE + + G+ +D++SFG+ +EL TG A P
Sbjct: 183 GTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG------------------AAPYH 223
Query: 306 KEPRKLERLID-----PRLEGQFPIKGAQKAAATAFK-----CLSHHPRHRPTMSYVVR 354
K P ++ P LE K K +F+ CL P RPT + ++R
Sbjct: 224 KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 139/324 (42%), Gaps = 54/324 (16%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM--AE 130
R I +G+G +G V+ G + VAVK T W E
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMG--------KWRGEKVAVKVF---FTTEEASWFRETE 81
Query: 131 IIFLGQLRHPHLVKLIGY------CWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR 184
I +RH +++ I W + Y L+ +Y GSL++ L S L +
Sbjct: 82 IYQTVLMRHENILGFIAADIKGTGSWTQLY--LITDYHENGSLYDYL---KSTTLDAKSM 136
Query: 185 MKIALGAAKGLAFLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLA-KDGPEG 237
+K+A + GL LH E KP I +RD K+ NIL+ + T ++D GLA K +
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT 196
Query: 238 EETHVI--TRVMGTQGYAAPEY----VMTGHLTT--MSDVYSFGVVLLELLTGKRAMDNT 289
E + TRV GT+ Y PE + H + M+D+YSFG++L E+ +R +
Sbjct: 197 NEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGG 253
Query: 290 RLGREQ----SLAEWARPLLKEPRKLERLIDPRLEGQFPIKGA-----QKAAATAFKCLS 340
+ Q L + P ++ R++ + +L FP + + ++ +C +
Sbjct: 254 IVEEYQLPYHDLVP-SDPSYEDMREI--VCIKKLRPSFPNRWSSDECLRQMGKLMTECWA 310
Query: 341 HHPRHRPTMSYVVRVLDSLQDFQD 364
H+P R T V + L + + QD
Sbjct: 311 HNPASRLTALRVKKTLAKMSESQD 334
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLV-YEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
+ +L HP VKL +C++++ +L Y G L + R + TR A
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 147
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQG 251
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT
Sbjct: 148 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQ 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y +PE + SD+++ G ++ +L+ G
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
+ +LR+ ++ ++G G FG V V K + A + K + + W
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW----STR 184
I + P +V+L ++ Y +V EYMP G L N L +Y W +
Sbjct: 124 ERDI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGEET 240
+ +AL A + F+H RD K N+LLD KL+DFG + K+G +T
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 241 HVITRVMGTQGYAAPEYVMT----GHLTTMSDVYSFGVVLLELLTG 282
V GT Y +PE + + G+ D +S GV L E+L G
Sbjct: 234 AV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
+ +LR+ ++ ++G G FG V V K + A + K + + W
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW----STR 184
I + P +V+L ++ Y +V EYMP G L N L +Y W +
Sbjct: 124 ERDI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFG----LAKDGPEGEET 240
+ +AL A + F+H RD K N+LLD KL+DFG + K+G +T
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 241 HVITRVMGTQGYAAPEYVMT----GHLTTMSDVYSFGVVLLELLTG 282
V GT Y +PE + + G+ D +S GV L E+L G
Sbjct: 234 AV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG G V V + VAVK +DL Q + E++ + +H ++V+
Sbjct: 37 IGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 145 LIGYCWEEEYRLLVYEYMPRGSL-----HNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ + +V E++ G+L H ++ AA + L + L+ LH
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCLAVLQALSVLH 142
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
+ VI+RD K+ +ILL D KLSDFG +E ++GT + APE +
Sbjct: 143 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 198
Query: 260 TGHLTTMSDVYSFGVVLLELLTGK 283
D++S G++++E++ G+
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG G V V + VAVK +DL Q + E++ + +H ++V+
Sbjct: 39 IGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 145 LIGYCWEEEYRLLVYEYMPRGSL-----HNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ + +V E++ G+L H ++ AA + L + L+ LH
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCLAVLQALSVLH 144
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
+ VI+RD K+ +ILL D KLSDFG +E ++GT + APE +
Sbjct: 145 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 200
Query: 260 TGHLTTMSDVYSFGVVLLELLTGK 283
D++S G++++E++ G+
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 111 VAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSL--- 167
VAVK +DL Q + E++ + +H ++V++ + +V E++ G+L
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 168 --HNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKL 225
H ++ AA + L + L+ LH + VI+RD K+ +ILL D KL
Sbjct: 162 VTHTRMNEEQIAA--------VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKL 211
Query: 226 SDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
SDFG +E ++GT + APE + D++S G++++E++ G+
Sbjct: 212 SDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
I + ++LG G F V D++ + + + +A +AL+ G +G E EI L
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALE--GKEGSME--NEIAVL 70
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAK 193
+++HP++V L + L+ + + G L +++ + + S + L A K
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 194 GLAFLHGEDKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
+LH D +++RD K N+L LD D +SDFGL+K G V++ GT
Sbjct: 131 ---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GY APE + + D +S GV+ LL G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG G V V + VAVK +DL Q + E++ + +H ++V+
Sbjct: 28 IGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 145 LIGYCWEEEYRLLVYEYMPRGSL-----HNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ + +V E++ G+L H ++ AA + L + L+ LH
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCLAVLQALSVLH 133
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
+ VI+RD K+ +ILL D KLSDFG +E ++GT + APE +
Sbjct: 134 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 189
Query: 260 TGHLTTMSDVYSFGVVLLELLTGK 283
D++S G++++E++ G+
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
I + ++LG G F V D++ + + + +A +AL+ G +G E EI L
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALE--GKEGSME--NEIAVL 70
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAK 193
+++HP++V L + L+ + + G L +++ + + S + L A K
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 194 GLAFLHGEDKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
+LH D +++RD K N+L LD D +SDFGL+K G V++ GT
Sbjct: 131 ---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GY APE + + D +S GV+ LL G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG G V V + VAVK +DL Q + E++ + +H ++V+
Sbjct: 32 IGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 145 LIGYCWEEEYRLLVYEYMPRGSL-----HNQLFRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ + +V E++ G+L H ++ AA + L + L+ LH
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA--------VCLAVLQALSVLH 137
Query: 200 GEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM 259
+ VI+RD K+ +ILL D KLSDFG +E ++GT + APE +
Sbjct: 138 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 193
Query: 260 TGHLTTMSDVYSFGVVLLELLTGK 283
D++S G++++E++ G+
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
I + ++LG G F V D++ + + + +A +AL+ G +G E EI L
Sbjct: 16 IRDIYDFRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALE--GKEGSME--NEIAVL 70
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAK 193
+++HP++V L + L+ + + G L +++ + + S + L A K
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 194 GLAFLHGEDKPVIYRDFKASNIL---LDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
+LH D +++RD K N+L LD D +SDFGL+K G V++ GT
Sbjct: 131 ---YLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GY APE + + D +S GV+ LL G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + QG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 128
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 183
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + QG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 128
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 183
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + QG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P + ++ R YS A LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 183
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--DLDGTQGHKEWMAEIIFLGQLRHPHL 142
+G G +G V K KP Q +AVK + +D + + M + + P++
Sbjct: 30 IGRGAYGSVNKMV----HKPS--GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 143 VKLIGYCWEEEYRLLVYEYMPRG--SLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
V+ G + E + E M + ++ +P KI L K L L
Sbjct: 84 VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK- 142
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI--TRVMGTQGYAAPEYV 258
E+ +I+RD K SNILLD KL DFG++ G+ I TR G + Y APE +
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPERI 197
Query: 259 MTGH----LTTMSDVYSFGVVLLELLTGK 283
SDV+S G+ L EL TG+
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR 138
F + G+G FG V G K VA+K + D ++E + + L L
Sbjct: 25 FQVERMAGQGTFGTVQLG------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLH 77
Query: 139 HPHLVKLIGYCW-------EEEYRLLVYEYMPRGSLHNQLFRSYSAAL-PWSTRMKIAL- 189
HP++V+L Y + + Y +V EY+P +LH Y + P +K+ L
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLD-SDYTAKLSDFGLAKDGPEGEETHVITRVMG 248
+ + LH V +RD K N+L++ +D T KL DFG AK E +
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN---VAYIC 193
Query: 249 TQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + H TT D++S G + E++ G+
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG +G V+K K + E + LD D + EI L +L+H ++V+
Sbjct: 10 IGEGTYGTVFKA----KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L ++ LV+E+ + + F S + L KGL F H +
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
V++RD K N+L++ + KL+DFGLA+ G + + T Y P+ + L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 265 TMS-DVYSFGVVLLELLTGKRAM 286
+ S D++S G + EL R +
Sbjct: 180 STSIDMWSAGCIFAELANAARPL 202
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 23 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 137 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 70
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 128
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 183
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 78
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 136
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 137 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 191
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 192 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 30 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 144 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 23 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 137 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 31 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 84
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 85 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 144
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 145 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 22 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 75
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 76 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 135
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 136 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKE-WMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRF 82
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+ Y AP
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
+++ +GEG +G V + + VA+K + Q + + + EI L +
Sbjct: 45 YTQLQYIGEGAYGMVSSAY------DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF 98
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSY-SAALPWSTRMKIALGAAKGLA 196
RH +++ + + Y+ + + L++ S L +GL
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLK 158
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+L+++ K+ DFGLA+ PE + T +T + T+ Y AP
Sbjct: 159 YIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 70
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 128
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 183
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 89
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 147
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 148 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 202
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 203 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 71
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 129
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 130 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 184
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 185 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 70
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 128
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 183
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 82
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 140
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 141 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 195
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 82
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 140
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 141 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 195
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 83
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 141
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 142 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 196
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 197 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 57/310 (18%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLG 135
S+F +LG+G FG V K + L+++ A+K + + ++E++ L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKIR-HTEEKLSTILSEVMLLA 57
Query: 136 QLRHPHLVKLIGYCWEEEYRL--------------LVYEYMPRGSLHNQLFRSYSAALPW 181
L H ++V+ W E + EY +L++ L S +
Sbjct: 58 SLNHQYVVRYYA-AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQR 115
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEE-- 239
++ + L+++H + +I+RD K NI +D K+ DFGLAK+ +
Sbjct: 116 DEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 240 ----------THVITRVMGTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELL----TGKR 284
+ +T +GT Y A E + TGH D+YS G++ E++ TG
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGME 233
Query: 285 AMDNTRLGREQSLA---EWARPLLKEPRKLERLI---DPRLE---------GQFPIKGAQ 329
++ + R S+ ++ +K +K+ RL+ DP G P+K
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
Query: 330 KAAATAFKCL 339
+ A K L
Sbjct: 294 EVIKEALKSL 303
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 120
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 121 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 177
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 200
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 74
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 132
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 133 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 187
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 98
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 156
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 157 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 211
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 212 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 121
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 122 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 178
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 75
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 133
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 134 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 188
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 189 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 119
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 120 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 176
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 104
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 162
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 163 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 217
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 118
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 119 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 175
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK-EWMAEIIFLGQLRHPHLV 143
LGEG + VYKG K L VA+K + L+ +G + E+ L L+H ++V
Sbjct: 10 LGEGTYATVYKG------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 144 KLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
L E+ LV+EY+ + Q + +GLA+ H +
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKDL--KQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK- 120
Query: 204 PVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVM-TGH 262
V++RD K N+L++ KL+DFGLA+ + T + T Y P+ ++ +
Sbjct: 121 -VLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 263 LTTMSDVYSFGVVLLELLTGK 283
+T D++ G + E+ TG+
Sbjct: 178 YSTQIDMWGVGCIFYEMATGR 198
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 104
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 162
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 163 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 217
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 125
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 126 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 182
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 200
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 143 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 108
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 166
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 167 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 221
Query: 248 GTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 222 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 198
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 149
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 207
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 208 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 262
Query: 248 GTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 263 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 106
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + +E Y LV +Y+P ++ R YS A LP
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 164
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 165 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYI 219
Query: 248 GTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 220 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 198
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 144
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ + V GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 201
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 140
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ + V GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 197
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 198
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQG 251
+GL ++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T +T + T+
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 252 YAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
Y APE ++ T S D++S G +L E+L+ +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 200
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NAFVGTAQY 198
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 200
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 140
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 197
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 144
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 201
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 142/351 (40%), Gaps = 57/351 (16%)
Query: 64 LHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQG 123
L L+ LR F L+G G +G VYKG +K G Q A+K +D+ G +
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---RHVKTG---QLAAIKVMDVTGDE- 63
Query: 124 HKEWMAEIIFLGQL-RHPHLVKLIGYCWE------EEYRLLVYEYMPRGSLHNQLFRSYS 176
+E EI L + H ++ G + ++ LV E+ GS+ + + +
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG 123
Query: 177 AALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DG 234
L I +GL+ LH VI+RD K N+LL + KL DFG++ D
Sbjct: 124 NTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181
Query: 235 PEGEETHVITRVMGTQGYAAPEYVMTGH-----LTTMSDVYSFGVVLLELLTGKRAMDNT 289
G I GT + APE + SD++S G+ +E+ G + +
Sbjct: 182 TVGRRNTFI----GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
Query: 290 RLGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
R L PR PRL+ + K ++K + CL + RP
Sbjct: 238 HP---------MRALFLIPRNPA----PRLKSK---KWSKKFQSFIESCLVKNHSQRPAT 281
Query: 350 SYVVRVLDSLQDFQDSFVGPFVYVVPNETESSVYLRNGKETNSEEESGEKN 400
+++ PF+ PNE + + L++ + ++++ GEK+
Sbjct: 282 EQLMK-------------HPFIRDQPNERQVRIQLKDHID-RTKKKRGEKD 318
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 200
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 146
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 147 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 203
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVI 243
+++ A + L F H +I+RD K +NIL+ + K+ DFG+A+ G
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+GT Y +PE + SDVYS G VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
++ + R LG G +G V +K+ A + K T + + + E+ L
Sbjct: 35 LSEMYQRVKKLGSGAYGEVL--LCRDKVTHVERAIKIIRKTSV--STSSNSKLLEEVAVL 90
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIAL 189
L HP+++KL + ++ LV E G L +++ F AA+ I
Sbjct: 91 KLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIK 143
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRV 246
G+ +LH + +++RD K N+LL+S D K+ DFGL+ E +
Sbjct: 144 QVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKER 198
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+GT Y APE V+ DV+S GV+L LL G
Sbjct: 199 LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLG 135
+ N+ LG+G F V + V + A+ + K L + ++ E
Sbjct: 28 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICR 83
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAKG 194
+L+HP++V+L EE + LV++ + G L + R + + S ++ L +
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ES 140
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+A+ H +++R+ K N+LL S KL+DFGLA + + E H GT G
Sbjct: 141 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPG 195
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y +PE + + D+++ GV+L LL G
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 80 SRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRH 139
S++ +LG G FG V+K E+ GL+ +A K + G + +E EI + QL H
Sbjct: 92 SKTEILGGGRFGQVHKC---EETATGLK---LAAKIIKTRGMKDKEEVKNEISVMNQLDH 145
Query: 140 PHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYS-AALPWSTRMKIALGAAKGLAF 197
+L++L + +LV EY+ G L +++ SY+ L MK +G+
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRH 202
Query: 198 LHGEDKPVIYRDFKASNIL-LDSDYTA-KLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
+H +++ D K NIL ++ D K+ DFGLA+ E+ V GT + AP
Sbjct: 203 MH--QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAP 257
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTG 282
E V ++ +D++S GV+ LL+G
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
+ +L HP VKL ++E Y G L + R + TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVITRVMGTQGY 252
L +LHG K +I+RD K NILL+ D +++DFG AK PE ++ +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQY 200
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR 138
++ ++G G FG V++ KL +E+ VA+K + D ++E I ++
Sbjct: 42 YTNCKVIGNGSFGVVFQA----KL---VESDEVAIKKVLQDKRFKNRELQIMRI----VK 90
Query: 139 HPHLVKLIGYCW------EEEYRLLVYEYMP----RGSLHNQLFRSYSAALPWSTRMKIA 188
HP++V L + + +E + LV EY+P R S H + L M
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGEETHVITRVM 247
L + LA++H + +RD K N+LLD KL DFG AK GE +
Sbjct: 151 L---RSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSXI 202
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + + TT D++S G V+ EL+ G+
Sbjct: 203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 29 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T + + T+ Y AP
Sbjct: 143 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-KEWMAEIIFLGQL 137
++ + +GEG +G V + L VA+K + Q + + + EI L +
Sbjct: 30 YTNLSYIGEGAYGMVCSAY------DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 138 RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL-GAAKGLA 196
RH +++ + + Y+ + + L++ + + L +GL
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDG-PEGEETHVITRVMGTQGYAAP 255
++H + V++RD K SN+LL++ K+ DFGLA+ P+ + T + + T+ Y AP
Sbjct: 144 YIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 256 EYVMTGHLTTMS-DVYSFGVVLLELLTGK 283
E ++ T S D++S G +L E+L+ +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLG 135
+ N+ LG+G F V + V + A+ + K L + ++ E
Sbjct: 5 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICR 60
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAKG 194
+L+HP++V+L EE + LV++ + G L + R + + S ++ L +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ES 117
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+A+ H +++R+ K N+LL S KL+DFGLA + + E H GT G
Sbjct: 118 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPG 172
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y +PE + + D+++ GV+L LL G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLG 135
+ N+ LG+G F V + V + A+ + K L + ++ E
Sbjct: 4 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICR 59
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAKG 194
+L+HP++V+L EE + LV++ + G L + R + + S ++ L +
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ES 116
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+A+ H +++R+ K N+LL S KL+DFGLA + + E H GT G
Sbjct: 117 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPG 171
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y +PE + + D+++ GV+L LL G
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 45/217 (20%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD--LDGTQGHKEWMAEIIFLGQLRHPHL 142
+G G +G V +D++ + VA+K L K E++ L ++H ++
Sbjct: 32 VGSGAYGSVCSA-IDKR-----SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW-STRMKIALGAA--------- 192
+ L+ + P SL N F + +P+ T ++ +G
Sbjct: 86 IGLLDV------------FTPASSLRN--FYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL 131
Query: 193 -----KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
KGL ++H V++RD K N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 132 VYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-- 187
Query: 248 GTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
Y APE +++ H D++S G ++ E+LTGK
Sbjct: 188 ---WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+GEG +G V+K K + E + LD D + EI L +L+H ++V+
Sbjct: 10 IGEGTYGTVFKA----KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L ++ LV+E+ + + F S + L KGL F H +
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 205 VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLT 264
V++RD K N+L++ + KL++FGLA+ G + + T Y P+ + L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 265 TMS-DVYSFGVVLLELLTGKRAM 286
+ S D++S G + EL R +
Sbjct: 180 STSIDMWSAGCIFAELANAGRPL 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
+ N+ LG+G F V + V + A+ + K L + ++ E
Sbjct: 4 FSDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARIC 59
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAK 193
+L+HP++V+L EE + LV++ + G L + R + + S ++ L +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---E 116
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
+A+ H +++R+ K N+LL S KL+DFGLA + + E H GT
Sbjct: 117 SIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTP 171
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GY +PE + + D+++ GV+L LL G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQP-VAVKALDLDGTQGHKEWMAEIIFLGQLRHPHL 142
+LG+G +G VY G L Q +A+K + ++ + EI L+H ++
Sbjct: 29 VLGKGTYGIVYAG-------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK---GLAFLH 199
V+ +G E + + E +P GSL + L RS L I + GL +LH
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLK-DNEQTIGFYTKQILEGLKYLH 139
Query: 200 GEDKPVIYRDFKASNILLDSDYTA--KLSDFG----LAKDGPEGEETHVITRVMGTQGYA 253
D +++RD K N+L+++ Y+ K+SDFG LA P E GT Y
Sbjct: 140 --DNQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTE------TFTGTLQYM 190
Query: 254 APEYVMTG--HLTTMSDVYSFGVVLLELLTGK 283
APE + G +D++S G ++E+ TGK
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVI 243
+++ A + L F H +I+RD K +NI++ + K+ DFG+A+ G
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+GT Y +PE + SDVYS G VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVI 243
+++ A + L F H +I+RD K +NI++ + K+ DFG+A+ G
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+GT Y +PE + SDVYS G VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVI 243
+++ A + L F H +I+RD K +NI++ + K+ DFG+A+ G
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+GT Y +PE + SDVYS G VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVI 243
+++ A + L F H +I+RD K +NI++ + K+ DFG+A+ G
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+GT Y +PE + SDVYS G VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 45/217 (20%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD--LDGTQGHKEWMAEIIFLGQLRHPHL 142
+G G +G V +D++ + VA+K L K E++ L ++H ++
Sbjct: 50 VGSGAYGSVCSA-IDKR-----SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPW-STRMKIALGAA--------- 192
+ L+ + P SL N F + +P+ T ++ +G
Sbjct: 104 IGLLDV------------FTPASSLRN--FYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL 149
Query: 193 -----KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
KGL ++H V++RD K N+ ++ D K+ DFGLA+ +V+TR
Sbjct: 150 VYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-- 205
Query: 248 GTQGYAAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
Y APE +++ H D++S G ++ E+LTGK
Sbjct: 206 ---WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 26/209 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G F VYKG E +E ++ L ++ + + E L L+HP++V+
Sbjct: 34 IGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQR-FKEEAEXLKGLQHPNIVR 89
Query: 145 LIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALP----WSTRMKIALGAAKGL 195
WE + +LV E G+L L R + W ++ KGL
Sbjct: 90 FYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGL 142
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
FLH P+I+RD K NI + + K+ D GLA + V+GT + A
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPEFXA 198
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
PE + ++ DVY+FG LE T +
Sbjct: 199 PEXYEEKYDESV-DVYAFGXCXLEXATSE 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 78 NFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQL 137
+++ + ++G G FG VY+ + + + VA+K + D ++E + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKVLQDKRFKNRELQ----IMRKL 70
Query: 138 RHPHLVKLIGYCW------EEEYRLLVYEYMPRGSLHNQLFRSYSAA---LPWSTRMKIA 188
H ++V+L + + + Y LV +Y+P ++ R YS A LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYM 128
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA-KLSDFGLAKDGPEGEETHVITRVM 247
+ LA++H + +RD K N+LLD D KL DFG AK GE +
Sbjct: 129 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXI 183
Query: 248 GTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++ Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 139 HPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
HP++++L + LV++ M +G L + L + L KI + + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 127
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
H + +++RD K NILLD D KL+DFG + GE+ + V GT Y APE +
Sbjct: 128 HKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEII 182
Query: 259 MTGHLTTMS------DVYSFGVVLLELLTG 282
D++S GV++ LL G
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD-GPEGEETHVI 243
+++ A + L F H +I+RD K +NI++ + K+ DFG+A+ G
Sbjct: 136 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 244 TRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
V+GT Y +PE + SDVYS G VL E+LTG+
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 139 HPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
HP++++L + LV++ M +G L + L + L KI + + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
H + +++RD K NILLD D KL+DFG + GE+ + V GT Y APE +
Sbjct: 141 HKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEII 195
Query: 259 MTGHLTTMS------DVYSFGVVLLELLTG 282
D++S GV++ LL G
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +T + T+ Y
Sbjct: 165 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWY 217
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V++ +K AVK + L+ + + E++ L P +V
Sbjct: 80 LGRGSFGEVHR------MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVP 128
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G E + + E + GSL QL + LP + A +GL +LH +
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSL-GQLIKQM-GCLPEDRALYYLGQALEGLEYLH--TRR 184
Query: 205 VIYRDFKASNILLDSDYT-AKLSDFGLAKD-GPEGEETHVIT--RVMGTQGYAAPEYVMT 260
+++ D KA N+LL SD + A L DFG A P+G ++T + GT+ + APE VM
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 261 GHLTTMSDVYSFGVVLLELLTG 282
D++S ++L +L G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 16/217 (7%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-----KEWM 128
L + ++G+G F V + E Q AVK +D+ ++
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRET------GQQFAVKIVDVAKFTSSPGLSTEDLK 74
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIA 188
E L+HPH+V+L+ + +V+E+M L ++ + A +S +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA---KLSDFGLAKDGPEGEETHVITR 245
A + D +I+RD K N+LL S + KL DFG+A GE V
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGG 192
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+GT + APE V DV+ GV+L LL+G
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +T + T+ Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWY 194
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 139 HPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
HP++++L + LV++ M +G L + L + L KI + + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
H + +++RD K NILLD D KL+DFG + GE+ + V GT Y APE +
Sbjct: 141 HKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRSVCGTPSYLAPEII 195
Query: 259 MTGHLTTMS------DVYSFGVVLLELLTG 282
D++S GV++ LL G
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 195
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 135 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 187
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 107/270 (39%), Gaps = 33/270 (12%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGT--QGHKEWMAEIIFLGQLRHPHL 142
+G G G V+K ++ +AVK + G + + M + L P++
Sbjct: 33 MGSGTCGQVWK------MRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGED 202
V+ G + E M G+ +L + +P K+ + K L +L E
Sbjct: 87 VQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK-EK 143
Query: 203 KPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
VI+RD K SNILLD KL DFG++ + + R G Y APE +
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGCAAYMAPERIDPPD 200
Query: 263 LT-----TMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLERLIDP 317
T +DV+S G+ L+EL TG+ N + E + L +EP P
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV----LTKVLQEEP--------P 248
Query: 318 RLEGQFPIKGAQKAAATAFKCLSHHPRHRP 347
L G G ++ CL+ R RP
Sbjct: 249 LLPGHMGFSGDFQSFVK--DCLTKDHRKRP 276
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRHPHL 142
LG+G F V + L Q A K ++ + H++ E L+HP++
Sbjct: 30 LGKGAFSVV------RRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAKGLAFLHGE 201
V+L EE + L+++ + G L + R Y + S ++ L A LH
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----LHCH 138
Query: 202 DKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
V++RD K N+LL S KL+DFGLA + EGE+ GT GY +PE +
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQAWFG-FAGTPGYLSPEVL 196
Query: 259 MTGHLTTMSDVYSFGVVLLELLTG 282
D+++ GV+L LL G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +T + T+ Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWY 194
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 146 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +T + T+ Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WY 211
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQP-VAVKALDLDGTQGHKEWMAEIIFLGQLRHPHL 142
+LG+G +G VY G L Q +A+K + ++ + EI L+H ++
Sbjct: 15 VLGKGTYGIVYAG-------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 143 VKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK---GLAFLH 199
V+ +G E + + E +P GSL + L RS L I + GL +LH
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLK-DNEQTIGFYTKQILEGLKYLH 125
Query: 200 GEDKPVIYRDFKASNILLDSDYTA--KLSDFG----LAKDGPEGEETHVITRVMGTQGYA 253
D +++RD K N+L+++ Y+ K+SDFG LA P E GT Y
Sbjct: 126 --DNQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTE------TFTGTLQYM 176
Query: 254 APEYVMTG--HLTTMSDVYSFGVVLLELLTGK 283
APE + G +D++S G ++E+ TGK
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 211
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 48/289 (16%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRHPHL 142
L E G ++KG + + VK L + T+ +++ E L HP++
Sbjct: 18 LNENHSGELWKG--------RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 143 VKLIGYCWEEE--YRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
+ ++G C + L+ + P GSL+N L + + S +K AL A+G AFLH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT 129
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLS--DFGLAKDGPEGEETHVITRVMGTQGYAAPEYV 258
+ + + ++ +D D TA++S D + P G + APE +
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP-GRXY--------APAWVAPEAL 180
Query: 259 MTGHLTT---MSDVYSFGVVLLELLTGKRA---MDNTRLGREQSLAEWARPLLKEPRKLE 312
T +D +SF V+L EL+T + + N +G + +L E RP +
Sbjct: 181 QKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVAL-EGLRPTIPP----- 234
Query: 313 RLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSLQD 361
I P + I C + P RP +V +L+ QD
Sbjct: 235 -GISPHVSKLXKI------------CXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 134 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 186
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG+G F V + K+ G E + + L + H++ E L+HP++V+
Sbjct: 19 LGKGAFSVVRRCV---KVLAGQEYAAMIINTKKLSA-RDHQKLEREARICRLLKHPNIVR 74
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAKGLAFLHGEDK 203
L EE + L+++ + G L + R Y + S ++ L A LH
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----LHCHQM 129
Query: 204 PVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMT 260
V++R+ K N+LL S KL+DFGLA + EGE+ GT GY +PE +
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQAWFG-FAGTPGYLSPEVLRK 187
Query: 261 GHLTTMSDVYSFGVVLLELLTG 282
D+++ GV+L LL G
Sbjct: 188 DPYGKPVDLWACGVILYILLVG 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V++ E + G + AVK + L+ + E++ L P +V
Sbjct: 101 LGRGSFGEVHR---MEDKQTGFQC---AVKKVRLEVFRAE-----ELMACAGLTSPRIVP 149
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G E + + E + GSL QL + LP + A +GL +LH +
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSL-GQLVKE-QGCLPEDRALYYLGQALEGLEYLH--SRR 205
Query: 205 VIYRDFKASNILLDSDYT-AKLSDFGLAKD-GPEGEETHVIT--RVMGTQGYAAPEYVMT 260
+++ D KA N+LL SD + A L DFG A P+G ++T + GT+ + APE V+
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 261 GHLTTMSDVYSFGVVLLELLTG 282
DV+S ++L +L G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R +G G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EYMP G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D K++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R +G G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EYMP G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D K++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V++ E + G + AVK + L+ + E++ L P +V
Sbjct: 82 LGRGSFGEVHR---MEDKQTGFQC---AVKKVRLEVFRAE-----ELMACAGLTSPRIVP 130
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G E + + E + GSL QL + LP + A +GL +LH +
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSL-GQLVKE-QGCLPEDRALYYLGQALEGLEYLH--SRR 186
Query: 205 VIYRDFKASNILLDSDYT-AKLSDFGLAKD-GPEGEETHVIT--RVMGTQGYAAPEYVMT 260
+++ D KA N+LL SD + A L DFG A P+G ++T + GT+ + APE V+
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 261 GHLTTMSDVYSFGVVLLELLTG 282
DV+S ++L +L G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V++ +K AVK + L+ + + E++ L P +V
Sbjct: 66 VGRGSFGEVHR------MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVP 114
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G E + + E + GSL QL + LP + A +GL +LH +
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSL-GQLIKQM-GCLPEDRALYYLGQALEGLEYLH--TRR 170
Query: 205 VIYRDFKASNILLDSDYT-AKLSDFGLAKD-GPEGEETHVIT--RVMGTQGYAAPEYVMT 260
+++ D KA N+LL SD + A L DFG A P+G ++T + GT+ + APE VM
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 261 GHLTTMSDVYSFGVVLLELLTG 282
D++S ++L +L G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD--LDGTQGHKEWMAEIIFLGQLRHPHL 142
+G G +G V F K GL VAVK L K E+ L ++H ++
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 143 VKLI-----GYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
+ L+ EE + + ++ L+N + S L + +GL +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KSQKLTDDHVQFLIYQILRGLKY 140
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
+H D +I+RD K SN+ ++ D K+ DFGL + + +V TR Y APE
Sbjct: 141 IHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEI 193
Query: 258 VMTG-HLTTMSDVYSFGVVLLELLTGK 283
++ H D++S G ++ ELLTG+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW---MAEIIFLG 135
F R LG G FG V + + ++ G A+K LD KE + E L
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
+ P LVKL + +V EY P G + + L R + P + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGY 252
+LH D +IYRD K N+++D K++DFGLAK V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE +++ D ++ GV++ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V++ +K AVK + L+ + + E++ L P +V
Sbjct: 82 VGRGSFGEVHR------MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVP 130
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L G E + + E + GSL QL + LP + A +GL +LH +
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSL-GQLIKQM-GCLPEDRALYYLGQALEGLEYLH--TRR 186
Query: 205 VIYRDFKASNILLDSDYT-AKLSDFGLAKD-GPEGEETHVIT--RVMGTQGYAAPEYVMT 260
+++ D KA N+LL SD + A L DFG A P+G ++T + GT+ + APE VM
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 261 GHLTTMSDVYSFGVVLLELLTG 282
D++S ++L +L G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 184
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WY 208
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 39/225 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH---KEWMAEIIFLGQLR-HP 140
LG+G +G V+K +D + + VAVK + D Q + EI+ L +L H
Sbjct: 17 LGKGAYGIVWKS-IDRR-----TGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 141 HLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
++V L+ + R LV++YM LH + + L + + K + +L
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVI---RANILEPVHKQYVVYQLIKVIKYL 125
Query: 199 HGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK-----------------DGPEG--EE 239
H +++RD K SNILL+++ K++DFGL++ + E ++
Sbjct: 126 HS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 240 THVITRVMGTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLTGK 283
++T + T+ Y APE ++ + T D++S G +L E+L GK
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALD--LDGTQGHKEWMAEIIFLGQLRHPHL 142
+G G +G V + D +L+ Q VAVK L + E+ L L+H ++
Sbjct: 36 VGSGAYGSVCSAY-DARLR-----QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 143 VKLIGYC--------WEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
+ L+ + E Y LV M G+ N + +S AL + +G
Sbjct: 90 IGLLDVFTPATSIEDFSEVY--LVTTLM--GADLNNIVKS--QALSDEHVQFLVYQLLRG 143
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
L ++H +I+RD K SN+ ++ D ++ DFGLA+ E +V TR Y A
Sbjct: 144 LKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRA 196
Query: 255 PEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
PE ++ H D++S G ++ ELL GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ D+GLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
P LVKL Y +++ L +V EY+P G + + L R + P + A
Sbjct: 101 -----PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVL 152
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQ 250
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 153 TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 64 LHVFTLAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLE--AQPVAVKALDLDGT 121
L+ +A T ++ LG+G F V + K P E A+ + K L
Sbjct: 18 LYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCV---KKTPTQEYAAKIINTKKL---SA 71
Query: 122 QGHKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALP 180
+ H++ E L+HP++V+L EE + LV++ + G L + R Y +
Sbjct: 72 RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 131
Query: 181 WSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEG 237
S + L + + +H D +++RD K N+LL S KL+DFGLA + +G
Sbjct: 132 ASHCIHQIL---ESVNHIHQHD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQG 185
Query: 238 EETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
E+ GT GY +PE + D+++ GV+L LL G
Sbjct: 186 EQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 38/232 (16%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLG 135
S+F +LG+G FG V K + L+++ A+K + + ++E+ L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKIR-HTEEKLSTILSEVXLLA 57
Query: 136 QLRHPHLVKLIGYCWEEEYRL--------------LVYEYMPRGSLHNQLFRSYSAALPW 181
L H ++V+ W E + EY +L++ L S +
Sbjct: 58 SLNHQYVVRYYA-AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQR 115
Query: 182 STRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEE-- 239
++ + L+++H + +I+R+ K NI +D K+ DFGLAK+ +
Sbjct: 116 DEYWRLFRQILEALSYIHSQG--IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 240 ----------THVITRVMGTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELL 280
+ +T +GT Y A E + TGH D YS G++ E +
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
P LVKL Y +++ L +V EY+P G + + L R + P + A
Sbjct: 101 -----PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVL 152
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQ 250
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 153 TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 207 VAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRK 310
+ APE + T SDV+SFGV+L E+ SL P +K +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKIDEE 309
Query: 311 LERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
R + + P + T C P RPT S +V L +L
Sbjct: 310 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAK 193
P LVKL Y +++ L +V EY+P G + + L R + P + A
Sbjct: 101 -----PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVL 152
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQ 250
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 153 TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 209 VAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRK 310
+ APE + T SDV+SFGV+L E+ SL P +K +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKIDEE 311
Query: 311 LERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
R + + P + T C P RPT S +V L +L
Sbjct: 312 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRK 310
+ APE + T SDV+SFGV+L E+ SL P +K +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKIDEE 304
Query: 311 LERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
R + + P + T C P RPT S +V L +L
Sbjct: 305 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H +I+RD K SN+ ++ D ++ DFGLA+ E +V TR Y
Sbjct: 134 RGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELL GK
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
AKG+ FL + I+RD A NILL K+ DFGLA+D + +
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRK 310
+ APE + T SDV+SFGV+L E+ SL P +K +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKIDEE 302
Query: 311 LERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVRVLDSL 359
R + + P + T C P RPT S +V L +L
Sbjct: 303 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVIT 244
+ I + A+ + FLH K +++RD K SNI D K+ DFGL + EE +
Sbjct: 167 LHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 245 RVM----------GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELL 280
M GT+ Y +PE + + + D++S G++L ELL
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH---- 124
+AEL + S ++ + G +G V G VD E PVA+K + + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAG-VDS------EGIPVAIKRVFNTVSDGRTVNI 66
Query: 125 -------KEWMAEIIFLGQLRHPHLVKL--IGYCWEEEYRLLVYEYMPRGSLHNQLFRSY 175
K + EI L HP+++ L I +EE M + L +L R+
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA-------MHKLYLVTELMRTD 119
Query: 176 SAALPWSTRMKIALGAAK--------GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSD 227
A + R+ I+ + GL LH + V++RD NILL + + D
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHPGNILLADNNDITICD 177
Query: 228 FGLAK-DGPEGEETHVITRVMGTQGYAAPEYVMTGH-LTTMSDVYSFGVVLLELLTGK 283
F LA+ D + +TH +T + Y APE VM T + D++S G V+ E+ K
Sbjct: 178 FNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 99
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R + P + A
Sbjct: 100 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQI 151
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 152 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPE 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 77 SNFSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMA 129
F R LG G FG V + + ++ G L+ Q V VK ++ T K +
Sbjct: 27 DQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQ 82
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
+ F P LVKL + +V EY+P G + + L R + P + A
Sbjct: 83 AVNF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AA 134
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
+LH D +IYRD K N+L+D +++DFG AK T + GT
Sbjct: 135 QIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGT 187
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH---- 124
+AEL + S ++ + G +G V G VD E PVA+K + + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAG-VDS------EGIPVAIKRVFNTVSDGRTVNI 66
Query: 125 -------KEWMAEIIFLGQLRHPHLVKL--IGYCWEEEYRLLVYEYMPRGSLHNQLFRSY 175
K + EI L HP+++ L I +EE M + L +L R+
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA-------MHKLYLVTELMRTD 119
Query: 176 SAALPWSTRMKIALGAAK--------GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSD 227
A + R+ I+ + GL LH + V++RD NILL + + D
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHPGNILLADNNDITICD 177
Query: 228 FGLAK-DGPEGEETHVITRVMGTQGYAAPEYVMTGH-LTTMSDVYSFGVVLLELLTGK 283
F LA+ D + +TH +T + Y APE VM T + D++S G V+ E+ K
Sbjct: 178 FNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR 138
F +LG GGFG V+ + K + + G QG M E L ++
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV- 242
Query: 139 HPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA--AKGL 195
H + + Y +E + L LV M G + ++ + I A GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
LH + +IYRD K N+LLD D ++SD GLA + G+ GT G+ AP
Sbjct: 303 EHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGK 283
E ++ D ++ GV L E++ +
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H +I+RD K SN+ ++ D ++ DFGLA+ E +V TR Y
Sbjct: 142 RGLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELL GK
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR 138
F +LG GGFG V+ + K + + G QG M E L ++
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV- 242
Query: 139 HPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA--AKGL 195
H + + Y +E + L LV M G + ++ + I A GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
LH + +IYRD K N+LLD D ++SD GLA + G+ GT G+ AP
Sbjct: 303 EHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGK 283
E ++ D ++ GV L E++ +
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR 138
F +LG GGFG V+ + K + + G QG M E L ++
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV- 242
Query: 139 HPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA--AKGL 195
H + + Y +E + L LV M G + ++ + I A GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
LH + +IYRD K N+LLD D ++SD GLA + G+ GT G+ AP
Sbjct: 303 EHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGK 283
E ++ D ++ GV L E++ +
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 11/208 (5%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR 138
F +LG GGFG V+ + K + + G QG M E L ++
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKV- 242
Query: 139 HPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA--AKGL 195
H + + Y +E + L LV M G + ++ + I A GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
LH + +IYRD K N+LLD D ++SD GLA + G+ GT G+ AP
Sbjct: 303 EHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGK 283
E ++ D ++ GV L E++ +
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 101
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+P G + + L R + P + A
Sbjct: 102 -----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 155 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 93
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+P G + + L R + P + A
Sbjct: 94 -----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 146
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 147 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 196
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 101
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+P G + + L R + P + A
Sbjct: 102 -----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 155 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 44/240 (18%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKAL--DLDGTQGHKEWMAEII 132
I + +L+G G +G V + + LE + VA+K + + K + EI
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAY------DKLEKRVVAIKKILRVFEDLIDCKRILREIA 104
Query: 133 FLGQLRHPHLVKLIGYCWE---EEYRLLVYEYMPRGSLHNQLFRS--YSAALPWSTRMKI 187
L +L H H+VK++ E++ L S +LFR+ Y L T +
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYN 164
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK--DGPEGEETHV--- 242
L G+ ++H +++RD K +N L++ D + K+ DFGLA+ D PE + +
Sbjct: 165 LLV---GVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 243 --------------------ITRVMGTQGYAAPEYV-MTGHLTTMSDVYSFGVVLLELLT 281
+T + T+ Y APE + + + T DV+S G + ELL
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 101
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+P G + + L R + P + A
Sbjct: 102 -----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 155 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEW---MAEIIFLG 135
F R LG G FG V + + ++ G A+K LD KE + E L
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 136 QLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGL 195
+ P LVKL + +V EY P G + + L R + P + A
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 196 AFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQGY 252
+LH D +IYRD K N+++D +++DFGLAK V R + GT Y
Sbjct: 155 EYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEY 204
Query: 253 AAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE +++ D ++ GV++ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R +G G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D K++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 101
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY P G + + L R + P + A
Sbjct: 102 -----PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+++D K++DFG AK V R + GT
Sbjct: 155 FEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPE 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 121
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+P G + + L R + P + A
Sbjct: 122 -----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 174
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 175 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 224
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 32/245 (13%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
+ N+ +L+G G +G VY + D+ + + V DL K + EI L
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAY-DKNANKNVAIKKVNRMFEDLIDC---KRILREITIL 81
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--MKIALGAA 192
+L+ ++++L E+ Y+ + L + + + + + I
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLL 141
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVI--------- 243
G F+H + +I+RD K +N LL+ D + K+ DFGLA+ ++ H++
Sbjct: 142 LGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 244 --------------TRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGKRAMDN 288
T + T+ Y APE ++ T S D++S G + ELL ++ N
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 289 TRLGR 293
R
Sbjct: 260 NPTNR 264
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA-EIIF 133
I F LG G F V +EK L AVK + +G + + EI
Sbjct: 20 IKKIFEFKETLGTGAFSEVV--LAEEKATGKL----FAVKCIPKKALKGKESSIENEIAV 73
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAA 192
L +++H ++V L + LV + + G L +++ + + ST ++ L A
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA- 132
Query: 193 KGLAFLHGEDKPVIYRDFKASNILL---DSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
+ +LH +++RD K N+L D + +SDFGL+K +G+ V++ GT
Sbjct: 133 --VYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGT 185
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GY APE + + D +S GV+ LL G
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 99
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R + P + A
Sbjct: 100 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQI 151
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 152 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 201
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 93
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+P G + + L R P + A
Sbjct: 94 -----PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLT 146
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 147 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 196
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + F
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRIQQAVNF- 101
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY P G + + L R + P + A
Sbjct: 102 -----PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D K++DFG AK V R + GT
Sbjct: 155 FEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPE 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY P G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+++D K++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLE--AQPVAVKALDLDGTQGHKEWMAEII 132
+T + +G+G F V + KL G E A+ + K L + H++ E
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCV---KLCTGHEYAAKIINTKKL---SARDHQKLEREAR 55
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGA 191
L+H ++V+L EE + LV++ + G L + R Y + S ++ L A
Sbjct: 56 ICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 115
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMG 248
LH V++RD K N+LL S KL+DFGLA + +G++ G
Sbjct: 116 V-----LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQQAWFG-FAG 168
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T GY +PE + D+++ GV+L LL G
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ FGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH-----NQLFRSYSAALPWSTR 184
EI L +L HP ++K+ + E+Y +V E M G L N+ + + L + +
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 121
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETH 241
M +A+ +LH + +I+RD K N+LL S D K++DFG +K ET
Sbjct: 122 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETS 170
Query: 242 VITRVMGTQGYAAPEYVM---TGHLTTMSDVYSFGVVLLELLTG 282
++ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 36/236 (15%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEII 132
R + + + +G+G +G V++G + + VAVK ++ K W E
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETE 52
Query: 133 FLG--QLRHPHLVKLIGYCWEEEYR----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
LRH +++ I + L+ Y GSL++ L L + ++
Sbjct: 53 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLR 109
Query: 187 IALGAAKGLAFLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
I L A GLA LH E KP I +RD K+ NIL+ + ++D GLA +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 241 HVITR--VMGTQGYAAPEYV-MTGHLTTMS-----DVYSFGVVLLELLTGKRAMDN 288
+ +GT+ Y APE + T + D+++FG+VL E+ +R + N
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH-----NQLFRSYSAALPWSTR 184
EI L +L HP ++K+ + E+Y +V E M G L N+ + + L + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 122
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETH 241
M +A+ +LH + +I+RD K N+LL S D K++DFG +K ET
Sbjct: 123 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETS 171
Query: 242 VITRVMGTQGYAAPEYVM---TGHLTTMSDVYSFGVVLLELLTG 282
++ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ DF LA+ + +T + T+ Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH-----NQLFRSYSAALPWSTR 184
EI L +L HP ++K+ + E+Y +V E M G L N+ + + L + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 122
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETH 241
M +A+ +LH + +I+RD K N+LL S D K++DFG +K ET
Sbjct: 123 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETS 171
Query: 242 VITRVMGTQGYAAPEYVM---TGHLTTMSDVYSFGVVLLELLTG 282
++ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH-----NQLFRSYSAALPWSTR 184
EI L +L HP ++K+ + E+Y +V E M G L N+ + + L + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 122
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETH 241
M +A+ +LH + +I+RD K N+LL S D K++DFG +K ET
Sbjct: 123 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETS 171
Query: 242 VITRVMGTQGYAAPEYVM---TGHLTTMSDVYSFGVVLLELLTG 282
++ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ D GLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLH-----NQLFRSYSAALPWSTR 184
EI L +L HP ++K+ + E+Y +V E M G L N+ + + L + +
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 128
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETH 241
M +A+ +LH + +I+RD K N+LL S D K++DFG +K ET
Sbjct: 129 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETS 177
Query: 242 VITRVMGTQGYAAPEYVM---TGHLTTMSDVYSFGVVLLELLTG 282
++ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 178 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLE--AQPVAVKALDLDGTQGHKEWMAEII 132
+T + LG+G F V + K+ G E A+ + K L + H++ E
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCM---KIPTGQEYAAKIINTKKL---SARDHQKLEREAR 55
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGA 191
L+HP++V+L EE + LV++ + G L + R Y + S ++ L +
Sbjct: 56 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMG 248
H +++RD K N+LL S KL+DFGLA + +G++ G
Sbjct: 116 VN-----HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFG-FAG 168
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T GY +PE + D+++ GV+L LL G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 99
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+P G + + L R P + A
Sbjct: 100 NF------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQI 151
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 152 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 201
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ D GLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY P G + + L R P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+++D K++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIA 188
EI L +L HP ++K+ + E+Y +V E M G L +++ + L +T
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGN--KRLKEATCKLYF 245
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITR 245
+ +LH + +I+RD K N+LL S D K++DFG +K ET ++
Sbjct: 246 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 300
Query: 246 VMGTQGYAAPEYVM---TGHLTTMSDVYSFGVVLLELLTG 282
+ GT Y APE ++ T D +S GV+L L+G
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQ 250
+GL ++H VI+RD K SN+L++ + K+ DFG+A+ E + +T + T+
Sbjct: 170 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 251 GYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGKR 284
Y APE +++ H T + D++S G + E+L ++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLE--AQPVAVKALDLDGTQGHKEWMAEII 132
+T + LG+G F V + K+ G E A+ + K L + H++ E
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCM---KIPTGQEYAAKIINTKKL---SARDHQKLEREAR 55
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGA 191
L+HP++V+L EE + LV++ + G L + R Y + S ++ L +
Sbjct: 56 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSD---YTAKLSDFGLAKDGPEGEETHVITRVMG 248
H +++RD K N+LL S KL+DFGLA + +G++ G
Sbjct: 116 VN-----HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFG-FAG 168
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T GY +PE + D+++ GV+L LL G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIA 188
EI L +L HP ++K+ + E+Y +V E M G L +++ + L +T
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGN--KRLKEATCKLYF 259
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITR 245
+ +LH + +I+RD K N+LL S D K++DFG +K ET ++
Sbjct: 260 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 314
Query: 246 VMGTQGYAAPEYVM---TGHLTTMSDVYSFGVVLLELLTG 282
+ GT Y APE ++ T D +S GV+L L+G
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
+GL ++H D +I+RD K SN+ ++ D K+ D GLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WY 188
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ H D++S G ++ ELLTG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 121
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 122 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 174
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
+LH D +IYRD K N+L+D +++DFG AK T + GT Y A
Sbjct: 175 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLA 227
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTG 282
PE +++ D ++ GV++ E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 45/287 (15%)
Query: 77 SNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLG 135
+ + LLG+GGFG V+ G + ++L+ ++ P + L E+ L
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN-RVLGWSPLSDSVTCPLEVALLW 89
Query: 136 QLR----HPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
++ HP +++L+ + +E +LV E R LF + P
Sbjct: 90 KVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSRCFFG 146
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLD-SDYTAKLSDFG---LAKDGPEGEETHVITRVM 247
A H + V++RD K NIL+D AKL DFG L D P T
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-------YTDFD 199
Query: 248 GTQGYAAPEYVMTGHLTTM-SDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
GT+ Y+ PE++ + + V+S G++L +++ G + R+Q + E
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE-----RDQEILE------- 247
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVV 353
E FP + A +CL+ P RP++ ++
Sbjct: 248 ------------AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEII 132
R + + +G+G +G V++G + + VAVK ++ K W E
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETE 52
Query: 133 FLG--QLRHPHLVKLIGYCWEEEYR----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
LRH +++ I + L+ Y GSL++ L L + ++
Sbjct: 53 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLR 109
Query: 187 IALGAAKGLAFLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
I L A GLA LH E KP I +RD K+ NIL+ + ++D GLA +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 241 HVITR--VMGTQGYAAPEYV-MTGHLTTMS-----DVYSFGVVLLELLTGKRAMDN 288
+ +GT+ Y APE + T + D+++FG+VL E+ +R + N
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 73 RLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEII 132
R + + +G+G +G V++G + + VAVK ++ K W E
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETE 81
Query: 133 FLG--QLRHPHLVKLIGYCWEEEYR----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMK 186
LRH +++ I + L+ Y GSL++ L L + ++
Sbjct: 82 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLR 138
Query: 187 IALGAAKGLAFLHGE-----DKPVI-YRDFKASNILLDSDYTAKLSDFGLAKDGPEGEET 240
I L A GLA LH E KP I +RD K+ NIL+ + ++D GLA +
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 241 HVITR--VMGTQGYAAPEYV-MTGHLTTMS-----DVYSFGVVLLELLTGKRAMDN 288
+ +GT+ Y APE + T + D+++FG+VL E+ +R + N
Sbjct: 199 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 252
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR 138
F + LG G VY+ K +P A+K L T K EI L +L
Sbjct: 55 FEVESELGRGATSIVYR------CKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLS 106
Query: 139 HPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAKGLAF 197
HP+++KL LV E + G L +++ + Y + + +K L A +A+
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEA---VAY 163
Query: 198 LHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAA 254
LH + +++RD K N+L + D K++DFGL+K E ++ V GT GY A
Sbjct: 164 LH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCA 218
Query: 255 PEYVMTGHLTTMSDVYSFGVVLLELLTG 282
PE + D++S G++ LL G
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD--GPEGEETHVITRVMGTQ 250
+GL ++H VI+RD K SN+L++ + K+ DFG+A+ E + +T + T+
Sbjct: 169 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 251 GYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGKR 284
Y APE +++ H T + D++S G + E+L ++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY P G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+++D +++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R A P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
I F +LG G F V+ +K L + A+K + EI L
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFL------VKQRLTGKLFALKCIKKSPAFRDSSLENEIAVL 60
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLF-RSYSAALPWSTRMKIALGAAK 193
+++H ++V L + LV + + G L +++ R S ++ L A K
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK 120
Query: 194 GLAFLHGEDKPVIYRDFKASNILL---DSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQ 250
+LH + +++RD K N+L + + ++DFGL+K E+ +++ GT
Sbjct: 121 ---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTACGTP 171
Query: 251 GYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GY APE + + D +S GV+ LL G
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
KGL ++H +I+RD K N+ ++ D K+ DFGLA+ V+TR Y
Sbjct: 139 KGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WY 191
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELLTGK 283
APE ++ T D++S G ++ E++TGK
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V++ V E+ A + + D KE I + LRHP LV
Sbjct: 59 LGTGAFGVVHR--VTERATGNNFAAKFVMTPHESDKETVRKE----IQTMSVLRHPTLVN 112
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L ++ +++YE+M G L ++ ++ + ++ KGL +H +
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENN-- 169
Query: 205 VIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
++ D K NI+ + + KL DFGL + V T GT +AAPE
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 226
Query: 263 LTTMSDVYSFGVVLLELLTG 282
+ +D++S GV+ LL+G
Sbjct: 227 VGYYTDMWSVGVLSYILLSG 246
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
+ N+ +L+G G +G VY + D+ + + + V DL K + EI L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAY-DKNTEKNVAIKKVNRMFEDLIDC---KRILREITIL 79
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR--MKIALGAA 192
+L+ ++++L ++ Y+ + L + + + + I
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAK------------DGPEGEE- 239
G F+H + +I+RD K +N LL+ D + K+ DFGLA+ D E EE
Sbjct: 140 LGENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 240 ------------THVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTGKRAM 286
+HV+TR Y APE ++ T S D++S G + ELL ++
Sbjct: 198 GPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252
Query: 287 DNTRLGR 293
N R
Sbjct: 253 INDPTNR 259
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 99
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P L KL + +V EY P G + + L R + P + A
Sbjct: 100 NF------PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQI 151
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+++D K++DFG AK V R + G
Sbjct: 152 VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 99
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P L KL + +V EY P G + + L R + P + A
Sbjct: 100 NF------PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQI 151
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+++D K++DFG AK V R + G
Sbjct: 152 VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
+ A+G+ FL + I+RD A NILL + K+ DFGLA+D + +
Sbjct: 205 SFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLT 281
+ APE + +T SDV+S+GV+L E+ +
Sbjct: 263 LPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ EL+ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG G FG V++ V E+ A + + D KE I + LRHP LV
Sbjct: 165 LGTGAFGVVHR--VTERATGNNFAAKFVMTPHESDKETVRKE----IQTMSVLRHPTLVN 218
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKP 204
L ++ +++YE+M G L ++ ++ + ++ KGL +H +
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENN-- 275
Query: 205 VIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGH 262
++ D K NI+ + + KL DFGL + V T GT +AAPE
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 332
Query: 263 LTTMSDVYSFGVVLLELLTG 282
+ +D++S GV+ LL+G
Sbjct: 333 VGYYTDMWSVGVLSYILLSG 352
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E+ + L HP LV L +EE +V + + G L L + T
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEETVKLFIC 122
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
L +L +++ +I+RD K NILLD ++DF +A P ET IT + GT
Sbjct: 123 ELVMALDYL--QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQ-ITTMAGT 177
Query: 250 QGYAAPEYVMT---GHLTTMSDVYSFGVVLLELLTGKR 284
+ Y APE + + D +S GV ELL G+R
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 46/278 (16%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHKEWMAEI-IFLGQLRHPHL 142
LG G +G V EK++ Q +AVK + +Q K + ++ I + + P
Sbjct: 59 LGRGAYGVV------EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 143 VKLIGYCWEEEYRLLVYEYMPRG--SLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
V G + E + E M + Q+ +P KIA+ K L LH
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS 171
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM--GTQGYAAPEYV 258
+ VI+RD K SN+L+++ K+ DFG++ G + + + G + Y APE +
Sbjct: 172 K-LSVIHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDSVAKTIDAGCKPYMAPERI 225
Query: 259 -----MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLER 313
G+ + SD++S G+ ++EL + D+ W P ++L++
Sbjct: 226 NPELNQKGY-SVKSDIWSLGITMIELAILRFPYDS-----------WGTPF----QQLKQ 269
Query: 314 LID---PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
+++ P+L K + + +CL + + RPT
Sbjct: 270 VVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPT 304
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 35/261 (13%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEI-I 132
++ + + GG G +Y L + +PV +K L G +
Sbjct: 77 IVAGQYEVKGCIAHGGLGWIYLA-----LDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQ 131
Query: 133 FLGQLRHPHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKI 187
FL ++ HP +V++ + + +V EY+ SL RS LP + +
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQKLPVAEAIAY 187
Query: 188 ALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM 247
L L++LH ++Y D K NI+L ++ KL D G + +
Sbjct: 188 LLEILPALSYLHSIG--LVYNDLKPENIML-TEEQLKLIDLGAVS------RINSFGYLY 238
Query: 248 GTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMD-NTRLGREQSLAEWARPLLK 306
GT G+ APE V TG T +D+Y+ G L L +D TR GR P+LK
Sbjct: 239 GTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL-----TLDLPTRNGRYVDGLPEDDPVLK 292
Query: 307 E----PRKLERLIDPRLEGQF 323
R L R IDP +F
Sbjct: 293 TYDSYGRLLRRAIDPDPRQRF 313
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 99
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P L KL + +V EY P G + + L R P + A
Sbjct: 100 NF------PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--AAQI 151
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+++D K++DFG AK V R + G
Sbjct: 152 VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 69 LAELRLITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWM 128
L ELRL +L EGGF VY+ + + G E A+K L + + ++ +
Sbjct: 25 LGELRLRVRR-----VLAEGGFAFVYEA---QDVGSGRE---YALKRLLSNEEEKNRAII 73
Query: 129 AEIIFLGQLR-HPHLVKLIGYCW---EE----EYRLLVYEYMPRGSLHNQLFRSYS-AAL 179
E+ F+ +L HP++V+ EE + L+ + +G L L + S L
Sbjct: 74 QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPL 133
Query: 180 PWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLA 231
T +KI + + +H + P+I+RD K N+LL + T KL DFG A
Sbjct: 134 SCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 101
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 102 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 154
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 155 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 204
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 156 LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNI 215
+L+ EY G + + + + + +++ +G+ +LH + +++ D K NI
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNI 162
Query: 216 LLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSF 272
LL S Y K+ DFG+++ E + +MGT Y APE + +TT +D+++
Sbjct: 163 LLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 273 GVVLLELLT 281
G++ LLT
Sbjct: 220 GIIAYMLLT 228
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 87
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 88 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 140
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 141 FEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 190
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ ++T + T+ Y
Sbjct: 136 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYR 190
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNT 289
APE ++ D++S G ++ EL+ G T
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 64 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 172
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A + V +GT Y PE
Sbjct: 173 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 272
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGL-EAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLV 143
LGEGGF +VD L GL + A+K + Q +E E HP+++
Sbjct: 37 LGEGGFS-----YVD--LVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 144 KLIGYCWEE----EYRLLVYEYMPRGSLHNQLFRSYSAA--LPWSTRMKIALGAAKGLAF 197
+L+ YC E L+ + RG+L N++ R L + + LG +GL
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGP---EGEETHVITRVMGTQ---- 250
+H K +RD K +NILL + L D G EG + + Q
Sbjct: 150 IHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 251 GYAAPE-YVMTGH--LTTMSDVYSFGVVLLELLTGKRAMD 287
Y APE + + H + +DV+S G VL ++ G+ D
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 36 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 144
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A + V +GT Y PE
Sbjct: 145 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 199
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 244
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 245 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 88/213 (41%), Gaps = 26/213 (12%)
Query: 77 SNFSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEII 132
F R LG G FG V +K + L+ Q V VK ++ T K + +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 94
Query: 133 FLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
F P LVKL + +V EY+ G + + L R P + A
Sbjct: 95 F------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIV 146
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGT 249
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 147 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 196
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 20 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 73 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 128
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A + V +GT Y PE
Sbjct: 129 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 183
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 184 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 228
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 229 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 271
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 29/247 (11%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
LG GG G V+ VD + VA+K + L Q K + EI + +L H ++VK
Sbjct: 19 LGCGGNGLVFSA-VDNDCD-----KRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 145 L--------------IGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
+ +G E +V EYM L N L L R+
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL--EQGPLLEEHARL-FMYQ 128
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNILLDS-DYTAKLSDFGLAKD-GPEGEETHVITRVMG 248
+GL ++H + V++RD K +N+ +++ D K+ DFGLA+ P ++ +
Sbjct: 129 LLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 249 TQGYAAPEYVMT-GHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKE 307
T+ Y +P +++ + T D+++ G + E+LTGK + L + P++ E
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 308 PRKLERL 314
+ E L
Sbjct: 247 EDRQELL 253
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 17 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 70 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 125
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A + V +GT Y PE
Sbjct: 126 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 180
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 225
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 226 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 268
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPG-------LEAQPVAVKALDLDGTQGHKEWMAEI 131
F R LG G FG V + + ++ G L+ Q V VK ++ T K + +
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAV 98
Query: 132 IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGA 191
F P LVKL + +V EY+ G + + L R + P + A
Sbjct: 99 NF------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQI 150
Query: 192 AKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMG 248
+LH D +IYRD K N+L+D +++DFG AK V R + G
Sbjct: 151 VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 249 TQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T Y APE +++ D ++ GV++ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 121
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R P + A
Sbjct: 122 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLT 174
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 175 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 224
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+++D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQGHKEWM-AEIIFLGQLRHPHL 142
+G G +G +K++ + + + K LD T+ K+ + +E+ L +L+HP++
Sbjct: 14 IGTGSYGRC------QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 143 VKLIGYCWEEEYRLL--VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
V+ + L V EY G L + + + + + LA
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 201 EDKP-----VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
+ V++RD K +N+ LD KL DFGLA+ +T +GT Y +P
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYYMSP 185
Query: 256 EYVMTGHLTTMSDVYSFGVVLLEL 279
E + SD++S G +L EL
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 64 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 172
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A + V +GT Y PE
Sbjct: 173 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 272
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE +++ D ++ GV++ ++ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 36 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 144
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A V +GT Y PE
Sbjct: 145 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEA 199
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 244
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 245 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 124 HKEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSL--HNQLF----RSYSA 177
+ ++ E+ + +++ + + G + ++YEYM S+ ++ F ++Y+
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 178 ALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG 237
+P I +++H E K + +RD K SNIL+D + KLSDFG +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDVKPSNILMDKNGRVKLSDFGES------ 199
Query: 238 EETHVITRVMGTQG---YAAPEYVM--TGHLTTMSDVYSFGVVL 276
E V ++ G++G + PE+ + + D++S G+ L
Sbjct: 200 -EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 16 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 69 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 124
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A + V +GT Y PE
Sbjct: 125 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 179
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 180 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 224
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 225 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 267
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQGHKEWM-AEIIFLGQLRHPHL 142
+G G +G +K++ + + + K LD T+ K+ + +E+ L +L+HP++
Sbjct: 14 IGTGSYGRC------QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 143 VKLIGYCWEEEYRLL--VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
V+ + L V EY G L + + + + + LA
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 201 EDKP-----VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
+ V++RD K +N+ LD KL DFGLA+ +T +GT Y +P
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPYYMSP 185
Query: 256 EYVMTGHLTTMSDVYSFGVVLLEL 279
E + SD++S G +L EL
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ---GHKEWMAEIIFLGQLRHPH 141
LG G F V K EK GLE +K ++ +E E+ L Q+ HP+
Sbjct: 20 LGSGQFAIVKK--CREK-STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L +L+ E + G L + F + +L G+ +LH
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 202 DKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
K + + D K NI LLD + KL DFGLA + +G E + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
V L +D++S GV+ LL+G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ G ++ V+ T+ Y
Sbjct: 140 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVV-TRYYR 194
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE ++ D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 137 LRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLA 196
L+HPH+V+L+ + +V+E+M L ++ + A +S + A
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 197 FLHGEDKPVIYRDFKASNILLDSDYTA---KLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
+ D +I+RD K +LL S + KL FG+A GE V +GT +
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFM 202
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE V DV+ GV+L LL+G
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 16/217 (7%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGH-----KEWM 128
L + ++G+G F V + E Q AVK +D+ ++
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRET------GQQFAVKIVDVAKFTSSPGLSTEDLK 74
Query: 129 AEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIA 188
E L+HPH+V+L+ + +V+E+M L ++ + A +S +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTA---KLSDFGLAKDGPEGEETHVITR 245
A + D +I+RD K +LL S + KL FG+A GE V
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGG 192
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+GT + APE V DV+ GV+L LL+G
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ---GHKEWMAE 130
++ ++ LG G F V K + G E +K L ++ +E E
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKC---RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 58
Query: 131 IIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALG 190
+ L ++RHP+++ L + +L+ E + G L + F + +L +
Sbjct: 59 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEKESLTEDEATQFLKQ 116
Query: 191 AAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITRV 246
G+ +LH K + + D K NI LLD + KL DFG+A G E +
Sbjct: 117 ILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNI 171
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
GT + APE V L +D++S GV+ LL+G
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRG-SLHNQLFRSYSAALPWSTRMKIALGAAK 193
G+L+ PH+V + + E + +L V + G L L R A P + + +G+A
Sbjct: 89 GRLQEPHVVPIHDF-GEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSAL 147
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
A G +RD K NIL+ +D A L DFG+A E+ + +GT Y
Sbjct: 148 DAAHAAGA----THRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGTLYYX 202
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE H T +D+Y+ VL E LTG
Sbjct: 203 APERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 46/278 (16%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD-GTQGHKEWMAEI-IFLGQLRHPHL 142
LG G +G V EK++ Q +AVK + +Q K + ++ I + + P
Sbjct: 15 LGRGAYGVV------EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 143 VKLIGYCWEEEYRLLVYEYMPRG--SLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
V G + E + E M + Q+ +P KIA+ K L LH
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS 127
Query: 201 EDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVM--GTQGYAAPEYV 258
+ VI+RD K SN+L+++ K+ DFG++ G + + + G + Y APE +
Sbjct: 128 K-LSVIHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDDVAKDIDAGCKPYMAPERI 181
Query: 259 -----MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLKEPRKLER 313
G+ + SD++S G+ ++EL + D+ W P ++L++
Sbjct: 182 NPELNQKGY-SVKSDIWSLGITMIELAILRFPYDS-----------WGTPF----QQLKQ 225
Query: 314 LID---PRLEGQFPIKGAQKAAATAFKCLSHHPRHRPT 348
+++ P+L K + + +CL + + RPT
Sbjct: 226 VVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPT 260
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRL-LVYEYMPRGSLHNQLFRSYSAALPWSTRMKIA 188
EI + QL HP L+ L +E++Y + L+ E++ G L +++ + + + +
Sbjct: 98 EISIMNQLHHPKLINLHD-AFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYM 155
Query: 189 LGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY--TAKLSDFGLAKDGPEGEETHVITRV 246
A +GL +H + +++ D K NI+ ++ + K+ DFGLA E V T
Sbjct: 156 RQACEGLKHMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT-- 211
Query: 247 MGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
T +AAPE V + +D+++ GV+ LL+G
Sbjct: 212 -ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDG-TQGHKEWM-AEIIFLGQLRHPHL 142
+G G +G +K++ + + + K LD T+ K+ + +E+ L +L+HP++
Sbjct: 14 IGTGSYGRC------QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 143 VKLIGYCWEEEYRLL--VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHG 200
V+ + L V EY G L + + + + + LA
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 201 EDKP-----VIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
+ V++RD K +N+ LD KL DFGLA+ E+ +GT Y +P
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSP 185
Query: 256 EYVMTGHLTTMSDVYSFGVVLLEL 279
E + SD++S G +L EL
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V ++ L + VAVK ++ G + EII LRHP++V+
Sbjct: 28 IGSGNFG------VARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR 80
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ ++ EY G L+ ++ F A + + G+++ H
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL-------SGVSYCH 133
Query: 200 GEDKPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
+ +RD K N LLD K+ DFG +K + +GT Y APE
Sbjct: 134 SMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEV 188
Query: 258 VMTGHLT-TMSDVYSFGVVLLELLTG 282
++ ++DV+S GV L +L G
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 125 KEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR 184
+E E+ L ++RHP+++ L + +L+ E + G L + F + +L
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEKESLTEDEA 117
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEET 240
+ G+ +LH K + + D K NI LLD + KL DFG+A G E
Sbjct: 118 TQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE- 174
Query: 241 HVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ GT + APE V L +D++S GV+ LL+G
Sbjct: 175 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y AP +++ D ++ GV++ E+ G
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 125 KEWMAEIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTR 184
+E E+ L ++RHP+++ L + +L+ E + G L + F + +L
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEKESLTEDEA 131
Query: 185 MKIALGAAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEET 240
+ G+ +LH K + + D K NI LLD + KL DFG+A G E
Sbjct: 132 TQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE- 188
Query: 241 HVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ GT + APE V L +D++S GV+ LL+G
Sbjct: 189 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG--EETHVITRVMGTQG 251
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ E V+TR
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY----- 190
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
Y APE ++ D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 143 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 197
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 58
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYEYM-----------PRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E M RG+L +L RS
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARS 118
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 119 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 164
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 165 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYA 253
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ + ++T + T+ Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 254 APEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
APE ++ D++S G ++ E++ K
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 113/283 (39%), Gaps = 49/283 (17%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLD--GTQGHKEWMAEIIFLGQLRH--P 140
+G GG V++ ++K Q A+K ++L+ Q + EI +L +L+
Sbjct: 64 IGSGGSSKVFQVLNEKK-------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 141 HLVKLIGYCWEEEYRLLVYEYMPRGSLH-NQLFRSYSAALPWSTR--MKIALGAAKGLAF 197
+++L Y ++Y +Y M G++ N + + PW + K L A +
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-H 172
Query: 198 LHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
HG +++ D K +N L+ D KL DFG+A + V +G Y PE
Sbjct: 173 QHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 258 V-----------MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGREQSLAEWARPLLK 306
+ ++ SDV+S G +L + GK + ++
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIIN 272
Query: 307 EPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTM 349
+ KL +IDP E +FP + CL P+ R ++
Sbjct: 273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL--DGTQGHKEWMAEIIFLGQLRHPH 141
L+G+G FG VY G + VA++ +D+ D K + E++ Q RH +
Sbjct: 40 LIGKGRFGQVYHGRWHGE---------VAIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
+V +G C + L + + +G + R L + +IA KG+ +LH
Sbjct: 91 VVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA- 148
Query: 202 DKPVIYRDFKASNILLDSDYTAKLSDFGL 230
K ++++D K+ N+ D+ ++DFGL
Sbjct: 149 -KGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 79 FSRSNLLGEGGFGPV----YKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
F R LG G FG V +K + L+ Q V VK ++ T K + + F
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF- 100
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
P LVKL + +V EY+ G + + L R + P + A
Sbjct: 101 -----PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLT 153
Query: 195 LAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITR---VMGTQG 251
+LH D +IYRD K N+L+D +++DFG AK V R + GT
Sbjct: 154 FEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPE 203
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
APE +++ D ++ GV++ E+ G
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 139 HPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFL 198
HP++VKL ++ + LV E + G L ++ + + ++ + L +A
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS---- 120
Query: 199 HGEDKPVIYRDFKASNILL---DSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAP 255
H D V++RD K N+L + + K+ DFG A+ P + + T YAAP
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAP 178
Query: 256 EYVMTGHLTTMSDVYSFGVVLLELLTGK 283
E + D++S GV+L +L+G+
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 194 GLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEG--EETHVITRVMGTQG 251
G+ LH +I+RD K SNI++ SD T K+ DFGLA+ E V+TR
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY----- 190
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTGK 283
Y APE ++ D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 44/221 (19%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWE--EEYRLLVYEYMPRGS---------LHNQLFRSYSAA 178
EI L +L HP++VKL+ + E++ +V+E + +G L R Y
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 179 LPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGE 238
L KG+ +LH + +I+RD K SN+L+ D K++DFG++ + +G
Sbjct: 146 L------------IKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGS 190
Query: 239 ETHVITRVMGTQGYAAPE------YVMTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLG 292
+ +++ +GT + APE + +G DV++ GV L + G+ + R+
Sbjct: 191 DA-LLSNTVGTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 293 ------REQSLAEWARPLLKEPRK--LERLIDPRLEGQFPI 325
+ Q+L +P + E K + R++D E + +
Sbjct: 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVV 287
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 19/184 (10%)
Query: 112 AVKALDLDGTQGHKEWMAEI-IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQ 170
AVK +D + ++ EI I L +HP+++ L + +Y +V E M G L ++
Sbjct: 51 AVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDK 106
Query: 171 LFRSYSAALPWSTR--MKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY----TAK 224
+ R +S R + K + +LH + V++RD K SNIL + + +
Sbjct: 107 ILRQKF----FSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIR 160
Query: 225 LSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKR 284
+ DFG AK E ++ T + APE + D++S GV+L +LTG
Sbjct: 161 ICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 285 AMDN 288
N
Sbjct: 219 PFAN 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 13/214 (6%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFL 134
+ + +LLGEG +G V + E L A + K G EI L
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETL--CRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 135 GQLRHPHLVKLIGYCWEEEYR--LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
+LRH ++++L+ + EE + +V EY G + L P
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
GL +LH + ++++D K N+LL + T K+S G+A+ G+ +
Sbjct: 120 DGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 253 AAPEYVMTGHLTTMS----DVYSFGVVLLELLTG 282
PE + L T S D++S GV L + TG
Sbjct: 178 QPPE--IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 79 FSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDL----DGTQGHKEWMAEIIFL 134
+ R LGEG +G VYK +D + + VA+K + L +G G + E+ L
Sbjct: 36 YRRITKLGEGTYGEVYKA-IDT-----VTNETVAIKRIRLEHEEEGVPGTA--IREVSLL 87
Query: 135 GQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRM--KIALGAA 192
+L+H ++++L L++EY N L + S R+
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVIKSFLYQLI 142
Query: 193 KGLAFLHGEDKPVIYRDFKASNILL---DSDYTA--KLSDFGLAKDG--PEGEETHVITR 245
G+ F H + ++RD K N+LL D+ T K+ DFGLA+ P + TH I
Sbjct: 143 NGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII- 199
Query: 246 VMGTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELL 280
T Y PE ++ + H +T D++S + E+L
Sbjct: 200 ---TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 176
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 177 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 230 ILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 178 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 231 ILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 176
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 177 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 230 ILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 5 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 57
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 58 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 163
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 164 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 216
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 217 ILLYDMVCG 225
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 178 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 231 ILLYDMVCG 239
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 33 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 85
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 86 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 191
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 192 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 244
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 245 ILLYDMVCG 253
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 58
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 59 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 164
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 165 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 217
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 218 ILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 58
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 59 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 164
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 165 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 217
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 218 ILLYDMVCG 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 178 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 231 ILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 33 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 85
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 86 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 145
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 191
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 192 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 244
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 245 ILLYDMVCG 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 58
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 59 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 118
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 164
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 165 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 217
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 218 ILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 5 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 57
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 58 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 117
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 163
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 164 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 216
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 217 ILLYDMVCG 225
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 176
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 177 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 230 ILLYDMVCG 238
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 25 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 77
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 78 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 137
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 138 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 183
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 184 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 236
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 237 ILLYDMVCG 245
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 71
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 72 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 131
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 177
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 178 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 230
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 231 ILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 70
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 71 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 130
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 176
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 177 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 229
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 230 ILLYDMVCG 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 62 SKLHVFTLA---ELRLITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALD 117
+ LH LA E + S + LLG GGFG VY G V + L PVA+K ++
Sbjct: 38 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVE 90
Query: 118 LDGTQGHKEW------MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE--------- 160
D E E++ L ++ +++L+ + + +L+ E
Sbjct: 91 KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF 150
Query: 161 --YMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLD 218
RG+L +L RS+ + + R H + V++RD K NIL+D
Sbjct: 151 DFITERGALQEELARSFFWQVLEAVR--------------HCHNCGVLHRDIKDENILID 196
Query: 219 SDY-TAKLSDFG---LAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFG 273
+ KL DFG L KD V T GT+ Y+ PE++ S V+S G
Sbjct: 197 LNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLG 249
Query: 274 VVLLELLTG 282
++L +++ G
Sbjct: 250 ILLYDMVCG 258
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 59
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 120 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 165
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 166 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 59
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 120 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 165
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 166 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 58
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 118
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 119 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 164
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 165 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 54
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 115 FFWQVLEAVR--------------HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL 160
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 161 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 59
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 120 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 165
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 166 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 27/206 (13%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V ++ + VAVK ++ G + + EII LRHP++V+
Sbjct: 26 IGSGNFG------VARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 78
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ +V EY G L ++ F A + + G+++ H
Sbjct: 79 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCH 131
Query: 200 GEDKPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
V +RD K N LLD K+ DFG +K + +GT Y APE
Sbjct: 132 AMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEV 186
Query: 258 VMTGHLT-TMSDVYSFGVVLLELLTG 282
++ ++DV+S GV L +L G
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 81
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 141
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 142 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 187
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 188 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 57
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 58 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 117
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 118 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 163
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 164 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 54
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 115 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 160
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 161 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 75 ITSNFSRSNLLGEGGFGPVYKGF-VDEKLKPGLEAQPVAVKALDLDGTQGHKEW------ 127
+ S + LLG GGFG VY G V + L PVA+K ++ D E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNL-------PVAIKHVEKDRISDWGELPNGTRV 54
Query: 128 MAEIIFLGQLR--HPHLVKLIGYCWEEEYRLLVYE-----------YMPRGSLHNQLFRS 174
E++ L ++ +++L+ + + +L+ E RG+L +L RS
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 175 YSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDY-TAKLSDFG---L 230
+ + + R H + V++RD K NIL+D + KL DFG L
Sbjct: 115 FFWQVLEAVR--------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 160
Query: 231 AKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMS-DVYSFGVVLLELLTG 282
KD V T GT+ Y+ PE++ S V+S G++L +++ G
Sbjct: 161 LKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA--EIIF 133
S + + +G+G FG V+K K G Q VA+K + ++ + A EI
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKA---RHRKTG---QKVALKKVLMENEKEGFPITALREIKI 70
Query: 134 LGQLRHPHLVKLIGYCWEEE--YR------LLVYEYMPR---GSLHNQLFRSYSAALPWS 182
L L+H ++V LI C + Y LV+++ G L N L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGEE 239
+M + GL ++H +++RD KA+N+L+ D KL+DFGLA+ +
Sbjct: 131 MQMLL-----NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 240 THVITRVMGTQGYAAPEYVMTGH-LTTMSDVYSFGVVLLELLT 281
RV+ T Y PE ++ D++ G ++ E+ T
Sbjct: 184 NRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 27/206 (13%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V ++ + VAVK ++ G + EII LRHP++V+
Sbjct: 27 IGSGNFG------VARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVR 79
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ +V EY G L ++ F A + + G+++ H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYCH 132
Query: 200 GEDKPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
V +RD K N LLD K+ DFG +K + +GT Y APE
Sbjct: 133 AMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEV 187
Query: 258 VMTGHLT-TMSDVYSFGVVLLELLTG 282
++ ++DV+S GV L +L G
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA--EIIF 133
S + + +G+G FG V+K K G Q VA+K + ++ + A EI
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKA---RHRKTG---QKVALKKVLMENEKEGFPITALREIKI 70
Query: 134 LGQLRHPHLVKLIGYCWEEE--YR------LLVYEYMPR---GSLHNQLFRSYSAALPWS 182
L L+H ++V LI C + Y LV+++ G L N L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGEE 239
+M + GL ++H +++RD KA+N+L+ D KL+DFGLA+ +
Sbjct: 131 MQMLL-----NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 240 THVITRVMGTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLT 281
RV+ T Y PE ++ D++ G ++ E+ T
Sbjct: 184 NRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ---GHKEWMAEIIFLGQLRHPH 141
LG G F V K EK GLE +K ++ +E E+ L Q+ H +
Sbjct: 20 LGSGQFAIVKK--CREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L +L+ E + G L + F + +L G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 202 DKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
K + + D K NI LLD + KL DFGLA + +G E + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
V L +D++S GV+ LL+G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ---GHKEWMAEIIFLGQLRHPH 141
LG G F V K EK GLE +K ++ +E E+ L Q+ H +
Sbjct: 20 LGSGQFAIVKK--CREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L +L+ E + G L + F + +L G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 202 DKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
K + + D K NI LLD + KL DFGLA + +G E + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
V L +D++S GV+ LL+G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA--EIIF 133
S + + +G+G FG V+K K G Q VA+K + ++ + A EI
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKA---RHRKTG---QKVALKKVLMENEKEGFPITALREIKI 70
Query: 134 LGQLRHPHLVKLIGYCWEEE--YR------LLVYEYMPR---GSLHNQLFRSYSAALPWS 182
L L+H ++V LI C + Y LV+++ G L N L + + +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGEE 239
+M + GL ++H +++RD KA+N+L+ D KL+DFGLA+ +
Sbjct: 131 MQMLL-----NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 240 THVITRVMGTQGYAAPEYVMTGH-LTTMSDVYSFGVVLLELLT 281
RV+ T Y PE ++ D++ G ++ E+ T
Sbjct: 184 NRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHK--EWMAEIIF 133
+ +S + LG G FG V+ EK K + K L+ + K + EI
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 134 LGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRG-SLHNQLFRSYSAALPWSTRMKIALGAA 192
L ++ H +++K++ + + LV E G L + R P ++ + L +A
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 193 KGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGTQGY 252
G L K +I+RD K NI++ D+T KL DFG A G+ + GT Y
Sbjct: 143 VGYLRL----KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEY 195
Query: 253 AAPEYVMTG-HLTTMSDVYSFGVVLLELL 280
APE +M + +++S GV L L+
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ---GHKEWMAEIIFLGQLRHPH 141
LG G F V K EK GLE +K ++ +E E+ L Q+ H +
Sbjct: 20 LGSGQFAIVKK--CREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L +L+ E + G L + F + +L G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 202 DKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
K + + D K NI LLD + KL DFGLA + +G E + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
V L +D++S GV+ LL+G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 156 LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNI 215
L++ E M G L +++ A +I + FLH + + +RD K N+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENL 159
Query: 216 LLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSF 272
L S D KL+DFG AK+ + + + T Y APE + D++S
Sbjct: 160 LYTSKEKDAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 215
Query: 273 GVVLLELLTG 282
GV++ LL G
Sbjct: 216 GVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 156 LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGEDKPVIYRDFKASNI 215
L++ E M G L +++ A +I + FLH + + +RD K N+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENL 140
Query: 216 LLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSF 272
L S D KL+DFG AK+ + + + T Y APE + D++S
Sbjct: 141 LYTSKEKDAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 273 GVVLLELLTG 282
GV++ LL G
Sbjct: 197 GVIMYILLCG 206
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ---GHKEWMAEIIFLGQLRHPH 141
LG G F V K EK GLE +K ++ +E E+ L Q+ H +
Sbjct: 20 LGSGQFAIVKK--CREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L +L+ E + G L + F + +L G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 202 DKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
K + + D K NI LLD + KL DFGLA + +G E + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
V L +D++S GV+ LL+G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 76 TSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMA--EIIF 133
S + + +G+G FG V+K K G Q VA+K + ++ + A EI
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKA---RHRKTG---QKVALKKVLMENEKEGFPITALREIKI 69
Query: 134 LGQLRHPHLVKLIGYCWEEE--YR------LLVYEYMPR---GSLHNQLFRSYSAALPWS 182
L L+H ++V LI C + Y LV+++ G L N L + + +
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 183 TRMKIALGAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKD---GPEGEE 239
+M + GL ++H +++RD KA+N+L+ D KL+DFGLA+ +
Sbjct: 130 MQMLL-----NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 240 THVITRVMGTQGYAAPEYVM-TGHLTTMSDVYSFGVVLLELLT 281
RV+ T Y PE ++ D++ G ++ E+ T
Sbjct: 183 NRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLRHPHLVK 144
+G G FG V ++ + VAVK ++ G + + EII LRHP++V+
Sbjct: 27 IGAGNFG------VARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 145 LIGYCWEEEYRLLVYEYMPRGSLHNQL-----FRSYSAALPWSTRMKIALGAAKGLAFLH 199
+ +V EY G L ++ F A + + G+++ H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYAH 132
Query: 200 GEDKPVIYRDFKASNILLDSDYTA--KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
V +RD K N LLD K++DFG +K + +GT Y APE
Sbjct: 133 AMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP---KSAVGTPAYIAPEV 187
Query: 258 VMTGHLT-TMSDVYSFGVVLLELLTG 282
++ ++DV+S GV L +L G
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 LITSNFSRSNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIF 133
+F R + LG G +G V+K E + + AVK + +G K+ ++
Sbjct: 54 FFQQSFQRLSRLGHGSYGEVFKVRSKE------DGRLYAVKR-SMSPFRGPKDRARKLAE 106
Query: 134 LGQL----RHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
+G +HP V+L WEE L + + SL Q ++ A+LP +
Sbjct: 107 VGSHEKVGQHPCCVRLE-QAWEEGGILYLQTELCGPSL-QQHCEAWGASLPEAQVWGYLR 164
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVITRVMGT 249
LA LH + +++ D K +NI L KL DFGL + V G
Sbjct: 165 DTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GD 219
Query: 250 QGYAAPEYVMTGHLTTMSDVYSFGVVLLEL 279
Y APE ++ G T +DV+S G+ +LE+
Sbjct: 220 PRYMAPE-LLQGSYGTAADVFSLGLTILEV 248
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E+ L +++HP+++ L + +L+ E + G L + F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITR 245
G+ +LH + + D K NI LLD + K+ DFGLA G E
Sbjct: 122 QILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKN 176
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ GT + APE V L +D++S GV+ LL+G
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 85 LGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQ---GHKEWMAEIIFLGQLRHPH 141
LG G F V K EK GLE +K ++ +E E+ L Q+ H +
Sbjct: 20 LGSGQFAIVKK--CREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 142 LVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKGLAFLHGE 201
++ L +L+ E + G L + F + +L G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILDGVNYLHT- 133
Query: 202 DKPVIYRDFKASNI-LLDSDYTA---KLSDFGLAKDGPEGEETHVITRVMGTQGYAAPEY 257
K + + D K NI LLD + KL DFGLA + +G E + GT + APE
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEI 189
Query: 258 VMTGHLTTMSDVYSFGVVLLELLTG 282
V L +D++S GV+ LL+G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 69 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 128 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPY 182
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 82 SNLLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR-HP 140
S LLGEG + V +G V L+ G E AVK ++ E+ L Q + +
Sbjct: 18 SELLGEGAYAKV-QGAV--SLQNGKE---YAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 141 HLVKLIGYCWEEEYRL-LVYEYMPRGSL--HNQLFRSYSAALPWSTRMKIALGAAKGLAF 197
++++LI + +E++ R LV+E + GS+ H Q + ++ ++ A L F
Sbjct: 72 NILELIEF-FEDDTRFYLVFEKLQGGSILAHIQKQKHFNE----REASRVVRDVAAALDF 126
Query: 198 LHGEDKPVIYRDFKASNILLDSDYT---AKLSDFGLA-----KDGPEGEETHVITRVMGT 249
LH K + +RD K NIL +S K+ DF L + T +T G+
Sbjct: 127 LH--TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 250 QGYAAPEY--VMTGHLT---TMSDVYSFGVVLLELLTG 282
Y APE V T T D++S GVVL +L+G
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 115 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 174 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 228
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 112 AVKALDLDGTQGHKEWMAEI-IFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQ 170
AVK +D + ++ EI I L +HP+++ L + +Y +V E G L ++
Sbjct: 51 AVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDK 106
Query: 171 LFRSYSAALPWSTRMKIAL--GAAKGLAFLHGEDKPVIYRDFKASNILLDSDY----TAK 224
+ R +S R A+ K + +LH + V++RD K SNIL + + +
Sbjct: 107 ILRQKF----FSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIR 160
Query: 225 LSDFGLAKDGPEGEETHVITRVMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTGKR 284
+ DFG AK E ++ T + APE + D++S GV+L LTG
Sbjct: 161 ICDFGFAKQ--LRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 285 AMDN 288
N
Sbjct: 219 PFAN 222
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 121 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 180 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 234
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 59/300 (19%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR-HPHL 142
+LG G G V + + +PVAVK + +D + EI L + HP++
Sbjct: 40 ILGYGSSGTVV-------FQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNV 89
Query: 143 VKLIGYCWEEEYRLL----------VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
++ YC E R L + + + ++ ++ + P S +IA G A
Sbjct: 90 IRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 193 KGLAFLHGEDKPVIYRDFKASNILL--DSDYTAK-----------LSDFGLAKDGPEGEE 239
H +I+RD K NIL+ S +TA +SDFGL K G+
Sbjct: 148 ------HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 240 THV--ITRVMGTQGYAAPEYV---MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGRE 294
+ GT G+ APE + LT D++S G V +L+ + + RE
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 295 QSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
++ L +++ L D L + A + + H P RPT V+R
Sbjct: 262 SNIIRGIFSL----DEMKCLHDRSLIAE--------ATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 75 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 134 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 188
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 71 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 130 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 184
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 77 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 136 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 190
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 76 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 135 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 189
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 63/304 (20%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR-HPHL 142
+LG G G V + + +PVAVK + +D + EI L + HP++
Sbjct: 22 ILGYGSSGTVV-------FQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNV 71
Query: 143 VKLIGYCWEEEYRLL----------VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
++ YC E R L + + + ++ ++ + P S +IA G A
Sbjct: 72 IRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 193 KGLAFLHGEDKPVIYRDFKASNILL--DSDYTAK-----------LSDFGLAKDGPEGEE 239
H +I+RD K NIL+ S +TA +SDFGL K G+
Sbjct: 130 ------HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 240 THV--ITRVMGTQGYAAPEYVMTGH-------LTTMSDVYSFGVVLLELLTGKRAMDNTR 290
+ + GT G+ APE + + LT D++S G V +L+ + +
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
Query: 291 LGREQSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMS 350
RE ++ L +++ L D L + A + + H P RPT
Sbjct: 244 YSRESNIIRGIFSL----DEMKCLHDRSLIAE--------ATDLISQMIDHDPLKRPTAM 291
Query: 351 YVVR 354
V+R
Sbjct: 292 KVLR 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 70 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 129 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 183
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 85 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 144 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 198
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 71 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 130 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 184
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 59/300 (19%)
Query: 84 LLGEGGFGPVYKGFVDEKLKPGLEAQPVAVKALDLDGTQGHKEWMAEIIFLGQLR-HPHL 142
+LG G G V + + +PVAVK + +D + EI L + HP++
Sbjct: 40 ILGYGSSGTVV-------FQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNV 89
Query: 143 VKLIGYCWEEEYRLL----------VYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAA 192
++ YC E R L + + + ++ ++ + P S +IA G A
Sbjct: 90 IRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 193 KGLAFLHGEDKPVIYRDFKASNILL--DSDYTAK-----------LSDFGLAKDGPEGEE 239
H +I+RD K NIL+ S +TA +SDFGL K G+
Sbjct: 148 ------HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 240 THV--ITRVMGTQGYAAPEYV---MTGHLTTMSDVYSFGVVLLELLTGKRAMDNTRLGRE 294
+ GT G+ APE + LT D++S G V +L+ + + RE
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 295 QSLAEWARPLLKEPRKLERLIDPRLEGQFPIKGAQKAAATAFKCLSHHPRHRPTMSYVVR 354
++ L +++ L D L + A + + H P RPT V+R
Sbjct: 262 SNIIRGIFSL----DEMKCLHDRSLIAE--------ATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E+ L +++HP+++ L + +L+ E + G L + F + +L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 120
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITR 245
G+ +LH + + D K NI LLD + K+ DFGLA G E
Sbjct: 121 QILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKN 175
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ GT + APE V L +D++S GV+ LL+G
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 140 PHLVKLIGYCWEEEYR-----LLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIALGAAKG 194
PH+V+++ +E Y L+V E + G L +++ A +I +
Sbjct: 69 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 195 LAFLHGEDKPVIYRDFKASNILLDS---DYTAKLSDFGLAKDGPEGEETHVITRVMGTQG 251
+ +LH + + +RD K N+L S + KL+DFG AK E + +T T
Sbjct: 128 IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPY 182
Query: 252 YAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
Y APE + D++S GV++ LL G
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E+ L +++HP+++ L + +L+ E + G L + F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITR 245
G+ +LH + + D K NI LLD + K+ DFGLA G E
Sbjct: 122 QILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKN 176
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ GT + APE V L +D++S GV+ LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E+ L +++HP+++ L + +L+ E + G L + F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITR 245
G+ +LH + + D K NI LLD + K+ DFGLA G E
Sbjct: 122 QILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKN 176
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ GT + APE V L +D++S GV+ LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 130 EIIFLGQLRHPHLVKLIGYCWEEEYRLLVYEYMPRGSLHNQLFRSYSAALPWSTRMKIAL 189
E+ L +++HP+++ L + +L+ E + G L + F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 190 GAAKGLAFLHGEDKPVIYRDFKASNI-LLDSDY---TAKLSDFGLAKDGPEGEETHVITR 245
G+ +LH + + D K NI LLD + K+ DFGLA G E
Sbjct: 122 QILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKN 176
Query: 246 VMGTQGYAAPEYVMTGHLTTMSDVYSFGVVLLELLTG 282
+ GT + APE V L +D++S GV+ LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,572,227
Number of Sequences: 62578
Number of extensions: 530968
Number of successful extensions: 3790
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 1197
Number of HSP's gapped (non-prelim): 1113
length of query: 401
length of database: 14,973,337
effective HSP length: 101
effective length of query: 300
effective length of database: 8,652,959
effective search space: 2595887700
effective search space used: 2595887700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)