Query 040053
Match_columns 74
No_of_seqs 110 out of 266
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 06:57:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040053.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040053hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1seza1 c.3.1.2 (A:13-329,A:44 82.1 0.17 1.3E-05 29.6 0.6 26 5-30 46-71 (373)
2 d1b5qa1 c.3.1.2 (A:5-293,A:406 69.0 1.1 8.4E-05 25.0 1.8 28 6-33 47-74 (347)
3 d2ivda1 c.3.1.2 (A:10-306,A:41 65.4 1 7.6E-05 26.1 1.1 26 6-31 46-71 (347)
4 d2dw4a2 c.3.1.2 (A:274-654,A:7 63.9 1.7 0.00013 25.3 1.9 25 6-30 51-76 (449)
5 d2iida1 c.3.1.2 (A:4-319,A:433 50.4 3 0.00022 24.6 1.3 28 4-31 76-103 (370)
6 d2v5za1 c.3.1.2 (A:6-289,A:402 47.4 3.2 0.00024 24.7 1.2 26 5-30 45-70 (383)
7 d1tdha3 g.39.1.8 (A:247-290) E 41.3 3.6 0.00026 19.4 0.5 12 61-73 16-27 (44)
8 d1efub4 d.43.1.1 (B:55-139) El 33.8 3.7 0.00027 21.7 -0.2 18 16-33 27-44 (85)
9 d1f5ja_ b.29.1.11 (A:) Xylanas 30.0 17 0.0012 22.1 2.5 22 14-35 139-167 (199)
10 d1h4ga_ b.29.1.11 (A:) Xylanas 29.9 19 0.0014 22.0 2.7 23 13-35 142-171 (206)
11 d2j5pa1 a.4.5.67 (A:1261-1329) 28.0 13 0.00097 18.9 1.5 19 23-41 38-56 (69)
12 d1xyna_ b.29.1.11 (A:) Xylanas 27.7 22 0.0016 21.2 2.7 23 14-36 123-152 (178)
13 d2dfba1 b.29.1.11 (A:1-190) Xy 27.6 22 0.0016 21.4 2.7 23 13-35 135-164 (190)
14 d1m4wa_ b.29.1.11 (A:) Xylanas 27.5 22 0.0016 21.5 2.7 23 13-35 134-163 (197)
15 d2v9va2 a.4.5.35 (A:438-510) C 27.0 19 0.0014 17.6 2.0 19 20-38 42-60 (73)
16 d1ozha3 c.36.1.9 (A:367-558) C 27.0 25 0.0018 20.2 2.9 25 10-34 141-166 (192)
17 d1xnka1 b.29.1.11 (A:1-191) Xy 26.8 23 0.0017 21.3 2.7 22 14-35 137-165 (191)
18 d1ynaa_ b.29.1.11 (A:) Xylanas 26.8 24 0.0017 21.4 2.7 23 13-35 135-164 (194)
19 d2ve8a1 a.4.5.67 (A:745-811) D 26.5 23 0.0017 17.8 2.3 19 23-41 35-53 (67)
20 d1te1b_ b.29.1.11 (B:) Xylanas 26.2 25 0.0018 21.1 2.8 23 13-35 135-164 (190)
21 d1t6gc_ b.29.1.11 (C:) Xylanas 25.9 22 0.0016 21.3 2.4 23 13-35 127-156 (182)
22 d2hoea1 a.4.5.63 (A:10-71) N-a 25.5 15 0.0011 17.7 1.4 18 21-38 27-44 (62)
23 d1uoka2 c.1.8.1 (A:1-479) Olig 24.3 21 0.0015 22.6 2.2 27 10-36 60-94 (479)
24 d1xb2b2 d.43.1.1 (B:112-222) E 24.0 5.9 0.00043 21.6 -0.5 18 16-33 29-46 (111)
25 d1b5ta_ c.1.23.1 (A:) Methylen 21.3 17 0.0012 22.5 1.3 28 9-36 153-184 (275)
26 d1m7xa3 c.1.8.1 (A:227-622) 1, 21.3 22 0.0016 21.3 1.8 24 13-36 77-105 (396)
27 d1ztwa1 e.8.1.2 (A:24-278) MML 20.2 19 0.0013 21.9 1.3 20 21-40 49-68 (255)
No 1
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=82.06 E-value=0.17 Score=29.61 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=21.7
Q ss_pred CCcccccCCceeEeCCCchHHHHHHH
Q 040053 5 QPLIFGHAAQFITVNDYRFHPSVNGW 30 (74)
Q Consensus 5 ~~~~~DhGAQyfta~~~~f~~~v~~~ 30 (74)
++..+|+|+++|+...+.+.++++++
T Consensus 46 ~g~~~d~G~~~~~~~~~~~~~~~~~~ 71 (373)
T d1seza1 46 DGLIWDEGANTMTESEGDVTFLIDSL 71 (373)
T ss_dssp TTEEEESSCCCBCCCSHHHHHHHHHT
T ss_pred CCEEEecCceEEeCCCHHHHHHHHHh
Confidence 35679999999999888888887764
No 2
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}
Probab=68.98 E-value=1.1 Score=25.01 Aligned_cols=28 Identities=4% Similarity=-0.102 Sum_probs=19.6
Q ss_pred CcccccCCceeEeCCCchHHHHHHHHHc
Q 040053 6 PLIFGHAAQFITVNDYRFHPSVNGWLER 33 (74)
Q Consensus 6 ~~~~DhGAQyfta~~~~f~~~v~~~~~~ 33 (74)
+..+|+|+++|+.........+.++...
T Consensus 47 g~~~d~G~~~~~~~~~~~~~~~~~~~~~ 74 (347)
T d1b5qa1 47 GINVELGANWVEGVNGGKMNPIWPIVNS 74 (347)
T ss_dssp TEEEESSCCEEEEESSSSCCTHHHHHHT
T ss_pred CEEEecCCeEEeccchhhhhHHHhhhcc
Confidence 5679999999998776555555554443
No 3
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}
Probab=65.36 E-value=1 Score=26.11 Aligned_cols=26 Identities=0% Similarity=-0.129 Sum_probs=21.5
Q ss_pred CcccccCCceeEeCCCchHHHHHHHH
Q 040053 6 PLIFGHAAQFITVNDYRFHPSVNGWL 31 (74)
Q Consensus 6 ~~~~DhGAQyfta~~~~f~~~v~~~~ 31 (74)
+..+|+|+++|....+.+..+++.+.
T Consensus 46 g~~~d~G~~~~~~~~~~~~~l~~~~~ 71 (347)
T d2ivda1 46 GYLVEQGPNSFLDREPATRALAAALN 71 (347)
T ss_dssp TEEEESSCCCEETTCHHHHHHHHHTT
T ss_pred CEEEecCceEEecCCHHHHHHHHHhc
Confidence 56799999999998888888877653
No 4
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.90 E-value=1.7 Score=25.25 Aligned_cols=25 Identities=8% Similarity=-0.066 Sum_probs=18.7
Q ss_pred CcccccCCceeEe-CCCchHHHHHHH
Q 040053 6 PLIFGHAAQFITV-NDYRFHPSVNGW 30 (74)
Q Consensus 6 ~~~~DhGAQyfta-~~~~f~~~v~~~ 30 (74)
+..||+|+++|.- ..+.+.++++++
T Consensus 51 g~~~d~G~~~i~~~~~~~~~~l~~~l 76 (449)
T d2dw4a2 51 NYVADLGAMVVTGLGGNPMAVVSKQV 76 (449)
T ss_dssp TEEEESSCCEECCSBTCHHHHHHHHH
T ss_pred CEEEECCCEEECCCCCcHHHHHHHHc
Confidence 5679999999974 445677777765
No 5
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=50.40 E-value=3 Score=24.59 Aligned_cols=28 Identities=0% Similarity=-0.148 Sum_probs=22.5
Q ss_pred CCCcccccCCceeEeCCCchHHHHHHHH
Q 040053 4 PQPLIFGHAAQFITVNDYRFHPSVNGWL 31 (74)
Q Consensus 4 ~~~~~~DhGAQyfta~~~~f~~~v~~~~ 31 (74)
..+..+|+|++++....+.+.++++++.
T Consensus 76 ~~g~~~d~G~~~~~~~~~~~~~l~~~~~ 103 (370)
T d2iida1 76 EAGWYANLGPMRLPEKHRIVREYIRKFD 103 (370)
T ss_dssp TTTEEEESSCCCEETTCHHHHHHHHHTT
T ss_pred CCCceeccCceeecCccHHHHHHHHHhC
Confidence 3467899999999988888888887653
No 6
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.36 E-value=3.2 Score=24.70 Aligned_cols=26 Identities=4% Similarity=0.027 Sum_probs=19.5
Q ss_pred CCcccccCCceeEeCCCchHHHHHHH
Q 040053 5 QPLIFGHAAQFITVNDYRFHPSVNGW 30 (74)
Q Consensus 5 ~~~~~DhGAQyfta~~~~f~~~v~~~ 30 (74)
.+..+|+|+++|....+.+.++++++
T Consensus 45 ~g~~~d~G~~~~~~~~~~~~~l~~~l 70 (383)
T d2v5za1 45 KVKYVDLGGSYVGPTQNRILRLAKEL 70 (383)
T ss_dssp TTSCEESSCCEECTTCHHHHHHHHHT
T ss_pred CCcEEeCCceEeCCCChHHHHHHHHc
Confidence 35568999999987777777766654
No 7
>d1tdha3 g.39.1.8 (A:247-290) Endonuclease VIII-like 1 (NEIL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.25 E-value=3.6 Score=19.36 Aligned_cols=12 Identities=33% Similarity=0.791 Sum_probs=9.2
Q ss_pred cEEeCCCCCcccc
Q 040053 61 RYIGVNGLHPLAN 73 (74)
Q Consensus 61 ryVg~pgM~al~k 73 (74)
+| .+|||++|..
T Consensus 16 CY-~~pgM~sL~D 27 (44)
T d1tdha3 16 CY-GMPGMSSLQD 27 (44)
T ss_dssp ST-TCTTCEEEEC
T ss_pred HH-cCCchhhhhc
Confidence 45 7899999864
No 8
>d1efub4 d.43.1.1 (B:55-139) Elongation factor Ts (EF-Ts), dimerisation domain {Escherichia coli [TaxId: 562]}
Probab=33.75 E-value=3.7 Score=21.67 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=14.4
Q ss_pred eEeCCCchHHHHHHHHHc
Q 040053 16 ITVNDYRFHPSVNGWLER 33 (74)
Q Consensus 16 fta~~~~f~~~v~~~~~~ 33 (74)
|-++++.|++|++.+.+.
T Consensus 27 FVAkne~F~~l~~~i~~~ 44 (85)
T d1efub4 27 FVAKDAGFQAFADKVLDA 44 (85)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred chhcchHHHHHHHHHHHH
Confidence 557889999999987654
No 9
>d1f5ja_ b.29.1.11 (A:) Xylanase II {Dictyoglomus thermophilum [TaxId: 14]}
Probab=29.95 E-value=17 Score=22.09 Aligned_cols=22 Identities=27% Similarity=0.578 Sum_probs=18.7
Q ss_pred ceeEeCCC-------chHHHHHHHHHcCc
Q 040053 14 QFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 14 Qyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
|||.+|.. .|...++.|.+.|+
T Consensus 139 QYwSVR~~kR~~GTIt~~~Hf~aW~~~Gm 167 (199)
T d1f5ja_ 139 QYWSVRTSKRTSGTVTVTDHFRAWANRGL 167 (199)
T ss_dssp EEEEEESSCCSEEEEEHHHHHHHHHTTTC
T ss_pred EEEEeccCCCCCcEEeHHHHHHHHHHcCC
Confidence 89999874 38889999999987
No 10
>d1h4ga_ b.29.1.11 (A:) Xylanase II {Bacillus agaradhaerens [TaxId: 76935]}
Probab=29.93 E-value=19 Score=22.00 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=19.2
Q ss_pred CceeEeCCC-------chHHHHHHHHHcCc
Q 040053 13 AQFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 13 AQyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
-|||.+|.. .|...++.|.+.|+
T Consensus 142 ~QYwSVR~~kR~~GTIt~~~HF~aW~~~Gm 171 (206)
T d1h4ga_ 142 KQYWSVRRSKRTSGTISVSNHFRAWENLGM 171 (206)
T ss_dssp EEEEEEESSCCSEEEECHHHHHHHHHHTTC
T ss_pred EEEEEeccCCCCCcEEeHHHHHHHHHHcCC
Confidence 399999874 38889999999987
No 11
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia coli [TaxId: 562]}
Probab=28.03 E-value=13 Score=18.86 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=15.6
Q ss_pred hHHHHHHHHHcCceeccCC
Q 040053 23 FHPSVNGWLERGLVRPWGG 41 (74)
Q Consensus 23 f~~~v~~~~~~G~v~~W~~ 41 (74)
=.++++.|.+.|+|.|=.+
T Consensus 38 Aariid~LE~~GiVsp~~~ 56 (69)
T d2j5pa1 38 AARIIEQMEAQGIVSEQGH 56 (69)
T ss_dssp HHHHHHHHHHHTSBCCCCS
T ss_pred HHHHHHHHHHCCcCCCCCC
Confidence 4578999999999987654
No 12
>d1xyna_ b.29.1.11 (A:) Xylanase II {Trichoderma reesei, xynI [TaxId: 51453]}
Probab=27.73 E-value=22 Score=21.19 Aligned_cols=23 Identities=30% Similarity=0.599 Sum_probs=18.9
Q ss_pred ceeEeCCC-------chHHHHHHHHHcCce
Q 040053 14 QFITVNDY-------RFHPSVNGWLERGLV 36 (74)
Q Consensus 14 Qyfta~~~-------~f~~~v~~~~~~G~v 36 (74)
|||.+|.+ .+...++.|.+.|+-
T Consensus 123 QYwSVR~~~R~~GTIt~~~HF~aW~~~Gm~ 152 (178)
T d1xyna_ 123 QYISVRNSPRTSGTVTVQNHFNAWASLGLH 152 (178)
T ss_dssp EEEEEESSCCSSEEECHHHHHHHHHHTTCC
T ss_pred EEEEeccCCCCCcEEeHHHHHHHHHHcCCC
Confidence 99999874 378888999999873
No 13
>d2dfba1 b.29.1.11 (A:1-190) Xylanase II {Trichoderma reesei, xynII [TaxId: 51453]}
Probab=27.61 E-value=22 Score=21.40 Aligned_cols=23 Identities=26% Similarity=0.504 Sum_probs=19.0
Q ss_pred CceeEeCCC-------chHHHHHHHHHcCc
Q 040053 13 AQFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 13 AQyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
-|||.+|.. .+...++.|.+.|+
T Consensus 135 ~QYwSVR~~~R~~GTIt~~~HF~aW~~~Gm 164 (190)
T d2dfba1 135 YQYWSVRRNHRSSGSVNTANHFNAWAQQGL 164 (190)
T ss_dssp EEEEEEESSCCSSEEEEHHHHHHHHHHTTC
T ss_pred EEEEEeccCCCCCcEEeHHHHHHHHHHcCC
Confidence 389999873 38888999999987
No 14
>d1m4wa_ b.29.1.11 (A:) Xylanase II {Nonomuraea flexuosa [TaxId: 103836]}
Probab=27.48 E-value=22 Score=21.52 Aligned_cols=23 Identities=22% Similarity=0.514 Sum_probs=19.1
Q ss_pred CceeEeCCC-------chHHHHHHHHHcCc
Q 040053 13 AQFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 13 AQyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
-|||.+|.. .+...++.|.+.|+
T Consensus 134 ~QYwSVR~~kR~~GTIt~~~HF~aW~~~Gm 163 (197)
T d1m4wa_ 134 QQFWSVRQQKRTSGTITIGNHFDAWARAGM 163 (197)
T ss_dssp EEEEEEESSCCSEEEEEHHHHHHHHHHTTC
T ss_pred EEEEEEccCCCCCcEEeHHHHHHHHHHcCC
Confidence 399999874 38888999999987
No 15
>d2v9va2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=27.02 E-value=19 Score=17.61 Aligned_cols=19 Identities=11% Similarity=0.363 Sum_probs=16.1
Q ss_pred CCchHHHHHHHHHcCceec
Q 040053 20 DYRFHPSVNGWLERGLVRP 38 (74)
Q Consensus 20 ~~~f~~~v~~~~~~G~v~~ 38 (74)
...|..+++.|++.|.|..
T Consensus 42 ~~~f~~lL~~l~~~g~l~~ 60 (73)
T d2v9va2 42 ARVYQALLEEWSREGRLQL 60 (73)
T ss_dssp HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHCCChhe
Confidence 4569999999999999864
No 16
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=27.01 E-value=25 Score=20.25 Aligned_cols=25 Identities=12% Similarity=0.224 Sum_probs=19.5
Q ss_pred ccCCceeEeCC-CchHHHHHHHHHcC
Q 040053 10 GHAAQFITVND-YRFHPSVNGWLERG 34 (74)
Q Consensus 10 DhGAQyfta~~-~~f~~~v~~~~~~G 34 (74)
-+|+.|+++++ +++.+.+++.++.+
T Consensus 141 a~G~~~~~v~~~~el~~al~~a~~~~ 166 (192)
T d1ozha3 141 SFGAKGFAVESAEALEPTLRAAMDVD 166 (192)
T ss_dssp TTTSEEEECCSGGGHHHHHHHHHHSS
T ss_pred HhccccEEeCCHHHHHHHHHHHHHcC
Confidence 47899999988 67888888776653
No 17
>d1xnka1 b.29.1.11 (A:1-191) Xylanase II {Chaetomium thermophilum [TaxId: 209285]}
Probab=26.84 E-value=23 Score=21.32 Aligned_cols=22 Identities=27% Similarity=0.560 Sum_probs=18.6
Q ss_pred ceeEeCCC-------chHHHHHHHHHcCc
Q 040053 14 QFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 14 Qyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
|||.+|.. .+...++.|.+.|+
T Consensus 137 QYwSVR~~kR~sGTIt~~~HF~aW~~~Gm 165 (191)
T d1xnka1 137 QYWSVRTSKRTGGTVTMANHFNAWRQAGL 165 (191)
T ss_dssp EEEEEESSCCSEEEEEHHHHHHHHHHTTC
T ss_pred EEEEEccCCCCCcEEeHHHHHHHHHHcCC
Confidence 89999874 38888899999987
No 18
>d1ynaa_ b.29.1.11 (A:) Xylanase II {Thermomyces lanuginosus [TaxId: 5541]}
Probab=26.78 E-value=24 Score=21.36 Aligned_cols=23 Identities=22% Similarity=0.433 Sum_probs=18.8
Q ss_pred CceeEeCCC-------chHHHHHHHHHcCc
Q 040053 13 AQFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 13 AQyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
-|||.+|.. .+...++.|.+.|+
T Consensus 135 ~QYwSVR~~kR~~GTIt~~~Hf~aW~~~Gm 164 (194)
T d1ynaa_ 135 DQYWSVRQDKRTSGTVQTGCHFDAWARAGL 164 (194)
T ss_dssp EEEEEEESSCCSSEEEEHHHHHHHHHHTTC
T ss_pred EEEEEEccCCCCCcEEeHHHHHHHHHHCCC
Confidence 399999874 38888999999886
No 19
>d2ve8a1 a.4.5.67 (A:745-811) DNA translocase FtsK {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.55 E-value=23 Score=17.75 Aligned_cols=19 Identities=16% Similarity=0.181 Sum_probs=15.6
Q ss_pred hHHHHHHHHHcCceeccCC
Q 040053 23 FHPSVNGWLERGLVRPWGG 41 (74)
Q Consensus 23 f~~~v~~~~~~G~v~~W~~ 41 (74)
=.++++.|.+.|+|.+=.+
T Consensus 35 Aariid~LE~~GiVsp~~g 53 (67)
T d2ve8a1 35 AARMIEAMEMAGVVTPMNT 53 (67)
T ss_dssp HHHHHHHHHHTTSBCCCCT
T ss_pred HHHHHHHHHHCcCCCCCCC
Confidence 3578999999999987664
No 20
>d1te1b_ b.29.1.11 (B:) Xylanase II {Penicillium funiculosum [TaxId: 28572]}
Probab=26.24 E-value=25 Score=21.13 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=19.0
Q ss_pred CceeEeCCC-------chHHHHHHHHHcCc
Q 040053 13 AQFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 13 AQyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
-|||.+|.. .+...++.|.+.|+
T Consensus 135 ~QYwSVR~~kR~sGTIt~~~HF~aW~~~Gm 164 (190)
T d1te1b_ 135 NQYWSVRTEKRVGGTVTTANHFAAWKALGL 164 (190)
T ss_dssp EEEEECCSSCCSEEEEEHHHHHHHHHHTTC
T ss_pred EEEEEEccCCCCCcEEeHHHHHHHHHHcCC
Confidence 399999874 37888899999987
No 21
>d1t6gc_ b.29.1.11 (C:) Xylanase II {Aspergillus kawachii [TaxId: 40384]}
Probab=25.88 E-value=22 Score=21.29 Aligned_cols=23 Identities=22% Similarity=0.522 Sum_probs=18.9
Q ss_pred CceeEeCCC-------chHHHHHHHHHcCc
Q 040053 13 AQFITVNDY-------RFHPSVNGWLERGL 35 (74)
Q Consensus 13 AQyfta~~~-------~f~~~v~~~~~~G~ 35 (74)
-|||.+|.. .+...++.|.+.|+
T Consensus 127 ~QYwSVR~~kR~~GTIt~~~HF~aW~~~Gm 156 (182)
T d1t6gc_ 127 TQYFSVRESTRTSGTVTVANHFNFWAQHGF 156 (182)
T ss_dssp EEEEEEESSCCSEEEECHHHHHHHHGGGTC
T ss_pred EEEEEeccCCCCCCEEcHHHHHHHHHHcCC
Confidence 389999874 37888899999887
No 22
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=25.54 E-value=15 Score=17.66 Aligned_cols=18 Identities=22% Similarity=0.278 Sum_probs=14.7
Q ss_pred CchHHHHHHHHHcCceec
Q 040053 21 YRFHPSVNGWLERGLVRP 38 (74)
Q Consensus 21 ~~f~~~v~~~~~~G~v~~ 38 (74)
+.-...+++|++.|+|.+
T Consensus 27 ~TVs~~v~~L~~~GlV~e 44 (62)
T d2hoea1 27 TTVGEIAKIFLEKGIVVE 44 (62)
T ss_dssp HHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 345678999999999976
No 23
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]}
Probab=24.31 E-value=21 Score=22.59 Aligned_cols=27 Identities=7% Similarity=0.230 Sum_probs=20.8
Q ss_pred ccC---CceeEeCC-----CchHHHHHHHHHcCce
Q 040053 10 GHA---AQFITVND-----YRFHPSVNGWLERGLV 36 (74)
Q Consensus 10 DhG---AQyfta~~-----~~f~~~v~~~~~~G~v 36 (74)
+|| .-|+.+.. ++|+++|+.+.++|+-
T Consensus 60 ~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~ 94 (479)
T d1uoka2 60 DNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMK 94 (479)
T ss_dssp TTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred CCCcCccccCCcCcccCCHHHHHHHHHHHHHCCCE
Confidence 455 55666654 6799999999999984
No 24
>d1xb2b2 d.43.1.1 (B:112-222) Elongation factor Ts (EF-Ts), dimerisation domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=23.99 E-value=5.9 Score=21.58 Aligned_cols=18 Identities=11% Similarity=0.124 Sum_probs=14.3
Q ss_pred eEeCCCchHHHHHHHHHc
Q 040053 16 ITVNDYRFHPSVNGWLER 33 (74)
Q Consensus 16 fta~~~~f~~~v~~~~~~ 33 (74)
|-+|++.|+.|++.+...
T Consensus 29 FVArn~~F~~la~~ia~~ 46 (111)
T d1xb2b2 29 FVSRNLKFQQLVQQVALG 46 (111)
T ss_dssp HHHTSHHHHHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHH
Confidence 557889999999987653
No 25
>d1b5ta_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Escherichia coli [TaxId: 562]}
Probab=21.30 E-value=17 Score=22.46 Aligned_cols=28 Identities=7% Similarity=0.007 Sum_probs=22.3
Q ss_pred cccCCceeEe----CCCchHHHHHHHHHcCce
Q 040053 9 FGHAAQFITV----NDYRFHPSVNGWLERGLV 36 (74)
Q Consensus 9 ~DhGAQyfta----~~~~f~~~v~~~~~~G~v 36 (74)
+|.||.||.. ..+.|.++++.+.+.|+-
T Consensus 153 ~~aGA~fiiTQ~~fD~~~~~~~~~~~~~~gi~ 184 (275)
T d1b5ta_ 153 VDAGANRAITQFFFDVESYLRFRDRCVSAGID 184 (275)
T ss_dssp HHHTCCEEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred HHhhcCeeeeeeeecHHHHHHHHHHHHHcCCC
Confidence 6889999865 337788999999988873
No 26
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]}
Probab=21.25 E-value=22 Score=21.26 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=18.6
Q ss_pred CceeEeCC-----CchHHHHHHHHHcCce
Q 040053 13 AQFITVND-----YRFHPSVNGWLERGLV 36 (74)
Q Consensus 13 AQyfta~~-----~~f~~~v~~~~~~G~v 36 (74)
.-|+.+.+ ++|++||+.+.++|+-
T Consensus 77 ~d~~~vdp~~Gt~~d~~~LV~~aH~~gi~ 105 (396)
T d1m7xa3 77 TGLYAPTRRFGTRDDFRYFIDAAHAAGLN 105 (396)
T ss_dssp SEEEEECGGGSCHHHHHHHHHHHHHTTCE
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhhhhhh
Confidence 34566644 6799999999999985
No 27
>d1ztwa1 e.8.1.2 (A:24-278) MMLV reverse transcriptase {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=20.22 E-value=19 Score=21.92 Aligned_cols=20 Identities=20% Similarity=0.552 Sum_probs=15.8
Q ss_pred CchHHHHHHHHHcCceeccC
Q 040053 21 YRFHPSVNGWLERGLVRPWG 40 (74)
Q Consensus 21 ~~f~~~v~~~~~~G~v~~W~ 40 (74)
+..++.+++|+++|+|++-.
T Consensus 49 ~~l~~~i~~ll~~G~I~p~~ 68 (255)
T d1ztwa1 49 LGIKPHIQRLLDQGILVPCQ 68 (255)
T ss_dssp HHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHhhhceeeecC
Confidence 34678899999999997644
Done!