BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040058
(326 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00IB6|CPL4_ARATH RNA polymerase II C-terminal domain phosphatase-like 4
OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1
Length = 440
Score = 201 bits (510), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 189/361 (52%), Gaps = 64/361 (17%)
Query: 27 CAHTTVRDSRCIFCSQAMNDSFGLSFDYMLRGLRYSE--------------QEERKLQLV 72
C H + C C Q + ++ G+SF Y+ + +R +E Q +RKL LV
Sbjct: 68 CEHPGSFGNMCFVCGQKLEET-GVSFRYIHKEMRLNEDEISRLRDSDSRFLQRQRKLYLV 126
Query: 73 LNLDHTLLHCRNIKSLSSGEKYLKKQIHSFI-------GSLFQMA-NDKLVKLRPFVRTF 124
L+LDHTLL+ ++ L E+YLK HS GSLF + + KLRPFV +F
Sbjct: 127 LDLDHTLLNTTILRDLKPEEEYLKSHTHSLQDGCNVSGGSLFLLEFMQMMTKLRPFVHSF 186
Query: 125 LEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVRGQE 184
L++AS + +Y+ TM R YA KLLD +YF R+I+R+D + K+ D+V GQE
Sbjct: 187 LKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVISRDDGTVRHEKSLDVVLGQE 246
Query: 185 RGIVILDDTESVWSDHTENLIVLGKYVYFRDKELNGDH--KSYSETLTDESENEEALANV 242
++ILDDTE+ W H +NLIV+ +Y +F DH KS SE +DESE + ALA V
Sbjct: 247 SAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRYKSLSELKSDESEPDGALATV 306
Query: 243 LRVLKTIHRLFFDSV-----CGDVRTYLPKVRSEFSRDV-LYFSAIFRD-------CLWA 289
L+VLK H LFF++V DVR L +VR E + + FS +F LW
Sbjct: 307 LKVLKQAHALFFENVDEGISNRDVRLMLKQVRKEILKGCKIVFSRVFPTKAKPEDHPLWK 366
Query: 290 EQEE--------------------------KFLVQEKKFLVHPRWIDAYYFLWRRRPEDD 323
EE ++ V+EKK++VH WIDA +LW ++PE++
Sbjct: 367 MAEELGATCATEVDASVTHVVAMDVGTEKARWAVREKKYVVHRGWIDAANYLWMKQPEEN 426
Query: 324 Y 324
+
Sbjct: 427 F 427
>sp|Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis
thaliana GN=CPL3 PE=1 SV=2
Length = 1241
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 141/314 (44%), Gaps = 58/314 (18%)
Query: 67 RKLQLVLNLDHTLLHCRNIKSLSS-GEKYLKKQIHS----FIGSLFQMANDKL-VKLRPF 120
+KL LVL++DHTLL+ + S E+ L+K+ LF+ + + KLRP
Sbjct: 926 QKLSLVLDIDHTLLNSAKFNEVESRHEEILRKKEEQDREKPYRHLFRFLHMGMWTKLRPG 985
Query: 121 VRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDR------ 174
+ FLE+AS L +++L TM + YA KLLD F+ R+I++ D
Sbjct: 986 IWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPKGVLFNGRVISKGDDGDPLDGDERVP 1045
Query: 175 KNPDL--VRGQERGIVILDDTESVWSDHTENLIVLGKYVYF----RDKELNGDHKSYSET 228
K+ DL V G E +VI+DD+ VW H NLI + +Y+YF R L G S E
Sbjct: 1046 KSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLIAVERYLYFPCSRRQFGLLG--PSLLEL 1103
Query: 229 LTDESENEEALANVLRVLKTIHRLFF-----------DSVCGDVRTYLPKVRSEFSRDVL 277
DE E LA+ L V++ IH+ FF + + + R L R FSR +
Sbjct: 1104 DRDEVPEEGTLASSLAVIEKIHQNFFSHTSLDEVDVRNILASEQRKILAGCRIVFSRIIP 1163
Query: 278 YFSA-IFRDCLWAEQEE--------------------------KFLVQEKKFLVHPRWID 310
A LW E+ + + +F+VHP W++
Sbjct: 1164 VGEAKPHLHPLWQTAEQFGAVCTTQVDEHVTHVVTNSLGTDKVNWALTRGRFVVHPGWVE 1223
Query: 311 AYYFLWRRRPEDDY 324
A FL++R E+ Y
Sbjct: 1224 ASAFLYQRANENLY 1237
>sp|Q8SV03|FCP1_ENCCU RNA polymerase II subunit A C-terminal domain phosphatase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=FCP1 PE=1
SV=1
Length = 411
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 68 KLQLVLNLDHTLLHCR-NIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLE 126
KL LVL+LD T+LH SL K++ + VKLRP + L
Sbjct: 60 KLILVLDLDQTVLHTTYGTSSLEGTVKFVIDRCRY------------CVKLRPNLDYMLR 107
Query: 127 QASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKN-PDLVRGQER 185
+ S L +I++ TM TR YAE V+++D KYF RII R++ G K L R
Sbjct: 108 RISKLYEIHVYTMGTRAYAERIVEIIDPSGKYFDDRIITRDENQGVLVKRLSRLFPHDHR 167
Query: 186 GIVILDDTESVWSDHTENLIVLGKYVYFRDKELN 219
IVILDD VW D+ ENL+++ + YF ++N
Sbjct: 168 NIVILDDRPDVW-DYCENLVLIRPFWYFNRVDIN 200
>sp|Q03254|FCP1_YEAST RNA polymerase II subunit A C-terminal domain phosphatase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=FCP1 PE=1 SV=1
Length = 732
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 45/237 (18%)
Query: 21 CEQSLSCAHTTVRDSRCIFCSQAMN-DSF-GLSFDYMLR-GLRYSEQE------------ 65
CE C H V C C + ++ D+F G+ D + L+ SE E
Sbjct: 110 CEIKRPCNHDIVYGGLCTQCGKEVSADAFDGVPLDVVGDVDLQISETEAIRTGKALKEHL 169
Query: 66 --ERKLQLVLNLDHTLLHC---------------------RNIKSLSSGEKYLKKQIH-S 101
++KL LV++LD T++HC R++KS + E+ + ++ +
Sbjct: 170 RRDKKLILVVDLDQTIIHCGVDPTIAEWKNDPNNPNFETLRDVKSFTLDEELVLPLMYMN 229
Query: 102 FIGSLFQMANDK----LVKLRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSK 157
GS+ + + VK+RP ++ F + + L ++++ TM+TR YA K++D +
Sbjct: 230 DDGSMLRPPPVRKCWYYVKVRPGLKEFFAKVAPLFEMHIYTMATRAYALQIAKIVDPTGE 289
Query: 158 YFSSRIIAREDFNGKDRKN-PDLVRGQERGIVILDDTESVWSDHTENLIVLGKYVYF 213
F RI++R++ K+ L + +V++DD VW+ NLI + Y +F
Sbjct: 290 LFGDRILSRDENGSLTTKSLAKLFPTDQSMVVVIDDRGDVWN-WCPNLIKVVPYNFF 345
>sp|Q9Y5B0|CTDP1_HUMAN RNA polymerase II subunit A C-terminal domain phosphatase OS=Homo
sapiens GN=CTDP1 PE=1 SV=3
Length = 961
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 67 RKLQLVLNLDHTLLHC--RNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTF 124
RKL L+++LD TL+H ++ + +S+ K H +G M + +LRP + F
Sbjct: 181 RKLVLMVDLDQTLIHTTEQHCQQMSN-----KGIFHFQLGRGEPMLH---TRLRPHCKDF 232
Query: 125 LEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIARE---DFNGKDRKNPDLVR 181
LE+ + L ++++ T +R YA LD + K FS RI++R+ D K +L
Sbjct: 233 LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFP 292
Query: 182 GQERGIVILDDTESVWSDHTENLIVLGKYVYFR 214
+ + I+DD E VW NLI + KYVYF+
Sbjct: 293 CGDSMVCIIDDREDVWK-FAPNLITVKKYVYFQ 324
>sp|Q7TSG2|CTDP1_MOUSE RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus
musculus GN=Ctdp1 PE=1 SV=1
Length = 960
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 67 RKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLE 126
RKL L+++LD TL+H K + H +G M + +LRP + FLE
Sbjct: 181 RKLVLMVDLDQTLIHTTEQHCPQMSNKGI---FHFQLGRGEPMLH---TRLRPHCKDFLE 234
Query: 127 QASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIARE---DFNGKDRKNPDLVRGQ 183
+ + L ++++ T +R YA LD + K FS RI++R+ D K +L
Sbjct: 235 KIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCG 294
Query: 184 ERGIVILDDTESVWSDHTENLIVLGKYVYF 213
+ + I+DD E VW NLI + KYVYF
Sbjct: 295 DSMVCIIDDREDVWK-FAPNLITVKKYVYF 323
>sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal domain phosphatase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fcp1 PE=1 SV=1
Length = 723
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 35/172 (20%)
Query: 64 QEERKLQLVLNLDHTLLHC---------------------RNIKSLSSGEKYLKKQIHSF 102
++E++L L+++LD T++H R+++S + L++ +
Sbjct: 160 RQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFN-----LQEGPSGY 214
Query: 103 IGSLFQMANDKLVKLRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSR 162
+ +K RP + FL++ S L ++++ TM T+ YA+ K++D K F R
Sbjct: 215 TSCYY-------IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDR 267
Query: 163 IIAREDFNGKDRKN-PDLVRGQERGIVILDDTESVWSDHTENLIVLGKYVYF 213
+++R+D +K+ L +V++DD VW D NLI + Y +F
Sbjct: 268 VLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDVW-DWNPNLIKVVPYEFF 318
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+ S
Sbjct: 290 LVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLERMSQ 341
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
+ +I L T S + YA+ + +LD + R+
Sbjct: 342 MYEIILFTASKKVYADKLLNILDPKKQLVRHRL 374
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+ S
Sbjct: 289 LVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLERMSQ 340
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
+ +I L T S + YA+ + +LD + R+
Sbjct: 341 MYEIILFTASKKVYADKLLNILDPKKQLVRHRL 373
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 68 KLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQ 127
+ LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+
Sbjct: 287 EFSLVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLER 338
Query: 128 ASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
S + +I L T S + YA+ + +LD + R+
Sbjct: 339 MSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRL 374
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+ S
Sbjct: 289 LVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLERMSQ 340
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
+ +I L T S + YA+ + +LD + R+
Sbjct: 341 MYEIILFTASKKVYADKLLNILDPKKQLVRHRL 373
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 68 KLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQ 127
+ LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+
Sbjct: 287 EFSLVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLER 338
Query: 128 ASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
S + +I L T S + YA+ + +LD + R+
Sbjct: 339 MSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRL 374
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 68 KLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQ 127
+ LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+
Sbjct: 287 EFSLVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLER 338
Query: 128 ASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
S + +I L T S + YA+ + +LD + R+
Sbjct: 339 MSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRL 374
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+ S
Sbjct: 290 LVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLERMSQ 341
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
+ +I L T S + YA+ + +LD + R+
Sbjct: 342 IYEIILFTASKKVYADKLLNILDPKKQLVRHRL 374
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 68 KLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQ 127
+ LVL+LD TL+HC SL+ E F ++Q+ V+LRPF R FLE+
Sbjct: 290 EFSLVLDLDETLVHC----SLNELEDAALTFPVLFQDVIYQV----YVRLRPFFREFLER 341
Query: 128 ASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIARED---FNGKDRKNPDLVRGQE 184
S + +I L T S + YA+ + +LD + R+ RE G K+ +++
Sbjct: 342 MSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLF-REHCVCVQGNYIKDLNILGRDL 400
Query: 185 RGIVILDDTESVWSDHTENLIV------------LGKYVYFRDK--ELNGDHKSY 225
VI+D++ ++ N I L K V F +K ELN D + Y
Sbjct: 401 SKTVIIDNSPQAFAYQLSNGIPIESWFVDKNDNELLKLVPFLEKLVELNEDVRPY 455
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 68 KLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQ 127
+ LVL+LD TL+HC ++ L I ++ V+LRPF R FLE+
Sbjct: 281 EFSLVLDLDETLVHC-SLNELDDAALTFPVLFQDVIYQVY-------VRLRPFFREFLER 332
Query: 128 ASSLVDIYLCTMSTRCYAEAAVKLLD 153
S + +I L T S + YA+ + +LD
Sbjct: 333 MSQIYEIILFTASKKVYADKLLNILD 358
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 58 GLRYSEQEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKL-VK 116
L E K+ LVL+LD TL+HC S E +Q H F ++ K
Sbjct: 380 ALPPKEHSSPKISLVLDLDETLVHC-------STEPL--EQPHLTFPVFFNNTEYQVFAK 430
Query: 117 LRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSK 157
RPF FL + S + ++ + T S YA + ++D ++K
Sbjct: 431 KRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK 471
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 62 SEQEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFV 121
+EQ++ ++ +V++LD TL+H + K +++ + + +I G+ Q+ V RP+V
Sbjct: 94 TEQDQGRICVVIDLDETLVH-SSFKPINNADFIVPVEIE---GTTHQV----YVLKRPYV 145
Query: 122 RTFLEQASSLVDIYLCTMSTRCYAEAAVKLLD----LDSKYFSSRIIAREDFNGKD--RK 175
FL + L + L T S YA+ LLD ++ F + + KD R
Sbjct: 146 DEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVFHQGCYVKDLSRL 205
Query: 176 NPDLVRGQERGIVILDDTESVWSDHTENLI 205
DL R VILD++ + + H EN +
Sbjct: 206 GRDL-----RKTVILDNSPASYIFHPENAV 230
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
LVL+LD TL+HC ++ L + + ++ V+LRP +RTFL + +
Sbjct: 67 LVLDLDETLVHC-SLTPLDNATMVFPVVFQNITYQVY-------VRLRPHLRTFLSRMAK 118
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRI 163
+I + T S + YA +LD + R+
Sbjct: 119 TFEIIIFTASKKVYANKLCDILDPRKNHIRHRL 151
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
L+L+LD TL+H + K L S + L +I + +++ V RP V FLE+
Sbjct: 260 LILDLDETLVHS-SFKYLRSADFVLSVEIDDQVHNVY-------VIKRPGVEEFLERVGK 311
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIARE---DFNGKDRKNPDLVRGQERGI 187
L ++ + T S Y + + +LD D K R+ RE ++ G KN + I
Sbjct: 312 LFEVVVFTASVSRYGDPLLDILDTD-KVIHHRLF-REACYNYEGNYIKNLSQIGRPLSDI 369
Query: 188 VILDDTESVWSDHTENLIVLGKY 210
+ILD++ + + H ++ I + +
Sbjct: 370 IILDNSPASYIFHPQHAIPISSW 392
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 64 QEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRT 123
Q+ K+ +V++LD TL+H + K +++ + + +I + ++ + RP V
Sbjct: 86 QDSDKICVVIDLDETLVHS-SFKPVNNADFIIPVEIDGVVHQVYVLK-------RPHVDE 137
Query: 124 FLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVR-G 182
FL++ L + L T S YA+ LLD F +R+ + DL R G
Sbjct: 138 FLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLG 196
Query: 183 QE-RGIVILDDTESVWSDHTENLIVLGKY 210
++ R ++ILD++ + + H +N + + +
Sbjct: 197 RDLRRVLILDNSPASYVFHPDNAVPVASW 225
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 64 QEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRT 123
Q+ K+ +V++LD TL+H + K +++ + + +I + ++ + RP V
Sbjct: 86 QDSDKICVVIDLDETLVHS-SFKPVNNADFIIPVEIDGVVHQVYVLK-------RPHVDE 137
Query: 124 FLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVR-G 182
FL++ L + L T S YA+ LLD F +R+ + DL R G
Sbjct: 138 FLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLG 196
Query: 183 QE-RGIVILDDTESVWSDHTENLIVLGKY 210
++ R ++ILD++ + + H +N + + +
Sbjct: 197 RDLRRVLILDNSPASYVFHPDNAVPVASW 225
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
LVL+LD TL+H + K + + + + +I I ++ V RPFV FL +
Sbjct: 139 LVLDLDETLVHS-SFKPVHNPDFIVPVEIEGTIHQVY-------VVKRPFVDDFLRAIAE 190
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVR-GQE-RGIV 188
+I + T S YA+ + LD + R+ N K DL R G++ + +
Sbjct: 191 KFEIVVFTASLAKYADPVLDFLDT-GRVIHYRLFRESCHNHKGNYVKDLSRLGRDLKSTI 249
Query: 189 ILDDTESVWSDHTENLIVLGKY 210
I+D++ S + H EN I + +
Sbjct: 250 IVDNSPSSYLFHPENAIPIDSW 271
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 62 SEQEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFV 121
+E+++ ++ +V++LD TL+H + K +++ + + +I G+ Q+ V RP+V
Sbjct: 95 TEEDQGRICVVIDLDETLVH-SSFKPINNADFIVPIEIE---GTTHQV----YVLKRPYV 146
Query: 122 RTFLEQASSLVDIYLCTMSTRCYAEAAVKLLD----LDSKYFSSRIIAREDFNGKD--RK 175
FL + L + L T S YA+ LLD ++ F + + KD R
Sbjct: 147 DEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVFHQGCYVKDLSRL 206
Query: 176 NPDLVRGQERGIVILDDTESVWSDHTENLI 205
DL R +ILD++ + + H EN +
Sbjct: 207 GRDL-----RKTLILDNSPASYIFHPENAV 231
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 19/158 (12%)
Query: 63 EQEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGS--LFQMANDK-----LV 115
Q +RK+ LVL+LD TL+H S + L+ + + ++ DK V
Sbjct: 57 SQVKRKI-LVLDLDETLIH-------SHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFV 108
Query: 116 KLRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFN---GK 172
RP V FLE S ++ + T S Y A LD +S+ R R+ G
Sbjct: 109 HKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NSRSILKRRYYRQHCTLELGS 167
Query: 173 DRKNPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
K+ +V IVILD++ + H +N I + +
Sbjct: 168 YIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 38.5 bits (88), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 64 QEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGS--LFQMANDK-----LVK 116
Q +RK+ LVL+LD TL+H S + L+ + + ++ DK V
Sbjct: 58 QVKRKI-LVLDLDETLIH-------SHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVH 109
Query: 117 LRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFN---GKD 173
RP V FLE S ++ + T S Y A LD +S+ R R+ G
Sbjct: 110 KRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NSRSILKRRYYRQHCTLELGSY 168
Query: 174 RKNPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
K+ +V IVILD++ + H +N I + +
Sbjct: 169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 64 QEERKLQLVLNLDHTLLHCRN-------IKSLSSGEKYLKKQIHSFIGSLFQMANDKLVK 116
Q +RK+ LVL+LD TL+H + ++ + + LK I F V
Sbjct: 58 QVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFF-------VH 109
Query: 117 LRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFN---GKD 173
RP V FLE S ++ + T S Y A LD +S+ R R+ G
Sbjct: 110 KRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NSRSILKRRYYRQHCTLELGSY 168
Query: 174 RKNPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
K+ +V IVILD++ + H +N I + +
Sbjct: 169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 64 QEERKLQLVLNLDHTLLHCRN-------IKSLSSGEKYLKKQIHSFIGSLFQMANDKLVK 116
Q +RK+ LVL+LD TL+H + ++ + + LK I F V
Sbjct: 58 QVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFF-------VH 109
Query: 117 LRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFN---GKD 173
RP V FLE S ++ + T S Y A LD +S+ R R+ G
Sbjct: 110 KRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NSRSILKRRYYRQHCTLELGSY 168
Query: 174 RKNPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
K+ +V IVILD++ + H +N I + +
Sbjct: 169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 38.5 bits (88), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
LVL+LD TL+H + S ++ + ++ + L+ + RP + FL S
Sbjct: 306 LVLDLDETLIHSVSRGSRTTSGQPIEVHVPGEHPILY------YIHKRPHLDYFLSNVSQ 359
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIARE--DFNGKDRKNPDLVRGQERGIV 188
+ L T S + YA+ + L+ D K F+ R + + K+ + I+
Sbjct: 360 WFRLILFTASVQPYADPIIDYLERDKKIFAKRYYRQHCALVDSSFVKDISICNIHLSRIM 419
Query: 189 ILDDTESVWSDHTENLIVLGKYV 211
I+D++ + ++ H EN I + ++
Sbjct: 420 IIDNSPASYNAHKENAIPIEGWI 442
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
+V++LD TL+H + K +S+ + + +I I ++ + RP V FL++
Sbjct: 109 VVIDLDETLVHS-SFKPISNADFIVPVEIDGTIHQVYVLK-------RPHVDEFLQRMGQ 160
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVR-GQERG-IV 188
L + L T S YA+ LLD F +R+ + DL R G+E ++
Sbjct: 161 LFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVI 219
Query: 189 ILDDTESVWSDHTENLI 205
I+D++ + + H EN +
Sbjct: 220 IVDNSPASYIFHPENAV 236
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
+V++LD TL+H + K +S+ + + +I I ++ + RP V FL++
Sbjct: 108 VVIDLDETLVH-SSFKPISNADFIVPVEIDGTIHQVYVLK-------RPHVDEFLQRMGE 159
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVR-GQERG-IV 188
L + L T S YA+ LLD F +R+ + DL R G+E ++
Sbjct: 160 LFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVI 218
Query: 189 ILDDTESVWSDHTENLIVLGKY 210
I+D++ + + H EN + + +
Sbjct: 219 IVDNSPASYIFHPENAVPVQSW 240
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 71 LVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
+V++LD TL+H + K +S+ + + +I I ++ + RP V FL++
Sbjct: 109 VVIDLDETLVHS-SFKPISNADFIVPVEIDGTIHQVYVLK-------RPHVDEFLQRMGQ 160
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVR-GQERG-IV 188
L + L T S YA+ LLD F +R+ + DL R G+E ++
Sbjct: 161 LFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVI 219
Query: 189 ILDDTESVWSDHTENLI 205
I+D++ + + H EN +
Sbjct: 220 IVDNSPASYIFHPENAV 236
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 29/163 (17%)
Query: 63 EQEERKLQLVLNLDHTLLHCRN-------IKSLSSGEKYLKKQIHSFIGSLFQMANDKLV 115
Q +RK+ LVL+LD TL+H + ++ + + LK I F V
Sbjct: 57 SQVKRKV-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFF-------V 108
Query: 116 KLRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFN----- 170
RP V FLE S ++ + T S Y A LD ++R + R F
Sbjct: 109 HKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD------NNRGVLRRRFYRQHCT 162
Query: 171 ---GKDRKNPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
G K+ +V +VILD++ + H +N I + +
Sbjct: 163 LELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 19/158 (12%)
Query: 63 EQEERKLQLVLNLDHTLLHCRN-------IKSLSSGEKYLKKQIHSFIGSLFQMANDKLV 115
Q +RK+ LVL+LD TL+H + ++ + + LK I F V
Sbjct: 57 SQVKRKV-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFF-------V 108
Query: 116 KLRPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFN---GK 172
RP V FLE S ++ + T S Y A LD ++K R R+ G
Sbjct: 109 HKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NNKGVLRRRFYRQHCTLELGS 167
Query: 173 DRKNPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
K+ +V +VILD++ + H +N I + +
Sbjct: 168 YIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 66 ERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGS--LFQMANDK-----LVKLR 118
+RK+ LVL+LD TL+H S + L+ + + ++ DK V R
Sbjct: 61 KRKI-LVLDLDETLIH-------SHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKR 112
Query: 119 PFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDF---NGKDRK 175
P V FLE S ++ + T S Y A LD ++K R R+ +G K
Sbjct: 113 PHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NNKAILKRRYYRQHCTLDSGSYIK 171
Query: 176 NPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
+ +V +VILD++ + H +N I + +
Sbjct: 172 DLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSW 206
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 19/155 (12%)
Query: 66 ERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGS--LFQMANDK-----LVKLR 118
+RK+ LVL+LD TL+H S + L+ + + ++ DK V R
Sbjct: 61 KRKI-LVLDLDETLIH-------SHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKR 112
Query: 119 PFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIARE---DFNGKDRK 175
P V FLE S ++ + T S Y A LD + R + D G K
Sbjct: 113 PHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQHCTLDL-GSYIK 171
Query: 176 NPDLVRGQERGIVILDDTESVWSDHTENLIVLGKY 210
+ +V IVILD++ + H +N I + +
Sbjct: 172 DLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 206
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 35.0 bits (79), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 62 SEQEERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFV 121
++++E K L+L+LD TL+H S KY++ + + +D V RP V
Sbjct: 151 AKEDEGKKCLILDLDETLVH--------SSFKYIEPADFVVSIEIDGLQHDVRVVKRPGV 202
Query: 122 RTFLEQASSLVDIYLCTMSTRCYAEAAVKLLD 153
FL++ + +I + T S YA+ + +LD
Sbjct: 203 DEFLKKMGDMFEIVVFTASLAKYADPVLDMLD 234
>sp|D3ZSK5|SETD6_RAT N-lysine methyltransferase SETD6 OS=Rattus norvegicus GN=Setd6 PE=3
SV=1
Length = 474
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 75 LDHTLLHCRNIKSLSSGEKYLKKQI----HSFIGSLFQMANDKLVKLRPFVRTFLEQASS 130
L+H H N++ + + + Q H + QMAN +L+ + F +
Sbjct: 251 LNHIANHNANLEYSAEYLRMVATQPILKGHEIFNTYGQMANWQLIHMYGFAEPYPNNTDD 310
Query: 131 LVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVRGQERGIVIL 190
DI + + EAA++ + +++ + R DF K +LV G+E VI
Sbjct: 311 TADIQMVAVR-----EAALQGTEDETERL--LLCERWDFLCKQ----ELV-GEEGAFVI- 357
Query: 191 DDTESVWSDHTENLIVLGKYVYFRDKELNGDHKSYSETLTDESENEE-ALANVLRVLKTI 249
E V ++ E L K + +E D+K + +E+E+ A+ N+ ++ ++
Sbjct: 358 -GREEVLTE--EELATTLKVLCMPAEEFR-DYKERAGWGEEETEDGSLAITNIPKLQESW 413
Query: 250 HRLFFDSVCGDVRTYLPKVRSEFSRDVLYFSAIFRDCLWAEQEEKFLVQEKKFLVH 305
RL DSV ++TY +++E +D+L ++ W EQ+ + +K ++H
Sbjct: 414 KRLLRDSVLLTLQTYATDLKTE--QDLLSNKEVYAKLSWREQQALQVRYGQKMILH 467
>sp|Q5SIW3|SECA_THET8 Protein translocase subunit SecA OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=secA PE=1 SV=1
Length = 997
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 123 TFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVRG 182
T L+ A L D + EA +L++ K + +R + +P L+R
Sbjct: 818 TLLDTAPQLQDFPFAELRALKAEEAVERLVEAALKAYEAR---------EAELSPPLMRA 868
Query: 183 QERGIVILDDTESVWSDHTENLIVLGKYVYFR 214
ER VIL+ ++ W +H NL VL + ++ R
Sbjct: 869 VER-FVILNVVDNAWKEHLHNLDVLRQGIFLR 899
>sp|Q72J92|SECA_THET2 Protein translocase subunit SecA OS=Thermus thermophilus (strain
HB27 / ATCC BAA-163 / DSM 7039) GN=secA PE=3 SV=1
Length = 997
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 123 TFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDFNGKDRKNPDLVRG 182
T L+ A L D + EA +L++ K + +R + +P L+R
Sbjct: 818 TLLDTAPQLQDFPFAELRALKAEEAVERLVEAALKAYEAR---------EAELSPPLMRA 868
Query: 183 QERGIVILDDTESVWSDHTENLIVLGKYVYFR 214
ER VIL+ ++ W +H NL VL + ++ R
Sbjct: 869 VER-FVILNVVDNAWKEHLHNLDVLRQGIFLR 899
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 66 ERKLQLVLNLDHTLLHCRNIKSLSSGEKYLKKQIHSFIGSLFQMANDKLVKLRPFVRTFL 125
++K L+L+LD TL+H + K + S + L +I + +++ V RP V FL
Sbjct: 225 QQKKCLILDLDETLVHS-SFKYMHSADFVLPVEIDDQVHNVY-------VIKRPGVDEFL 276
Query: 126 EQASSLVDIYLCTMSTRCYAEAAVKLLD 153
+ S L ++ + T S YA + LD
Sbjct: 277 NRVSQLYEVVVFTASVSRYANPLLDTLD 304
>sp|B2S075|SYG_BORHD Glycine--tRNA ligase OS=Borrelia hermsii (strain DAH) GN=glyQS PE=3
SV=1
Length = 445
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 254 FDSVCGDVRTYLP----KVRSEFSRDVLYFSAIFRDCLWAEQEEKFLVQEKKFLVHPRWI 309
F +V R +P +V F +++ + IFR C +F E +F VHP +
Sbjct: 154 FRNVLDSTRLKVPFGIAQVGKAFRNEIVAKNFIFRTC-------EFEQMEMQFFVHPNQM 206
Query: 310 DAYYFLWRRR 319
D +Y+ W+++
Sbjct: 207 DDWYYYWQQK 216
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 66 ERKLQLVLNLDHTLLHC--RNIKSLSSGEKYLKKQIHSFIG--SLFQMANDKLVKLRPFV 121
++K +LV++LD TL+H R+ +S + +L + G +L+ + RP+
Sbjct: 249 QKKKKLVIDLDETLIHSASRSTTHSNSSQGHLVEVKFGLSGIRTLY------FIHKRPYC 302
Query: 122 RTFLEQASSLVDIYLCTMSTRCYAEAAVKLLD 153
FL + S D+ + T S + YA+ + L+
Sbjct: 303 DLFLTKVSKWYDLIIFTASMKEYADPVIDWLE 334
>sp|Q60310|Y3411_METJA UPF0304 protein MJECS11 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJECS11 PE=3 SV=2
Length = 168
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 234 ENEEALANVLRVLKTIHRLFFDSVCGDVRTYLPKVRSEFSRDVLYFSAI 282
EN ++++L+ + +F+D + G + LP+ +F D+L F I
Sbjct: 21 ENTSEYDEIIKILEEGYEIFYDEILGHIFDELPESEGQFVLDILSFYDI 69
>sp|Q5S7T7|TIM50_PHYIN Mitochondrial import inner membrane translocase subunit TIM50
OS=Phytophthora infestans GN=TIM50 PE=2 SV=1
Length = 409
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 118 RPFVRTFLEQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIARED---FNGKDR 174
RP V FLE +L Y + ++ Y + + LD K + I++R+ NG
Sbjct: 195 RPGVDEFLE---TLCQYYEIVIFSQNYGAEEI-VQKLDPKQCALHILSRDATRYLNGAHV 250
Query: 175 KNPDLVRGQERGIVILDDTESVWSDHTENLIVLGKYVYFRDKELNGDHK 223
K+ + R +VILDD + + EN I + + RD++ DH+
Sbjct: 251 KDLSNLNRDLRQVVILDDDPAAYQLQPENAIPVTPFTNGRDRD---DHE 296
>sp|Q5YDB5|CPL2_ARATH RNA polymerase II C-terminal domain phosphatase-like 2
OS=Arabidopsis thaliana GN=CPL2 PE=1 SV=3
Length = 770
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 114 LVKLRPF---VRTFL-EQASSLVDIYLCTMSTRCYAEAAVKLLDLDSKYFSSRIIAREDF 169
LVKLRP +R++L + ++Y+CTM+ R YA +LLD ++ S + +
Sbjct: 255 LVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPEAHLISLKELRDRIV 314
Query: 170 NGKDRKNPDLVRGQERGI------VILDDTESVWSDHTENLI-VLGKYVYF 213
K L+ GI +++DD VW D + + V+ Y+ +
Sbjct: 315 CVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHVVSAYLPY 365
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,007,561
Number of Sequences: 539616
Number of extensions: 4699336
Number of successful extensions: 10796
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 10719
Number of HSP's gapped (non-prelim): 63
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)