BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040053
(74 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147823105|emb|CAN66332.1| hypothetical protein VITISV_000600 [Vitis vinifera]
Length = 463
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/74 (70%), Positives = 57/74 (77%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRP 60
MI PQ LIF HAAQF TV D RF V+GWLE+GLV+ W GMIGELEVG QF P P L P
Sbjct: 5 MIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELEVGGQFVPLPSLPP 64
Query: 61 RYIGVNGLHPLANS 74
RYIGVNG+ PLA+S
Sbjct: 65 RYIGVNGMRPLADS 78
>gi|296087896|emb|CBI35179.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/74 (70%), Positives = 57/74 (77%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRP 60
MI PQ LIF HAAQF TV D RF V+GWLE+GLV+ W GMIGELEVG QF P P L P
Sbjct: 117 MIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELEVGGQFVPLPSLPP 176
Query: 61 RYIGVNGLHPLANS 74
RYIGVNG+ PLA+S
Sbjct: 177 RYIGVNGMRPLADS 190
>gi|225463946|ref|XP_002268010.1| PREDICTED: uncharacterized protein LOC100241002 [Vitis vinifera]
Length = 467
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 57/74 (77%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRP 60
MI PQ LIF HAAQF TV D RF V+GWLE+GLV+ W GMIGELEVG QF P P L P
Sbjct: 117 MIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELEVGGQFVPLPSLPP 176
Query: 61 RYIGVNGLHPLANS 74
RYIGVNG+ PLA+S
Sbjct: 177 RYIGVNGMRPLADS 190
>gi|224130614|ref|XP_002328333.1| predicted protein [Populus trichocarpa]
gi|222838048|gb|EEE76413.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/74 (66%), Positives = 56/74 (75%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRP 60
+I PQPLIF HAAQF TV+D RF V+ WLE+GLVR W G+IGELEVG QF PFP P
Sbjct: 141 VIDPQPLIFDHAAQFFTVSDPRFSELVDDWLEKGLVRQWQGIIGELEVGGQFLPFPSSTP 200
Query: 61 RYIGVNGLHPLANS 74
RYI VNG+ LA+S
Sbjct: 201 RYISVNGMRSLADS 214
>gi|414868817|tpg|DAA47374.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 266
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRY 62
G + L+F HAAQF T +D RF VN WL+RGLVR W G+IGELE G F P P L PRY
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELEAGGCFRPIPSLTPRY 177
Query: 63 IGVNGLHPLANS 74
IGVNG+ PLA++
Sbjct: 178 IGVNGMRPLADA 189
>gi|414868815|tpg|DAA47372.1| TPA: hypothetical protein ZEAMMB73_111446 [Zea mays]
Length = 210
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRY 62
G + L+F HAAQF T +D RF VN WL+RGLVR W G+IGELE G F P P L PRY
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELEAGGCFRPIPSLTPRY 177
Query: 63 IGVNGLHPLANS 74
IGVNG+ PLA++
Sbjct: 178 IGVNGMRPLADA 189
>gi|414868816|tpg|DAA47373.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 384
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRY 62
G + L+F HAAQF T +D RF VN WL+RGLVR W G+IGELE G F P P L PRY
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELEAGGCFRPIPSLTPRY 177
Query: 63 IGVNGLHPLANS 74
IGVNG+ PLA++
Sbjct: 178 IGVNGMRPLADA 189
>gi|226530158|ref|NP_001140386.1| uncharacterized protein LOC100272440 [Zea mays]
gi|223973745|gb|ACN31060.1| unknown [Zea mays]
Length = 505
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRY 62
G + L+F HAAQF T +D RF VN WL+RGLVR W G+IGELE G F P P L PRY
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELEAGGCFRPIPSLTPRY 177
Query: 63 IGVNGLHPLANS 74
IGVNG+ PLA++
Sbjct: 178 IGVNGMRPLADA 189
>gi|242086110|ref|XP_002443480.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
gi|241944173|gb|EES17318.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
Length = 507
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRY 62
G + L+F HAAQF T +D RF V+ WL+RGLVR W G++GELE G +F P L PRY
Sbjct: 152 GGEQLVFDHAAQFFTASDERFQSMVDEWLDRGLVREWSGLVGELEAGGRFRAIPSLTPRY 211
Query: 63 IGVNGLHPLANS 74
IGVNG+ PLA++
Sbjct: 212 IGVNGMRPLADA 223
>gi|449443231|ref|XP_004139383.1| PREDICTED: uncharacterized protein LOC101219713 [Cucumis sativus]
Length = 545
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPR 61
+GP+PL+F HAAQF TV D +F V+GWL LV+ W G +GELE+G +F P PR
Sbjct: 145 LGPEPLMFDHAAQFFTVTDNQFAQLVDGWLAADLVKEWKGTVGELELGGRFVPMSSC-PR 203
Query: 62 YIGVNGLHPLANS 74
YIG NG+ PLA+S
Sbjct: 204 YIGTNGMRPLADS 216
>gi|449483109|ref|XP_004156495.1| PREDICTED: uncharacterized protein LOC101226129 [Cucumis sativus]
Length = 536
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPR 61
+GP+PL+F HAAQF TV D +F V+GWL LV+ W G +GELE+G +F P PR
Sbjct: 145 LGPEPLMFDHAAQFFTVTDNQFAQLVDGWLAADLVKEWKGTVGELELGGRFVPMSSC-PR 203
Query: 62 YIGVNGLHPLANS 74
YIG NG+ PLA+S
Sbjct: 204 YIGTNGMRPLADS 216
>gi|357116570|ref|XP_003560053.1| PREDICTED: uncharacterized protein LOC100824134 [Brachypodium
distachyon]
Length = 477
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L+F HAAQF T +D RF V W+ERGLVR W G IGELE G F P PRYIGVN
Sbjct: 125 LVFDHAAQFFTASDERFQKLVEEWVERGLVREWRGSIGELEAGGHFRPIHSSTPRYIGVN 184
Query: 67 GLHPLANS 74
G+ PLA++
Sbjct: 185 GMRPLADA 192
>gi|326493132|dbj|BAJ85027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 46/68 (67%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L+F HAAQF T +D RF V+ W+E+GL R W G IGELE G FT P PRYIGV
Sbjct: 118 LVFDHAAQFFTASDRRFQKLVDEWVEKGLAREWRGAIGELEAGGHFTAIPSSTPRYIGVR 177
Query: 67 GLHPLANS 74
G+ PLA++
Sbjct: 178 GMRPLADA 185
>gi|222617407|gb|EEE53539.1| hypothetical protein OsJ_36748 [Oryza sativa Japonica Group]
Length = 481
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLR-PRYIGV 65
L+F HAAQF T +D RF V+ W+++GLVR WGG+IGEL+ G F P P PRYIGV
Sbjct: 129 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELDAGGHFRPMPSSSPPRYIGV 188
Query: 66 NGLHPLANS 74
+G+ PLA++
Sbjct: 189 DGMRPLADA 197
>gi|115489414|ref|NP_001067194.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|77556443|gb|ABA99239.1| expressed protein [Oryza sativa Japonica Group]
gi|113649701|dbj|BAF30213.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|215701342|dbj|BAG92766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 497
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLR-PRYIGV 65
L+F HAAQF T +D RF V+ W+++GLVR WGG+IGEL+ G F P P PRYIGV
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELDAGGHFRPMPSSSPPRYIGV 204
Query: 66 NGLHPLANS 74
+G+ PLA++
Sbjct: 205 DGMRPLADA 213
>gi|125537277|gb|EAY83765.1| hypothetical protein OsI_38983 [Oryza sativa Indica Group]
Length = 497
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLR-PRYIGV 65
L+F HAAQF T +D RF V+ W+++GLVR WGG+IGEL+ G F P P PRYIGV
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELDAGGHFRPMPSSSPPRYIGV 204
Query: 66 NGLHPLANS 74
+G+ PLA++
Sbjct: 205 DGMRPLADA 213
>gi|108862915|gb|ABG22072.1| expressed protein [Oryza sativa Japonica Group]
Length = 456
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLR-PRYIGV 65
L+F HAAQF T +D RF V+ W+++GLVR WGG+IGEL+ G F P P PRYIGV
Sbjct: 104 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELDAGGHFRPMPSSSPPRYIGV 163
Query: 66 NGLHPLANS 74
+G+ PLA++
Sbjct: 164 DGMRPLADA 172
>gi|297828968|ref|XP_002882366.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297328206|gb|EFH58625.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEV-GDQFTPFPFLR 59
+I PQ LIF HAAQF T +D RF V+GWLE+GLVR W G +GELEV G
Sbjct: 136 IIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEVGGSFSQFPSSSP 195
Query: 60 PRYIGVNGLHPLANS 74
PRYI VNG+ LA+S
Sbjct: 196 PRYIAVNGMLSLADS 210
>gi|18396966|ref|NP_566235.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|6175169|gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana]
gi|15215628|gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana]
gi|28416461|gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis thaliana]
gi|332640593|gb|AEE74114.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 486
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEV-GDQFTPFPFLR 59
+I PQ LIF HAAQF T +D RF V+GWLE+GLVR W G +GELE+ G
Sbjct: 136 IIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEIGGSFSQFPSSSP 195
Query: 60 PRYIGVNGLHPLANS 74
PRYI NG+ LA+S
Sbjct: 196 PRYIAANGMRSLADS 210
>gi|255580905|ref|XP_002531271.1| conserved hypothetical protein [Ricinus communis]
gi|223529104|gb|EEF31084.1| conserved hypothetical protein [Ricinus communis]
Length = 467
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVG 49
+I PQPL+F HAAQF TV+D +F V+GWLE+GL+R W G IGELE G
Sbjct: 134 VIDPQPLVFDHAAQFFTVSDPQFAQLVDGWLEKGLIRQWQGTIGELEKG 182
>gi|168008463|ref|XP_001756926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691797|gb|EDQ78157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 44/67 (65%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L F HAAQ+ TV+D +F V+ W++ G V+ W G++G+L+ G +++ PRY+G
Sbjct: 91 LTFDHAAQYFTVSDPKFRKLVDRWIDEGAVKEWKGVVGKLQAGGKYSDLADDVPRYVGTY 150
Query: 67 GLHPLAN 73
G+ PLA+
Sbjct: 151 GMRPLAD 157
>gi|302804250|ref|XP_002983877.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
gi|300148229|gb|EFJ14889.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
Length = 434
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L+F HAAQ+ TV D F V+ WL G V+ W G++G L G +F+P P +Y+ +
Sbjct: 86 LVFDHAAQYFTVKDPMFQKLVDQWLSEGAVKEWDGVVGMLREG-EFSPLPH-SVKYVATH 143
Query: 67 GLHPLAN 73
G+ LA+
Sbjct: 144 GMRLLAD 150
>gi|302754734|ref|XP_002960791.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
gi|300171730|gb|EFJ38330.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
Length = 434
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L+F HAAQ+ TV D F V+ WL G V+ W G++G L G +F+P P +Y+ +
Sbjct: 86 LVFDHAAQYFTVKDPMFQKLVDQWLSEGAVKEWDGVVGMLREG-EFSPLPH-SVKYVATH 143
Query: 67 GLHPLAN 73
G+ LA+
Sbjct: 144 GMRLLAD 150
>gi|449136587|ref|ZP_21771963.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
gi|448884760|gb|EMB15236.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
Length = 837
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQ+ TV D RF V W+++GLV PW I EL+ G + PRY+GV G+
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKVVEEKCGTPRYVGVPGM 580
Query: 69 HPL 71
+ +
Sbjct: 581 NAI 583
>gi|417302748|ref|ZP_12089836.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
gi|327540991|gb|EGF27547.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
Length = 837
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQ+ TV D RF V W+++GLV PW I EL+ G + PRY+GV G+
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKVVEEKCGTPRYVGVPGM 580
Query: 69 HPL 71
+
Sbjct: 581 SAI 583
>gi|32475803|ref|NP_868797.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH 1]
gi|32446346|emb|CAD76174.1| probable deoxyribodipyrimidine photolyase [Rhodopirellula baltica
SH 1]
Length = 837
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQ+ TV D RF V W+++GLV PW I EL+ G + PRY+GV G+
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKVVEEKCGTPRYVGVPGM 580
Query: 69 HPL 71
+
Sbjct: 581 SAI 583
>gi|421612943|ref|ZP_16054037.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
gi|408496253|gb|EKK00818.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
Length = 837
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQ+ TV D RF V W+++GLV PW I EL+ G + PRY+GV G+
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKVVEEKCGTPRYVGVPGM 580
Query: 69 HPL 71
+
Sbjct: 581 SAI 583
>gi|440716033|ref|ZP_20896552.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
gi|436438979|gb|ELP32478.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
Length = 837
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQ+ TV D RF V W+++GLV PW I EL+ G + PRY+GV G+
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKVVEEKCGTPRYVGVPGM 580
Query: 69 HPL 71
+
Sbjct: 581 SAI 583
>gi|406832394|ref|ZP_11091988.1| DNA photolyase FAD-binding protein [Schlesneria paludicola DSM
18645]
Length = 368
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L F H AQ+ TV D F P V W+ERG+ W G I E++ G P L RY+GV
Sbjct: 88 LEFDHGAQYFTVTDPLFEPLVQSWIERGIAAEWHGRIVEID-GSIVKVKPPLPKRYVGVP 146
Query: 67 GLHPLA 72
G+ +A
Sbjct: 147 GMTAMA 152
>gi|87306827|ref|ZP_01088973.1| amine oxidase, flavin-containing [Blastopirellula marina DSM 3645]
gi|87290200|gb|EAQ82088.1| amine oxidase, flavin-containing [Blastopirellula marina DSM 3645]
Length = 326
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 5 QPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRP-RYI 63
+ L F H AQ+ T D RF V W+ G++ PW G IG L+ G+ TP P RY+
Sbjct: 44 EDLHFDHGAQYFTARDPRFQRQVEAWVAAGVIAPWKGAIGVLQSGEVSTPET--NPVRYV 101
Query: 64 GVNGLHPLA 72
GV ++ A
Sbjct: 102 GVPAMNAPA 110
>gi|296120560|ref|YP_003628338.1| DNA photolyase FAD-binding protein [Planctomyces limnophilus DSM
3776]
gi|296012900|gb|ADG66139.1| DNA photolyase FAD-binding protein [Planctomyces limnophilus DSM
3776]
Length = 843
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 4 PQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYI 63
P+ F H Q+IT +F S+ W +GL+ PW G++ + PRY+
Sbjct: 533 PEGGQFDHGCQYITAKSPQFERSLRSWESQGLITPWQGLLAAQRTDGSWKELAANGPRYV 592
Query: 64 GVNGLHPLA 72
G+ G+ +A
Sbjct: 593 GLPGMTSMA 601
>gi|386716076|ref|YP_006182400.1| hypothetical protein HBHAL_4791 [Halobacillus halophilus DSM 2266]
gi|384075633|emb|CCG47129.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 321
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H AQF TV F V GWL++G ++ W GD++ PRY V+G++
Sbjct: 55 HGAQFFTVRTKEFEEEVEGWLDQGRIKRW--------FGDEY-------PRYTAVDGMNS 99
Query: 71 LA 72
LA
Sbjct: 100 LA 101
>gi|172056198|ref|YP_001812658.1| putative deoxyribodipyrimidine photolyase [Exiguobacterium
sibiricum 255-15]
gi|171988719|gb|ACB59641.1| putative deoxyribodipyrimidine photolyase [Exiguobacterium
sibiricum 255-15]
Length = 330
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 15/64 (23%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H A F TV V+ WLE+GLVR W GD F PRY+ VNG++
Sbjct: 55 HGAVFFTVRTDELAQEVDEWLEQGLVRKW--------FGDDF-------PRYVAVNGMNQ 99
Query: 71 LANS 74
L S
Sbjct: 100 LVQS 103
>gi|303271275|ref|XP_003054999.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462973|gb|EEH60251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPW-GGMIGELE-VGDQFTPFPFLRPRYIGVN 66
F H+ Q+ TV+D RF W GL+ PW +G L+ +F F R+IGV+
Sbjct: 59 FDHSTQYFTVDDPRFEALAKEWAAEGLIAPWPNSAVGVLDATSGRFRSFDDATTRWIGVD 118
Query: 67 GLHPL 71
G PL
Sbjct: 119 GWTPL 123
>gi|219124354|ref|XP_002182470.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405816|gb|EEC45757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 523
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L + H QF + RF V GW+E G+ + W G G+ F P P ++G+
Sbjct: 58 LEWDHGCQFFRADTERFRQKVEGWIEGGMCQEWFGKFGQDSSSADFFGLPGKPPFFVGMK 117
Query: 67 GL 68
GL
Sbjct: 118 GL 119
>gi|255080734|ref|XP_002503940.1| predicted protein [Micromonas sp. RCC299]
gi|226519207|gb|ACO65198.1| predicted protein [Micromonas sp. RCC299]
Length = 468
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 9 FGHAAQFITVND-YRFHPSVNGWLERGLVRPW-GGMIGELEVGDQFTPFPFLRPRYIGVN 66
F H+ Q++T + RF W + GL+ W +G L+ G FTPF RYIG
Sbjct: 57 FDHSTQYMTCTEGSRFESMAKEWAKEGLLAEWPADRVGTLKDG-SFTPFDDGVVRYIGAG 115
Query: 67 GLHPLAN 73
GL PLA+
Sbjct: 116 GLRPLAD 122
>gi|407476042|ref|YP_006789919.1| Deoxyribodipyrimidine photolyase [Exiguobacterium antarcticum B7]
gi|407060121|gb|AFS69311.1| Deoxyribodipyrimidine photolyase [Exiguobacterium antarcticum B7]
Length = 329
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H A F TV V+ WLE+G +R W GD F PRYI VNG++
Sbjct: 55 HGAVFFTVRTDELAQEVDEWLEKGWIRKW--------FGDDF-------PRYIAVNGMNQ 99
Query: 71 LANS 74
L S
Sbjct: 100 LVQS 103
>gi|159470051|ref|XP_001693173.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277431|gb|EDP03199.1| predicted protein [Chlamydomonas reinhardtii]
Length = 417
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 18 VNDYRFHPSVNGWLERGLVRPWGGMIGELEVGD-QFTPFPFLRPRYIGVNGLHPLANS 74
V D F V+ WL GLVR W G +G L G F P PRY+ V G+ LA +
Sbjct: 85 VADPSFQSVVDDWLATGLVRVWEGPVGTLRAGAGAFARLPPSPPRYVAVGGMRRLAEA 142
>gi|294055434|ref|YP_003549092.1| fumarate reductase/succinate dehydrogenase flavoprotein
domain-containing protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614767|gb|ADE54922.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
protein [Coraliomargarita akajimensis DSM 45221]
Length = 326
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H AQF TV + RF V+ WL G++R W + P PRY+GV+G+H
Sbjct: 56 HGAQFFTVREQRFRGYVDEWLNAGVIREWFRH-------SKVDHHPDGHPRYVGVDGMHA 108
Query: 71 L 71
+
Sbjct: 109 V 109
>gi|38489211|gb|AAR21290.1| hypothetical protein [Bacillus pseudofirmus OF4]
Length = 214
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H AQF T V+ W+E G V W ++++G Q PRY+G +G++
Sbjct: 55 HGAQFFTARSDVMKSLVDSWMEEGTVNEWTKGFHQMDLGGQVHLEADGYPRYVGSSGMNT 114
Query: 71 LANS 74
L S
Sbjct: 115 LTKS 118
>gi|405967022|gb|EKC32236.1| Small conductance calcium-activated potassium channel protein
[Crassostrea gigas]
Length = 861
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRP 60
MI Q F H+ Q+ TV+D RF V+ + V+ W G IG L+ G +F +
Sbjct: 45 MINGQLHTFDHSCQYFTVSDRRFANIVSFLHNKNAVKIWTGKIGHLKSG-KFHEDSNITQ 103
Query: 61 RYIGVNGLHPLAN 73
+IG +G+ +A+
Sbjct: 104 AFIGTDGMQTVAD 116
>gi|428178524|gb|EKX47399.1| hypothetical protein GUITHDRAFT_106844 [Guillardia theta CCMP2712]
Length = 426
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H+ QF T D +F V W + G+V+ W G +G L+ G FT ++GV G+
Sbjct: 52 HSTQFFTATDPKFTALVEEWEKNGVVQEWKGPVGVLDKG-SFTGLAASSKLWVGVGGIDA 110
Query: 71 LA 72
+A
Sbjct: 111 IA 112
>gi|288555896|ref|YP_003427831.1| FAD dependent oxidoreductase [Bacillus pseudofirmus OF4]
gi|288547056|gb|ADC50939.1| FAD dependent oxidoreductase [Bacillus pseudofirmus OF4]
Length = 336
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H AQF T V+ W+E G V W ++++G Q PRY+G +G++
Sbjct: 55 HGAQFFTARSDVMKSLVDSWMEEGTVNEWTKGFHQMDLGGQVHLEADGYPRYVGSSGMNT 114
Query: 71 LANS 74
L S
Sbjct: 115 LTKS 118
>gi|260802390|ref|XP_002596075.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
gi|229281329|gb|EEN52087.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
Length = 276
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPR 61
+G + +F H+AQ+ TV+D RF V+ +G V+ W G IG L+ G +F L+
Sbjct: 55 VGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLK-GGRFVKNANLQA- 112
Query: 62 YIGVNGL 68
++G G+
Sbjct: 113 FVGTGGM 119
>gi|108711418|gb|ABF99213.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|215707008|dbj|BAG93468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 208
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIG--ELEVGDQFTPFPF--LRPRY 62
L F H A + TV++ V+GW RGLV W M + E G +FT F +Y
Sbjct: 7 LRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAG-KFTDFEKEGTIKKY 65
Query: 63 IGVNGLHPLANS 74
+GV G++ + S
Sbjct: 66 VGVPGMNSICKS 77
>gi|444915214|ref|ZP_21235350.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
gi|444713796|gb|ELW54688.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
Length = 338
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQ+ T D F V W+E+G+ W G L+ G T RY+GV G+
Sbjct: 63 FDHGAQYFTARDEGFQRQVETWVEQGIAAEWRARFGTLDNG-ALTLKDEGPVRYVGVPGM 121
Query: 69 HPLANS 74
LA +
Sbjct: 122 SALAQA 127
>gi|168049602|ref|XP_001777251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671353|gb|EDQ57906.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L+F H AQ+ TV V+ W G+V W G G L V F RY+GV
Sbjct: 44 LMFDHGAQYFTVKTAEVQQLVDKWQASGIVADWEGRFGTLNVAT--GEFVEDTKRYVGVP 101
Query: 67 GLHPLANS 74
G++ + +
Sbjct: 102 GMNAICKA 109
>gi|383790127|ref|YP_005474701.1| putative NAD/FAD-dependent oxidoreductase [Spirochaeta africana DSM
8902]
gi|383106661|gb|AFG36994.1| putative NAD/FAD-dependent oxidoreductase [Spirochaeta africana DSM
8902]
Length = 441
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 15/65 (23%)
Query: 8 IFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNG 67
+F H AQF+TV D F ++ GW + G+V PW GD+ T RY G G
Sbjct: 84 VFDHGAQFMTVRDPGFARAMAGWTKSGVVAPW--------FGDKNT-------RYRGQTG 128
Query: 68 LHPLA 72
+ LA
Sbjct: 129 MTALA 133
>gi|260802416|ref|XP_002596088.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
gi|229281342|gb|EEN52100.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
Length = 401
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVG 49
+G + +F H+AQ+ TV+D RF V+ +G V+ W G IG L+ G
Sbjct: 55 VGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLKGG 102
>gi|325107068|ref|YP_004268136.1| FAD dependent oxidoreductase [Planctomyces brasiliensis DSM 5305]
gi|324967336|gb|ADY58114.1| FAD dependent oxidoreductase [Planctomyces brasiliensis DSM 5305]
Length = 341
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLR-PRYIGVNG 67
F H AQ+ T F V WLER +V W G L G P P PRY+G G
Sbjct: 58 FDHGAQYFTARTPEFQKQVQDWLEREVVAEWKGPFVSLSKG-TVGPDPGGNDPRYVGTPG 116
Query: 68 LHPL 71
++ +
Sbjct: 117 MNQI 120
>gi|329848116|ref|ZP_08263144.1| FAD dependent oxidoreductase family protein [Asticcacaulis
biprosthecum C19]
gi|328843179|gb|EGF92748.1| FAD dependent oxidoreductase family protein [Asticcacaulis
biprosthecum C19]
Length = 318
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPW 39
L F H AQ+ TV D RF V W +GLV PW
Sbjct: 53 LFFDHGAQYFTVRDRRFAAQVATWEAQGLVAPW 85
>gi|260802418|ref|XP_002596089.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
gi|229281343|gb|EEN52101.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
Length = 401
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVG 49
+G + +F H+AQ+ TV+D RF V+ +G V+ W G IG L+ G
Sbjct: 55 VGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLKGG 102
>gi|297624962|ref|YP_003706396.1| amine oxidase [Truepera radiovictrix DSM 17093]
gi|297166142|gb|ADI15853.1| amine oxidase [Truepera radiovictrix DSM 17093]
Length = 333
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPR 61
+G H AQ+ T D RF V WL G +R W L+ G P PR
Sbjct: 51 MGASETPVDHGAQYFTARDARFREQVEAWLAEGDLRVWSAGFHTLK-GRSLIPPEAGHPR 109
Query: 62 YIGVNGLHPLAN 73
Y +GL L
Sbjct: 110 YAFASGLSTLGK 121
>gi|283779092|ref|YP_003369847.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
gi|283437545|gb|ADB15987.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
Length = 824
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
L F H AQ+ T D R W E+G++ PW G I E G+ T RY+G
Sbjct: 527 LAFDHGAQYFTARDERVQRLAESWAEQGIIAPWTGRIVARE-GNVQTDVSKSIARYVG-- 583
Query: 67 GLHPLANS 74
P NS
Sbjct: 584 --QPTMNS 589
>gi|297583071|ref|YP_003698851.1| FAD dependent oxidoreductase [Bacillus selenitireducens MLS10]
gi|297141528|gb|ADH98285.1| FAD dependent oxidoreductase [Bacillus selenitireducens MLS10]
Length = 323
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 15/61 (24%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H A F TV F V+ WL+ G VR W G++ PRY G G++P
Sbjct: 53 HGAVFFTVRSEAFQTQVDTWLKDGQVRRW--------FGEE-------HPRYTGTEGMNP 97
Query: 71 L 71
L
Sbjct: 98 L 98
>gi|307110486|gb|EFN58722.1| hypothetical protein CHLNCDRAFT_16675, partial [Chlorella
variabilis]
Length = 406
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 4 PQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYI 63
P L+F HA Q+ T F V+ W G+V+ W G +G L G F P + RY+
Sbjct: 66 PPGLLFDHACQYFTATHPSFQQIVDEWQAAGVVQRWEGPVGRLR-GGSFVP-DGGQERYM 123
Query: 64 GVNGLHPLAN 73
G+ LA
Sbjct: 124 ARGGMRQLAE 133
>gi|114707631|ref|ZP_01440526.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
gi|114536875|gb|EAU40004.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
Length = 282
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPW 39
L F H AQF T D RF V GW+E G V W
Sbjct: 13 LQFDHGAQFFTARDPRFAKRVEGWVEAGHVARW 45
>gi|90416921|ref|ZP_01224850.1| hypothetical protein GB2207_06658 [gamma proteobacterium HTCC2207]
gi|90331268|gb|EAS46512.1| hypothetical protein GB2207_06658 [gamma proteobacterium HTCC2207]
Length = 336
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQF+T + RF SV W+E G+ W + P PRY GV +
Sbjct: 61 FDHGAQFMTARNSRFQASVAEWIEAGVAEEW---------YSSYPGHPNGHPRYRGVPTM 111
Query: 69 HPLA 72
+A
Sbjct: 112 TAVA 115
>gi|393762550|ref|ZP_10351177.1| FAD dependent oxidoreductase [Alishewanella agri BL06]
gi|392606785|gb|EIW89669.1| FAD dependent oxidoreductase [Alishewanella agri BL06]
Length = 310
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLH 69
AQ+ T + RF V W ++G+V PW + + + G + P P + R+IGV +H
Sbjct: 40 GAQYFTAREPRFIKQVQHWQQQGVVAPWLAPVWQYQQG-KLQPSPDSQYRFIGVPAMH 96
>gi|383457618|ref|YP_005371607.1| FAD dependent oxidoreductase [Corallococcus coralloides DSM 2259]
gi|380730498|gb|AFE06500.1| FAD dependent oxidoreductase [Corallococcus coralloides DSM 2259]
Length = 340
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGL 68
F H AQ+ T + F V+ W+ G+ W G IG L G TP RY+GV G+
Sbjct: 68 FDHGAQYFTAREPLFRALVDAWVADGVAAEWRGRIGTLTRG-AVTPAK-ASVRYVGVPGM 125
Query: 69 HPLANS 74
+A +
Sbjct: 126 SAVAKA 131
>gi|354566242|ref|ZP_08985415.1| amine oxidase [Fischerella sp. JSC-11]
gi|353546750|gb|EHC16198.1| amine oxidase [Fischerella sp. JSC-11]
Length = 327
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 8 IFGHAAQFITVNDYRFHPSVNGWLERGLVRPW 39
IF + AQ+ T D +F VN W++ G+V+ W
Sbjct: 60 IFDYGAQYFTAQDPKFQALVNSWIQEGIVKEW 91
>gi|393722350|ref|ZP_10342277.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26605]
Length = 311
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPW 39
F H AQF T D F +V GW R +V PW
Sbjct: 53 FDHGAQFFTARDPHFAAAVTGWAARKIVTPW 83
>gi|254244451|ref|ZP_04937773.1| hypothetical protein PA2G_05309 [Pseudomonas aeruginosa 2192]
gi|126197829|gb|EAZ61892.1| hypothetical protein PA2G_05309 [Pseudomonas aeruginosa 2192]
Length = 327
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
AQ+ T D RF ++ W E G V W + + G Q +P P +PR++G+
Sbjct: 54 GAQYFTARDRRFLDALQHWREEGWVDEWKPALYQYRDG-QLSPSPDEQPRWVGI 106
>gi|218893754|ref|YP_002442623.1| putative oxidoreductase [Pseudomonas aeruginosa LESB58]
gi|218773982|emb|CAW29797.1| putative oxidoreductase [Pseudomonas aeruginosa LESB58]
Length = 327
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
AQ+ T D RF ++ W E G V W + + G Q +P P +PR++G+
Sbjct: 54 GAQYFTARDRRFLDALQHWREEGWVDEWKPALYQYRDG-QLSPSPDEQPRWVGI 106
>gi|107099676|ref|ZP_01363594.1| hypothetical protein PaerPA_01000694 [Pseudomonas aeruginosa PACS2]
gi|254238602|ref|ZP_04931925.1| hypothetical protein PACG_04757 [Pseudomonas aeruginosa C3719]
gi|386060814|ref|YP_005977336.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
gi|392986326|ref|YP_006484913.1| oxidoreductase [Pseudomonas aeruginosa DK2]
gi|416855515|ref|ZP_11911546.1| putative oxidoreductase [Pseudomonas aeruginosa 138244]
gi|419754595|ref|ZP_14280955.1| putative oxidoreductase [Pseudomonas aeruginosa PADK2_CF510]
gi|421182719|ref|ZP_15640191.1| hypothetical protein PAE2_4670 [Pseudomonas aeruginosa E2]
gi|424944566|ref|ZP_18360329.1| putative oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|451985077|ref|ZP_21933308.1| COG3380: Amine oxidase, flavin-containing [Pseudomonas aeruginosa
18A]
gi|126170533|gb|EAZ56044.1| hypothetical protein PACG_04757 [Pseudomonas aeruginosa C3719]
gi|334842872|gb|EGM21471.1| putative oxidoreductase [Pseudomonas aeruginosa 138244]
gi|346061012|dbj|GAA20895.1| putative oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|347307120|gb|AEO77234.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
gi|384399008|gb|EIE45411.1| putative oxidoreductase [Pseudomonas aeruginosa PADK2_CF510]
gi|392321831|gb|AFM67211.1| putative oxidoreductase [Pseudomonas aeruginosa DK2]
gi|404541465|gb|EKA50822.1| hypothetical protein PAE2_4670 [Pseudomonas aeruginosa E2]
gi|451757251|emb|CCQ85831.1| COG3380: Amine oxidase, flavin-containing [Pseudomonas aeruginosa
18A]
gi|453042707|gb|EME90446.1| oxidoreductase [Pseudomonas aeruginosa PA21_ST175]
Length = 327
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
AQ+ T D RF ++ W E G V W + + G Q +P P +PR++G+
Sbjct: 54 GAQYFTARDRRFLDALQHWREEGWVDEWKPALYQYRDG-QLSPSPDEQPRWVGI 106
>gi|222625916|gb|EEE60048.1| hypothetical protein OsJ_12845 [Oryza sativa Japonica Group]
Length = 377
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIG--ELEVGDQFTPFPF--LRPRY 62
L F H A + TV++ V+GW RGLV W M + E G +FT F +Y
Sbjct: 59 LRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAG-KFTDFEKEGTIKKY 117
Query: 63 IGVNGLHPLANS 74
+GV G++ + S
Sbjct: 118 VGVPGMNSICKS 129
>gi|115455739|ref|NP_001051470.1| Os03g0784000 [Oryza sativa Japonica Group]
gi|108711417|gb|ABF99212.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|113549941|dbj|BAF13384.1| Os03g0784000 [Oryza sativa Japonica Group]
Length = 382
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIG--ELEVGDQFTPFPF--LRPRY 62
L F H A + TV++ V+GW RGLV W M + E G +FT F +Y
Sbjct: 64 LRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAG-KFTDFEKEGTIKKY 122
Query: 63 IGVNGLHPLANS 74
+GV G++ + S
Sbjct: 123 VGVPGMNSICKS 134
>gi|15599852|ref|NP_253346.1| hypothetical protein PA4657 [Pseudomonas aeruginosa PAO1]
gi|418588039|ref|ZP_13152056.1| hypothetical protein O1O_25105 [Pseudomonas aeruginosa MPAO1/P1]
gi|418590118|ref|ZP_13154033.1| hypothetical protein O1Q_05963 [Pseudomonas aeruginosa MPAO1/P2]
gi|420141845|ref|ZP_14649484.1| hypothetical protein PACIG1_4990 [Pseudomonas aeruginosa CIG1]
gi|421156083|ref|ZP_15615537.1| hypothetical protein PABE171_4911 [Pseudomonas aeruginosa ATCC
14886]
gi|421163216|ref|ZP_15621943.1| hypothetical protein PABE173_5471 [Pseudomonas aeruginosa ATCC
25324]
gi|421519215|ref|ZP_15965887.1| hypothetical protein A161_23188 [Pseudomonas aeruginosa PAO579]
gi|9950911|gb|AAG08044.1|AE004879_10 hypothetical protein PA4657 [Pseudomonas aeruginosa PAO1]
gi|375041179|gb|EHS33892.1| hypothetical protein O1O_25105 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051069|gb|EHS43542.1| hypothetical protein O1Q_05963 [Pseudomonas aeruginosa MPAO1/P2]
gi|403245402|gb|EJY59219.1| hypothetical protein PACIG1_4990 [Pseudomonas aeruginosa CIG1]
gi|404346200|gb|EJZ72551.1| hypothetical protein A161_23188 [Pseudomonas aeruginosa PAO579]
gi|404519462|gb|EKA30214.1| hypothetical protein PABE171_4911 [Pseudomonas aeruginosa ATCC
14886]
gi|404529464|gb|EKA39500.1| hypothetical protein PABE173_5471 [Pseudomonas aeruginosa ATCC
25324]
Length = 327
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
AQ+ T D RF ++ W E G V W + + G Q +P P +PR++G+
Sbjct: 54 GAQYFTARDRRFLDALQHWREEGWVDEWKPALYQYRDG-QLSPSPDEQPRWVGI 106
>gi|116052802|ref|YP_793119.1| hypothetical protein PA14_61600 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391478|ref|ZP_06880953.1| hypothetical protein PaerPAb_25129 [Pseudomonas aeruginosa PAb1]
gi|313107319|ref|ZP_07793514.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|355652215|ref|ZP_09056650.1| hypothetical protein HMPREF1030_05736 [Pseudomonas sp. 2_1_26]
gi|386063887|ref|YP_005979191.1| hypothetical protein NCGM2_0930 [Pseudomonas aeruginosa NCGM2.S1]
gi|416874238|ref|ZP_11918007.1| hypothetical protein PA15_08012 [Pseudomonas aeruginosa 152504]
gi|421170440|ref|ZP_15628393.1| hypothetical protein PABE177_5168 [Pseudomonas aeruginosa ATCC
700888]
gi|421176910|ref|ZP_15634568.1| hypothetical protein PACI27_5120 [Pseudomonas aeruginosa CI27]
gi|115588023|gb|ABJ14038.1| putative oxidoreductase [Pseudomonas aeruginosa UCBPP-PA14]
gi|310880016|gb|EFQ38610.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|334843642|gb|EGM22228.1| hypothetical protein PA15_08012 [Pseudomonas aeruginosa 152504]
gi|348032446|dbj|BAK87806.1| hypothetical protein NCGM2_0930 [Pseudomonas aeruginosa NCGM2.S1]
gi|354824423|gb|EHF08674.1| hypothetical protein HMPREF1030_05736 [Pseudomonas sp. 2_1_26]
gi|404523502|gb|EKA33923.1| hypothetical protein PABE177_5168 [Pseudomonas aeruginosa ATCC
700888]
gi|404530280|gb|EKA40287.1| hypothetical protein PACI27_5120 [Pseudomonas aeruginosa CI27]
Length = 327
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
AQ+ T D RF ++ W E G V W + + G Q +P P +PR++G+
Sbjct: 54 GAQYFTARDRRFLDALQHWREEGWVDEWKPALYQYRDG-QLSPSPDEQPRWVGI 106
>gi|218193854|gb|EEC76281.1| hypothetical protein OsI_13783 [Oryza sativa Indica Group]
Length = 377
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIG--ELEVGDQFTPFPF--LRPRY 62
L F H A + TV++ V+GW RGLV W M + E G +FT F +Y
Sbjct: 59 LRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAG-KFTDFEKEGTIKKY 117
Query: 63 IGVNGLHPLANS 74
+GV G++ + S
Sbjct: 118 VGVPGMNSICKS 129
>gi|301607035|ref|XP_002933109.1| PREDICTED: hypothetical protein LOC100486992 [Xenopus (Silurana)
tropicalis]
Length = 393
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPR 61
I + +F H QF TV+D RF V+ + V+ W G I +L+ G + ++P
Sbjct: 53 IAGKEYVFDHTVQFFTVSDPRFAKIVSFLHSKKAVKVWTGKIVQLKKGAEPVEVKNIQP- 111
Query: 62 YIGVNGLH 69
+IG +G+
Sbjct: 112 FIGTSGMQ 119
>gi|152987397|ref|YP_001350638.1| hypothetical protein PSPA7_5306 [Pseudomonas aeruginosa PA7]
gi|150962555|gb|ABR84580.1| hypothetical protein PSPA7_5306 [Pseudomonas aeruginosa PA7]
Length = 327
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
AQ+ T D RF ++ W E G V W + + G Q +P P +PR++G+
Sbjct: 54 GAQYFTARDRRFLDALQHWREEGWVDEWQPALYQYRDG-QLSPSPDEQPRWVGI 106
>gi|383645219|ref|ZP_09957625.1| deoxyribodipyrimidine photolyase [Sphingomonas elodea ATCC 31461]
Length = 315
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 5 QPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPW 39
+ L F H AQ+ TV D RF V W +G+ PW
Sbjct: 49 EQLQFDHGAQYFTVRDDRFRRQVQDWQTQGVASPW 83
>gi|428220588|ref|YP_007104758.1| putative NAD/FAD-dependent oxidoreductase [Synechococcus sp. PCC
7502]
gi|427993928|gb|AFY72623.1| putative NAD/FAD-dependent oxidoreductase [Synechococcus sp. PCC
7502]
Length = 338
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEV-GDQFTPFPFLRPRYIGVNGLH 69
H AQ+++V++ F ++ ++G+V+ W I +L G QF+ +L PRY G+
Sbjct: 52 HGAQYVSVHNEVFGRFIHSLEQQGIVKEWTRSITQLSPDGSQFSSSGWLYPRYTSPFGMT 111
Query: 70 PLA 72
+A
Sbjct: 112 AIA 114
>gi|14718305|gb|AAK72883.1|AC091123_2 hypothetical protein [Oryza sativa Japonica Group]
Length = 347
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIG--ELEVGDQFTPFPF--LRPRY 62
L F H A + TV++ V+GW RGLV W M + E G +FT F +Y
Sbjct: 101 LRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAG-KFTDFEKEGTIKKY 159
Query: 63 IGVNGLHPLANS 74
+GV G++ + S
Sbjct: 160 VGVPGMNSICKS 171
>gi|384047404|ref|YP_005495421.1| NAD/FAD-dependent oxidoreductase-like protein [Bacillus
megaterium WSH-002]
gi|345445095|gb|AEN90112.1| NAD/FAD-dependent oxidoreductase-like protein [Bacillus
megaterium WSH-002]
Length = 317
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H AQF TV F +VN W+ V+ W F PRY +NG++
Sbjct: 52 HGAQFFTVRSDEFQQAVNKWIADRKVKKW---------------FGEHHPRYQSINGMNA 96
Query: 71 LA 72
LA
Sbjct: 97 LA 98
>gi|85374513|ref|YP_458575.1| transmembrane protein [Erythrobacter litoralis HTCC2594]
gi|84787596|gb|ABC63778.1| putative transmembrane protein [Erythrobacter litoralis HTCC2594]
Length = 310
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 5 QPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPW 39
+ + F H AQ+ T D RF +V GW G PW
Sbjct: 51 ETVTFDHGAQYFTARDPRFVEAVEGWTSAGFAAPW 85
>gi|295704129|ref|YP_003597204.1| hypothetical protein BMD_2001 [Bacillus megaterium DSM 319]
gi|294801788|gb|ADF38854.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 317
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H AQF TV F VN W+ V+ W GD PRY +NG++
Sbjct: 52 HGAQFFTVRSDEFQQDVNKWIADRKVKKW--------FGDH-------HPRYQSMNGMNA 96
Query: 71 LA 72
LA
Sbjct: 97 LA 98
>gi|294498807|ref|YP_003562507.1| hypothetical protein BMQ_2044 [Bacillus megaterium QM B1551]
gi|294348744|gb|ADE69073.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 317
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHP 70
H AQF TV F VN W+ V+ W GD PRY +NG++
Sbjct: 52 HGAQFFTVRSDEFQQDVNKWIADRKVKKW--------FGDH-------HPRYQSMNGMNA 96
Query: 71 LA 72
LA
Sbjct: 97 LA 98
>gi|289670313|ref|ZP_06491388.1| hypothetical protein XcampmN_17966 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 330
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
H AQ+ T D F V+ W++ G+ PW I + G Q + RY+GV
Sbjct: 52 HGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD-GAQLSHSHSALTRYVGV 105
>gi|78046940|ref|YP_363115.1| hypothetical protein XCV1384 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035370|emb|CAJ23015.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 331
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVN 66
H AQ+ T D F V+ W++ G+ PW I + G Q RY+GV+
Sbjct: 66 HGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD-GTQLRRSQSALMRYVGVS 120
>gi|289662806|ref|ZP_06484387.1| hypothetical protein XcampvN_06873 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 336
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
H AQ+ T D F V+ W++ G+ PW I + G Q + RY+GV
Sbjct: 58 HGAQYFTARDPAFASVVDAWIDAGIAAPWQARIASWD-GAQLSHSHSALTRYVGV 111
>gi|325926986|ref|ZP_08188261.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas perforans
91-118]
gi|325542645|gb|EGD14112.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas perforans
91-118]
Length = 344
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
H AQ+ T D F V+ W++ G+ PW I + G Q RY+GV
Sbjct: 66 HGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD-GTQLRRSQHALMRYVGV 119
>gi|418515630|ref|ZP_13081809.1| hypothetical protein MOU_02287 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707539|gb|EKQ65990.1| hypothetical protein MOU_02287 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 344
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
H AQ+ T D F V+ W++ G+ PW I + G + RY+GV
Sbjct: 66 HGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD-GTRLRRSQSALTRYVGV 119
>gi|421506151|ref|ZP_15953082.1| FAD dependent oxidoreductase [Pseudomonas mendocina DLHK]
gi|400343101|gb|EJO91480.1| FAD dependent oxidoreductase [Pseudomonas mendocina DLHK]
Length = 328
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIG 64
AQ+ T D RF V W RG PW + + G Q +P P + R++G
Sbjct: 54 GAQYFTARDRRFVEVVQQWQNRGWAEPWAPELYNSQAG-QLSPSPDEQVRWVG 105
>gi|146306109|ref|YP_001186574.1| FAD dependent oxidoreductase [Pseudomonas mendocina ymp]
gi|145574310|gb|ABP83842.1| FAD dependent oxidoreductase [Pseudomonas mendocina ymp]
Length = 328
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIG 64
AQ+ T D RF V W RG PW + + G Q +P P + R++G
Sbjct: 54 GAQYFTARDRRFVEVVQQWQNRGWAEPWAPELYNSQAG-QLSPSPDEQVRWVG 105
>gi|220934065|ref|YP_002512964.1| transmembrane protein [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995375|gb|ACL71977.1| putative transmembrane protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 329
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 QPLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGD 50
Q F AQ+ TV D F V+ WL V PW G + EL+ GD
Sbjct: 51 QGFEFDAGAQYFTVRDPVFRSYVDTWLSGQRVMPWRGWVVELDRGD 96
>gi|346724228|ref|YP_004850897.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346648975|gb|AEO41599.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 344
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
H AQ+ T D F V+ W++ G+ PW I + G Q RY+GV
Sbjct: 66 HGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD-GTQLRRSQSALMRYVGV 119
>gi|429335275|ref|ZP_19215912.1| hypothetical protein CSV86_25424 [Pseudomonas putida CSV86]
gi|428760077|gb|EKX82354.1| hypothetical protein CSV86_25424 [Pseudomonas putida CSV86]
Length = 328
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
AQ+ T D RF V W ++G V W + G Q TP P + R++GV
Sbjct: 54 GAQYFTARDRRFVEQVQHWQDKGWVAEWKPQLYNYRDG-QLTPSPDEQTRWVGV 106
>gi|108803992|ref|YP_643929.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941]
gi|108765235|gb|ABG04117.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941]
Length = 338
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 8 IFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNG 67
I AQF TV RF V GWLE G+ W G + ++ P PRY G
Sbjct: 50 ILDTGAQFFTVRSERFAGIVRGWLESGVAAEW--SRGWADASGRYEPDGH--PRYRAAGG 105
Query: 68 LHPLA 72
+ LA
Sbjct: 106 MARLA 110
>gi|326513914|dbj|BAJ92107.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIG--ELEVGDQFTPF--PFLRPRY 62
L F H A + TV++ V GW RGLV W M + E G +F F +Y
Sbjct: 128 LRFDHGAPYFTVSNDEVARVVGGWEARGLVAEWKAMFACFDRETG-KFRDFDKEGTMKKY 186
Query: 63 IGVNGLHPLANS 74
+GV G++ + S
Sbjct: 187 VGVPGMNSICKS 198
>gi|383648190|ref|ZP_09958596.1| putative phage tail protein [Sphingomonas elodea ATCC 31461]
Length = 725
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 11 HAAQFITVND-YRFHPSVNGWLER---GLVRPWGGMIGELEVGDQFT--PFPFLRPRYIG 64
A+ F+ ND RF + NG+ ER G++ WG + G G QF P PF +
Sbjct: 612 QASDFVLQNDGARFGSNANGYWERRPNGVIEQWGTINGPFTEGQQFVTFPIPFTNADSVN 671
Query: 65 VN--GLHPLANS 74
++ G++ AN+
Sbjct: 672 ISATGVNNFANN 683
>gi|325920669|ref|ZP_08182579.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas gardneri
ATCC 19865]
gi|325548859|gb|EGD19803.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas gardneri
ATCC 19865]
Length = 336
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 11 HAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGV 65
H AQ+ T D F V+ W+ G+ W + + G QF P + R++GV
Sbjct: 58 HGAQYFTARDRAFAAVVDEWIATGVAAAWPARVASWD-GIQFRPSQSVLARFVGV 111
>gi|357115159|ref|XP_003559359.1| PREDICTED: uncharacterized protein LOC100828433 [Brachypodium
distachyon]
Length = 375
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIG--ELEVGDQFTPF--PFLRPRY 62
L F H A + TV+ V+GW RGLV W M + E G +F F +Y
Sbjct: 57 LRFDHGAPYFTVSSDEVARVVSGWEARGLVAEWKAMFACFDREAG-KFRDFDKEGTTKKY 115
Query: 63 IGVNGLHPLANS 74
+GV G++ + S
Sbjct: 116 VGVPGMNSICKS 127
>gi|170746499|ref|YP_001752759.1| FAD dependent oxidoreductase [Methylobacterium radiotolerans JCM
2831]
gi|170653021|gb|ACB22076.1| FAD dependent oxidoreductase [Methylobacterium radiotolerans JCM
2831]
Length = 313
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 9 FGHAAQFITVNDYRFHPSVNGWLERGLVRPWGG 41
F H AQF+ F + W +RG+V+PW G
Sbjct: 53 FDHGAQFMRARGPAFAAQLECWAQRGIVKPWAG 85
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.149 0.504
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,387,283,916
Number of Sequences: 23463169
Number of extensions: 53355779
Number of successful extensions: 102993
Number of sequences better than 100.0: 112
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 102920
Number of HSP's gapped (non-prelim): 112
length of query: 74
length of database: 8,064,228,071
effective HSP length: 45
effective length of query: 29
effective length of database: 7,008,385,466
effective search space: 203243178514
effective search space used: 203243178514
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)