Query 040055
Match_columns 387
No_of_seqs 400 out of 3714
Neff 9.3
Searched_HMMs 13730
Date Mon Mar 25 06:59:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040055.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040055hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 1.3E-30 9.4E-35 233.7 16.7 177 6-186 3-233 (255)
2 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 9.3E-30 6.7E-34 224.3 18.4 174 3-184 28-208 (223)
3 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 3.4E-28 2.5E-32 217.8 16.9 158 5-165 38-248 (255)
4 d1s70b_ d.211.1.1 (B:) Myosin 99.9 1.7E-26 1.3E-30 210.6 18.1 168 10-184 38-271 (291)
5 d1uoha_ d.211.1.1 (A:) 26S pro 99.9 3.9E-26 2.8E-30 200.8 18.5 167 12-185 3-176 (223)
6 d1ixva_ d.211.1.1 (A:) 26S pro 99.9 9.5E-26 6.9E-30 198.3 19.1 174 6-183 28-211 (229)
7 d1iknd_ d.211.1.1 (D:) I-kappa 99.9 3E-26 2.2E-30 201.1 15.4 166 11-183 1-183 (221)
8 d1iknd_ d.211.1.1 (D:) I-kappa 99.9 2.9E-25 2.1E-29 194.7 17.6 152 3-157 30-186 (221)
9 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 2.4E-25 1.7E-29 184.1 15.8 138 14-157 3-141 (156)
10 d2fo1e1 d.211.1.1 (E:1021-1297 99.9 8.5E-26 6.2E-30 204.1 12.6 177 4-187 24-263 (277)
11 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 4.7E-25 3.4E-29 182.8 15.4 139 14-158 4-142 (156)
12 d1k1aa_ d.211.1.1 (A:) bcl-3 { 99.9 1.9E-24 1.4E-28 187.3 19.5 169 10-185 1-217 (228)
13 d1awcb_ d.211.1.1 (B:) GA bind 99.9 1.1E-24 8.2E-29 179.4 16.5 143 12-160 2-144 (153)
14 d1s70b_ d.211.1.1 (B:) Myosin 99.9 8.5E-25 6.2E-29 199.2 16.6 152 2-157 63-273 (291)
15 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 2.6E-25 1.9E-29 204.6 13.1 153 2-157 96-300 (301)
16 d2fo1e1 d.211.1.1 (E:1021-1297 99.9 1.4E-24 1.1E-28 195.9 17.7 155 2-159 64-264 (277)
17 d1wdya_ d.211.1.1 (A:) RNase L 99.9 9.8E-24 7.1E-28 191.2 17.3 169 11-183 4-258 (285)
18 d1ixva_ d.211.1.1 (A:) 26S pro 99.9 2E-23 1.4E-27 183.3 18.5 170 13-186 1-180 (229)
19 d1n11a_ d.211.1.1 (A:) Ankyrin 99.9 1E-23 7.5E-28 200.7 18.0 163 14-183 2-203 (408)
20 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 7.4E-25 5.4E-29 172.9 8.0 107 49-157 3-109 (118)
21 d1n11a_ d.211.1.1 (A:) Ankyrin 99.9 3.1E-23 2.3E-27 197.4 20.0 179 2-185 155-370 (408)
22 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 3.3E-24 2.4E-28 170.9 10.8 121 11-137 2-123 (125)
23 d1ot8a_ d.211.1.1 (A:) Neuroge 99.9 5.1E-23 3.7E-27 178.0 14.0 150 4-157 14-197 (209)
24 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 1.7E-24 1.2E-28 170.8 3.7 107 13-124 3-109 (118)
25 d2ajaa1 a.118.24.1 (A:3-348) H 99.9 1E-24 7.4E-29 204.5 0.7 143 6-152 84-233 (346)
26 d1ycsb1 d.211.1.1 (B:327-456) 99.9 6.8E-23 5E-27 164.3 11.4 121 14-138 3-125 (130)
27 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 2.4E-22 1.7E-26 166.2 14.7 130 2-138 26-155 (156)
28 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 5.7E-22 4.1E-26 163.5 15.0 133 2-139 24-156 (156)
29 d1k1aa_ d.211.1.1 (A:) bcl-3 { 99.9 9.9E-22 7.2E-26 169.9 16.8 154 2-159 30-220 (228)
30 d1dcqa1 d.211.1.1 (A:369-522) 99.9 9.5E-22 6.9E-26 162.1 15.5 127 14-142 8-140 (154)
31 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 1.6E-22 1.1E-26 161.1 9.7 109 48-159 3-112 (125)
32 d1ycsb1 d.211.1.1 (B:327-456) 99.9 1.9E-21 1.4E-25 155.8 11.9 106 50-157 3-109 (130)
33 d2ajaa1 a.118.24.1 (A:3-348) H 99.8 3.3E-23 2.4E-27 194.1 0.8 164 2-166 116-341 (346)
34 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.8 1.8E-21 1.3E-25 178.6 10.8 136 45-184 104-298 (301)
35 d1awcb_ d.211.1.1 (B:) GA bind 99.8 3.5E-20 2.5E-24 152.1 15.9 123 8-135 30-152 (153)
36 d1wdya_ d.211.1.1 (A:) RNase L 99.8 4.8E-20 3.5E-24 166.5 15.7 136 8-147 144-284 (285)
37 d1dcqa1 d.211.1.1 (A:369-522) 99.8 2.2E-19 1.6E-23 147.7 14.4 106 51-157 9-122 (154)
38 d1ot8a_ d.211.1.1 (A:) Neuroge 99.8 8.5E-19 6.2E-23 151.0 18.4 91 43-135 118-208 (209)
No 1
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97 E-value=1.3e-30 Score=233.72 Aligned_cols=177 Identities=25% Similarity=0.213 Sum_probs=156.2
Q ss_pred CccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChH
Q 040055 6 REHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSP 85 (387)
Q Consensus 6 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tp 85 (387)
++-|++|.||||+||+.|+.+++++|++++++....+..+..|+||||+|+..|+.++++.|+++|+++ +.+|.+|+||
T Consensus 3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i-~~~d~~g~tp 81 (255)
T d1oy3d_ 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTA 81 (255)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCH
T ss_pred ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccc-cccccccchh
Confidence 456899999999999999999999999998765555667888999999999999999999999999998 7889999999
Q ss_pred HHHHHHhCcHHHHHHHHhhCCcc----------------------------------------------ccccCCCCChH
Q 040055 86 LHLASAEGHVQIVKELLLANKDA----------------------------------------------CLVADQDGRIP 119 (387)
Q Consensus 86 Lh~Aa~~g~~~~v~~Ll~~~~~~----------------------------------------------~~~~d~~g~t~ 119 (387)
||+|+..|+.++++.|++..... .+.+|.+|+||
T Consensus 82 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~Tp 161 (255)
T d1oy3d_ 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (255)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred hhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCccc
Confidence 99999999999999987543211 13467889999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccc-ccCCCcHHHHHh-------hhhhccccccccccccccccCCCcchHhH
Q 040055 120 LHLAAMRGRVEVVQELISANFDSVLV-KFHGDTVLHLCT-------TSYLLSIPQIRVDVNSLIENGFTMLQKDL 186 (387)
Q Consensus 120 Lh~A~~~g~~~iv~~Ll~~~~~~~~~-d~~G~T~Lh~A~-------~~~ll~~~~~~~~~~~~~~~G~t~l~~~~ 186 (387)
||+|++.++.+++++|++.+++.+.. +..|+||||+|+ +++|++.+ ++++.+|+.|+|||+.++
T Consensus 162 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~g---adin~~d~~g~t~L~~A~ 233 (255)
T d1oy3d_ 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG---ADPTARMYGGRTPLGSAL 233 (255)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHH
T ss_pred ccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCC---CCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999998865 678999999998 77888887 889999999999999443
No 2
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=9.3e-30 Score=224.27 Aligned_cols=174 Identities=24% Similarity=0.274 Sum_probs=160.1
Q ss_pred CCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCC
Q 040055 3 IGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLK 82 (387)
Q Consensus 3 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g 82 (387)
..++.+|.+|+||||+|+..|+.+++++|++..... ...+..+.++++.++..|+.++++.|+++++++ +.+|.+|
T Consensus 28 ~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~-~~~d~~g 103 (223)
T d1uoha_ 28 SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV---NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQV-NAVNQNG 103 (223)
T ss_dssp GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS---CCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTC
T ss_pred CcCcCcCCCCCCHHHHHHHhhhhccccccccccccc---ccccccccccccccccccccchhHHHhccCcee-EeeCCCC
Confidence 356788999999999999999999999999988755 334566899999999999999999999999998 7889999
Q ss_pred ChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh-----
Q 040055 83 HSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT----- 157 (387)
Q Consensus 83 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~----- 157 (387)
+||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|+..++.+++++|++.+.+++..|.+|+||||+|+
T Consensus 104 ~tpL~~A~~~~~~e~~~~Ll~~g~d~-~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~ 182 (223)
T d1uoha_ 104 CTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERV 182 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCH
T ss_pred CchhhHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCccchhhhhcCCcchhhhhccccceeeeccCCCCceeccccccCcH
Confidence 99999999999999999999999887 788999999999999999999999999999999999999999999998
Q ss_pred --hhhhccccccccccccccccCCCcchH
Q 040055 158 --TSYLLSIPQIRVDVNSLIENGFTMLQK 184 (387)
Q Consensus 158 --~~~ll~~~~~~~~~~~~~~~G~t~l~~ 184 (387)
+++|++.| ++++.+|++|+||+|.
T Consensus 183 ~~v~~LL~~G---ad~~~~d~~g~tpl~~ 208 (223)
T d1uoha_ 183 EEAKLLVSQG---ASIYIENKEEKTPLQV 208 (223)
T ss_dssp HHHHHHHHTT---CCSCCCCTTSCCHHHH
T ss_pred HHHHHHHHCC---CCCCCCCCCCCCHHHH
Confidence 78888887 8999999999999983
No 3
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=3.4e-28 Score=217.76 Aligned_cols=158 Identities=22% Similarity=0.225 Sum_probs=141.9
Q ss_pred CCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch----------
Q 040055 5 AREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPEL---------- 74 (387)
Q Consensus 5 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~---------- 74 (387)
++.+|.+|.||||+|+..|+.++++.|+++++++ +..|..|+||||+|+..|+.++++.|++.....
T Consensus 38 i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i---~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 114 (255)
T d1oy3d_ 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV---LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLT 114 (255)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS---SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------
T ss_pred ccCcCCCCCCccchHHhhcccccccccccccccc---cccccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhh
Confidence 6678899999999999999999999999999866 556788999999999999999999997653210
Q ss_pred ------------------------------------hhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCCh
Q 040055 75 ------------------------------------AKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRI 118 (387)
Q Consensus 75 ------------------------------------~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t 118 (387)
.+.+|.+|+||||+|+..|+.+++++|++.+.+.....+..|+|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~T 194 (255)
T d1oy3d_ 115 QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRT 194 (255)
T ss_dssp -----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred HHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccc
Confidence 13467889999999999999999999999999886677889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh-------hhhhcccc
Q 040055 119 PLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT-------TSYLLSIP 165 (387)
Q Consensus 119 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~-------~~~ll~~~ 165 (387)
|||+|++.|+.+++++|+++|++++.+|.+|+||||+|+ +++|++.|
T Consensus 195 pL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~G 248 (255)
T d1oy3d_ 195 PLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248 (255)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT
T ss_pred cccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999998 77888887
No 4
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.94 E-value=1.7e-26 Score=210.62 Aligned_cols=168 Identities=23% Similarity=0.303 Sum_probs=148.3
Q ss_pred CCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHH
Q 040055 10 EDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLA 89 (387)
Q Consensus 10 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 89 (387)
.++.|+|+.||+.|+.++|++|+++|+++ +..|.+|+||||+|+..|+.+++++|++++++. ...+..+.+|||.|
T Consensus 38 ~~~~t~l~~A~~~G~~~~v~~Ll~~Gadv---n~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~-~~~~~~~~~~L~~a 113 (291)
T d1s70b_ 38 FDDGAVFLAACSSGDTEEVLRLLERGADI---NYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAA 113 (291)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCT---TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CCCchHHHHHHHcCCHHHHHHHHHCCCCC---CccCCCCCcHHHHHHhcCCceeeeeeccccccc-cccccccccccccc
Confidence 34679999999999999999999999865 556788999999999999999999999999887 66788899999999
Q ss_pred HHhCcHHHHHHHHhhCCcc-----------------------------------------------------------cc
Q 040055 90 SAEGHVQIVKELLLANKDA-----------------------------------------------------------CL 110 (387)
Q Consensus 90 a~~g~~~~v~~Ll~~~~~~-----------------------------------------------------------~~ 110 (387)
+..|+.++++.|++.+... ..
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (291)
T d1s70b_ 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (291)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred ccccccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccc
Confidence 9999999999888764322 12
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh-------hhhhccccccccccccccccCCCcch
Q 040055 111 VADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT-------TSYLLSIPQIRVDVNSLIENGFTMLQ 183 (387)
Q Consensus 111 ~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~-------~~~ll~~~~~~~~~~~~~~~G~t~l~ 183 (387)
..+..|.||||.|+..|+.++++.|++.|++++.+|.+|+||||+|+ +++|++.| +|++.+|+.|+||||
T Consensus 194 ~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~G---adv~~~d~~G~TaL~ 270 (291)
T d1s70b_ 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL---CDMEAVNKVGQTAFD 270 (291)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCTTT
T ss_pred cccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHH
Confidence 24567899999999999999999999999999999999999999999 77889888 899999999999999
Q ss_pred H
Q 040055 184 K 184 (387)
Q Consensus 184 ~ 184 (387)
-
T Consensus 271 ~ 271 (291)
T d1s70b_ 271 V 271 (291)
T ss_dssp S
T ss_pred H
Confidence 4
No 5
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=3.9e-26 Score=200.79 Aligned_cols=167 Identities=25% Similarity=0.301 Sum_probs=150.8
Q ss_pred CchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHH
Q 040055 12 STHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASA 91 (387)
Q Consensus 12 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 91 (387)
+++.||.+|..|+.+.|+.+++.++... ..+|..|+||||+|+..|+.++++++++.+... ...+..+.++++.++.
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~--~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~ 79 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESILADKSLA--TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAAS 79 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHHHCGGGG--GCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHHhCCCcC--cCcCCCCCCHHHHHHHhhhhccccccccccccc-cccccccccccccccc
Confidence 4678999999999999999998776443 457888999999999999999999999998887 5667889999999999
Q ss_pred hCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh-------hhhhccc
Q 040055 92 EGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT-------TSYLLSI 164 (387)
Q Consensus 92 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~-------~~~ll~~ 164 (387)
.|+.+++++|++.+.++ +.+|.+|+||||+|+.+|+.+++++|+++|++++..|..|.||||+|+ .+.|.+.
T Consensus 80 ~~~~~i~~~Ll~~~~d~-~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~ 158 (223)
T d1uoha_ 80 AGRDEIVKALLGKGAQV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYY 158 (223)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccchhHHHhccCcee-EeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccc
Confidence 99999999999999887 789999999999999999999999999999999999999999999998 4556666
Q ss_pred cccccccccccccCCCcchHh
Q 040055 165 PQIRVDVNSLIENGFTMLQKD 185 (387)
Q Consensus 165 ~~~~~~~~~~~~~G~t~l~~~ 185 (387)
+ .+++.+|.+|+|||+.+
T Consensus 159 ~---~~i~~~d~~g~TpL~~A 176 (223)
T d1uoha_ 159 K---ASTNIQDTEGNTPLHLA 176 (223)
T ss_dssp T---CCSCCCCTTCCCHHHHH
T ss_pred c---ceeeeccCCCCceeccc
Confidence 5 78999999999999933
No 6
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=9.5e-26 Score=198.34 Aligned_cols=174 Identities=18% Similarity=0.171 Sum_probs=94.9
Q ss_pred CccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch-hhccCCCCCh
Q 040055 6 REHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPEL-AKELDSLKHS 84 (387)
Q Consensus 6 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~-~~~~d~~g~t 84 (387)
+.+|.+|.||||+|+..|+.+++++|+++++++......+..|.+|+|+++..+..++++.++..+... ....+..+.|
T Consensus 28 ~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (229)
T d1ixva_ 28 LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 107 (229)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCC
T ss_pred cccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 334444444444444444444444444444333222223333444444444444444444444333221 1222344455
Q ss_pred HHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcC-CCccccccCCCcHHHHHh------
Q 040055 85 PLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISAN-FDSVLVKFHGDTVLHLCT------ 157 (387)
Q Consensus 85 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~-~~~~~~d~~G~T~Lh~A~------ 157 (387)
|++.++..++.++++.|++.+... ...|.+|+||||+|+..|+.+++++|++.+ .+++.+|.+|+||||+|+
T Consensus 108 ~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~ 186 (229)
T d1ixva_ 108 CLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD 186 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred ccccccccchhhhhhhhhhhcccc-cccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHH
Confidence 555555555566666666655554 456677777777777777777777777765 455666777777777777
Q ss_pred -hhhhcc-ccccccccccccccCCCcch
Q 040055 158 -TSYLLS-IPQIRVDVNSLIENGFTMLQ 183 (387)
Q Consensus 158 -~~~ll~-~~~~~~~~~~~~~~G~t~l~ 183 (387)
+++|++ .| ++++.+|++|+|||+
T Consensus 187 ~v~~Ll~~~g---ad~~~~d~~g~t~l~ 211 (229)
T d1ixva_ 187 AAVLLVEKYG---AEYDLVDNKGAKAED 211 (229)
T ss_dssp HHHHHHHHHC---CCSCCCCTTSCCTGG
T ss_pred HHHHHHHhcC---CCCCCcCCCCCCHHH
Confidence 555664 34 667777777777776
No 7
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=3e-26 Score=201.06 Aligned_cols=166 Identities=26% Similarity=0.346 Sum_probs=137.4
Q ss_pred CCchHhHHHHHcCCHHHHHHHHh----cCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHH
Q 040055 11 DSTHKLYEASLRGSVRSLNTLMQ----NDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPL 86 (387)
Q Consensus 11 ~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpL 86 (387)
+|+||||+|+..|+.++++.|++ .+..+ +..|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~i---n~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~-~~~d~~g~t~l 76 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFL---NFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPL 76 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCC---CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCc---ccCCCCCCccccccccccccccccccccccccc-ccccccccccc
Confidence 68999999999998766665554 44433 556788999999999999999999999999988 77889999999
Q ss_pred HHHHHhCcHHHHHHHHhhCCcc-----ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCcccc-ccCCCcHHHHHh---
Q 040055 87 HLASAEGHVQIVKELLLANKDA-----CLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLV-KFHGDTVLHLCT--- 157 (387)
Q Consensus 87 h~Aa~~g~~~~v~~Ll~~~~~~-----~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~-d~~G~T~Lh~A~--- 157 (387)
|+|+..|+.++++.|++.+... .......|.||||.|+..++.+.+++|+..|...+.. +.+|+||||+|+
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g 156 (221)
T d1iknd_ 77 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 156 (221)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred ccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccc
Confidence 9999999999999988764332 2344566889999999999999999999999888877 467999999997
Q ss_pred ----hhhhccccccccccccccccCCCcch
Q 040055 158 ----TSYLLSIPQIRVDVNSLIENGFTMLQ 183 (387)
Q Consensus 158 ----~~~ll~~~~~~~~~~~~~~~G~t~l~ 183 (387)
+++|++.+ +|++.+|.+|+||++
T Consensus 157 ~~~~v~~Ll~~g---ad~~~~~~~G~tpl~ 183 (221)
T d1iknd_ 157 NPDLVSLLLKCG---ADVNRVTYQGYSPYQ 183 (221)
T ss_dssp CHHHHHHHHTTT---CCSCCCCTTCCCGGG
T ss_pred cHHHHHHHHhcC---CcccccCCCCCCHHH
Confidence 77888887 889999999999998
No 8
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.9e-25 Score=194.65 Aligned_cols=152 Identities=22% Similarity=0.169 Sum_probs=137.2
Q ss_pred CCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch-----hhc
Q 040055 3 IGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPEL-----AKE 77 (387)
Q Consensus 3 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~-----~~~ 77 (387)
.+++.+|.+|+||||+|++.|+.+++++|++.++++ ...|..|.||||.|+..|+.++++.|++.+... ...
T Consensus 30 ~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~---~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 106 (221)
T d1iknd_ 30 AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP---ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA 106 (221)
T ss_dssp CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS---CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC
T ss_pred CCcccCCCCCCccccccccccccccccccccccccc---cccccccccccccccccccccccchhhhhcccccccccccc
Confidence 468889999999999999999999999999999865 456788999999999999999999999875432 234
Q ss_pred cCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh
Q 040055 78 LDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT 157 (387)
Q Consensus 78 ~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~ 157 (387)
....|.||||.|+..|+.+++++|++.+.......+.+|+||||+|++.|+.+++++|+++|+|++.+|.+|+||||+|+
T Consensus 107 ~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~ 186 (221)
T d1iknd_ 107 TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTW 186 (221)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCT
T ss_pred cccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHH
Confidence 45678999999999999999999999998886666788999999999999999999999999999999999999999998
No 9
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.4e-25 Score=184.10 Aligned_cols=138 Identities=27% Similarity=0.412 Sum_probs=129.0
Q ss_pred hHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhC
Q 040055 14 HKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEG 93 (387)
Q Consensus 14 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 93 (387)
+|||.||..|+.++|+.|+++++++ +..|..|+||||+|+ .|+.++++.|+++++++ +.++..|.+|++.++..+
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~---n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~-~~~~~~~~~~l~~~~~~~ 77 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQNNVNV---NAQNGFGRTALQVMK-LGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAG 77 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCT---TCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCc---CccCCcccccccccc-ccccccccccccccccc-ccccccCccccccccccc
Confidence 7999999999999999999999876 556788999999886 79999999999999998 788999999999999999
Q ss_pred cHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCC-CccccccCCCcHHHHHh
Q 040055 94 HVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANF-DSVLVKFHGDTVLHLCT 157 (387)
Q Consensus 94 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~-~~~~~d~~G~T~Lh~A~ 157 (387)
+.+.++.|+..+.+. +..|..|.+|||+|+..++.+++++|+++++ +.+.+|.+|+||||+|+
T Consensus 78 ~~~~~~~l~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~ 141 (156)
T d1ihba_ 78 FLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR 141 (156)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred ccccccccccccccc-cccccccccccccccccccccccccccccccccccccCCCCCCHHHHHH
Confidence 999999999998887 7889999999999999999999999999987 78888999999999998
No 10
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.92 E-value=8.5e-26 Score=204.06 Aligned_cols=177 Identities=18% Similarity=0.184 Sum_probs=146.5
Q ss_pred CCCccC-CCCchHhHHHHHcCCHHHHHHHH--------hcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch
Q 040055 4 GAREHD-EDSTHKLYEASLRGSVRSLNTLM--------QNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPEL 74 (387)
Q Consensus 4 ~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 74 (387)
+++..| .+|.||||+||..|+.++++.|+ +.|+++ +.+|.+|+||||+|+..|+.+++++|+++|+++
T Consensus 24 ~~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadv---n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~ 100 (277)
T d2fo1e1 24 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV---NAMDCDENTPLMLAVLARRRRLVAYLMKAGADP 100 (277)
T ss_dssp TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred CCCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCc---cccCCCCCeeecccccccccccccccccccccc
Confidence 445555 45999999999999999988875 445554 556788999999999999999999999999998
Q ss_pred hhccCCCCChHHHHHHHhCcHHHHHHHHhhCC----------------------------------------------cc
Q 040055 75 AKELDSLKHSPLHLASAEGHVQIVKELLLANK----------------------------------------------DA 108 (387)
Q Consensus 75 ~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~----------------------------------------------~~ 108 (387)
+.+|.+|.||||+|...++.++++.+..... ..
T Consensus 101 -n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (277)
T d2fo1e1 101 -TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 179 (277)
T ss_dssp -CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGG
T ss_pred -ccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhccccccccccccccccccccccccccc
Confidence 7889999999999999999888876653210 00
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHH-hcCCCccccccCCCcHHHHHh-------hhhhccccccccccccccccCCC
Q 040055 109 CLVADQDGRIPLHLAAMRGRVEVVQELI-SANFDSVLVKFHGDTVLHLCT-------TSYLLSIPQIRVDVNSLIENGFT 180 (387)
Q Consensus 109 ~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll-~~~~~~~~~d~~G~T~Lh~A~-------~~~ll~~~~~~~~~~~~~~~G~t 180 (387)
.+..+..|+||||.++..++.++++.++ ..+.+.+..|..|+||||+|+ +++|++.+ ++++.+|.+|+|
T Consensus 180 ~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~g---adin~~d~~G~T 256 (277)
T d2fo1e1 180 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG---ASVEAVDATDHT 256 (277)
T ss_dssp TSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCSSSCC
T ss_pred ccccccCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCc---CCCCCcCCCCCC
Confidence 1234567899999999999999998755 567888888999999999998 77888887 899999999999
Q ss_pred cchHhHH
Q 040055 181 MLQKDLQ 187 (387)
Q Consensus 181 ~l~~~~~ 187 (387)
||+-+.+
T Consensus 257 ~L~~A~~ 263 (277)
T d2fo1e1 257 ARQLAQA 263 (277)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9995543
No 11
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=4.7e-25 Score=182.78 Aligned_cols=139 Identities=27% Similarity=0.377 Sum_probs=126.1
Q ss_pred hHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhC
Q 040055 14 HKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEG 93 (387)
Q Consensus 14 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 93 (387)
..|+.||..|+.++|+.|++.++. +.+..|..|+||||+|+ .|+.+++++|++++.++ +..+..|.+|++.++..+
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~--~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~-~~~~~~~~~~l~~~~~~~ 79 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELV--HPDALNRFGKTALQVMM-FGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCC--CTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCC--CCCccCCCCCccccccc-ccccccccccccccccc-cccccccccccccccccc
Confidence 459999999999999999987542 34557888999999987 48899999999999998 778899999999999999
Q ss_pred cHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHhh
Q 040055 94 HVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCTT 158 (387)
Q Consensus 94 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~~ 158 (387)
+.++++.+++.++++ +.+|.+|+||||+|+..|+.+++++|+ .|++++.+|.+|+||||+|+.
T Consensus 80 ~~~~~~~~l~~~~~~-n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~ 142 (156)
T d1bd8a_ 80 FLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp CHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccc-ccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHH
Confidence 999999999999887 788999999999999999999999887 589999999999999999983
No 12
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.9e-24 Score=187.33 Aligned_cols=169 Identities=22% Similarity=0.259 Sum_probs=143.3
Q ss_pred CCCchHhHHHHHcCCHHHHHHHHh----cCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChH
Q 040055 10 EDSTHKLYEASLRGSVRSLNTLMQ----NDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSP 85 (387)
Q Consensus 10 ~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tp 85 (387)
++|+||||+||+.|+.++++.|++ .+.++ +..|..|+||||+|+..|+.++++.|++++++. +..+..|.++
T Consensus 1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~i---n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~~ 76 (228)
T d1k1aa_ 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL---DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTA 76 (228)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCC---CccCCCCCccceehhcccccccccccccccccc-cccccccccc
Confidence 479999999999999999999985 55544 456788999999999999999999999999887 6677888888
Q ss_pred HHHHHHhCcHHHHHHHHhh-------------------------------------CCccccccCCCCChHHHHHHHcCC
Q 040055 86 LHLASAEGHVQIVKELLLA-------------------------------------NKDACLVADQDGRIPLHLAAMRGR 128 (387)
Q Consensus 86 Lh~Aa~~g~~~~v~~Ll~~-------------------------------------~~~~~~~~d~~g~t~Lh~A~~~g~ 128 (387)
++.|...++.++++.+... ..+.....+..|.++||.|+..+.
T Consensus 77 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~ 156 (228)
T d1k1aa_ 77 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 156 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred cccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhh
Confidence 8888888877776654432 222223455678999999999999
Q ss_pred HHHHHHHHhcCCCccccccCCCcHHHHHh-------hhhhccccccccccccccccCCCcchHh
Q 040055 129 VEVVQELISANFDSVLVKFHGDTVLHLCT-------TSYLLSIPQIRVDVNSLIENGFTMLQKD 185 (387)
Q Consensus 129 ~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~-------~~~ll~~~~~~~~~~~~~~~G~t~l~~~ 185 (387)
.++++.+++.|.+.+.+|..|+||||+|+ +++|++.| +|++.+|.+|+|||+-+
T Consensus 157 ~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~G---ad~n~~d~~G~TpL~~A 217 (228)
T d1k1aa_ 157 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG---ADSSLKNCHNDTPLMVA 217 (228)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCTTTTC
T ss_pred hhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999 77888888 89999999999999943
No 13
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.92 E-value=1.1e-24 Score=179.40 Aligned_cols=143 Identities=29% Similarity=0.341 Sum_probs=131.5
Q ss_pred CchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHH
Q 040055 12 STHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASA 91 (387)
Q Consensus 12 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 91 (387)
..||||.|++.|+.++|+.|++++++. . .|..|+||||+|+..++.++++.++...... ...+..+.++++.++.
T Consensus 2 ~~t~L~~Aa~~g~~~~v~~LL~~ga~~---~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 76 (153)
T d1awcb_ 2 LGKKLLEAARAGQDDEVRILMANGAPF---T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC---C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHHcCCCc---c-cccCCCccccccccccccccccccccccccc-cccccccccccccccc
Confidence 459999999999999999999999854 2 4778999999999999999999999888777 5667888999999999
Q ss_pred hCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHhhhh
Q 040055 92 EGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCTTSY 160 (387)
Q Consensus 92 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~~~~ 160 (387)
..+.++++.++..+.+. +.+|.+|+||||+|+..|+.+++++|++.|++++..|.+|.||||+|+.+.
T Consensus 77 ~~~~~~~~~l~~~~~~~-~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g 144 (153)
T d1awcb_ 77 EGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp HTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccceeeecccccCCcc-ccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcC
Confidence 99999999999999887 788999999999999999999999999999999999999999999998543
No 14
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.92 E-value=8.5e-25 Score=199.25 Aligned_cols=152 Identities=26% Similarity=0.321 Sum_probs=136.4
Q ss_pred CCCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchh------
Q 040055 2 EIGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELA------ 75 (387)
Q Consensus 2 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~------ 75 (387)
+++++.+|.+|.||||+|+..|+.+++++|++++.+. ...+..+.+|||.|+..|+.++++.|++++....
T Consensus 63 Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~---~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~ 139 (291)
T d1s70b_ 63 GADINYANVDGLTALHQACIDDNVDMVKFLVENGANI---NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEG 139 (291)
T ss_dssp CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccc---ccccccccccccccccccccchhhcccccCcccccccccC
Confidence 4688999999999999999999999999999998754 4456678999999999999999999998754320
Q ss_pred -----------------------------------------------------hccCCCCChHHHHHHHhCcHHHHHHHH
Q 040055 76 -----------------------------------------------------KELDSLKHSPLHLASAEGHVQIVKELL 102 (387)
Q Consensus 76 -----------------------------------------------------~~~d~~g~tpLh~Aa~~g~~~~v~~Ll 102 (387)
...+..|.||||+|+..|+.++++.|+
T Consensus 140 ~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll 219 (291)
T d1s70b_ 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219 (291)
T ss_dssp CCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred ccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccc
Confidence 223567889999999999999999999
Q ss_pred hhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh
Q 040055 103 LANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT 157 (387)
Q Consensus 103 ~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~ 157 (387)
+.++++ +.+|.+|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+
T Consensus 220 ~~g~di-n~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~ 273 (291)
T d1s70b_ 220 QARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (291)
T ss_dssp TTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred cceecc-cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 999987 789999999999999999999999999999999999999999999997
No 15
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.92 E-value=2.6e-25 Score=204.57 Aligned_cols=153 Identities=15% Similarity=0.099 Sum_probs=117.9
Q ss_pred CCCCCcc-CCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCH---HHHHHHHhcCCchhhc
Q 040055 2 EIGAREH-DEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHL---DFTKALLNHKPELAKE 77 (387)
Q Consensus 2 ~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~---~~v~~Ll~~~~~~~~~ 77 (387)
++++|.+ |++|+||||+||..|+.++|+.|+++++++ +.+|..|+||||.|+..++. +.++.+++........
T Consensus 96 ~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~---~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~ 172 (301)
T d1sw6a_ 96 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR---LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 172 (301)
T ss_dssp CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE
T ss_pred CCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhh
Confidence 3466665 899999999999999999999999999876 45678899999999987753 1222333222222356
Q ss_pred cCCCCChHHHHHHHhCc----HHH--------HHHHHhhCCcc------------------------------------c
Q 040055 78 LDSLKHSPLHLASAEGH----VQI--------VKELLLANKDA------------------------------------C 109 (387)
Q Consensus 78 ~d~~g~tpLh~Aa~~g~----~~~--------v~~Ll~~~~~~------------------------------------~ 109 (387)
.|..|+||||+++..+. ..+ +..++..+... .
T Consensus 173 ~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (301)
T d1sw6a_ 173 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANML 252 (301)
T ss_dssp ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTT
T ss_pred cccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCc
Confidence 78999999999886553 222 22333322211 3
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh
Q 040055 110 LVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT 157 (387)
Q Consensus 110 ~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~ 157 (387)
+.+|.+|+||||+|+++|+.+++++|++.|++++..|.+|+||||+|+
T Consensus 253 n~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 253 NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300 (301)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence 667999999999999999999999999999999999999999999985
No 16
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.92 E-value=1.4e-24 Score=195.87 Aligned_cols=155 Identities=25% Similarity=0.233 Sum_probs=134.8
Q ss_pred CCCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCC---------
Q 040055 2 EIGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKP--------- 72 (387)
Q Consensus 2 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~--------- 72 (387)
++++|.+|.+|.||||+|++.|+.+++++|+++|+++ +..+..|.||||+|+..++.++.+.+.....
T Consensus 64 Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~---n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~ 140 (277)
T d2fo1e1 64 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP---TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD 140 (277)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC
T ss_pred CCCccccCCCCCeeecccccccccccccccccccccc---ccccccccccccchhhhcchhhhhhhhhcccccccccccc
Confidence 4788999999999999999999999999999999865 4567789999999999999998887765410
Q ss_pred -------------------------------------chhhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCC
Q 040055 73 -------------------------------------ELAKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQD 115 (387)
Q Consensus 73 -------------------------------------~~~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 115 (387)
......+..|+||||+++..++.++++.++...+...+.+|..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~ 220 (277)
T d2fo1e1 141 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED 220 (277)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTT
T ss_pred cccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccccccCCC
Confidence 0012345678999999999999999998887766665889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHhhh
Q 040055 116 GRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCTTS 159 (387)
Q Consensus 116 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~~~ 159 (387)
|+||||+|++.|+.+++++|+++|++++.+|.+|+||||+|+..
T Consensus 221 g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~ 264 (277)
T d2fo1e1 221 GKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 264 (277)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999999999999999843
No 17
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=9.8e-24 Score=191.15 Aligned_cols=169 Identities=23% Similarity=0.243 Sum_probs=121.1
Q ss_pred CCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchh---------------
Q 040055 11 DSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELA--------------- 75 (387)
Q Consensus 11 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~--------------- 75 (387)
+++|+||.|++.|+.++|++|+++|+++... .+..|+||||+|+..|+.++++.|++.++...
T Consensus 4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~--~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~ 81 (285)
T d1wdya_ 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQ--EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCcHHHHHHHHcCCHHHHHHHHHCCCCcCcc--CCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhh
Confidence 4678888888888888888888888766332 23458888888888888888888877643220
Q ss_pred ------------------------------------------------------------hccCCCCChHHHHHHHhCcH
Q 040055 76 ------------------------------------------------------------KELDSLKHSPLHLASAEGHV 95 (387)
Q Consensus 76 ------------------------------------------------------------~~~d~~g~tpLh~Aa~~g~~ 95 (387)
...+..|.||||+|+.+|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T d1wdya_ 82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred cCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCH
Confidence 12234578889999999988
Q ss_pred HHHHHHHhhCCccccccCCCCChHHHHHHHcC----CHHHHHHHHhcCCCccccccCCCcHHHHHh-------hhhhccc
Q 040055 96 QIVKELLLANKDACLVADQDGRIPLHLAAMRG----RVEVVQELISANFDSVLVKFHGDTVLHLCT-------TSYLLSI 164 (387)
Q Consensus 96 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g----~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~-------~~~ll~~ 164 (387)
+++++|++......+..+..|.++++.+...+ ..+++++|+++|++++.+|.+|+||||.|+ ++++++.
T Consensus 162 ~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~ 241 (285)
T d1wdya_ 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 241 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS
T ss_pred HHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHc
Confidence 88888887543223666777777766654332 345777788888888888888888888887 5556653
Q ss_pred cccccccccccccCCCcch
Q 040055 165 PQIRVDVNSLIENGFTMLQ 183 (387)
Q Consensus 165 ~~~~~~~~~~~~~G~t~l~ 183 (387)
.. +++|.+|.+|.|||+
T Consensus 242 ~g--~din~~d~~G~TpL~ 258 (285)
T d1wdya_ 242 EH--IEINDTDSDGKTALL 258 (285)
T ss_dssp SS--CCTTCCCTTSCCHHH
T ss_pred CC--CCCcCCCCCCCCHHH
Confidence 21 668888888888888
No 18
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.91 E-value=2e-23 Score=183.31 Aligned_cols=170 Identities=22% Similarity=0.242 Sum_probs=147.3
Q ss_pred chHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch--hhccCCCCChHHHHHH
Q 040055 13 THKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPEL--AKELDSLKHSPLHLAS 90 (387)
Q Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~tpLh~Aa 90 (387)
++|||+||+.|+.++++.|++.++.. .+.+|.+|+||||+|+..|+.+++++|+++++++ ....+..|.+|+|+++
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 78 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSKPSL--LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 78 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCGGG--TTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CHhHHHHHHcCCHHHHHHHHHcCCCc--ccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccc
Confidence 48999999999999999999977643 3456788999999999999999999999998765 2456788999999999
Q ss_pred HhCcHHHHHHHHhhCCcc-ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh-------hhhhc
Q 040055 91 AEGHVQIVKELLLANKDA-CLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT-------TSYLL 162 (387)
Q Consensus 91 ~~g~~~~v~~Ll~~~~~~-~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~-------~~~ll 162 (387)
..+..++++.++..+... ....+..+.|+++.++..++.++++.|++.+.+.+..|.+|+||||+|+ ++.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 158 (229)
T d1ixva_ 79 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 158 (229)
T ss_dssp HHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccc
Confidence 999999999988877543 2456778999999999999999999999999999999999999999998 56677
Q ss_pred cccccccccccccccCCCcchHhH
Q 040055 163 SIPQIRVDVNSLIENGFTMLQKDL 186 (387)
Q Consensus 163 ~~~~~~~~~~~~~~~G~t~l~~~~ 186 (387)
+.+. .+++.+|.+|+||||.++
T Consensus 159 ~~~~--~~in~~d~~g~TpLh~A~ 180 (229)
T d1ixva_ 159 GLGK--SAVNWQDKQGWTPLFHAL 180 (229)
T ss_dssp TTTC--CCSCCCCTTSCCHHHHHH
T ss_pred cccc--ccccccccccCCchhhhc
Confidence 6653 458999999999999443
No 19
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1e-23 Score=200.74 Aligned_cols=163 Identities=31% Similarity=0.377 Sum_probs=145.4
Q ss_pred hHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhC
Q 040055 14 HKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEG 93 (387)
Q Consensus 14 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 93 (387)
||||+||..|+.++|++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+..|
T Consensus 2 TpL~~Aa~~g~~~~v~~Ll~~g~~i---n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi-~~~~~~g~t~L~~A~~~g 77 (408)
T d1n11a_ 2 TPLHVASFMGHLPIVKNLLQRGASP---NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIG 77 (408)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCS---CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHT
T ss_pred ChHHHHHHCcCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcC
Confidence 8999999999999999999999866 556788999999999999999999999999998 788999999999999999
Q ss_pred cHHHHHHHHhhCCcc--------------------------------ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 040055 94 HVQIVKELLLANKDA--------------------------------CLVADQDGRIPLHLAAMRGRVEVVQELISANFD 141 (387)
Q Consensus 94 ~~~~v~~Ll~~~~~~--------------------------------~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~ 141 (387)
+.++++.|+....+. ....+.++.++++.|+..++.++++.|++++.+
T Consensus 78 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~ 157 (408)
T d1n11a_ 78 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 157 (408)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999998664432 133567889999999999999999999999999
Q ss_pred ccccccCCCcHHHHHh-------hhhhccccccccccccccccCCCcch
Q 040055 142 SVLVKFHGDTVLHLCT-------TSYLLSIPQIRVDVNSLIENGFTMLQ 183 (387)
Q Consensus 142 ~~~~d~~G~T~Lh~A~-------~~~ll~~~~~~~~~~~~~~~G~t~l~ 183 (387)
++..+.+|.+|||+|+ ++.|+..+ ++++..+..|.||++
T Consensus 158 ~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~~~t~l~ 203 (408)
T d1n11a_ 158 PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG---GSPHSPAWNGYTPLH 203 (408)
T ss_dssp TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGT---CCSCCCCTTCCCHHH
T ss_pred CCcCCCcCchHHHHHHHcCCHHHHHHHHhcC---CcccccCCCCCCcch
Confidence 9999999999999998 56777776 778999999999998
No 20
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.90 E-value=7.4e-25 Score=172.93 Aligned_cols=107 Identities=25% Similarity=0.290 Sum_probs=93.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCC
Q 040055 49 ETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGR 128 (387)
Q Consensus 49 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 128 (387)
.|||++|++.|+.++++.|+++|+++ +.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+.+|+
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~-n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~di-n~~d~~g~tpLh~A~~~~~ 80 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEGH 80 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCCC-CCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTT-TCCSSSCSCHHHHHHTTTC
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhcc-cccccccccccccccccccccccccccccccee-eecccccccchhhhhhcCc
Confidence 47888888888888888888888887 677888888888888888888888888888887 7788889999999999999
Q ss_pred HHHHHHHHhcCCCccccccCCCcHHHHHh
Q 040055 129 VEVVQELISANFDSVLVKFHGDTVLHLCT 157 (387)
Q Consensus 129 ~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~ 157 (387)
.+++++|+++|++++.+|.+|+||||+|.
T Consensus 81 ~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 81 VSCVKLLLSKGADKTVKGPDGLTALEATD 109 (118)
T ss_dssp CHHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred hhhhhhhhcccccceeeCCCCCCHHHHHh
Confidence 99999999999888888889999988874
No 21
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.1e-23 Score=197.38 Aligned_cols=179 Identities=22% Similarity=0.258 Sum_probs=154.1
Q ss_pred CCCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCccccc------------------------------ccCCCCCCcH
Q 040055 2 EIGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRK------------------------------TSLTSLRETP 51 (387)
Q Consensus 2 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------------------------------~~~~~~g~tp 51 (387)
+.+++..+.+|.+|||.|+..|+.+++++|+++++++... ...+..|.||
T Consensus 155 ~~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~ 234 (408)
T d1n11a_ 155 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP 234 (408)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCCCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCH
Confidence 3567778888999999999999999999999887654211 1234557788
Q ss_pred HHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHH
Q 040055 52 LHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEV 131 (387)
Q Consensus 52 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~i 131 (387)
||+|+..++.++++.+++.+... +..|..|.||||.|+..++.+++++|++.+.+. +..+..+.||||.++..++.++
T Consensus 235 l~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~-~~~~~~~~t~L~~~~~~~~~~~ 312 (408)
T d1n11a_ 235 LHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYGNIKL 312 (408)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCSSCCCHHHHHHHSSCSHH
T ss_pred HHHHHHhCcHhHhhhhhcccccc-ccccCCCCChhhhhhhcCcHHHHHHHHHCCCcc-ccccccccccchhhcccCccee
Confidence 88888888888888888887776 677889999999999999999999999999887 7788889999999999999999
Q ss_pred HHHHHhcCCCccccccCCCcHHHHHh-------hhhhccccccccccccccccCCCcchHh
Q 040055 132 VQELISANFDSVLVKFHGDTVLHLCT-------TSYLLSIPQIRVDVNSLIENGFTMLQKD 185 (387)
Q Consensus 132 v~~Ll~~~~~~~~~d~~G~T~Lh~A~-------~~~ll~~~~~~~~~~~~~~~G~t~l~~~ 185 (387)
++.+++.|++++.+|.+|+||||+|+ +++|++.| +++|.+|++|+|||+-+
T Consensus 313 ~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~G---Ad~n~~d~~G~t~L~~A 370 (408)
T d1n11a_ 313 VKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG---ASPNEVSSDGTTPLAIA 370 (408)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCSCCCCSSSCCHHHHH
T ss_pred eeeeccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999998 78899988 89999999999999833
No 22
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.3e-24 Score=170.89 Aligned_cols=121 Identities=26% Similarity=0.328 Sum_probs=109.2
Q ss_pred CCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCC-hHHHHH
Q 040055 11 DSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKH-SPLHLA 89 (387)
Q Consensus 11 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~-tpLh~A 89 (387)
.+.++||.|++.|+.++|++|++++.++ +..+..|.||||+|+ .|+.+++++|+++|+++ +.+|..|. ||||+|
T Consensus 2 p~~~~L~~Aa~~G~~~~v~~Ll~~gad~---n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~L~~A 76 (125)
T d1bi7b_ 2 PSADWLATAAARGRVEEVRALLEAGANP---NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDA 76 (125)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCT---TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHH
T ss_pred CChhHHHHHHHCCCHHHHHHHHHcCCcc---ccccccccccccccc-ccccccccccccccccc-ccccccccccccccc
Confidence 4568999999999999999999999765 556788999999775 79999999999999998 66677665 699999
Q ss_pred HHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 040055 90 SAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELIS 137 (387)
Q Consensus 90 a~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~ 137 (387)
+..|+.+++++|++.++++ +.+|.+|+||||+|+++|+.+++++|++
T Consensus 77 ~~~g~~~~v~~Ll~~ga~~-~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 77 AREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp HHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred ccccccccccccccccccc-ccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999999887 7899999999999999999999999976
No 23
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.89 E-value=5.1e-23 Score=178.03 Aligned_cols=150 Identities=19% Similarity=0.219 Sum_probs=92.9
Q ss_pred CCCc-cCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchh-------
Q 040055 4 GARE-HDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELA------- 75 (387)
Q Consensus 4 ~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~------- 75 (387)
+++. .|.+|.||||+||+.|+.+++++|++.++.+ +..+..+.++++.++..++...............
T Consensus 14 din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~---n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (209)
T d1ot8a_ 14 ELNATMDKTGETSLHLAARFARADAAKRLLDAGADA---NSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDG 90 (209)
T ss_dssp HHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTC
T ss_pred CcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccc---ccccccccccccccccccccccccccccccccccccccccc
Confidence 4555 4789999999999999999999999998866 4456667888888887776665554444333222
Q ss_pred --------------------------hccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCH
Q 040055 76 --------------------------KELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRV 129 (387)
Q Consensus 76 --------------------------~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 129 (387)
+.++..|+||||+++..|..++++.+++.+.++ +..|.+|.||||+|+.+|+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~-~~~d~~g~TpL~~A~~~g~~ 169 (209)
T d1ot8a_ 91 TTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANR-DAQDDKDETPLFLAAREGSY 169 (209)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCH
T ss_pred cccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccc-cccccccccccchhccccHH
Confidence 334445555555555555555555555554444 44455555555555555555
Q ss_pred HHHHHHHhcCCCccccccCCCcHHHHHh
Q 040055 130 EVVQELISANFDSVLVKFHGDTVLHLCT 157 (387)
Q Consensus 130 ~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~ 157 (387)
+++++|+++|++++..|.+|+||||+|+
T Consensus 170 ~~v~~Ll~~gad~n~~d~~g~Tpl~~A~ 197 (209)
T d1ot8a_ 170 EASKALLDNFANREITDHMDRLPRDVAS 197 (209)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 5555555555555555555555555554
No 24
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.89 E-value=1.7e-24 Score=170.84 Aligned_cols=107 Identities=25% Similarity=0.300 Sum_probs=100.6
Q ss_pred chHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHh
Q 040055 13 THKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAE 92 (387)
Q Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~ 92 (387)
+|||++|++.|+.++++.|++++.++ +..+..|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.+
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~---n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~di-n~~d~~g~tpLh~A~~~ 78 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGEDV---NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYE 78 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCCC---CCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTT-TCCSSSCSCHHHHHHTT
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhcc---cccccccccccccccccccccccccccccccee-eecccccccchhhhhhc
Confidence 68999999999999999999999865 556788999999999999999999999999998 78899999999999999
Q ss_pred CcHHHHHHHHhhCCccccccCCCCChHHHHHH
Q 040055 93 GHVQIVKELLLANKDACLVADQDGRIPLHLAA 124 (387)
Q Consensus 93 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 124 (387)
|+.+++++|++.|+++ +.+|.+|+||||+|.
T Consensus 79 ~~~~~v~~Ll~~Gad~-~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 79 GHVSCVKLLLSKGADK-TVKGPDGLTALEATD 109 (118)
T ss_dssp TCCHHHHHHHTTCCCS-SSSSSSTCCCCCTCS
T ss_pred Cchhhhhhhhcccccc-eeeCCCCCCHHHHHh
Confidence 9999999999999988 789999999999984
No 25
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.88 E-value=1e-24 Score=204.47 Aligned_cols=143 Identities=17% Similarity=0.228 Sum_probs=115.9
Q ss_pred CccCCCCchHhHHHHHcCCHHHHHH---HHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhcc--CC
Q 040055 6 REHDEDSTHKLYEASLRGSVRSLNT---LMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKEL--DS 80 (387)
Q Consensus 6 ~~~d~~g~t~L~~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~--d~ 80 (387)
+.+|.+|.||||+|+++|+.++++. |++.++.+ +..|..|+||||+||+.||.+++++|+++|+++ +.. +.
T Consensus 84 ~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~i---n~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~-~~~~~~~ 159 (346)
T d2ajaa1 84 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIV---KVIQAENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQA 159 (346)
T ss_dssp HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSC---C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTT-HHHHHSH
T ss_pred HhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcc---cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc-ccccccc
Confidence 4567889999999999999877765 67888765 446777999999999999999999999999987 443 35
Q ss_pred CCChHHHHHHHhCcHHHHHHHHhhCCccc--cccCCCCChHHHHHHHcCCHHHHHHHHhcCCCccccccCCCcH
Q 040055 81 LKHSPLHLASAEGHVQIVKELLLANKDAC--LVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKFHGDTV 152 (387)
Q Consensus 81 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~--~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~ 152 (387)
+|+||||+|+.+||.++|++|++.++... +..+.+|.||+|.|+.+|+.+++++|++.|++.+..+..+.+.
T Consensus 160 ~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~ 233 (346)
T d2ajaa1 160 ENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEY 233 (346)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTT
T ss_pred CCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHc
Confidence 69999999999999999999999987542 3445667888899999999999999999988776654444333
No 26
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=6.8e-23 Score=164.34 Aligned_cols=121 Identities=21% Similarity=0.200 Sum_probs=104.9
Q ss_pred hHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhC
Q 040055 14 HKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEG 93 (387)
Q Consensus 14 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g 93 (387)
++|+.|++.|+.++|+.|++++.++ +.+|.+|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+.+|
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~---n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~-~~~d~~g~tpLh~A~~~g 78 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDP---SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCN 78 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSC---CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCc---ccccccccccccccccccccccccccccccccc-ccccccCcccccccchhh
Confidence 6799999999999999999999865 556788999999999999999999999999988 788999999999999999
Q ss_pred cHHHHHHHHhhCCccccccCCCCChHHHHH--HHcCCHHHHHHHHhc
Q 040055 94 HVQIVKELLLANKDACLVADQDGRIPLHLA--AMRGRVEVVQELISA 138 (387)
Q Consensus 94 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A--~~~g~~~iv~~Ll~~ 138 (387)
+.+++++|+++++++....+.+|+||++++ +++|+.+++++|+..
T Consensus 79 ~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~ 125 (130)
T d1ycsb1 79 NVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125 (130)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence 999999999999888433345688887765 577889999999874
No 27
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=2.4e-22 Score=166.21 Aligned_cols=130 Identities=27% Similarity=0.311 Sum_probs=117.5
Q ss_pred CCCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCC
Q 040055 2 EIGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSL 81 (387)
Q Consensus 2 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 81 (387)
+.+++.+|..|.||||.|+ .|+.+++++|++++.++ +..+..|.+|++.++..++.++++.++++++++ +.+|..
T Consensus 26 ~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~-n~~~~~ 100 (156)
T d1bd8a_ 26 LVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASP---NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGT 100 (156)
T ss_dssp CCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTT
T ss_pred CCCCCccCCCCCccccccc-ccccccccccccccccc---ccccccccccccccccccccccccccccccccc-ccccCC
Confidence 4578899999999999886 58899999999998865 445677999999999999999999999999998 778999
Q ss_pred CChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhc
Q 040055 82 KHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISA 138 (387)
Q Consensus 82 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~ 138 (387)
|+||||+|+..|+.+++++|+ .++++ +.+|.+|+||||+|++.|+.+++++|+++
T Consensus 101 ~~t~L~~A~~~~~~~i~~~L~-~~~~~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 101 GALPIHLAVQEGHTAVVSFLA-AESDL-HRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTCHHHHHHHH-TTSCT-TCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCeeecccccccccccccccc-ccccc-cccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 999999999999999999777 56666 78999999999999999999999999975
No 28
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=5.7e-22 Score=163.47 Aligned_cols=133 Identities=22% Similarity=0.254 Sum_probs=122.8
Q ss_pred CCCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCC
Q 040055 2 EIGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSL 81 (387)
Q Consensus 2 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 81 (387)
+++++.+|.+|.||||.|+ .|+.+++++|+++++++ +..+..|.+|++.++..++.++++.|++.+.+. +..|..
T Consensus 24 g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~---~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~ 98 (156)
T d1ihba_ 24 NVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANP---DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNE 98 (156)
T ss_dssp CCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred CCCcCccCCcccccccccc-ccccccccccccccccc---ccccccCcccccccccccccccccccccccccc-cccccc
Confidence 4688899999999999875 79999999999999865 456778999999999999999999999999988 788999
Q ss_pred CChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcC
Q 040055 82 KHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISAN 139 (387)
Q Consensus 82 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~ 139 (387)
|.+|+|+|+..++.++++.|+++++...+.+|.+|+||||+|++.++.+++++|+++|
T Consensus 99 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G 156 (156)
T d1ihba_ 99 GNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156 (156)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred cccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999999999998666889999999999999999999999999986
No 29
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=9.9e-22 Score=169.92 Aligned_cols=154 Identities=20% Similarity=0.174 Sum_probs=130.7
Q ss_pred CCCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhc-----------
Q 040055 2 EIGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNH----------- 70 (387)
Q Consensus 2 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~----------- 70 (387)
+++++.+|.+|.||||+|+..|+.++++.|+++++.. +..+..|.++++.|...++.++++.+...
T Consensus 30 g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~---~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (228)
T d1k1aa_ 30 GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP---MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEAR 106 (228)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCC
T ss_pred CCCCCccCCCCCccceehhcccccccccccccccccc---cccccccccccccccccccccchhhhhhcccccccccccc
Confidence 4678899999999999999999999999999998765 33455677888888887777776655443
Q ss_pred --------------------------CCchhhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHH
Q 040055 71 --------------------------KPELAKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAA 124 (387)
Q Consensus 71 --------------------------~~~~~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 124 (387)
..+.....+..|.+|||.|+..+..++++.+++.+... +.+|.+|+||||+|+
T Consensus 107 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~-~~~d~~g~t~L~~A~ 185 (228)
T d1k1aa_ 107 NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSAS 185 (228)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHH
T ss_pred ccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhcccc-ccccccCcchHHHHH
Confidence 22222344567899999999999999999999998877 788999999999999
Q ss_pred HcCCHHHHHHHHhcCCCccccccCCCcHHHHHhhh
Q 040055 125 MRGRVEVVQELISANFDSVLVKFHGDTVLHLCTTS 159 (387)
Q Consensus 125 ~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~~~ 159 (387)
.+|+.+++++|+++|++++.+|.+|+||||+|+.+
T Consensus 186 ~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~ 220 (228)
T d1k1aa_ 186 GRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 220 (228)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhC
Confidence 99999999999999999999999999999999744
No 30
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=9.5e-22 Score=162.05 Aligned_cols=127 Identities=20% Similarity=0.205 Sum_probs=111.7
Q ss_pred hHhHHHHHcCCHHHHHHHHhcCCccccc---ccCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCchhhccCCCCChHHH
Q 040055 14 HKLYEASLRGSVRSLNTLMQNDPLILRK---TSLTSLRETPLHISALL---GHLDFTKALLNHKPELAKELDSLKHSPLH 87 (387)
Q Consensus 14 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~---~~~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 87 (387)
..|+.|++.+++..+..++..+.++... ...+..|+||||+|++. |+.+++++|+++|+++ +.+|..|+||||
T Consensus 8 ~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadi-n~~d~~g~TpLh 86 (154)
T d1dcqa1 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALH 86 (154)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCCh-hhhhhhhccccc
Confidence 4567889999999999999887654322 22356799999999974 6789999999999998 889999999999
Q ss_pred HHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCc
Q 040055 88 LASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDS 142 (387)
Q Consensus 88 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 142 (387)
+|+..|+.+++++|++.++++ +.+|.+|+||||+|++.|+.+++++|++.+...
T Consensus 87 ~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~ 140 (154)
T d1dcqa1 87 YCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALSGR 140 (154)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred cccccccccccccccccCccc-cccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 999999999999999999988 889999999999999999999999999976543
No 31
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.6e-22 Score=161.08 Aligned_cols=109 Identities=21% Similarity=0.223 Sum_probs=100.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCC-hHHHHHHHc
Q 040055 48 RETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGR-IPLHLAAMR 126 (387)
Q Consensus 48 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~ 126 (387)
+.++||+|++.|+.+++++|+++|+++ +.+|.+|+||||+|+ .|+.+++++|++.++++ +.+|..|. ||||+|++.
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~-n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~L~~A~~~ 79 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAARE 79 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHHH
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCcc-ccccccccccccccc-ccccccccccccccccc-cccccccccccccccccc
Confidence 568999999999999999999999998 788999999999775 79999999999999988 66777765 699999999
Q ss_pred CCHHHHHHHHhcCCCccccccCCCcHHHHHhhh
Q 040055 127 GRVEVVQELISANFDSVLVKFHGDTVLHLCTTS 159 (387)
Q Consensus 127 g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~~~ 159 (387)
|+.+++++|+++|++++.+|.+|+||||+|+..
T Consensus 80 g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~ 112 (125)
T d1bi7b_ 80 GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL 112 (125)
T ss_dssp TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHH
T ss_pred ccccccccccccccccccccCCCCCHHHHHHHc
Confidence 999999999999999999999999999999843
No 32
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.9e-21 Score=155.82 Aligned_cols=106 Identities=26% Similarity=0.303 Sum_probs=99.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCH
Q 040055 50 TPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRV 129 (387)
Q Consensus 50 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 129 (387)
++||.|+..|+.++++.|+++|+++ +.+|.+|+||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|+.
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d~-n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~-~~~d~~g~tpLh~A~~~g~~ 80 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNV 80 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCc-ccccccccccccccccccccccccccccccccc-ccccccCcccccccchhhHH
Confidence 6799999999999999999999998 788999999999999999999999999999887 78999999999999999999
Q ss_pred HHHHHHHhcCCCccccc-cCCCcHHHHHh
Q 040055 130 EVVQELISANFDSVLVK-FHGDTVLHLCT 157 (387)
Q Consensus 130 ~iv~~Ll~~~~~~~~~d-~~G~T~Lh~A~ 157 (387)
+++++|+++|++++..+ .+|+||++++.
T Consensus 81 ~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~ 109 (130)
T d1ycsb1 81 QVCKFLVESGAAVFAMTYSDMQTAADKCE 109 (130)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHCC
T ss_pred HHHHHHHHcCCCcccccCCCCCCHHHHHH
Confidence 99999999999999876 46899988764
No 33
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.85 E-value=3.3e-23 Score=194.08 Aligned_cols=164 Identities=18% Similarity=0.135 Sum_probs=123.1
Q ss_pred CCCCCccCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchh--hccC
Q 040055 2 EIGAREHDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELA--KELD 79 (387)
Q Consensus 2 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~--~~~d 79 (387)
+++++.+|.+|.||||+||+.|+.++|++|+++++++... ..+.+|+||||+|+..||.+++++|++.+++.. +..+
T Consensus 116 ~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~-~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~ 194 (346)
T d2ajaa1 116 DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMA-MIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQA 194 (346)
T ss_dssp CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHH-HHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH
T ss_pred CCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc-ccccCCCChhHHHHHHhhHHHHHHHHHcCCccccccccc
Confidence 4678889999999999999999999999999999876332 223458999999999999999999999987652 3344
Q ss_pred CCCChHHHHHHHhCcHHHHHHHHhhCCcccc--------------------------------ccCCC------------
Q 040055 80 SLKHSPLHLASAEGHVQIVKELLLANKDACL--------------------------------VADQD------------ 115 (387)
Q Consensus 80 ~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~--------------------------------~~d~~------------ 115 (387)
.+|.||+|.|+.+|+.+++++|++.+++... ..+.+
T Consensus 195 ~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~ 274 (346)
T d2ajaa1 195 ENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECL 274 (346)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHH
T ss_pred CCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhccccc
Confidence 5678888999999999999999986543200 00111
Q ss_pred ----CChHHHHHHHcCCHHHHHHHHhcCCCccc-----cccCCCcHHHHHh-------hhhhccccc
Q 040055 116 ----GRIPLHLAAMRGRVEVVQELISANFDSVL-----VKFHGDTVLHLCT-------TSYLLSIPQ 166 (387)
Q Consensus 116 ----g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~-----~d~~G~T~Lh~A~-------~~~ll~~~~ 166 (387)
+.++|+.|+..++.+++++|++.+..... .+.+|+||||+|+ +++|++.++
T Consensus 275 ~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~p~ 341 (346)
T d2ajaa1 275 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 341 (346)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHH
T ss_pred ccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCCCC
Confidence 23567778888888999999887654332 2457889999998 556665543
No 34
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=1.8e-21 Score=178.56 Aligned_cols=136 Identities=19% Similarity=0.163 Sum_probs=106.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhCcH---HHHHHHHhhCCccccccCCCCChHHH
Q 040055 45 TSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEGHV---QIVKELLLANKDACLVADQDGRIPLH 121 (387)
Q Consensus 45 ~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~---~~v~~Ll~~~~~~~~~~d~~g~t~Lh 121 (387)
|..|+||||+||..|+.++++.|+++|+++ +.+|..|+||||.|+..++. +.++.+++........+|..|+||||
T Consensus 104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~g~t~lh 182 (301)
T d1sw6a_ 104 DEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH 182 (301)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccccCCHHH
Confidence 788999999999999999999999999998 78899999999999987752 22223333222233567899999999
Q ss_pred HHHHcCC----HH--------HHHHHHhcCCC-------------------------------------ccccccCCCcH
Q 040055 122 LAAMRGR----VE--------VVQELISANFD-------------------------------------SVLVKFHGDTV 152 (387)
Q Consensus 122 ~A~~~g~----~~--------iv~~Ll~~~~~-------------------------------------~~~~d~~G~T~ 152 (387)
.++..+. .. +++.+++.+.. ++.+|.+|+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~Tp 262 (301)
T d1sw6a_ 183 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC 262 (301)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCH
T ss_pred HHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCH
Confidence 8886443 22 23334433222 46679999999
Q ss_pred HHHHh-------hhhhccccccccccccccccCCCcchH
Q 040055 153 LHLCT-------TSYLLSIPQIRVDVNSLIENGFTMLQK 184 (387)
Q Consensus 153 Lh~A~-------~~~ll~~~~~~~~~~~~~~~G~t~l~~ 184 (387)
||+|+ +++|++.+ ++++.+|+.|+||||-
T Consensus 263 Lh~A~~~g~~~iv~~Ll~~G---Ad~~~~n~~G~Tpl~~ 298 (301)
T d1sw6a_ 263 LNIAARLGNISIVDALLDYG---ADPFIANKSGLRPVDF 298 (301)
T ss_dssp HHHHHHHCCHHHHHHHHHTT---CCTTCCCTTSCCGGGG
T ss_pred HHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHH
Confidence 99999 88899888 9999999999999984
No 35
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=3.5e-20 Score=152.05 Aligned_cols=123 Identities=24% Similarity=0.323 Sum_probs=113.4
Q ss_pred cCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHH
Q 040055 8 HDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLH 87 (387)
Q Consensus 8 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 87 (387)
.|..|.||||+|+..++.++++.++...... ...+..+.++++.++...+.++++.+.+++.+. ..+|.+|+||||
T Consensus 30 ~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~T~L~ 105 (153)
T d1awcb_ 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR---DARTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALH 105 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHH
T ss_pred cccCCCccccccccccccccccccccccccc---cccccccccccccccccccceeeecccccCCcc-ccccccCchHHH
Confidence 6889999999999999999999999887654 334566889999999999999999999999988 788999999999
Q ss_pred HHHHhCcHHHHHHHHhhCCccccccCCCCChHHHHHHHcCCHHHHHHH
Q 040055 88 LASAEGHVQIVKELLLANKDACLVADQDGRIPLHLAAMRGRVEVVQEL 135 (387)
Q Consensus 88 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~L 135 (387)
+|+..|+.+++++|++.++++ +.+|.+|+||||+|+.+|+.+++++|
T Consensus 106 ~A~~~g~~~iv~~ll~~gad~-~~~d~~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 106 WATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hhhhcchhheeeeccccccCC-cccCCCCCCHHHHHHHcCCHHHHHhC
Confidence 999999999999999999988 78999999999999999999999876
No 36
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.8e-20 Score=166.48 Aligned_cols=136 Identities=20% Similarity=0.227 Sum_probs=116.8
Q ss_pred cCCCCchHhHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcC----CHHHHHHHHhcCCchhhccCCCCC
Q 040055 8 HDEDSTHKLYEASLRGSVRSLNTLMQNDPLILRKTSLTSLRETPLHISALLG----HLDFTKALLNHKPELAKELDSLKH 83 (387)
Q Consensus 8 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g----~~~~v~~Ll~~~~~~~~~~d~~g~ 83 (387)
.+..|.||||.|++.|+.+++++|+++.. .+.+..+..|.++++.+...+ ..++++.|+++|+++ +.+|..|.
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~-n~~~~~g~ 220 (285)
T d1wdya_ 144 LRKGGATALMDAAEKGHVEVLKILLDEMG--ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGK 220 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSC--CCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTTSC
T ss_pred hcccCchHHHHHHHcCCHHHHHHHHhccC--CCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCC-CccCCCCC
Confidence 45669999999999999999999998643 123556777888887765543 447899999999998 77899999
Q ss_pred hHHHHHHHhCcHHHHHHHHhh-CCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q 040055 84 SPLHLASAEGHVQIVKELLLA-NKDACLVADQDGRIPLHLAAMRGRVEVVQELISANFDSVLVKF 147 (387)
Q Consensus 84 tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~d~ 147 (387)
||||+|+..|+.+++++|++. +.++ +.+|.+|+||||+|++.|+.+++++|+++|++++..|.
T Consensus 221 t~L~~a~~~~~~~~v~~lL~~~g~di-n~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~ 284 (285)
T d1wdya_ 221 TPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHSSSCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred CccchhhhcCcHHHHHHHHHcCCCCC-cCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence 999999999999999999986 4455 88999999999999999999999999999999998763
No 37
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=2.2e-19 Score=147.74 Aligned_cols=106 Identities=16% Similarity=0.166 Sum_probs=95.0
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCchhh-----ccCCCCChHHHHHHHh---CcHHHHHHHHhhCCccccccCCCCChHHHH
Q 040055 51 PLHISALLGHLDFTKALLNHKPELAK-----ELDSLKHSPLHLASAE---GHVQIVKELLLANKDACLVADQDGRIPLHL 122 (387)
Q Consensus 51 pLh~Aa~~g~~~~v~~Ll~~~~~~~~-----~~d~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 122 (387)
.|+.|++.++...+..++..+.++.. ..+..|+||||+|++. |+.+++++|++.++++ +.+|.+|+||||+
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadi-n~~d~~g~TpLh~ 87 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHY 87 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCCh-hhhhhhhcccccc
Confidence 45688899999999999988876532 2267899999999985 6789999999999987 8899999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCccccccCCCcHHHHHh
Q 040055 123 AAMRGRVEVVQELISANFDSVLVKFHGDTVLHLCT 157 (387)
Q Consensus 123 A~~~g~~~iv~~Ll~~~~~~~~~d~~G~T~Lh~A~ 157 (387)
|+..|+.+++++|+++|++++..|.+|+||||+|+
T Consensus 88 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 122 (154)
T d1dcqa1 88 CCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122 (154)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccccccccccccccccCccccccCCCCCCHHHHHH
Confidence 99999999999999999999999999999999998
No 38
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.80 E-value=8.5e-19 Score=151.02 Aligned_cols=91 Identities=26% Similarity=0.346 Sum_probs=85.9
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhhccCCCCChHHHHHHHhCcHHHHHHHHhhCCccccccCCCCChHHHH
Q 040055 43 SLTSLRETPLHISALLGHLDFTKALLNHKPELAKELDSLKHSPLHLASAEGHVQIVKELLLANKDACLVADQDGRIPLHL 122 (387)
Q Consensus 43 ~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 122 (387)
..+..|+||||.++..|+.++++.+++.+.++ +..|..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+
T Consensus 118 ~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~-~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~-n~~d~~g~Tpl~~ 195 (209)
T d1ot8a_ 118 AADNSGKTALHWAAAVNNTEAVNILLMHHANR-DAQDDKDETPLFLAAREGSYEASKALLDNFANR-EITDHMDRLPRDV 195 (209)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred ccCCCCCCcchhhcccCcceeeeeeccccccc-cccccccccccchhccccHHHHHHHHHHCCCCC-CCcCCCCCCHHHH
Confidence 45677999999999999999999999999998 788999999999999999999999999999987 7899999999999
Q ss_pred HHHcCCHHHHHHH
Q 040055 123 AAMRGRVEVVQEL 135 (387)
Q Consensus 123 A~~~g~~~iv~~L 135 (387)
|+++|+.++|++|
T Consensus 196 A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 196 ASERLHHDIVRLL 208 (209)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHcCCHHHHhhc
Confidence 9999999999976
Done!