Query 040053
Match_columns 74
No_of_seqs 110 out of 266
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 98.0 4.4E-06 1.5E-10 56.4 4.3 62 5-73 52-116 (342)
2 1yvv_A Amine oxidase, flavin-c 97.6 6.2E-05 2.1E-09 50.0 4.0 67 6-73 48-114 (336)
3 3kkj_A Amine oxidase, flavin-c 96.3 0.0083 2.9E-07 36.3 4.9 63 6-69 48-110 (336)
4 2ivd_A PPO, PPOX, protoporphyr 45.9 7 0.00024 26.8 1.1 25 6-30 62-86 (478)
5 2llw_A Heat shock protein STI1 38.4 10 0.00036 20.5 0.8 19 19-37 50-68 (71)
6 4gde_A UDP-galactopyranose mut 33.6 15 0.00051 25.2 1.2 28 4-31 56-83 (513)
7 2ve8_A FTSK, DNA translocase F 32.2 33 0.0011 18.8 2.3 19 23-41 41-59 (73)
8 3dup_A MUTT/nudix family prote 32.0 18 0.00061 24.6 1.3 27 20-46 68-94 (300)
9 2b9w_A Putative aminooxidase; 28.6 20 0.00067 24.1 1.1 25 6-30 53-77 (424)
10 1lvm_A Catalytic domain of the 26.9 45 0.0015 22.1 2.5 30 12-41 183-212 (229)
11 3fst_A 5,10-methylenetetrahydr 24.2 40 0.0014 22.8 2.0 27 9-35 173-203 (304)
12 1sez_A Protoporphyrinogen oxid 22.1 25 0.00086 24.2 0.6 25 6-30 59-83 (504)
13 3oms_A PHNB protein; structura 21.8 1.1E+02 0.0038 17.7 3.5 34 15-48 86-126 (138)
14 1rij_A E6APN1 peptide; Trp-CAG 21.8 63 0.0022 13.9 1.8 12 23-34 2-13 (26)
15 4aie_A Glucan 1,6-alpha-glucos 21.6 61 0.0021 22.6 2.6 26 10-35 61-94 (549)
16 3jw4_A Transcriptional regulat 21.1 42 0.0014 19.0 1.4 28 13-40 64-91 (148)
17 1gcy_A Glucan 1,4-alpha-maltot 21.0 33 0.0011 24.5 1.1 28 9-36 74-108 (527)
18 3apt_A Methylenetetrahydrofola 20.8 40 0.0014 22.8 1.4 27 9-35 170-200 (310)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.04 E-value=4.4e-06 Score=56.35 Aligned_cols=62 Identities=16% Similarity=0.234 Sum_probs=48.9
Q ss_pred CCcccccCCceeEeCCC---chHHHHHHHHHcCceeccCCceeeeecCCcccCCCCCCCcEEeCCCCCcccc
Q 040053 5 QPLIFGHAAQFITVNDY---RFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHPLAN 73 (74)
Q Consensus 5 ~~~~~DhGAQyfta~~~---~f~~~v~~~~~~G~v~~W~~~~~~~~~~~~~~~~~~~~~ryVg~pgM~al~k 73 (74)
....+|||++||+++++ .|.++++.|.+.|++.+|........ ..+...+|+..+||++|.+
T Consensus 52 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~l~~ 116 (342)
T 3qj4_A 52 PQCTADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMV-------MKEGDCNFVAPQGISSIIK 116 (342)
T ss_dssp TTCEEESSCCCEEECSSHHHHTHHHHHHHHHTTSCEECCSCEETCC-------C--CCEEEECTTCTTHHHH
T ss_pred CCceEecCCceEEcCchHHHHHHHHHHHHHhCCCeecCchhhccee-------ccCCccceecCCCHHHHHH
Confidence 45679999999999987 89999999999999999987543221 1234568999999998865
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.58 E-value=6.2e-05 Score=50.00 Aligned_cols=67 Identities=25% Similarity=0.548 Sum_probs=54.5
Q ss_pred CcccccCCceeEeCCCchHHHHHHHHHcCceeccCCceeeeecCCcccCCCCCCCcEEeCCCCCcccc
Q 040053 6 PLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLHPLAN 73 (74)
Q Consensus 6 ~~~~DhGAQyfta~~~~f~~~v~~~~~~G~v~~W~~~~~~~~~~~~~~~~~~~~~ryVg~pgM~al~k 73 (74)
...+|+|+++|+..++.+.++++.|...+.+.+|...+.....+. +........+|++.++|..|.+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 114 (336)
T 1yvv_A 48 AGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGR-LSPSPDEQVRWVGKPGMSAITR 114 (336)
T ss_dssp TEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSSB-CCCCCTTSCEEEESSCTHHHHH
T ss_pred CCeEecCCCeEecCCHHHHHHHHHHHhCCCeeeccccceeccCcc-cccCCCCCccEEcCccHHHHHH
Confidence 446899999999999999999999999999999998777665433 3333445779999999998764
No 3
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.25 E-value=0.0083 Score=36.26 Aligned_cols=63 Identities=27% Similarity=0.561 Sum_probs=44.3
Q ss_pred CcccccCCceeEeCCCchHHHHHHHHHcCceeccCCceeeeecCCcccCCCCCCCcEEeCCCCC
Q 040053 6 PLIFGHAAQFITVNDYRFHPSVNGWLERGLVRPWGGMIGELEVGDQFTPFPFLRPRYIGVNGLH 69 (74)
Q Consensus 6 ~~~~DhGAQyfta~~~~f~~~v~~~~~~G~v~~W~~~~~~~~~~~~~~~~~~~~~ryVg~pgM~ 69 (74)
+..+|||+|||+++++.|...+..+...+....+...+....... .........++.+..++.
T Consensus 48 ~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 110 (336)
T 3kkj_A 48 AGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGR-LSPSPDEQVRWVGKPGMS 110 (336)
T ss_dssp TEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSSB-CCCCCTTSCEEEESSSTH
T ss_pred CceeecCccccccCcHHHHHHHHHHHhcccccccccccccccccc-ccccccccceeecccccc
Confidence 457999999999999999999999999999988887665543322 111122344565555543
No 4
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=45.93 E-value=7 Score=26.80 Aligned_cols=25 Identities=0% Similarity=-0.094 Sum_probs=20.2
Q ss_pred CcccccCCceeEeCCCchHHHHHHH
Q 040053 6 PLIFGHAAQFITVNDYRFHPSVNGW 30 (74)
Q Consensus 6 ~~~~DhGAQyfta~~~~f~~~v~~~ 30 (74)
+..+|+|+++|....+.+.++++++
T Consensus 62 g~~~~~g~~~~~~~~~~~~~~~~~~ 86 (478)
T 2ivd_A 62 GYLVEQGPNSFLDREPATRALAAAL 86 (478)
T ss_dssp TEEEESSCCCEETTCHHHHHHHHHT
T ss_pred CeeeecChhhhhhhhHHHHHHHHHc
Confidence 5679999999997777777777765
No 5
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=38.44 E-value=10 Score=20.53 Aligned_cols=19 Identities=11% Similarity=0.373 Sum_probs=16.4
Q ss_pred CCCchHHHHHHHHHcCcee
Q 040053 19 NDYRFHPSVNGWLERGLVR 37 (74)
Q Consensus 19 ~~~~f~~~v~~~~~~G~v~ 37 (74)
++|.+...++.|.++|+|+
T Consensus 50 ~nP~v~~~i~kl~~aGii~ 68 (71)
T 2llw_A 50 KNPEVFKKIQTLIAAGIIR 68 (71)
T ss_dssp HSHHHHHHHHHHHHTTSSC
T ss_pred hCHHHHHHHHHHHHcchhh
Confidence 4688999999999999985
No 6
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=33.58 E-value=15 Score=25.23 Aligned_cols=28 Identities=14% Similarity=0.284 Sum_probs=22.7
Q ss_pred CCCcccccCCceeEeCCCchHHHHHHHH
Q 040053 4 PQPLIFGHAAQFITVNDYRFHPSVNGWL 31 (74)
Q Consensus 4 ~~~~~~DhGAQyfta~~~~f~~~v~~~~ 31 (74)
..+..||.|+..|..+.+.+.++++++.
T Consensus 56 ~~G~~~D~G~h~~~~~~~~v~~l~~e~~ 83 (513)
T 4gde_A 56 PEGFLYDVGGHVIFSHYKYFDDCLDEAL 83 (513)
T ss_dssp TTSCEEESSCCCCCCCBHHHHHHHHHHS
T ss_pred cCCEEEEeCceEecCCCHHHHHHHHHhC
Confidence 3567899999999888888888887763
No 7
>2ve8_A FTSK, DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA-binding, winged helix, bacterial cell division; HET: DNA; 1.4A {Pseudomonas aeruginosa} SCOP: a.4.5.67 PDB: 2ve9_A* 2j5o_A*
Probab=32.18 E-value=33 Score=18.77 Aligned_cols=19 Identities=16% Similarity=0.181 Sum_probs=16.0
Q ss_pred hHHHHHHHHHcCceeccCC
Q 040053 23 FHPSVNGWLERGLVRPWGG 41 (74)
Q Consensus 23 f~~~v~~~~~~G~v~~W~~ 41 (74)
=.++++.|.+.|+|.|-.+
T Consensus 41 AArlid~lE~~GiVgp~~g 59 (73)
T 2ve8_A 41 AARMIEAMEMAGVVTPMNT 59 (73)
T ss_dssp HHHHHHHHHHTTSBCCCCT
T ss_pred HHHHHHHHHHCCcCCcccC
Confidence 3578999999999988875
No 8
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=31.97 E-value=18 Score=24.60 Aligned_cols=27 Identities=15% Similarity=0.148 Sum_probs=22.6
Q ss_pred CCchHHHHHHHHHcCceeccCCceeee
Q 040053 20 DYRFHPSVNGWLERGLVRPWGGMIGEL 46 (74)
Q Consensus 20 ~~~f~~~v~~~~~~G~v~~W~~~~~~~ 46 (74)
+..++++++.|.+.|++..|......+
T Consensus 68 t~~~~~~~~~~~~~g~~~gwr~E~~~V 94 (300)
T 3dup_A 68 TRAVADVVDRLADEGVVPAPRGELYRV 94 (300)
T ss_dssp HHHHHHHHHHHHHTTSSCCCCSCEEEE
T ss_pred HHHHHHHHHHHHHcCCCCccccccEEe
Confidence 366889999999999999999866655
No 9
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=28.63 E-value=20 Score=24.09 Aligned_cols=25 Identities=4% Similarity=-0.165 Sum_probs=19.1
Q ss_pred CcccccCCceeEeCCCchHHHHHHH
Q 040053 6 PLIFGHAAQFITVNDYRFHPSVNGW 30 (74)
Q Consensus 6 ~~~~DhGAQyfta~~~~f~~~v~~~ 30 (74)
+..+|.|+++|....+.+.++++++
T Consensus 53 G~~~d~G~~~~~~~~~~~~~l~~~~ 77 (424)
T 2b9w_A 53 GRRYEMGAIMGVPSYDTIQEIMDRT 77 (424)
T ss_dssp TEECCSSCCCBCTTCHHHHHHHHHH
T ss_pred CcccccCceeecCCcHHHHHHHHHh
Confidence 5679999999976667777777664
No 10
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=26.92 E-value=45 Score=22.08 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=26.0
Q ss_pred CCceeEeCCCchHHHHHHHHHcCceeccCC
Q 040053 12 AAQFITVNDYRFHPSVNGWLERGLVRPWGG 41 (74)
Q Consensus 12 GAQyfta~~~~f~~~v~~~~~~G~v~~W~~ 41 (74)
..-||++=+++|..+++...+.-+++.|.-
T Consensus 183 ~~NyF~~f~~~f~~~L~~~~~~~w~k~W~f 212 (229)
T 1lvm_A 183 TNNYFTSVPKNFMELLTNQEAQQWVSGWRL 212 (229)
T ss_dssp CSEEEEECCTTHHHHHHCGGGCCEEESCCC
T ss_pred CeEEEeCCCHHHHHHHhcccccccccCcEE
Confidence 467999999999999998888889999974
No 11
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=24.22 E-value=40 Score=22.82 Aligned_cols=27 Identities=7% Similarity=0.005 Sum_probs=22.2
Q ss_pred cccCCceeEeCC----CchHHHHHHHHHcCc
Q 040053 9 FGHAAQFITVND----YRFHPSVNGWLERGL 35 (74)
Q Consensus 9 ~DhGAQyfta~~----~~f~~~v~~~~~~G~ 35 (74)
+|.||.||--.- +.|.++++...+.|+
T Consensus 173 vdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi 203 (304)
T 3fst_A 173 VDAGANRAITQFFFDVESYLRFRDRCVSAGI 203 (304)
T ss_dssp HHHTCCEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEeCccCCHHHHHHHHHHHHhcCC
Confidence 688999987644 778899999988886
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=22.07 E-value=25 Score=24.22 Aligned_cols=25 Identities=16% Similarity=0.178 Sum_probs=19.9
Q ss_pred CcccccCCceeEeCCCchHHHHHHH
Q 040053 6 PLIFGHAAQFITVNDYRFHPSVNGW 30 (74)
Q Consensus 6 ~~~~DhGAQyfta~~~~f~~~v~~~ 30 (74)
+..+|.|+++|....+.+.++++++
T Consensus 59 g~~~~~g~~~~~~~~~~~~~~~~~l 83 (504)
T 1sez_A 59 GLIWDEGANTMTESEGDVTFLIDSL 83 (504)
T ss_dssp TEEEESSCCCBCCCSHHHHHHHHHT
T ss_pred CeEEecCCcccccCcHHHHHHHHHc
Confidence 5679999999987777777777764
No 13
>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0
Probab=21.80 E-value=1.1e+02 Score=17.73 Aligned_cols=34 Identities=15% Similarity=0.302 Sum_probs=21.8
Q ss_pred eeEeCC-CchHHHHHHHHHcCce------eccCCceeeeec
Q 040053 15 FITVND-YRFHPSVNGWLERGLV------RPWGGMIGELEV 48 (74)
Q Consensus 15 yfta~~-~~f~~~v~~~~~~G~v------~~W~~~~~~~~~ 48 (74)
||.+.+ ++..++++.|.+.|.+ .+|..+.+.+..
T Consensus 86 ~l~~~d~~evd~~~~~l~~Gg~v~~p~~~~~wg~~~~~~~D 126 (138)
T 3oms_A 86 YVTCETEEEIDTVFHKLAQDGAILMPLGSYPFSKKFGWLND 126 (138)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEEC
T ss_pred EEEcCCHHHHHHHHHHHHcCCeEecCcccccCCcEEEEEEC
Confidence 455555 3478888888666655 467776666643
No 14
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=21.76 E-value=63 Score=13.92 Aligned_cols=12 Identities=25% Similarity=0.764 Sum_probs=8.0
Q ss_pred hHHHHHHHHHcC
Q 040053 23 FHPSVNGWLERG 34 (74)
Q Consensus 23 f~~~v~~~~~~G 34 (74)
.+.++-+|+..|
T Consensus 2 lqellgqwlkdg 13 (26)
T 1rij_A 2 LQELLGQWLKDG 13 (26)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 466777777654
No 15
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=21.61 E-value=61 Score=22.57 Aligned_cols=26 Identities=4% Similarity=0.144 Sum_probs=21.0
Q ss_pred ccC---CceeEeCC-----CchHHHHHHHHHcCc
Q 040053 10 GHA---AQFITVND-----YRFHPSVNGWLERGL 35 (74)
Q Consensus 10 DhG---AQyfta~~-----~~f~~~v~~~~~~G~ 35 (74)
||| .-|+.+.+ ++|+++|+++.++|+
T Consensus 61 ~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi 94 (549)
T 4aie_A 61 DNGYDISDYEAIDPQYGTMADMDELISKAKEHHI 94 (549)
T ss_dssp TTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTC
T ss_pred CCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCC
Confidence 566 56777755 679999999999987
No 16
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=21.05 E-value=42 Score=19.03 Aligned_cols=28 Identities=18% Similarity=0.244 Sum_probs=17.7
Q ss_pred CceeEeCCCchHHHHHHHHHcCceeccC
Q 040053 13 AQFITVNDYRFHPSVNGWLERGLVRPWG 40 (74)
Q Consensus 13 AQyfta~~~~f~~~v~~~~~~G~v~~W~ 40 (74)
|..+.++.+.....|+.|.+.|+|..-.
T Consensus 64 a~~l~~~~~~vs~~l~~L~~~Glv~r~~ 91 (148)
T 3jw4_A 64 AQFFGRRGASITSMLQGLEKKGYIERRI 91 (148)
T ss_dssp HHC------CHHHHHHHHHHTTSBCCC-
T ss_pred HHHHCCChhHHHHHHHHHHHCCCEEeeC
Confidence 4455667788899999999999997653
No 17
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.00 E-value=33 Score=24.46 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=22.9
Q ss_pred cccCCceeEeC--C-----CchHHHHHHHHHcCce
Q 040053 9 FGHAAQFITVN--D-----YRFHPSVNGWLERGLV 36 (74)
Q Consensus 9 ~DhGAQyfta~--~-----~~f~~~v~~~~~~G~v 36 (74)
-+||=+|+.+. + ++|+++|+++.++|+-
T Consensus 74 ~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~ 108 (527)
T 1gcy_A 74 GGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVK 108 (527)
T ss_dssp CCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCE
T ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 57887788777 4 5799999999999864
No 18
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=20.78 E-value=40 Score=22.77 Aligned_cols=27 Identities=7% Similarity=0.065 Sum_probs=22.4
Q ss_pred cccCCceeEeCC----CchHHHHHHHHHcCc
Q 040053 9 FGHAAQFITVND----YRFHPSVNGWLERGL 35 (74)
Q Consensus 9 ~DhGAQyfta~~----~~f~~~v~~~~~~G~ 35 (74)
+|.||.||-..- +.|.++++...+.|+
T Consensus 170 v~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi 200 (310)
T 3apt_A 170 VEAGLDFAITQLFFNNAHYFGFLERARRAGI 200 (310)
T ss_dssp HHHHCSEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEecccCCHHHHHHHHHHHHHcCC
Confidence 688999987643 779999999988886
Done!