BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040060
(241 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449432676|ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449518719|ref|XP_004166384.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
Length = 261
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/240 (87%), Positives = 224/240 (93%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F V+NVGKTLVTRTQGTKIASEGLKHRVFE+SL DL +EEHAY
Sbjct: 22 DPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQEDEEHAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLVRKWHTLIEA+VDVKTTDN+TLR+FCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIRRKMREIMV QA+SCDLK LV KFI E IG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV+RPADE E TEV+GA
Sbjct: 202 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADETAVEGATEVVGA 261
>gi|255552081|ref|XP_002517085.1| 40S ribosomal protein S3a, putative [Ricinus communis]
gi|223543720|gb|EEF45248.1| 40S ribosomal protein S3a, putative [Ricinus communis]
Length = 260
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/240 (85%), Positives = 223/240 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F+V+NVGKTLVTRTQGTKIASEGLKHRVFE+SL DL +E+HA
Sbjct: 21 ADPFSKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQGDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR PNQ+KRTCYAQ+SQI QIRRKMREIM AQAASCDLK LV KFI E IG+EIEKA
Sbjct: 141 GFTKRRPNQIKRTCYAQSSQIGQIRRKMREIMTAQAASCDLKELVRKFIPETIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVGVK++RPADEP+ EAP E +
Sbjct: 201 TSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLERPADEPMAEAPAETVA 260
>gi|449455292|ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449472057|ref|XP_004153483.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
Length = 260
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/240 (87%), Positives = 224/240 (93%), Gaps = 1/240 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F V+NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +EEHAY
Sbjct: 22 DPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQEDEEHAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLVRKWHTLIEA+VDVKTTDN+TLR+FCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV KFI E IG++IEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+E + E TEV+GA
Sbjct: 202 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEAV-EGATEVVGA 260
>gi|359806025|ref|NP_001241430.1| uncharacterized protein LOC100813273 [Glycine max]
gi|255642505|gb|ACU21516.1| unknown [Glycine max]
Length = 261
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/241 (85%), Positives = 223/241 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSLFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKMREIM QA SCDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEIIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVF+RKVKILKAPKFDLGKLMEVHGDYSEDVG KVDRPADE + E PTE++G
Sbjct: 201 TSSIYPLQNVFVRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADEIVAEEPTEIVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|359806537|ref|NP_001241005.1| uncharacterized protein LOC100805519 [Glycine max]
gi|255646854|gb|ACU23898.1| unknown [Glycine max]
Length = 261
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/241 (85%), Positives = 224/241 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQ+RQIRRKMREIMV QAA+CDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRSNQVKRTCYAQSSQVRQIRRKMREIMVNQAAACDLKELVRKFIPEMIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG KVDRPADE + E TEV+G
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADETLAEEATEVVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|118482920|gb|ABK93373.1| unknown [Populus trichocarpa]
gi|118483951|gb|ABK93864.1| unknown [Populus trichocarpa]
Length = 260
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/237 (86%), Positives = 220/237 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F V+NVGKTLVTRTQGTKIASEGLKHRVFE+SL DL +E+HA
Sbjct: 21 ADPFSKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQGDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQGKNVLTNFWGM+FT DKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMNFTNDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR PNQ+KRT YAQ+SQIRQIRRKMREIM AQA SCDLK LV KFI E IG+EIEKA
Sbjct: 141 GFTKRRPNQIKRTTYAQSSQIRQIRRKMREIMTAQATSCDLKELVRKFIPESIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTE 237
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVK++RPADEPI EAP E
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLERPADEPIAEAPAE 257
>gi|356535985|ref|XP_003536521.1| PREDICTED: 40S ribosomal protein S3a-like [Glycine max]
Length = 261
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/241 (85%), Positives = 223/241 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKMREIM QA +CDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATACDLKELVRKFIPEIIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVF+RKVKILKAPKFDLGKLMEVHGDYSEDVG KVDRPADE + E PTE++G
Sbjct: 201 TSSIYPLQNVFVRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADEIVAEEPTEIVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|224107967|ref|XP_002314671.1| predicted protein [Populus trichocarpa]
gi|222863711|gb|EEF00842.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/237 (86%), Positives = 220/237 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F V+NVGKTLVTRTQGTKIASEGLKHRVFE+SL DL +E+HA
Sbjct: 22 ADPFSKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQGDEDHA 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQGKNVLTNFWGM+FT DKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 82 YRKIRLRAEDVQGKNVLTNFWGMNFTNDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR PNQ+KRT YAQ+SQIRQIRRKMREIM AQA SCDLK LV KFI E IG+EIEKA
Sbjct: 142 GFTKRRPNQIKRTTYAQSSQIRQIRRKMREIMTAQATSCDLKELVRKFIPESIGKEIEKA 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTE 237
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVK++RPADEPI EAP E
Sbjct: 202 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLERPADEPIAEAPAE 258
>gi|406870061|gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/240 (86%), Positives = 222/240 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKHRVFE+SL DL N+E+ AY
Sbjct: 22 DPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQTSQIRQIRRKMREIMV QAASCDLK LV+KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQAASCDLKDLVQKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
+SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK+DRPAD+ E EV+GA
Sbjct: 202 TSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKIDRPADDVPMEGEPEVVGA 261
>gi|358248303|ref|NP_001239858.1| uncharacterized protein LOC100808747 [Glycine max]
gi|255646807|gb|ACU23875.1| unknown [Glycine max]
Length = 261
Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/241 (85%), Positives = 223/241 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+N+GKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+H+
Sbjct: 21 ADPFAKKDWYDIKAPSLFQVKNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDHS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKMREIMV QA +CDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATACDLKELVRKFIPEMIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG KVDRPADE + E TEV+G
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADETLAEEATEVVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|255635850|gb|ACU18272.1| unknown [Glycine max]
Length = 261
Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/241 (85%), Positives = 222/241 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTK ASEGLKHRVFEVSL DL +E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKTASEGLKHRVFEVSLADLQGDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
G TKR NQVKRTCYAQ+SQ+RQIRRKMREIMV QAA+CDLK LV KFI E+IG+EIEKA
Sbjct: 141 GLTKRRSNQVKRTCYAQSSQVRQIRRKMREIMVNQAAACDLKELVRKFIPEMIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG KVDRPADE + E TEV+G
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADETLAEEATEVVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|255642692|gb|ACU22108.1| unknown [Glycine max]
Length = 261
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/241 (84%), Positives = 222/241 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFEVSL DL + +HA
Sbjct: 21 ADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDGDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKMREIM QA +CDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATACDLKELVRKFIPEIIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVF+RKVKILKAPKFDLGKLMEVHGDYSEDVG KVDRPADE + E PTE++G
Sbjct: 201 TSSIYPLQNVFVRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADEIVAEEPTEIVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|217074782|gb|ACJ85751.1| unknown [Medicago truncatula]
gi|388492750|gb|AFK34441.1| unknown [Medicago truncatula]
Length = 261
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/241 (84%), Positives = 225/241 (93%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F+V+NVGKTLV+RTQGTKIAS+GLKHRVFEVSL DL +EEHA
Sbjct: 21 ADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASDGLKHRVFEVSLADLQGDEEHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQGKN+LTNFWGM+FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGKNLLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKM EIM+ QA+SCDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRANQVKRTCYAQSSQIRQIRRKMVEIMINQASSCDLKGLVHKFIPEMIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+EDVG KV+RPADE + E PTE++G
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDVGTKVERPADEMVTEEPTEIVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|118482974|gb|ABK93399.1| unknown [Populus trichocarpa]
Length = 261
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/241 (83%), Positives = 225/241 (93%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWY +KAPS F V+++G+TLVTRTQGTKIASEGLKHRVFEVSL DL N+E+HA
Sbjct: 21 ADPFSKKDWYVVKAPSGFTVKDIGRTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQG+NVLTNFWGMSFTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR PNQVKRTCYAQ+SQIRQIRRKMREIMV QA+SCDLK LV+KFI EVIG+EIEKA
Sbjct: 141 AFTKRCPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKDLVQKFIPEVIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
T+ IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS+D+GVK+DRPADE + E TEV+G
Sbjct: 201 TTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSQDIGVKIDRPADETVAEGETEVVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|358348322|ref|XP_003638196.1| 40S ribosomal protein S3a [Medicago truncatula]
gi|355504131|gb|AES85334.1| 40S ribosomal protein S3a [Medicago truncatula]
Length = 244
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/241 (84%), Positives = 225/241 (93%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F+V+NVGKTLV+RTQGTKIAS+GLKHRVFEVSL DL +EEHA
Sbjct: 4 ADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASDGLKHRVFEVSLADLQGDEEHA 63
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQGKN+LTNFWGM+FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 64 FRKIRLRAEDVQGKNLLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 123
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKM EIM+ QA+SCDLK LV KFI E+IG+EIEKA
Sbjct: 124 GFTKRRANQVKRTCYAQSSQIRQIRRKMVEIMINQASSCDLKGLVHKFIPEMIGKEIEKA 183
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+EDVG KV+RPADE + E PTE++G
Sbjct: 184 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDVGTKVERPADEMVTEEPTEIVG 243
Query: 241 A 241
A
Sbjct: 244 A 244
>gi|388490694|gb|AFK33413.1| unknown [Lotus japonicus]
Length = 261
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/240 (85%), Positives = 221/240 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E++A+
Sbjct: 22 DPFAKKDWYDIKAPSLFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDNAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVKRTCYAQ+SQIRQIRRKMREIM+ QA SCDLK LV KFI E+IG+EIEKAT
Sbjct: 142 FTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCDLKELVRKFIPEMIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG KVDRPADE + E TEV+GA
Sbjct: 202 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVDRPADETVVEGATEVVGA 261
>gi|224130690|ref|XP_002328352.1| predicted protein [Populus trichocarpa]
gi|222838067|gb|EEE76432.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/241 (83%), Positives = 225/241 (93%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWY +KAPS F V+++G+TLVTRTQGTKIASEGLKHRVFEVSL DL N+E+HA
Sbjct: 25 ADPFSKKDWYVVKAPSGFTVKDIGRTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHA 84
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQG+NVLTNFWGMSFTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 85 FRKIRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 144
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR PNQVKRTCYAQ+SQIRQIRRKMREIMV QA+SCDLK LV+KFI EVIG+EIEKA
Sbjct: 145 AFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKDLVQKFIPEVIGKEIEKA 204
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
T+ IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS+D+GVK+DRPADE + E TEV+G
Sbjct: 205 TTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSQDIGVKIDRPADETVAEGETEVVG 264
Query: 241 A 241
A
Sbjct: 265 A 265
>gi|118488090|gb|ABK95865.1| unknown [Populus trichocarpa]
Length = 259
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/237 (86%), Positives = 220/237 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F V+NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E++A
Sbjct: 21 ADPFSKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDNA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQG+NVLTNFWGM+FT DKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 YRKIRLRAEDVQGRNVLTNFWGMNFTNDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR PNQVKRT YAQ+SQIRQIRRKMREIM AQAASCDLK LV KFI E IG+EIEKA
Sbjct: 141 GFTKRRPNQVKRTTYAQSSQIRQIRRKMREIMTAQAASCDLKELVRKFIPESIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTE 237
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVK+DRPA+E + EAP E
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRPAEETMAEAPAE 257
>gi|357480901|ref|XP_003610736.1| 40S ribosomal protein S3a-like protein [Medicago truncatula]
gi|355512071|gb|AES93694.1| 40S ribosomal protein S3a-like protein [Medicago truncatula]
Length = 261
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/241 (84%), Positives = 222/241 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E++A
Sbjct: 21 ADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDNA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQGKN+LTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKMREIM+ QA SCDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCDLKDLVRKFIPEMIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG KV+RPADE + E E++G
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVERPADETMVEGTPEIVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|255542338|ref|XP_002512232.1| 40S ribosomal protein S3a, putative [Ricinus communis]
gi|223548193|gb|EEF49684.1| 40S ribosomal protein S3a, putative [Ricinus communis]
Length = 263
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/241 (85%), Positives = 222/241 (92%), Gaps = 1/241 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F+VRNVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E+HAY
Sbjct: 22 DPFAKKDWYDIKAPSVFKVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDHAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIE++VDVKTTDN+TLRLFCI
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIESHVDVKTTDNYTLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVKRTCYAQ+SQIRQIRRKMREI++ QAASCDLK LV KFI E IGREIEKAT
Sbjct: 142 FTKRRANQVKRTCYAQSSQIRQIRRKMREILINQAASCDLKELVLKFIPESIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
SSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYS +D+GVK++RPADE + E TEV+G
Sbjct: 202 SSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSADDIGVKLERPADELMAEGETEVVG 261
Query: 241 A 241
A
Sbjct: 262 A 262
>gi|224102101|ref|XP_002312545.1| predicted protein [Populus trichocarpa]
gi|222852365|gb|EEE89912.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/240 (85%), Positives = 220/240 (91%), Gaps = 3/240 (1%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F V+NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E++A
Sbjct: 17 ADPFSKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDNA 76
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQG+NVLTNFWGM+FT DKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 77 YRKIRLRAEDVQGRNVLTNFWGMNFTNDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 136
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR PNQVKRT YAQ+SQIRQIRRKMREIM AQAASCDLK LV KFI E IG+EIEKA
Sbjct: 137 GFTKRRPNQVKRTTYAQSSQIRQIRRKMREIMTAQAASCDLKELVRKFIPESIGKEIEKA 196
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLME---VHGDYSEDVGVKVDRPADEPIPEAPTE 237
TSSIYPLQNVFIRKVKILKAPKFDLGKLME VHGDYSEDVGVK+DRPA+E + EAP E
Sbjct: 197 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEASIVHGDYSEDVGVKLDRPAEETMAEAPAE 256
>gi|225432758|ref|XP_002283142.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
gi|269969539|sp|A5B4K1.1|RS3A1_VITVI RecName: Full=40S ribosomal protein S3a-1
gi|147766920|emb|CAN67522.1| hypothetical protein VITISV_020206 [Vitis vinifera]
gi|297737094|emb|CBI26295.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/241 (84%), Positives = 218/241 (90%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL +E+ A
Sbjct: 21 ADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQG+NVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLRLFCI
Sbjct: 81 YRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ NQ K+TCYAQ+SQIRQIRRKMREIM A SCDLK LV+KFI E IGREIEKA
Sbjct: 141 AFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADEP+ E TEVIG
Sbjct: 201 TSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKLERPADEPVAEGVTEVIG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|356515900|ref|XP_003526635.1| PREDICTED: 40S ribosomal protein S3a-like [Glycine max]
Length = 261
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/240 (82%), Positives = 218/240 (90%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYDIKAPS F+V+NVGKTLVTRTQGTK AS+GLKHRVFEVSL DL +E+HA+
Sbjct: 22 DPFTKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKTASDGLKHRVFEVSLADLQGDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKW TLIEA+ DVKTTDN+TLR+FCIG
Sbjct: 82 KKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWQTLIEAHADVKTTDNYTLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVKRTCYAQ+SQ++QIRRKM EIMV Q SCDLK +V K I E+IG+EIEKAT
Sbjct: 142 FTKRRSNQVKRTCYAQSSQVKQIRRKMTEIMVNQTTSCDLKEVVRKLIPEMIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSIYPLQNVFIRKVKILKAPKFDLGKLME+HGDYSEDVGVKVDRP DE +PE TEV+GA
Sbjct: 202 SSIYPLQNVFIRKVKILKAPKFDLGKLMEIHGDYSEDVGVKVDRPVDETMPEGATEVVGA 261
>gi|117671302|gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/240 (83%), Positives = 219/240 (91%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKHRVFE+SL DL N+E+ +Y
Sbjct: 22 DPFSKKDWYDIKAPSVFTVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDQSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA++DVKTTDN+TLRLFCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHIDVKTTDNYTLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQTSQIRQIRRKMREIM QA+SCDLK LV+KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQTSQIRQIRRKMREIMTNQASSCDLKELVQKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
+SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY ED GVK+DRP ++ E EV+GA
Sbjct: 202 TSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 261
>gi|75299406|sp|Q8GTE3.1|RS3A_CICAR RecName: Full=40S ribosomal protein S3a
gi|24817254|emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum]
Length = 261
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/241 (82%), Positives = 221/241 (91%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFE+SL DL +E++A
Sbjct: 21 ADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQGDEDNA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQGKNVLTNF+GM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PADE + E E++G
Sbjct: 201 TSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVGTKVESPADETVVEGTPEIVG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|82400124|gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum tuberosum]
Length = 260
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/241 (84%), Positives = 221/241 (91%), Gaps = 1/241 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADP+AKKDWYDIKAPS F VRNVGKTLVTRTQGTKIASEGLKHRVFEVSL DL N+E+H+
Sbjct: 21 ADPYAKKDWYDIKAPSVFGVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQG+NVLTNF GM FTTDKLRSLV+KW +LIEA+VDVKTTD++TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ PNQ KRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV KFI E IGREIEKA
Sbjct: 141 GFTKKRPNQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVLKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSIYPLQNVFIRKVKILKAPKFDLG+LMEVHGDYSEDVGVKVDRPA E + PTEV+G
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGRLMEVHGDYSEDVGVKVDRPA-EDVATEPTEVVG 259
Query: 241 A 241
A
Sbjct: 260 A 260
>gi|269849762|sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
protein
Length = 261
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/242 (83%), Positives = 222/242 (91%), Gaps = 2/242 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F VRNVGKTLVTRTQGTKIASEGL+HRVFE+SL DL +E+H+
Sbjct: 21 ADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDHS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAED+QGKNVLTNFWGM FTTDKLRSLVRKW +LIEA+VDVKTTD++TLR+FCI
Sbjct: 81 FRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ KRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV+KFI E IGREIEKA
Sbjct: 141 GFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPIPEAPTEVI 239
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPA+E + E PTEVI
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDIGTKLDRPAEEAVAE-PTEVI 259
Query: 240 GA 241
GA
Sbjct: 260 GA 261
>gi|218186713|gb|EEC69140.1| hypothetical protein OsI_38068 [Oryza sativa Indica Group]
Length = 818
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/239 (84%), Positives = 218/239 (91%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIMV QA+SCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
SSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY EDVG K++RPA++ + E + +IG
Sbjct: 202 SSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYKEDVGTKLERPAEDEVVERDSSIIG 260
>gi|115488288|ref|NP_001066631.1| Os12g0406200 [Oryza sativa Japonica Group]
gi|108862547|gb|ABG21991.1| 40S ribosomal protein S3a, putative, expressed [Oryza sativa
Japonica Group]
gi|113649138|dbj|BAF29650.1| Os12g0406200 [Oryza sativa Japonica Group]
Length = 260
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/230 (86%), Positives = 213/230 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIMV QA+SCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPI 231
SSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY EDVG K++RPA++ +
Sbjct: 202 SSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYKEDVGTKLERPAEDEV 251
>gi|15236171|ref|NP_195193.1| 40S ribosomal protein S3a-2 [Arabidopsis thaliana]
gi|19884297|sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2
gi|2661422|emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]
gi|3096936|emb|CAA18846.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]
gi|7270417|emb|CAB80184.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]
gi|17064848|gb|AAL32578.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]
gi|332661008|gb|AEE86408.1| 40S ribosomal protein S3a-2 [Arabidopsis thaliana]
Length = 262
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/241 (82%), Positives = 216/241 (89%), Gaps = 1/241 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E++AY
Sbjct: 22 DPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDNAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLT FWGM FTTDKLRSLV+KW TLIEA+VDVKTTD +TLR+FCI
Sbjct: 82 RKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLK LV KFI E IGREIEKAT
Sbjct: 142 FTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ EDVGVKVDRPADE + E PTE+IG
Sbjct: 202 QGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIG 261
Query: 241 A 241
A
Sbjct: 262 A 262
>gi|122196609|sp|Q285L8.1|RS3A_TOBAC RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07
gi|76262913|gb|ABA41527.1| cyc07 [Nicotiana tabacum]
Length = 261
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/241 (81%), Positives = 218/241 (90%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADP+AKKDWYDIKAPS F ++NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E+ +
Sbjct: 21 ADPYAKKDWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDQS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLV+KW TLIEA+VDVKTTD++TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ KRTCYAQ+SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKA
Sbjct: 141 AFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
TSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPADE + EA E+ G
Sbjct: 201 TSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPADETVAEAEPEIPG 260
Query: 241 A 241
A
Sbjct: 261 A 261
>gi|225451279|ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
Length = 261
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/226 (87%), Positives = 210/226 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL N+E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ NQ K+T YAQ+SQIRQIRRKMREIM QAASCDLK LV KFI E+IGREIEKA
Sbjct: 141 AFTKKRQNQNKKTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVK++RP
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERP 246
>gi|222616957|gb|EEE53089.1| hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
Length = 764
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/232 (86%), Positives = 214/232 (92%), Gaps = 1/232 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIMV QA+SCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA-DEPIP 232
SSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY EDVG K++RPA DE +P
Sbjct: 202 SSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYKEDVGTKLERPAEDEVVP 253
>gi|297802494|ref|XP_002869131.1| 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]
gi|297314967|gb|EFH45390.1| 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/241 (82%), Positives = 216/241 (89%), Gaps = 1/241 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E++AY
Sbjct: 22 DPFSKKDWYDVKAPASFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQVDEDNAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLT FWGM FTTDKLRSLV+KW TLIEA+VDVKTTD +TLRLFCI
Sbjct: 82 RKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLK LV KFI E IGREIEKAT
Sbjct: 142 FTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ EDVGVKVDRPADE + E PTE+IG
Sbjct: 202 QGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMAEEPTEIIG 261
Query: 241 A 241
A
Sbjct: 262 A 262
>gi|222622621|gb|EEE56753.1| hypothetical protein OsJ_06287 [Oryza sativa Japonica Group]
Length = 399
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/227 (84%), Positives = 211/227 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLRAEDVQG+NVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAD 228
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVG+K+DRPA+
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGMKLDRPAE 248
>gi|1350984|sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a
gi|469248|gb|AAA80978.1| ribosomal protein S3a [Helianthus annuus]
Length = 260
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/225 (86%), Positives = 210/225 (93%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KKDWYDIKAPS F RNVGKTLVTRTQGTKIASEGLKHRVFEVSL DL N+E+H+
Sbjct: 21 ADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQGKNVLTNFWGM TTDKLRSLV+KW +LIEA+VDVKTTDNFTLR+FCI
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQVKRTCYAQ+SQI+QIRRKMREIMV QA +CDLK LV+KFI E IGREIEKA
Sbjct: 141 GFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR 225
TSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DR
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDR 245
>gi|297828990|ref|XP_002882377.1| 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]
gi|297328217|gb|EFH58636.1| 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/241 (82%), Positives = 216/241 (89%), Gaps = 1/241 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAPS F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E++AY
Sbjct: 22 DPFSKKDWYDVKAPSNFTKRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQVDEDNAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVL FWGM FTTDKLRSLV+KW TLIEA+VDVKTTDN+TLRLFCI
Sbjct: 82 RKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDNYTLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVKRTCYAQ+SQIRQIRRKMR+IM+ +A+SCDLK LV KFI E IGREIEKAT
Sbjct: 142 FTKRRANQVKRTCYAQSSQIRQIRRKMRDIMIKEASSCDLKDLVAKFIPEAIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDY+ EDVGVKVDRPADE E PTE+IG
Sbjct: 202 QGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYTAEDVGVKVDRPADEMAVEEPTEIIG 261
Query: 241 A 241
A
Sbjct: 262 A 262
>gi|15229364|ref|NP_187135.1| 40S ribosomal protein S3a-1 [Arabidopsis thaliana]
gi|75308953|sp|Q9CAV0.3|RS3A1_ARATH RecName: Full=40S ribosomal protein S3a-1
gi|12322852|gb|AAG51414.1|AC009465_14 putative 40S ribosomal protein S3A (S phase specific); 75194-73527
[Arabidopsis thaliana]
gi|17065440|gb|AAL32874.1| putative 40S ribosomal protein S3A (S phase specific) [Arabidopsis
thaliana]
gi|20148513|gb|AAM10147.1| putative 40S ribosomal protein S3A (S phase specific) [Arabidopsis
thaliana]
gi|21553921|gb|AAM63004.1| putative 40S ribosomal protein S3A (S phase specific) [Arabidopsis
thaliana]
gi|332640622|gb|AEE74143.1| 40S ribosomal protein S3a-1 [Arabidopsis thaliana]
Length = 262
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/241 (82%), Positives = 216/241 (89%), Gaps = 1/241 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAPS F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E++AY
Sbjct: 22 DPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDNAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVL FWGM FTTDKLRSLV+KW TLIEA+VDVKTTD++TLRLFCI
Sbjct: 82 RKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVKRTCYAQ+SQIRQIRRKMR+IMV +A+SCDLK LV KFI E IGREIEKAT
Sbjct: 142 FTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCDLKDLVAKFIPEAIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPADE E PTE+IG
Sbjct: 202 QGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDVGVKVDRPADEMAVEEPTEIIG 261
Query: 241 A 241
A
Sbjct: 262 A 262
>gi|115445597|ref|NP_001046578.1| Os02g0287000 [Oryza sativa Japonica Group]
gi|47847734|dbj|BAD21513.1| putative ribosomal protein S3a, cytosolic [Oryza sativa Japonica
Group]
gi|47847921|dbj|BAD21711.1| putative ribosomal protein S3a, cytosolic [Oryza sativa Japonica
Group]
gi|113536109|dbj|BAF08492.1| Os02g0287000 [Oryza sativa Japonica Group]
gi|125539010|gb|EAY85405.1| hypothetical protein OsI_06784 [Oryza sativa Indica Group]
Length = 261
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/227 (84%), Positives = 211/227 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLRAEDVQG+NVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAD 228
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVG+K+DRPA+
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGMKLDRPAE 248
>gi|115451377|ref|NP_001049289.1| Os03g0200500 [Oryza sativa Japonica Group]
gi|1350986|sp|P49397.2|RS3A_ORYSJ RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
protein
gi|483431|dbj|BAA05059.1| cyc07 [Oryza sativa]
gi|108706696|gb|ABF94491.1| 40S ribosomal protein S3a, putative, expressed [Oryza sativa
Japonica Group]
gi|113547760|dbj|BAF11203.1| Os03g0200500 [Oryza sativa Japonica Group]
gi|125542785|gb|EAY88924.1| hypothetical protein OsI_10409 [Oryza sativa Indica Group]
gi|125585284|gb|EAZ25948.1| hypothetical protein OsJ_09804 [Oryza sativa Japonica Group]
gi|215697346|dbj|BAG91340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737408|dbj|BAG96538.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 262
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/229 (85%), Positives = 211/229 (92%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTD + LRLFCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM QA+SCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
SSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY+ ED+G K+DRPA++
Sbjct: 202 SSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAED 250
>gi|242050788|ref|XP_002463138.1| hypothetical protein SORBIDRAFT_02g038370 [Sorghum bicolor]
gi|241926515|gb|EER99659.1| hypothetical protein SORBIDRAFT_02g038370 [Sorghum bicolor]
Length = 263
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/241 (81%), Positives = 215/241 (89%), Gaps = 1/241 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL ++E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAED+QG+NVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDIQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM QA++CDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMTEIMSNQASTCDLKELVSKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
SSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDY+ EDVGVK+DRPA+ EV
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYAKEDVGVKMDRPAEGDEAMGGQEVAA 261
Query: 241 A 241
A
Sbjct: 262 A 262
>gi|116781967|gb|ABK22319.1| unknown [Picea sitchensis]
Length = 245
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/240 (82%), Positives = 217/240 (90%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F R VGKTLVTRTQGTKIASEGLKHRVFE+SL DL N+E+ A+
Sbjct: 6 DPFTKKDWYDVKAPSTFNTRTVGKTLVTRTQGTKIASEGLKHRVFELSLADLQNDEDQAF 65
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQG+NVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCIG
Sbjct: 66 RKIKLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIG 125
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIRRKM EIM+ +A+SCDLK LV KFI EVIG+EIEKAT
Sbjct: 126 FTKRRPNQVKRTCYAQSSQIRQIRRKMTEIMIREASSCDLKELVAKFIPEVIGKEIEKAT 185
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR +E EA E++GA
Sbjct: 186 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRTTEEAPAEAEAELVGA 245
>gi|75312360|sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07
gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/240 (81%), Positives = 216/240 (90%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAP+ F+ +NVGKTLV+RTQGTKIASEGLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFAKKDWYDIKAPNVFQNKNVGKTLVSRTQGTKIASEGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNF+GM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ KRTCYAQ+SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKAT
Sbjct: 142 FTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK++RP +E + E TEV+GA
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERPIEETMVEGETEVVGA 261
>gi|357114466|ref|XP_003559021.1| PREDICTED: 40S ribosomal protein S3a-like [Brachypodium distachyon]
Length = 265
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/242 (81%), Positives = 213/242 (88%), Gaps = 2/242 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYDIKAP F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+ AY
Sbjct: 22 DPFTKKEWYDIKAPLIFSTRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQADEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+ LR+FCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIRRKM EIMV QA SCDLK LV+KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQSSQIRQIRRKMVEIMVNQATSCDLKELVQKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA--DEPIPEAPTEVI 239
SSI+PLQ+VF+RKVKILKAPKFDLGKLMEVHGDY EDVG+KVDRPA DE I +V
Sbjct: 202 SSIFPLQSVFVRKVKILKAPKFDLGKLMEVHGDYKEDVGMKVDRPAEGDEAIIPGAEDVA 261
Query: 240 GA 241
A
Sbjct: 262 AA 263
>gi|242050786|ref|XP_002463137.1| hypothetical protein SORBIDRAFT_02g038365 [Sorghum bicolor]
gi|241926514|gb|EER99658.1| hypothetical protein SORBIDRAFT_02g038365 [Sorghum bicolor]
Length = 263
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/241 (80%), Positives = 215/241 (89%), Gaps = 1/241 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VR++GKTLV+RTQGTKIASEGLKHRVFEVSL DL ++E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRDIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAED+QG+NVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDIQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM QA++CDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMTEIMSNQASTCDLKELVSKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
SSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDY+ EDVGVK+DRPA+ EV
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYAKEDVGVKMDRPAEGDEAMGGQEVAA 261
Query: 241 A 241
A
Sbjct: 262 A 262
>gi|357140906|ref|XP_003572000.1| PREDICTED: 40S ribosomal protein S3a-like [Brachypodium distachyon]
Length = 265
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/236 (83%), Positives = 213/236 (90%), Gaps = 3/236 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYDIKAP F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFTKKEWYDIKAPLLFNTRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM FTTDKLRSLV+KW TLIEA+VDVKTTDN+ +R+FCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMIRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIRRKM EIM+ QAASCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQSSQIRQIRRKMVEIMINQAASCDLKELVAKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPA--DEPIPEA 234
SSI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY EDVGVK+DRPA DE IP A
Sbjct: 202 SSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYGKEDVGVKLDRPAEGDEAIPGA 257
>gi|413956686|gb|AFW89335.1| 40S ribosomal protein S3a [Zea mays]
Length = 332
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/234 (82%), Positives = 212/234 (90%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IASEGLKHRVFEV L DL +E+ AY
Sbjct: 94 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEGLKHRVFEVCLADLQGDEDQAY 153
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 154 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 213
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 214 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 273
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP--ADEPIPE 233
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP DE + E
Sbjct: 274 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEGDEAVQE 327
>gi|413956681|gb|AFW89330.1| 40S ribosomal protein S3a [Zea mays]
gi|413956682|gb|AFW89331.1| 40S ribosomal protein S3a [Zea mays]
gi|413956683|gb|AFW89332.1| 40S ribosomal protein S3a [Zea mays]
Length = 330
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/234 (82%), Positives = 212/234 (90%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IASEGLKHRVFEV L DL +E+ AY
Sbjct: 92 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEGLKHRVFEVCLADLQGDEDQAY 151
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 152 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 211
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 212 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 271
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP--ADEPIPE 233
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP DE + E
Sbjct: 272 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEGDEAVQE 325
>gi|226533074|ref|NP_001152574.1| 40S ribosomal protein S3a [Zea mays]
gi|195657651|gb|ACG48293.1| 40S ribosomal protein S3a [Zea mays]
gi|413956679|gb|AFW89328.1| 40S ribosomal protein S3a [Zea mays]
Length = 260
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/234 (82%), Positives = 212/234 (90%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IASEGLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP--ADEPIPE 233
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP DE + E
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEGDEAVQE 255
>gi|226499480|ref|NP_001141038.1| uncharacterized protein LOC100273118 [Zea mays]
gi|194690324|gb|ACF79246.1| unknown [Zea mays]
gi|194702340|gb|ACF85254.1| unknown [Zea mays]
gi|413956687|gb|AFW89336.1| hypothetical protein ZEAMMB73_605321 [Zea mays]
Length = 260
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/240 (80%), Positives = 214/240 (89%), Gaps = 2/240 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IASEGLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP + EA EV A
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEG--DEAGQEVAAA 259
>gi|357113557|ref|XP_003558569.1| PREDICTED: 40S ribosomal protein S3a-like [Brachypodium distachyon]
Length = 264
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 2/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYDIKAP F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+ A+
Sbjct: 22 DPFTKKEWYDIKAPLLFSTRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQADEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+ LR+FCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIRRKM EIM QA SCDLK LV+KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQSSQIRQIRRKMVEIMANQATSCDLKELVQKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA--DEPIP 232
SSI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY EDVG+KVDRPA DE +P
Sbjct: 202 SSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGMKVDRPADGDEAVP 254
>gi|224284693|gb|ACN40078.1| unknown [Picea sitchensis]
Length = 260
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/240 (82%), Positives = 217/240 (90%), Gaps = 1/240 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F R VGKTLVTRTQGTKIASEGLKHRVFE+SL DL NE++ A+
Sbjct: 22 DPFTKKDWYDVKAPSTFNTRTVGKTLVTRTQGTKIASEGLKHRVFELSLADLQNEDQ-AF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQG+NVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCIG
Sbjct: 81 RKIKLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIRRKM EIM+ +A+SCDLK LV KFI EVIG+EIEKAT
Sbjct: 141 FTKRRPNQVKRTCYAQSSQIRQIRRKMTEIMIREASSCDLKELVAKFIPEVIGKEIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR +E EA E++GA
Sbjct: 201 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRTTEEAPAEAEAELVGA 260
>gi|226503065|ref|NP_001149096.1| 40S ribosomal protein S3a [Zea mays]
gi|195624716|gb|ACG34188.1| 40S ribosomal protein S3a [Zea mays]
gi|223974835|gb|ACN31605.1| unknown [Zea mays]
Length = 260
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/240 (80%), Positives = 214/240 (89%), Gaps = 2/240 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IAS+GLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASDGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP + EA EV A
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEG--DEAMQEVAAA 259
>gi|1350981|sp|P49396.2|RS3A_BRARA RecName: Full=40S ribosomal protein S3a; AltName: Full=S
phase-specific protein BIS289
gi|387909|gb|AAA33013.1| S-phase-specific protein [Brassica rapa]
gi|397401|emb|CAA81030.1| unnamed protein product [Brassica rapa]
Length = 262
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/242 (81%), Positives = 215/242 (88%), Gaps = 3/242 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFAKKDWYDIKAPS F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+ AY
Sbjct: 22 DPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLT FWGM FTTDKLRSLV+KW TLIE++VDVKTTDN+TLRLFCI
Sbjct: 82 RKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMV-AQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR NQVKRTCYAQ+SQIRQIR KMREIM+ +A+SCDLK LV KFI E IG++IEKA
Sbjct: 142 FTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKA 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVI 239
T IYPLQNVFIRKVKILKAPKFDL KLMEVHGDY+ EDVGVKVDRPADE + E PTE+I
Sbjct: 202 TQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRPADEVVEE-PTEII 260
Query: 240 GA 241
GA
Sbjct: 261 GA 262
>gi|195622874|gb|ACG33267.1| 40S ribosomal protein S3a [Zea mays]
Length = 260
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/240 (80%), Positives = 213/240 (88%), Gaps = 2/240 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IAS+GLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASDGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTT N+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTXNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP + EA EV A
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEG--DEAMQEVAAA 259
>gi|195624456|gb|ACG34058.1| 40S ribosomal protein S3a [Zea mays]
Length = 260
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/240 (80%), Positives = 213/240 (88%), Gaps = 2/240 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IAS+GLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASDGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQ +NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQDRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP + EA EV A
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEG--DEAMQEVAAA 259
>gi|81074465|gb|ABB55367.1| cyc07-like [Solanum tuberosum]
gi|82400110|gb|ABB72794.1| cyc07-like protein [Solanum tuberosum]
Length = 261
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/226 (84%), Positives = 207/226 (91%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADP+AKKDWYDIKAPS F ++NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E+ A
Sbjct: 21 ADPYAKKDWYDIKAPSVFEIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQG+NVLTNF GM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCI
Sbjct: 81 YRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ KRTCYAQ+SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKA
Sbjct: 141 AFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
TSSI+PLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVGVK+DRP
Sbjct: 201 TSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRP 246
>gi|326488521|dbj|BAJ93929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/238 (81%), Positives = 212/238 (89%), Gaps = 3/238 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYDIKAP+ F RN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+ A+
Sbjct: 22 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM QA++CDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEV 238
SSI+PLQNV++RKVKILKAPKFD+GKLMEVHGDY+ EDVGVK++RPA+ EA EV
Sbjct: 202 SSIFPLQNVYVRKVKILKAPKFDIGKLMEVHGDYNKEDVGVKLERPAEA--DEAGVEV 257
>gi|82623437|gb|ABB87133.1| 40S ribosomal protein S3a-like [Solanum tuberosum]
Length = 261
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/226 (84%), Positives = 207/226 (91%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADP+AKKDWYDIKAPS F ++NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E+ A
Sbjct: 21 ADPYAKKDWYDIKAPSVFEIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQG+NVLTNF GM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ KRTCYAQ+SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKA
Sbjct: 141 AFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
TSSI+PLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVGVK+DRP
Sbjct: 201 TSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRP 246
>gi|81074079|gb|ABB55362.1| cyc07-like [Solanum tuberosum]
gi|82400152|gb|ABB72815.1| cyc07-like protein [Solanum tuberosum]
Length = 261
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/226 (83%), Positives = 207/226 (91%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADP+AKKDWYDIKAPS F ++NVGKTLVTRTQGTKIAS+GLKHRVFEVSL DL +E+ A
Sbjct: 21 ADPYAKKDWYDIKAPSVFEIKNVGKTLVTRTQGTKIASDGLKHRVFEVSLADLQKDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAEDVQG+NVLTNF GM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCI
Sbjct: 81 FRKIRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ KRTCYAQ+SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKA
Sbjct: 141 AFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
TSSI+PLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVGVK+DRP
Sbjct: 201 TSSIFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRP 246
>gi|302811169|ref|XP_002987274.1| hypothetical protein SELMODRAFT_271906 [Selaginella moellendorffii]
gi|302811285|ref|XP_002987332.1| hypothetical protein SELMODRAFT_271907 [Selaginella moellendorffii]
gi|302814973|ref|XP_002989169.1| hypothetical protein SELMODRAFT_184408 [Selaginella moellendorffii]
gi|302815055|ref|XP_002989210.1| hypothetical protein SELMODRAFT_160008 [Selaginella moellendorffii]
gi|300143069|gb|EFJ09763.1| hypothetical protein SELMODRAFT_184408 [Selaginella moellendorffii]
gi|300143110|gb|EFJ09804.1| hypothetical protein SELMODRAFT_160008 [Selaginella moellendorffii]
gi|300144909|gb|EFJ11589.1| hypothetical protein SELMODRAFT_271906 [Selaginella moellendorffii]
gi|300144967|gb|EFJ11647.1| hypothetical protein SELMODRAFT_271907 [Selaginella moellendorffii]
Length = 263
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/228 (82%), Positives = 207/228 (90%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA S F VR +GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E+HA+
Sbjct: 22 DPFSKKDWYDVKAMSTFNVRQIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQG+NVLTNFWGM FTTDKLRSLVRKW +LIEA+VDVKTTDN+TLRLFCIG
Sbjct: 82 RKIKLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDNYTLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ+SQIRQIR+KMREIMV +A SCDLK LV KFI EVIG+EIEK T
Sbjct: 142 FTKRRPNQVKRTCYAQSSQIRQIRKKMREIMVREAQSCDLKDLVAKFIPEVIGKEIEKVT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 229
+ IYPLQN +IRKVKILKAPKFDLGKLMEVHGDYSED GVKV+RP +
Sbjct: 202 AGIYPLQNTYIRKVKILKAPKFDLGKLMEVHGDYSEDTGVKVERPVGD 249
>gi|4079800|gb|AAC98779.1| S-phase-specific ribosomal protein [Oryza sativa Japonica Group]
Length = 261
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/227 (81%), Positives = 208/227 (91%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLRNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLRAEDVQG+NVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ ++ + RRKM EIM QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 142 FTKRRPNQVKRTCYAQVARSGRSRRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAD 228
SSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVG+K+DRPA+
Sbjct: 202 SSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGMKLDRPAE 248
>gi|217903|dbj|BAA00860.1| cyc07 [Catharanthus roseus]
Length = 245
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/218 (85%), Positives = 203/218 (93%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F VRNVGKTLVTRTQGTKIASEGL+HRVFE+SL DL +E+H+
Sbjct: 21 ADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDHS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAED+QGKNVLTNFWGM FTTDKLRSLVRKW +LIEA+VDVKTTD++TLR+FCI
Sbjct: 81 FRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ KRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV+KFI E IGREIEKA
Sbjct: 141 GFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 218
TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ED
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNED 238
>gi|1856971|dbj|BAA05057.1| cyc07 [Catharanthus roseus]
Length = 245
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/218 (85%), Positives = 202/218 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F VRNVGKTLVTRTQGTKIASEGLKHRVFE+SL DL +E+H+
Sbjct: 21 ADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLKHRVFEISLADLQGDEDHS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKIRLRAED+QGKNVLTNFWGM FTTDKLRSLVRKW +LIEA+VDVKTTD++TLR+FCI
Sbjct: 81 FRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ KRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV+KFI E IGREIEKA
Sbjct: 141 GFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAPSCDLKDLVQKFIPESIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 218
T SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ED
Sbjct: 201 TPSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNED 238
>gi|61807078|gb|AAX55706.1| cyc07 [Vitis vinifera]
Length = 237
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/224 (85%), Positives = 203/224 (90%), Gaps = 2/224 (0%)
Query: 3 PFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYR 62
PFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRV +SL DL N+E+ AYR
Sbjct: 1 PFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVSGISLADLQNDEDRAYR 60
Query: 63 KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGF 122
KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI F
Sbjct: 61 KIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAF 120
Query: 123 TKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
TKR Q +T YAQ+SQIRQIRRKMREIM QAASCDLK LV KFI E+IGREIEKATS
Sbjct: 121 TKRSTRQ--KTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATS 178
Query: 183 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVK++RP
Sbjct: 179 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERP 222
>gi|82400138|gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]
Length = 260
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/223 (83%), Positives = 204/223 (91%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRK 63
+AKKDWYDIKAPS F ++NVGKTLVTRTQGTKIAS+GLKHRVFEVSL DL +E+ A+RK
Sbjct: 23 YAKKDWYDIKAPSVFEIKNVGKTLVTRTQGTKIASDGLKHRVFEVSLADLQKDEDQAFRK 82
Query: 64 IRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFT 123
IRLRAEDVQG+NVLTNF GM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCI FT
Sbjct: 83 IRLRAEDVQGRNVLTNFHGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIAFT 142
Query: 124 KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS 183
K+ PNQ KRTCYAQ+SQIRQIRRKM EIM QA+SCDLK LV KFI E IGREIEKATSS
Sbjct: 143 KKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKATSS 202
Query: 184 IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
I+PLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVGVK+DRP
Sbjct: 203 IFPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLDRP 245
>gi|168016964|ref|XP_001761018.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687704|gb|EDQ74085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/236 (77%), Positives = 206/236 (87%), Gaps = 3/236 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F +N+GKTLVTRT GTKIAS+GLK RVFEVSL DL N+E+ A+
Sbjct: 22 DPFSKKDWYDIKAPNTFTQKNLGKTLVTRTAGTKIASDGLKGRVFEVSLADLQNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIEA+VDVKTTDN+ +R+FCI
Sbjct: 82 RKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEAHVDVKTTDNYQIRMFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+TCYAQ+SQIRQIRRKMREIMV +A SCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTCYAQSSQIRQIRRKMREIMVREAQSCDLKELVAKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAD---EPIPEA 234
IYPLQN FIRKVKILKAPKFDL KLMEVHGDYSE+VG K++RP EP+ EA
Sbjct: 202 QGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKIERPVGDEAEPVAEA 257
>gi|168026896|ref|XP_001765967.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682873|gb|EDQ69288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/234 (77%), Positives = 205/234 (87%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F +++GKTLVTRT GTKIAS+GLK RVFEVSL DL N+E+ A+
Sbjct: 22 DPFSKKDWYDIKAPNTFTQKSLGKTLVTRTAGTKIASDGLKGRVFEVSLADLQNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIE++VDVKTTDN+ LR+FCI
Sbjct: 82 RKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIESHVDVKTTDNYMLRIFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+TCYAQ+SQIRQIRRKMREIM +A SCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTREAQSCDLKELVAKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP-ADEPIPEA 234
IYPLQN FIRKVKILKAPKFDL KLMEVHGDYSE+VG K++RP DEP EA
Sbjct: 202 QGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKIERPVGDEPAAEA 255
>gi|269969547|sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2
Length = 234
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/210 (87%), Positives = 194/210 (92%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL N+E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ NQ K+T YAQ+SQIRQIRRKMREIM QAASCDLK LV KFI E+IGREIEKA
Sbjct: 141 AFTKKRQNQNKKTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLME 210
TSSIYPLQNVFIRKVKILKAPKFDLGKLME
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLGKLME 230
>gi|168044325|ref|XP_001774632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674052|gb|EDQ60566.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 264
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/225 (78%), Positives = 200/225 (88%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F +++GKTLVTRT GTKIAS+GLK RVFEVSL DL N+E+ A+
Sbjct: 22 DPFSKKDWYDIKAPNTFTQKSLGKTLVTRTAGTKIASDGLKGRVFEVSLADLQNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIEA+VDVKTTDN+ LR+FCI
Sbjct: 82 RKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEAHVDVKTTDNYQLRIFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+TCYAQ+SQIRQIRRKMREIM +A +CDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTREAQTCDLKELVAKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
IYPLQN FIRKVKILKAPKFDL KLMEVHGDYSE+VG K+DRP
Sbjct: 202 QGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKIDRP 246
>gi|168029626|ref|XP_001767326.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681390|gb|EDQ67817.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/239 (75%), Positives = 205/239 (85%), Gaps = 1/239 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F + +GKTLVTRT GTKIAS+GLK RVFEVSL DL N+E+ A+
Sbjct: 22 DPFSKKDWYDIKAPNIFTQKALGKTLVTRTAGTKIASDGLKGRVFEVSLADLQNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIEA+VDVKTTDN+ LR+FCI
Sbjct: 82 RKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEAHVDVKTTDNYQLRIFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+TCYAQ+SQIRQIRRKMREIM +A SCDLK LV KFI E IG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTKEAQSCDLKELVGKFIPEAIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP-ADEPIPEAPTEVI 239
IYPLQN FIRKVKILKAPKFDL KLMEVHGDYSE+VG K++RP D+ EA TE +
Sbjct: 202 QGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKIERPVGDDAETEAVTEPV 260
>gi|255633508|gb|ACU17112.1| unknown [Glycine max]
Length = 227
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/206 (86%), Positives = 194/206 (94%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI
Sbjct: 81 FKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR NQVKRTCYAQ+SQ+RQIRRKMREIMV QAA+CDLK LV KFI E+IG+EIEKA
Sbjct: 141 GFTKRRSNQVKRTCYAQSSQVRQIRRKMREIMVNQAAACDLKELVRKFIPEMIGKEIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLG 206
TSSIYPLQNVFIRKVKILKAPKFDLG
Sbjct: 201 TSSIYPLQNVFIRKVKILKAPKFDLG 226
>gi|168005481|ref|XP_001755439.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693567|gb|EDQ79919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/225 (78%), Positives = 200/225 (88%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F +++GKTLVTRT GTKIAS+GLK RVFEVSL DL N+E+ A+
Sbjct: 22 DPFSKKDWYDIKAPNTFTQKSLGKTLVTRTAGTKIASDGLKGRVFEVSLADLQNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIEA+VDVKTTDN+ LR+FCI
Sbjct: 82 RKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEAHVDVKTTDNYQLRIFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+TCYAQ+SQIRQIRRKMREIM +A +CDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTKEAQTCDLKELVAKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
IYPLQN FIRKVKILKAPKFDL KLMEVHGDYSE+VG K++RP
Sbjct: 202 QGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKIERP 246
>gi|168049729|ref|XP_001777314.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671290|gb|EDQ57844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/231 (77%), Positives = 201/231 (87%), Gaps = 6/231 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTK------IASEGLKHRVFEVSLGDLLN 55
DPF+KKDWYDIKAP+ F +N+GKTLVTRT GTK IAS+GLK RVFEVSL DL N
Sbjct: 22 DPFSKKDWYDIKAPNTFTQKNLGKTLVTRTAGTKAISSSDIASDGLKGRVFEVSLADLQN 81
Query: 56 EEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTL 115
+E+ A+RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIEA+VDVKTTDN+ +
Sbjct: 82 DEDQAFRKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEAHVDVKTTDNYMI 141
Query: 116 RLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGR 175
R+FCI FTK+ PNQ+K+TCYAQTSQIRQIRRKMREIMV +A SCDLK LV KFI EVIG+
Sbjct: 142 RMFCIAFTKKRPNQIKKTCYAQTSQIRQIRRKMREIMVREAQSCDLKELVAKFIPEVIGK 201
Query: 176 EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP 226
EIEKAT IYPLQN FIRKVKILKAPKFDL KLMEVHGDYSE+VG K++RP
Sbjct: 202 EIEKATQGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGAKIERP 252
>gi|449522030|ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Cucumis
sativus]
Length = 208
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/207 (86%), Positives = 193/207 (93%), Gaps = 1/207 (0%)
Query: 35 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLV 94
+IASEGLKHRVFEVSL DL +EEHAYRKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV
Sbjct: 3 QIASEGLKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLV 62
Query: 95 RKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVA 154
RKWHTLIEA+VDVKTTDN+TLR+FCIGFTKR PNQVKRTCYAQ+SQIRQIRRKMREIMV
Sbjct: 63 RKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVN 122
Query: 155 QAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
QA SCDLK LV KFI E IG++IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD
Sbjct: 123 QATSCDLKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 182
Query: 215 YSEDVGVKVDRPADEPIPEAPTEVIGA 241
YSEDVGVKVDRPA+E + E TEV+GA
Sbjct: 183 YSEDVGVKVDRPAEEAV-EGATEVVGA 208
>gi|413956680|gb|AFW89329.1| hypothetical protein ZEAMMB73_166147 [Zea mays]
Length = 231
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/219 (79%), Positives = 193/219 (88%), Gaps = 2/219 (0%)
Query: 17 CFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNV 76
C GKTLV+RTQGT+IASEGLKHRVFEV L DL +E+ AYRKIRLRAEDVQG+NV
Sbjct: 8 CSVCATSGKTLVSRTQGTRIASEGLKHRVFEVCLADLQGDEDQAYRKIRLRAEDVQGRNV 67
Query: 77 LTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYA 136
LTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIGFTKR PNQVKRTCYA
Sbjct: 68 LTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYA 127
Query: 137 QTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVK 196
Q SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+TSSI+PLQNVFIRKVK
Sbjct: 128 QASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVK 187
Query: 197 ILKAPKFDLGKLMEVHGDYSEDVGVKVDRP--ADEPIPE 233
ILKAPKFDLGKLMEVHGDY EDVGVK++RP DE + E
Sbjct: 188 ILKAPKFDLGKLMEVHGDYKEDVGVKLERPVEGDEAVQE 226
>gi|302835147|ref|XP_002949135.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300265437|gb|EFJ49628.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 257
Score = 362 bits (929), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 170/225 (75%), Positives = 193/225 (85%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DPFAKKDWYDIKAP+ F VRNVGKTLVTRTQGTKIASE LK RVFEVSL DL E+ A
Sbjct: 21 SDPFAKKDWYDIKAPTVFTVRNVGKTLVTRTQGTKIASEALKGRVFEVSLADLQKNEDDA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK+RLR EDVQG+N LTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTD +TLR+FCI
Sbjct: 81 FRKMRLRVEDVQGRNCLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDGYTLRVFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ Q+KRTCYAQ++QIRQIR+KM EI+ +A SCDLK LV KFI E IG++IEK+
Sbjct: 141 SFTKKRQGQIKRTCYAQSAQIRQIRKKMTEIITREATSCDLKDLVAKFIPEAIGKDIEKS 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR 225
IYPLQN FIRKVK+LKAPKFD+ KLMEVHGDYSE+VG K+DR
Sbjct: 201 CQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGTKLDR 245
>gi|159471131|ref|XP_001693710.1| ribosomal protein S3a, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|269969596|sp|A8HS48.1|RS3A_CHLRE RecName: Full=40S ribosomal protein S3a
gi|158283213|gb|EDP08964.1| ribosomal protein S3a [Chlamydomonas reinhardtii]
Length = 259
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/225 (75%), Positives = 193/225 (85%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DPFAKKDWYDIKAP+ F VRNVGKTLVTRTQGTKIASE LK RVFEVSL DL E+ A
Sbjct: 21 SDPFAKKDWYDIKAPTMFTVRNVGKTLVTRTQGTKIASEALKGRVFEVSLADLQKNEDDA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK+RLR EDVQG+N LTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTD +TLR+FCI
Sbjct: 81 FRKMRLRVEDVQGRNCLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDGYTLRVFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ Q+KRTCYAQ++QIRQIR+KM EI+ +A SCDLK LV KFI E IG++IEK+
Sbjct: 141 SFTKKRQGQIKRTCYAQSAQIRQIRKKMMEIITREATSCDLKELVAKFIPESIGKDIEKS 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR 225
IYPLQN FIRKVK+LKAPKFD+ KLMEVHGDYSE+VG K++R
Sbjct: 201 CQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGAKIER 245
>gi|384252598|gb|EIE26074.1| ribosomal protein S3Ae [Coccomyxa subellipsoidea C-169]
Length = 259
Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 173/236 (73%), Positives = 195/236 (82%), Gaps = 2/236 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAPS F RNVGKTLVTRTQGTKIAS+GLK RVFEVSL DL E A+
Sbjct: 22 DPFSKKDWYDVKAPSSFTSRNVGKTLVTRTQGTKIASDGLKGRVFEVSLADLQTNEADAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLR EDVQG+N LTNFWGM +TTDKLRSLVRKW TLIEA VDVKTTD + LR+F I
Sbjct: 82 RKIRLRVEDVQGRNCLTNFWGMDYTTDKLRSLVRKWQTLIEAQVDVKTTDGYLLRMFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ QVK+T YAQ+SQIRQIR+KM EIM +A+SCDLK LV KFI E IG+EIEKAT
Sbjct: 142 FTKKRTGQVKKTAYAQSSQIRQIRKKMVEIMTREASSCDLKELVGKFIPEAIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV-DRPADEPIPEAPT 236
IYPLQN IRKVKIL+APKFDL KL+EVHGDYSE+ G K+ ++PA+E IP A T
Sbjct: 202 QGIYPLQNTAIRKVKILRAPKFDLTKLLEVHGDYSEEAGAKIAEKPAEE-IPGAAT 256
>gi|168043632|ref|XP_001774288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674415|gb|EDQ60924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 254
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/243 (70%), Positives = 197/243 (81%), Gaps = 20/243 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F +++GKTLVTRT GTKIAS+GL+ RVFE + A+
Sbjct: 22 DPFSKKDWYDIKAPNTFPQKSLGKTLVTRTAGTKIASDGLRGRVFE----------DQAF 71
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIEA+VDVKTTDN+ LR+FCI
Sbjct: 72 RKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIEAHVDVKTTDNYQLRIFCIA 131
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
TK+ PNQ+K+TCYAQ+SQIRQIRRKMREIM +A +CDLK LV KFI EVIG+EIEKAT
Sbjct: 132 STKKRPNQIKKTCYAQSSQIRQIRRKMREIMTREAQTCDLKDLVSKFIPEVIGKEIEKAT 191
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP----------ADEPI 231
IYPLQN FIRKVKILKAPKFDL KLMEVHGDYSE+VG K++RP A EP+
Sbjct: 192 QGIYPLQNTFIRKVKILKAPKFDLMKLMEVHGDYSEEVGSKIERPVGDVAETDAGAAEPV 251
Query: 232 PEA 234
P A
Sbjct: 252 PSA 254
>gi|168026778|ref|XP_001765908.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682814|gb|EDQ69229.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 164/209 (78%), Positives = 185/209 (88%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP+ F +++GKTLVTRT GTKIAS+GLK RVFEVSL DL N+E+ A+
Sbjct: 22 DPFSKKDWYDIKAPNTFTQKSLGKTLVTRTAGTKIASDGLKGRVFEVSLADLQNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM TTDKLRSLVRKW +LIE++VDVKTTDN+ LR+FCI
Sbjct: 82 RKIKLRAEDVQGKNVLTNFWGMDLTTDKLRSLVRKWQSLIESHVDVKTTDNYMLRIFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+TCYAQ+SQIRQIRRKMREIM +A SCDLK LV KFI EVIG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTCYAQSSQIRQIRRKMREIMTREAQSCDLKELVAKFIPEVIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLME 210
IYPLQN FIRKVKILKAPKFDL KLME
Sbjct: 202 QGIYPLQNTFIRKVKILKAPKFDLMKLME 230
>gi|32401367|gb|AAP80855.1| cyc07 [Triticum aestivum]
Length = 242
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 181/215 (84%), Gaps = 1/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK WYDIKAP F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AY
Sbjct: 22 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG NVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTDN+ LR+F IG
Sbjct: 82 RKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIMV QAASCDL LV KFI EVIG+EIE AT
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLXELVNKFIPEVIGKEIEXAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFD-LGKLMEVHGDY 215
S I PLQNV++RKVKI + P+ G EVHGDY
Sbjct: 202 SGIXPLQNVYVRKVKIPEGPQVSTWGSFXEVHGDY 236
>gi|242036263|ref|XP_002465526.1| hypothetical protein SORBIDRAFT_01g040570 [Sorghum bicolor]
gi|241919380|gb|EER92524.1| hypothetical protein SORBIDRAFT_01g040570 [Sorghum bicolor]
Length = 254
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/234 (74%), Positives = 189/234 (80%), Gaps = 21/234 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQG-------TKIASEGLKHRVFEVSLGDLL 54
DPF+KKDWYDIKAPS F VRN+GKT V T IASEGLKHRVFEV L DL
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTSVQDTGCYSISNFIQNIASEGLKHRVFEVCLADLQ 81
Query: 55 NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFT 114
+E+ AYRKIRLRAEDVQG+NVLTNFWGMSFTTDKLRSLV+KW TLIEA+VDVKTTDN+
Sbjct: 82 GDEDQAYRKIRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYM 141
Query: 115 LRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIG 174
LRLFCIGFTKR PN QIRRKM +IMV QA+SCDLK LV KFI EVIG
Sbjct: 142 LRLFCIGFTKRRPN--------------QIRRKMVDIMVNQASSCDLKELVSKFIPEVIG 187
Query: 175 REIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAD 228
+EIEKATSSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVGVK++RP +
Sbjct: 188 KEIEKATSSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLERPVE 241
>gi|145356290|ref|XP_001422366.1| Ribosomal protein S3a, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|269969593|sp|A4SAD2.1|RS3A_OSTLU RecName: Full=40S ribosomal protein S3a
gi|144582608|gb|ABP00683.1| Ribosomal protein S3a, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 260
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 193/226 (85%), Gaps = 1/226 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYDIKAPS F VRN+GKTLV+RTQGTKIAS+GLK R+FE+SL DL N+E+ ++
Sbjct: 22 DPFTKKDWYDIKAPSMFSVRNIGKTLVSRTQGTKIASDGLKGRIFEISLADLNNDEDQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++L+ EDVQGKNVLTNF GM FTTDK+RSLVRKW +LIE +VDVKTTD +TLR+FCIG
Sbjct: 82 RKMKLKCEDVQGKNVLTNFAGMDFTTDKIRSLVRKWFSLIECFVDVKTTDGYTLRVFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR +Q KRTCYAQ++QIR+IR KM EI+ + +CDLK LV KFI EVIG+EIEK+
Sbjct: 142 FTKRRMDQAKRTCYAQSAQIRKIRAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRP 226
+ IYPLQNV+IRKVKILKAPKFDL KLMEVHGDYS E VG V RP
Sbjct: 202 AGIYPLQNVYIRKVKILKAPKFDLTKLMEVHGDYSGEAVGEAVARP 247
>gi|413956684|gb|AFW89333.1| hypothetical protein ZEAMMB73_166147 [Zea mays]
Length = 313
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 185/212 (87%), Gaps = 3/212 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IASEGLKHRVFEV L DL +E+ AY
Sbjct: 92 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEGLKHRVFEVCLADLQGDEDQAY 151
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 152 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 211
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+T
Sbjct: 212 FTKRRPNQVKRTCYAQASQIRQIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKST 271
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 213
SSI+PLQNVFIRK + + P+ + E HG
Sbjct: 272 SSIFPLQNVFIRKGEDTQGPQV---RSWETHG 300
>gi|407369311|emb|CBX25071.1| 40S ribosomal protein S3a [Polytomella sp. Pringsheim 198.80]
Length = 262
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/239 (67%), Positives = 190/239 (79%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKKDWYD+KAP F VRNVGKTLVTRTQGTKIASEGLK RVFEVSL DL EE A+
Sbjct: 22 DAFAKKDWYDLKAPGFFSVRNVGKTLVTRTQGTKIASEGLKGRVFEVSLADLQKNEEDAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+KIRLR EDVQG+N LTNF+GM FTTDKLR L+RKW +LIEA+VDVKTTD ++LR+FCI
Sbjct: 82 KKIRLRVEDVQGRNCLTNFYGMDFTTDKLRFLIRKWQSLIEAHVDVKTTDGYSLRMFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ Q+KRTCYAQT QIR IR+KM EIM +A+SC++K LV K I E IG++IEKA
Sbjct: 142 FTKKRQGQIKRTCYAQTGQIRSIRKKMVEIMAREASSCEVKELVAKLIPEAIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
I+P+ NVF+RKVK+LK PKFD KLMEVHGDY+ +VG KV+R E E ++G
Sbjct: 202 QGIFPITNVFVRKVKVLKTPKFDHAKLMEVHGDYTAEVGTKVERVLIEEAEEKEGPIVG 260
>gi|255085656|ref|XP_002505259.1| predicted protein [Micromonas sp. RCC299]
gi|226520528|gb|ACO66517.1| predicted protein [Micromonas sp. RCC299]
Length = 263
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/243 (69%), Positives = 195/243 (80%), Gaps = 4/243 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYDIKAPS F V+ VGKTLVTR+ GTKIAS+GLK R+FE SL DL +E+ A+
Sbjct: 22 DPFLKKEWYDIKAPSMFTVKQVGKTLVTRSAGTKIASDGLKGRIFECSLADLQQDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+ L+ EDVQG NVLT F GM FTTDKLRSLVRKW +LIE +VDVKTTD +TLR+FCIG
Sbjct: 82 RKMLLKCEDVQGTNVLTQFAGMDFTTDKLRSLVRKWFSLIETFVDVKTTDQYTLRVFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR +Q KRTCYAQ+ QIRQIR+KM EI+ + +SCDLK V KFI EVIG+EIEK
Sbjct: 142 FTKRRMDQTKRTCYAQSGQIRQIRKKMNEIINREISSCDLKESVLKFIPEVIGKEIEKVC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPAD--EPIPEAPTEV 238
+ IYPLQNV+IRKVKILK PKFD+ KLMEVHGDY+ ED G KVDRP D E + E EV
Sbjct: 202 AGIYPLQNVYIRKVKILKRPKFDVTKLMEVHGDYAGEDAGAKVDRPKDLIEKV-EKRDEV 260
Query: 239 IGA 241
+GA
Sbjct: 261 VGA 263
>gi|298204890|emb|CBI34197.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/211 (79%), Positives = 177/211 (83%), Gaps = 19/211 (9%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL N+E+HA
Sbjct: 21 ADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW TLIEA+VD +
Sbjct: 81 YRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDRQ------------ 128
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
NQ K+T YAQ+SQIRQIRRKMREIM QAASCDLK LV KFI E+IGREIEKA
Sbjct: 129 -------NQNKKTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKA 181
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEV 211
TSSIYPLQNVFIRKVKILKAPKFDLGKLME
Sbjct: 182 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEA 212
>gi|74662332|sp|Q764D2.1|RS3A_LENED RecName: Full=40S ribosomal protein S1; AltName: Full=Protein cyc07
gi|44885669|dbj|BAD11816.1| putative S-phase specific ribosomal protein cyc07 [Lentinula
edodes]
Length = 256
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 155/229 (67%), Positives = 190/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F VRNVGKTLV R+QG K A++ LK R+ EVSLGDL EEE ++
Sbjct: 22 DPFSRKDWYDIKAPSIFDVRNVGKTLVNRSQGLKNANDSLKGRIIEVSLGDLNKEEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA+
Sbjct: 142 FTKRRPTQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAS 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++RK KILKAPKFD+ KLME+HG+ +++ G K+ + EP
Sbjct: 202 RSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250
>gi|412992254|emb|CCO19967.1| predicted protein [Bathycoccus prasinos]
Length = 267
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/225 (71%), Positives = 190/225 (84%), Gaps = 1/225 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRNVGKT TRTQGTKIAS+GLK R+FE SL DL +E+ A+
Sbjct: 30 DPFSKKDWYDIKAPSMFTVRNVGKTPQTRTQGTKIASDGLKGRIFECSLADLNQDEDQAF 89
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+ L+ EDVQGKNVLTNF+GM FTTDK+RSLVRKW +LIE +VDVKTTD +T+R+FCIG
Sbjct: 90 RKMFLKCEDVQGKNVLTNFYGMDFTTDKIRSLVRKWFSLIECFVDVKTTDGYTMRVFCIG 149
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR +Q KRTCYAQ++QIR+IR KM EI+ + SCDLK LV KFI EVIG+EIEK+
Sbjct: 150 FTKRRVDQTKRTCYAQSAQIRKIRAKMVEIIKRECESCDLKELVLKFIPEVIGKEIEKSC 209
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDR 225
S IYPLQNV++RKVK+LK PKFD+ KLMEVHGDYS E+VG ++ R
Sbjct: 210 SGIYPLQNVYLRKVKMLKTPKFDVTKLMEVHGDYSGEEVGQQIPR 254
>gi|449550113|gb|EMD41078.1| hypothetical protein CERSUDRAFT_80722 [Ceriporiopsis subvermispora
B]
Length = 256
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 154/229 (67%), Positives = 190/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F RNVGKTLV R+QG K A++ LK R+ E+SL DL N+EE A+
Sbjct: 22 DPFSRKDWYDIKAPSIFERRNVGKTLVNRSQGLKNANDSLKGRIVEISLADLNNDEEQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR +++QGKN LTNF GM+FT+DKLRSLVRKW TLIEA+VDVKTTD + +RLF IG
Sbjct: 82 RKIKLRVDEIQGKNCLTNFHGMAFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLIRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QV++T YAQ+SQIR+IR+KM EIM +A+SCDLK LV+KF+ E IGREIEKAT
Sbjct: 142 FTKRRPQQVRKTTYAQSSQIREIRKKMFEIMTREASSCDLKELVQKFVPEAIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV+I K KILKAPKFDL KL+E+HG+ +++ G +V + EP
Sbjct: 202 RSIYPLQNVYIHKAKILKAPKFDLSKLLELHGESTDETGTRVAKEFKEP 250
>gi|390601309|gb|EIN10703.1| S-phase-specific ribosomal protein cyc07 [Punctularia
strigosozonata HHB-11173 SS5]
Length = 256
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/229 (67%), Positives = 191/229 (83%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F V+NVGKTLV R+QG K A++ LK R+ E+SLGDL +EE A+
Sbjct: 22 DPFSRKDWYDIKAPSIFEVKNVGKTLVNRSQGLKNANDSLKGRIIELSLGDLNKDEEQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRIDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYILRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QVK+T YAQ++QIR+IR+KM EIM +A+SCDLK LV+KF+ E IGREIEKAT
Sbjct: 142 FTKRRPTQVKKTTYAQSAQIREIRKKMFEIMTREASSCDLKELVQKFVPEAIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV+IRK KI+KAPKFD+ KL+E+HG+ +++ G ++ + EP
Sbjct: 202 RSIYPLQNVYIRKAKIIKAPKFDVSKLLELHGETTDETGTRIIKDFKEP 250
>gi|409050160|gb|EKM59637.1| hypothetical protein PHACADRAFT_250267 [Phanerochaete carnosa
HHB-10118-sp]
Length = 256
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 154/229 (67%), Positives = 189/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F V+NVGKTLV R+QG K A++ LK R+ EVSL DL +EE A+
Sbjct: 22 DPFSRKDWYDIKAPSIFEVKNVGKTLVNRSQGLKNANDSLKGRIIEVSLADLNKDEEQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GMSFT+DKLRSLVRKW TLIEA+VDVKTTD + +RLF IG
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMSFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLIRLFTIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV++T YAQ+SQIR+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRRPNQVRKTTYAQSSQIREIRKKMFEIMTREATSCDLKELVQKFVPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++ K KILKAP+FDL KL+E+HG+ +++ G +V + EP
Sbjct: 202 RSIYPLQNVYVHKAKILKAPRFDLSKLLELHGESTDETGTRVVKDFKEP 250
>gi|409079996|gb|EKM80357.1| hypothetical protein AGABI1DRAFT_106559 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 256
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 153/232 (65%), Positives = 191/232 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAPS F VRNVGKTLV ++ G K A++ L+ RV EVSLGDL +EE ++
Sbjct: 22 DPFTRKDWYDIKAPSIFEVRNVGKTLVNKSVGLKNANDSLRGRVIEVSLGDLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR +++QGKN LTNF GM FT+DKLRSLVRKW TLIEA++DVKTTD + LRLF IG
Sbjct: 82 RKIKLRVDEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHIDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P+QVK+T YAQTSQ+R+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKA+
Sbjct: 142 FTKRRPSQVKKTTYAQTSQVREIRKKMFEIMSREATSCDLKELVQKFVPEAIGREIEKAS 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPE 233
SIYPLQNV+IRK KILK+PKFD+ KL+E+HG+ +++ G +V + EP P+
Sbjct: 202 RSIYPLQNVYIRKAKILKSPKFDVSKLLELHGESTDETGTRVVKEFKEPAPQ 253
>gi|336373473|gb|EGO01811.1| hypothetical protein SERLA73DRAFT_120459 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386296|gb|EGO27442.1| hypothetical protein SERLADRAFT_382295 [Serpula lacrymans var.
lacrymans S7.9]
Length = 256
Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 153/229 (66%), Positives = 189/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAPS F VRNVGKTLV R+QG K A++ LK R+ EVSL DL +EE +Y
Sbjct: 22 DPFSRKEWYDIKAPSIFEVRNVGKTLVNRSQGLKNANDSLKGRIVEVSLADLNKDEEQSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW +LIEA+VDVKTTD + +RLF IG
Sbjct: 82 RKIKLRIDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEAHVDVKTTDGYLIRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV++T YAQTSQIR+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRRPNQVRKTTYAQTSQIREIRKKMFEIMTREATSCDLKELVQKFVPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++RK KILKAPKFD+ KL+E+HG+ +++ G ++ + EP
Sbjct: 202 RSIYPLQNVYVRKAKILKAPKFDVSKLLELHGESTDETGTRIVKDFKEP 250
>gi|403418169|emb|CCM04869.1| predicted protein [Fibroporia radiculosa]
Length = 256
Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/229 (67%), Positives = 187/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAPS F RNVGKTLV R+QG K A++ LK R+ EVSL DL N+EE A+
Sbjct: 22 DPFTRKDWYDIKAPSIFEKRNVGKTLVNRSQGLKNANDSLKGRIIEVSLADLNNDEEQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF GMSF++DKLRSLVRKW TLIEA+VDVKTTD + +RLF IG
Sbjct: 82 RKMKLRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTTDGYLIRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QV++T YAQTSQIR+IRRKM EIM +A+SCDLK LV+KFI E IGREIEKA
Sbjct: 142 FTKRRPTQVRKTTYAQTSQIREIRRKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
IYPLQNVF+ K KILKAPKFD+ KL+E+HG+ +++ G +V + EP
Sbjct: 202 RGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250
>gi|242219372|ref|XP_002475466.1| 40S ribosomal protein S3A [Postia placenta Mad-698-R]
gi|269969606|sp|B8PIG4.1|RS3A_POSPM RecName: Full=40S ribosomal protein S1
gi|220725325|gb|EED79317.1| 40S ribosomal protein S3A [Postia placenta Mad-698-R]
Length = 256
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/229 (67%), Positives = 186/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAPS F RNVGKTLV R+ G K A++ LK R+ E+SL DL N+EE A+
Sbjct: 22 DPFTRKDWYDIKAPSIFEKRNVGKTLVNRSSGLKNANDSLKGRIVEISLADLNNDEEQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GMSF++DKLRSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QV++T YAQ+SQIRQIR+KM EIM +A+SCDLK LV+KFI E IGREIEKA
Sbjct: 142 FTKRRPTQVRKTTYAQSSQIRQIRQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
IYPLQNVF+ K KILKAPKFD+ KL+E+HG+ +++ G +V + EP
Sbjct: 202 RGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250
>gi|269969637|sp|B0CY45.2|RS3A_LACBS RecName: Full=40S ribosomal protein S1
Length = 256
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 148/229 (64%), Positives = 188/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F VRNVGKTL R+QG K A++ LK R+ EVSL DL +EE ++
Sbjct: 22 DPFSRKDWYDIKAPSIFEVRNVGKTLANRSQGLKNANDSLKGRIIEVSLADLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR +++QGKN LTNF GM FT+DKLRSLVRKW TL+EA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRIDEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P+QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRRPSQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++RK KILK+PKFD+ KL+E+HGD +++ G ++ + EP
Sbjct: 202 RSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 250
>gi|302696691|ref|XP_003038024.1| 40S ribosomal protein S1 [Schizophyllum commune H4-8]
gi|300111721|gb|EFJ03122.1| hypothetical protein SCHCODRAFT_72059 [Schizophyllum commune H4-8]
Length = 256
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 151/229 (65%), Positives = 187/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP +K+WYDIKAPS F VRNVGKT+V R+QG K A++ LK R+ EVSL DL +EE ++
Sbjct: 22 DPLTRKEWYDIKAPSIFEVRNVGKTIVNRSQGLKNANDSLKGRIVEVSLADLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QV++T YAQ+SQ+R+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKA+
Sbjct: 142 FTKRRPTQVRKTTYAQSSQVREIRKKMFEIMTREATSCDLKELVQKFVPEAIGREIEKAS 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++RK KILKAPKFD+ KLME+HG+ +++ G K+ + EP
Sbjct: 202 RSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250
>gi|392568565|gb|EIW61739.1| 40S ribosomal protein S1 [Trametes versicolor FP-101664 SS1]
Length = 256
Score = 325 bits (834), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 151/229 (65%), Positives = 187/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F V+NVGKTL R+QG K A++ LK R+ EVSL DL +EE A+
Sbjct: 22 DPFSRKDWYDIKAPSIFEVKNVGKTLANRSQGLKNANDSLKGRIVEVSLADLNKDEEQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR +++QGK+ LTNF GMSFT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVDEIQGKSCLTNFHGMSFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QV++T YAQ+SQIR+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRRPTQVRKTTYAQSSQIREIRKKMFEIMTREATSCDLKELVQKFVPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV+I K KI+KAPKFD+ KL+E+HG+ +++ G +V + EP
Sbjct: 202 RSIYPLQNVYIHKAKIIKAPKFDMSKLLELHGESTDETGTRVAKDFKEP 250
>gi|392593057|gb|EIW82383.1| ribosomal protein S3Ae [Coniophora puteana RWD-64-598 SS2]
Length = 256
Score = 325 bits (833), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 150/229 (65%), Positives = 189/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYD+KAPS F VRNVGKTLV R+QG K A++ LK R+ EVSL DL +EE ++
Sbjct: 22 DPFSRKEWYDVKAPSTFEVRNVGKTLVNRSQGLKNANDSLKGRIIEVSLADLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW +LIEA+VDVKTTD + +RLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEAHVDVKTTDGYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV++T YAQ+SQIR+IR+KM EIM +A+SCDLK LV+KF+ E IGREIEK T
Sbjct: 142 FTKRRPNQVRKTTYAQSSQIREIRKKMFEIMTREASSCDLKELVQKFVPEAIGREIEKNT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
+IYPLQNV+IRK KILKAPKFD+ KL+E+HG+ +++ G +V + EP
Sbjct: 202 RNIYPLQNVYIRKAKILKAPKFDVSKLLELHGESTDETGTRVVKDFKEP 250
>gi|91940160|gb|ABE66401.1| S phase protein [Striga asiatica]
Length = 190
Score = 325 bits (833), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 174/191 (91%), Gaps = 1/191 (0%)
Query: 34 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSL 93
TKIASEGLKHRVFEVSL DL +E+H++RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSL
Sbjct: 1 TKIASEGLKHRVFEVSLADLQGDEDHSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSL 60
Query: 94 VRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMV 153
VRKW +LIEA+VDVKTTDN+TLRLFCI FTK+ NQ KRTCYAQ+SQIRQIRRKMREIMV
Sbjct: 61 VRKWQSLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQQKRTCYAQSSQIRQIRRKMREIMV 120
Query: 154 AQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 213
QA SCDLK LV+KF+ E IG+EIEKAT SIYPLQNV+IRKVKILKAPKFDL +LMEVHG
Sbjct: 121 NQAQSCDLKDLVQKFVPESIGKEIEKATQSIYPLQNVYIRKVKILKAPKFDLSRLMEVHG 180
Query: 214 DYSEDVGVKVD 224
D+ E++GVK++
Sbjct: 181 DH-EEIGVKLE 190
>gi|170091738|ref|XP_001877091.1| 40S ribosomal protein S1 [Laccaria bicolor S238N-H82]
gi|164648584|gb|EDR12827.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 273
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 148/229 (64%), Positives = 188/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F VRNVGKTL R+QG K A++ LK R+ EVSL DL +EE ++
Sbjct: 39 DPFSRKDWYDIKAPSIFEVRNVGKTLANRSQGLKNANDSLKGRIIEVSLADLNKDEEQSF 98
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR +++QGKN LTNF GM FT+DKLRSLVRKW TL+EA+VDVKTTD + LRLF IG
Sbjct: 99 RKIKLRIDEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIG 158
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P+QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA
Sbjct: 159 FTKRRPSQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAA 218
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++RK KILK+PKFD+ KL+E+HGD +++ G ++ + EP
Sbjct: 219 RSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 267
>gi|169860935|ref|XP_001837102.1| 40S ribosomal protein S1 [Coprinopsis cinerea okayama7#130]
gi|269969598|sp|A8NX92.1|RS3A_COPC7 RecName: Full=40S ribosomal protein S1
gi|116501824|gb|EAU84719.1| 40s ribosomal protein s3ae-a [Coprinopsis cinerea okayama7#130]
Length = 256
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 187/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAPS F RNVGKTLV R+QG K A++ L+ R+ EVSL DL +EE ++
Sbjct: 22 DPFTRKDWYDIKAPSIFETRNVGKTLVNRSQGLKNANDSLRGRIIEVSLADLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR +++QG+N LTNF GM FT+DKLRSLVRKW TL+EA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVDEIQGRNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QVK+T YAQT+Q+R++R+KM EI+ +A SCDLK LV+KF+ E IGREIEKA+
Sbjct: 142 FTKRRPTQVKKTTYAQTAQVRELRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKAS 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV+IRK KILKAPKFD+ KL+E+HGD +++ G +V + EP
Sbjct: 202 RSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDESGTRVTKDFKEP 250
>gi|303282133|ref|XP_003060358.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457829|gb|EEH55127.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 257
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 184/225 (81%), Gaps = 1/225 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY+IKAPS F V+ VGKTLVTR+ GTKIAS+GLK R+FEVSL DL +E+ A+
Sbjct: 22 DPFLKKEWYNIKAPSMFSVKQVGKTLVTRSAGTKIASDGLKGRIFEVSLADLNQDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+ L+ EDVQG NVLT F GM FTTDK+RSLVRKW +LIE Y DVKTTD + LR+FCIG
Sbjct: 82 RKMLLKCEDVQGTNVLTQFHGMDFTTDKIRSLVRKWFSLIECYADVKTTDGYRLRVFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR +Q KRTCYAQ+ QIRQIR+KM EI+ + +CDLK V KFI EVIG+EIEK
Sbjct: 142 FTKRRMDQTKRTCYAQSGQIRQIRKKMVEIISRETTTCDLKECVLKFIPEVIGKEIEKVC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDR 225
+ IYPLQNV+IRKVKIL APKFD+ KLMEVHGDY SE+VG KV+R
Sbjct: 202 AGIYPLQNVYIRKVKILGAPKFDVTKLMEVHGDYTSEEVGAKVER 246
>gi|393215843|gb|EJD01334.1| 40S ribosomal protein S1 [Fomitiporia mediterranea MF3/22]
Length = 256
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/229 (65%), Positives = 186/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY+IKAPS F VR+VGKTL R+QG K A++ L+ R+ EVSL DL +EE A+
Sbjct: 22 DPFSRKDWYNIKAPSLFEVRDVGKTLANRSQGLKNANDSLRGRIVEVSLADLAKDEEQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR +++QGKN LTNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF I
Sbjct: 82 RKIKLRIDEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QVK+T YAQT+QIR+IR+KM EIM +A+SCDLK LV KFI E IGREIEKAT
Sbjct: 142 FTKRRPTQVKKTTYAQTAQIREIRKKMFEIMTREASSCDLKELVLKFIPEAIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
IYPLQNV++RK KI+KAPKFD+ KLME+HG+ +++ G +V + EP
Sbjct: 202 RKIYPLQNVYVRKAKIIKAPKFDVSKLMELHGESTDETGTRVAKEFKEP 250
>gi|395330612|gb|EJF62995.1| 40S ribosomal protein S1 [Dichomitus squalens LYAD-421 SS1]
Length = 256
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 150/229 (65%), Positives = 188/229 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYD+KAPS F V+NVGKTLV R+QG K A++ LK R+ EVSL DL +EE ++
Sbjct: 22 DPFSRKDWYDLKAPSIFEVKNVGKTLVNRSQGLKNANDSLKGRIIEVSLADLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GMSFT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMSFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P+QV++T YAQ+SQIR+IR+KM EI+ +A S DLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRRPSQVRKTTYAQSSQIREIRKKMFEIITREATSVDLKELVQKFVPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++ K KILKAPKFD+ KL+E+HG+ +++ G +V + EP
Sbjct: 202 RSIYPLQNVYVHKAKILKAPKFDVSKLLELHGESTDETGTRVVKDFKEP 250
>gi|393246319|gb|EJD53828.1| 40S ribosomal protein S1 [Auricularia delicata TFB-10046 SS5]
Length = 256
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/229 (65%), Positives = 187/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F V+N+G+TLV R+QG K A++ LK RV EVSLGDL ++E+ A+
Sbjct: 22 DPFSRKDWYDIKAPSTFEVKNIGRTLVNRSQGLKNANDSLKGRVIEVSLGDLNSDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + +RLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV++T YAQ++QIR+IR+KM EIM +A+S DLK L +KF E IGREIEKA
Sbjct: 142 FTKRRPNQVRKTTYAQSAQIREIRKKMFEIMQREASSVDLKELTQKFAPEAIGREIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
IYPLQNV+IRK KILKAPKFD+ KL+E+HGD +++ G +V + EP
Sbjct: 202 KGIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDETGTRVGKDFKEP 250
>gi|389747095|gb|EIM88274.1| S-phase-specific ribosomal protein cyc07 [Stereum hirsutum FP-91666
SS1]
Length = 256
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 186/229 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F V+NVGKTLV R+ G K A++ LK R+ E SLGDL +EE ++
Sbjct: 22 DPFSRKDWYDIKAPSMFEVKNVGKTLVNRSSGLKNANDSLKGRIVEFSLGDLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +DVQG+N LTNF GMSFT+DKLRSLVRKW TLIEA+VDV+TTD + LRLF IG
Sbjct: 82 RKVKLRIDDVQGRNCLTNFHGMSFTSDKLRSLVRKWQTLIEAHVDVRTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR QV++T YAQ++QIR+IR+KM EIM +A+SCDLK LV KF+ E IGREIEKA
Sbjct: 142 FTKRRQTQVRKTTYAQSAQIREIRKKMFEIMTREASSCDLKELVLKFVPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
SIYPLQNV++ K KILKAPKFD+ KLME+HG+ +++ G +V + EP
Sbjct: 202 RSIYPLQNVYVHKAKILKAPKFDVSKLMELHGEVTDETGTRVAKDFKEP 250
>gi|353235196|emb|CCA67212.1| probable ribosomal protein 10, cytosolic [Piriformospora indica DSM
11827]
Length = 256
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 147/233 (63%), Positives = 187/233 (80%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIK PS F V+N+GKTLV R+QG K AS+ LK R+ EVSL DL+ +EE +
Sbjct: 22 DPFSRKEWYDIKGPSFFEVKNIGKTLVNRSQGLKNASDSLKGRIIEVSLADLVKDEEQTF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW +LIEA+VDVKTTD + +RLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEAHVDVKTTDGYIVRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV +T YAQT+QIR+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRRPNQVSKTTYAQTAQIREIRKKMFEIMTREATSCDLKELVQKFVPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA 234
IYP+QNV+IRK KI+K+PKFD+ KL+E+HG+ +++ G K+ + EP +A
Sbjct: 202 RGIYPIQNVYIRKAKIVKSPKFDINKLLELHGEVTDETGTKIAKDYKEPEVQA 254
>gi|320167540|gb|EFW44439.1| ribosomal protein S3a [Capsaspora owczarzaki ATCC 30864]
Length = 262
Score = 319 bits (817), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/229 (67%), Positives = 185/229 (80%), Gaps = 4/229 (1%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLN-EEEH 59
ADP+AKKDWYDIKAPS F R VGKTLVTRT GTKIA++GLK RVFEVSL DL EE
Sbjct: 22 ADPYAKKDWYDIKAPSMFTTRQVGKTLVTRTTGTKIAADGLKGRVFEVSLADLQGGNEEE 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
A+RKI+L A++VQGKN+LTNF G+ FTTDKLRSLV+KWHTLIEA VDVKT+DN+ +R+F
Sbjct: 82 AHRKIKLCADEVQGKNLLTNFHGLDFTTDKLRSLVKKWHTLIEAIVDVKTSDNYVVRVFV 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTKR PNQVK+T YAQ +QIRQIR+KM +I+ + +S DLK V K + E IG+EIEK
Sbjct: 142 IAFTKRRPNQVKKTSYAQHAQIRQIRKKMTDIITKEVSSADLKEFVAKLLPESIGKEIEK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDR 225
A +YPLQNVF+RKVK+L+ PK D+GKL+E+HGD SED G KV+R
Sbjct: 202 ACQGVYPLQNVFVRKVKVLRKPKLDMGKLLELHGDSGASSEDTGAKVER 250
>gi|340959857|gb|EGS21038.1| hypothetical protein CTHT_0028780 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 255
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/233 (66%), Positives = 183/233 (78%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY+IKAP+ F VR+VGKTLV RT G K A++ LK R+FEV L DL +E+HA+
Sbjct: 22 DPFTRKDWYNIKAPAPFAVRDVGKTLVNRTTGLKNANDALKGRIFEVCLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FTTDKLRSLVRKW TLIEA V V TTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTTDKLRSLVRKWQTLIEANVTVTTTDHYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IRRKM EI+ +AASC L LV K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAQSSQIRAIRRKMVEIIQREAASCTLHQLVSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG LM +HG+ SE+ G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALMALHGESSEEAGQKVEREFREQVLES 254
>gi|426198238|gb|EKV48164.1| hypothetical protein AGABI2DRAFT_191800 [Agaricus bisporus var.
bisporus H97]
Length = 259
Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 185/225 (82%)
Query: 9 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRA 68
WYDIKAPS F VRNVGKTLV ++ G K A++ L+ RV EVSLGDL +EE ++RKI+LR
Sbjct: 32 WYDIKAPSIFEVRNVGKTLVNKSVGLKNANDSLRGRVIEVSLGDLNKDEEQSFRKIKLRV 91
Query: 69 EDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPN 128
+++QGKN LTNF GM FT+DKLRSLVRKW TLIEA++DVKTTD + LRLF IGFTKR P+
Sbjct: 92 DEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHIDVKTTDGYLLRLFAIGFTKRRPS 151
Query: 129 QVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQ 188
QVK+T YAQTSQ+R+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKA+ SIYPLQ
Sbjct: 152 QVKKTTYAQTSQVREIRKKMFEIMSREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQ 211
Query: 189 NVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPE 233
NV+IRK KILK+PKFD+ KL+E+HG+ +++ G +V + EP P+
Sbjct: 212 NVYIRKAKILKSPKFDVSKLLELHGESTDETGTRVVKEFKEPAPQ 256
>gi|189189988|ref|XP_001931333.1| 40S ribosomal protein S1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330944267|ref|XP_003306346.1| 40S ribosomal protein S1 [Pyrenophora teres f. teres 0-1]
gi|269969607|sp|B2VUE4.1|RS3A_PYRTR RecName: Full=40S ribosomal protein S1
gi|187972939|gb|EDU40438.1| 40S ribosomal protein S3aE-A [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311316196|gb|EFQ85579.1| hypothetical protein PTT_19476 [Pyrenophora teres f. teres 0-1]
Length = 255
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/233 (66%), Positives = 184/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKKDWY+IKAP F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 21 DTFAKKDWYNIKAPGTFAVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLFCI
Sbjct: 81 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVK+T YAQ+SQIR IR+KM EIM A+SC L L +K I EVIGREIEKAT
Sbjct: 141 FTKRRPNQVKKTTYAQSSQIRAIRKKMVEIMARDASSCTLAQLTQKLIPEVIGREIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPIPE 233
IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S+ D G KV+R E + E
Sbjct: 201 QGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSQDDSGQKVEREFKETVLE 253
>gi|451854407|gb|EMD67700.1| hypothetical protein COCSADRAFT_34493 [Cochliobolus sativus ND90Pr]
Length = 255
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/233 (65%), Positives = 184/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKKDWY+IKAP F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 21 DTFAKKDWYNIKAPGTFAVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLFCI
Sbjct: 81 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLIRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVK+T YAQ+SQIR IR+KM EIM A++C L L +K I EVIGREIEKAT
Sbjct: 141 FTKRRPNQVKKTTYAQSSQIRAIRKKMMEIMTRDASACTLAQLTQKLIPEVIGREIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPIPE 233
IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S+ D G KV+R E + E
Sbjct: 201 QGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSQDDSGQKVEREFKETVLE 253
>gi|451999486|gb|EMD91948.1| hypothetical protein COCHEDRAFT_1173335 [Cochliobolus
heterostrophus C5]
Length = 255
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/231 (65%), Positives = 183/231 (79%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKKDWY+IKAP F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 21 DTFAKKDWYNIKAPGTFAVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLFCI
Sbjct: 81 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLIRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVK+T YAQ+SQIR IR+KM EIM A++C L L +K I EVIGREIEKAT
Sbjct: 141 FTKRRPNQVKKTTYAQSSQIRAIRKKMMEIMTRDASACTLAQLTQKLIPEVIGREIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPI 231
IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S+ D G KV+R E +
Sbjct: 201 QGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSQDDSGQKVEREFKETV 251
>gi|121717536|ref|XP_001276080.1| 40S ribosomal protein S1 [Aspergillus clavatus NRRL 1]
gi|269969559|sp|A1C4N6.1|RS3A_ASPCL RecName: Full=40S ribosomal protein S1
gi|119404278|gb|EAW14654.1| 40S ribosomal protein S3Ae [Aspergillus clavatus NRRL 1]
Length = 256
Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 185/234 (79%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFTRKDEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
>gi|70998726|ref|XP_754085.1| 40S ribosomal protein S3Ae [Aspergillus fumigatus Af293]
gi|119498653|ref|XP_001266084.1| 40S ribosomal protein S1 [Neosartorya fischeri NRRL 181]
gi|74672873|sp|Q4WTM9.1|RS3A_ASPFU RecName: Full=40S ribosomal protein S1
gi|269969560|sp|B0Y356.1|RS3A_ASPFC RecName: Full=40S ribosomal protein S1
gi|269969591|sp|A1CZL7.1|RS3A_NEOFI RecName: Full=40S ribosomal protein S1
gi|66851721|gb|EAL92047.1| 40S ribosomal protein S3Ae [Aspergillus fumigatus Af293]
gi|119414248|gb|EAW24187.1| 40S ribosomal protein S3Ae [Neosartorya fischeri NRRL 181]
gi|159126181|gb|EDP51297.1| 40S ribosomal protein S3Ae [Aspergillus fumigatus A1163]
Length = 256
Score = 313 bits (801), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/234 (64%), Positives = 186/234 (79%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMIEIMQREAASCSLAQLTHKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255
>gi|169765315|ref|XP_001817129.1| 40S ribosomal protein S1 [Aspergillus oryzae RIB40]
gi|238503382|ref|XP_002382924.1| 40S ribosomal protein S1 [Aspergillus flavus NRRL3357]
gi|121806889|sp|Q2UTI8.1|RS3A_ASPOR RecName: Full=40S ribosomal protein S1
gi|269969561|sp|B8NSD4.1|RS3A_ASPFN RecName: Full=40S ribosomal protein S1
gi|83764983|dbj|BAE55127.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690395|gb|EED46744.1| 40S ribosomal protein S3Ae [Aspergillus flavus NRRL3357]
Length = 256
Score = 313 bits (801), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 186/234 (79%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCTLSQLTTKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255
>gi|115438592|ref|XP_001218106.1| 40S ribosomal protein S1 [Aspergillus terreus NIH2624]
gi|121733910|sp|Q0CA00.1|RS3A_ASPTN RecName: Full=40S ribosomal protein S1
gi|114188921|gb|EAU30621.1| 40S ribosomal protein S3aE [Aspergillus terreus NIH2624]
Length = 256
Score = 312 bits (799), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 149/234 (63%), Positives = 186/234 (79%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCSLAQLTTKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255
>gi|296417402|ref|XP_002838347.1| 40S ribosomal protein S1 [Tuber melanosporum Mel28]
gi|295634275|emb|CAZ82538.1| unnamed protein product [Tuber melanosporum]
Length = 256
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/234 (63%), Positives = 185/234 (79%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL +EEHA+
Sbjct: 22 DPFTRKDWYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEEHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGK+ LTNF G+ FT+DKLRSLVRKW TLIEA + VKTTD++ LRLF IG
Sbjct: 82 RKVKLRVDEVQGKSCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+K+T YAQTSQIR IR+KM EI+ +AASC L L +K I EVIGREIEKAT
Sbjct: 142 FTKKRQNQIKKTTYAQTSQIRAIRKKMVEIIQREAASCTLSQLTQKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPEA 234
+ IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ + D G KV+R E + E+
Sbjct: 202 TGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTADESGQKVEREFKETVLES 255
>gi|388581475|gb|EIM21783.1| 40S ribosomal protein S1, partial [Wallemia sebi CBS 633.66]
Length = 250
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/236 (62%), Positives = 186/236 (78%), Gaps = 5/236 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKK+WYD+KAPS F RN+GKT+V R+ G K A + LK RV E+SLGDL +E+ A+
Sbjct: 11 DAFAKKEWYDLKAPSVFETRNIGKTVVNRSAGLKNADDSLKGRVIELSLGDLNKDEDQAF 70
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++L+ + +QGKN LT+F+GM T+DKLRSLVRKW +LIE++VDV+TTD + +RLF I
Sbjct: 71 RKMKLKVDSIQGKNCLTSFYGMDMTSDKLRSLVRKWQSLIESHVDVRTTDGYLVRLFAIA 130
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR P QVK+T YA++SQIR+IR+KM EIM +A SCDLK LV+KF+ E IGREIEKAT
Sbjct: 131 FTKRRPQQVKKTTYAKSSQIREIRKKMFEIMTREAGSCDLKQLVQKFVPEAIGREIEKAT 190
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKVDRPAD--EPIP 232
+IYPLQNVFIRK KILK+PKF+LGKL+E HG +ED GVKV + D EP P
Sbjct: 191 RNIYPLQNVFIRKAKILKSPKFELGKLLEQHGGVQAATEDAGVKVAKGTDFVEPAP 246
>gi|406864946|gb|EKD17989.1| 40S ribosomal protein S3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 256
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/231 (64%), Positives = 182/231 (78%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 22 DPFTRKDWYQVKAPSSFQIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EI+V +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRKKMTEIIVREASSCTLTQLTAKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPI 231
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G KV+R E +
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGNLLNLHGESNTDESGQKVEREFKEKV 252
>gi|269969562|sp|A2R9S1.1|RS3A_ASPNC RecName: Full=40S ribosomal protein S1
gi|134084046|emb|CAL00584.1| unnamed protein product [Aspergillus niger]
gi|358373339|dbj|GAA89938.1| 40S ribosomal protein S3aE [Aspergillus kawachii IFO 4308]
Length = 256
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/234 (63%), Positives = 184/234 (78%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAPS F+ R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFTRKDEYSVKAPSTFQTRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCSLAQLTTKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255
>gi|164429338|ref|XP_955974.2| 40S ribosomal protein S1 [Neurospora crassa OR74A]
gi|74663575|sp|Q871N9.1|RS3A_NEUCR RecName: Full=40S ribosomal protein S1; AltName: Full=Cytoplasmic
ribosomal protein 8
gi|28950332|emb|CAD70957.1| probable ribosomal protein 10, cytosolic [Neurospora crassa]
gi|157073442|gb|EAA26738.2| 40S ribosomal protein S1 [Neurospora crassa OR74A]
gi|336472332|gb|EGO60492.1| hypothetical protein NEUTE1DRAFT_115750 [Neurospora tetrasperma
FGSC 2508]
gi|350294449|gb|EGZ75534.1| putative ribosomal protein 10, cytosolic [Neurospora tetrasperma
FGSC 2509]
Length = 256
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 183/234 (78%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+H++
Sbjct: 22 DPFARKDWYGIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FT+DKLRSLVRKW TLIEA + VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVK+T YA +SQIR IRRKM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQVKKTTYAASSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG LM +HG+ S++ G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALMSLHGESGSDEAGQKVEREFKETVLES 255
>gi|17369860|sp|Q9XEG7.3|RS3A_TORRU RecName: Full=40S ribosomal protein S3a
gi|4574210|gb|AAD23952.1|AF093109_1 ribosomal protein S3 [Syntrichia ruralis]
Length = 248
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 157/223 (70%), Positives = 180/223 (80%), Gaps = 4/223 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAP R RT GTKIAS+GL RVFEVSL DL N+E+ A+
Sbjct: 22 DPFSKKDWYDIKAPPR-SRRARSGRRCHRTAGTKIASDGLNFRVFEVSLADLQNDEDQAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQGKNVLTNFWGM FTTDKLRSLVRKW +LI+A+VDVKTTDN+ +R+FCI
Sbjct: 81 RKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PN R YAQ+SQI IRRKMREIMV +A +CDLK LV KFI EVIG+EI++
Sbjct: 141 FTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWR 198
Query: 182 S-SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
S IYPLQ+ FIRKVKILKAPKFDL KLMEVHGDY+E+VG K+
Sbjct: 199 SQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 241
>gi|158187820|gb|ABW23199.1| ribosomal protein rps3a [Eurythoe complanata]
Length = 263
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/240 (64%), Positives = 187/240 (77%), Gaps = 9/240 (3%)
Query: 3 PFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYR 62
PF K DWYD+KAPS F +R +GKTLVTRTQGTKIASEGLK RVFEVSL DL N+E A+R
Sbjct: 24 PFTKXDWYDVKAPSMFNIRQIGKTLVTRTQGTKIASEGLKGRVFEVSLADLQNDEV-AFR 82
Query: 63 KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGF 122
K +L AE+VQG+NVLTNF GM+ TTDKLRS+V+KW TLIEA VDV+TTD F LRLFCIGF
Sbjct: 83 KFKLVAEEVQGRNVLTNFHGMNLTTDKLRSMVKKWQTLIEANVDVRTTDAFLLRLFCIGF 142
Query: 123 TKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
TK+ NQ+K+TCYAQ +Q+R I +KM EIM + +S DLK +V K I + IG++IEKA
Sbjct: 143 TKKRQNQIKKTCYAQHTQVRAIXKKMVEIMSREVSSNDLKEVVNKLIPDSIGKDIEKACQ 202
Query: 183 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD------YSEDVGVKVDRPA--DEPIPEA 234
IYPL +V+IRKVKILK PKFDLGKLME+HG+ + + G KVDRP + P+ E+
Sbjct: 203 GIYPLHDVYIRKVKILKKPKFDLGKLMELHGEGGTTKTVTTEGGEKVDRPEGYEPPVMES 262
>gi|336269816|ref|XP_003349668.1| 40S ribosomal protein S1 [Sordaria macrospora k-hell]
gi|380088807|emb|CCC13242.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 256
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 149/234 (63%), Positives = 183/234 (78%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+H++
Sbjct: 22 DPFARKDWYGIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FT+DKLRSLVRKW TLIEA + VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG LM +HG+ S++ G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGSLMALHGESGSDEAGQKVEREFKETVLES 255
>gi|453083995|gb|EMF12040.1| 40S ribosomal protein S3aE-A [Mycosphaerella populorum SO2202]
Length = 257
Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/228 (64%), Positives = 182/228 (79%), Gaps = 1/228 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDW+ +KAPS F +R+VGKTLV R+ G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 21 DPFARKDWFSVKAPSTFAIRDVGKTLVNRSTGLKNANDALKGRIFEVSLADLQKDEDHAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLFCI
Sbjct: 81 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM +IM +A++C L L K I EVIGREIEK+T
Sbjct: 141 FTKRRPNQIKKTTYAQSSQIRAIRKKMTDIMQREASACTLSQLTTKLIPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPAD 228
IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S +D G KV+ D
Sbjct: 201 QGIYPLQNVHVRKVKLLKAPKFDLGNLLSLHGESSTDDAGQKVEGARD 248
>gi|169612599|ref|XP_001799717.1| hypothetical protein SNOG_09423 [Phaeosphaeria nodorum SN15]
gi|121920135|sp|Q0UFP1.1|RS3A_PHANO RecName: Full=40S ribosomal protein S1
gi|111062495|gb|EAT83615.1| hypothetical protein SNOG_09423 [Phaeosphaeria nodorum SN15]
Length = 255
Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 149/231 (64%), Positives = 182/231 (78%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKKDWY++KAP F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 21 DTFAKKDWYNVKAPGTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF IG
Sbjct: 81 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFAIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EIM A+SC L L +K I EVIGREIEK+T
Sbjct: 141 FTKRRPNQIKKTTYAASSQIRAIRKKMVEIMTRDASSCTLAQLTQKLIPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPI 231
IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S +D G KV+R E +
Sbjct: 201 QGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSADDSGQKVEREFKETV 251
>gi|322709478|gb|EFZ01054.1| 40S ribosomal protein S3 [Metarhizium anisopliae ARSEF 23]
Length = 256
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 150/231 (64%), Positives = 182/231 (78%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAPS F VR+VGKTLV RT G K A++ LK R+ EVSL DL +EEH++
Sbjct: 22 DPFSRKDWYSIKAPSSFSVRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEEHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF IG
Sbjct: 82 RKVRLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM +I+ +A+SC L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPI 231
IYPLQNV IRKVK+LKAPKFDLG LM +HG+ ++D G KV+R E +
Sbjct: 202 IGIYPLQNVHIRKVKLLKAPKFDLGALMALHGESGTDDQGQKVEREFKERV 252
>gi|401886821|gb|EJT50838.1| 40s ribosomal protein s3ae-a (s1-a) [Trichosporon asahii var.
asahii CBS 2479]
gi|406698771|gb|EKD01998.1| 40s ribosomal protein s3ae-a (s1-a) [Trichosporon asahii var.
asahii CBS 8904]
Length = 258
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 181/235 (77%), Gaps = 2/235 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAPS F RNVGKTLV R+QG K A++ LK RV EVSL DL N++E ++
Sbjct: 22 DPFTRKDWYDIKAPSYFENRNVGKTLVNRSQGLKNANDSLKGRVLEVSLADLNNDQEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L+ EDV GKN LT+F+GM FTTDKLRSLVRKW TL+EA+VDVKTTD + LRLF IG
Sbjct: 82 RKIQLKVEDVSGKNCLTSFYGMDFTTDKLRSLVRKWQTLVEAHVDVKTTDGYILRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQVK+T YAQ+SQ+R I KM EIM + + DLK LV+KF+ E IGREIEKA
Sbjct: 142 FTQRNRNQVKKTTYAQSSQVRAIHAKMTEIMRREGEASDLKELVQKFVPESIGREIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAD--EPIPEA 234
IYPL NV++RKVKI+KAPK D+ KL+E+HG+ + G KV + D EP P A
Sbjct: 202 KGIYPLHNVYVRKVKIVKAPKLDMSKLLEMHGEAAAQPGSKVSKGGDFVEPAPLA 256
>gi|301104382|ref|XP_002901276.1| 40S ribosomal protein S3a [Phytophthora infestans T30-4]
gi|262101210|gb|EEY59262.1| 40S ribosomal protein S3a [Phytophthora infestans T30-4]
Length = 261
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 180/230 (78%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYD+KAP+ F RN GKTLV RT GTKIASEGL+ RVFEV L DL +E+ A+
Sbjct: 22 DPFSRKDWYDVKAPAIFSERNCGKTLVNRTAGTKIASEGLRGRVFEVCLADLNKDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRL AE++QG ++T F GM FT DKL SL+RKW TLIEA+VDVKTTD + +RLFCI
Sbjct: 82 RKIRLCAEEIQGSQIITGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+T YA+T+QIR IR+KM IM +A+ CD+K L KF+ E+IG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTEEASKCDIKDLFLKFVPEIIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPI 231
IYPLQNV+IRK KILK PKFDL +LME+H +E+ G KV R D+ +
Sbjct: 202 QGIYPLQNVYIRKCKILKKPKFDLVRLMELHEGGAEEKGAKVAREEDQLV 251
>gi|401408125|ref|XP_003883511.1| hypothetical protein NCLIV_032660 [Neospora caninum Liverpool]
gi|325117928|emb|CBZ53479.1| hypothetical protein NCLIV_032660 [Neospora caninum Liverpool]
Length = 259
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/229 (64%), Positives = 182/229 (79%), Gaps = 1/229 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WYD+KAP+ F VRN GKTLVT++QGTK+A +GL+ RV+EV+L DL N+E+
Sbjct: 21 GDPFLKKEWYDLKAPTLFNVRNFGKTLVTKSQGTKLAVDGLRGRVYEVNLADLNNDEDQG 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+L ED+QG+N LT+F GM T DK+ SLVRK H+LIEA+VDV T D +TLR+FCI
Sbjct: 81 FRKIKLCCEDIQGRNCLTDFHGMDMTRDKICSLVRKCHSLIEAFVDVTTLDGYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR P+QVK TCYAQTSQIR IR+KM IM A+A+ C L+ LV+KFI E IG++IE A
Sbjct: 141 GFTKRRPDQVKSTCYAQTSQIRAIRKKMMTIMSAEASKCQLRDLVKKFIPESIGKDIENA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 229
I+PLQNVFIRKVK+LK PKFDL KLME+HG+ EDVG KV + E
Sbjct: 201 CKGIFPLQNVFIRKVKMLKKPKFDLTKLMELHGEV-EDVGRKVQAESGE 248
>gi|452982079|gb|EME81838.1| hypothetical protein MYCFIDRAFT_87079 [Pseudocercospora fijiensis
CIRAD86]
Length = 257
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/225 (64%), Positives = 181/225 (80%), Gaps = 1/225 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPFA+KDW+ +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA
Sbjct: 20 TDPFARKDWFSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHA 79
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLFCI
Sbjct: 80 FRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVVVKTTDDYLLRLFCI 139
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR PNQ+K+T YA++SQIRQIR+KM +IM +A SC L L K I EVIGREIEK+
Sbjct: 140 AFTKRRPNQIKKTTYARSSQIRQIRKKMTDIMQREAQSCTLSQLTTKLIPEVIGREIEKS 199
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVD 224
T IYPLQNV +RKVK+LK+PKFDLG L+ +HG+ S +D G KV+
Sbjct: 200 TQGIYPLQNVHVRKVKLLKSPKFDLGNLLSLHGESSTDDAGNKVE 244
>gi|452823851|gb|EME30858.1| 40S ribosomal protein S3A isoform 2 [Galdieria sulphuraria]
gi|452823852|gb|EME30859.1| 40S ribosomal protein S3A isoform 1 [Galdieria sulphuraria]
Length = 263
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/232 (64%), Positives = 185/232 (79%), Gaps = 4/232 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLN--EEEH 59
DPF +K+WYDIKAP+ F R VGKTLVT+T GTKIA++ LK RV++V L DL + +E
Sbjct: 22 DPFLRKEWYDIKAPAMFSQRQVGKTLVTKTTGTKIAADSLKGRVYDVCLADLSSNKDESL 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRKIRLR E+V+G+N LTNF+GM F DKL L+RKW +LIEA+VDVKTTD + LRLFC
Sbjct: 82 AYRKIRLRCEEVEGRNCLTNFYGMDFARDKLCGLIRKWQSLIEAHVDVKTTDGYLLRLFC 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFTKR QVK+TCYAQTS+IR IR+KM EIMV +A+SC+LK LV KFI E IG +IEK
Sbjct: 142 IGFTKRRKGQVKKTCYAQTSKIRAIRKKMTEIMVREASSCELKELVHKFIPETIGSDIEK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--EDVGVKVDRPADE 229
A +SI+PLQNV IRKVK+L+AP+ D+ KLME+H + ED G+KV+RP +E
Sbjct: 202 ACASIFPLQNVHIRKVKMLRAPRLDIAKLMELHTESGIEEDAGMKVERPLEE 253
>gi|398393656|ref|XP_003850287.1| 40S ribosomal protein S1 [Zymoseptoria tritici IPO323]
gi|339470165|gb|EGP85263.1| hypothetical protein MYCGRDRAFT_105557 [Zymoseptoria tritici
IPO323]
Length = 257
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/224 (65%), Positives = 179/224 (79%), Gaps = 1/224 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWY +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 21 DPFARKDWYSVKAPSTFNIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLFCI
Sbjct: 81 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM +IM +A +C L L K I EVIGREIEK+T
Sbjct: 141 FTKRRPNQIKKTTYAASSQIRAIRKKMTDIMQREAQACTLSQLTTKLIPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVD 224
IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S +D G KV+
Sbjct: 201 QGIYPLQNVHVRKVKLLKAPKFDLGNLLSLHGESSTDDSGQKVE 244
>gi|452841225|gb|EME43162.1| hypothetical protein DOTSEDRAFT_72517 [Dothistroma septosporum
NZE10]
Length = 257
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/225 (64%), Positives = 180/225 (80%), Gaps = 1/225 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPFA+KDW+ +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA
Sbjct: 20 TDPFARKDWFSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHA 79
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLFCI
Sbjct: 80 FRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFCI 139
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR PNQ+K+T YA++SQIR IR+KM +IM +A SC L L K I EVIGREIEK+
Sbjct: 140 AFTKRRPNQIKKTTYARSSQIRAIRKKMTDIMSREAQSCTLSQLTTKLIPEVIGREIEKS 199
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVD 224
T IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S +D G KV+
Sbjct: 200 TQGIYPLQNVHVRKVKLLKAPKFDLGNLLSLHGESSTDDSGQKVE 244
>gi|348685181|gb|EGZ24996.1| hypothetical protein PHYSODRAFT_285013 [Phytophthora sojae]
Length = 261
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/230 (63%), Positives = 179/230 (77%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWYD+KAP+ F R GKTLV RT GTKIASEGL+ RVFEV L DL +E+ A+
Sbjct: 22 DPFARKDWYDVKAPAIFSERTCGKTLVNRTAGTKIASEGLRGRVFEVCLADLNKDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRL AE++QG V+T F GM FT DKL SL+RKW TLIEA+VDVKTTD + +RLFCI
Sbjct: 82 RKIRLCAEEIQGNQVVTGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+T YA+T+QIR IR+KM IM +A+ CD+K L KF+ E+IG+EIEKAT
Sbjct: 142 FTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTEEASKCDIKDLFLKFVPEIIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPI 231
IYPLQNV+IRK KILK PKFDL +LME+H +E+ G KV R D+ +
Sbjct: 202 QGIYPLQNVYIRKCKILKKPKFDLVRLMELHEGGAEEKGAKVAREEDQLV 251
>gi|114153002|gb|ABI52667.1| 40S ribosomal protein S3a [Argas monolakensis]
Length = 255
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/237 (62%), Positives = 183/237 (77%), Gaps = 13/237 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYD+KAP + VRN+GKT V RTQGTKIASEGLK RVFEVS DL N E+ A+
Sbjct: 9 DPFTRKDWYDVKAPMMYSVRNIGKTFVNRTQGTKIASEGLKGRVFEVSQADLQNGED-AF 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCIG
Sbjct: 68 RKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCIG 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+TCYAQ +Q+RQIR+KM E+MV + ++ DLK +V K I E IG++IEKA
Sbjct: 128 FTKKCSNQVKKTCYAQHTQVRQIRKKMTEMMVREVSTSDLKDVVNKLIPESIGKDIEKAC 187
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE------------DVGVKVDRP 226
IYPL +V IRKVK+LK PKF+LGKL+E+HG+ + + G+KVDRP
Sbjct: 188 QRIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGTSKGGAAPATTPTGEEGIKVDRP 244
>gi|242794679|ref|XP_002482424.1| 40S ribosomal protein S1 [Talaromyces stipitatus ATCC 10500]
gi|269969614|sp|B8MBY6.1|RS3A_TALSN RecName: Full=40S ribosomal protein S1
gi|218719012|gb|EED18432.1| 40S ribosomal protein S3Ae [Talaromyces stipitatus ATCC 10500]
Length = 256
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/234 (62%), Positives = 186/234 (79%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFQIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EI+ +AASC L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVEREFKETVLES 255
>gi|379994269|gb|AFD22761.1| 40S ribosomal protein S3a, partial [Collodictyon triciliatum]
Length = 245
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 183/224 (81%), Gaps = 2/224 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYDIKAPS FR GKT+VTRT GT+IASE LK RVFEV+LGDL+ E+ +
Sbjct: 22 DPFTKKEWYDIKAPSVFR--QAGKTIVTRTTGTRIASEALKGRVFEVNLGDLMKSEDFGF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L+ E+VQG++ LTNF+GM FTTDKLRSLVRKW +LIEA+ DVKT D + +R+F I
Sbjct: 80 RKIKLKCEEVQGRSCLTNFYGMDFTTDKLRSLVRKWQSLIEAHADVKTQDGYVVRVFAIA 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PN +K+TCYA++SQI+QIR+KM +I+ + +LK+LV+KF+AE IGR+IEKA
Sbjct: 140 FTKKRPNTLKKTCYAKSSQIKQIRKKMVDIITREVNHSELKALVKKFVAESIGRQIEKAG 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR 225
S IYPLQNVFIRKVKILK+PKFD+ KL+E+H + S DVG +V R
Sbjct: 200 SRIYPLQNVFIRKVKILKSPKFDVAKLLELHAETSADVGKQVSR 243
>gi|237837685|ref|XP_002368140.1| 40S ribosomal protein S3a, putative [Toxoplasma gondii ME49]
gi|211965804|gb|EEB01000.1| 40S ribosomal protein S3a, putative [Toxoplasma gondii ME49]
gi|221488595|gb|EEE26809.1| 40S ribosomal protein S3A, putative [Toxoplasma gondii GT1]
gi|221509094|gb|EEE34663.1| 40S ribosomal protein S3A, putative [Toxoplasma gondii VEG]
Length = 259
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/229 (63%), Positives = 181/229 (79%), Gaps = 1/229 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WYD+KAP+ F VRN GKTLVT++QGTK+A +GL+ RV+EV+L DL N+E+
Sbjct: 21 GDPFLKKEWYDLKAPTLFNVRNFGKTLVTKSQGTKLAVDGLRGRVYEVNLADLNNDEDQG 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+L ED+QG+N LT+F GM T DK+ SLVRK H+LIEA+VDV T D +TLR+FCI
Sbjct: 81 FRKIKLCCEDIQGRNCLTDFHGMDMTRDKICSLVRKCHSLIEAFVDVTTLDGYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR P QVK TCYAQTSQIR IR+KM IM A+A+ C L+ LV+KFI E IG++IE A
Sbjct: 141 AFTKRRPEQVKSTCYAQTSQIRAIRKKMMTIMSAEASKCQLRDLVKKFIPESIGKDIENA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 229
I+PLQNVFIRKVK+LK PKFDL KLME+HG+ +EDVG KV + E
Sbjct: 201 CKGIFPLQNVFIRKVKMLKKPKFDLTKLMELHGE-AEDVGRKVQAESGE 248
>gi|407922788|gb|EKG15880.1| Ribosomal protein S3Ae [Macrophomina phaseolina MS6]
Length = 255
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/233 (63%), Positives = 180/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKKDWY +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 21 DAFAKKDWYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ +RLFCI
Sbjct: 81 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVVVKTTDDYLIRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+++T YA +SQIR IR+KM EIM +A+SC L L K I EVIGREIEKA
Sbjct: 141 FTKRRPNQIRKTTYAASSQIRAIRKKMTEIMSREASSCTLSQLTTKLIPEVIGREIEKAA 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV +RKVK+LK PKFDLG L+ +HG+ S D G KV+R E + E
Sbjct: 201 QGIYPLQNVHVRKVKLLKQPKFDLGALLTLHGESSHDESGQKVEREFKETVLE 253
>gi|361129806|gb|EHL01688.1| putative 40S ribosomal protein S1 [Glarea lozoyensis 74030]
Length = 256
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 180/231 (77%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 22 DPFMRKDWYQVKAPSSFNVRDVGKTLVNRTTGIKNANDALKGRIFEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASSCTLTQLTTKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPI 231
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G KV+R E +
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDESGQKVEREFKEKV 252
>gi|402081110|gb|EJT76255.1| 40S ribosomal protein S3aE [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 256
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/233 (63%), Positives = 183/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 22 DPFSRKDWYGIKAPAPFNIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA TSQIR IRRKM EI+ +A++C L+ L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAATSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK PKFDLG L+ +HG+ + D G+KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGESTTDEQGLKVEREFKERVLE 254
>gi|212536024|ref|XP_002148168.1| 40S ribosomal protein S1 [Talaromyces marneffei ATCC 18224]
gi|269969600|sp|B6QGS2.1|RS3A_PENMQ RecName: Full=40S ribosomal protein S1
gi|210070567|gb|EEA24657.1| 40S ribosomal protein S3Ae [Talaromyces marneffei ATCC 18224]
Length = 256
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/234 (62%), Positives = 185/234 (79%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFQIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EI+ +AASC L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAGSSQIRAIRKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVEREFKETVLES 255
>gi|323448873|gb|EGB04766.1| hypothetical protein AURANDRAFT_38843 [Aureococcus anophagefferens]
Length = 269
Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 175/228 (76%), Gaps = 1/228 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY+IKAPS F RN GKTLVTRTQGTKIAS+ LK RVF++SL DL N+E+ Y
Sbjct: 22 DPFLKKEWYEIKAPSMFSQRNAGKTLVTRTQGTKIASDALKGRVFDLSLADLNNDEDQTY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L ED+QG N LTNF GM T DKL SL++KW TLIE VDVKTTD +TLR+FCI
Sbjct: 82 RKIKLVCEDIQGYNCLTNFHGMDMTRDKLASLIKKWQTLIEGNVDVKTTDGYTLRMFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT ++PNQ+ + CYA ++Q+R IR+KM EIM +A CDLK LV K I E +G EIEKA
Sbjct: 142 FTTKMPNQIAKMCYANSAQVRLIRKKMVEIMRDEATKCDLKELVLKLIPEYMGTEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPAD 228
+ I+PLQNVF+RKVK+LK PKFDL KLME+HGD +ED G V R +
Sbjct: 202 AGIFPLQNVFVRKVKVLKKPKFDLTKLMELHGDAGNEDSGAAVPREGE 249
>gi|440640535|gb|ELR10454.1| 40S ribosomal protein S1 [Geomyces destructans 20631-21]
Length = 256
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F++R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFTRKDWYQIKAPTSFQIRDVGKTLVNRTTGLKNANDSLKGRIVEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA + VKTTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASSCTLTQLTAKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKETVLE 254
>gi|396495355|ref|XP_003844525.1| hypothetical protein LEMA_P021760.1 [Leptosphaeria maculans JN3]
gi|312221105|emb|CBY01046.1| hypothetical protein LEMA_P021760.1 [Leptosphaeria maculans JN3]
Length = 400
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 181/231 (78%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FAKKDWY++KAP F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 166 DTFAKKDWYNVKAPGTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAF 225
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 226 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFAIA 285
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EIM A+SC L L +K I EVIGREIEK+T
Sbjct: 286 FTKRRPNQIKKTTYAASSQIRAIRKKMVEIMTRDASSCTLAQLTQKLIPEVIGREIEKST 345
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPI 231
IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S +D G KV+R E +
Sbjct: 346 QGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSADDSGQKVEREFKETV 396
>gi|122050127|sp|Q4KTD9.1|RS3A_SUBDO RecName: Full=40S ribosomal protein S3a
gi|61654706|gb|AAX48879.1| S3a [Suberites domuncula]
Length = 252
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 178/219 (81%), Gaps = 1/219 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F VRN+GKTLVTRTQG K+AS+GLK RVFEVSL DL N+E+ ++
Sbjct: 22 DPFTKKDWYDVKAPSMFAVRNIGKTLVTRTQGKKLASDGLKGRVFEVSLADLQNDEQ-SF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL +ED+QGKNVLTNF GM+ TTDKLR+LV+KW TLIEA VDVKTTD + LRLFCIG
Sbjct: 81 RKFRLISEDIQGKNVLTNFHGMTMTTDKLRALVKKWQTLIEANVDVKTTDGYLLRLFCIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQ R IR+KM ++M + + DLK V K I + IG++IEK
Sbjct: 141 FTKRQPNQIKKTSYAKSSQCRSIRKKMVDVMTREVSQIDLKETVNKLIPDSIGKDIEKKC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 220
SIYPL +VF+RKVK+LK PKFD+G+LM++HG+ + G
Sbjct: 201 QSIYPLHDVFVRKVKVLKKPKFDIGRLMDLHGESAGGKG 239
>gi|367024653|ref|XP_003661611.1| hypothetical protein MYCTH_2314609 [Myceliophthora thermophila ATCC
42464]
gi|347008879|gb|AEO56366.1| hypothetical protein MYCTH_2314609 [Myceliophthora thermophila ATCC
42464]
Length = 256
Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 181/234 (77%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+H++
Sbjct: 22 DPFSRKDWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V V TTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVTTTDHYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMVEIIQREASSCTLTQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG LM +HG+ S D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALMALHGESSTDEQGQKVEREFREQVLES 255
>gi|260806989|ref|XP_002598366.1| hypothetical protein BRAFLDRAFT_69722 [Branchiostoma floridae]
gi|229283638|gb|EEN54378.1| hypothetical protein BRAFLDRAFT_69722 [Branchiostoma floridae]
Length = 266
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 152/244 (62%), Positives = 187/244 (76%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAP+ F +R +GKTLVT+T GTKIASEGLK+RVFEVSL DL N+E A+
Sbjct: 23 DPFTKKDWYDVKAPAMFNIRQIGKTLVTKTTGTKIASEGLKNRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L E+VQG+N LTNF GM+ TTDKLRS+V+KW TLIEA VDV+TTD + LRLFCIG
Sbjct: 82 RKFKLIVEEVQGRNCLTNFHGMNLTTDKLRSMVKKWQTLIEANVDVRTTDGYLLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+K+T YAQ +QIR IR+KM EIM + +S DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRQNQIKKTAYAQHTQIRAIRKKMVEIMTREVSSNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV---------GVKVDRPA--DEP 230
IYPL +V+IRKVK+LK PKFD+GKLME+HG+ S V G KVDRP + P
Sbjct: 202 QGIYPLHDVYIRKVKVLKKPKFDVGKLMELHGEGSGAVSKPVATTETGEKVDRPEGYEPP 261
Query: 231 IPEA 234
I EA
Sbjct: 262 IQEA 265
>gi|391332170|ref|XP_003740510.1| PREDICTED: 40S ribosomal protein S3a-like [Metaseiulus
occidentalis]
Length = 263
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 148/237 (62%), Positives = 181/237 (76%), Gaps = 7/237 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYD+KAPS F++RNVGKTLV RTQGTKIAS+GLK RV+EVS DL N E A+
Sbjct: 23 DPFTRKDWYDVKAPSMFQIRNVGKTLVNRTQGTKIASDGLKGRVYEVSQADL-NNNEDAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L E+VQG++ LTNF GM TTDKLRS+V+KW TLIEA VDV+TTD F LRLFCIG
Sbjct: 82 RKFKLVCEEVQGRHCLTNFHGMDLTTDKLRSMVKKWQTLIEAQVDVRTTDGFVLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ +QVK+TCYAQ +Q+R IRRKM EI+ + +SCDLK +V K I E IG++IEK
Sbjct: 142 FTKKTQSQVKKTCYAQHAQVRAIRRKMVEIIQREVSSCDLKDVVSKLIPESIGKDIEKVC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVK------VDRPADEPIP 232
++I+PL +V IRKVK+LK PKFD+ KL+E+HGD G K VDRP D P
Sbjct: 202 NAIFPLHDVLIRKVKVLKKPKFDMSKLLELHGDSKGSSGTKTADGMAVDRPDDYEPP 258
>gi|389624003|ref|XP_003709655.1| 40S ribosomal protein S3aE [Magnaporthe oryzae 70-15]
gi|269969585|sp|A4R1I7.1|RS3A_MAGO7 RecName: Full=40S ribosomal protein S1
gi|351649184|gb|EHA57043.1| 40S ribosomal protein S3aE [Magnaporthe oryzae 70-15]
gi|440474893|gb|ELQ43608.1| 40S ribosomal protein S3aE [Magnaporthe oryzae Y34]
gi|440487428|gb|ELQ67217.1| 40S ribosomal protein S3aE [Magnaporthe oryzae P131]
Length = 256
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 182/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWY IKAP+ F +R+VGKTLV R+ G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A++C L+ L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK PKFDLG L+ +HG+ + D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGESTTDEQGQKVEREFKERVLE 254
>gi|426246953|ref|XP_004017251.1| PREDICTED: 40S ribosomal protein S3a [Ovis aries]
Length = 264
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/242 (61%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R D P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYDPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|442758847|gb|JAA71582.1| Putative 40s ribosomal protein s3a [Ixodes ricinus]
Length = 270
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/238 (62%), Positives = 182/238 (76%), Gaps = 14/238 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYD+KAP+ + VRN+GKT V RTQGTKIASEGLK RVFEVS DL N E+ AY
Sbjct: 23 DPFTRKDWYDVKAPTMYTVRNIGKTFVNRTQGTKIASEGLKGRVFEVSQADLTNGED-AY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCIG
Sbjct: 82 RKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+K+TCYAQ +Q+R IR+KM E+MV + +S +LK +V K I IG++IEK+
Sbjct: 142 FTKKCANQLKKTCYAQHNQVRLIRKKMTEMMVVEVSSSNLKDVVNKLIPGSIGKDIEKSC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------------DVGVKVDRP 226
IYPL +V IRKVK+LK PKF+LGKL+E+HG+ S + GVKVDRP
Sbjct: 202 QHIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGSSKGGAASTAAVAKGEEGVKVDRP 259
>gi|158255586|dbj|BAF83764.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/243 (60%), Positives = 186/243 (76%), Gaps = 14/243 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR------PAD 228
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R P
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 229 EPI 231
EP+
Sbjct: 262 EPV 264
>gi|210075959|ref|XP_505043.2| 40S ribosomal protein S1 [Yarrowia lipolytica]
gi|269969629|sp|Q6C2R9.2|RS3A_YARLI RecName: Full=40S ribosomal protein S1
gi|199424922|emb|CAG77850.2| YALI0F05676p [Yarrowia lipolytica CLIB122]
Length = 255
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/233 (62%), Positives = 184/233 (78%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWY+IKAPS F R+VGKTLV R+ G ++A++ LK RV EVSL DL +E+H++
Sbjct: 22 DPFTKKDWYNIKAPSTFENRDVGKTLVNRSTGLRLANDYLKGRVLEVSLADLQGQEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+K++LR ++VQGKN+LTNF G FT+DKLRSLVRKW TLIEA V VKT+D++ LRLF IG
Sbjct: 82 KKVKLRVDEVQGKNLLTNFHGFDFTSDKLRSLVRKWQTLIEANVTVKTSDDYFLRLFVIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQTSQI QIR+KM +I+V +A++ L L K I EVIGREIEKAT
Sbjct: 142 FTKRQANQVKKTTYAQTSQINQIRKKMTDIVVREASNVTLAQLTAKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA 234
+IYPLQNV+IRKVK+LK PKFDLG L+ +HG ++D G KV+R + + E+
Sbjct: 202 QNIYPLQNVYIRKVKLLKQPKFDLGALLALHGGATDDNGKKVNREFKDVVLES 254
>gi|255943679|ref|XP_002562607.1| Pc20g00440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|269969599|sp|B6HFE0.1|RS3A_PENCW RecName: Full=40S ribosomal protein S1
gi|211587342|emb|CAP85373.1| Pc20g00440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 256
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/234 (61%), Positives = 184/234 (78%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAPS F+ R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFTRKDEYSVKAPSTFQTRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA + VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EI+ +A++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIIQREASTCTLSQLTHKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESATDDKGQKVEREFKETVLES 255
>gi|119597983|gb|EAW77577.1| hCG33299, isoform CRA_a [Homo sapiens]
Length = 264
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 188/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRKNQIRKTSYAQHQQVRQIRKKMMEIMIREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|403272348|ref|XP_003945196.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3a [Saimiri
boliviensis boliviensis]
Length = 264
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKCNNQIRKTSYAQHQQVRQIRKKMMEIMTXEVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKAAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|328857799|gb|EGG06914.1| hypothetical protein MELLADRAFT_43398 [Melampsora larici-populina
98AG31]
Length = 257
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 180/235 (76%), Gaps = 1/235 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF +KDWYD+KAPS F RN GKT R+ G K A++ LK R+ E+SL DL +EE A
Sbjct: 21 ADPFTRKDWYDVKAPSMFENRNAGKTFTNRSSGMKNANDALKGRIIELSLADLNKDEEQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW TLIEA++D++TTD + +RLF I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHMDIRTTDGYLIRLFTI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR PNQ+K+T YA++SQIR+IR+KM EI+ + SCDLK LV KF+ EVIGREIEKA
Sbjct: 141 AFTKRRPNQIKKTTYAKSSQIREIRQKMFEIISRECTSCDLKELVSKFVPEVIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV++RK KILKAPK+D KL E+HG+ S++ G KV EP P A
Sbjct: 201 CQGIYPLQNVYVRKAKILKAPKYDQNKLFELHGESGSDEAGKKVVGEFKEPAPLA 255
>gi|156064375|ref|XP_001598109.1| 40S ribosomal protein S1 [Sclerotinia sclerotiorum 1980 UF-70]
gi|269969610|sp|A7E4H3.1|RS3A_SCLS1 RecName: Full=40S ribosomal protein S1
gi|154691057|gb|EDN90795.1| 40S ribosomal protein S3aE [Sclerotinia sclerotiorum 1980 UF-70]
Length = 256
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/233 (62%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAPS F++R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFTRKDWYQIKAPSSFQIRDVGKTLVNRTTGLKNANDSLKGRIIEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA + VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A++C L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKEKVLE 254
>gi|425766701|gb|EKV05302.1| 40S ribosomal protein S1 [Penicillium digitatum PHI26]
gi|425781849|gb|EKV19788.1| 40S ribosomal protein S1 [Penicillium digitatum Pd1]
Length = 256
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/233 (61%), Positives = 183/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAPS F+ R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFTRKDEYSVKAPSTFQTRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA + VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EI+ +A++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIIQREASTCTLSQLTHKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESATDDKGQKVEREFKETVLE 254
>gi|331247123|ref|XP_003336191.1| 40S ribosomal protein S1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|331252751|ref|XP_003338900.1| 40S ribosomal protein S1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309315181|gb|EFP91772.1| 40S ribosomal protein S1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309317890|gb|EFP94481.1| 40S ribosomal protein S1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 257
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 179/235 (76%), Gaps = 1/235 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF +KDWYD+KAPS F RN GKT R+ G K A++ LK R+ E+SL DL +EE A
Sbjct: 21 ADPFTRKDWYDVKAPSMFENRNAGKTFTNRSAGMKNANDSLKGRIIELSLADLNKDEEQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW TLIEA++D++TTD + LRLF I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHIDIRTTDGYILRLFTI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR PNQ+K+T YA++SQIR+IR+KM EI+ + ++CDLK LV KF+ EVIGREIEKA
Sbjct: 141 AFTKRRPNQIKKTTYAKSSQIREIRQKMFEIINRETSTCDLKELVSKFVPEVIGREIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPEA 234
IYPLQNV++RK KILKAPK+D KL E+HG+ D G KV EP P A
Sbjct: 201 CQGIYPLQNVYVRKAKILKAPKYDQNKLFELHGESGGDEAGKKVVGEFKEPTPLA 255
>gi|154312122|ref|XP_001555389.1| 40S ribosomal protein S1 [Botryotinia fuckeliana B05.10]
gi|269969565|sp|A6RZS5.1|RS3A_BOTFB RecName: Full=40S ribosomal protein S1
gi|347836882|emb|CCD51454.1| similar to 40S ribosomal protein S3aE [Botryotinia fuckeliana]
Length = 256
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/233 (62%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAPS F++R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFTRKDWYQIKAPSSFQIRDVGKTLVNRTTGLKNANDSLKGRIVEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA + VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A++C L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKEKVLE 254
>gi|302910560|ref|XP_003050314.1| 40S ribosomal protein S1 [Nectria haematococca mpVI 77-13-4]
gi|269969589|sp|C7YTD6.1|RS3A_NECH7 RecName: Full=40S ribosomal protein S1
gi|256731251|gb|EEU44601.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 256
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFTRKDWYSIKAPNPFNVRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I
Sbjct: 82 RKVRLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM +I+ +A+SC L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK+PKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
>gi|75029812|sp|Q4PM31.1|RS3A_IXOSC RecName: Full=40S ribosomal protein S3a
gi|67083999|gb|AAY66934.1| 40S ribosomal protein S3a [Ixodes scapularis]
Length = 270
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/238 (61%), Positives = 182/238 (76%), Gaps = 14/238 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYD+KAP+ + VRN+GKT V RTQGTKIASEGLK RVFEVS DL N E+ AY
Sbjct: 23 DPFTRKDWYDVKAPTMYTVRNIGKTFVNRTQGTKIASEGLKGRVFEVSQADLTNGED-AY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCIG
Sbjct: 82 RKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+K+TCYAQ +Q+R IR+KM E+MV + +S +LK +V K I IG++IEK+
Sbjct: 142 FTKKCANQLKKTCYAQHNQVRLIRKKMTEMMVVEVSSSNLKDVVNKLIPGSIGKDIEKSC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------------DVGVKVDRP 226
IYPL +V IRKVK+LK PKF+LGKL+E+HG+ + + GVKVDRP
Sbjct: 202 QHIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGTSKGGAASTAAVAKGEEGVKVDRP 259
>gi|429852511|gb|ELA27643.1| 40s ribosomal protein s3ae [Colletotrichum gloeosporioides Nara
gc5]
Length = 256
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFSRKDWYQIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRILEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLTQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK PKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALMGLHGESGTDDQGQKVEREFKERVLE 254
>gi|291195766|gb|ADD84599.1| 40S ribosomal protein S3AE [Magnaporthe oryzae]
Length = 256
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/233 (63%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWY IKAP+ F +R+VGKTLV R+ G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A++C L+ L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV IRKV +LK PKFDLG L+ +HG+ + D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVNLLKQPKFDLGGLLALHGESTTDEQGQKVEREFKERVLE 254
>gi|90077422|dbj|BAE88391.1| unnamed protein product [Macaca fascicularis]
Length = 264
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|426377726|ref|XP_004055608.1| PREDICTED: 40S ribosomal protein S3a-like [Gorilla gorilla gorilla]
Length = 264
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPATFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|269969638|sp|Q2GW51.2|RS3A_CHAGB RecName: Full=40S ribosomal protein S1
Length = 256
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 22 DPFTRKDWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V V TTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVMTTDHYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA TSQIR IRRKM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAATSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG LM +HG+ S D G KV+R E + E+
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALMTLHGESSTDEQGQKVEREFREQVLES 255
>gi|45219787|gb|AAH66926.1| Ribosomal protein S3A [Homo sapiens]
Length = 264
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|293340905|ref|XP_002724797.1| PREDICTED: 40S ribosomal protein S3a-like [Rattus norvegicus]
gi|392352144|ref|XP_003751127.1| PREDICTED: 40S ribosomal protein S3a-like [Rattus norvegicus]
Length = 264
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I++ IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVSKLISDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|403262963|ref|XP_003923833.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403262965|ref|XP_003923834.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Saimiri
boliviensis boliviensis]
gi|403262967|ref|XP_003923835.1| PREDICTED: 40S ribosomal protein S3a-like isoform 3 [Saimiri
boliviensis boliviensis]
gi|403262969|ref|XP_003923836.1| PREDICTED: 40S ribosomal protein S3a-like isoform 4 [Saimiri
boliviensis boliviensis]
gi|403262971|ref|XP_003923837.1| PREDICTED: 40S ribosomal protein S3a-like isoform 5 [Saimiri
boliviensis boliviensis]
gi|403262973|ref|XP_003923838.1| PREDICTED: 40S ribosomal protein S3a-like isoform 6 [Saimiri
boliviensis boliviensis]
gi|403262975|ref|XP_003923839.1| PREDICTED: 40S ribosomal protein S3a-like isoform 7 [Saimiri
boliviensis boliviensis]
gi|403262977|ref|XP_003923840.1| PREDICTED: 40S ribosomal protein S3a-like isoform 8 [Saimiri
boliviensis boliviensis]
Length = 264
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKAAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|444729551|gb|ELW69964.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 264
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKDVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|4506723|ref|NP_000997.1| 40S ribosomal protein S3a isoform 1 [Homo sapiens]
gi|77404254|ref|NP_001029210.1| 40S ribosomal protein S3a [Bos taurus]
gi|73977903|ref|XP_534275.2| PREDICTED: 40S ribosomal protein S3a isoform 1 [Canis lupus
familiaris]
gi|114596381|ref|XP_001153182.1| PREDICTED: uncharacterized protein LOC461536 isoform 6 [Pan
troglodytes]
gi|149698161|ref|XP_001501524.1| PREDICTED: 40S ribosomal protein S3a-like [Equus caballus]
gi|291389960|ref|XP_002711475.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
gi|291401135|ref|XP_002716948.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
gi|291408105|ref|XP_002720434.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
gi|296195415|ref|XP_002745451.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Callithrix
jacchus]
gi|296237445|ref|XP_002763752.1| PREDICTED: 40S ribosomal protein S3a-like [Callithrix jacchus]
gi|301756072|ref|XP_002913885.1| PREDICTED: 40S ribosomal protein S3a-like [Ailuropoda melanoleuca]
gi|332217394|ref|XP_003257844.1| PREDICTED: 40S ribosomal protein S3a isoform 1 [Nomascus
leucogenys]
gi|332217416|ref|XP_003257855.1| PREDICTED: 40S ribosomal protein S3a isoform 12 [Nomascus
leucogenys]
gi|332217424|ref|XP_003257859.1| PREDICTED: 40S ribosomal protein S3a isoform 16 [Nomascus
leucogenys]
gi|332217428|ref|XP_003257861.1| PREDICTED: 40S ribosomal protein S3a isoform 18 [Nomascus
leucogenys]
gi|332217434|ref|XP_003257864.1| PREDICTED: 40S ribosomal protein S3a isoform 21 [Nomascus
leucogenys]
gi|332217440|ref|XP_003257867.1| PREDICTED: 40S ribosomal protein S3a isoform 24 [Nomascus
leucogenys]
gi|332217442|ref|XP_003257868.1| PREDICTED: 40S ribosomal protein S3a isoform 25 [Nomascus
leucogenys]
gi|332217450|ref|XP_003257872.1| PREDICTED: 40S ribosomal protein S3a isoform 29 [Nomascus
leucogenys]
gi|332217452|ref|XP_003257873.1| PREDICTED: 40S ribosomal protein S3a isoform 30 [Nomascus
leucogenys]
gi|332217454|ref|XP_003257874.1| PREDICTED: 40S ribosomal protein S3a isoform 31 [Nomascus
leucogenys]
gi|332217456|ref|XP_003257875.1| PREDICTED: 40S ribosomal protein S3a isoform 32 [Nomascus
leucogenys]
gi|332217460|ref|XP_003257877.1| PREDICTED: 40S ribosomal protein S3a isoform 34 [Nomascus
leucogenys]
gi|332217466|ref|XP_003257880.1| PREDICTED: 40S ribosomal protein S3a isoform 37 [Nomascus
leucogenys]
gi|332820312|ref|XP_003339113.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|332820322|ref|XP_003339117.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|332820340|ref|XP_003339124.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|332820350|ref|XP_003339129.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|332820362|ref|XP_003339133.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|332820372|ref|XP_003339138.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|332820376|ref|XP_003339140.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|348582384|ref|XP_003476956.1| PREDICTED: 40S ribosomal protein S3a-like [Cavia porcellus]
gi|390460340|ref|XP_003732462.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Callithrix
jacchus]
gi|390460342|ref|XP_003732463.1| PREDICTED: 40S ribosomal protein S3a-like isoform 3 [Callithrix
jacchus]
gi|390460344|ref|XP_003732464.1| PREDICTED: 40S ribosomal protein S3a-like isoform 4 [Callithrix
jacchus]
gi|390460346|ref|XP_003732465.1| PREDICTED: 40S ribosomal protein S3a-like isoform 5 [Callithrix
jacchus]
gi|390460348|ref|XP_003732466.1| PREDICTED: 40S ribosomal protein S3a-like isoform 6 [Callithrix
jacchus]
gi|390460350|ref|XP_003732467.1| PREDICTED: 40S ribosomal protein S3a-like isoform 7 [Callithrix
jacchus]
gi|390460353|ref|XP_003732468.1| PREDICTED: 40S ribosomal protein S3a-like isoform 8 [Callithrix
jacchus]
gi|390460355|ref|XP_003732469.1| PREDICTED: 40S ribosomal protein S3a-like isoform 9 [Callithrix
jacchus]
gi|390460357|ref|XP_003732470.1| PREDICTED: 40S ribosomal protein S3a-like isoform 10 [Callithrix
jacchus]
gi|390460359|ref|XP_003732471.1| PREDICTED: 40S ribosomal protein S3a-like isoform 11 [Callithrix
jacchus]
gi|390460361|ref|XP_003732472.1| PREDICTED: 40S ribosomal protein S3a-like isoform 12 [Callithrix
jacchus]
gi|390460363|ref|XP_003732473.1| PREDICTED: 40S ribosomal protein S3a-like isoform 13 [Callithrix
jacchus]
gi|390460365|ref|XP_003732474.1| PREDICTED: 40S ribosomal protein S3a-like isoform 14 [Callithrix
jacchus]
gi|390460367|ref|XP_003732475.1| PREDICTED: 40S ribosomal protein S3a-like isoform 15 [Callithrix
jacchus]
gi|397489819|ref|XP_003815913.1| PREDICTED: 40S ribosomal protein S3a isoform 1 [Pan paniscus]
gi|397489821|ref|XP_003815914.1| PREDICTED: 40S ribosomal protein S3a isoform 2 [Pan paniscus]
gi|397489823|ref|XP_003815915.1| PREDICTED: 40S ribosomal protein S3a isoform 3 [Pan paniscus]
gi|397489825|ref|XP_003815916.1| PREDICTED: 40S ribosomal protein S3a isoform 4 [Pan paniscus]
gi|397489827|ref|XP_003815917.1| PREDICTED: 40S ribosomal protein S3a isoform 5 [Pan paniscus]
gi|397489829|ref|XP_003815918.1| PREDICTED: 40S ribosomal protein S3a isoform 6 [Pan paniscus]
gi|397489831|ref|XP_003815919.1| PREDICTED: 40S ribosomal protein S3a isoform 7 [Pan paniscus]
gi|397489833|ref|XP_003815920.1| PREDICTED: 40S ribosomal protein S3a isoform 8 [Pan paniscus]
gi|397489835|ref|XP_003815921.1| PREDICTED: 40S ribosomal protein S3a isoform 9 [Pan paniscus]
gi|397489837|ref|XP_003815922.1| PREDICTED: 40S ribosomal protein S3a isoform 10 [Pan paniscus]
gi|397489839|ref|XP_003815923.1| PREDICTED: 40S ribosomal protein S3a isoform 11 [Pan paniscus]
gi|397489841|ref|XP_003815924.1| PREDICTED: 40S ribosomal protein S3a isoform 12 [Pan paniscus]
gi|397489843|ref|XP_003815925.1| PREDICTED: 40S ribosomal protein S3a isoform 13 [Pan paniscus]
gi|397489845|ref|XP_003815926.1| PREDICTED: 40S ribosomal protein S3a isoform 14 [Pan paniscus]
gi|397489847|ref|XP_003815927.1| PREDICTED: 40S ribosomal protein S3a isoform 15 [Pan paniscus]
gi|397489849|ref|XP_003815928.1| PREDICTED: 40S ribosomal protein S3a isoform 16 [Pan paniscus]
gi|397489851|ref|XP_003815929.1| PREDICTED: 40S ribosomal protein S3a isoform 17 [Pan paniscus]
gi|397489853|ref|XP_003815930.1| PREDICTED: 40S ribosomal protein S3a isoform 18 [Pan paniscus]
gi|397489855|ref|XP_003815931.1| PREDICTED: 40S ribosomal protein S3a isoform 19 [Pan paniscus]
gi|397489857|ref|XP_003815932.1| PREDICTED: 40S ribosomal protein S3a isoform 20 [Pan paniscus]
gi|397489859|ref|XP_003815933.1| PREDICTED: 40S ribosomal protein S3a isoform 21 [Pan paniscus]
gi|397489861|ref|XP_003815934.1| PREDICTED: 40S ribosomal protein S3a isoform 22 [Pan paniscus]
gi|397489863|ref|XP_003815935.1| PREDICTED: 40S ribosomal protein S3a isoform 23 [Pan paniscus]
gi|410038779|ref|XP_003950476.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038783|ref|XP_003950477.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038785|ref|XP_003950478.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038787|ref|XP_003950479.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038790|ref|XP_003950480.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038792|ref|XP_003950481.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038794|ref|XP_003950482.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038796|ref|XP_003950483.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038798|ref|XP_003950484.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038800|ref|XP_003950485.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038802|ref|XP_003950486.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038804|ref|XP_003950487.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038806|ref|XP_003950488.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038808|ref|XP_003950489.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038810|ref|XP_003950490.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038812|ref|XP_003950491.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410038814|ref|XP_003950492.1| PREDICTED: uncharacterized protein LOC461536 [Pan troglodytes]
gi|410956733|ref|XP_003984993.1| PREDICTED: 40S ribosomal protein S3a [Felis catus]
gi|426225354|ref|XP_004006831.1| PREDICTED: 40S ribosomal protein S3a-like [Ovis aries]
gi|426345683|ref|XP_004040533.1| PREDICTED: 40S ribosomal protein S3a isoform 1 [Gorilla gorilla
gorilla]
gi|426345685|ref|XP_004040534.1| PREDICTED: 40S ribosomal protein S3a isoform 2 [Gorilla gorilla
gorilla]
gi|426345687|ref|XP_004040535.1| PREDICTED: 40S ribosomal protein S3a isoform 3 [Gorilla gorilla
gorilla]
gi|426345689|ref|XP_004040536.1| PREDICTED: 40S ribosomal protein S3a isoform 4 [Gorilla gorilla
gorilla]
gi|426345691|ref|XP_004040537.1| PREDICTED: 40S ribosomal protein S3a isoform 5 [Gorilla gorilla
gorilla]
gi|426345693|ref|XP_004040538.1| PREDICTED: 40S ribosomal protein S3a isoform 6 [Gorilla gorilla
gorilla]
gi|426345695|ref|XP_004040539.1| PREDICTED: 40S ribosomal protein S3a isoform 7 [Gorilla gorilla
gorilla]
gi|426345697|ref|XP_004040540.1| PREDICTED: 40S ribosomal protein S3a isoform 8 [Gorilla gorilla
gorilla]
gi|426345699|ref|XP_004040541.1| PREDICTED: 40S ribosomal protein S3a isoform 9 [Gorilla gorilla
gorilla]
gi|426345701|ref|XP_004040542.1| PREDICTED: 40S ribosomal protein S3a isoform 10 [Gorilla gorilla
gorilla]
gi|426345703|ref|XP_004040543.1| PREDICTED: 40S ribosomal protein S3a isoform 11 [Gorilla gorilla
gorilla]
gi|426345705|ref|XP_004040544.1| PREDICTED: 40S ribosomal protein S3a isoform 12 [Gorilla gorilla
gorilla]
gi|426345707|ref|XP_004040545.1| PREDICTED: 40S ribosomal protein S3a isoform 13 [Gorilla gorilla
gorilla]
gi|426345709|ref|XP_004040546.1| PREDICTED: 40S ribosomal protein S3a isoform 14 [Gorilla gorilla
gorilla]
gi|426345711|ref|XP_004040547.1| PREDICTED: 40S ribosomal protein S3a isoform 15 [Gorilla gorilla
gorilla]
gi|426345713|ref|XP_004040548.1| PREDICTED: 40S ribosomal protein S3a isoform 16 [Gorilla gorilla
gorilla]
gi|426345715|ref|XP_004040549.1| PREDICTED: 40S ribosomal protein S3a isoform 17 [Gorilla gorilla
gorilla]
gi|426345717|ref|XP_004040550.1| PREDICTED: 40S ribosomal protein S3a isoform 18 [Gorilla gorilla
gorilla]
gi|426345719|ref|XP_004040551.1| PREDICTED: 40S ribosomal protein S3a isoform 19 [Gorilla gorilla
gorilla]
gi|426345721|ref|XP_004040552.1| PREDICTED: 40S ribosomal protein S3a isoform 20 [Gorilla gorilla
gorilla]
gi|426345723|ref|XP_004040553.1| PREDICTED: 40S ribosomal protein S3a isoform 21 [Gorilla gorilla
gorilla]
gi|441619259|ref|XP_004088562.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619270|ref|XP_004088563.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619275|ref|XP_004088564.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619281|ref|XP_004088565.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619284|ref|XP_004088566.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619287|ref|XP_004088567.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619290|ref|XP_004088568.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619298|ref|XP_004088569.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619301|ref|XP_004088570.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619312|ref|XP_004088571.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619317|ref|XP_004088572.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619320|ref|XP_004088573.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619323|ref|XP_004088574.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619329|ref|XP_004088575.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619332|ref|XP_004088576.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619335|ref|XP_004088577.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619338|ref|XP_004088578.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619341|ref|XP_004088579.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619344|ref|XP_004088580.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|441619347|ref|XP_004088581.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|47117764|sp|P61247.2|RS3A_HUMAN RecName: Full=40S ribosomal protein S3a; AltName: Full=v-fos
transformation effector protein; Short=Fte-1
gi|75060390|sp|Q56JV9.3|RS3A_BOVIN RecName: Full=40S ribosomal protein S3a
gi|182775|gb|AAA58487.1| v-fos transformation effector protein [Homo sapiens]
gi|292447|gb|AAA60290.1| ribosomal protein S3a [Homo sapiens]
gi|854179|emb|CAA60827.1| ribosomal protein S3a [Homo sapiens]
gi|12652897|gb|AAH00204.1| Ribosomal protein S3A [Homo sapiens]
gi|12804577|gb|AAH01708.1| Ribosomal protein S3A [Homo sapiens]
gi|13436410|gb|AAH04981.1| Ribosomal protein S3A [Homo sapiens]
gi|13623405|gb|AAH06298.1| Ribosomal protein S3A [Homo sapiens]
gi|14327994|gb|AAH09219.1| Ribosomal protein S3A [Homo sapiens]
gi|14424796|gb|AAH09404.1| Ribosomal protein S3A [Homo sapiens]
gi|16877771|gb|AAH17123.1| Ribosomal protein S3A [Homo sapiens]
gi|17512179|gb|AAH19072.1| Ribosomal protein S3A [Homo sapiens]
gi|20988813|gb|AAH30161.1| Ribosomal protein S3A [Homo sapiens]
gi|47682375|gb|AAH70211.1| Ribosomal protein S3A [Homo sapiens]
gi|48735352|gb|AAH71916.1| Ribosomal protein S3A [Homo sapiens]
gi|58760456|gb|AAW82136.1| ribosomal protein S3a [Bos taurus]
gi|74267633|gb|AAI02790.1| Ribosomal protein S3A [Bos taurus]
gi|90075356|dbj|BAE87358.1| unnamed protein product [Macaca fascicularis]
gi|90076792|dbj|BAE88076.1| unnamed protein product [Macaca fascicularis]
gi|119625396|gb|EAX04991.1| ribosomal protein S3A, isoform CRA_d [Homo sapiens]
gi|119625400|gb|EAX04995.1| ribosomal protein S3A, isoform CRA_d [Homo sapiens]
gi|123980480|gb|ABM82069.1| ribosomal protein S3A [synthetic construct]
gi|123995293|gb|ABM85248.1| ribosomal protein S3A [synthetic construct]
gi|154426154|gb|AAI51409.1| Ribosomal protein S3A [Bos taurus]
gi|189053109|dbj|BAG34731.1| unnamed protein product [Homo sapiens]
gi|208967332|dbj|BAG73680.1| ribosomal protein S3A [synthetic construct]
gi|296478792|tpg|DAA20907.1| TPA: 40S ribosomal protein S3a [Bos taurus]
gi|327239240|gb|AEA39487.1| ribosomal protein S3A [Ailuropoda melanoleuca]
gi|327239332|gb|AEA39533.1| ribosomal protein S3A [Ailuropoda melanoleuca]
gi|351712495|gb|EHB15414.1| 40S ribosomal protein S3a [Heterocephalus glaber]
gi|355687651|gb|EHH26235.1| hypothetical protein EGK_16152 [Macaca mulatta]
gi|431918276|gb|ELK17503.1| 40S ribosomal protein S3a [Pteropus alecto]
gi|440900442|gb|ELR51585.1| 40S ribosomal protein S3a [Bos grunniens mutus]
Length = 264
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|306553|gb|AAA35682.1| ribosmal protein small subunit [Homo sapiens]
Length = 264
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSXKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|358400413|gb|EHK49744.1| hypothetical protein TRIATDRAFT_297633 [Trichoderma atroviride IMI
206040]
Length = 256
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/233 (62%), Positives = 182/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 22 DPFTRKDWYSIKAPNPFNIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLR ++VQGK+ LTNF G+ FT+DKLRSLVRKW TLIEA + VKTTD++ +RLF I
Sbjct: 82 RKVRLRVDEVQGKSCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM +I+ +A+SC L LV K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTDIITREASSCTLTQLVSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LKAPKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
>gi|310792643|gb|EFQ28170.1| ribosomal S3Ae family protein [Glomerella graminicola M1.001]
Length = 256
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 180/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFTRKDWYQIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRILEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLTQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK PKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALMGLHGESGTDDQGQKVEREFKERVLE 254
>gi|90076494|dbj|BAE87927.1| unnamed protein product [Macaca fascicularis]
Length = 264
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|47117870|sp|P61246.1|RS3A_FELCA RecName: Full=40S ribosomal protein S3a
gi|950113|gb|AAB01669.1| ribosomal protein S3a, partial [Felis catus]
Length = 260
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 19 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 77
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 78 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 137
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 138 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 197
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 198 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 257
Query: 233 EA 234
E+
Sbjct: 258 ES 259
>gi|67903766|ref|XP_682139.1| hypothetical protein AN8870.2 [Aspergillus nidulans FGSC A4]
gi|74656798|sp|Q5AS60.1|RS3A_EMENI RecName: Full=40S ribosomal protein S1
gi|40740968|gb|EAA60158.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259482908|tpe|CBF77833.1| TPA: 40S ribosomal protein S3Ae (AFU_orthologue; AFUA_5G05450)
[Aspergillus nidulans FGSC A4]
Length = 256
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 182/234 (77%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAPS F R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 22 DPFTRKDEYSVKAPSTFANRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQGDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREASSCSLAQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQ+V IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 202 QGIYPLQHVHIRKVKLLKSPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
>gi|340516132|gb|EGR46382.1| hypothetical protein TRIREDRAFT_80484 [Trichoderma reesei QM6a]
Length = 256
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/231 (63%), Positives = 181/231 (78%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 22 DPFTRKDWYSIKAPNPFNIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA + VKTTD++ +RLF I
Sbjct: 82 RKVRLRIDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM +I+ +A+SC L LV K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLVSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPI 231
IYPLQNV IRKVK+LKAPKFDLG LM +HG+ ++D G KV+R E +
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALMALHGESGTDDQGQKVEREFKERV 252
>gi|325183243|emb|CCA17701.1| 40S ribosomal protein S3a putative [Albugo laibachii Nc14]
gi|325183889|emb|CCA18347.1| 40S ribosomal protein S3a putative [Albugo laibachii Nc14]
Length = 261
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 142/230 (61%), Positives = 176/230 (76%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY+I+AP+ F R VGKTLV R+ G K A +GLK RVFEV L DL +EE ++
Sbjct: 22 DPFTRKDWYEIRAPAIFSERTVGKTLVNRSTGLKSAIDGLKGRVFEVCLADLNKDEEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRL A+D+QG ++T F GM FT DKL SL+RKW TLIEA+VDVKTTD + +RLFCI
Sbjct: 82 RKIRLSADDIQGSQIITGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+TCYAQ++Q+R IR+KM IM +A+ CD+K L KF+ E+IG+EIEKAT
Sbjct: 142 FTKRRPNQIKKTCYAQSAQVRAIRKKMVHIMTEEASKCDIKDLFLKFVPEIIGKEIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPI 231
IYPLQNV IRK KILK PKFDL +LME+H SED G KV + D+ +
Sbjct: 202 QGIYPLQNVCIRKAKILKKPKFDLVRLMELHEGGSEDKGAKVGKKEDQMV 251
>gi|395848746|ref|XP_003797009.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Otolemur
garnettii]
Length = 264
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSIVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|116199295|ref|XP_001225459.1| 40S ribosomal protein S1 [Chaetomium globosum CBS 148.51]
gi|88179082|gb|EAQ86550.1| 40S ribosomal protein S3aE [Chaetomium globosum CBS 148.51]
Length = 254
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 20 DPFTRKDWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V V TTD++ LRLF I
Sbjct: 80 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVMTTDHYLLRLFAIA 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA TSQIR IRRKM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 140 FTKRRPNQIKKTTYAATSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKAT 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG LM +HG+ S D G KV+R E + E+
Sbjct: 200 QGIYPLQNVHIRKVKLLKQPKFDLGALMTLHGESSTDEQGQKVEREFREQVLES 253
>gi|281350953|gb|EFB26537.1| hypothetical protein PANDA_001716 [Ailuropoda melanoleuca]
Length = 243
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 2 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 60
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 61 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 120
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 121 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 181 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 240
Query: 233 EA 234
E+
Sbjct: 241 ES 242
>gi|342887837|gb|EGU87266.1| hypothetical protein FOXB_02248 [Fusarium oxysporum Fo5176]
Length = 256
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 22 DPFSRKDWYSIKAPNPFNVRDVGKTLVNRTTGLKNANDALKGRILEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLR ++VQGKN LT F G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I
Sbjct: 82 RKVRLRVDEVQGKNCLTAFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVK+T YA +SQIR IRRKM +I+ +A+SC L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQVKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LKAPKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
>gi|395848748|ref|XP_003797010.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Otolemur
garnettii]
Length = 272
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSIVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|378731061|gb|EHY57520.1| 40S ribosomal protein S1 [Exophiala dermatitidis NIH/UT8656]
Length = 257
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/232 (62%), Positives = 176/232 (75%), Gaps = 1/232 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY I APS F R+VGKTLV R+ G K A++ LK R+ EVSL DL N+E+H++
Sbjct: 22 DPFTRKDWYSIAAPSTFNTRDVGKTLVNRSTGLKSANDALKGRIIEVSLADLQNDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGK LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I
Sbjct: 82 RKVKLRVDEVQGKKCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM +I+ +A S L L K I EVIGREIEK T
Sbjct: 142 FTKRRPNQIKKTTYAQSSQIRAIRKKMTDIIQREATSVTLAQLTGKLIPEVIGREIEKTT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPIP 232
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ E D G KV+R EP P
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALLALHGESGENDAGQKVEREFKEPAP 253
>gi|149617758|ref|XP_001514859.1| PREDICTED: 40S ribosomal protein S3a-like [Ornithorhynchus
anatinus]
Length = 264
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VD+KTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDIKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMTEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSGSSKPSGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|357017591|gb|AET50824.1| hypothetical protein [Eimeria tenella]
Length = 260
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 180/223 (80%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WYD+KAPS F+ RN GKTLVT++ GTK+A + L+ RV+EV+L DL +E+
Sbjct: 21 GDPFLKKEWYDLKAPSLFQQRNFGKTLVTKSAGTKLAVDSLRGRVYEVNLADLNLDEDQG 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+L+ E++QG++ LT+F GM+ T DKL SL+RKWH+LIEA+VDV+T D +TLR+FCI
Sbjct: 81 FRKIKLQCEEIQGRSCLTDFHGMNITRDKLCSLIRKWHSLIEAFVDVQTVDGYTLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FT+R PNQ+K TCYA++SQIR IR+KM IM A+A+ C L+ LV+KFI E IG+ IE A
Sbjct: 141 AFTERRPNQIKSTCYARSSQIRAIRKKMVSIMAAEASKCQLRDLVKKFIPESIGKSIEAA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
SI+PLQNV IRKVK++K PKFDL KLME+HG+ SEDVG KV
Sbjct: 201 CRSIFPLQNVLIRKVKVIKKPKFDLTKLMELHGETSEDVGKKV 243
>gi|444709410|gb|ELW50426.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 320
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 79 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 137
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 138 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 197
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 198 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 257
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 258 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 317
Query: 233 EA 234
E+
Sbjct: 318 ES 319
>gi|59802924|gb|AAX07667.1| 40S ribosomal protein S1-like protein [Magnaporthe grisea]
Length = 256
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/233 (63%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWY IKAP+ F +R+VGKTLV R+ G K A++ LK R+FEVSL DL +E+HA+
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
TKR PNQ+K+T YA +SQIR IRRKM EI+ +A++C L+ L K I EVIGREIEKAT
Sbjct: 142 VTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK PKFDLG L+ +HG+ + D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGESTTDEQGQKVEREFKERVLE 254
>gi|254553321|ref|NP_058655.3| 40S ribosomal protein S3a [Mus musculus]
gi|3122836|sp|P97351.3|RS3A_MOUSE RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
TU-11
gi|1841932|emb|CAB05955.1| ribosomal protein S3a [Mus musculus]
gi|12846166|dbj|BAB27055.1| unnamed protein product [Mus musculus]
gi|12849026|dbj|BAB28176.1| unnamed protein product [Mus musculus]
gi|25123233|gb|AAH39659.1| Ribosomal protein S3A [Mus musculus]
gi|26341358|dbj|BAC34341.1| unnamed protein product [Mus musculus]
gi|26353044|dbj|BAC40152.1| unnamed protein product [Mus musculus]
gi|51980695|gb|AAH81451.1| Ribosomal protein S3A [Mus musculus]
gi|54035544|gb|AAH83338.1| Ribosomal protein S3A [Mus musculus]
gi|54261533|gb|AAH84675.1| Ribosomal protein S3A [Mus musculus]
gi|74138210|dbj|BAE28594.1| unnamed protein product [Mus musculus]
gi|74178144|dbj|BAE29859.1| unnamed protein product [Mus musculus]
gi|74178180|dbj|BAE29877.1| unnamed protein product [Mus musculus]
gi|74179693|dbj|BAE22486.1| unnamed protein product [Mus musculus]
gi|74195547|dbj|BAE39587.1| unnamed protein product [Mus musculus]
gi|74195635|dbj|BAE39625.1| unnamed protein product [Mus musculus]
gi|74204579|dbj|BAE35361.1| unnamed protein product [Mus musculus]
gi|74207330|dbj|BAE30849.1| unnamed protein product [Mus musculus]
gi|74212051|dbj|BAE40190.1| unnamed protein product [Mus musculus]
gi|74219586|dbj|BAE29563.1| unnamed protein product [Mus musculus]
gi|77415518|gb|AAI06116.1| Ribosomal protein S3A [Mus musculus]
gi|148683437|gb|EDL15384.1| mCG1128, isoform CRA_c [Mus musculus]
Length = 264
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|402217566|gb|EJT97646.1| 40S ribosomal protein S1 [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 184/232 (79%), Gaps = 3/232 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDW+D+KAPS F V+N GKTL R+QG K +++ LK RV E+SLGDL +EE ++
Sbjct: 22 DPFSRKDWFDVKAPSVFEVKNAGKTLANRSQGLKNSADSLKGRVIELSLGDLNKDEESSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++V GKN LT+F GM FT+DKLRSLVRKW +LIEA+VDVKTTD + +R+F I
Sbjct: 82 RKIKLRIDEVAGKNCLTSFHGMDFTSDKLRSLVRKWQSLIEAHVDVKTTDGYLIRMFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R P QV++T YAQ++QIR+IR+KM EIM +A++CD+K LV+KFI E IGREIEKA
Sbjct: 142 FTRRRPTQVRKTTYAQSAQIREIRKKMFEIMTREASNCDMKELVQKFIPEAIGREIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEP 230
SIYPLQNV+IRK KILK+PK+D KL+E+HG +++ G KV + EP
Sbjct: 202 KSIYPLQNVYIRKAKILKSPKYDPSKLLELHGGEAAAADETGAKVAKEFKEP 253
>gi|344291732|ref|XP_003417586.1| PREDICTED: 40S ribosomal protein S3a-like [Loxodonta africana]
Length = 264
Score = 302 bits (773), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDV+TTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVRTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|8394221|ref|NP_058849.1| 40S ribosomal protein S3a [Rattus norvegicus]
gi|354484084|ref|XP_003504221.1| PREDICTED: 40S ribosomal protein S3a-like [Cricetulus griseus]
gi|1350987|sp|P49242.2|RS3A_RAT RecName: Full=40S ribosomal protein S3a; AltName: Full=V-fos
transformation effector protein; Contains: RecName:
Full=40S ribosomal protein S3b
gi|207649|gb|AAA42335.1| v-fos transformation effector protein [Rattus norvegicus]
gi|495140|emb|CAA53004.1| rat ribosomal protein S3a [Rattus norvegicus]
gi|37231726|gb|AAH58483.1| Ribosomal protein S3a [Rattus norvegicus]
gi|149048220|gb|EDM00796.1| rCG62728, isoform CRA_a [Rattus norvegicus]
gi|344247943|gb|EGW04047.1| 40S ribosomal protein S3a [Cricetulus griseus]
Length = 264
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|390475274|ref|XP_003734928.1| PREDICTED: 40S ribosomal protein S3a-like [Callithrix jacchus]
Length = 264
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTHDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IE+A
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIERAR 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKNPKFELGKLMELHGEGSSSGKATGDETGAKVERTDGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|119625394|gb|EAX04989.1| ribosomal protein S3A, isoform CRA_b [Homo sapiens]
Length = 244
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 176/217 (81%), Gaps = 1/217 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A
Sbjct: 22 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-A 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE 217
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ SE
Sbjct: 201 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSE 237
>gi|395542553|ref|XP_003773191.1| PREDICTED: 40S ribosomal protein S3a [Sarcophilus harrisii]
Length = 440
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/231 (62%), Positives = 181/231 (78%), Gaps = 8/231 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 199 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 257
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 258 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 317
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 318 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 377
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDR 225
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R
Sbjct: 378 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGTKVER 428
>gi|410917986|ref|XP_003972467.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Takifugu
rubripes]
Length = 266
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/244 (60%), Positives = 187/244 (76%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RV+EVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLIAEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKRRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---------SEDVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KV+R + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGSAAKAPGDDTGAKVERADGYEPP 261
Query: 231 IPEA 234
I E+
Sbjct: 262 IQES 265
>gi|82200468|sp|Q6DV02.3|RS3A_GECJA RecName: Full=40S ribosomal protein S3a
Length = 264
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/231 (62%), Positives = 182/231 (78%), Gaps = 8/231 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG+++EKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
>gi|291412192|ref|XP_002722368.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
Length = 264
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKCNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|358056327|dbj|GAA97694.1| hypothetical protein E5Q_04372 [Mixia osmundae IAM 14324]
Length = 258
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/235 (62%), Positives = 181/235 (77%), Gaps = 2/235 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDW+DIKAPS F RN GKTLV R+QG K A++GLK RV E+SL DL ++E ++
Sbjct: 22 DPFSRKDWFDIKAPSMFETRNAGKTLVNRSQGMKNAADGLKGRVIELSLADLNKDDEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++V GKN LTNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRIDEVNGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFTIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ +QV++T YA++SQ+R IR KM EIM+ ++ SCDLK LV KF+ EVIGREIEK+
Sbjct: 142 FTKKRQSQVRKTTYAKSSQVRAIRAKMFEIMIRESNSCDLKELVAKFVPEVIGREIEKSC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY--SEDVGVKVDRPADEPIPEA 234
IYPLQNV++RKVKILKAPK+D L +HG+ S + G KV EP P A
Sbjct: 202 QGIYPLQNVYVRKVKILKAPKYDQSVLFGLHGESTGSGETGAKVGAEFKEPAPLA 256
>gi|367037519|ref|XP_003649140.1| 40S ribosomal protein S1 [Thielavia terrestris NRRL 8126]
gi|346996401|gb|AEO62804.1| hypothetical protein THITE_2107421 [Thielavia terrestris NRRL 8126]
Length = 256
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/234 (62%), Positives = 181/234 (77%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDW+ IKAP+ F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+H++
Sbjct: 22 DPFSRKDWFAIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V V TTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVMTTDHYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A+SC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG LM +HG+ S D G KV+R E + ++
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALMALHGESSTDEQGQKVEREFREQVLDS 255
>gi|327274060|ref|XP_003221796.1| PREDICTED: 40S ribosomal protein S3a-like [Anolis carolinensis]
Length = 264
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 187/242 (77%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ S++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSSDEAGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|291401880|ref|XP_002717293.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
Length = 264
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/231 (62%), Positives = 180/231 (77%), Gaps = 8/231 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNNEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKCNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDTIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
SIYPL +VF+RKVK+LK PKF+LGK ME+HG+ S ++ G KV+R
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKFMELHGEGSSSGKATGDETGAKVER 252
>gi|213514340|ref|NP_001134789.1| 40S ribosomal protein S3a [Salmo salar]
gi|269969608|sp|B5DGL6.1|RS3A_SALSA RecName: Full=40S ribosomal protein S3a
gi|197632333|gb|ACH70890.1| V-Fos transformation effector (ribosomal protein S3A ) [Salmo
salar]
gi|209731092|gb|ACI66415.1| 40S ribosomal protein S3a [Salmo salar]
gi|209732348|gb|ACI67043.1| 40S ribosomal protein S3a [Salmo salar]
gi|209736032|gb|ACI68885.1| 40S ribosomal protein S3a [Salmo salar]
gi|209738060|gb|ACI69899.1| 40S ribosomal protein S3a [Salmo salar]
gi|223646322|gb|ACN09919.1| 40S ribosomal protein S3a [Salmo salar]
gi|223672169|gb|ACN12266.1| 40S ribosomal protein S3a [Salmo salar]
gi|303661264|gb|ADM16028.1| 40S ribosomal protein S3a [Salmo salar]
Length = 266
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 186/243 (76%), Gaps = 12/243 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLV+RTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVSRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L +EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLISEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKVDRPA--DEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KVDR + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSSAAKPSGDDTGAKVDRADGYEPP 261
Query: 231 IPE 233
I E
Sbjct: 262 IQE 264
>gi|332236964|ref|XP_003267670.1| PREDICTED: 40S ribosomal protein S3a-like [Nomascus leucogenys]
Length = 264
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|75075866|sp|Q4R4Z6.3|RS3A_MACFA RecName: Full=40S ribosomal protein S3a
gi|67970974|dbj|BAE01829.1| unnamed protein product [Macaca fascicularis]
Length = 264
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK VFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|163658469|gb|ABY28374.1| ribosomal protein S3a [Oncorhynchus masou formosanus]
Length = 266
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 186/244 (76%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLV+RTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVSRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L +EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLISEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKVDRPA--DEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KVDR + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSSTAKPSGDDTGAKVDRADGYEPP 261
Query: 231 IPEA 234
I E
Sbjct: 262 IQET 265
>gi|46126205|ref|XP_387656.1| hypothetical protein FG07480.1 [Gibberella zeae PH-1]
gi|408391066|gb|EKJ70450.1| hypothetical protein FPSE_09444 [Fusarium pseudograminearum CS3096]
Length = 256
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/233 (63%), Positives = 181/233 (77%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 22 DPFSRKDWYSIKAPNPFNVRDVGKTLVNRTTGLKNANDALKGRILEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLR ++VQGKN LT F G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF IG
Sbjct: 82 RKVRLRVDEVQGKNCLTAFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YA +SQIR IRRKM +I+ +A+SC L L K I EVIGREIEK+T
Sbjct: 142 FTKRRGNQVKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LKAPKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
>gi|358377453|gb|EHK15137.1| hypothetical protein TRIVIDRAFT_83608 [Trichoderma virens Gv29-8]
Length = 256
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/233 (62%), Positives = 182/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 22 DPFTRKDWYSIKAPNPFNIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RLR ++VQGK+ LTNF G+ FT+DKLRSLVRKW TLIEA + VKTTD++ +RLF I
Sbjct: 82 RKVRLRVDEVQGKSCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLIRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM +I+ +A+SC L LV K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLVSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK+PKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
>gi|126331309|ref|XP_001366653.1| PREDICTED: 40S ribosomal protein S3a-like [Monodelphis domestica]
Length = 264
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGTKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|346974508|gb|EGY17960.1| 40S ribosomal protein S3a-2 [Verticillium dahliae VdLs.17]
Length = 256
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/233 (62%), Positives = 182/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFSRKDWYQIKAPAPFAVRDVGKTLVNRTTGLKNANDALKGRILEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R PNQVK+T YA +SQIR IRRKM EI+ +A++C L L K I EVIGREIEK+T
Sbjct: 142 FTRRRPNQVKKTTYAASSQIRAIRRKMVEIIQREASTCTLTQLTNKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK+PKFDLG LM +HG+ +++ G K++R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKSPKFDLGSLMALHGESVTDEQGQKIEREFKERVLE 254
>gi|12833651|dbj|BAB22611.1| unnamed protein product [Mus musculus]
Length = 264
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 185/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFELITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|3914914|sp|O43999.3|RS3A_EIMTE RecName: Full=40S ribosomal protein S3a; AltName: Full=EtS3a
gi|2792508|gb|AAD08643.1| ribosomal protein S3a [Eimeria tenella]
Length = 264
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|242014939|ref|XP_002428136.1| 40S ribosomal protein S3A, putative [Pediculus humanus corporis]
gi|212512679|gb|EEB15398.1| 40S ribosomal protein S3A, putative [Pediculus humanus corporis]
Length = 263
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/240 (60%), Positives = 182/240 (75%), Gaps = 7/240 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F R +GKTLV RTQGTKIASEGLK+RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFATRQIGKTLVNRTQGTKIASEGLKNRVFEVSLADLQNDTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA+VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEAHVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + K+TCYAQ +Q+R IR+KM EI+ + DLK +V+K + + I +EIEK
Sbjct: 143 IGFTNKDQMSQKKTCYAQHTQVRAIRKKMTEIITKEVTDSDLKDVVQKLLPDSIAKEIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKVDRPA--DEPIPEA 234
IYPL +V+IRKVK+LK P+FDL KL+E+HGD S++ G KVDRP + P+ E+
Sbjct: 203 YCQKIYPLHDVYIRKVKVLKKPRFDLSKLLELHGDSKAASDEPGAKVDRPKGYEPPVQES 262
>gi|74191644|dbj|BAE30393.1| unnamed protein product [Mus musculus]
Length = 264
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+G+TLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGRTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|326918421|ref|XP_003205487.1| PREDICTED: 40S ribosomal protein S3a-like [Meleagris gallopavo]
Length = 264
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKASGDEAGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|296198686|ref|XP_002746821.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Callithrix
jacchus]
gi|390461859|ref|XP_003732749.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Callithrix
jacchus]
gi|390461862|ref|XP_003732750.1| PREDICTED: 40S ribosomal protein S3a-like isoform 3 [Callithrix
jacchus]
Length = 264
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+ +T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIWKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|82274125|sp|Q4T8S6.3|RS3A_TETNG RecName: Full=40S ribosomal protein S3a
gi|47209366|emb|CAF90706.1| unnamed protein product [Tetraodon nigroviridis]
Length = 266
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/244 (59%), Positives = 186/244 (76%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RV+EVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKRRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KV+R + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERADGYEPP 261
Query: 231 IPEA 234
I E+
Sbjct: 262 IQES 265
>gi|296205013|ref|XP_002749579.1| PREDICTED: 40S ribosomal protein S3a-like [Callithrix jacchus]
Length = 261
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 185/240 (77%), Gaps = 9/240 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+G K RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGHKGRVFEVSLADLENDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T++EA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMVEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K IA+ IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVSKLIADSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPADEPIPEA 234
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K D + P+ E+
Sbjct: 202 HSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKAD-GYEPPVQES 260
>gi|74226830|dbj|BAE27060.1| unnamed protein product [Mus musculus]
Length = 264
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 185/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E +
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVE-F 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|129270064|ref|NP_001075886.1| ribosomal protein S3A [Gallus gallus]
Length = 264
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|449266603|gb|EMC77645.1| 40S ribosomal protein S3a, partial [Columba livia]
Length = 243
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 2 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 60
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 61 RKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 120
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIRRKM EIM + + DLK +V K I + IG++IEKA
Sbjct: 121 FTKKRNNQIRKTSYAQHQQVRQIRRKMMEIMNREVQTNDLKEVVNKLIPDSIGKDIEKAC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 181 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGTKVERADGYEPPVQ 240
Query: 233 EA 234
E+
Sbjct: 241 ES 242
>gi|344264483|ref|XP_003404321.1| PREDICTED: 40S ribosomal protein S3a-like [Loxodonta africana]
Length = 264
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL NEE A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNEEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDV+TTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVRTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K + IG++IE+A
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLTPDSIGKDIEEAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|310703619|ref|NP_001185510.1| 40S ribosomal protein S3a [Taeniopygia guttata]
gi|269969612|sp|B5FZS9.1|RS3A_TAEGU RecName: Full=40S ribosomal protein S3a
gi|197128042|gb|ACH44540.1| putative ribosomal protein S3a [Taeniopygia guttata]
gi|197128043|gb|ACH44541.1| putative ribosomal protein S3a [Taeniopygia guttata]
Length = 264
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGTKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|156551529|ref|XP_001601315.1| PREDICTED: 40S ribosomal protein S3a-like [Nasonia vitripennis]
Length = 267
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 182/244 (74%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F +R VGKTLV RTQGTKIASEGLKHRVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSVFTLRQVGKTLVNRTQGTKIASEGLKHRVFEVSLADLQSDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD ++LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEAVVDVKTTDGYSLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + P ++TCYAQ +Q+R IRRKM E++ + DLK +V K + + I ++IEK
Sbjct: 143 IGFTNKDPQSSRKTCYAQHAQVRSIRRKMVELITDEVNKSDLKGVVSKLLPDAIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEP 230
A IYPL +V+IRKVK+LK P+F+L KL+E+HGD + G KV+RP + P
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGSAKGGEGGETGSKVERPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|295657106|ref|XP_002789126.1| 40S ribosomal protein S1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|269969594|sp|C1HDW2.1|RS3A_PARBA RecName: Full=40S ribosomal protein S1
gi|269969595|sp|C1GGT8.1|RS3A_PARBD RecName: Full=40S ribosomal protein S1
gi|269969636|sp|C0SH35.2|RS3A_PARBP RecName: Full=40S ribosomal protein S1
gi|226284540|gb|EEH40106.1| 40S ribosomal protein S3aE [Paracoccidioides sp. 'lutzii' Pb01]
gi|226295026|gb|EEH50446.1| 40S ribosomal protein S3aE [Paracoccidioides brasiliensis Pb18]
Length = 255
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/234 (63%), Positives = 183/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ +A + L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 HGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLES 254
>gi|152940813|gb|ABS44871.1| ribosomal protein S3Ae [Pteromalus puparum]
Length = 249
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 182/244 (74%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F +R VGKTLV RTQGTKIASEGLKHRVFEVSL DL N+ E
Sbjct: 5 DPFTRKDWYDVKAPSVFTLRQVGKTLVNRTQGTKIASEGLKHRVFEVSLADLQSDNDAER 64
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD ++LR+FC
Sbjct: 65 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEAVVDVKTTDGYSLRVFC 124
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + P ++TCYAQ +Q+R IRRKM E++ + DLK +V K + + I ++IEK
Sbjct: 125 IGFTNKDPQSSRKTCYAQHAQVRSIRRKMVELITDEVNKSDLKGVVSKLLPDAIAKDIEK 184
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEP 230
A IYPL +V+IRKVK+LK P+F+L KL+E+HGD + G KV+RP + P
Sbjct: 185 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGSAKGGEGGETGSKVERPEGYEPP 244
Query: 231 IPEA 234
+ E+
Sbjct: 245 VQES 248
>gi|345567279|gb|EGX50213.1| hypothetical protein AOL_s00076g288 [Arthrobotrys oligospora ATCC
24927]
Length = 256
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 181/234 (77%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KDWY++KAPS F+VR+ GKTLV RT G K A++ LK RVFEVSL DL +E H++
Sbjct: 22 DPFKNKDWYNLKAPSMFQVRDAGKTLVNRTTGLKNANDALKGRVFEVSLADLQKDEGHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQG+N LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF IG
Sbjct: 82 RKIKLRTDEVQGRNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R PNQ+K+T YAQ+SQIR IR+KM EI+ +A+SC L L K I EVI REIEKA
Sbjct: 142 FTSRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREASSCTLAQLTTKLIPEVIEREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
SIYPL++V +RKVK+LK PKFDLG L+ +HGD ++D G KV+R E + E+
Sbjct: 202 QSIYPLKDVHVRKVKLLKQPKFDLGALLGLHGDSTTDDSGQKVEREFKEKVLES 255
>gi|269969611|sp|A2Q0R8.1|RS3A_SOLSE RecName: Full=40S ribosomal protein S3a
gi|124300791|dbj|BAF45891.1| ribosomal protein S3a [Solea senegalensis]
Length = 266
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 185/244 (75%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KV+R + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGTGTATKATGDDTGAKVERADGYEPP 261
Query: 231 IPEA 234
I E
Sbjct: 262 IQET 265
>gi|291394577|ref|XP_002713774.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
Length = 264
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF M T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHSMDLTWDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|225715376|gb|ACO13534.1| 40S ribosomal protein S3a [Esox lucius]
Length = 265
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/243 (59%), Positives = 186/243 (76%), Gaps = 11/243 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLV+RTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVSRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L +EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLISEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDRP--ADEPI 231
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KV+R + PI
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSVAKPSGDDTGAKVERADGYEPPI 261
Query: 232 PEA 234
E
Sbjct: 262 QET 264
>gi|229367694|gb|ACQ58827.1| 40S ribosomal protein S3a [Anoplopoma fimbria]
Length = 266
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 185/243 (76%), Gaps = 12/243 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKMIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KV+R + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGASSAAKPTGDDTGAKVERADGYEPP 261
Query: 231 IPE 233
I E
Sbjct: 262 IQE 264
>gi|74151983|dbj|BAE32029.1| unnamed protein product [Mus musculus]
Length = 264
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/241 (60%), Positives = 185/241 (76%), Gaps = 10/241 (4%)
Query: 3 PFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYR 62
PF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+R
Sbjct: 24 PFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFR 82
Query: 63 KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGF 122
K +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GF
Sbjct: 83 KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 142
Query: 123 TKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
TK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 143 TKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 202
Query: 183 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIPE 233
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+ E
Sbjct: 203 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYEPPVQE 262
Query: 234 A 234
+
Sbjct: 263 S 263
>gi|400596156|gb|EJP63940.1| ribosomal S3Ae family protein [Beauveria bassiana ARSEF 2860]
Length = 256
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/233 (62%), Positives = 182/233 (78%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 22 DPFSRKDWYSIKAPNPFNIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLR ++VQGK+ LTNF G+ FT+DKLRSLVRKW +LIEA + VKTTD++ +RLF IG
Sbjct: 82 RKIRLRIDEVQGKSCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLIRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YA +SQIR IRRKM +I+ +A++C L L K I EVIGREIEKAT
Sbjct: 142 FTKRRQNQIKKTTYAASSQIRAIRRKMTDIIQREASTCTLTQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LKAPKFDLG LM +HG+ ++D G KV+R E + E
Sbjct: 202 QGIYPLQNVHIRKVKLLKAPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
>gi|402879892|ref|XP_003903556.1| PREDICTED: 40S ribosomal protein S3a-like [Papio anubis]
Length = 264
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ QIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVHQIRKKMMEIMTREVQTNDLKEVVNKLIPDNIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+R+VK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRRVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|291398160|ref|XP_002715762.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
Length = 264
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 183/242 (75%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFE SL DL N E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEASLADLQNNEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKTCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGNETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|56118686|ref|NP_001008075.1| 40S ribosomal protein S3a [Xenopus (Silurana) tropicalis]
gi|82198055|sp|Q642T2.3|RS3A_XENTR RecName: Full=40S ribosomal protein S3a
gi|51895858|gb|AAH80969.1| rps3a protein [Xenopus (Silurana) tropicalis]
gi|89272935|emb|CAJ83216.1| ribosomal protein S3A [Xenopus (Silurana) tropicalis]
Length = 264
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|298706370|emb|CBJ29379.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 257
Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 146/221 (66%), Positives = 174/221 (78%), Gaps = 1/221 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP K+WYDIKAPS F+VRN GKTLVTRT+GTKIASEGLK RVFE SLGDL +E+ Y
Sbjct: 21 DPMTLKEWYDIKAPSIFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNADEDLGY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++L EDVQG +VLTNF GM T DKL SL++KW TLIE VDV+TTD + LR+ CIG
Sbjct: 81 RKVKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEGQVDVRTTDGYLLRISCIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+K+TCYAQ SQIR +R+KM +IM +A+ CDL+ LV KFI E I EI KA
Sbjct: 141 FTKKQDNQIKQTCYAQASQIRAVRKKMCDIMSEEASKCDLRELVLKFIPENISGEILKAV 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGV 221
SIYP+QNV+IRKVK LK PKFDL KLME+HGD +ED+G+
Sbjct: 201 QSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDIGM 241
>gi|385302987|gb|EIF47090.1| 40s ribosomal protein s3ae [Dekkera bruxellensis AWRI1499]
Length = 255
Score = 299 bits (765), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 177/223 (79%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAP+ F RN+GKTL+ R+ G K A++GLK RVFE +L DL E+HA+
Sbjct: 22 DPFTRKEWYDIKAPTTFENRNMGKTLINRSTGLKSAADGLKGRVFEFNLADLQGSEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+K++LR +DVQGKN+LTNF G+ FTTDKL+SLVRKW +L+EA V VKT+D++ LR+FCIG
Sbjct: 82 KKVKLRVDDVQGKNLLTNFHGLDFTTDKLKSLVRKWQSLVEANVTVKTSDDYVLRVFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ+SQ++Q+R+KM EIM + ++C L L K I E IGREIEKA
Sbjct: 142 FTKRQANQIKKTTYAQSSQLKQVRKKMMEIMTKEVSNCTLAQLTGKLIPEAIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKV 223
S +PLQNV+IRKVK+LK PKFDLG L+ +HG+ +E D G KV
Sbjct: 202 QSTFPLQNVYIRKVKLLKQPKFDLGNLLALHGEATENDKGKKV 244
>gi|321248785|ref|XP_003191240.1| 40s ribosomal protein s3ae-a (s1-a) [Cryptococcus gattii WM276]
gi|317457707|gb|ADV19453.1| 40s ribosomal protein s3ae-a (s1-a), putative [Cryptococcus gattii
WM276]
Length = 259
Score = 299 bits (765), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 142/233 (60%), Positives = 179/233 (76%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAPS F RN GKTLV RTQG K A++ LK RV E+SL DL N++E ++
Sbjct: 22 DPFSRKEWYDIKAPSFFENRNAGKTLVNRTQGLKNANDSLKGRVLELSLADLNNDQEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR E+V GKN LT+F+GM FTTDKLRS+VRKW +L+EA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVEEVAGKNCLTSFYGMDFTTDKLRSIVRKWQSLVEAHVDVKTTDGYVLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+SQ+++IR KM EIM +A DLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRQSNQVKKTTYAQSSQLKEIRAKMVEIMRREAEGSDLKELVQKFVPESIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPIPE 233
IYPL NV++RK KI+K PK D+ KL+E HG+ + + G KV + + PE
Sbjct: 202 KGIYPLHNVYVRKAKIVKTPKIDMSKLLESHGEAMNANTGSKVVKSGEFVEPE 254
>gi|41152457|ref|NP_956353.1| 40S ribosomal protein S3a [Danio rerio]
gi|82202567|sp|Q6PBY1.3|RS3A_DANRE RecName: Full=40S ribosomal protein S3a
gi|37747976|gb|AAH59543.1| Ribosomal protein S3A [Danio rerio]
gi|49618935|gb|AAT68052.1| 40S ribosomal protein S3a [Danio rerio]
gi|51258600|gb|AAH78649.1| Ribosomal protein S3A [Danio rerio]
Length = 267
Score = 299 bits (765), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/245 (59%), Positives = 185/245 (75%), Gaps = 13/245 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----------DVGVKVDRP--ADE 229
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ D G KV+R +
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYEP 261
Query: 230 PIPEA 234
PI E+
Sbjct: 262 PIQES 266
>gi|387018382|gb|AFJ51309.1| 40S ribosomal protein S3a [Crotalus adamanteus]
Length = 264
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|392577051|gb|EIW70181.1| hypothetical protein TREMEDRAFT_43796 [Tremella mesenterica DSM
1558]
Length = 260
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 173/213 (81%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAPS F VRNVGKTLV R+QG K A++ LK RV E+SL DL N++E ++
Sbjct: 22 DPFSRKEWYDIKAPSFFEVRNVGKTLVNRSQGLKNANDSLKGRVIELSLADLNNDQEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDV GKN LT+F+GM FTTDKLRS+VRKW TLIEA VDV+TTD + LRLF IG
Sbjct: 82 RKIKLRIEDVSGKNCLTSFFGMDFTTDKLRSIVRKWQTLIEASVDVRTTDGYVLRLFSIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+SQIR+IR KM EIM +A DLK LV+KF+ E IGREIEKA+
Sbjct: 142 FTKRAINQVKKTTYAQSSQIREIRAKMVEIMRREAEGGDLKELVQKFVPESIGREIEKAS 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+I+PL NV+IRK KI++ PK D+ KL+E HG+
Sbjct: 202 RNIFPLHNVYIRKAKIIRVPKMDMSKLLEQHGE 234
>gi|225678619|gb|EEH16903.1| 40S ribosomal protein S3aE-A [Paracoccidioides brasiliensis Pb03]
Length = 256
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/234 (63%), Positives = 183/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 23 DPFSRKDEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAF 82
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 83 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 142
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ +A + L L K I EVIGREIEKAT
Sbjct: 143 FTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 202 HGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLES 255
>gi|148238092|ref|NP_001080325.1| 40S ribosomal protein S3a-A [Xenopus laevis]
gi|82210070|sp|Q801S3.3|RS3AA_XENLA RecName: Full=40S ribosomal protein S3a-A
gi|28958133|gb|AAH47260.1| Rps3a-prov protein [Xenopus laevis]
Length = 264
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|109010317|ref|XP_001099771.1| PREDICTED: 40S ribosomal protein S3a-like [Macaca mulatta]
Length = 264
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 185/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTL+TRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLITRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN TNF GM T DK+ S+V+KW T+IEA+VDVKTTD LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCPTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGHLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|317134909|gb|ADV03017.1| ribosomal protein S3a [Karlodinium veneficum]
Length = 268
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 177/229 (77%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WYD+KAPS F RN GKTLV+RTQGTKIA+E LK RVFEV+L DL +++ A
Sbjct: 22 GDPFLKKEWYDLKAPSVFSTRNCGKTLVSRTQGTKIATEELKGRVFEVNLADLNADDDLA 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++K++L EDVQGKN LT+F GMS T DKL S++RKWHTLIEA+ DVKTTD + +RLF I
Sbjct: 82 FKKVKLCIEDVQGKNCLTDFHGMSLTRDKLASMIRKWHTLIEAHADVKTTDGYVVRLFVI 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR NQ K CYAQ++QIR+IRRKM +I+ A+A L+ LV+K I E IG+EIEK
Sbjct: 142 AFTKRRDNQEKTNCYAQSAQIRKIRRKMIDIINAEAGKVQLRELVKKLIPESIGKEIEKH 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 229
T IYPL++V IRKVKILK PKFD+ KLME+H D ED+G + RP +E
Sbjct: 202 TQGIYPLKDVLIRKVKILKKPKFDITKLMELHQDTGEDMGAEYGRPENE 250
>gi|317134911|gb|ADV03018.1| ribosomal protein S3a [Karlodinium veneficum]
Length = 267
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 177/229 (77%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WYD+KAPS F RN GKTLV+RTQGTKIA+E LK RVFEV+L DL +++ A
Sbjct: 22 GDPFLKKEWYDLKAPSVFSTRNCGKTLVSRTQGTKIATEELKGRVFEVNLADLNADDDLA 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++K++L EDVQGKN LT+F GMS T DKL S++RKWHTLIEA+ DVKTTD + +RLF I
Sbjct: 82 FKKVKLCIEDVQGKNCLTDFHGMSLTRDKLASMIRKWHTLIEAHADVKTTDGYVVRLFVI 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR NQ K CYAQ++QIR+IRRKM +I+ A+A L+ LV+K I E IG+EIEK
Sbjct: 142 AFTKRRDNQEKTNCYAQSAQIRKIRRKMIDIINAEAGKVQLRELVKKLIPESIGKEIEKH 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 229
T IYPL++V IRKVKILK PKFD+ KLME+H D ED+G + RP +E
Sbjct: 202 TQGIYPLKDVLIRKVKILKKPKFDITKLMELHQDTGEDMGAEYGRPENE 250
>gi|440794096|gb|ELR15267.1| 40S ribosomal protein S3a, putative [Acanthamoeba castellanii str.
Neff]
Length = 259
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 183/236 (77%), Gaps = 3/236 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+K+WY+IKAPS FR RNVGKT V +T GTK++ + L R+ EVSL DL +E+ A+
Sbjct: 23 DPFARKEWYNIKAPSVFRSRNVGKTPVNKTAGTKLSQDALLGRIVEVSLADLNKDEDQAF 82
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R I+LR EDVQGK+VLTNF GM+FTTDKLRSLVRKW +LIEA+VDVKTTD + LR+F I
Sbjct: 83 RNIKLRIEDVQGKDVLTNFHGMNFTTDKLRSLVRKWQSLIEAHVDVKTTDGYYLRIFAIA 142
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ KRTCYAQ++QIRQIR KM +I+V ++ + DLK LV KFI E IG+ IE+
Sbjct: 143 FTKRRPNQQKRTCYAQSAQIRQIRAKMVQIIVRESTTVDLKDLVVKFIPEAIGKMIEREC 202
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPIPEA 234
+ I+PL++V+IRKVK+LK PKFD KL E+H +ED+G KV+R + P E+
Sbjct: 203 NGIFPLKDVYIRKVKMLKTPKFDAAKLAELHAGGPAAAEDLGAKVERTEEAPKEES 258
>gi|296193086|ref|XP_002744350.1| PREDICTED: 40S ribosomal protein S3a [Callithrix jacchus]
gi|269969568|sp|B0KW94.1|RS3A_CALJA RecName: Full=40S ribosomal protein S3a
gi|166064951|gb|ABY79117.1| ribosomal protein S3A (predicted) [Callithrix jacchus]
Length = 264
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 185/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL D N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADFQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ QIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKHNNQIRKTSYAQHQQVCQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKIPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|302506400|ref|XP_003015157.1| hypothetical protein ARB_06918 [Arthroderma benhamiae CBS 112371]
gi|302664710|ref|XP_003023982.1| hypothetical protein TRV_01874 [Trichophyton verrucosum HKI 0517]
gi|327301463|ref|XP_003235424.1| 40S ribosomal protein S1 [Trichophyton rubrum CBS 118892]
gi|291178728|gb|EFE34517.1| hypothetical protein ARB_06918 [Arthroderma benhamiae CBS 112371]
gi|291188006|gb|EFE43364.1| hypothetical protein TRV_01874 [Trichophyton verrucosum HKI 0517]
gi|326462776|gb|EGD88229.1| 40S ribosomal protein S1 [Trichophyton rubrum CBS 118892]
Length = 255
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/234 (62%), Positives = 183/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAP+ F+VR+VGKTLV RT G K A++ LK RVFEVSL DL +E H++
Sbjct: 22 DPFTRKDEYLVKAPTTFQVRDVGKTLVNRTTGLKNANDYLKGRVFEVSLADLQKDEAHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLVRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM EIM QA+SC L L K + EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAQSSQIRAIRKKMTEIMQRQASSCTLTQLT-KLVPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + ++
Sbjct: 201 QGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEKVLDS 254
>gi|160420187|ref|NP_001104210.1| 40S ribosomal protein S3a-B [Xenopus laevis]
gi|269969552|sp|A8E604.1|RS3AB_XENLA RecName: Full=40S ribosomal protein S3a-B
gi|157423386|gb|AAI53787.1| LOC100126639 protein [Xenopus laevis]
Length = 264
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 186/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMSREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +V+ RKVK+LK PKF+LGKLME+HG+ +++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYARKVKMLKKPKFELGKLMELHGEGGGSGKPAADETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|150984397|gb|ABR87454.1| small subunit ribosomal protein 1 [Pristionchus sp. 3 CZ3975]
Length = 252
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 179/235 (76%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLMDVHGDSGVATVGADGERVNLPDDYEPP 247
>gi|405965438|gb|EKC30814.1| 40S ribosomal protein S3a [Crassostrea gigas]
Length = 262
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 179/230 (77%), Gaps = 6/230 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F VR +GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E ++
Sbjct: 23 DPFTKKDWYDVKAPSMFVVRQIGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-SF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AE+VQG+NVLTNF GM T DKL S+V+KW T+I+A+VDVKTTD + LR+FCIG
Sbjct: 82 RKFKLMAEEVQGRNVLTNFHGMDLTRDKLCSMVKKWQTMIQAHVDVKTTDGYLLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ QVK+TCYAQT+QI+ IRRKM +I+ + S D+K +V K I + IG++IEKA
Sbjct: 142 FTKKKQFQVKKTCYAQTTQIKTIRRKMVDIITKEVTSNDMKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-----DVGVKVDRP 226
IYPL +VFIRKVK+LK PKFD+GKLME+HG+ D G V RP
Sbjct: 202 QGIYPLHDVFIRKVKVLKKPKFDIGKLMEMHGEGGSKTVITDSGETVARP 251
>gi|449300869|gb|EMC96880.1| hypothetical protein BAUCODRAFT_32626 [Baudoinia compniacensis UAMH
10762]
Length = 257
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/225 (61%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPFA+KDW+++KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL +E+HA
Sbjct: 20 TDPFARKDWFNLKAPSTFNIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHA 79
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++LR ++VQGKN LTNF G+ FT+D++RSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 80 HRKVKLRIDEVQGKNCLTNFHGLDFTSDRIRSLVRKWQTLIEANVVVKTTDDYLLRLFAI 139
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR PNQV++T YA++SQ+R IR+KM +IM +A +C L L K I EVIGREIEK+
Sbjct: 140 AFTKRRPNQVRKTTYARSSQVRAIRKKMMDIMQREAQACSLSQLTTKLIPEVIGREIEKS 199
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVD 224
T IYPLQNV +RKVK+LK PKFDLG L+ +HG+ ++D G KV+
Sbjct: 200 TQGIYPLQNVHVRKVKLLKQPKFDLGNLLSLHGESTTDDSGQKVE 244
>gi|296817307|ref|XP_002848990.1| 40S ribosomal protein S1 [Arthroderma otae CBS 113480]
gi|269969588|sp|C5FIC5.1|RS3A_NANOT RecName: Full=40S ribosomal protein S1
gi|238839443|gb|EEQ29105.1| 40S ribosomal protein S3aE [Arthroderma otae CBS 113480]
Length = 255
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/234 (62%), Positives = 183/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAP+ F+VR+VGKTLV RT G K A++ LK RVFEVSL DL +E H++
Sbjct: 22 DPFTRKDEYLVKAPTTFQVRDVGKTLVNRTTGLKNANDYLKGRVFEVSLADLQKDEAHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLVRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ QA+SC L L K + EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAQSSQIRAIRKKMTEIIQRQASSCTLTQLT-KLVPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 QGIYPLQNVHIRKVKLLKSPKFDLGALLALHGEASTDDKGQKVEREFKEKVLES 254
>gi|326468908|gb|EGD92917.1| 40S ribosomal protein S1 [Trichophyton tonsurans CBS 112818]
gi|326480112|gb|EGE04122.1| 40S ribosomal protein S3aE [Trichophyton equinum CBS 127.97]
Length = 255
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 183/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAP+ F+VR+VGKTLV RT G K A++ LK RVFEVSL DL +E H++
Sbjct: 22 DPFTRKDEYLVKAPTTFQVRDVGKTLVNRTTGLKNANDYLKGRVFEVSLADLQKDEAHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA + VKTTD++ +RLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLVRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM EIM QA+SC L L K + EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAQSSQIRAIRKKMTEIMQRQASSCTLTQLT-KLVPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + ++
Sbjct: 201 QGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEKVLDS 254
>gi|150984411|gb|ABR87461.1| small subunit ribosomal protein 1 [Pristionchus sp. 10 RS5133]
Length = 252
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 179/235 (76%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----EDVGVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLMDVHGDSGVAAVNAEGERVNLPDDYEPP 247
>gi|296470536|tpg|DAA12651.1| TPA: ribosomal protein S3a-like [Bos taurus]
Length = 264
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/242 (59%), Positives = 184/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKT VTRTQGTKI S+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTSVTRTQGTKITSDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYP +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPFHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|82219689|sp|Q98TX2.3|RS3A_OPHHA RecName: Full=40S ribosomal protein S3a
gi|12958634|gb|AAK09383.1|AF321768_1 ribosomal protein S3a [Ophiophagus hannah]
Length = 264
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 185/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN L NF GM T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|58263140|ref|XP_568980.1| 40s ribosomal protein s3ae-a (s1-a) [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107802|ref|XP_777512.1| 40S ribosomal protein S1 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|338819351|sp|P0CQ59.1|RS3A_CRYNB RecName: Full=40S ribosomal protein S1
gi|338819352|sp|P0CQ58.1|RS3A_CRYNJ RecName: Full=40S ribosomal protein S1
gi|50260204|gb|EAL22865.1| hypothetical protein CNBB0860 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223630|gb|AAW41673.1| 40s ribosomal protein s3ae-a (s1-a), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 259
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/233 (60%), Positives = 178/233 (76%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F RN GKTLV RTQG K A++ LK RV E+SL DL N++E ++
Sbjct: 22 DPFTRKEWYDIKAPSFFENRNAGKTLVNRTQGLKNANDSLKGRVLELSLADLNNDQEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDV GK+ LT+F+GM FTTDKLRS+VRKW +L+EA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVEDVAGKSCLTSFYGMDFTTDKLRSIVRKWQSLVEAHVDVKTTDGYVLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+SQ+++IR KM EIM +A DLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRQSNQVKKTTYAQSSQLKEIRAKMVEIMRREAEGSDLKELVQKFVPESIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPIPE 233
IYPL NV++RK KI+K PK D+ KL+E HG+ + + G KV + + PE
Sbjct: 202 KGIYPLHNVYVRKAKIVKTPKIDMSKLLESHGEAMDANTGSKVVKSGEFVEPE 254
>gi|392883622|gb|AFM90643.1| ribosomal protein S3a [Callorhinchus milii]
Length = 265
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/232 (61%), Positives = 180/232 (77%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIASEGLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASEGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLIVEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ IR+KM EIM+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCTIRKKMMEIMMREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDR 225
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ E+ G KVDR
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSITSKPSGEETGAKVDR 253
>gi|348575357|ref|XP_003473456.1| PREDICTED: 40S ribosomal protein S3a-like [Cavia porcellus]
Length = 264
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/241 (60%), Positives = 185/241 (76%), Gaps = 10/241 (4%)
Query: 3 PFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYR 62
PF+KKDWYD+KA + F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+R
Sbjct: 24 PFSKKDWYDVKALAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFR 82
Query: 63 KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGF 122
K +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GF
Sbjct: 83 KFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGF 142
Query: 123 TKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
TK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 143 TKKRNNQIQKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQ 202
Query: 183 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIPE 233
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+ E
Sbjct: 203 SIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQE 262
Query: 234 A 234
+
Sbjct: 263 S 263
>gi|392877046|gb|AFM87355.1| 40S ribosomal protein S3a [Callorhinchus milii]
gi|392877960|gb|AFM87812.1| 40S ribosomal protein S3a [Callorhinchus milii]
gi|392878482|gb|AFM88073.1| 40S ribosomal protein S3a [Callorhinchus milii]
gi|392879006|gb|AFM88335.1| 40S ribosomal protein S3a [Callorhinchus milii]
gi|392880470|gb|AFM89067.1| 40S ribosomal protein S3a [Callorhinchus milii]
gi|392882448|gb|AFM90056.1| 40S ribosomal protein S3a [Callorhinchus milii]
gi|392883952|gb|AFM90808.1| 40S ribosomal protein S3a [Callorhinchus milii]
gi|392884046|gb|AFM90855.1| 40S ribosomal protein S3a [Callorhinchus milii]
Length = 265
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/232 (61%), Positives = 180/232 (77%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIASEGLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASEGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLIVEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ IR+KM EIM+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCTIRKKMMEIMMREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDR 225
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ E+ G KVDR
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSITSKPSGEETGAKVDR 253
>gi|40642988|emb|CAD91420.1| ribosomal protein S3a [Crassostrea gigas]
Length = 263
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 179/230 (77%), Gaps = 6/230 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F VR +GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E ++
Sbjct: 24 DPFTKKDWYDVKAPSMFVVRQIGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-SF 82
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AE+VQG+NVLTNF GM T DKL S+V+KW T+I+A+VDVKTTD + LR+FCIG
Sbjct: 83 RKFKLMAEEVQGRNVLTNFHGMDLTRDKLCSMVKKWQTMIQAHVDVKTTDGYLLRMFCIG 142
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ QVK+TCYAQT+QI+ IRRKM +I+ + S D+K +V K I + IG++IEKA
Sbjct: 143 FTKKKQFQVKKTCYAQTTQIKTIRRKMVDIITKEVTSNDMKEVVNKLIPDSIGKDIEKAC 202
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-----DVGVKVDRP 226
IYPL +VFIRKVK+LK PKFD+GKLME+HG+ D G V RP
Sbjct: 203 QGIYPLHDVFIRKVKVLKKPKFDIGKLMEMHGEGGSKTVITDSGETVARP 252
>gi|160550141|gb|ABX44775.1| putative 40S ribosomal protein RPS3A [Flustra foliacea]
Length = 263
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/237 (59%), Positives = 182/237 (76%), Gaps = 6/237 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KKDWYD+KAPS F +R +GKTLV+RT GTKIA++GLK RV+EVSL DL N+E A
Sbjct: 23 VDPFTKKDWYDVKAPSMFNIRQIGKTLVSRTVGTKIAADGLKGRVYEVSLADLQNDE-IA 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRK +L +DVQGKN LTNF+GM+ TTDKLRS+V+KW TLIEA D+KTTD + LRLFCI
Sbjct: 82 YRKFKLICDDVQGKNCLTNFYGMTMTTDKLRSMVKKWQTLIEANCDIKTTDGYLLRLFCI 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTKR PNQVK+T YAQT QI++IR++M +I+ + +S D+K +V K I + I ++IEK+
Sbjct: 142 GFTKRRPNQVKKTSYAQTQQIKRIRKRMIQIITREVSSVDMKEVVSKLIPDSIAKDIEKS 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-----YSEDVGVKVDRPADEPIP 232
IYPLQ V IRKVK+L+ PK D+GKLME+HG+ + + G K+DRP + P
Sbjct: 202 CQGIYPLQEVHIRKVKVLRRPKVDVGKLMELHGESGTKTVTTESGEKIDRPDNYEPP 258
>gi|150984393|gb|ABR87452.1| small subunit ribosomal protein 1 [Pristionchus entomophagus]
gi|150984395|gb|ABR87453.1| small subunit ribosomal protein 1 [Pristionchus uniformis]
gi|150984399|gb|ABR87455.1| small subunit ribosomal protein 1 [Pristionchus sp. 4 RS5050]
gi|150984409|gb|ABR87460.1| small subunit ribosomal protein 1 [Pristionchus pseudaerivorus]
gi|150984415|gb|ABR87463.1| small subunit ribosomal protein 1 [Pristionchus americanus]
gi|150984417|gb|ABR87464.1| small subunit ribosomal protein 1 [Pristionchus sp. 13 RS5231]
Length = 252
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 179/235 (76%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLMDVHGDSGVATVGADGERVNLPDDYEPP 247
>gi|308324365|gb|ADO29317.1| 40S ribosomal protein s3a [Ictalurus punctatus]
Length = 266
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/244 (58%), Positives = 185/244 (75%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRSNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE---------DVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ + G KV+R + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSSSSAKPAEGETGAKVERADGYEPP 261
Query: 231 IPEA 234
+ E+
Sbjct: 262 VQES 265
>gi|150984403|gb|ABR87457.1| small subunit ribosomal protein 1 [Pristionchus sp. 6 RS5101]
Length = 252
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 172/213 (80%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANCAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLMDVHGD 225
>gi|154276928|ref|XP_001539309.1| 40S ribosomal protein S1 [Ajellomyces capsulatus NAm1]
gi|269969554|sp|A6R9C3.1|RS3A_AJECN RecName: Full=40S ribosomal protein S1
gi|150414382|gb|EDN09747.1| 40S ribosomal protein S3A [Ajellomyces capsulatus NAm1]
Length = 255
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/234 (62%), Positives = 184/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A+S L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASSRTLAQLT-KLIPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 HGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
>gi|315049199|ref|XP_003173974.1| 40S ribosomal protein S1 [Arthroderma gypseum CBS 118893]
gi|311341941|gb|EFR01144.1| 40S ribosomal protein S3aE [Arthroderma gypseum CBS 118893]
Length = 255
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/234 (62%), Positives = 183/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD Y +KAP+ F+VR+VGKTLV RT G K A++ LK RVFEVSL DL +E H++
Sbjct: 22 DPFTRKDEYLVKAPTTFQVRDVGKTLVNRTTGLKNANDYLKGRVFEVSLADLQKDEAHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLVRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ QA+SC L L K + EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAQSSQIRAIRKKMTEIIQRQASSCTLTQLT-KLVPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + ++
Sbjct: 201 QGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEKVLDS 254
>gi|150984387|gb|ABR87449.1| small subunit ribosomal protein 1 [Pristionchus pacificus]
gi|150984405|gb|ABR87458.1| small subunit ribosomal protein 1 [Pristionchus marianneae]
gi|150984413|gb|ABR87462.1| small subunit ribosomal protein 1 [Pristionchus sp. 11 RS5228]
gi|390135455|gb|AFL56708.1| small subunit ribosomal protein 1, partial [Pristionchus
exspectatus]
gi|390135503|gb|AFL56732.1| small subunit ribosomal protein 1, partial [Pristionchus arcanus]
Length = 252
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 179/235 (76%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANCAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLMDVHGDSGVATVGADGERVNLPDDYEPP 247
>gi|346322976|gb|EGX92574.1| GTP cyclohydrolase II, putative [Cordyceps militaris CM01]
Length = 845
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/225 (63%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+H++
Sbjct: 611 DPFSRKDWYSIKAPNPFNIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSF 670
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLR ++VQGK+ LTNF G+ FT+DKLRSLVRKW +LIEA + VKTTD++ +RLF IG
Sbjct: 671 RKIRLRIDEVQGKSCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLIRLFAIG 730
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YA +SQIR IRRKM +I+ +A++C L L K I EVIGREIEKAT
Sbjct: 731 FTKRRQNQIKKTTYAASSQIRAIRRKMTDIIQREASTCTLTQLTSKLIPEVIGREIEKAT 790
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDR 225
IYPLQNV IRKVK+LKAPKFDLG LM +HG+ ++D G KV+R
Sbjct: 791 QGIYPLQNVHIRKVKLLKAPKFDLGALMALHGESGTDDQGQKVER 835
>gi|48476447|gb|AAT44427.1| V-Fos transformation effector-like protein [Sparus aurata]
Length = 248
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 174/213 (81%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
SIYPL +V++RKVK+LK PKF+LGKLME+HG+
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGE 234
>gi|150984407|gb|ABR87459.1| small subunit ribosomal protein 1 [Pristionchus pauli]
Length = 252
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 179/235 (76%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANCAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIVKKPRFELGRLMDVHGDSGVATVGADGERVNLPDDYEPP 247
>gi|157278417|ref|NP_001098311.1| 40S ribosomal protein S3a [Oryzias latipes]
gi|3914915|sp|O73813.3|RS3A_ORYLA RecName: Full=40S ribosomal protein S3a; AltName: Full=v-fos
transformation effector protein
gi|3037139|gb|AAD10201.1| V-Fos transformation effector [Oryzias latipes]
Length = 266
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/244 (59%), Positives = 183/244 (75%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQV++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH---------GDYSEDVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+H +D G KV+R + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERADGYEPP 261
Query: 231 IPEA 234
I E
Sbjct: 262 IQET 265
>gi|261190410|ref|XP_002621614.1| 40S ribosomal protein S1 [Ajellomyces dermatitidis SLH14081]
gi|269969555|sp|C5GS07.1|RS3A_AJEDR RecName: Full=40S ribosomal protein S1
gi|269969556|sp|C5JZ38.1|RS3A_AJEDS RecName: Full=40S ribosomal protein S1
gi|239591037|gb|EEQ73618.1| 40S ribosomal protein S3A [Ajellomyces dermatitidis SLH14081]
gi|239614953|gb|EEQ91940.1| 40S ribosomal protein S3A [Ajellomyces dermatitidis ER-3]
gi|327356570|gb|EGE85427.1| 40S ribosomal protein S1 [Ajellomyces dermatitidis ATCC 18188]
Length = 255
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 184/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 HGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
>gi|68468883|ref|XP_721500.1| cytosolic ribosomal protein S1 (rp10) [Candida albicans SC5314]
gi|68469429|ref|XP_721229.1| cytosolic ribosomal protein S1 (rp10) [Candida albicans SC5314]
gi|241948477|ref|XP_002416961.1| 40S ribosomal protein S1 [Candida dubliniensis CD36]
gi|269849662|sp|P40910.3|RS3A_CANAL RecName: Full=40S ribosomal protein S1; AltName: Full=S3aE
gi|269969569|sp|P0CC07.1|RS3A_CANAW RecName: Full=40S ribosomal protein S1
gi|269969570|sp|B9W790.1|RS3A_CANDC RecName: Full=40S ribosomal protein S1
gi|46443138|gb|EAL02422.1| cytosolic ribosomal protein S1 (rp10) [Candida albicans SC5314]
gi|46443420|gb|EAL02702.1| cytosolic ribosomal protein S1 (rp10) [Candida albicans SC5314]
gi|223640299|emb|CAX44549.1| 40S ribosomal protein (S1/RP10), putative [Candida dubliniensis
CD36]
gi|238879214|gb|EEQ42852.1| 40S ribosomal protein S1-B [Candida albicans WO-1]
Length = 256
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/234 (59%), Positives = 182/234 (77%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV + + E+
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSSGFKDVVLES 255
>gi|405118730|gb|AFR93504.1| 40s ribosomal protein s3ae-a [Cryptococcus neoformans var. grubii
H99]
Length = 259
Score = 296 bits (757), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 179/233 (76%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAPS F RN GKTLV RTQG K A++ LK RV E+SL DL N++E ++
Sbjct: 22 DPFSRKEWYDIKAPSFFENRNAGKTLVNRTQGLKNANDSLKGRVLELSLADLNNDQEQSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR E+V GK+ LT+F+GM FTTDKLRS+VRKW +L+EA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRVEEVAGKSCLTSFYGMDFTTDKLRSIVRKWQSLVEAHVDVKTTDGYVLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+SQ+++IR KM EIM +A DLK LV+KF+ E IGREIEKA
Sbjct: 142 FTKRQSNQVKKTTYAQSSQLKEIRAKMVEIMRREAEGSDLKELVQKFVPESIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPIPE 233
IYPL NV++RK KI+K PK D+ KL+E HG+ + + G KV + + PE
Sbjct: 202 KGIYPLHNVYVRKAKIVKTPKIDMSKLLESHGEAMDTNTGSKVVKTGEFVEPE 254
>gi|392880156|gb|AFM88910.1| 40S ribosomal protein S3a [Callorhinchus milii]
Length = 265
Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 142/232 (61%), Positives = 179/232 (77%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIASEGLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASEGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+ +KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLIVEDVQGKNCLTNFHGMDLTRDKMCSMAKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ IR+KM EIM+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCTIRKKMMEIMMREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDR 225
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ E+ G KVDR
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSITSKPSGEETGAKVDR 253
>gi|269969553|sp|C0P0F6.1|RS3A_AJECG RecName: Full=40S ribosomal protein S1
gi|225554676|gb|EEH02972.1| 40S ribosomal protein S3AE [Ajellomyces capsulatus G186AR]
gi|325094963|gb|EGC48273.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 255
Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 184/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 HGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
>gi|74006674|ref|XP_850082.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Canis lupus
familiaris]
gi|345807031|ref|XP_003435542.1| PREDICTED: 40S ribosomal protein S3a-like [Canis lupus familiaris]
Length = 264
Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 142/231 (61%), Positives = 180/231 (77%), Gaps = 8/231 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF + T DK+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHDVDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKAMGDETGAKVER 252
>gi|354544268|emb|CCE40991.1| hypothetical protein CPAR2_110290 [Candida parapsilosis]
Length = 256
Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 177/223 (79%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DK+RSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKIRSLVRKWQSLVEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+S++R+IR+KM EIM + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQIKKTTYAQSSKLREIRKKMTEIMQREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
>gi|212549625|ref|NP_001131091.1| 40S ribosomal protein S3a [Sus scrofa]
gi|209943918|gb|ACI96266.1| ribosomal protein S3A [Sus scrofa]
Length = 264
Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/242 (59%), Positives = 185/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+K+DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVS DL N+E A+
Sbjct: 23 DPFSKRDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSPADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKSKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTVIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
IYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QPIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|164655303|ref|XP_001728782.1| hypothetical protein MGL_4117 [Malassezia globosa CBS 7966]
gi|269969586|sp|A8QD49.1|RS3A_MALGO RecName: Full=40S ribosomal protein S1
gi|159102666|gb|EDP41568.1| hypothetical protein MGL_4117 [Malassezia globosa CBS 7966]
Length = 260
Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 182/238 (76%), Gaps = 5/238 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAP F RNVGKT+V R+QG K AS+ LK R+ E SL DL ++E AY
Sbjct: 21 DPFTRKEWYDIKAPVFFENRNVGKTIVNRSQGLKNASDALKGRILEQSLADLNKDDEQAY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +LR ++VQG+N LTNF+GMSFT+DKLRSLVRKW +LIEA+ D++TTD + LR+F IG
Sbjct: 81 RKFQLRVDEVQGRNCLTNFYGMSFTSDKLRSLVRKWQSLIEAHQDIRTTDGYLLRVFAIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQVK+T YA++SQI IR+KM E++ +++SCDL+ V K I EV+GREIEK+T
Sbjct: 141 FTRRRANQVKKTTYAKSSQIHAIRKKMFEVIQRESSSCDLREFVAKLIPEVMGREIEKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----EDVGVKVDRPA-DEPIPEA 234
IYPL++VFI KVK+LK PKFD+ KL E+HG S EDVG K+ EP+P+A
Sbjct: 201 QGIYPLKDVFIHKVKVLKRPKFDVNKLYELHGGASVVGAEDVGTKIKSGEFKEPVPQA 258
>gi|392873588|gb|AFM85626.1| 40S ribosomal protein S3a [Callorhinchus milii]
Length = 265
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/232 (61%), Positives = 180/232 (77%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASKGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLIVEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ IR+KM EIM+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCTIRKKMMEIMMREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDR 225
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ E+ G KVDR
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSITSKPSGEETGAKVDR 253
>gi|150984419|gb|ABR87465.1| small subunit ribosomal protein 1 [Pristionchus sp. 14 RS5230]
Length = 252
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 172/213 (80%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
S IYPLQ+V+IRKVKI+K P+F+LG+L++VHGD
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLLDVHGD 225
>gi|348524428|ref|XP_003449725.1| PREDICTED: 40S ribosomal protein S3a-like [Oreochromis niloticus]
Length = 266
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 183/244 (75%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 142 FTKKRANQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH---------GDYSEDVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+H +D G KV+R + P
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAAGAAKASGDDTGAKVERADGYEPP 261
Query: 231 IPEA 234
I E
Sbjct: 262 IQET 265
>gi|405965439|gb|EKC30815.1| 40S ribosomal protein S3a [Crassostrea gigas]
Length = 306
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/238 (62%), Positives = 179/238 (75%), Gaps = 8/238 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F VR +GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E ++
Sbjct: 65 DPFTKKDWYDVKAPSMFVVRQIGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-SF 123
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AE+VQG+NVLTNF GM T DKL S+V+KW T+I+A+VDVKTTD + LRLFCIG
Sbjct: 124 RKFKLMAEEVQGRNVLTNFHGMDLTRDKLCSMVKKWQTMIQAHVDVKTTDGYLLRLFCIG 183
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ Q+K+TCYAQ +QI+ IRRKM +I+ + S D+K +V K I + IG+EIEKA
Sbjct: 184 FTKKRVYQLKKTCYAQNTQIKTIRRKMVDIITKEVTSNDMKEVVNKLIPDSIGKEIEKAC 243
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSE------DVGVKVDRPADEPIP 232
IYPL NVFI KVK+LK PKFD KLME+HG+ YSE D G V RP P
Sbjct: 244 EGIYPLHNVFICKVKVLKKPKFDFRKLMEIHGEGYSETKNTVTDFGEAVARPMGYEPP 301
>gi|345788970|ref|XP_003433155.1| PREDICTED: 40S ribosomal protein S3a-like [Canis lupus familiaris]
Length = 274
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 184/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 33 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 91
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF G+ T DK S V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 92 RKFKLITEDVQGKNCLTNFHGVDLTRDKRCSTVKKWQTMIEAHVDVKTTDGYLLRLFCVG 151
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 152 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTLEVQTNDLKEVVNKLIPDSIGKDIEKAC 211
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ KV+R + P+
Sbjct: 212 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETSAKVERADGCEPPVQ 271
Query: 233 EA 234
E+
Sbjct: 272 ES 273
>gi|448520300|ref|XP_003868273.1| Rps1 ribosomal protein 10 of the 40S subunit [Candida orthopsilosis
Co 90-125]
gi|380352612|emb|CCG22839.1| Rps1 ribosomal protein 10 of the 40S subunit [Candida
orthopsilosis]
Length = 256
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 177/223 (79%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DK+RSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKIRSLVRKWQSLVEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+S++R+IR+KM EIM + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQIKKTTYAQSSKLREIRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
>gi|156254842|gb|ABU62834.1| RP10 protein [Expression vector pPZ3TA]
Length = 256
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/234 (59%), Positives = 181/234 (77%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFTRKDWLDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV + + E+
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSSGFKDVVLES 255
>gi|391862941|gb|EIT72263.1| 40S ribosomal protein S3A [Aspergillus oryzae 3.042]
Length = 250
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 179/234 (76%), Gaps = 7/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +K S VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKHKS------VGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 75
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 76 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 135
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT
Sbjct: 136 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCTLSQLTTKLIPEVIGREIEKAT 195
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+
Sbjct: 196 QGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 249
>gi|340374631|ref|XP_003385841.1| PREDICTED: 40S ribosomal protein S3a-like [Amphimedon
queenslandica]
Length = 258
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/237 (59%), Positives = 182/237 (76%), Gaps = 5/237 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+ KK+WYD+KAP+ F RN+GKTLVTRTQG K+AS+GLK RVFEVSL DL N+E A+
Sbjct: 22 DPYTKKEWYDVKAPTLFTNRNIGKTLVTRTQGKKLASDGLKGRVFEVSLADLQNDEV-AF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AED+ GKNVLTNF GM+ TTDKL+SLV+KW TLIEA VD KTTD + LR+FCIG
Sbjct: 81 RKFRLIAEDISGKNVLTNFHGMTLTTDKLKSLVKKWQTLIEAIVDAKTTDGYLLRVFCIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ PNQ+K+T YA+ SQ R+IR++M E+M A+ + DLK +V K I + IGR+IEK
Sbjct: 141 FTRKQPNQIKKTAYAKASQCREIRKRMVEMMKAEISGVDLKEVVTKLIPDSIGRDIEKKC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDVGVKVDRPADEPIPEA 234
+I+PL +V IRKVK+LK PKFD+GKL ++HG+ + G KV+R + P+ E
Sbjct: 201 QAIFPLHDVLIRKVKVLKKPKFDIGKLRDLHGEGGTVVTTSSGTKVERSYEPPVQET 257
>gi|19114028|ref|NP_593116.1| 40S ribosomal protein S1 [Schizosaccharomyces pombe 972h-]
gi|20139985|sp|O94438.3|RS3A2_SCHPO RecName: Full=40S ribosomal protein S1-B; AltName: Full=S3aE-B
gi|4927952|gb|AAD33346.1|AF127914_1 ribosomal protein S1B [Schizosaccharomyces pombe]
gi|4049529|emb|CAA22556.1| 40S ribosomal protein S3a (predicted) [Schizosaccharomyces pombe]
Length = 252
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/222 (63%), Positives = 178/222 (80%), Gaps = 1/222 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEHA+
Sbjct: 22 DPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ED+QGK+ LT+F G+S T+DKLRSLVRKW T IEA +KTTD + R+F IG
Sbjct: 82 RKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQVK+T YAQ+SQIR IR+KM +++ Q +SC ++ LV+K I EVIGREIE+AT
Sbjct: 142 FTRRRANQVKKTTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
SI+PLQNV +RKVKILKAPK D KL+E+HG+ S+DVG KV
Sbjct: 202 GSIFPLQNVLVRKVKILKAPKHDAQKLLELHGE-SQDVGTKV 242
>gi|392882862|gb|AFM90263.1| 40S ribosomal protein S3a [Callorhinchus milii]
Length = 265
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/232 (61%), Positives = 179/232 (77%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWY +KAP+ F +RN+GKTLVTRTQGTKIASEGLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYGVKAPAMFNIRNLGKTLVTRTQGTKIASEGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLIVEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ IR+KM EIM+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCTIRKKMMEIMMREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDR 225
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ E+ G KVDR
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSITSKPSGEETGAKVDR 253
>gi|74901606|sp|Q5G5C4.1|RS3A_PERAM RecName: Full=40S ribosomal protein S3a
gi|57869784|gb|AAW57773.1| Parcxpwex01 [Periplaneta americana]
Length = 263
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 180/240 (75%), Gaps = 7/240 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R +GKTLV RTQGTKIASEGLK+RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFATRQIGKTLVNRTQGTKIASEGLKYRVFEVSLADLQNDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ S DLK +V K + + I ++IEK
Sbjct: 143 IGFTNKDQMSQRKTCYAQHTQVRAIRKKMVEIITRDVTSSDLKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPA--DEPIPEA 234
A IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G +VDRP + P+ E
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGGSDEPGARVDRPEGYEPPVQET 262
>gi|50402817|gb|AAT76631.1| ribosomal protein S3a [Felis catus]
Length = 238
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/238 (60%), Positives = 183/238 (76%), Gaps = 10/238 (4%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +
Sbjct: 1 KKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFK 59
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+
Sbjct: 60 LITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKK 119
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIY
Sbjct: 120 RNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIY 179
Query: 186 PLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
PL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+ E+
Sbjct: 180 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQES 237
>gi|150984421|gb|ABR87466.1| small subunit ribosomal protein 1 [Pristionchus sp. 15 RS5229]
Length = 252
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/235 (62%), Positives = 178/235 (75%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEATTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E M + +S DLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHMQKEVSSSDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SVIYPLQDVYIRKVKIVKKPRFELGRLMDVHGDTGVATVGADGERVNLPDDYEPP 247
>gi|15294017|gb|AAK95185.1| 40S ribosomal protein S3a [Ictalurus punctatus]
Length = 264
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 184/244 (75%), Gaps = 12/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E +
Sbjct: 21 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-PF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 80 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA
Sbjct: 140 FTKKRSNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKAC 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE---------DVGVKVDRP--ADEP 230
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ + G KV+R + P
Sbjct: 200 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSSSSAKPAEGETGAKVERADGYEPP 259
Query: 231 IPEA 234
+ E+
Sbjct: 260 VQES 263
>gi|291388252|ref|XP_002710727.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
Length = 264
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 184/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF M T DK+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 82 RKFKLLTEDVQGKNCLTNFHSMDLTCDKMCSMVKKWQTVIEAHVDVKTTDGYLLCLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++ YAQ Q+RQIR+K+ EI+ + + DLK +V K I + IG+EIEKA
Sbjct: 142 FTKKCNNQIRKISYAQHQQVRQIRKKVMEIVTQEVQTNDLKEVVNKLIPDSIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEAPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|150984401|gb|ABR87456.1| small subunit ribosomal protein 1 [Pristionchus aerivorus]
Length = 252
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/235 (62%), Positives = 178/235 (75%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WY IKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYGIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLMDVHGDSGVATVGADGERVNLPDDYEPP 247
>gi|414865390|tpg|DAA43947.1| TPA: hypothetical protein ZEAMMB73_528269, partial [Zea mays]
Length = 188
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/167 (81%), Positives = 151/167 (90%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IAS+GLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASDGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKF 168
FTKR PNQVKRTCYAQ SQIRQI RKM EIM+ QA++CDLK LV KF
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQIHRKMDEIMINQASTCDLKELVSKF 188
>gi|156386292|ref|XP_001633847.1| predicted protein [Nematostella vectensis]
gi|269969590|sp|A7S3J7.1|RS3A_NEMVE RecName: Full=40S ribosomal protein S3a
gi|156220922|gb|EDO41784.1| predicted protein [Nematostella vectensis]
Length = 263
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/237 (61%), Positives = 181/237 (76%), Gaps = 9/237 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F +R +GKT+VTRT GTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 22 DPFTKKDWYDVKAPSMFNIRQIGKTVVTRTAGTKIASDGLKGRVFEVSLADLQNDEI-AF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L E+VQG+N LTNF GM+ TTDKLRSLV+KW TLIEA VDVKTTD + LR+FCIG
Sbjct: 81 RKFKLMCEEVQGRNCLTNFHGMNMTTDKLRSLVKKWQTLIEAAVDVKTTDGYLLRMFCIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YA+ +QI+ IR+KM +I+ + ++ DLK +V K I + IG++IEK+
Sbjct: 141 FTKRRQNQIKKTAYAKHTQIKAIRKKMVDIITREVSTNDLKEVVNKLIPDSIGKDIEKSC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV--------GVKVDRPADEP 230
SIYPL +V IRKVK+LK PKFD+GKLME+HG+ S G K+DR EP
Sbjct: 201 QSIYPLHDVHIRKVKVLKKPKFDIGKLMEMHGEASSHATTTTTDETGTKIDREGFEP 257
>gi|269969639|sp|C6HGN3.2|RS3A_AJECH RecName: Full=40S ribosomal protein S1
Length = 255
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/234 (61%), Positives = 184/234 (78%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREI+K+T
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKST 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 HGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
>gi|402887960|ref|XP_003907346.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Papio anubis]
gi|402887962|ref|XP_003907347.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Papio anubis]
Length = 264
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/242 (59%), Positives = 183/242 (75%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA + F VRN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKASAMFNVRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTTIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+K EIM + + DLK +V K I + IG++ EKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKKMEIMTREVQTNDLKEVVNKLIPDSIGKDTEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
S+YPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSVYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADRYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|344289158|ref|XP_003416312.1| PREDICTED: 40S ribosomal protein S3a-like [Loxodonta africana]
Length = 300
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 182/242 (75%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA + F +RN+GKTL+TRTQGTKIAS+GLK RVFEVSL DL N+E +
Sbjct: 59 DPFSKKDWYDVKASAMFNIRNIGKTLITRTQGTKIASDGLKGRVFEVSLADLQNDEV-VF 117
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF+GM T DK+ SLV+KW T+IEA+VDV+TTD + LRLFC G
Sbjct: 118 RKFKLITEDVQGKNCLTNFYGMDLTRDKMCSLVKKWQTMIEAHVDVRTTDGYLLRLFCAG 177
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM IM + + DLK V K I + IG++IEKA
Sbjct: 178 FTKKCNNQIRKTSYAQHQQVRQIRKKMMAIMTREVQTNDLKEAVNKLIPDSIGKDIEKAC 237
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 238 QSIYPLHDVFVRKVKMLKKPKFGLGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 297
Query: 233 EA 234
E+
Sbjct: 298 ES 299
>gi|449019405|dbj|BAM82807.1| 40S ribosomal protein S3A [Cyanidioschyzon merolae strain 10D]
Length = 269
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/226 (60%), Positives = 175/226 (77%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+++K+WYD+KAPS F VR GKT+V++T GT+IASE LK RVFE+SL DL +E+ AY
Sbjct: 22 DPYSRKEWYDVKAPSYFSVRQAGKTIVSKTSGTRIASESLKGRVFEISLADLQKDEDLAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDVQG+N LT F+G FT DKL S++RKW T IEA+VDVKT D++ LRLFCIG
Sbjct: 82 RKIKLRCEDVQGRNCLTQFYGFDFTRDKLSSMMRKWQTTIEAHVDVKTLDDYVLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR Q+++T Y + SQ R IR+KM +IMV + + L+ V I E IG+EIEKA
Sbjct: 142 FTKRRQGQIRKTSYCKKSQERAIRKKMVDIMVQETSKGTLRDFVANIIPEAIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA 227
+IYPLQNV+IRK K+++APKFDL KLMEVHGD ED GV++++ A
Sbjct: 202 KNIYPLQNVYIRKCKLIRAPKFDLTKLMEVHGDAPEDTGVRLEQGA 247
>gi|392880312|gb|AFM88988.1| ribosomal protein S3a [Callorhinchus milii]
Length = 265
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/232 (60%), Positives = 179/232 (77%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIASEGLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASEGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA++DV TTD + LRLFC+G
Sbjct: 82 RKFKLIVEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHIDVNTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ IR+KM EI++ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCTIRKKMMEIVMREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDR 225
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ E+ G KVDR
Sbjct: 202 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSITSKPSGEETGAKVDR 253
>gi|324514604|gb|ADY45925.1| 40S ribosomal protein S3a [Ascaris suum]
Length = 249
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/234 (63%), Positives = 177/234 (75%), Gaps = 4/234 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIASEGLK RVFEVSLGDL N E +
Sbjct: 12 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASEGLKGRVFEVSLGDL-NNSEFDF 70
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQG+N LTNF GM FT DKL S+V+KWHTLIEA V VKT+D + LRLFCIG
Sbjct: 71 RKFRLICEDVQGRNCLTNFHGMKFTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIG 130
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ Q+K+T YA++S+IRQIR KM E M + DL+ + K I + IG++IEKA
Sbjct: 131 FTKKNVGQLKKTSYAKSSKIRQIRAKMIEHMQKEVQGSDLREVCNKLIPDSIGKDIEKAC 190
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPIP 232
+ IYPLQ+V+IRKVKILK PKF++G+LME+HGD Y+ G KVDRP D P
Sbjct: 191 AYIYPLQDVYIRKVKILKKPKFEVGRLMEMHGDISSYTNAEGEKVDRPDDYEPP 244
>gi|320588892|gb|EFX01360.1| 40S ribosomal protein s3ae [Grosmannia clavigera kw1407]
Length = 450
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 168/211 (79%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+ IKAP+ F R+VGKTLV RT G K A++ LK RV EVSL DL N+EEH++
Sbjct: 22 DPFTRKDWFSIKAPTTFAHRDVGKTLVNRTTGLKNANDALKGRVVEVSLADLQNDEEHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF G+ FT+DKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A+SC L+ L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASSCTLQQLTAKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
IYPLQNV IRKVK+LK PKFDLG L+ +H
Sbjct: 202 QGIYPLQNVHIRKVKLLKQPKFDLGALLALH 232
>gi|442749481|gb|JAA66900.1| Putative 40s ribosomal protein s3a [Ixodes ricinus]
Length = 264
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 174/219 (79%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY +KAP F VRN G+TLVT+TQGTK+A +GL++RVFEVSL DL +E+ AY
Sbjct: 22 DPFLKKEWYTLKAPVMFHVRNFGQTLVTKTQGTKLAIDGLRNRVFEVSLADLNADEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L EDVQG+N LTNF G S T DKL SL+RK ++LIEAY DVKTTD + LR+FCIG
Sbjct: 82 RKIKLCCEDVQGRNCLTNFHGSSVTRDKLCSLIRKNYSLIEAYTDVKTTDGYMLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+TKR P Q+K TCYA+TS+ R IRRKM ++M +A++ L+ +V+K I E IG+EIEKA
Sbjct: 142 YTKRRPGQLKSTCYARTSKTRIIRRKMVQVMQREASTTSLREVVKKIIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 220
+++PLQNV IRK+K+LK PKFDL KLMEVH D SED G
Sbjct: 202 KNVFPLQNVLIRKIKVLKKPKFDLTKLMEVHTDLSEDSG 240
>gi|119625399|gb|EAX04994.1| ribosomal protein S3A, isoform CRA_g [Homo sapiens]
Length = 259
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 184/242 (76%), Gaps = 15/242 (6%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKE-----IPDSIGKDIEKAC 196
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 197 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 256
Query: 233 EA 234
E+
Sbjct: 257 ES 258
>gi|410044112|ref|XP_003951751.1| PREDICTED: 40S ribosomal protein S3a-like [Pan troglodytes]
Length = 261
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/238 (59%), Positives = 181/238 (76%), Gaps = 11/238 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+ AP+ F +RN+GKTLVTRTQGTKIAS+G RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASDG---RVFEVSLADLQNDEV-AF 78
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF G+ T+DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 79 RKFKLITEDVQGKNCLTNFHGVDLTSDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 138
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + DLK +V K I + IG++IEKA
Sbjct: 139 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQKNDLKEVVNKLIPDSIGKDIEKAC 198
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ GVKV+R +P
Sbjct: 199 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGCSSGKATGDETGVKVERADGYELP 256
>gi|188523813|gb|ACD61705.1| ribosomal protein S3 [Chironomus riparius]
Length = 270
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/237 (60%), Positives = 176/237 (74%), Gaps = 12/237 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYDIKAPS F R VGKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDIKAPSMFTTRQVGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIE +VDVKTTD + LR+FC
Sbjct: 83 SFRKFKLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIECHVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + + ++TCYAQTSQI+ IR+KM +I+ AS DLK +V K + + I ++IEK
Sbjct: 143 IGFTAKDSSSHRKTCYAQTSQIKTIRKKMTDIINRDIASSDLKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----------GVKVDRP 226
A +YPL +VFIRKVK+LK P+FDL KL+E+HGD + GV V+RP
Sbjct: 203 ACHGVYPLHDVFIRKVKVLKKPRFDLSKLLELHGDGGKSTEPTATTAAVEGVPVERP 259
>gi|408474528|gb|AFU72288.1| 40S ribosomal protein S1, partial [Amanita strobiliformis]
Length = 219
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 172/213 (80%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RNVGKTLV R+ G K A++ LK R+ E+SL DL +EE A+RKI+LR ++VQGKN L
Sbjct: 1 FEIRNVGKTLVNRSTGMKNANDSLKGRIIEISLADLNKDEEQAFRKIKLRIDEVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P+QV++T YAQ
Sbjct: 61 TNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPSQVRKTTYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
+SQ+R+IR+KM EI+ +A SCDLK LV+KF+ E IGREIEKA IYPLQNV+IRK KI
Sbjct: 121 SSQVREIRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKACRGIYPLQNVYIRKAKI 180
Query: 198 LKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
LKAPKFD+ KL+E+HG+ +++ G KV + EP
Sbjct: 181 LKAPKFDVSKLLELHGESTDETGTKVAKDFQEP 213
>gi|150984389|gb|ABR87450.1| small subunit ribosomal protein 1 [Pristionchus maupasi]
Length = 252
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 147/235 (62%), Positives = 177/235 (75%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT D L S+ +KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDNLCSINKKWHTMVEANTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + ASCDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVASCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+LM+VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLMDVHGDSGVATVGADGERVNLPDDYEPP 247
>gi|255730245|ref|XP_002550047.1| 40S ribosomal protein S3aE [Candida tropicalis MYA-3404]
gi|269969571|sp|C5ME52.1|RS3A_CANTT RecName: Full=40S ribosomal protein S1
gi|240132004|gb|EER31562.1| 40S ribosomal protein S3aE [Candida tropicalis MYA-3404]
Length = 256
Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/234 (58%), Positives = 180/234 (76%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV + + E+
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSSGFKDVVLES 255
>gi|213405917|ref|XP_002173730.1| 40S ribosomal protein S1 [Schizosaccharomyces japonicus yFS275]
gi|212001777|gb|EEB07437.1| 40S ribosomal protein S3a [Schizosaccharomyces japonicus yFS275]
Length = 252
Score = 292 bits (748), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 176/222 (79%), Gaps = 1/222 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAPS F V+NVGKTLV RT G K A++ LK RV EVSL DL +EEH++
Sbjct: 22 DPFSRKEWYDIKAPSFFEVKNVGKTLVNRTSGLKNANDALKGRVVEVSLADLQKDEEHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR E++QGK+ LT+F GM T+DKLRSLVRKW T IEA +KTTD + R+F IG
Sbjct: 82 RKVKLRVEEIQGKSCLTSFGGMDMTSDKLRSLVRKWQTTIEANQTIKTTDGYVCRIFVIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R PNQ+K+T YAQ+SQIR IR+KM +++ QA C ++ LV+K I E+IGR IEKAT
Sbjct: 142 FTRRRPNQIKKTTYAQSSQIRAIRQKMFQVIQNQATGCSMRELVQKLIPEMIGRAIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
++IYPLQNV++RKVKILK PK D K++E HG+ ++DVG KV
Sbjct: 202 NNIYPLQNVYVRKVKILKGPKLDAQKILEQHGE-AQDVGTKV 242
>gi|344304529|gb|EGW34761.1| cytosolic ribosomal protein S1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 256
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 177/223 (79%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGALLALHGEGSTEEKGKKV 244
>gi|355749613|gb|EHH54012.1| hypothetical protein EGM_14744 [Macaca fascicularis]
Length = 264
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 184/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+ A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDAV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGK LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKTCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDCYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T +AQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSHAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+L KLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELEKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|213402457|ref|XP_002172001.1| 40S ribosomal protein S1 [Schizosaccharomyces japonicus yFS275]
gi|269969609|sp|B6JWF7.1|RS3A_SCHJY RecName: Full=40S ribosomal protein S1
gi|212000048|gb|EEB05708.1| 40S ribosomal protein S3a [Schizosaccharomyces japonicus yFS275]
Length = 252
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 174/222 (78%), Gaps = 1/222 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAPS F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEH++
Sbjct: 22 DPFSRKDWYDIKAPSFFEVKNVGKTLVNRTAGLKNANDALKGRIVEVSLADLQKDEEHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +DVQGK LT F GMS T+DKLRSLVRKW T IEA +KTTD + R+F IG
Sbjct: 82 RKVKLRVDDVQGKACLTTFNGMSMTSDKLRSLVRKWQTTIEADQTIKTTDGYVCRIFVIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQ+K+T YAQ+SQIR IR+KM +++ QA C ++ LV+K I E+IGREIEKAT
Sbjct: 142 FTRRRYNQIKKTTYAQSSQIRAIRQKMFQVIQNQATGCSMRELVQKLIPEIIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
I+PLQNVF+RKVKILK+PK D KL+E HG+ ++DVG KV
Sbjct: 202 GGIFPLQNVFVRKVKILKSPKLDAQKLLEQHGE-AQDVGTKV 242
>gi|320582675|gb|EFW96892.1| 40S ribosomal protein S3aE [Ogataea parapolymorpha DL-1]
Length = 256
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 175/223 (78%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYDIKAP+ F RNVGKTL+ ++ G K A++GLK RV EV L DL E+H+Y
Sbjct: 22 DPFTKKEWYDIKAPTTFENRNVGKTLINKSTGLKNAADGLKGRVVEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+KI+LR ++VQGKN+LTNF GM FTTDKLRSLVRKW +L+EA V VKT+D++ LR+FCI
Sbjct: 82 KKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSLVRKWQSLVEASVTVKTSDDYVLRVFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ+S++R++R+KM EIM + ++ L L K I E IGREIEK+T
Sbjct: 142 FTKRQANQIKKTTYAQSSKLREVRKKMMEIMTREVSNSTLAQLTGKLIPEAIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
SI+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct: 202 QSIFPLQNVHIRKVKLLKQPKFDLGNLLALHGEGSVEEKGKKV 244
>gi|389032437|gb|AFK82355.1| 40S ribosomal protein S3A, partial [Ctenocephalides felis]
Length = 251
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/242 (58%), Positives = 179/242 (73%), Gaps = 9/242 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R +GKTLV RTQGT+IA++GLKHRVFEVSL DL N+ E
Sbjct: 9 DPFTRKDWYDVKAPSMFATRQIGKTLVNRTQGTRIAADGLKHRVFEVSLADLQNDHDAER 68
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+YRK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW +L+EA +DV+TTD + LR+FC
Sbjct: 69 SYRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQSLVEANIDVRTTDGYLLRVFC 128
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI IR+KM EI+ S DLK +V K + + IG++IEK
Sbjct: 129 IGFTTKDQMSQRKTCYAQHSQICAIRKKMCEIITRDVTSSDLKEVVNKLLPDSIGKDIEK 188
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV-----GVKVDRPA--DEPIP 232
A IYPL +VFIRKVK+LK P+FDL KL+E+HGD + G +VDRP + P+
Sbjct: 189 ACQGIYPLHDVFIRKVKVLKKPRFDLSKLLELHGDGGKGTEGVTEGAQVDRPEGYEPPVQ 248
Query: 233 EA 234
+A
Sbjct: 249 DA 250
>gi|126138510|ref|XP_001385778.1| 40S ribosomal protein S1 [Scheffersomyces stipitis CBS 6054]
gi|269969546|sp|A3LX67.1|RS3A2_PICST RecName: Full=40S ribosomal protein S1-B
gi|126093056|gb|ABN67749.1| ribosomal protein S3Ae [Scheffersomyces stipitis CBS 6054]
Length = 256
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/224 (61%), Positives = 177/224 (79%), Gaps = 1/224 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAPS F RNVGKTL+ R+ G K A++GLK RV EVSL DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPSTFENRNVGKTLINRSTGLKNAADGLKGRVVEVSLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVD 224
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV+
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGALLALHGEGSTEEKGKKVN 245
>gi|324028132|gb|ADY16617.1| ribosomal protein S3a [Fenneropenaeus merguiensis]
Length = 266
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 182/242 (75%), Gaps = 9/242 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+K+P+ F RNVGKTLV RTQGTKIASEGLK RVFEVSL DL NE E
Sbjct: 23 DPFTRKDWYDVKSPALFTNRNVGKTLVNRTQGTKIASEGLKSRVFEVSLADLQNETDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AE+VQGKNVL NF G S TTDK+RS+V+KW TLIE DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEEVQGKNVLCNFHGFSLTTDKMRSMVKKWQTLIEGNTDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FT+++ +Q K+T YAQ Q++ IRRKM +I+ + AS +LK +V K I + + +I K
Sbjct: 143 VAFTEKMASQTKKTAYAQHMQVKNIRRKMVDIITREVASSELKEVVNKLIPDTMADDIRK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD------YSEDVGVKVDRPAD-EPIP 232
A +SIYPL++V IRKVK+LK P+FDLGKL+E+HG+ EDVG +VDRP + EP
Sbjct: 203 ACNSIYPLKDVHIRKVKVLKKPRFDLGKLLEMHGESGKAIASGEDVGSRVDRPDNYEPPV 262
Query: 233 EA 234
+A
Sbjct: 263 QA 264
>gi|397516053|ref|XP_003828253.1| PREDICTED: 40S ribosomal protein S3a-like [Pan paniscus]
Length = 261
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/239 (59%), Positives = 181/239 (75%), Gaps = 11/239 (4%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+ AP+ F +RN+GKTLVTRTQGTKIAS+G RVFEVSL DL N+E A
Sbjct: 22 VDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASDG---RVFEVSLADLQNDEV-A 77
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L EDVQGKN LTNF G+ T+DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 137
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ+ +T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 138 GFTKKRNNQIWKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 197
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ GVKV+R +P
Sbjct: 198 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGCSSGKATGDETGVKVERADGYELP 256
>gi|166952345|gb|ABZ04255.1| ribosomal protein rps3a [Lineus viridis]
Length = 229
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 167/208 (80%), Gaps = 1/208 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KKDWYD+KAPS F +R +GKTLVTRTQGTKIAS+GLK RVFE SL DL N+E A
Sbjct: 23 VDPFTKKDWYDVKAPSMFNIRQIGKTLVTRTQGTKIASDGLKGRVFECSLADLQNDEV-A 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L E+VQGKN+LTNF GM TTDKL+S+V+KW TLIEA+V+VKTTD + L LFCI
Sbjct: 82 FRKFKLMCEEVQGKNLLTNFHGMDLTTDKLKSMVKKWQTLIEAHVEVKTTDGYYLSLFCI 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQVK+TCYAQT+QIR IR+KM +IM + AS DLK +V K I + IG++IEK
Sbjct: 142 GFTKKRQNQVKKTCYAQTTQIRAIRKKMVDIMTREVASNDLKDVVNKLIPDSIGKDIEKT 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKL 208
IYPL +VFIRKVKI+K PKFDLG L
Sbjct: 202 CQGIYPLHDVFIRKVKIVKNPKFDLGNL 229
>gi|294868384|ref|XP_002765511.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
gi|294873435|ref|XP_002766626.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
gi|294899328|ref|XP_002776593.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
gi|294945448|ref|XP_002784685.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
gi|239865554|gb|EEQ98228.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
gi|239867658|gb|EEQ99343.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
gi|239883635|gb|EER08409.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
gi|239897870|gb|EER16481.1| 40S ribosomal protein S3A, putative [Perkinsus marinus ATCC 50983]
Length = 257
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/234 (60%), Positives = 178/234 (76%), Gaps = 4/234 (1%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WY +KAP+ F VR GKTLVT+T GTKIAS+ LK RV EV+L DL + E+H+
Sbjct: 21 GDPFLKKEWYSVKAPTMFSVREAGKTLVTKTTGTKIASDALKGRVCEVNLADLNSNEDHS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+L ++VQG+N LT+F GM FT DKL SL+RKW TLIEA+VDVKTTD + LRLF I
Sbjct: 81 FRKIKLEVQEVQGRNALTDFHGMDFTRDKLCSLIRKWQTLIEAHVDVKTTDGYILRLFSI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ P VK CYA +QIR+IRRKM +IM A+A+ C + LV++F+ E IG EIEK
Sbjct: 141 GFTKKRPESVKANCYASAAQIRRIRRKMVDIMTAEASKCRMSDLVKRFVTESIGAEIEKQ 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA 234
T SIYPL++ +IRKVKILK PKFDL +LME+H + +E+ G VDR IPE+
Sbjct: 201 TRSIYPLKDCYIRKVKILKKPKFDLTRLMELHTESAEE-GTAVDRNV---IPES 250
>gi|255965437|gb|ACU45023.1| ribosomal protein S3a [Pfiesteria piscicida]
Length = 243
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/236 (58%), Positives = 177/236 (75%), Gaps = 9/236 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F+KKDWYDIKAPS F+VRN+GKTLVTR+ G ++A++ LK RV E +L D+ +E+ Y
Sbjct: 5 DAFSKKDWYDIKAPSAFQVRNIGKTLVTRSSGMRVATDFLKGRVVEANLADMNKDEDQNY 64
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRL+ DVQGK+ L NF+GM TTDK+RSLV+KW T IE VDV TTD + LR+FC+
Sbjct: 65 RKIRLQIMDVQGKSCLCNFYGMDMTTDKIRSLVKKWQTTIECAVDVTTTDGYKLRMFCLA 124
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+K+T YAQT+QI+ IR+KM +IM +A++ DLK LV KFI IG +IE+A
Sbjct: 125 FTKKRQNQLKKTTYAQTAQIKMIRKKMTDIMTKEASTVDLKELVRKFIPNSIGTQIEQAC 184
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE---------DVGVKVDRPAD 228
IYPL++VFIRKVK LKAP+FD+ KLMEVHG +E D G KVDRP++
Sbjct: 185 QCIYPLKDVFIRKVKTLKAPRFDITKLMEVHGSSTEVSAVPTSSLDEGTKVDRPSE 240
>gi|150984391|gb|ABR87451.1| small subunit ribosomal protein 1 [Pristionchus lheritieri]
Length = 252
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/235 (62%), Positives = 178/235 (75%), Gaps = 5/235 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIAS+GLK RVFEV LGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVFLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT++EA VKTTD + LRLFCIG
Sbjct: 73 RKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMVEANTAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QVK+TCYAQ+S++RQIR KM E + + A+CDLK + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVKKTCYAQSSKVRQIRAKMVEHIQKEVATCDLKEVCNKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPADEPIP 232
S IYPLQ+V+IRKVKI+K P+F+LG+L++VHGD G +V+ P D P
Sbjct: 193 SFIYPLQDVYIRKVKIIKKPRFELGRLLDVHGDSGVATVGADGERVNLPDDYEPP 247
>gi|74910270|sp|Q6EV04.1|RS3A_BIPLU RecName: Full=40S ribosomal protein S3a
gi|50344458|emb|CAH04315.1| S3Ae ribosomal protein [Biphyllus lunatus]
Length = 267
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 179/244 (73%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAP F R VGKTLV RTQGTKIASEGLKHRVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPCMFATRQVGKTLVNRTQGTKIASEGLKHRVFEVSLADLQNDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW +LIEA DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQSLIEASADVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ + DLK +V K + + I ++IEK
Sbjct: 143 IGFTNKDQLSQRKTCYAQHTQVRSIRKKMVEIITRDISGSDLKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------DVGVKVDRPA--DEP 230
A+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD + + G KVD+P + P
Sbjct: 203 ASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDSGKGGSGEPGEAGSKVDKPEGYEPP 262
Query: 231 IPEA 234
+ EA
Sbjct: 263 VQEA 266
>gi|426357049|ref|XP_004045861.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Gorilla
gorilla gorilla]
gi|426357051|ref|XP_004045862.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Gorilla
gorilla gorilla]
Length = 264
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA + F +RN+GKTLVTRTQGTKIAS+GLK VFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKATAMFSIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKN L NF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFRLITEDVQGKNCLANFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQI++KM +IM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIQKKMIKIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGS 236
>gi|297674652|ref|XP_002815330.1| PREDICTED: 40S ribosomal protein S3a-like [Pongo abelii]
Length = 264
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 182/242 (75%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA + F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N E A+
Sbjct: 23 DPFSKKDWYDVKALAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNGEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQ KN LTNF+GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQDKNCLTNFYGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ QIR+KM EIM + + DLK +V K I + G++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCQIRKKMMEIMTREVQTNDLKEVVNKLIPDSTGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------DVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGYETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|392879116|gb|AFM88390.1| ribosomal protein S3a [Callorhinchus milii]
Length = 265
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 178/232 (76%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IASEGLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASEGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA++DVKTTD + LRLFC+G
Sbjct: 82 RKFKLIVEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ IR+KM EIM+ + + D K +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCTIRKKMMEIMMREVQTNDFKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKVDR 225
SIYP +V++ KVK+LK PKF+LGKLME+HG+ + E+ G KVDR
Sbjct: 202 QSIYPFHDVYVWKVKMLKKPKFELGKLMELHGEGGSITSKPFGEETGAKVDR 253
>gi|395827612|ref|XP_003786993.1| PREDICTED: 40S ribosomal protein S3a-like [Otolemur garnettii]
Length = 264
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/242 (58%), Positives = 184/242 (76%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T +K+ S+V+KW T+IEA+VDVKTTD++ L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTHNKMCSMVKKWQTMIEAHVDVKTTDDYLLCLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQI +KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIQKTSYAQHQQVRQIWKKMMEIMSREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+H + ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHSEGRSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|328766903|gb|EGF76955.1| hypothetical protein BATDEDRAFT_33774 [Batrachochytrium
dendrobatidis JAM81]
Length = 259
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 172/222 (77%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAP F VRNVGKTLV RTQG K A + LK+RV EVSL DL N +E ++
Sbjct: 22 DPFSRKDWYDIKAPVTFDVRNVGKTLVNRTQGLKNAKDYLKNRVLEVSLADLSNNQEDSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++L+ ++V G N LTNF G+ T+DKLRSLV+KW +LIEAYVDVKTTD + +R+F I
Sbjct: 82 RKVKLQIQEVSGTNCLTNFHGIDITSDKLRSLVKKWQSLIEAYVDVKTTDGYLIRIFTIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQ+++T YA ++QIR IR+KM EI+ +A SCDLK V K EVIG+ IEK
Sbjct: 142 FTQRRKNQLRKTTYATSAQIRAIRKKMFEIVTKEATSCDLKEFVRKLAPEVIGKAIEKQC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
+IYPLQN +RKVKILKAP+FDLGKL+E+HG+ +D G KV
Sbjct: 202 QNIYPLQNTMVRKVKILKAPRFDLGKLLELHGERGDDKGFKV 243
>gi|296202973|ref|XP_002748689.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Callithrix
jacchus]
Length = 264
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/237 (59%), Positives = 182/237 (76%), Gaps = 9/237 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LT+F G+ T DK+ S V+KW T+IEA+VDVKTT + L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTDFHGVDLTCDKMCSTVKKWQTMIEAHVDVKTTVGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K + + IG++IE+A
Sbjct: 142 FTKKRNNQIQKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVSKLLPDSIGKDIEQAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP-ADEP 230
S+YPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R A EP
Sbjct: 202 QSVYPLHHVFVRKVKMLKKPKFELGKLMELHGEGSSSRKATGDETGAKVERADAYEP 258
>gi|307095112|gb|ADN29862.1| 40S ribosomal protein S3a [Triatoma matogrossensis]
Length = 262
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 178/234 (76%), Gaps = 5/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F R +GKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTTRQIGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+YRK RL AEDVQ +NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FC
Sbjct: 83 SYRKFRLIAEDVQARNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVRTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+RQIRRKM + + + ++ DL+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDQLSQRKTCYAQHTQVRQIRRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--YSEDVGVKVDRP-ADEP 230
A IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G KV RP A EP
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGSDEPGAKVSRPEAYEP 256
>gi|344234302|gb|EGV66172.1| ribosomal protein S3Ae [Candida tenuis ATCC 10573]
gi|344234303|gb|EGV66173.1| hypothetical protein CANTEDRAFT_112638 [Candida tenuis ATCC 10573]
Length = 255
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 171/217 (78%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAPS F RNVGKTL+ ++ G K A++GLK RV EVSL DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVVEVSLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R I+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RNIKLRVDEVQGKNLLTNFHGLNFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ+S++R+IR+KM EIM + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQQNQIKKTTYAQSSKLREIRKKMMEIMQREVSNVTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 218
+IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +
Sbjct: 202 QTIYPLQNVHIRKVKLLKQPKFDLGALLSLHGEGSAE 238
>gi|269969616|sp|A6YPJ8.1|RS3A_TRIIF RecName: Full=40S ribosomal protein S3a
gi|149689108|gb|ABR27894.1| 40S ribosomal protein S3a [Triatoma infestans]
Length = 262
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 178/234 (76%), Gaps = 5/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F R +GKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTTRQIGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+YRK RL AEDVQ +NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FC
Sbjct: 83 SYRKFRLIAEDVQARNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVRTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+RQIRRKM + + + ++ DL+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDQLSQRKTCYAQHTQVRQIRRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--YSEDVGVKVDRP-ADEP 230
A IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G KV RP A EP
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGSDEPGAKVSRPEAYEP 256
>gi|19113740|ref|NP_592828.1| 40S ribosomal protein S1 [Schizosaccharomyces pombe 972h-]
gi|1173245|sp|Q09781.2|RS3A1_SCHPO RecName: Full=40S ribosomal protein S1-A; AltName: Full=S3aE-A
gi|1008987|emb|CAA91095.1| 40S ribosomal protein S3a [Schizosaccharomyces pombe]
Length = 252
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 174/222 (78%), Gaps = 1/222 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEH++
Sbjct: 22 DPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ED+QGK+ LT+F G T+DKLRSLVRKW + IEA +KTTD + R+F IG
Sbjct: 82 RKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQVK+T YAQ+SQIR I +KM +++ QA C +K LV+K I EVIGR IEKAT
Sbjct: 142 FTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
++IYPLQNVF+RKVKILKAPK D KL+E+HG+ S+DVG KV
Sbjct: 202 NNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 242
>gi|146413567|ref|XP_001482754.1| 40S ribosomal protein S3aE [Meyerozyma guilliermondii ATCC 6260]
gi|269969601|sp|A5DN58.1|RS3A_PICGU RecName: Full=40S ribosomal protein S1
gi|146392453|gb|EDK40611.1| 40S ribosomal protein S3aE [Meyerozyma guilliermondii ATCC 6260]
Length = 256
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 176/223 (78%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAP+ F R VGKTL+ ++ G K A++GLK RV EV+L DL E+HAY
Sbjct: 22 DPFTRKEWFDIKAPTTFENRAVGKTLINKSTGLKNAADGLKGRVIEVNLADLQGSEDHAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKWQSLVEANVTVKTADDYYLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVK+T YAQ+S++R+IR+KM EIM + ++ L L +K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQVKKTTYAQSSKLREIRKKMMEIMQREVSNSTLAQLTQKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKV 223
+I+PLQNV IRKVK+LK PKFDLG LM +HG+ SE+ G KV
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDLGNLMSLHGEGASEEKGKKV 244
>gi|442761017|gb|JAA72667.1| Putative 40s ribosomal protein s3a, partial [Ixodes ricinus]
Length = 249
Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 172/220 (78%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DPF KK+WY + AP F VRN G+TLVT+TQGTK+AS+GLK+RVFEVSL DL +E+ A
Sbjct: 6 SDPFLKKEWYTLNAPVMFHVRNFGQTLVTKTQGTKLASDGLKNRVFEVSLADLNADEDQA 65
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRKI+L EDVQG+N LTNF G S T DKL SL+RK ++LIEAY DVKTTD + LR+FCI
Sbjct: 66 YRKIKLCCEDVQGRNCLTNFHGSSITRDKLCSLIRKNYSLIEAYTDVKTTDGYMLRMFCI 125
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
G+TKR P Q+K TCY +TS+ R IRRKM ++M +A++ L+ +K I E IG+EIEKA
Sbjct: 126 GYTKRRPGQLKSTCYVRTSKTRIIRRKMVQVMQREASTTSLREGGKKIIPESIGKEIEKA 185
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 220
+++PLQNV IRK+K+LK PKFDL KLMEVH D SED G
Sbjct: 186 CKNVFPLQNVLIRKIKVLKKPKFDLTKLMEVHTDLSEDSG 225
>gi|291384091|ref|XP_002708684.1| PREDICTED: ribosomal protein S3a-like [Oryctolagus cuniculus]
Length = 264
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 142/242 (58%), Positives = 182/242 (75%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKD YD+KAP+ F +RN+GKTLV RTQGT IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDSYDVKAPAMFNIRNIGKTLVMRTQGTNIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTN GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNSHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKCNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK KF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKHKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|428178625|gb|EKX47500.1| small subunit ribosomal protein S3Ae, cytoplasmic [Guillardia theta
CCMP2712]
gi|428178626|gb|EKX47501.1| hypothetical protein GUITHDRAFT_162724 [Guillardia theta CCMP2712]
Length = 257
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 136/235 (57%), Positives = 176/235 (74%), Gaps = 8/235 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F++KDWYDIKAP+ F++RNVGKTLVTR+ G ++A+E LK RV E +L DL +E+ Y
Sbjct: 22 DAFSRKDWYDIKAPNAFQIRNVGKTLVTRSSGMRVATEYLKGRVVEANLADLNKDEDQNY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L+ D+ GKN L NF+GM TTDK+RSLV+KW T IE VDV TTD + LR+ CI
Sbjct: 82 RKIKLQMMDISGKNCLCNFYGMDMTTDKIRSLVKKWQTTIECTVDVTTTDGYKLRMSCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQT+QI+QIR+KM +IM +A++ DLK LV KFI IG +IE+A
Sbjct: 142 FTKKRANQLRKTTYAQTAQIKQIRKKMTDIMTKEASTVDLKDLVRKFIPNSIGTQIEQAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE--------DVGVKVDRPAD 228
IYPL++V+IRKVK LKAPKFD+ KLMEVHG+ +E D G KVDRP +
Sbjct: 202 QCIYPLKDVYIRKVKTLKAPKFDITKLMEVHGNATETSAPAPAADEGTKVDRPTE 256
>gi|307095110|gb|ADN29861.1| 40S ribosomal protein S3a [Triatoma matogrossensis]
Length = 269
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 178/234 (76%), Gaps = 5/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F R +GKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTTRQIGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+YRK RL AEDVQ +NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FC
Sbjct: 83 SYRKFRLIAEDVQARNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVRTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+RQIRRKM + + + ++ DL+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDQLSQRKTCYAQHTQVRQIRRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--YSEDVGVKVDRP-ADEP 230
A IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G KV RP A EP
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGSDEPGAKVSRPEAYEP 256
>gi|260947444|ref|XP_002618019.1| 40S ribosomal protein S3aE [Clavispora lusitaniae ATCC 42720]
gi|269969544|sp|C4XZU6.1|RS3A2_CLAL4 RecName: Full=40S ribosomal protein S1-B
gi|238847891|gb|EEQ37355.1| 40S ribosomal protein S3aE [Clavispora lusitaniae ATCC 42720]
Length = 256
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+K+W+DIKAPS F RNVGKTL+ ++ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFARKEWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV + + E+
Sbjct: 202 QSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSSGYKDVVLES 255
>gi|557223|emb|CAA57542.1| ribosomal protein 10 [Candida albicans]
Length = 256
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAP+ F RNVGKTL+ R+ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K T YAQ+S++R+ R+KM EI+ + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQIKETTYAQSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
+I+PLQNV IRKVK+LK PKFD G L+ +HG+ S E+ G KV + + E+
Sbjct: 202 QTIFPLQNVHIRKVKLLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVVLES 255
>gi|126136345|ref|XP_001384696.1| 40S ribosomal protein S1 [Scheffersomyces stipitis CBS 6054]
gi|269969538|sp|A3LUW5.1|RS3A1_PICST RecName: Full=40S ribosomal protein S1-A
gi|126091918|gb|ABN66667.1| 40S ribosomal protein S3aE (S1) [Scheffersomyces stipitis CBS 6054]
Length = 256
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/234 (57%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAPS F RNVGKTL+ R+ G K A++GLK R+ EV+L DL E+H+Y
Sbjct: 22 DPFTRKDWFDIKAPSTFENRNVGKTLINRSTGMKNAADGLKGRIVEVNLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R ++LR ++VQGKN+LTNF G+SFT+DKLRSLVRKW +L+EA V VKT D++ LR+F +
Sbjct: 82 RNVKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPIPEA 234
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ E+ G KV+ + + E+
Sbjct: 202 QTIFPLQNVHIRKVKVLKQPKFDLGALLALHGESGGEEKGRKVNTGFKDVVLES 255
>gi|448089005|ref|XP_004196691.1| Piso0_003916 [Millerozyma farinosa CBS 7064]
gi|448093184|ref|XP_004197722.1| Piso0_003916 [Millerozyma farinosa CBS 7064]
gi|359378113|emb|CCE84372.1| Piso0_003916 [Millerozyma farinosa CBS 7064]
gi|359379144|emb|CCE83341.1| Piso0_003916 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/223 (59%), Positives = 177/223 (79%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+D+KAPS F RNVGKTL+ ++ G K A++GLK R+ EV+L DL E+H+Y
Sbjct: 22 DPFTRKEWFDVKAPSTFENRNVGKTLINKSTGLKNAADGLKGRIVEVNLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV+RT YAQ+S++++IR+KM EIM + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQPNQVRRTTYAQSSKLKEIRKKMIEIMQREVSNSTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKV 223
+I PLQNV IRKVK+LK+PKFDLG LM +HG+ +E+ G KV
Sbjct: 202 QTILPLQNVHIRKVKLLKSPKFDLGSLMSLHGEGATEEKGKKV 244
>gi|260951003|ref|XP_002619798.1| 40S ribosomal protein S3aE [Clavispora lusitaniae ATCC 42720]
gi|269969536|sp|C4XYD5.1|RS3A1_CLAL4 RecName: Full=40S ribosomal protein S1-A
gi|238847370|gb|EEQ36834.1| 40S ribosomal protein S3aE [Clavispora lusitaniae ATCC 42720]
Length = 256
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 175/223 (78%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+K+W+DIKAPS F RNVGKTL+ ++ G K A++GLK RVFEV L DL E+H+Y
Sbjct: 22 DPFARKEWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct: 202 QSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
>gi|395852429|ref|XP_003798741.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Otolemur
garnettii]
gi|395852431|ref|XP_003798742.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Otolemur
garnettii]
Length = 264
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 182/242 (75%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDW D+KAP+ F ++N+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWCDVKAPAMFNIKNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK + EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VD KTTD + L LFC+G
Sbjct: 82 RKFKPITEDVQGKNCLTNFHGMDLTHDKMCSMVKKWQTMIEAHVDGKTTDGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+L NQ+++T YAQ Q+RQI++KM EIM + DLK +V K I + IG++IE+A
Sbjct: 142 FTKKLNNQIRKTSYAQHQQVRQIQKKMMEIMTREVQMNDLKEVVNKLIPDSIGKDIERAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGRSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|72086123|ref|XP_780038.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1
[Strongylocentrotus purpuratus]
Length = 265
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 170/213 (79%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFTKKEWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDV+GKN LTNF GM+ T DK S+V+KW TLI+A +DV+TTD + LRLFCIG
Sbjct: 82 RKFRLMVEDVRGKNCLTNFHGMNLTRDKYCSMVKKWQTLIDANIDVRTTDGYLLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ++Q+R IRRKM EIM + A+ DLK +V K I + I R+IEKA
Sbjct: 142 FTKRRQNQIKKTSYAQSTQVRAIRRKMIEIMARECAANDLKEVVNKLIPDSIARDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V IRKVK+L+ PKFD+ +LME+HG+
Sbjct: 202 HRIYPLHDVHIRKVKVLRKPKFDVSRLMELHGE 234
>gi|209915543|ref|NP_001129593.1| ribosomal protein S3A [Acyrthosiphon pisum]
gi|239793561|dbj|BAH72892.1| ACYPI010127 [Acyrthosiphon pisum]
Length = 266
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 178/243 (73%), Gaps = 10/243 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWY+++AP F R+VGKTLV RTQGTKIASEGLKHRVFEVSL DL ++ E
Sbjct: 23 DPFTRKDWYNVRAPCMFTNRDVGKTLVNRTQGTKIASEGLKHRVFEVSLADLQEDDGAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDV+G+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFKLIAEDVKGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + + ++TCYAQ +Q+R IR+KM E + + DLK +V K + I +EIEK
Sbjct: 143 IGFTSKDQSSTRKTCYAQHTQVRAIRKKMVETITEEIVKSDLKEVVNKLRPDSIAKEIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD------YSEDVGVKVDRPA--DEPI 231
SIYPL +VFIRKVK+LK P+ D+GKLME H D E+ GV+VDRP + P+
Sbjct: 203 KCQSIYPLHDVFIRKVKVLKKPRMDIGKLMEFHSDEGVTTVVDEETGVQVDRPEGYEPPV 262
Query: 232 PEA 234
E+
Sbjct: 263 QES 265
>gi|443725036|gb|ELU12778.1| hypothetical protein CAPTEDRAFT_170468 [Capitella teleta]
Length = 266
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/243 (59%), Positives = 182/243 (74%), Gaps = 11/243 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F +R VGKT+V RT GTK+A++GLK RVFEVS+ DL ++E A+
Sbjct: 23 DPFTKKDWYDVKAPSMFNIRQVGKTVVNRTVGTKLAADGLKGRVFEVSMADL-QDDEVAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+VQG+NVLTNF GMS TTDKLRS+V+KW TLIE V VKTTD + LRLFCIG
Sbjct: 82 RKFRLIAEEVQGRNVLTNFHGMSLTTDKLRSMVKKWQTLIEGNVAVKTTDGYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+++T YA + Q+R IR+KM +IMV + +S LK +V K + + IG++IEKA
Sbjct: 142 FTNRRQNQIRKTSYANSHQVRLIRKKMTDIMVREVSSSSLKEVVNKLLPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP-AD--EPI 231
IYPL +V++RKVKILK PK DLGKL+E++GD + + G KVDR AD EP
Sbjct: 202 QGIYPLHDVYVRKVKILKKPKLDLGKLLEMYGDGPSKATGATGESGEKVDRTVADGYEPA 261
Query: 232 PEA 234
+A
Sbjct: 262 VQA 264
>gi|307176724|gb|EFN66139.1| 40S ribosomal protein S3a [Camponotus floridanus]
Length = 267
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/244 (57%), Positives = 179/244 (73%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R VGKTLV RTQGTKIASEGLK RVFEVSL DL +++ E
Sbjct: 23 DPFTRKDWYDVKAPSMFANRQVGKTLVNRTQGTKIASEGLKFRVFEVSLADLQSDQDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+++IR+KM E + DLK +V K + + ++IEK
Sbjct: 143 IGFTNKDQLSTRKTCYAQHAQVKKIRQKMVETITEDVTKTDLKGVVSKLLPDATAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEP 230
A+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD + D G KVDRP + P
Sbjct: 203 ASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGGNKSEETGDSGSKVDRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|332021354|gb|EGI61728.1| 40S ribosomal protein S3a [Acromyrmex echinatior]
Length = 267
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 140/244 (57%), Positives = 179/244 (73%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R VGKTLV RTQGTKIASEGLK RVFEVSL DL +++ E
Sbjct: 23 DPFTRKDWYDVKAPSMFANRQVGKTLVNRTQGTKIASEGLKFRVFEVSLADLQSDQDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+++IR+KM E + DLK +V K + + ++IEK
Sbjct: 143 IGFTNKDQLSTRKTCYAQHAQVKKIRQKMVETITEDVTKTDLKGVVSKLLPDATAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEP 230
A+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD + D G K+DRP + P
Sbjct: 203 ASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGGNKSEEAGDSGSKIDRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|307211549|gb|EFN87627.1| 40S ribosomal protein S3a [Harpegnathos saltator]
Length = 267
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 181/244 (74%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R VGKTLV RTQGTKIASEGLK RVFEVSL DL +++ E
Sbjct: 23 DPFTRKDWYDVKAPSMFANRQVGKTLVNRTQGTKIASEGLKFRVFEVSLADLQSDQDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+++IR+KM E + DLK +V K + + ++IEK
Sbjct: 143 IGFTNKDQLSTRKTCYAQHAQVKKIRQKMVETITEDVTKTDLKGVVSKLLPDATAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV---GVKVDRPA--DEP 230
A+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD SE+V G K+DRP + P
Sbjct: 203 ASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGSNKSEEVGESGSKIDRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|150984423|gb|ABR87467.1| small subunit ribosomal protein 1 [Koerneria sp. RS1982]
Length = 252
Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 179/238 (75%), Gaps = 6/238 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F R VGKTLV RTQGTKIASEGLK RVFEVSLGDL N E +
Sbjct: 14 DPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASEGLKGRVFEVSLGDL-NGSESDF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL EDVQGKNVLTNF GMSFT DKL S+V+KWHT+IEA VKTTD + LRLFCIG
Sbjct: 73 RKFRLVCEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMIEANAAVKTTDGYLLRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + +QV++T YAQ++++RQIR KM E + + +S DL+ + K I + IG++IEKA
Sbjct: 133 FTSKRQHQVRKTSYAQSAKVRQIRAKMVEHIQKEVSSSDLREVCSKLIPDSIGKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV----GVKVDRPAD-EPIPEA 234
S +YPLQ+V+IRKVKILK P+F+LG+L ++HGD G K+D P D EP +A
Sbjct: 193 SFVYPLQDVYIRKVKILKKPRFELGRLQDMHGDSGVATVGADGEKIDLPDDYEPPVQA 250
>gi|383859003|ref|XP_003704988.1| PREDICTED: 40S ribosomal protein S3a-like [Megachile rotundata]
Length = 267
Score = 285 bits (730), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 181/244 (74%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F R+VGKTLV RTQGTKIASEGLK+RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTNRHVGKTLVNRTQGTKIASEGLKYRVFEVSLADLQNDGDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQHRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+++IR+KM + + DLK +V K + + ++IEK
Sbjct: 143 IGFTNKDQLSTRKTCYAQHAQVKKIRQKMVDTITNDVTKSDLKGVVSKLLPDATAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV---GVKVDRPA--DEP 230
A+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD SE+V G KVDRP + P
Sbjct: 203 ASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGSGSKSEEVGETGSKVDRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|66547340|ref|XP_396741.2| PREDICTED: 40S ribosomal protein S3a [Apis mellifera]
gi|340722992|ref|XP_003399883.1| PREDICTED: 40S ribosomal protein S3a-like [Bombus terrestris]
gi|350423659|ref|XP_003493551.1| PREDICTED: 40S ribosomal protein S3a-like [Bombus impatiens]
gi|380022797|ref|XP_003695223.1| PREDICTED: 40S ribosomal protein S3a-like [Apis florea]
Length = 267
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 181/244 (74%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F R+VGKTLV RTQGTKIASEGLK+RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTNRHVGKTLVNRTQGTKIASEGLKYRVFEVSLADLQNDGDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQHRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+++IR+KM + + DLK +V K + + ++IEK
Sbjct: 143 IGFTNKDQLSTRKTCYAQHAQVKKIRQKMVDTITNDVTKSDLKGVVSKLLPDATAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV---GVKVDRPA--DEP 230
A+ IYPL +V+IRKVK+LK P+F+L KL+E+HGD SE+V G KVDRP + P
Sbjct: 203 ASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGAGSKSEEVGESGSKVDRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|1350980|sp|P49395.2|RS3A_APLCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Lysine-rich
protein KRP-A
gi|471279|emb|CAA48558.1| KRP-A [Aplysia californica]
Length = 265
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/232 (61%), Positives = 177/232 (76%), Gaps = 9/232 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYD+KAPS F VR +GKTLVTR+QGTKIAS+ LK RVFEVSL DL N+E +
Sbjct: 23 DPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDEV-TF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AE+VQG+NVLTNF GMS T DKL S+V+KW TLIEA VDVKTTD + LR+F IG
Sbjct: 82 RKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+TCYAQ +Q++ IR+KM EI+ + +S D+K +V K I + IG++IEK+
Sbjct: 142 FTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------EDVGVKVDR 225
IYPL +V I KVK+LK PKFD+GKLME+HG+ S + G KVDR
Sbjct: 202 QGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDR 253
>gi|51557687|gb|AAU06483.1| ribosomal protein subunit 3 [Culicoides sonorensis]
Length = 265
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 169/215 (78%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F +R VGKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 24 DPFTRKDWYDVKAPSMFAIRQVGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDTDAER 83
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDVQG++VLTNF GM TTDKLRS+V+KW TLIE +VDVKTTD + LR+FC
Sbjct: 84 SFRKFKLIAEDVQGRDVLTNFHGMDLTTDKLRSMVKKWQTLIECHVDVKTTDGYLLRVFC 143
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT++ P ++TCYAQ SQI+ IR+KM +I+ +S DLK +V K + + I ++IEK
Sbjct: 144 IGFTQKDPQSQRKTCYAQHSQIKIIRKKMTDIITRDVSSSDLKEVVNKLLPDSIAKDIEK 203
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
A +YPL + +IRKVK+LK P+FD+ KL+E+HGD
Sbjct: 204 ACLGVYPLHDAYIRKVKVLKKPRFDISKLLELHGD 238
>gi|367012776|ref|XP_003680888.1| 40S ribosomal protein S1 [Torulaspora delbrueckii]
gi|359748548|emb|CCE91677.1| hypothetical protein TDEL_0D00930 [Torulaspora delbrueckii]
Length = 255
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/229 (60%), Positives = 170/229 (74%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WYDIKAPS F+ RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTKKEWYDIKAPSTFKNRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D + LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDEYILRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRTCYAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRTCYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG LM +HG+ + E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLMTLHGEGADEETGKKVSGFKDE 250
>gi|307203090|gb|EFN82270.1| 40S ribosomal protein S3a [Harpegnathos saltator]
Length = 267
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/244 (57%), Positives = 181/244 (74%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R VGKTLV RTQGTKIASEGLK RVFEVSL DL +++ E
Sbjct: 23 DPFTRKDWYDVKAPSMFANRQVGKTLVNRTQGTKIASEGLKFRVFEVSLADLQSDQDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+++IR+KM E + DLK +V K + + ++IEK
Sbjct: 143 IGFTNKDQLSTRKTCYAQHAQVKKIRQKMVETITEDVTKTDLKGVVSKLLPDATAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH----GDYSEDV---GVKVDRPA--DEP 230
A+ IYPL +V+IRKVK+LK P+F+L KL+E+H G+ SE++ G KVDRP + P
Sbjct: 203 ASQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGEGGGNKSEEIGESGSKVDRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|269969632|sp|Q4P4C2.2|RS3A_USTMA RecName: Full=40S ribosomal protein S1
gi|343425925|emb|CBQ69458.1| probable ribosomal protein S3aE [Sporisorium reilianum SRZ2]
Length = 260
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 175/238 (73%), Gaps = 5/238 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAP+ F RNVGKT V R+QG K A + LK R+ E SL DL ++E AY
Sbjct: 21 DPFTRKDWYDIKAPTFFENRNVGKTFVNRSQGLKNADDSLKGRIVEASLADLNKDDEQAY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L+ + +QG+ LTNF+GM FT+DKLRSLVRKW +LIEA+ DVKTTD + LR+F I
Sbjct: 81 RKFKLKVDGIQGRTCLTNFYGMDFTSDKLRSLVRKWQSLIEAHQDVKTTDGYLLRVFVIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+ YA++S IR IR+KM EI+ +A SCDL+ V K I EVIGRE+EKAT
Sbjct: 141 FTKKRANQVKKNTYAKSSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY----SEDVGVKV-DRPADEPIPEA 234
I+PL++V++RKVK+LKAPK DL KL+EVHG +ED GVK + EP P A
Sbjct: 201 QGIFPLKDVYVRKVKVLKAPKDDLNKLLEVHGGAAIAGAEDAGVKARNTEFKEPAPLA 258
>gi|268574272|ref|XP_002642113.1| C. briggsae CBR-RPS-1 protein [Caenorhabditis briggsae]
gi|269969567|sp|A8XSX8.1|RS3A_CAEBR RecName: Full=40S ribosomal protein S3a
Length = 257
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/234 (61%), Positives = 174/234 (74%), Gaps = 5/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +
Sbjct: 21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQGKNVLTNF MS T DKL S+V+KWHTLIEA VKTTD +TLR+F I
Sbjct: 80 RKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIA 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK
Sbjct: 140 FTKKSANQVKKTSYTKTSKIRKIRSEMISCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTC 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KVDRPADEPIP 232
S +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P
Sbjct: 200 SKLYPLQEVYIRKVKIIKRPKIDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
>gi|448089534|ref|XP_004196831.1| Piso0_004057 [Millerozyma farinosa CBS 7064]
gi|448093814|ref|XP_004197862.1| Piso0_004057 [Millerozyma farinosa CBS 7064]
gi|359378253|emb|CCE84512.1| Piso0_004057 [Millerozyma farinosa CBS 7064]
gi|359379284|emb|CCE83481.1| Piso0_004057 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 175/223 (78%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTL+ ++ G K A++GLK R+ EV+L DL E+ ++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRIVEVNLADLQGTEDQSH 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFSIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV+RT YAQTS++R++R+KM E+M + A+ L L K I EV+GREIEK+T
Sbjct: 142 FTKRQPNQVRRTTYAQTSKLREVRKKMIEVMQREVANTTLAQLTSKLIPEVVGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKV 223
+I PLQNV +RKVK+LK+PKFDLG LM +HG+ +E+ G KV
Sbjct: 202 QTILPLQNVHVRKVKLLKSPKFDLGALMSLHGEAATEEKGKKV 244
>gi|119182656|ref|XP_001242450.1| 40S ribosomal protein S1 [Coccidioides immitis RS]
gi|303319335|ref|XP_003069667.1| 40S ribosomal protein S1 [Coccidioides posadasii C735 delta SOWgp]
gi|121754618|sp|Q1DTL7.1|RS3A_COCIM RecName: Full=40S ribosomal protein S1
gi|269969597|sp|C5P7X2.1|RS3A_COCP7 RecName: Full=40S ribosomal protein S1
gi|240109353|gb|EER27522.1| 40S ribosomal protein S3AE, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040895|gb|EFW22828.1| 40S ribosomal protein S3A [Coccidioides posadasii str. Silveira]
gi|392865347|gb|EJB10969.1| 40S ribosomal protein S1 [Coccidioides immitis RS]
Length = 255
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/234 (61%), Positives = 180/234 (76%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F VR+VGKT+V RT G K A++ LK R+FEVSL DL N++ H++
Sbjct: 22 DPFSRKDEYLVKAPSTFAVRDVGKTIVNRTTGLKNANDSLKGRIFEVSLADLQNDQAHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR QVK+T YA++SQIR IR+KM EI+ +A+S L L K + EVIGREIEKAT
Sbjct: 142 FTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 RGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
>gi|312077902|ref|XP_003141505.1| 40S ribosomal protein S3a [Loa loa]
gi|307763334|gb|EFO22568.1| 40S ribosomal protein S3a [Loa loa]
Length = 257
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/234 (60%), Positives = 176/234 (75%), Gaps = 4/234 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F V+++GKTLV RTQGTKIASEGLK RV+EVSLGDL N E +
Sbjct: 20 DPFTRKEWYDIKAPSMFNVQHIGKTLVNRTQGTKIASEGLKGRVYEVSLGDL-NNAESEF 78
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL EDVQG+ LTNF GM T DKL S+V+KWHTLIEA V VKT+D + LRLFCIG
Sbjct: 79 RKMRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIG 138
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + IG++IEKA
Sbjct: 139 FTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKAC 198
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPIP 232
S IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K++RP D P
Sbjct: 199 SYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 252
>gi|170584189|ref|XP_001896891.1| 40S ribosomal protein S3a [Brugia malayi]
gi|269969566|sp|A8PJ38.1|RS3A_BRUMA RecName: Full=40S ribosomal protein S3a
gi|158595739|gb|EDP34263.1| 40S ribosomal protein S3a, putative [Brugia malayi]
Length = 257
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/234 (60%), Positives = 176/234 (75%), Gaps = 4/234 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F V+++GKTLV RTQGTKIASEGLK RV+EVSLGDL N E +
Sbjct: 20 DPFTRKEWYDIKAPSMFNVQHIGKTLVNRTQGTKIASEGLKGRVYEVSLGDL-NNAESEF 78
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL EDVQG+ LTNF GM T DKL S+V+KWHTLIEA V VKT+D + LRLFCIG
Sbjct: 79 RKMRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIG 138
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + IG++IEKA
Sbjct: 139 FTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKAC 198
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPIP 232
S IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K++RP D P
Sbjct: 199 SYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 252
>gi|341896302|gb|EGT52237.1| CBN-RPS-1 protein [Caenorhabditis brenneri]
Length = 257
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/234 (61%), Positives = 174/234 (74%), Gaps = 5/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +
Sbjct: 21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQGKNVLTNF MS T DKL S+V+KWHTLIEA VKTTD +TLR+F I
Sbjct: 80 RKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIA 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK
Sbjct: 140 FTKKSANQVKKTSYTKTSKIRKIRSEMISCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTC 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KVDRPADEPIP 232
S +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P
Sbjct: 200 SKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
>gi|443894175|dbj|GAC71525.1| 40S ribosomal protein S3A [Pseudozyma antarctica T-34]
Length = 260
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/236 (58%), Positives = 174/236 (73%), Gaps = 5/236 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAP+ F RNVGKT V R+QG K A + LK R+ E SL DL ++E AY
Sbjct: 21 DPFTRKDWYDIKAPTFFENRNVGKTFVNRSQGLKNADDSLKGRIVEASLADLNKDDEQAY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L+ + +QG+ LTNF+GM FT+DKLRSLVRKW +LIEA+ DVKTTD + LR+F I
Sbjct: 81 RKFKLKVDGIQGRTCLTNFYGMDFTSDKLRSLVRKWQSLIEAHQDVKTTDGYLLRVFVIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+ YA++S IR IR+KM EI+ +A SCDL+ V K I EVIGRE+EKAT
Sbjct: 141 FTKKRANQVKKNTYAKSSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY----SEDVGVKV-DRPADEPIP 232
I+PL++V++RKVK+LKAPK DL KL+EVHG +ED GVK + EP P
Sbjct: 201 QGIFPLKDVYVRKVKVLKAPKDDLNKLLEVHGGAAIAGAEDAGVKARNTEFKEPAP 256
>gi|390465815|ref|XP_003733470.1| PREDICTED: 40S ribosomal protein S3a-like [Callithrix jacchus]
Length = 264
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/231 (59%), Positives = 176/231 (76%), Gaps = 8/231 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+K P+ F +RN+GKTLVTRT+GTKIAS+GLK RVFEV L DL N+E A+
Sbjct: 23 DPFSKKDWYDVKTPAMFNIRNIGKTLVTRTRGTKIASDGLKGRVFEVGLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQGKN LTNF GM T DKL S+V+KW T+IEA+VDVKTT+ + L LFC+G
Sbjct: 82 RKFKLTAEDVQGKNCLTNFHGMDLTCDKLCSMVKKWQTMIEAHVDVKTTNVYLLSLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ N +++T AQ Q+RQIR+KM EIM + + DLK +V K I + G++IE+A
Sbjct: 142 FTKKRNNLIRKTSDAQHQQVRQIRKKMMEIMTLEVQTNDLKEVVNKLIPDSTGKDIERAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K +R
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKAER 252
>gi|388856206|emb|CCF50197.1| probable ribosomal protein S3aE [Ustilago hordei]
Length = 260
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 174/238 (73%), Gaps = 5/238 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAP+ F RNVGKT V R+QG K A + LK R+ E SL DL ++E AY
Sbjct: 21 DPFTRKDWYDIKAPTFFENRNVGKTFVNRSQGLKNADDSLKGRIVEASLADLNKDDEQAY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L+ + +QG+ LTNF+GM FT+DKLRSLVRKW +LIEA+ DVKTTD + LR+F I
Sbjct: 81 RKFKLKVDGIQGRTCLTNFYGMDFTSDKLRSLVRKWQSLIEAHQDVKTTDGYLLRVFVIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+ YA++S IR IR+KM EI+ +A SCDL+ V K I EVIGRE+EKAT
Sbjct: 141 FTKKRANQVKKNTYAKSSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY----SEDVGVKVDRPA-DEPIPEA 234
I+PL++V++RKVK+LKAPK DL KL+EVHG +ED GVK EP P A
Sbjct: 201 QGIFPLKDVYVRKVKVLKAPKDDLNKLLEVHGGAAIAGAEDAGVKAKATEFKEPAPLA 258
>gi|428672319|gb|EKX73233.1| 40S ribosomal protein S3a, putative [Babesia equi]
Length = 262
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 171/219 (78%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WY++KAP F VRN G+TLVT+T GTK+A++GLK R+FEVSL DL +E+ AY
Sbjct: 22 DPFSRKEWYNLKAPVMFNVRNFGQTLVTKTIGTKLATDGLKGRIFEVSLADLNADEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L EDVQG+N LT+F G S T DKL SL+RK ++LIEA+ DV+T D + LR+FCIG
Sbjct: 82 RKIKLCCEDVQGRNCLTDFHGSSVTRDKLCSLIRKNYSLIEAFADVRTLDGYHLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+TKR P Q+K TCY +TS+IR I +KM +M +A+S L+ LV+K I E IG+EIEKA
Sbjct: 142 YTKRRPGQLKSTCYVRTSKIRLIHKKMVSVMTNEASSSTLRELVKKIIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 220
SI+PLQNV IRK+K+LK PKFDL KLMEVH D S D G
Sbjct: 202 KSIFPLQNVLIRKIKVLKKPKFDLTKLMEVHSDLSGDSG 240
>gi|71021915|ref|XP_761188.1| hypothetical protein UM05041.1 [Ustilago maydis 521]
gi|46100668|gb|EAK85901.1| hypothetical protein UM05041.1 [Ustilago maydis 521]
Length = 315
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 175/238 (73%), Gaps = 5/238 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAP+ F RNVGKT V R+QG K A + LK R+ E SL DL ++E AY
Sbjct: 76 DPFTRKDWYDIKAPTFFENRNVGKTFVNRSQGLKNADDSLKGRIVEASLADLNKDDEQAY 135
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L+ + +QG+ LTNF+GM FT+DKLRSLVRKW +LIEA+ DVKTTD + LR+F I
Sbjct: 136 RKFKLKVDGIQGRTCLTNFYGMDFTSDKLRSLVRKWQSLIEAHQDVKTTDGYLLRVFVIA 195
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+ YA++S IR IR+KM EI+ +A SCDL+ V K I EVIGRE+EKAT
Sbjct: 196 FTKKRANQVKKNTYAKSSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKAT 255
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY----SEDVGVKV-DRPADEPIPEA 234
I+PL++V++RKVK+LKAPK DL KL+EVHG +ED GVK + EP P A
Sbjct: 256 QGIFPLKDVYVRKVKVLKAPKDDLNKLLEVHGGAAIAGAEDAGVKARNTEFKEPAPLA 313
>gi|339242491|ref|XP_003377171.1| 40S ribosomal protein S3a [Trichinella spiralis]
gi|316974046|gb|EFV57584.1| 40S ribosomal protein S3a [Trichinella spiralis]
Length = 262
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 178/240 (74%), Gaps = 8/240 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WY++KAP+ F R++G+T V RTQGTKIASEGLK RV+EVSLGDL N +E +
Sbjct: 23 DPFTRKEWYNVKAPALFMHRDIGQTCVNRTQGTKIASEGLKGRVYEVSLGDL-NNDEADF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL E VQG LTNF GM+FT DKL SLV+KW TLIEA+ DVKTTD + LRLFCIG
Sbjct: 82 RKFRLICEYVQGDTCLTNFHGMNFTRDKLCSLVKKWQTLIEAFADVKTTDGYFLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R P Q K+TCYAQ SQIR I KM EIM + ++ DLK +V+K I + IG++IEKA
Sbjct: 142 FTRRQPEQQKKTCYAQHSQIRAIHVKMVEIMTKEVSNSDLKGVVKKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-----EDVGVKVDRPA--DEPIPEA 234
IYPL +V+IRKVK+LK PKF++ +LME+HG E+VG VDRP D P+ ++
Sbjct: 202 ERIYPLHDVYIRKVKVLKTPKFEMSRLMEMHGLSGKKADEEEVGTFVDRPEGYDPPVLDS 261
>gi|264667441|gb|ACY71306.1| ribosomal protein S3A [Chrysomela tremula]
Length = 269
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/246 (58%), Positives = 179/246 (72%), Gaps = 13/246 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R VGKTLV RTQGT+IASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFATRQVGKTLVNRTQGTRIASEGLKSRVFEVSLADLQNDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+YRK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA DVKT+D + LR+FC
Sbjct: 83 SYRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEASADVKTSDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + P+ ++TCYAQ +Q+R IR+KM EI+ D+K +V K + + I ++IEK
Sbjct: 143 IGFTNKDPSSQRKTCYAQHTQVRAIRKKMVEIITRDIQGSDIKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH---------GDYSEDVGVKVDRPA--D 228
A IYPL +V+IRKVK+LK P+FDL KL+E+H G+ S + G KVDRP +
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFDLSKLLELHGDGGGKGGAGEGSGEAGSKVDRPEGYE 262
Query: 229 EPIPEA 234
P+ EA
Sbjct: 263 PPVQEA 268
>gi|50424385|ref|XP_460779.1| 40S ribosomal protein S1 [Debaryomyces hansenii CBS767]
gi|74659150|sp|Q6BLZ2.1|RS3A2_DEBHA RecName: Full=40S ribosomal protein S1-B
gi|49656448|emb|CAG89120.1| DEHA2F09614p [Debaryomyces hansenii CBS767]
Length = 256
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/234 (57%), Positives = 177/234 (75%), Gaps = 1/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+W+DIKAPS F R VGKTL+ R+ G K A++GLK RV EV L DL E+H+
Sbjct: 22 DPFTKKEWFDIKAPSTFENRAVGKTLINRSTGLKNAADGLKGRVVEVCLADLQGSEDHSS 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FTTDKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSLVRKWQSLVEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
+I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV + + EA
Sbjct: 202 QTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSAGFKDVVLEA 255
>gi|70909555|emb|CAJ17199.1| ribosomal protein S3Ae [Georissus sp. APV-2005]
Length = 267
Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 140/244 (57%), Positives = 180/244 (73%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F + +GKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTTKQIGKTLVNRTQGTKIASEGLKFRVFEVSLTDLQNDNDGER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AE +QG NVLTNF GM TTDKLRS+V+KW TLIEA DVKTTD + LR+FC
Sbjct: 83 SFRKFKLIAESIQGTNVLTNFHGMDLTTDKLRSMVKKWQTLIEASADVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + + TCYAQ +Q+RQIR+KM I+ + ++C+LK +V K + + I ++IEK
Sbjct: 143 IGFTNKDQVSQRETCYAQHTQVRQIRQKMVSIINSNISNCELKDVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------DVGVKVDRPA--DEP 230
A IYPL +V+IRKVK+LK P+FDL KLME+HGD ++ + GVKV+RP + P
Sbjct: 203 ACLGIYPLHDVYIRKVKVLKKPRFDLSKLMELHGDSAKGGTTETEEGGVKVNRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|358348324|ref|XP_003638197.1| 40S ribosomal protein S3a [Medicago truncatula]
gi|355504132|gb|AES85335.1| 40S ribosomal protein S3a [Medicago truncatula]
Length = 159
Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/159 (83%), Positives = 147/159 (92%)
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M+FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCIGFTKR NQVKRTCYAQ+SQIR
Sbjct: 1 MNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIR 60
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
QIRRKM EIM+ QA+SCDLK LV KFI E+IG+EIEKATSSIYPLQNVFIRKVKILKAPK
Sbjct: 61 QIRRKMVEIMINQASSCDLKGLVHKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPK 120
Query: 203 FDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
FDLGKLMEVHGDY+EDVG KV+RPADE + E PTE++GA
Sbjct: 121 FDLGKLMEVHGDYNEDVGTKVERPADEMVTEEPTEIVGA 159
>gi|225713754|gb|ACO12723.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis]
gi|290462159|gb|ADD24127.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis]
gi|290562139|gb|ADD38466.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis]
Length = 265
Score = 283 bits (723), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/235 (57%), Positives = 179/235 (76%), Gaps = 12/235 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAP+ F+VR VGKTLV RTQGT+IAS+GLK RV+EVSL DL +E E
Sbjct: 22 DPFTRKDWYDVKAPTIFKVREVGKTLVNRTQGTRIASDGLKGRVYEVSLADLQSETDAER 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+++K +L EDVQG+N LTNF+GM+ TTDKLRS+V+KW TLIEA+ DVKTTD + +R FC
Sbjct: 82 SFKKFKLICEDVQGRNCLTNFYGMNLTTDKLRSVVKKWQTLIEAHADVKTTDGYLIRAFC 141
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
IGFT R PNQ + CYAQ+ QIRQIR+KM +IM + +SCDLK +V+K I + + +++
Sbjct: 142 IGFTSRQSPNQ--KACYAQSQQIRQIRKKMVDIMTREISSCDLKEVVKKLIPDSMAVDVQ 199
Query: 179 KATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP 226
KA IYPL +V+IRKVK+LK P+FDL KLM++HG+ S + G ++RP
Sbjct: 200 KACRGIYPLHDVYIRKVKVLKKPRFDLNKLMDLHGEGSGKTTTTDPNTGETIERP 254
>gi|296197682|ref|XP_002746385.1| PREDICTED: 40S ribosomal protein S3a-like [Callithrix jacchus]
Length = 263
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 138/231 (59%), Positives = 177/231 (76%), Gaps = 9/231 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GK LVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKMLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW +IEA+VDVKTT + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQ-MIEAHVDVKTTGGYLLRLFCVG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K+I + IG+++EK
Sbjct: 141 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTQEVQTNDLKEVVNKWIPDSIGKDMEKPC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
S+YPL +V +RKVK+LK PKFDLGKLME+ G+ S ++ G KV+R
Sbjct: 201 QSVYPLHDVSVRKVKMLKKPKFDLGKLMELRGEGSSSGKATDDETGAKVER 251
>gi|344299980|gb|EGW30320.1| hypothetical protein SPAPADRAFT_143639 [Spathaspora passalidarum
NRRL Y-27907]
Length = 260
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 164/211 (77%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYDIKAP+ F RNVGKTL+TR G + + GLK RV +V L DL E+H+Y
Sbjct: 22 DPFTKKDWYDIKAPTTFENRNVGKTLITRPTGRRSVAGGLKGRVVDVCLADLQGTEDHSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FT+DK+RSLVRKW TLIEA V VKTTD++ LR+F IG
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTSDKMRSLVRKWQTLIEANVTVKTTDDYVLRVFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ K+ YAQ+S+IR+IR+KM ++M + ++ L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQTKKATYAQSSKIREIRKKMVDVMKKEVSNVTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
+IYPLQNV IRKVK+LK PKFDLG L+ +H
Sbjct: 202 QTIYPLQNVHIRKVKLLKQPKFDLGALLALH 232
>gi|17553700|ref|NP_497910.1| Protein RPS-1 [Caenorhabditis elegans]
gi|1350982|sp|P48154.2|RS3A_CAEEL RecName: Full=40S ribosomal protein S3a
gi|3877714|emb|CAA83605.1| Protein RPS-1 [Caenorhabditis elegans]
Length = 257
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 145/234 (61%), Positives = 174/234 (74%), Gaps = 5/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +
Sbjct: 21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQGKNVLTNF MS T DKL S+V+KWHTLIEA VKTTD +TLR+F I
Sbjct: 80 RKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIA 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK
Sbjct: 140 FTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTC 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KVDRPADEPIP 232
S +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P
Sbjct: 200 SKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
>gi|399216818|emb|CCF73505.1| unnamed protein product [Babesia microti strain RI]
Length = 262
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 137/228 (60%), Positives = 175/228 (76%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F KK+WY++KAP F VRN GKTLVTR+ GTK+A++ LK R++EV+L DL +E+ AY
Sbjct: 22 DVFTKKEWYNLKAPVMFHVRNFGKTLVTRSSGTKLATDALKGRIYEVNLADLNADEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+ L E+VQGK LT+F GMS T DKL SLVRK ++LIEA+ DVKT D + LRLFCIG
Sbjct: 82 RKMSLCCEEVQGKTCLTDFHGMSITRDKLCSLVRKHYSLIEAFTDVKTLDGYHLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+TKR Q+K TCYAQTSQ ++IR++M E M +A++ LK LV+K I E IG+EIEK+
Sbjct: 142 YTKRSMGQLKSTCYAQTSQKKRIRKRMVETMQREASTVTLKDLVKKLIPESIGKEIEKSC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 229
SI+PLQNV IRKVK+LK PKFD+ KLMEVH D +ED+GV V ++E
Sbjct: 202 KSIFPLQNVLIRKVKVLKKPKFDISKLMEVHKDATEDMGVPVVAESEE 249
>gi|50420679|ref|XP_458876.1| 40S ribosomal protein S1 [Debaryomyces hansenii CBS767]
gi|74659350|sp|Q6BSE4.1|RS3A1_DEBHA RecName: Full=40S ribosomal protein S1-A
gi|49654543|emb|CAG87028.1| DEHA2D09460p [Debaryomyces hansenii CBS767]
Length = 256
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/223 (59%), Positives = 173/223 (77%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+W+DIKAPS F R VGKTL+ R+ G K A++GLK RV EV L DL E+H+
Sbjct: 22 DPFTKKEWFDIKAPSTFENRAVGKTLINRSTGLKNAADGLKGRVVEVCLADLQGSEDHSS 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FTTDKLRSLVRKW +L+EA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSLVRKWQSLVEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
+I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV
Sbjct: 202 QTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
>gi|74897559|sp|Q56FG9.1|RS3A_LYSTE RecName: Full=40S ribosomal protein S3a
gi|62083417|gb|AAX62433.1| ribosomal protein S3a [Lysiphlebus testaceipes]
Length = 266
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/243 (57%), Positives = 174/243 (71%), Gaps = 10/243 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYDIKAPS F R VGKTLV RTQGTKIASEGLK RV EVSL DL ++ E
Sbjct: 23 DPFTRKDWYDIKAPSMFTTRQVGKTLVNRTQGTKIASEGLKGRVVEVSLADLQSDADAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL EDVQ ++VL NF GM TTDKLRS+V+KW TLIEA+VDVKTTD + LR+FC
Sbjct: 83 SFRKFRLIVEDVQNRSVLCNFHGMDLTTDKLRSMVKKWQTLIEAHVDVKTTDGYLLRIFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT++ ++T YAQ SQ+R IRRKM I+ + CDLK +V K + + I ++IEK
Sbjct: 143 IGFTQKDQMSTRKTSYAQHSQVRNIRRKMVSIVTDEITKCDLKGVVTKLVPDAIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE------DVGVKVDRPA--DEPI 231
A IYPL +V+IRKVK+LK P+F+L KL+E+HGD + G KVDRP + P+
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGSKTGEVGETGSKVDRPEGYEPPV 262
Query: 232 PEA 234
E
Sbjct: 263 QET 265
>gi|91084673|ref|XP_968064.1| PREDICTED: similar to S3Ae ribosomal protein [Tribolium castaneum]
gi|270008925|gb|EFA05373.1| hypothetical protein TcasGA2_TC015539 [Tribolium castaneum]
Length = 267
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/244 (57%), Positives = 174/244 (71%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R VGKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFATRQVGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEASADVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ DLK +V K + + I ++IEK
Sbjct: 143 IGFTNKDQLSQRKTCYAQHTQVRGIRKKMVEIITRDITGSDLKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH-------GDYSEDVGVKVDRPA--DEP 230
A IYPL +V+IRKVK+LK P+F+L KL+E+H + G KVDRP + P
Sbjct: 203 ACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGKGGSGEPGEAGAKVDRPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|67624709|ref|XP_668637.1| 40S ribosomal protein S3A [Cryptosporidium hominis TU502]
gi|75002574|sp|Q5CP76.1|RS3A_CRYHO RecName: Full=40S ribosomal protein S3a
gi|54659838|gb|EAL38400.1| 40S ribosomal protein S3A [Cryptosporidium hominis]
Length = 262
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 173/224 (77%), Gaps = 2/224 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP ++K++YD++APS F+VRN G T+ ++ QGTK+A + L+HRV+EVSL DL N+E+ A+
Sbjct: 22 DPLSRKEFYDLRAPSTFKVRNFGTTIASKNQGTKLAVDALRHRVYEVSLADLNNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L+ ED+QG+ LT F GM T DKL SL+RK+ TLIEA+ +VKT+D + LRLFCI
Sbjct: 82 RKIKLQCEDIQGRTCLTEFHGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDGYVLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R+ +QVK TCYAQTSQIRQIR+KM EI+ A+A L+ LV+KFI E IG+EIEKA
Sbjct: 142 FTRRMADQVKSTCYAQTSQIRQIRKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH--GDYSEDVGVKV 223
I+PLQ+VFIRKVK+L P FD+ +LME H D E+ G KV
Sbjct: 202 RHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEEKGTKV 245
>gi|161669200|gb|ABX75452.1| 40S ribosomal protein S3a [Lycosa singoriensis]
Length = 223
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 161/202 (79%), Gaps = 1/202 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYD+KAP F VRNVGKTLV RTQGTKIASEGLK RVFE+SL DL N+E A+
Sbjct: 23 DPFTRKDWYDVKAPVMFSVRNVGKTLVNRTQGTKIASEGLKGRVFEISLADLQNDE-IAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FCIG
Sbjct: 82 RKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ QVK+TCYAQ +Q++ IR+KM E M+ + +S DLK +V K I + IGR+IEKA
Sbjct: 142 FTKKWATQVKKTCYAQHTQVKLIRKKMTETMIREVSSSDLKEVVNKLIPDSIGRDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKF 203
IYPL +V IRKVK+LK PK
Sbjct: 202 QGIYPLHDVMIRKVKVLKKPKI 223
>gi|66357444|ref|XP_625900.1| 40S ribosomal protein S3A [Cryptosporidium parvum Iowa II]
gi|46226833|gb|EAK87799.1| putative 40S ribosomal protein S3A [Cryptosporidium parvum Iowa II]
gi|323509057|dbj|BAJ77421.1| cgd4_3160 [Cryptosporidium parvum]
gi|323509967|dbj|BAJ77876.1| cgd4_3160 [Cryptosporidium parvum]
Length = 262
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 173/224 (77%), Gaps = 2/224 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP ++K++YD++APS F+VRN G T+ ++ QGTK+A + L+HRV+EVSL DL N+E+ A+
Sbjct: 22 DPLSRKEFYDLRAPSTFKVRNFGTTIASKNQGTKLAVDALRHRVYEVSLADLNNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L+ ED+QG+ LT F GM T DKL SL+RK+ TLIEA+ +VKT+D + LRLFCI
Sbjct: 82 RKIKLQCEDIQGRTCLTEFHGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDGYVLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R+ +QVK TCYAQTSQIRQIR+KM EI+ A+A L+ LV+KFI E IG+EIEKA
Sbjct: 142 FTRRMADQVKSTCYAQTSQIRQIRKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH--GDYSEDVGVKV 223
I+PLQ+VFIRKVK+L P FD+ +LME H D E+ G KV
Sbjct: 202 RHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEEKGTKV 245
>gi|254579146|ref|XP_002495559.1| 40S ribosomal protein S1 [Zygosaccharomyces rouxii]
gi|269969619|sp|C5DS65.1|RS3A_ZYGRC RecName: Full=40S ribosomal protein S1
gi|238938449|emb|CAR26626.1| ZYRO0B14234p [Zygosaccharomyces rouxii]
Length = 254
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/228 (58%), Positives = 167/228 (73%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KK+WYDIKAPS F+ RNVGKTLV R+ G K AS+ LK RV E L DL E+H++
Sbjct: 22 DPFSKKEWYDIKAPSTFKNRNVGKTLVNRSAGLKSASDTLKGRVVEACLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTN GM FTTDK RS+VRKW TLIEA V VKT+D + +R+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNIHGMDFTTDKYRSMVRKWQTLIEAQVTVKTSDEYVIRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ PNQVK+TCYAQ+S IR IR+ EI+ + + L K I EVI +E+E AT
Sbjct: 142 FTRKQPNQVKKTCYAQSSHIRAIRKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 229
I+PLQNV +RKVK+LK PKFDLG LM +HG+ S++ G KV DE
Sbjct: 202 KDIFPLQNVHVRKVKLLKQPKFDLGSLMALHGEGSDETGKKVSGFKDE 249
>gi|321478570|gb|EFX89527.1| hypothetical protein DAPPUDRAFT_303071 [Daphnia pulex]
Length = 267
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 167/213 (78%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYDIKAPS F VR VGKTLV RTQGT+IASEGLK RVFEVSL DL NE E
Sbjct: 23 DPFTRKDWYDIKAPSMFAVRQVGKTLVNRTQGTRIASEGLKGRVFEVSLTDLQNESDSER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
A+RK +L +EDVQG+N+LTNF GM TTDKLRS+V+KW +LIEA V+VKT+D + LR+FC
Sbjct: 83 AFRKFKLISEDVQGRNLLTNFHGMDMTTDKLRSMVKKWQSLIEASVEVKTSDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFTK+ ++TCYAQ +QI+ IR+KM +I+ + S DLK +V K I + I ++IEK
Sbjct: 143 IGFTKKEAESTRKTCYAQHAQIKSIRKKMVDIITREVGSVDLKEVVSKLIPDSISKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
+ IYPL +V IRKVK+LK PKFD+GKL+E+H
Sbjct: 203 SCQGIYPLHDVNIRKVKVLKKPKFDIGKLLELH 235
>gi|296226533|ref|XP_002758973.1| PREDICTED: 40S ribosomal protein S3a-like [Callithrix jacchus]
Length = 263
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 181/241 (75%), Gaps = 9/241 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGT+IAS+GLK RVFE SL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTQIASDGLKGRVFEGSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R+ +L ED QGKN L NF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 REFKLITEDAQGKNCLPNFHGMDLTHDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+ +T +AQ Q+RQI +KM EIM + + DLK V+K I + G++IE+A
Sbjct: 142 FTKKRNNQIWKTSHAQHQQVRQIWKKMTEIMTREMQTNDLKEAVDKLILDSTGKDIEQAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS------EDVGVKVDRPA--DEPIPE 233
SIYPL +VF+RKVK+LK P+F+LGKLME+HG+ S ++ G KV+R + P+ E
Sbjct: 202 RSIYPLHDVFVRKVKMLKKPRFELGKLMELHGEGSSGKATGDETGAKVERADGYEPPVQE 261
Query: 234 A 234
+
Sbjct: 262 S 262
>gi|365986056|ref|XP_003669860.1| ribosomal protein S1 [Naumovozyma dairenensis CBS 421]
gi|365991158|ref|XP_003672408.1| ribosomal protein S1 [Naumovozyma dairenensis CBS 421]
gi|343768629|emb|CCD24617.1| hypothetical protein NDAI_0D03030 [Naumovozyma dairenensis CBS 421]
gi|343771183|emb|CCD27165.1| hypothetical protein NDAI_0J02730 [Naumovozyma dairenensis CBS 421]
Length = 255
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/231 (58%), Positives = 170/231 (73%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRT YAQ+S IR IR+ + EI+ + +C L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRTAYAQSSHIRAIRKVISEILTREVQNCTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPI 231
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV DE +
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEASGEEKGKKVSGFKDEVL 252
>gi|50303635|ref|XP_451759.1| 40S ribosomal protein S1 [Kluyveromyces lactis NRRL Y-1140]
gi|74660659|sp|Q6CWD0.1|RS3A_KLULA RecName: Full=40S ribosomal protein S1
gi|49640891|emb|CAH02152.1| KLLA0B05060p [Kluyveromyces lactis]
Length = 255
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 170/229 (74%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWYDIKAPSTFENRNVGKTLVNKSVGLKNASDSLKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRT YAQ+S IRQIR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRTSYAQSSHIRQIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLLSLHGEASAEEKGKKVAGFKDE 250
>gi|258571463|ref|XP_002544535.1| 40S ribosomal protein S3aE [Uncinocarpus reesii 1704]
gi|237904805|gb|EEP79206.1| 40S ribosomal protein S3aE [Uncinocarpus reesii 1704]
Length = 256
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/234 (60%), Positives = 179/234 (76%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F R+VGKT+V RT G K A++ LK R+FEVSL DL N++ H++
Sbjct: 23 DPFSRKDEYLVKAPSTFATRDVGKTIVNRTVGLKNANDSLKGRIFEVSLADLQNDQAHSF 82
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I
Sbjct: 83 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIA 142
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR QVK+T YA++SQIR IR+KM EI+ +A++ L L K + EVIGREIEKAT
Sbjct: 143 FTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASTRTLTQLT-KLVPEVIGREIEKAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFD+G L+ +HG+ S +D G KV+R E + E+
Sbjct: 202 RGIYPLQNVHIRKVKLLKQPKFDIGALLALHGESSTDDKGQKVEREFKEQVLES 255
>gi|302420984|ref|XP_003008322.1| 40S ribosomal protein S1 [Verticillium albo-atrum VaMs.102]
gi|261351468|gb|EEY13896.1| 40S ribosomal protein S3aE [Verticillium albo-atrum VaMs.102]
Length = 247
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 173/233 (74%), Gaps = 10/233 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFSRKDWYQIKAPAPFAVRDVGKTLVNRTTGLKNANDALKGRILEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK GKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RK---------GKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R PNQVK+T YA +SQIR IRRKM EI+ +A++C L L K I EVIGREIEK+T
Sbjct: 133 FTRRRPNQVKKTTYAASSQIRAIRRKMVEIIQREASTCTLTQLTNKLIPEVIGREIEKST 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPIPE 233
IYP QNV IRKVK+LK+PKFDLG LM +HG+ +++ G K++R E + E
Sbjct: 193 QGIYPPQNVHIRKVKLLKSPKFDLGSLMALHGESVTDEQGQKIEREFKERVLE 245
>gi|441619350|ref|XP_004088582.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
Length = 226
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A
Sbjct: 22 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-A 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFD 204
SIYPL +VF+RKVK+LK PKF+
Sbjct: 201 CQSIYPLHDVFVRKVKMLKKPKFE 224
>gi|366987561|ref|XP_003673547.1| hypothetical protein NCAS_0A06060 [Naumovozyma castellii CBS 4309]
gi|366997508|ref|XP_003678516.1| hypothetical protein NCAS_0J01990 [Naumovozyma castellii CBS 4309]
gi|342299410|emb|CCC67164.1| hypothetical protein NCAS_0A06060 [Naumovozyma castellii CBS 4309]
gi|342304388|emb|CCC72178.1| hypothetical protein NCAS_0J01990 [Naumovozyma castellii CBS 4309]
Length = 255
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 169/229 (73%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + +C L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHAYAQSSHIRSIRKVISEILTKEVQNCTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEASGEEKGKKVSGFKDE 250
>gi|269969631|sp|C4JMJ4.2|RS3A_UNCRE RecName: Full=40S ribosomal protein S1
Length = 255
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/234 (60%), Positives = 179/234 (76%), Gaps = 2/234 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F R+VGKT+V RT G K A++ LK R+FEVSL DL N++ H++
Sbjct: 22 DPFSRKDEYLVKAPSTFATRDVGKTIVNRTVGLKNANDSLKGRIFEVSLADLQNDQAHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I
Sbjct: 82 RKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR QVK+T YA++SQIR IR+KM EI+ +A++ L L K + EVIGREIEKAT
Sbjct: 142 FTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASTRTLTQLT-KLVPEVIGREIEKAT 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVK+LK PKFD+G L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 RGIYPLQNVHIRKVKLLKQPKFDIGALLALHGESSTDDKGQKVEREFKEQVLES 254
>gi|332374748|gb|AEE62515.1| unknown [Dendroctonus ponderosae]
Length = 267
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 177/244 (72%), Gaps = 11/244 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +K+WYD+KAPS F R VGKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKEWYDVKAPSMFTSRQVGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+ VLTNF GM TTDKLRS+V+KW +LIEA DVKT+D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRYVLTNFHGMDLTTDKLRSMVKKWQSLIEASADVKTSDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKR-TCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
IGFT++ +R TCYAQ +QIRQIR+KM EI+ DLK +V K + + I ++IE
Sbjct: 143 IGFTQKDTQFSQRKTCYAQHTQIRQIRKKMVEIITRDIQGSDLKEVVNKLLPDSIAKDIE 202
Query: 179 KATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD------YSEDVGVKVDRPA--DEP 230
KA IYPL +VFIRKVK+LK P+++L KL+E+HGD S D G +V RP + P
Sbjct: 203 KACQGIYPLHDVFIRKVKVLKKPRYELSKLLELHGDAKGTTEASGDAGAQVARPEGYEPP 262
Query: 231 IPEA 234
+ E+
Sbjct: 263 VQES 266
>gi|119597985|gb|EAW77579.1| hCG33299, isoform CRA_c [Homo sapiens]
Length = 253
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 178/242 (73%), Gaps = 21/242 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRKNQIRKTSYAQHQQVRQIRKKMMEIMIREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF F+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVF-----------FELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 250
Query: 233 EA 234
E+
Sbjct: 251 ES 252
>gi|190336363|gb|ACE74674.1| ribosomal protein S3A [Caenorhabditis brenneri]
Length = 257
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 144/234 (61%), Positives = 172/234 (73%), Gaps = 5/234 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +
Sbjct: 21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK + AEDVQGKNVLTNF MS T DKL S+V+KWHTLIEA VKTTD +TLR+F I
Sbjct: 80 RKFKPIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIA 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK
Sbjct: 140 FTKKSANQVKKTSYTKTSKIRKIRSEMISCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTC 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KVDRPADEPIP 232
S YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P
Sbjct: 200 SKPYPLQEVYIRKVKIIKRPKVDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
>gi|156096901|ref|XP_001614484.1| 40S ribosomal protein S3a [Plasmodium vivax Sal-1]
gi|269969604|sp|A5K7J8.1|RS3A_PLAVS RecName: Full=40S ribosomal protein S3a
gi|148803358|gb|EDL44757.1| 40S ribosomal protein S3a, putative [Plasmodium vivax]
Length = 262
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 137/243 (56%), Positives = 177/243 (72%), Gaps = 7/243 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+WYD+KAP F VRN GKTLVT+T G K+A++GLK R++EV+L DL N+E+ A
Sbjct: 21 TDVFTKKEWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KI+L + + K+ T+F G+S T DKL SL+RK +TLIE Y DVKT DN+ LR+FCI
Sbjct: 81 HKKIKLCCDHIINKDCYTDFCGLSITRDKLCSLIRKGYTLIEGYTDVKTIDNYQLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK
Sbjct: 141 AFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMNAEASKVMLKDLVKKFIPESIGKEVEKQ 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA--PTEV 238
IYPLQNV IRKVKILK PK D+ KLME+H D ED G V + +PE+ T +
Sbjct: 201 CKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV-----KSLPESKEATNI 255
Query: 239 IGA 241
+ A
Sbjct: 256 LSA 258
>gi|209877955|ref|XP_002140419.1| 40S ribosomal protein S3a [Cryptosporidium muris RN66]
gi|209556025|gb|EEA06070.1| 40S ribosomal protein S3a, putative [Cryptosporidium muris RN66]
Length = 262
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 172/224 (76%), Gaps = 2/224 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP +K++YD++APS F+VRN G T+ ++ QGTK+A + L+HRV+EVSL DL N+E+ A+
Sbjct: 22 DPLCRKEFYDLRAPSIFKVRNFGTTIASKNQGTKLAVDSLRHRVYEVSLADLNNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L+ ED QG+ LT F+GM T DKL SL+RK+ TLIEA+ +VKT+D + LRLFCI
Sbjct: 82 RKIKLQCEDTQGRTCLTEFYGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDGYVLRLFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R+ +QVK TCYAQTSQIRQIRRKM EI+ A+A +L+ LV KFI E IG+EIEK
Sbjct: 142 FTRRMADQVKSTCYAQTSQIRQIRRKMVEIITAEAEGTNLRDLVRKFIPESIGKEIEKVC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG--DYSEDVGVKV 223
I+PLQ+VFIRKVK+L P FD+ +LME H D +E+ G KV
Sbjct: 202 RHIFPLQHVFIRKVKVLSKPSFDVFRLMESHVGIDGTEEKGSKV 245
>gi|402880747|ref|XP_003903956.1| PREDICTED: 40S ribosomal protein S3a-like isoform 8 [Papio anubis]
Length = 268
Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ +RN+GK LVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 43 DPFSKKDWYDMKAPAMSNIRNIGKALVTRTQGTKIASDGLKRRVFEVSLADLQNDEV-AF 101
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK L EDVQ KN LTNF GM T K+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 102 RKFTLITEDVQDKNCLTNFHGMDLTRGKMYSMVKKWQTMIEAHVDVKTTDGYLLHLFCVG 161
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T AQ Q+RQIR+KM EIM + + DLK +V K I + G++IEKA
Sbjct: 162 FTKKRNNQIRKTSCAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSTGKDIEKAC 221
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
SIYPL +VF+RKV++LK PKF+LGKLME+HG+
Sbjct: 222 QSIYPLHDVFVRKVQMLKKPKFELGKLMELHGE 254
>gi|118783831|ref|XP_313275.3| AGAP003532-PA [Anopheles gambiae str. PEST]
gi|108884803|sp|P52813.3|RS3A_ANOGA RecName: Full=40S ribosomal protein S3a; AltName: Full=C3 protein
gi|116128662|gb|EAA08803.3| AGAP003532-PA [Anopheles gambiae str. PEST]
Length = 269
Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/236 (58%), Positives = 170/236 (72%), Gaps = 11/236 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAP+ F+ R VGKTLV RTQGTKIAS+GLK RVFEVSL DL NE E
Sbjct: 23 DPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AE V G++VLTNF GM+ TTDKLRS+V+KW TLIE VDVKTTD F LR+FC
Sbjct: 83 SFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI+ IR KM I+ + S DLK +VEK + + I ++IEK
Sbjct: 143 IGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV---------GVKVDRP 226
A +YPL +V+IRKVK+LK P+FDL LME+HGD GV VDRP
Sbjct: 203 ACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVVDRP 258
>gi|221055353|ref|XP_002258815.1| 40s ribosomal protein s3a [Plasmodium knowlesi strain H]
gi|269969603|sp|B3L3W7.1|RS3A_PLAKH RecName: Full=40S ribosomal protein S3a
gi|193808885|emb|CAQ39588.1| 40s ribosomal protein s3a, putative [Plasmodium knowlesi strain H]
Length = 262
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 137/243 (56%), Positives = 177/243 (72%), Gaps = 7/243 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+WYD+KAP F VRN GKTLVT+T G K+A++GLK R++EV+L DL N+E+ A
Sbjct: 21 TDVFTKKEWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KI+L + + K+ T+F G+S T DKL SL+RK +TLIE Y DVKT DN+ LR+FCI
Sbjct: 81 HKKIKLCCDHIINKDCYTDFCGLSITRDKLCSLIRKGYTLIEGYTDVKTIDNYQLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK
Sbjct: 141 AFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMNAEASKVLLKDLVKKFIPESIGKEVEKQ 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA--PTEV 238
IYPLQNV IRKVKILK PK D+ KLME+H D ED G V + +PE+ T +
Sbjct: 201 CKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV-----KSLPESKEATNI 255
Query: 239 IGA 241
+ A
Sbjct: 256 LSA 258
>gi|402880733|ref|XP_003903949.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Papio anubis]
gi|402880735|ref|XP_003903950.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Papio anubis]
gi|402880737|ref|XP_003903951.1| PREDICTED: 40S ribosomal protein S3a-like isoform 3 [Papio anubis]
gi|402880741|ref|XP_003903953.1| PREDICTED: 40S ribosomal protein S3a-like isoform 5 [Papio anubis]
gi|402880743|ref|XP_003903954.1| PREDICTED: 40S ribosomal protein S3a-like isoform 6 [Papio anubis]
gi|402880745|ref|XP_003903955.1| PREDICTED: 40S ribosomal protein S3a-like isoform 7 [Papio anubis]
Length = 271
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ +RN+GK LVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 43 DPFSKKDWYDMKAPAMSNIRNIGKALVTRTQGTKIASDGLKRRVFEVSLADLQNDEV-AF 101
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK L EDVQ KN LTNF GM T K+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 102 RKFTLITEDVQDKNCLTNFHGMDLTRGKMYSMVKKWQTMIEAHVDVKTTDGYLLHLFCVG 161
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T AQ Q+RQIR+KM EIM + + DLK +V K I + G++IEKA
Sbjct: 162 FTKKRNNQIRKTSCAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSTGKDIEKAC 221
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
SIYPL +VF+RKV++LK PKF+LGKLME+HG+
Sbjct: 222 QSIYPLHDVFVRKVQMLKKPKFELGKLMELHGE 254
>gi|254573696|ref|XP_002493957.1| 40S ribosomal protein S1 [Komagataella pastoris GS115]
gi|269969602|sp|C4R853.1|RS3A_PICPG RecName: Full=40S ribosomal protein S1
gi|238033756|emb|CAY71778.1| Ribosomal protein 10 (rp10) of the small (40S) subunit
[Komagataella pastoris GS115]
gi|328354223|emb|CCA40620.1| 40S ribosomal protein S3a-2 [Komagataella pastoris CBS 7435]
Length = 256
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/233 (57%), Positives = 172/233 (73%), Gaps = 1/233 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAP+ F RNVGKTL+ ++ G K A +GLK RV EVSL DL E+H++
Sbjct: 22 DPFQRKEWYDIKAPTTFENRNVGKTLINKSTGLKNAVDGLKGRVVEVSLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+KI+LR ++VQGKN+LTNF G FT+DK+RSLVRKW +L+EA V VKT D++ LR+FCI
Sbjct: 82 KKIKLRVDEVQGKNLLTNFHGFDFTSDKVRSLVRKWQSLVEANVTVKTADDYVLRIFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQ+K+T YAQ+SQ+ IR+KM EIM + ++ L L K I EVIGREIEKA
Sbjct: 142 FTRRHQNQIKKTTYAQSSQLSAIRKKMVEIMQREVSNVTLAQLTSKLIPEVIGREIEKAA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPIPE 233
IYPLQNV IRKVK+LK KFDLG L+ +HG+ +E+ G KV + + E
Sbjct: 202 EGIYPLQNVHIRKVKVLKQAKFDLGALLALHGESVTEENGKKVGSEFQDVVLE 254
>gi|269969558|sp|A7L6A0.1|RS3A_ARTSF RecName: Full=40S ribosomal protein S3a
gi|151579926|gb|ABS18355.1| 40S ribosomal protein S3a [Artemia franciscana]
Length = 268
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/245 (57%), Positives = 180/245 (73%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE--H 59
DPF +KDWYD+KAPS F R++GKTLV RT GTKIAS+ LK RVFEVSL DL E E
Sbjct: 23 DPFTRKDWYDVKAPSLFTNRDIGKTLVNRTAGTKIASDSLKGRVFEVSLADLQGESEAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AE+VQG+ +LTNF GM FTTDKLRSLV+KW TLIE VDVKTTD++ LR+FC
Sbjct: 83 SFRKFRLIAEEVQGRYLLTNFHGMDFTTDKLRSLVKKWQTLIECSVDVKTTDSYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT++ ++TCYAQ +Q+R IR+KM EI+ + +S DLK V K I + I ++IEK
Sbjct: 143 IGFTQKDQRSQRKTCYAQHTQVRAIRKKMTEIITKEISSGDLKEAVSKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSED-VGVKVDRPA--DE 229
+ SIYP+ V+IRKVK+LK PKFD+GKL+++HG+ +ED GV + RP +
Sbjct: 203 SCHSIYPIHEVYIRKVKVLKKPKFDMGKLLDMHGEGAVTKRVTTEDGTGVVISRPEGYEP 262
Query: 230 PIPEA 234
PI E+
Sbjct: 263 PIQES 267
>gi|322695673|gb|EFY87477.1| 40S ribosomal protein S3 [Metarhizium acridum CQMa 102]
Length = 300
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 180/275 (65%), Gaps = 45/275 (16%)
Query: 2 DPFAKKDWYDIK----------------------APSCFRV------------------- 20
DPF++KDWY IK APS F
Sbjct: 22 DPFSRKDWYSIKVGSNLPQQFTGISLNLSFFRRPAPSAFESEFNILFSDPRKRAWVKTGL 81
Query: 21 ---RNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
+VGKTLV RT G K A++ LK R+ EVSL DL +EEH++RK+RLR ++VQGKN L
Sbjct: 82 TTKNSVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEEHSFRKVRLRVDEVQGKNCL 141
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF IGFTKR PNQ+K+T YA
Sbjct: 142 TNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIGFTKRRPNQIKKTTYAA 201
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
+SQIR IRRKM +I+ +A+SC L L K I EVIGREIEK+T IYPLQNV IRKVK+
Sbjct: 202 SSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKSTIGIYPLQNVHIRKVKL 261
Query: 198 LKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPI 231
LKAPKFDLG LM +HG+ ++D G KV+R E +
Sbjct: 262 LKAPKFDLGALMALHGESGTDDQGQKVEREFKERV 296
>gi|311334522|emb|CBN08642.1| small nucleolar RNA, C/D box 73A [Microcosmus squamiger]
Length = 269
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/247 (56%), Positives = 174/247 (70%), Gaps = 15/247 (6%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 23 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIEA D+ TTD + +RLFCIG
Sbjct: 82 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIEASADLSTTDGYKVRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + NQ+K+T YAQ QIR IRRKM EIM + ++ DL+ V K I + I ++IEKA
Sbjct: 142 FTHKRNNQIKKTSYAQHQQIRNIRRKMIEIMTREVSTSDLREFVNKLIPDSIAKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG-----------DYSEDVGVKVDRPAD-- 228
IYPL +V IRKVKILK PKFD+G+LME+HG D S D G KV R D
Sbjct: 202 QGIYPLHDVHIRKVKILKKPKFDIGRLMELHGEGKAAKSAAATDGSGDTGAKVSRVGDGF 261
Query: 229 -EPIPEA 234
P+ E+
Sbjct: 262 EPPVQES 268
>gi|71026281|ref|XP_762821.1| 40S ribosomal protein S3A [Theileria parva strain Muguga]
gi|122050561|sp|Q4MYZ4.1|RS3A_THEPA RecName: Full=40S ribosomal protein S3a
gi|68349773|gb|EAN30538.1| 40S ribosomal protein S3A, putative [Theileria parva]
Length = 262
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 170/217 (78%), Gaps = 1/217 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WY++KAP F VRN G+TLVT+T GTK+A++GLK RVFE+SL DL +E+ AY
Sbjct: 22 DPFSRKEWYNLKAPVTFNVRNFGQTLVTKTVGTKLATDGLKGRVFEMSLADLNADEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L EDVQG+N LT+F G S T DKL SL+RK ++LIEA+ DVKT D + LRLFC+G
Sbjct: 82 RKIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+TKR P Q+K TCY +TS++R I +KM +M +A++ LK LV+K I E IG+EIEKA
Sbjct: 142 YTKRRPGQLKSTCYVRTSKVRLIHKKMVSVMTNEASNSTLKELVKKVIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 218
SI+PLQNV +RK+K+LK PKFDL KLME H +YS D
Sbjct: 202 KSIFPLQNVLVRKIKVLKKPKFDLTKLMESH-NYSGD 237
>gi|255710089|gb|ACU30864.1| 40S ribosomal protein S3a [Ochlerotatus triseriatus]
Length = 268
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 174/247 (70%), Gaps = 14/247 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E
Sbjct: 21 DPFTRKDWYDVKAPNMFSTRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAER 80
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDV G+NVL NF GM TTDKLRS+V+KW TLIE VDVKTTD + LR+FC
Sbjct: 81 SFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFC 140
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI++IRRKM I+ S DLK V K + + I ++IEK
Sbjct: 141 IGFTIKDSVSQRKTCYAQHSQIKEIRRKMTTIITRDVTSSDLKEAVNKLLPDSIAKDIEK 200
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----------YSEDVGVKVDRPA-- 227
A IYPL +V+IRKVK+LK P+FDL L+E+HGD + + GV VDRP
Sbjct: 201 ACQGIYPLHDVYIRKVKVLKKPRFDLANLLELHGDGGGKGAEVSTGAAEGGVTVDRPEGY 260
Query: 228 DEPIPEA 234
+ P+ E+
Sbjct: 261 EPPVQES 267
>gi|170045145|ref|XP_001850180.1| 40S ribosomal protein S3a [Culex quinquefasciatus]
gi|167868153|gb|EDS31536.1| 40S ribosomal protein S3a [Culex quinquefasciatus]
Length = 376
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/247 (55%), Positives = 175/247 (70%), Gaps = 14/247 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E
Sbjct: 129 DPFTRKDWYDVKAPNMFSCRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAER 188
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDV G+NVL NF GM TTDKLRS+V+KW TLIE VDVKTTDN+ LR+FC
Sbjct: 189 SFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDNYLLRVFC 248
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI+ IR+ M +I+ S DLK +V K + + I ++IEK
Sbjct: 249 IGFTIKDQVSQRKTCYAQHSQIKAIRKNMTQIITNNVTSSDLKEVVNKLLPDSIAKDIEK 308
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----------YSEDVGVKVDRPA-- 227
A +YPL +V+IRKVK+LK P+FDL L+E+HGD + + GV VDRP
Sbjct: 309 ACQGVYPLHDVYIRKVKVLKKPRFDLANLLELHGDGGGKGAEVSTGAAEGGVVVDRPEGY 368
Query: 228 DEPIPEA 234
+ P+ E+
Sbjct: 369 EPPVQES 375
>gi|149048221|gb|EDM00797.1| rCG62728, isoform CRA_b [Rattus norvegicus]
Length = 241
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/231 (59%), Positives = 175/231 (75%), Gaps = 10/231 (4%)
Query: 13 KAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQ 72
KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQ
Sbjct: 11 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQ 69
Query: 73 GKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 132
GKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++
Sbjct: 70 GKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRK 129
Query: 133 TCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFI 192
T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+
Sbjct: 130 TSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFV 189
Query: 193 RKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIPEA 234
RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+ E+
Sbjct: 190 RKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYEPPVQES 240
>gi|269969635|sp|B0WN96.2|RS3A_CULQU RecName: Full=40S ribosomal protein S3a
Length = 270
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/247 (55%), Positives = 175/247 (70%), Gaps = 14/247 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPNMFSCRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDV G+NVL NF GM TTDKLRS+V+KW TLIE VDVKTTDN+ LR+FC
Sbjct: 83 SFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDNYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI+ IR+ M +I+ S DLK +V K + + I ++IEK
Sbjct: 143 IGFTIKDQVSQRKTCYAQHSQIKAIRKNMTQIITNNVTSSDLKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----------YSEDVGVKVDRPA-- 227
A +YPL +V+IRKVK+LK P+FDL L+E+HGD + + GV VDRP
Sbjct: 203 ACQGVYPLHDVYIRKVKVLKKPRFDLANLLELHGDGGGKGAEVSTGAAEGGVVVDRPEGY 262
Query: 228 DEPIPEA 234
+ P+ E+
Sbjct: 263 EPPVQES 269
>gi|389583373|dbj|GAB66108.1| 40S ribosomal protein S3a [Plasmodium cynomolgi strain B]
Length = 262
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/243 (55%), Positives = 177/243 (72%), Gaps = 7/243 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+WYD+KAP F VRN GKTLVT+T G K+A++GLK R++EV+L DL N+E+ A
Sbjct: 21 TDVFTKKEWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KI+L + + ++ T+F G+S T DKL SL+RK +TLIE Y DVKT DN+ LR+FCI
Sbjct: 81 HKKIKLCCDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGYTDVKTIDNYHLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK
Sbjct: 141 AFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMNAEASKVLLKDLVKKFIPESIGKEVEKQ 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA--PTEV 238
IYPLQNV IRKVKILK PK D+ KLME+H D ED G V + +PE+ T +
Sbjct: 201 CKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV-----KSLPESKEATNI 255
Query: 239 IGA 241
+ A
Sbjct: 256 LSA 258
>gi|406604327|emb|CCH44229.1| hypothetical protein BN7_3788 [Wickerhamomyces ciferrii]
Length = 258
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 167/222 (75%), Gaps = 1/222 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDW+DIKAPS F RNVGKTLV ++ G K A++ LK RV E+SL DL E++A+
Sbjct: 22 DPFSRKDWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEISLADLQGSEDYAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R ++LR ++VQGKN+LTNF GM FT+DKLRS+VRKW TLIE V KT+D++ +R+F I
Sbjct: 82 RNVKLRVDEVQGKNLLTNFHGMDFTSDKLRSMVRKWQTLIETAVTAKTSDDYVIRVFGIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ+S IRQIR+ EI+ + + L L +K I EVIGREIEK
Sbjct: 142 FTKRQANQIKKTTYAQSSHIRQIRKITSEIIAKEVQNSTLAELTQKLIPEVIGREIEKQA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVK 222
S++PLQNV IRKVKILK PKFDLG L+ +HG+ SED G K
Sbjct: 202 KSVFPLQNVHIRKVKILKQPKFDLGSLLALHGEATSEDKGKK 243
>gi|159145752|gb|ABW90413.1| putative ribosomal protein S3a [Barentsia elongata]
Length = 267
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/241 (56%), Positives = 174/241 (72%), Gaps = 11/241 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F R +GKTLVTRT GTKIAS+GLK RV+EVSLGDL N+E A+
Sbjct: 23 DPFTKKDWYDVKAPSMFNQRQMGKTLVTRTIGTKIASDGLKGRVYEVSLGDLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T+DK +++V+KW TLIEA+ DV TTD + LR F +G
Sbjct: 82 RKFKLICEDVQGKNCLTNFHGMGLTSDKQKAVVKKWQTLIEAHTDVTTTDGYKLRFFVMG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ QVK+TCYAQ QIR IR++M +I+ + +S +LK +V K I + IG++IEKA+
Sbjct: 142 FTKKQQGQVKKTCYAQAQQIRNIRKRMVQIIQREVSSTELKEVVNKLIPDSIGKDIEKAS 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH----------GDYSEDVGVKVDRPADEPI 231
S I+PL V++RKVK++K PKFDLG+L+E+H + G KV RP +
Sbjct: 202 SGIFPLHEVYVRKVKVMKKPKFDLGRLLEMHGEGGSAGKGGAPSGDGEGAKVSRPDNYEP 261
Query: 232 P 232
P
Sbjct: 262 P 262
>gi|50293939|ref|XP_449381.1| 40S ribosomal protein S1 [Candida glabrata CBS 138]
gi|74661052|sp|Q6FK63.1|RS3A_CANGA RecName: Full=40S ribosomal protein S1
gi|49528695|emb|CAG62357.1| unnamed protein product [Candida glabrata]
Length = 255
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWYDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +DVQGKN+LTNF GM FT DKLRS+VRKW TLIEA V VKT+D + +R+F I
Sbjct: 82 RKVKLRVDDVQGKNLLTNFHGMDFTADKLRSMVRKWQTLIEANVTVKTSDEYIIRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRT YAQ+S IR IR+ + +I+ + ++ L K I EVI +EIE AT
Sbjct: 142 FTRKQSNQVKRTAYAQSSHIRAIRKVISDILTREVSNSTLAQFTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSAEEKGKKVSGFKDE 250
>gi|363748012|ref|XP_003644224.1| hypothetical protein Ecym_1156 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887856|gb|AET37407.1| hypothetical protein Ecym_1156 [Eremothecium cymbalariae
DBVPG#7215]
Length = 255
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/229 (58%), Positives = 169/229 (73%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWYDIKAPSTFENRNVGKTLVNKSTGLKNAADFLKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+SFTTDKLRS+VRKW TLIEA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGLSFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQ+K+T YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGEASGEEKGKKVGGFKDE 250
>gi|157111500|ref|XP_001651594.1| 40S ribosomal protein S3a [Aedes aegypti]
gi|157134679|ref|XP_001663344.1| 40S ribosomal protein S3a [Aedes aegypti]
gi|121959415|sp|Q1HRR3.1|RS3A_AEDAE RecName: Full=40S ribosomal protein S3a
gi|94468430|gb|ABF18064.1| 40S ribosomal protein S3A [Aedes aegypti]
gi|108870389|gb|EAT34614.1| AAEL013158-PA [Aedes aegypti]
gi|108878363|gb|EAT42588.1| AAEL005901-PB [Aedes aegypti]
Length = 270
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/247 (55%), Positives = 175/247 (70%), Gaps = 14/247 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPNMFSNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDV G+NVL NF GM TTDKLRS+V+KW TLIE VDVKTTD + LR+FC
Sbjct: 83 SFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI++IRRKM I+ S DLK +V K + + I ++IEK
Sbjct: 143 IGFTIKDSVSQRKTCYAQHSQIKEIRRKMTTIITRDVTSSDLKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----------YSEDVGVKVDRPA-- 227
+ IYPL +V+IRKVK+LK P+FDL L+E+HGD + + GV +DRP
Sbjct: 203 SCQGIYPLHDVYIRKVKVLKKPRFDLANLLELHGDGGGKGAEVSTGAAEGGVTIDRPEGY 262
Query: 228 DEPIPEA 234
+ P+ E+
Sbjct: 263 EPPVQES 269
>gi|403295782|ref|XP_003938805.1| PREDICTED: 40S ribosomal protein S3a-like [Saimiri boliviensis
boliviensis]
Length = 251
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 169/215 (78%), Gaps = 1/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F V+N+GKTLVTRTQGTKIAS+GLK RV EVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNVKNIGKTLVTRTQGTKIASDGLKGRVSEVSLFDLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+K +L +DVQGKN L NF GM T D+L S+V+KW T+IEA+VDVKTT+ + LRLFC+G
Sbjct: 82 KKFKLITQDVQGKNCLINFHGMDLTRDRLCSMVKKWQTMIEAHVDVKTTNGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+ +T YAQ Q+RQI +KM EIM + + DLK +V I + I ++IEKA
Sbjct: 142 FTKKCNNQLGKTSYAQHQQVRQIWKKMVEIMTLEVQTNDLKEVVNILIPDSIRKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGS 236
>gi|156841166|ref|XP_001643958.1| hypothetical protein Kpol_1001p12 [Vanderwaltozyma polyspora DSM
70294]
gi|269969618|sp|A7TNP9.1|RS3A_VANPO RecName: Full=40S ribosomal protein S1
gi|156114589|gb|EDO16100.1| hypothetical protein Kpol_1001p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 255
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/229 (58%), Positives = 168/229 (73%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDK+RS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRT YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT
Sbjct: 142 FTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSGEEKGKKVSGFKDE 250
>gi|70909477|emb|CAJ17219.1| ribosomal protein S3Ae [Timarcha balearica]
Length = 268
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 162/213 (76%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAPS F R VGKTLV RTQGTKIASEGLK+RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTTRQVGKTLVNRTQGTKIASEGLKYRVFEVSLADLQNDNDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA DVKT+D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEASADVKTSDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ DLK +V K + + I ++IEK
Sbjct: 143 IGFTNKDQLSQRKTCYAQHTQVRAIRKKMVEIITGDIQGSDLKEVVNKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
IYPL +V+IRKVK+LK P+F+L KL+E+H
Sbjct: 203 KCQGIYPLHDVYIRKVKVLKKPRFELSKLLELH 235
>gi|365759245|gb|EHN01046.1| Rps1ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401839011|gb|EJT42392.1| RPS1A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 287
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 168/231 (72%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 54 DPFTRKDWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 113
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 114 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 173
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT
Sbjct: 174 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENAT 233
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPI 231
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE +
Sbjct: 234 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDEVL 284
>gi|403222781|dbj|BAM40912.1| 40S ribosomal protein S3a [Theileria orientalis strain Shintoku]
Length = 262
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 169/217 (77%), Gaps = 1/217 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY++KAP F VRN G+TLVT+T GTK+A++GLK RVFE+SL DL +E+ AY
Sbjct: 22 DPFTKKEWYNLKAPVVFNVRNFGQTLVTKTIGTKLATDGLKGRVFEMSLADLNADEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L EDVQG+N LT+F G S T DKL SL+RK +TLIEA+ DVKT D + LR+FC+G
Sbjct: 82 RKIKLSCEDVQGRNCLTDFHGSSVTRDKLCSLIRKNYTLIEAFADVKTLDGYHLRMFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+TKR P Q+K TCY ++S++R I +KM +M +A++ L+ LV+K I E IG+EIEKA
Sbjct: 142 YTKRRPGQLKSTCYVRSSKVRMIHKKMVSVMTNEASNSTLRELVKKVIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 218
S++PLQNV +RK+K+LK PKFDL KLME H +YS D
Sbjct: 202 KSVFPLQNVLVRKIKVLKKPKFDLTKLMEAH-NYSPD 237
>gi|410080245|ref|XP_003957703.1| hypothetical protein KAFR_0E04170 [Kazachstania africana CBS 2517]
gi|372464289|emb|CCF58568.1| hypothetical protein KAFR_0E04170 [Kazachstania africana CBS 2517]
Length = 255
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 170/231 (73%), Gaps = 1/231 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRT YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRTAYAQSSHIRVIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPI 231
I+PLQNV IRKVK+LK PKFDLG L+ +HG+ SE+ G KV DE +
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSSEEKGKKVSGFKDEVL 252
>gi|317135007|gb|ADV03066.1| ribosomal protein S3a [Amphidinium carterae]
Length = 271
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 170/231 (73%), Gaps = 2/231 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WYDIKAPS F R GKTLV+RT GT+IA+E LK RV +++L D+ +E+ A
Sbjct: 22 GDPFLKKEWYDIKAPSMFNQRQCGKTLVSRTAGTRIATEELKGRVLQLNLADMNQDEDQA 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
Y+KI+L E+VQG++ LT+F+G+ T DKL SL+RKWH L+EA VDVKTTD +T+R+F I
Sbjct: 82 YKKIKLCVEEVQGRSCLTDFYGLDLTRDKLCSLIRKWHNLVEANVDVKTTDGYTVRMFAI 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTKR P QV+ YAQ++Q+R+IR+KM EIM +A C L+ LV+K I E IG+EIEK
Sbjct: 142 AFTKRRPEQVRNNTYAQSAQLRKIRKKMVEIMTNEAGKCQLRDLVKKLIPESIGKEIEKQ 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV--GVKVDRPADE 229
T I+PL++ IRKVK+LK PKFD+ K ME+H D DV G RP ++
Sbjct: 202 TQGIFPLKDALIRKVKVLKKPKFDITKFMELHADTGGDVDEGAAFGRPEND 252
>gi|418210366|gb|AFX63821.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210368|gb|AFX63822.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210418|gb|AFX63847.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210420|gb|AFX63848.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210434|gb|AFX63855.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210436|gb|AFX63856.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 235
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 14 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIG
Sbjct: 73 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 133 FTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKAC 192
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 193 QGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 225
>gi|418210338|gb|AFX63807.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210340|gb|AFX63808.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210342|gb|AFX63809.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210344|gb|AFX63810.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210350|gb|AFX63813.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210352|gb|AFX63814.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210354|gb|AFX63815.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210356|gb|AFX63816.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210362|gb|AFX63819.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210364|gb|AFX63820.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210370|gb|AFX63823.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210372|gb|AFX63824.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210378|gb|AFX63827.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210380|gb|AFX63828.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210402|gb|AFX63839.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210404|gb|AFX63840.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210414|gb|AFX63845.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210416|gb|AFX63846.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210422|gb|AFX63849.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210424|gb|AFX63850.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210426|gb|AFX63851.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210428|gb|AFX63852.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210430|gb|AFX63853.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210432|gb|AFX63854.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210438|gb|AFX63857.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210440|gb|AFX63858.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 238
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 17 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 75
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIG
Sbjct: 76 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIG 135
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 136 FTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKAC 195
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 196 QGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 228
>gi|418210382|gb|AFX63829.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210384|gb|AFX63830.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210442|gb|AFX63859.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210444|gb|AFX63860.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 234
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 13 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 71
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIG
Sbjct: 72 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIG 131
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 132 FTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKAC 191
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 192 QGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 224
>gi|418210332|gb|AFX63804.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210334|gb|AFX63805.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 237
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 17 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 75
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIG
Sbjct: 76 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIG 135
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 136 FTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKAC 195
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 196 QGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 228
>gi|85001345|ref|XP_955391.1| 40s ribosomal protein s3a [Theileria annulata strain Ankara]
gi|74951308|sp|Q4UB86.1|RS3A_THEAN RecName: Full=40S ribosomal protein S3a
gi|65303537|emb|CAI75915.1| 40s ribosomal protein s3a, putative [Theileria annulata]
Length = 262
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 169/219 (77%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WY++KAP F VRN G+TLVT+T GTK+A++GLK RVFE+SL DL +E+ AY
Sbjct: 22 DPFSRKEWYNLKAPVTFNVRNFGQTLVTKTIGTKLATDGLKGRVFEMSLADLNADEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L EDVQG+N LT+F G S T DKL SL+RK ++LIEA+ DVKT D + LR+FC+G
Sbjct: 82 RKIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRMFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+TKR P Q+K TCY ++S++R I +KM +M +A++ LK LV+K I E IG+EIEKA
Sbjct: 142 YTKRRPGQLKSTCYVRSSKVRLIHKKMVAVMTNEASNSTLKELVKKVIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 220
SI+PLQNV +RK+K+LK PKFDL KLME H E+ G
Sbjct: 202 KSIFPLQNVLVRKIKVLKKPKFDLTKLMESHNYSGEEEG 240
>gi|418210358|gb|AFX63817.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210360|gb|AFX63818.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210390|gb|AFX63833.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210392|gb|AFX63834.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 236
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 15 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 73
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIG
Sbjct: 74 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIG 133
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 134 FTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKAC 193
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 194 QGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 226
>gi|410082756|ref|XP_003958956.1| hypothetical protein KAFR_0I00400 [Kazachstania africana CBS 2517]
gi|372465546|emb|CCF59821.1| hypothetical protein KAFR_0I00400 [Kazachstania africana CBS 2517]
Length = 255
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 169/229 (73%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRT YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRTAYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSGEEKGKKVAGFKDE 250
>gi|418210394|gb|AFX63835.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210396|gb|AFX63836.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 235
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 17 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 75
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIG
Sbjct: 76 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIG 135
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 136 FTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKAC 195
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 196 QGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 228
>gi|418210336|gb|AFX63806.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 238
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E Y
Sbjct: 18 DPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTY 76
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIG
Sbjct: 77 RKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIG 136
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 137 FTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKAC 196
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 197 QGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 229
>gi|418210398|gb|AFX63837.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210400|gb|AFX63838.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210406|gb|AFX63841.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210408|gb|AFX63842.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 228
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 164/214 (76%), Gaps = 1/214 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E
Sbjct: 11 VDPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDEST 69
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCI
Sbjct: 70 YRKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCI 129
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 130 GFTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKA 189
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 190 CQGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 223
>gi|418210346|gb|AFX63811.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210348|gb|AFX63812.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210410|gb|AFX63843.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210412|gb|AFX63844.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 229
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 164/214 (76%), Gaps = 1/214 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E
Sbjct: 12 VDPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDEST 70
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCI
Sbjct: 71 YRKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCI 130
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 131 GFTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKA 190
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 191 CQGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 224
>gi|255714262|ref|XP_002553413.1| 40S ribosomal protein S1 [Lachancea thermotolerans]
gi|269969582|sp|C5DFM0.1|RS3A_LACTC RecName: Full=40S ribosomal protein S1
gi|238934793|emb|CAR22975.1| KLTH0D16214p [Lachancea thermotolerans CBS 6340]
Length = 256
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/223 (59%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFSRKEWYDIKAPSTFENRNVGKTLVNKSTGLKNASDYLKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ TTDK RS+VRKW TLIEA V VKT D + LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGLDLTTDKYRSMVRKWQTLIEANVTVKTADEYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R PNQVK+ CYAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRRQPNQVKKACYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGEASGEEKGKKV 244
>gi|418210386|gb|AFX63831.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210388|gb|AFX63832.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 224
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 164/214 (76%), Gaps = 1/214 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E
Sbjct: 11 VDPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDEST 69
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRK+RL E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCI
Sbjct: 70 YRKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCI 129
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA
Sbjct: 130 GFTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKA 189
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IYPL +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 190 CQGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGE 223
>gi|444320765|ref|XP_004181039.1| hypothetical protein TBLA_0E04680 [Tetrapisispora blattae CBS 6284]
gi|387514082|emb|CCH61520.1| hypothetical protein TBLA_0E04680 [Tetrapisispora blattae CBS 6284]
Length = 255
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDW+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E++++
Sbjct: 22 DPFTRKDWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDYSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKRT YAQ+S IR IR+ + +I+ + L L K I EVI +EIE AT
Sbjct: 142 FTRKQSNQVKRTAYAQSSHIRAIRKVISDILTKEVQGSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGALMALHGEASGEEKGKKVSGFKDE 250
>gi|289742521|gb|ADD20008.1| 40S ribosomal protein S3A [Glossina morsitans morsitans]
Length = 268
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/245 (55%), Positives = 176/245 (71%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEV+LGDL N+ E
Sbjct: 23 DPFSRKDWYDVKAPNMFKTRQIGKTLVNRTQGQRIASDFLKGRVFEVALGDLQKDNDSER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVLTNF GM TTDK R +V+KW TLIE V+ KTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLTNFHGMDLTTDKYRCMVKKWQTLIEGIVEAKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR KM EI++ + + CDLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQHSQVRKIRSKMHEIIIREVSDCDLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKVDRPA--DE 229
IYPL +V+IRKVK+LK P+FDL KL+E+HGD +E V G +DRP +
Sbjct: 203 ICQRIYPLHDVYIRKVKVLKKPRFDLSKLLELHGDGGGKGTEAVVSAEGTVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ E+
Sbjct: 263 PVQES 267
>gi|308487814|ref|XP_003106102.1| CRE-RPS-1 protein [Caenorhabditis remanei]
gi|308254676|gb|EFO98628.1| CRE-RPS-1 protein [Caenorhabditis remanei]
Length = 272
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/249 (58%), Positives = 176/249 (70%), Gaps = 20/249 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +
Sbjct: 21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADF 79
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQGKNVLTNF MS T DKL S+V+KWHTLIEA VKTTD +TLR+F I
Sbjct: 80 RKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIA 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKM-----REIM----------VAQAASCDLKSLVE 166
FTK+ NQVK+T Y +TS+IR+IR +M +E+ Q CDLK +V
Sbjct: 140 FTKKSANQVKKTSYTKTSKIRKIRSEMISCIEKEVCYIFLLCVHQYCFQVTGCDLKEVVS 199
Query: 167 KFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KV 223
K I + IG++IEK S +YPLQ V+IRKVKI+K PK DLG+L ++HG+ S VG KV
Sbjct: 200 KLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKIDLGRLHDLHGE-SMTVGADGEKV 258
Query: 224 DRPADEPIP 232
DRP D P
Sbjct: 259 DRPDDYEPP 267
>gi|349580134|dbj|GAA25295.1| K7_Rps1ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 255
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/229 (58%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
>gi|6323474|ref|NP_013546.1| ribosomal 40S subunit protein S1A [Saccharomyces cerevisiae S288c]
gi|464718|sp|P33442.2|RS3A1_YEAST RecName: Full=40S ribosomal protein S1-A; AltName: Full=RP10A
gi|269969540|sp|B3RHV0.1|RS3A1_YEAS1 RecName: Full=40S ribosomal protein S1-A
gi|269969541|sp|C7GSL4.1|RS3A1_YEAS2 RecName: Full=40S ribosomal protein S1-A
gi|269969542|sp|B5VNY0.1|RS3A1_YEAS6 RecName: Full=40S ribosomal protein S1-A
gi|269969543|sp|A7A1W1.1|RS3A1_YEAS7 RecName: Full=40S ribosomal protein S1-A
gi|364506097|pdb|3U5C|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506135|pdb|3U5G|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|396208|emb|CAA46676.1| PLC1 [Saccharomyces cerevisiae]
gi|471337|emb|CAA48559.1| KRP-Y1 [Saccharomyces cerevisiae]
gi|665976|gb|AAB67521.1| Rp10ap: 40S ribosomal protein 10A [Saccharomyces cerevisiae]
gi|51013747|gb|AAT93167.1| YLR441C [Saccharomyces cerevisiae]
gi|151940957|gb|EDN59339.1| ribosomal protein S1A [Saccharomyces cerevisiae YJM789]
gi|190405477|gb|EDV08744.1| ribosomal protein S1B [Saccharomyces cerevisiae RM11-1a]
gi|207342666|gb|EDZ70364.1| YLR441Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271106|gb|EEU06201.1| Rps1ap [Saccharomyces cerevisiae JAY291]
gi|285813846|tpg|DAA09742.1| TPA: ribosomal 40S subunit protein S1A [Saccharomyces cerevisiae
S288c]
gi|323303755|gb|EGA57541.1| Rps1ap [Saccharomyces cerevisiae FostersB]
gi|323307920|gb|EGA61180.1| Rps1ap [Saccharomyces cerevisiae FostersO]
gi|323332452|gb|EGA73861.1| Rps1ap [Saccharomyces cerevisiae AWRI796]
gi|323353751|gb|EGA85607.1| Rps1ap [Saccharomyces cerevisiae VL3]
gi|392297943|gb|EIW09042.1| Rps1ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 255
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/229 (58%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
>gi|156087753|ref|XP_001611283.1| 40S ribosomal protein S3Ae [Babesia bovis T2Bo]
gi|269969563|sp|A7AMD1.1|RS3A_BABBO RecName: Full=40S ribosomal protein S3a
gi|154798537|gb|EDO07715.1| 40S ribosomal protein S3Ae, putative [Babesia bovis]
Length = 264
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/219 (59%), Positives = 174/219 (79%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY +KAP F VRN G+TLV++TQGTK+A++GL+ R++EVSL DL +E+ +Y
Sbjct: 22 DPFLKKEWYTLKAPVMFHVRNFGQTLVSKTQGTKLATDGLRGRIYEVSLADLNADEDQSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L ED+QG+N LTNF G S T DKL SL+RK ++LIEA+ DVKTTD +TLR+FCIG
Sbjct: 82 RKIKLCCEDIQGRNCLTNFHGTSVTRDKLCSLIRKNYSLIEAFTDVKTTDGYTLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+TKR P Q+K TCY ++S+ R +RRKM E+M +A++ ++ +V+K I E IG+EIEKA
Sbjct: 142 YTKRRPGQLKSTCYIRSSRTRVVRRKMIEVMQREASTTSMREVVKKIIPESIGKEIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 220
S++PLQNV IRK+K+LK PKFDL KLMEVH D SE+ G
Sbjct: 202 KSVFPLQNVLIRKIKVLKKPKFDLTKLMEVHTDISEETG 240
>gi|1359478|emb|CAA66861.1| put. S3a ribosomal protein homologue [Anopheles gambiae]
Length = 269
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAP+ F+ R GKTLV RTQGTKIAS+GLK RVFEVSL DL NE E
Sbjct: 23 DPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AE V G++VLTNF GM+ TTDKLRS+V KW TLIE VDVKTTD F LR+FC
Sbjct: 83 SFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI+ IR KM I+ + S DLK +VEK + + I ++IEK
Sbjct: 143 IGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
A +YPL +V+IRKVK+LK P+FDL LME+HGD
Sbjct: 203 ACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237
>gi|242050790|ref|XP_002463139.1| hypothetical protein SORBIDRAFT_02g038380 [Sorghum bicolor]
gi|241926516|gb|EER99660.1| hypothetical protein SORBIDRAFT_02g038380 [Sorghum bicolor]
Length = 218
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/241 (58%), Positives = 164/241 (68%), Gaps = 46/241 (19%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKHRVFE SL DL ++E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEASLADLQSDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGMSFTTDKLRSLV+KW TL EA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLTEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQVKRTCYAQ SQIRQ +R++ + +A D+ L
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQ-NVFIRKVKILKAPKFDIGKL----------------- 183
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIG 240
MEVHGDY+ +DVGV ++RPA+ + EV
Sbjct: 184 ---------------------------MEVHGDYAKDDVGVHIERPAEGDLAMGGQEVAA 216
Query: 241 A 241
+
Sbjct: 217 S 217
>gi|365764222|gb|EHN05747.1| Rps1ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 255
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/229 (58%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT
Sbjct: 142 FTRKHANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
>gi|291237878|ref|XP_002738859.1| PREDICTED: ribosomal protein S3a-like [Saccoglossus kowalevskii]
Length = 267
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/241 (59%), Positives = 181/241 (75%), Gaps = 11/241 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAPS F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPSMFNIRNIGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL E+VQGKN LTNF GM+ T DKL S+V+KW TLIEA +DVKT+D + LRLFCIG
Sbjct: 82 RKFRLMVEEVQGKNCLTNFHGMNLTRDKLCSMVKKWQTLIEANIDVKTSDGYLLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YA +Q++ IRRKM EIMV + + +LK +V K I + IG++IEKA
Sbjct: 142 FTKRRQNQIKKTTYAYHTQVKSIRRKMVEIMVRECQNVELKEIVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----------EDVGVKVDRPADEPI 231
I+PL +V IRKVK+LK PK D+GKL+E+HG+ S ++ G KV RP +
Sbjct: 202 QGIFPLHDVHIRKVKVLKKPKLDVGKLLELHGEGSASKGGGGETTDESGEKVSRPDNYEP 261
Query: 232 P 232
P
Sbjct: 262 P 262
>gi|259148418|emb|CAY81665.1| Rps1ap [Saccharomyces cerevisiae EC1118]
Length = 255
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EV+ +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVVNKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
>gi|196012417|ref|XP_002116071.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|269969615|sp|B3S6Y0.1|RS3A_TRIAD RecName: Full=40S ribosomal protein S3a
gi|190581394|gb|EDV21471.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 258
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/232 (61%), Positives = 177/232 (76%), Gaps = 4/232 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F VRN+GKTLV RT GTKIAS+GLK RVFEVSL DL N E A+
Sbjct: 22 DPFTKKDWYDVKAPSQFAVRNIGKTLVNRTSGTKIASDGLKGRVFEVSLADLQNGE-IAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+V GK+VLTNF GMS T+DKL+SLV+KW TLIEA++D KTTD + LR F IG
Sbjct: 81 RKFRLIAEEVLGKSVLTNFHGMSMTSDKLKSLVKKWQTLIEAHIDAKTTDGYLLRFFAIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ PNQ+K+T YA+TSQ R IR+KM +I+ + ++ DLK +V + I + IG++IEK+
Sbjct: 141 FTKKRPNQIKKTAYAKTSQCRSIRKKMTDIITREVSAIDLKEVVNRLIPDSIGKDIEKSC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEP 230
SIYPL +V+IRKVK+LK PK D KL+E+HG+ S D G V R EP
Sbjct: 201 QSIYPLHDVYIRKVKVLKKPKLDTAKLLELHGEGVASSGDAGSAVRRDGYEP 252
>gi|45190736|ref|NP_984990.1| 40S ribosomal protein S1 [Ashbya gossypii ATCC 10895]
gi|74693534|sp|Q756Y3.1|RS3A_ASHGO RecName: Full=40S ribosomal protein S1
gi|44983715|gb|AAS52814.1| AER131Cp [Ashbya gossypii ATCC 10895]
gi|374108213|gb|AEY97120.1| FAER131Cp [Ashbya gossypii FDAG1]
Length = 256
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/223 (59%), Positives = 166/223 (74%), Gaps = 1/223 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+WYDIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWYDIKAPSTFENRNVGKTLVNKSTGLKNAADFLKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FTTDKLRS+VRKW TLIEA V VKT D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGLDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R NQ+K+T YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 223
I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGESSGEEKGKKV 244
>gi|6323577|ref|NP_013648.1| ribosomal 40S subunit protein S1B [Saccharomyces cerevisiae S288c]
gi|127059|sp|P23248.3|RS3A2_YEAST RecName: Full=40S ribosomal protein S1-B; AltName: Full=RP10B
gi|269969548|sp|B3LLJ2.1|RS3A2_YEAS1 RecName: Full=40S ribosomal protein S1-B
gi|269969550|sp|B5VP69.1|RS3A2_YEAS6 RecName: Full=40S ribosomal protein S1-B
gi|269969551|sp|A6ZM02.1|RS3A2_YEAS7 RecName: Full=40S ribosomal protein S1-B
gi|3953|emb|CAA39044.1| mitochondrial fusion targeting mutant MFT1 protein [Saccharomyces
cerevisiae]
gi|558412|emb|CAA86258.1| ribosomal protein RS3B [Saccharomyces cerevisiae]
gi|45272599|gb|AAS56307.1| YML063W [Saccharomyces cerevisiae]
gi|151946101|gb|EDN64332.1| ribosomal protein S1B [Saccharomyces cerevisiae YJM789]
gi|190408180|gb|EDV11445.1| ribosomal protein S1A [Saccharomyces cerevisiae RM11-1a]
gi|207342545|gb|EDZ70281.1| YML063Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148513|emb|CAY81758.1| Rps1bp [Saccharomyces cerevisiae EC1118]
gi|285813939|tpg|DAA09834.1| TPA: ribosomal 40S subunit protein S1B [Saccharomyces cerevisiae
S288c]
gi|323303641|gb|EGA57429.1| Rps1bp [Saccharomyces cerevisiae FostersB]
gi|323332258|gb|EGA73668.1| Rps1bp [Saccharomyces cerevisiae AWRI796]
gi|323336177|gb|EGA77448.1| Rps1bp [Saccharomyces cerevisiae Vin13]
gi|323347073|gb|EGA81348.1| Rps1bp [Saccharomyces cerevisiae Lalvin QA23]
gi|323352963|gb|EGA85263.1| Rps1bp [Saccharomyces cerevisiae VL3]
gi|349580225|dbj|GAA25385.1| K7_Rps1bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763690|gb|EHN05216.1| Rps1bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297520|gb|EIW08620.1| Rps1bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 255
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 168/229 (73%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
>gi|406602700|emb|CCH45748.1| hypothetical protein BN7_5334 [Wickerhamomyces ciferrii]
Length = 256
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 166/222 (74%), Gaps = 1/222 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDW+DIKAPS F RNVGKTLV ++ G K A++ LK RV E+SL DL E++A+
Sbjct: 22 DPFSRKDWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEISLADLQGSEDYAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R ++LR ++VQGKN+LTNF GM FT+DKLRS+VRKW TLIE V KT D++ +R+F I
Sbjct: 82 RNVKLRVDEVQGKNLLTNFHGMDFTSDKLRSMVRKWQTLIETAVTAKTADDYVIRVFGIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQ+K+T YAQ+S IR IR+ +I+ + + L L +K I EVIGREIEK+T
Sbjct: 142 FTKRQSNQIKKTTYAQSSHIRAIRKVTSDIIAREVQNSTLAQLTQKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVK 222
I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S ED G K
Sbjct: 202 KGIFPLQNVHIRKVKLLKQPKFDLGALLSLHGEASPEDKGKK 243
>gi|401624583|gb|EJS42639.1| rps1ap [Saccharomyces arboricola H-6]
Length = 255
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/229 (56%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV E+ L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEICLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S +R IR+ + EI+ + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHVRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVGGFKDE 250
>gi|365759135|gb|EHN00942.1| Rps1bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 255
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIE V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEXNVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
>gi|269969557|sp|B6DDU1.1|RS3A_ANODA RecName: Full=40S ribosomal protein S3a
gi|208657565|gb|ACI30079.1| 40S ribosomal protein S3A [Anopheles darlingi]
gi|312381428|gb|EFR27181.1| hypothetical protein AND_06270 [Anopheles darlingi]
Length = 269
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/246 (55%), Positives = 175/246 (71%), Gaps = 13/246 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EH 59
DPF +KDWYD+KAP+ F+ R VGKTLV RTQGT+IAS+GLK RVFEVSL DL NE+ E
Sbjct: 23 DPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNEQDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AE V G++VL NF GM TTDKLRS+V+KW TLIE VDVKTTD + LR+FC
Sbjct: 83 SFRKFKLIAESVNGRDVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQI+ IR++M I+ + + DLK +VEK + + I ++IEK
Sbjct: 143 IGFTIKDSVSQRKTCYAQHSQIKNIRQRMTTIIKREIINSDLKGVVEKLLPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV---------GVKVDRPA--D 228
A +YPL +VFIRKVK+LK P+FDL L+E+HGD GV VDRP +
Sbjct: 203 ACQVVYPLHDVFIRKVKVLKKPRFDLSSLLELHGDGGGKAAEVSTGAASGVVVDRPEGYE 262
Query: 229 EPIPEA 234
P+ E+
Sbjct: 263 PPVQES 268
>gi|401624466|gb|EJS42523.1| rps1bp [Saccharomyces arboricola H-6]
Length = 255
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/229 (56%), Positives = 168/229 (73%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV E+ L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEICLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW +LIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQSLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQSNQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
>gi|269969549|sp|C7GVZ9.1|RS3A2_YEAS2 RecName: Full=40S ribosomal protein S1-B
gi|256269738|gb|EEU05005.1| Rps1bp [Saccharomyces cerevisiae JAY291]
Length = 255
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 168/229 (73%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S ++ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGKEKGKKVSGFKDE 250
>gi|251831260|gb|ACT21541.1| s3a protein [Actias selene]
Length = 264
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 175/241 (72%), Gaps = 8/241 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL ++ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TLIEA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ S +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----DVGVKVDRPA--DEPIPE 233
A IYPL++V IRKVK+LK P+F++ KLME+HG+ +VG K +RP + P+ E
Sbjct: 203 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEVGDKSERPEGYEPPVQE 262
Query: 234 A 234
+
Sbjct: 263 S 263
>gi|348019693|gb|AEP43788.1| 40S ribosomal protein S3a [Biston betularia]
Length = 263
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/240 (57%), Positives = 175/240 (72%), Gaps = 7/240 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQNDTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TLIEA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ S +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIIGRDVTSSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS---EDVGVKVDRPA--DEPIPEA 234
A IYPL++V IRKVK+LK P+F++ KLME+HG+ ++G K +RP + P+ E+
Sbjct: 203 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGKRGELGDKAERPEGYEPPVQES 262
>gi|297718727|gb|ADI50268.1| S3a protein [Antheraea pernyi]
Length = 264
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 175/241 (72%), Gaps = 8/241 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL ++ E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TLIEA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ S +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----DVGVKVDRPA--DEPIPE 233
A IYPL++V IRKVK+LK P+F++ KLME+HG+ +VG K +RP + P+ E
Sbjct: 203 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEVGDKSERPEGYEPPVQE 262
Query: 234 A 234
+
Sbjct: 263 S 263
>gi|149243736|ref|XP_001526516.1| 40S ribosomal protein S3aE [Lodderomyces elongisporus NRRL YB-4239]
gi|269969584|sp|A5DVF8.1|RS3A_LODEL RecName: Full=40S ribosomal protein S1
gi|146448910|gb|EDK43166.1| 40S ribosomal protein S3aE [Lodderomyces elongisporus NRRL YB-4239]
Length = 242
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 171/222 (77%), Gaps = 1/222 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
+PF +K +YDI+APS F VGKTLV ++ GT +++ LK RVFEV+LGDL E++AY
Sbjct: 10 NPFDRKQFYDIQAPSTFTNTYVGKTLVNKSAGTFSSTDALKGRVFEVNLGDL-TLEDNAY 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LRA++VQG +LTNF GM FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I
Sbjct: 69 RKVKLRADEVQGNKILTNFHGMDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIA 128
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR NQVK+T YAQ+S++R++R+KM EI+ + ++ L L K I EVI REIEK+T
Sbjct: 129 FTKRQANQVKKTTYAQSSKLREVRKKMVEILTREVSNSTLSQLTSKLIPEVISREIEKST 188
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
+I+PLQNV IRKVK+LK PKFDLG L+ +HG+ SE+ G KV
Sbjct: 189 QTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEASEEKGKKV 230
>gi|410917988|ref|XP_003972468.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Takifugu
rubripes]
Length = 229
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 172/228 (75%), Gaps = 12/228 (5%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+GKTLVTRTQGT+IAS+GLK RV+EVSL DL N+E A+RK +L AEDVQGKN L
Sbjct: 2 FNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDEV-AFRKFKLIAEDVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTKR NQ+++T YAQ
Sbjct: 61 TNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKRRNNQIRKTSYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+
Sbjct: 121 HQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKM 180
Query: 198 LKAPKFDLGKLMEVHGDY---------SEDVGVKVDRP--ADEPIPEA 234
LK PKF+LGKLME+HG+ +D G KV+R + PI E+
Sbjct: 181 LKKPKFELGKLMELHGEGGAGSAAKAPGDDTGAKVERADGYEPPIQES 228
>gi|148683435|gb|EDL15382.1| mCG1128, isoform CRA_a [Mus musculus]
Length = 227
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 171/226 (75%), Gaps = 10/226 (4%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN L
Sbjct: 2 FNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ
Sbjct: 61 TNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+
Sbjct: 121 HQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKM 180
Query: 198 LKAPKFDLGKLMEVHGD-------YSEDVGVKVDRPA--DEPIPEA 234
LK PKF+LGKLME+HG+ ++ G KV+R + P+ E+
Sbjct: 181 LKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYEPPVQES 226
>gi|323336330|gb|EGA77599.1| Rps1ap [Saccharomyces cerevisiae Vin13]
Length = 255
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 166/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTXLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
>gi|346473353|gb|AEO36521.1| hypothetical protein [Amblyomma maculatum]
Length = 233
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 168/228 (73%), Gaps = 14/228 (6%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
+ VRN+GKT V RTQGTKIASEGLK RVFEVS DL N E+ A+RK RL AE+VQG+NVL
Sbjct: 2 YTVRNIGKTFVNRTQGTKIASEGLKGRVFEVSQADLTNGED-AFRKFRLIAEEVQGRNVL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCIGFTK+ NQ+K+TCYAQ
Sbjct: 61 TNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCIGFTKKCANQLKKTCYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
+Q+R IR+KM E+M+ + +S LK +V K I IG++IEK+ IYPL +V IRKVK+
Sbjct: 121 HNQVRLIRKKMTEMMILEVSSTSLKEVVNKLIPGSIGKDIEKSCQHIYPLHDVLIRKVKV 180
Query: 198 LKAPKFDLGKLMEVHGDYS-------------EDVGVKVDRPADEPIP 232
LK PKF+LGKL+E+HG+ + + GVKVDRP P
Sbjct: 181 LKKPKFELGKLLELHGEGTGKGGASTTATAAKGEEGVKVDRPEGYEPP 228
>gi|384486461|gb|EIE78641.1| 40S ribosomal protein S1 [Rhizopus delemar RA 99-880]
gi|384496920|gb|EIE87411.1| 40S ribosomal protein S1 [Rhizopus delemar RA 99-880]
Length = 266
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/243 (55%), Positives = 170/243 (69%), Gaps = 10/243 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYDIKAPS F VR VGKTLV RTQG + A++ L RV E+SLGDL +E ++
Sbjct: 22 DPFTRKDWYDIKAPSMFEVRQVGKTLVNRTQGLRNANDSLNGRVVEMSLGDLSKDESRSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L+ +++QGKN LTNF GM TTDKLRS+V+KW +LIEA+VD+KTTD + +RLF I
Sbjct: 82 RKIKLKVDEIQGKNCLTNFNGMDMTTDKLRSMVKKWQSLIEAFVDIKTTDGYLVRLFAIS 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIA-------EVIG 174
FT R NQ+K+T YAQ+SQIRQIR+KM EIM +A++CDLK LV K + + I
Sbjct: 142 FTARRRNQIKKTTYAQSSQIRQIRKKMFEIMTEEASACDLKELVAKVTSSASQSAQDAIA 201
Query: 175 REIEKATSSIYPLQNVFIRKVKILKAPKFDLG---KLMEVHGDYSEDVGVKVDRPADEPI 231
IEKA IYPLQN ++RKVKILKAPKFD+ L +D G K + EP
Sbjct: 202 VRIEKACQGIYPLQNTYVRKVKILKAPKFDVSALLALHGGAAAAGDDTGAKATKEFVEPP 261
Query: 232 PEA 234
+A
Sbjct: 262 IQA 264
>gi|402881043|ref|XP_003904091.1| PREDICTED: 40S ribosomal protein S3a-like [Papio anubis]
Length = 263
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/242 (55%), Positives = 175/242 (72%), Gaps = 11/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWY++KA + F +RN+GKTLVTRTQGTKIAS+ LK VFEVSL D+ N E A+
Sbjct: 23 DPFSKKDWYNVKAAAMFNIRNIGKTLVTRTQGTKIASDSLKGCVFEVSLADVQNNE-FAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LT F GM DK+ S+V+KW T+IEA++DVKTT + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTKFHGMDLIHDKMCSIVKKWQTMIEAHIDVKTTHGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+ QI +KM EIM + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVHQI-QKMMEIMTQEVPKNDLKKMVNKLILDSIGKDIEKAC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK KF+LGKLME+HG+ S + G KV+R + P+
Sbjct: 201 QSIYPLHDVFVRKVKMLKKLKFELGKLMELHGEGSSSGKVTGDKTGAKVERTDGYERPVQ 260
Query: 233 EA 234
E+
Sbjct: 261 ES 262
>gi|366998838|ref|XP_003684155.1| 40S ribosomal protein S1 [Tetrapisispora phaffii CBS 4417]
gi|357522451|emb|CCE61721.1| hypothetical protein TPHA_0B00490 [Tetrapisispora phaffii CBS 4417]
Length = 255
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 165/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDK+RS+VRKW TLIE V VKT D++ +R+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIETNVTVKTADDYVIRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQ+KR YAQ+S IR IR+ + EIM + + L L K I EV+ +EIE AT
Sbjct: 142 FTRKQSNQIKRHAYAQSSHIRAIRKVISEIMTREVQNSTLAQLTSKLIPEVMNKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ IRKVK+LK PKFDLG LM +HG S E+ G KV DE
Sbjct: 202 KDIFPLQNIHIRKVKLLKQPKFDLGALMALHGQASGEEKGKKVSGFKDE 250
>gi|449688594|ref|XP_004211786.1| PREDICTED: 40S ribosomal protein S3a-like [Hydra magnipapillata]
Length = 263
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 166/211 (78%), Gaps = 1/211 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAPS F VR +GKT+V+RT GTKIAS+GLK RVFE++ DL N +E ++
Sbjct: 22 DPFSKKDWYDVKAPSNFNVRTIGKTVVSRTVGTKIASDGLKGRVFELAQADL-NNDEVSF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQG+NV+TNF GMS TTDKLRSL++KW T IE +VDVKTTD + LR F IG
Sbjct: 81 RKFKLVAEDVQGRNVITNFHGMSMTTDKLRSLMKKWRTCIEGHVDVKTTDGYLLRFFAIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ N +K+TCYA++S ++ IR+KM +I+ + A DLK +V K + + +G +IEK+
Sbjct: 141 FTKKRNNSIKKTCYAKSSLVKAIRKKMVDIITREVAEKDLKDVVNKLLPDSMGADIEKSC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
+IYPLQ+ IRKVK LK PKFDL KLME+H
Sbjct: 201 QNIYPLQDCHIRKVKCLKKPKFDLHKLMEMH 231
>gi|323307817|gb|EGA61079.1| Rps1bp [Saccharomyces cerevisiae FostersO]
Length = 255
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+ ++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDXSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVSGFKDE 250
>gi|403214585|emb|CCK69086.1| hypothetical protein KNAG_0B06590 [Kazachstania naganishii CBS
8797]
Length = 255
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FTTDKLRS+VRKW TLIEA V VKT+D + +R+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSMVRKWQTLIEANVTVKTSDEYVIRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDVGALMALHGEGSAEEKGKKVAGFNDE 250
>gi|403216153|emb|CCK70651.1| hypothetical protein KNAG_0E03980 [Kazachstania naganishii CBS
8797]
Length = 255
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 167/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN+LTNF G+ FTTDKLRS+VRKW TLIEA V VKT+D + +R+F I
Sbjct: 82 RKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSMVRKWQTLIEANVTVKTSDEYVIRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQNV IRKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNVHIRKVKLLKQPKFDVGALMALHGEGSAEEKGKKVAGFNDE 250
>gi|124505117|ref|XP_001351300.1| 40S ribosomal protein S3A, putative [Plasmodium falciparum 3D7]
gi|74894163|sp|O97313.1|RS3A_PLAF7 RecName: Full=40S ribosomal protein S3a
gi|4494003|emb|CAB39062.1| 40S ribosomal protein S3A, putative [Plasmodium falciparum 3D7]
Length = 262
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/234 (55%), Positives = 171/234 (73%), Gaps = 5/234 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+WYD+KAP F VRN GKTLVT+T G K+A++ LK R++EV+L DL N+E+ A
Sbjct: 21 TDVFTKKEWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDSLKGRIYEVNLADLNNDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KI+L + + ++ T+F G+S T DKL SL+RK +TLIE + DVKT DN+ LR+FCI
Sbjct: 81 HKKIKLSCDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGHTDVKTLDNYHLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ NQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+KFI E IG+EIEK
Sbjct: 141 AFTKKRQNQTKSTCYAQTSQIKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQ 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA 234
IYPLQNV IRKVKILK PK D+ KLME+H D E+ G V+ +PE+
Sbjct: 201 CKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDPKEESGKNVN-----ALPES 249
>gi|269969564|sp|A5JSW9.1|RS3A_BOMMA RecName: Full=40S ribosomal protein S3a
gi|146742935|gb|ABQ42714.1| s3a protein [Bombyx mandarina]
Length = 263
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/240 (56%), Positives = 173/240 (72%), Gaps = 7/240 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TLIEA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS---EDVGVKVDRPA--DEPIPEA 234
A IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP + P+ E+
Sbjct: 203 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKREAGDKSERPEGYEPPVQES 262
>gi|388492696|gb|AFK34414.1| unknown [Lotus japonicus]
Length = 245
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/224 (56%), Positives = 164/224 (73%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+D+KAP F+V N+GKT V +TQG K +S+ LK RVFE SLGDL E+ Y
Sbjct: 21 DPFTRKEWFDLKAPKTFKVTNIGKTPVNKTQGNKHSSDALKGRVFESSLGDLNQNEDAQY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K +LR +DVQGKN LTNF MSFT+DKL+SLVRKW +LIE + V T+D +TLRLFCI
Sbjct: 81 AKFKLRVDDVQGKNCLTNFHAMSFTSDKLKSLVRKWQSLIEGNLLVNTSDGYTLRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+K+T YAQ+S++RQIR+KM E++ + AS +LK L+ K I IG+EIEK
Sbjct: 141 FTKKRQNQIKKTSYAQSSKVRQIRKKMFEVVTREVASGNLKELIAKLIPNAIGKEIEKEC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR 225
IYPL++V++ KVKI+KAPK D E+HG+ S D G V R
Sbjct: 201 HGIYPLKDVYVSKVKIVKAPKLDGFGFQELHGESSADAGSAVKR 244
>gi|323347343|gb|EGA81616.1| Rps1ap [Saccharomyces cerevisiae Lalvin QA23]
Length = 255
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 165/229 (72%), Gaps = 1/229 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +K+W+DIKAPS F RNVGKTLV ++ K AS+ LK RV EV L DL E+H++
Sbjct: 22 DPFTRKEWFDIKAPSTFENRNVGKTLVNKSTXLKSASDALKGRVVEVCLADLQGSEDHSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I
Sbjct: 82 RKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EV +EIE AT
Sbjct: 142 FTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVXNKEIENAT 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADE 229
I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E+ G KV DE
Sbjct: 202 KDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
>gi|317138781|ref|XP_003189085.1| 40S ribosomal protein S1 [Aspergillus oryzae RIB40]
Length = 219
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 153/189 (80%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR +++QGKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCTLSQLTTKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNV 190
IYPLQNV
Sbjct: 202 QGIYPLQNV 210
>gi|240277025|gb|EER40535.1| 40S ribosomal protein S3A [Ajellomyces capsulatus H143]
Length = 245
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/234 (58%), Positives = 176/234 (75%), Gaps = 12/234 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KD Y +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+
Sbjct: 22 DPFSRKDEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREI+K+
Sbjct: 142 FTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKSI 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPEA 234
S+ KVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+
Sbjct: 201 SA----------KVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 244
>gi|444516045|gb|ELV11042.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 264
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/242 (54%), Positives = 172/242 (71%), Gaps = 10/242 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F ++N GKTLVTRT GTKI S+ LK RVFE SL DL N+E +
Sbjct: 23 DPFSKKDWYDVKAPAMFNIKNTGKTLVTRTPGTKIESDSLKGRVFEESLEDLQNDEV-TF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF G+ T DK+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGVDLTHDKMCSMVKKWQTMIEAHVDVKTTDGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
K+ NQ+++T Y Q+ QI +KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 VIKKCNNQIRKTSYGHHQQVCQIWKKMMEIMTQELQTNDLKEVVNKLIPDNIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK P+FDLGK ME HG+ S ++ G KV+R + P+
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPRFDLGKFMEFHGEGSSSGKATGDETGAKVERADGYEPPVQ 261
Query: 233 EA 234
E+
Sbjct: 262 ES 263
>gi|74938351|sp|Q95V35.1|RS3A_SPOFR RecName: Full=40S ribosomal protein S3a
gi|16566722|gb|AAL26579.1|AF429977_1 ribosomal protein S3A [Spodoptera frugiperda]
Length = 264
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 173/241 (71%), Gaps = 8/241 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TL+EA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----DVGVKVDRPA--DEPIPE 233
A IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP + P+ E
Sbjct: 203 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEAGDKSERPEGYEPPVQE 262
Query: 234 A 234
+
Sbjct: 263 S 263
>gi|50812449|gb|AAT81418.1| ribosomal protein S3a [Felis catus]
Length = 222
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 169/222 (76%), Gaps = 10/222 (4%)
Query: 22 NVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFW 81
N+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF
Sbjct: 1 NIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFH 59
Query: 82 GMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQI 141
GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+
Sbjct: 60 GMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQV 119
Query: 142 RQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 201
RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK P
Sbjct: 120 RQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKP 179
Query: 202 KFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
KF+LGKLME+HG+ S ++ G KV+R + P+ E+
Sbjct: 180 KFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQES 221
>gi|119625398|gb|EAX04993.1| ribosomal protein S3A, isoform CRA_f [Homo sapiens]
Length = 263
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 155/194 (79%), Gaps = 1/194 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A
Sbjct: 22 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-A 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 200
Query: 181 TSSIYPLQNVFIRK 194
SIYPL +VF+RK
Sbjct: 201 CQSIYPLHDVFVRK 214
>gi|315115455|gb|ADT80700.1| ribosomal protein S3A [Euphydryas aurinia]
Length = 264
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 162/213 (76%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TL+EA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ A+ +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVANSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A SIYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 203 ACHSIYPLRDVCIRKVKVLKRPRFEIAKLMELH 235
>gi|258617568|gb|ACV83781.1| ribosomal protein S3A [Heliconius melpomene]
gi|342356445|gb|AEL28881.1| ribosomal protein S3A [Heliconius melpomene cythera]
Length = 264
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 162/213 (76%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TL+EA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ A+ +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVANSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A SIYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 203 ACHSIYPLRDVCIRKVKVLKRPRFEISKLMELH 235
>gi|355567768|gb|EHH24109.1| hypothetical protein EGK_07706 [Macaca mulatta]
Length = 226
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 171/226 (75%), Gaps = 11/226 (4%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+GKTL+TRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN L
Sbjct: 2 FNIRNIGKTLITRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ
Sbjct: 61 TNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKHNNQIRKTSYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
Q+RQI RKM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+
Sbjct: 121 HQQVRQI-RKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLYDVFVRKVKM 179
Query: 198 LKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIPEA 234
LK PKF+LGKLME+HG+ S ++ G KV+R + P+ E+
Sbjct: 180 LKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQES 225
>gi|167517459|ref|XP_001743070.1| hypothetical protein [Monosiga brevicollis MX1]
gi|269969587|sp|A9USH8.1|RS3A_MONBE RecName: Full=40S ribosomal protein S3a
gi|163778169|gb|EDQ91784.1| predicted protein [Monosiga brevicollis MX1]
Length = 259
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 176/237 (74%), Gaps = 7/237 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F KK+WYD+KAPS F+ R VGKT V RT GTK++++GL+ RV+E+SL DL N++E +
Sbjct: 22 DVFTKKEWYDVKAPSYFKKRQVGKTPVNRTAGTKLSADGLRGRVYEMSLADL-NDDESTF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++L+ E++QG LTNF GMS TTDKLRSLV+KW +LIEA+VDVKT D + LR+F IG
Sbjct: 81 RKVKLQVEEIQGTECLTNFHGMSLTTDKLRSLVKKWRSLIEAFVDVKTNDGYVLRIFSIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ N ++TCYAQ++Q R +R KM EIM + A+CDLK V K + IG+EI+K
Sbjct: 141 FTKKQANSDRKTCYAQSAQKRALRAKMVEIM-QREATCDLKEFVSKLMPGTIGQEIQKKC 199
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPAD--EPIPE 233
SI+PLQ+V+IRKVK+LK P+FD+ KL+E+HG+ + D G V + + EP P+
Sbjct: 200 QSIFPLQDVYIRKVKVLKKPRFDVSKLLELHGEAGGVTADKGKTVAKSGEFVEPKPQ 256
>gi|343459205|gb|AEM37761.1| V-Fos transformation effector-like protein [Epinephelus bruneus]
Length = 206
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 159/197 (80%), Gaps = 1/197 (0%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+GKTLVTRTQGT+IAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN L
Sbjct: 2 FNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ
Sbjct: 61 TNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA SIYPL +V++RKVK+
Sbjct: 121 HQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKM 180
Query: 198 LKAPKFDLGKLMEVHGD 214
LK PKF+LGKLME+HG+
Sbjct: 181 LKKPKFELGKLMELHGE 197
>gi|418210374|gb|AFX63825.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
gi|418210376|gb|AFX63826.1| 40S ribosomal protein 3A, partial [Botryllus schlosseri]
Length = 212
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 159/208 (76%), Gaps = 1/208 (0%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
KDWYD+KAP+ F+ R +GKTLV+RT GTKIAS+GLK RVFE + DL + +E YRK+RL
Sbjct: 1 KDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASDGLKGRVFECNQADL-HGDESTYRKMRL 59
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
E+VQGK+ LTNF GMS T DKL S+V+KW TLIE+ VD+ TTD + +RLFCIGFT R
Sbjct: 60 IVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIESNVDLMTTDGYKVRLFCIGFTHRR 119
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
NQ+K+T YAQ QIR IRRKM EIM + S DL+ V K I + I ++IEKA IYP
Sbjct: 120 NNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSDLREFVNKLIPDSIAKDIEKACQGIYP 179
Query: 187 LQNVFIRKVKILKAPKFDLGKLMEVHGD 214
L +V+IRKVKILK PKFD+G+LME+HG+
Sbjct: 180 LHDVYIRKVKILKKPKFDVGRLMEIHGE 207
>gi|357613789|gb|EHJ68722.1| s3a protein [Danaus plexippus]
Length = 263
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRLVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TL+EA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ A +LK +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVAGSELKEVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A SIYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 203 ACLSIYPLRDVCIRKVKVLKRPRFEIAKLMELH 235
>gi|195450631|ref|XP_002072567.1| GK13664 [Drosophila willistoni]
gi|269969579|sp|B4NHI4.1|RS3A_DROWI RecName: Full=40S ribosomal protein S3a
gi|194168652|gb|EDW83553.1| GK13664 [Drosophila willistoni]
Length = 268
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/245 (54%), Positives = 173/245 (70%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIINNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD SE V G VDRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDISKLLELHGDGGGKTSEAVVSAEGAVVDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|269969634|sp|Q7RM92.2|RS3A_PLAYO RecName: Full=40S ribosomal protein S3a
Length = 262
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/234 (55%), Positives = 169/234 (72%), Gaps = 5/234 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+WYD+ AP F VR GKTLVT+T G K+A++GLK R++EV+L DL N+E+ A
Sbjct: 21 TDVFTKKEWYDLNAPKMFMVRKFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++KI+L + + ++ T+F G+S T DKL SL+RK +TLIE DVKT DN+ LR+FCI
Sbjct: 81 HKKIKLICDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGCTDVKTIDNYHLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+K I E IG+E+EK
Sbjct: 141 AFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAEASKVLLKDLVKKIIPESIGKEVEKQ 200
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA 234
I+PLQNV IRKVKILK PK D+ KLME+H D ED G V + +PE+
Sbjct: 201 CKKIFPLQNVLIRKVKILKRPKLDISKLMELHSDPKEDSGKNV-----KSLPES 249
>gi|403297121|ref|XP_003939433.1| PREDICTED: 40S ribosomal protein S3a-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403297123|ref|XP_003939434.1| PREDICTED: 40S ribosomal protein S3a-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 270
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 173/247 (70%), Gaps = 9/247 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+K+ YD+KAP+ F +RN+GKTLV TQGT IAS+GLK RVFEVSL D N E A+
Sbjct: 23 DPFSKEGRYDVKAPAMFNIRNIGKTLVAGTQGTNIASDGLKGRVFEVSLADWQNNEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQ KN LTNF G T DK+ S+V+ W T+ EA+V VK TD + LRLFC+G
Sbjct: 82 RKFKLMTEDVQDKNCLTNFHGADLTRDKMCSMVKTWQTMTEAHVAVKATDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+ +T YAQ Q+RQI +KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 142 FTKKCNNQIWKTSYAQHQQVRQIWKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPADEPIPEA 234
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R AD P
Sbjct: 202 QSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDEKGAKVER-ADGYEPPV 260
Query: 235 PTEVIGA 241
V+ +
Sbjct: 261 QESVLSS 267
>gi|126002490|ref|XP_001352361.1| GA15280 [Drosophila pseudoobscura pseudoobscura]
gi|195173581|ref|XP_002027566.1| GL18386 [Drosophila persimilis]
gi|121992361|sp|Q29CU2.1|RS3A_DROPS RecName: Full=40S ribosomal protein S3a
gi|269969576|sp|B4H9N7.1|RS3A_DROPE RecName: Full=40S ribosomal protein S3a
gi|54640329|gb|EAL29315.1| GA15280 [Drosophila pseudoobscura pseudoobscura]
gi|194114478|gb|EDW36521.1| GL18386 [Drosophila persimilis]
Length = 268
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 173/245 (70%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD +E V G VDRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKTTEAVVSAEGAVVDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|195402153|ref|XP_002059671.1| GJ21872 [Drosophila virilis]
gi|269969578|sp|B4MEW8.1|RS3A_DROVI RecName: Full=40S ribosomal protein S3a
gi|194155885|gb|EDW71069.1| GJ21872 [Drosophila virilis]
gi|263359707|gb|ACY70543.1| hypothetical protein DVIR88_6g0080 [Drosophila virilis]
Length = 268
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 173/245 (70%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD +E V G +DRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKTTEAVVSAEGAVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|268306440|gb|ACY95341.1| ribosomal protein S3A [Manduca sexta]
Length = 264
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 160/213 (75%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TLIEA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLNQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A IYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 203 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 235
>gi|389608109|dbj|BAM17666.1| ribosomal protein S3A [Papilio xuthus]
gi|389610799|dbj|BAM19010.1| ribosomal protein S3A [Papilio polytes]
Length = 264
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TL+EA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A SIYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 203 ACLSIYPLRDVCIRKVKVLKRPRFEISKLMELH 235
>gi|17864162|ref|NP_524618.1| ribosomal protein S3A, isoform A [Drosophila melanogaster]
gi|386763373|ref|NP_001245404.1| ribosomal protein S3A, isoform F [Drosophila melanogaster]
gi|194913716|ref|XP_001982755.1| GG16465 [Drosophila erecta]
gi|269969573|sp|B3P9W1.1|RS3A_DROER RecName: Full=40S ribosomal protein S3a
gi|290457688|sp|P55830.4|RS3A_DROME RecName: Full=40S ribosomal protein S3a; AltName: Full=C3 protein
gi|2739184|gb|AAC62117.1| ribosomal protein S3a [Drosophila melanogaster]
gi|7304341|gb|AAF59372.1| ribosomal protein S3A, isoform A [Drosophila melanogaster]
gi|190647971|gb|EDV45274.1| GG16465 [Drosophila erecta]
gi|383293071|gb|AFH06764.1| ribosomal protein S3A, isoform F [Drosophila melanogaster]
Length = 268
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/245 (52%), Positives = 170/245 (69%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------EDVGVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G +DRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|229892355|gb|ACQ89821.1| LD08549p [Drosophila melanogaster]
Length = 270
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/245 (52%), Positives = 170/245 (69%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 25 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 84
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 85 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 144
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 145 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 204
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------EDVGVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G +DRP +
Sbjct: 205 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEP 264
Query: 230 PIPEA 234
P+ EA
Sbjct: 265 PVQEA 269
>gi|194770650|ref|XP_001967404.1| GF19047 [Drosophila ananassae]
gi|269969572|sp|B3N1G9.1|RS3A_DROAN RecName: Full=40S ribosomal protein S3a
gi|190618135|gb|EDV33659.1| GF19047 [Drosophila ananassae]
Length = 268
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 172/245 (70%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTIDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIINNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDV-----GVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD S D G +DRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSSDAVVSTEGAVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|325302808|tpg|DAA34106.1| TPA_exp: 40S ribosomal protein S3a [Amblyomma variegatum]
Length = 214
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF +KDWYD+KAP+ + VRN+GKT V RTQGTKIASEGLK RVFEVS DL N E+ A
Sbjct: 22 VDPFTRKDWYDVKAPTMYTVRNIGKTFVNRTQGTKIASEGLKGRVFEVSQADLTNGED-A 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCI
Sbjct: 81 FRKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ+K+TCYAQ +Q+R IR+KM E+M+ + +S LK +V K I IG++IEK+
Sbjct: 141 GFTKKCANQLKKTCYAQHNQVRLIRKKMTEMMILEVSSTSLKEVVNKLIPGSIGKDIEKS 200
Query: 181 TSSIYPLQNVFIRK 194
IYPL +V IRK
Sbjct: 201 CQHIYPLHDVLIRK 214
>gi|326521440|dbj|BAJ96923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/249 (51%), Positives = 178/249 (71%), Gaps = 11/249 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL---LNEEE 58
DPF +K+WY + APS F R KTL+ RTQG KIA +GLK RVFE+S GDL +EE
Sbjct: 22 DPFTRKEWYHVLAPSTFTNRYCSKTLINRTQGLKIAEDGLKGRVFEISQGDLNKDSKDEE 81
Query: 59 HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
+RK +LR ++VQG+N LT+F M T+DKLR++V+KWHTLIEA+VD+KT+D + LR+F
Sbjct: 82 CYFRKFKLRVDEVQGRNCLTSFHSMELTSDKLRAMVKKWHTLIEAHVDIKTSDEYLLRVF 141
Query: 119 CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
+ TKR PNQ+K+T YAQ SQ+RQIR+K+ +I+ + ++C+LK V K + IG+EIE
Sbjct: 142 VMAVTKRRPNQLKKTSYAQHSQVRQIRKKIFDIITKEVSTCELKEFVSKLTGDAIGKEIE 201
Query: 179 KATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH-GDYSEDVG-------VKVDRPADEP 230
+S+YPLQN IRKVKILK+PK+D+ KL+E++ G SE+ G K++RPA E
Sbjct: 202 AKCNSVYPLQNACIRKVKILKSPKYDVQKLLELYSGSASEESGRVAGGESGKIERPAGEF 261
Query: 231 IPEAPTEVI 239
+ P++ +
Sbjct: 262 VEPVPSDSV 270
>gi|195356032|ref|XP_002044486.1| GM23236 [Drosophila sechellia]
gi|269969577|sp|B4IL76.1|RS3A_DROSE RecName: Full=40S ribosomal protein S3a
gi|194131761|gb|EDW53707.1| GM23236 [Drosophila sechellia]
Length = 268
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/245 (52%), Positives = 170/245 (69%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTIDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------EDVGVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G +DRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|268619094|gb|ACZ13323.1| 40S ribosomal protein S3a [Bursaphelenchus xylophilus]
Length = 256
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 178/232 (76%), Gaps = 4/232 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++K+WYD+KAP+ F R+VGKT+V RTQGT+IAS+ LK RVFEVSLGDL N+ E +
Sbjct: 20 DPFSRKEWYDVKAPAQFTNRDVGKTIVNRTQGTRIASDFLKGRVFEVSLGDL-NKNEFDF 78
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL E+V+G+N LTNF GM+FT DKL S+V+KWHTLIEA V VKTTD + LR+F IG
Sbjct: 79 RKFRLVVEEVKGRNCLTNFNGMTFTRDKLCSIVKKWHTLIEANVTVKTTDGYHLRVFVIG 138
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQV++T YAQTS++R IR KM EI+ + +L +V K I + IG++IEKA
Sbjct: 139 FTKRSPNQVRKTSYAQTSKVRLIRAKMTEIIQKEVNGSNLTEVVNKLIPDSIGKDIEKAC 198
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV-KVDR--PADEP 230
S YPLQ+V+IRKVK++K PKFDLG+L+E+HG+ G KVDR A EP
Sbjct: 199 SRFYPLQDVYIRKVKVVKKPKFDLGQLLEIHGELGASSGSGKVDRADAAYEP 250
>gi|195134056|ref|XP_002011454.1| GI14113 [Drosophila mojavensis]
gi|269969575|sp|B4L7F0.1|RS3A_DROMO RecName: Full=40S ribosomal protein S3a
gi|193912077|gb|EDW10944.1| GI14113 [Drosophila mojavensis]
Length = 268
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 173/245 (70%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTFKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD +E V G +DRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDISKLLELHGDGGGKTTEAVVSAEGAVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|195064175|ref|XP_001996513.1| GH23985 [Drosophila grimshawi]
gi|269969574|sp|B4JZQ9.1|RS3A_DROGR RecName: Full=40S ribosomal protein S3a
gi|193892059|gb|EDV90925.1| GH23985 [Drosophila grimshawi]
Length = 268
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 173/245 (70%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT+D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTSDGYLLRIFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTSKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGVDLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+E+H D +E V G +DRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHNDGGGKTTEAVVSAEGAVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|116787493|gb|ABK24527.1| unknown [Picea sitchensis]
Length = 165
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/144 (82%), Positives = 133/144 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F R VGKTLVTRTQGTKIASEGLKHRVFE+SL DL N+E+ A+
Sbjct: 22 DPFTKKDWYDVKAPSTFNTRTVGKTLVTRTQGTKIASEGLKHRVFELSLADLQNDEDQAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LRAEDVQG+NVLTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCIG
Sbjct: 82 RKIKLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIR 145
FTKR PNQVKRTCYAQ+SQIRQ++
Sbjct: 142 FTKRRPNQVKRTCYAQSSQIRQVK 165
>gi|195469293|ref|XP_002099572.1| RpS3A [Drosophila yakuba]
gi|38047857|gb|AAR09831.1| similar to Drosophila melanogaster RpS3A, partial [Drosophila
yakuba]
gi|194185673|gb|EDW99284.1| RpS3A [Drosophila yakuba]
Length = 268
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/245 (52%), Positives = 170/245 (69%), Gaps = 12/245 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------EDVGVKVDRPA--DE 229
+ IYPL +V+IRKVK+LK P+FD+ KL+++HGD G +DRP +
Sbjct: 203 SCQRIYPLHDVYIRKVKVLKKPRFDVSKLLDLHGDGGGKSVEAVVSSEGAVIDRPEGYEP 262
Query: 230 PIPEA 234
P+ EA
Sbjct: 263 PVQEA 267
>gi|355753350|gb|EHH57396.1| hypothetical protein EGM_07007 [Macaca fascicularis]
Length = 226
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 168/226 (74%), Gaps = 11/226 (4%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+GKTLVTRTQGTKI S GLK VFEVSL DL N+E A+RK +L EDVQGKN L
Sbjct: 2 FNIRNIGKTLVTRTQGTKIVSGGLKGHVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ
Sbjct: 61 TNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKCNNQIRKTSYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
Q+RQI RKM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+
Sbjct: 121 HQQVRQI-RKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLYDVFVRKVKM 179
Query: 198 LKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIPEA 234
LK PKF+LGKLME+HG+ S ++ G KV+R + P+ E+
Sbjct: 180 LKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQES 225
>gi|171692735|ref|XP_001911292.1| hypothetical protein [Podospora anserina S mat+]
gi|269969605|sp|B2B5P2.1|RS3A_PODAN RecName: Full=40S ribosomal protein S1
gi|170946316|emb|CAP73117.1| unnamed protein product [Podospora anserina S mat+]
Length = 259
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 151/189 (79%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPFA+KDWY IKAP+ F +R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFARKDWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V V+TTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVQTTDHYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A+SC L+ L K I EVIGREIEKAT
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASSCTLQQLTSKLIPEVIGREIEKAT 201
Query: 182 SSIYPLQNV 190
IYPLQNV
Sbjct: 202 QGIYPLQNV 210
>gi|219887135|gb|ACL53942.1| unknown [Zea mays]
Length = 158
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/159 (79%), Positives = 140/159 (88%), Gaps = 2/159 (1%)
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIGFTKR PNQVKRTCYAQ SQIR
Sbjct: 1 MNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIR 60
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
QIRRKM EIM+ QA++CDLK LV KFI EVIG+EIEK+TSSI+PLQNVFIRKVKILKAPK
Sbjct: 61 QIRRKMVEIMINQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAPK 120
Query: 203 FDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
FDLGKLMEVHGDY EDVGVK++RP + EA EV A
Sbjct: 121 FDLGKLMEVHGDYKEDVGVKLERPVEG--DEAGQEVAAA 157
>gi|380480423|emb|CCF42444.1| 40S ribosomal protein S1 [Colletotrichum higginsianum]
Length = 216
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 149/189 (78%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+
Sbjct: 22 DPFTRKDWYQIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRILEVSLADLQKDEDHAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I
Sbjct: 82 RKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR PNQ+K+T YA +SQIR IRRKM EI+ +A++C L L K I EVIGREIEK+T
Sbjct: 142 FTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLTQLTSKLIPEVIGREIEKST 201
Query: 182 SSIYPLQNV 190
IYPLQNV
Sbjct: 202 QGIYPLQNV 210
>gi|444722292|gb|ELW62990.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 326
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 171/231 (74%), Gaps = 9/231 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDW +KAP+ F +RN+GKTLVT TQGTKIAS+ LK RVFE+SL DL N+E A+
Sbjct: 14 DPFSKKDWDGVKAPAMFNIRNIGKTLVTGTQGTKIASDNLKGRVFEMSLADLQNDEV-AF 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LT+F GM DK+ S+V+KW T I+A+VDVKTT+ + L LFCIG
Sbjct: 73 RKFKLITEDVQGKNHLTDFHGMDLIHDKMCSMVKKWQTTIKAHVDVKTTNGYLLHLFCIG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
F K+ NQ+++T YAQ Q+RQI++KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 133 F-KKGNNQIRKTSYAQHQQVRQIQKKMMEIMTWEVQTNDLKEVVTKLIPDSIGKDIEKAC 191
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
SIY L +VF+RK+K+L PKF+LGKL E+HG+ S ++ G KV+R
Sbjct: 192 QSIYSLHHVFVRKIKMLMKPKFELGKLTELHGEGSSSGKTTGDETGAKVER 242
>gi|238013406|gb|ACR37738.1| unknown [Zea mays]
gi|413956678|gb|AFW89327.1| hypothetical protein ZEAMMB73_166147 [Zea mays]
Length = 175
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 120/143 (83%), Positives = 132/143 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT+IASEGLKHRVFEV L DL +E+ AY
Sbjct: 22 DPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRIASEGLKHRVFEVCLADLQGDEDQAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTDN+ LRLFCIG
Sbjct: 82 RKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQI 144
FTKR PNQVKRTCYAQ SQIRQ+
Sbjct: 142 FTKRRPNQVKRTCYAQASQIRQV 164
>gi|300120558|emb|CBK20112.2| unnamed protein product [Blastocystis hominis]
Length = 258
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 154/213 (72%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D AKK+WYD++AP+ F VR+V KTLV+RT G KIASEGLK R+FE +LGDL EE Y
Sbjct: 21 DTMAKKEWYDVRAPNQFLVRDVCKTLVSRTSGLKIASEGLKGRIFEANLGDLSKNEEQGY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDVQG +T F+GM T DKL SL++KW TLIE V+V TTD + LRLFCI
Sbjct: 81 RKIKLRVEDVQGDKCITLFYGMDITRDKLGSLIKKWKTLIECNVEVSTTDGYKLRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQ K+TCYAQ SQI +IR KM EI+ + + CDL +LV K E IG I+K
Sbjct: 141 FTRKQDNQNKKTCYAQASQIHRIRAKMVEIITDEVSKCDLATLVPKLCMESIGARIQKEC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ IYPL+N IRKVK++K+PK D KLME H D
Sbjct: 201 NKIYPLENTLIRKVKMIKSPKIDTVKLMEQHAD 233
>gi|300123783|emb|CBK25054.2| unnamed protein product [Blastocystis hominis]
Length = 258
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 154/213 (72%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D AKK+WYD++AP+ F VR+V KTLV+RT G KIASEGLK R+FE +LGDL EE Y
Sbjct: 21 DTMAKKEWYDVRAPNQFLVRDVCKTLVSRTSGLKIASEGLKGRIFEANLGDLSKNEEQGY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDVQG +T F+GM T DKL SL++KW TLIE V+V TTD + LRLFCI
Sbjct: 81 RKIKLRVEDVQGDKCITLFYGMDITRDKLGSLIKKWKTLIECNVEVSTTDGYKLRLFCIA 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQ K+TCYAQ SQI +IR KM EI+ + + CDL +LV K E IG I+K
Sbjct: 141 FTRKQDNQNKKTCYAQASQIHRIRAKMVEIITDEVSKCDLATLVPKLCMESIGARIQKEC 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ IYPL+N IRKVK++K+PK D KLME H D
Sbjct: 201 NKIYPLENTLIRKVKMIKSPKIDTVKLMEQHAD 233
>gi|281206118|gb|EFA80307.1| 40S ribosomal protein S3a [Polysphondylium pallidum PN500]
Length = 260
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 173/237 (72%), Gaps = 13/237 (5%)
Query: 2 DPFAKKDWYDIKAPSCFRVRN----VGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE 57
DPF +K+WY +KAP+ + RN VG T V RTQGTK+AS+GLK RVFEV L D+ +E
Sbjct: 18 DPFTRKEWYSVKAPTAYFARNQMNTVGYTPVNRTQGTKLASDGLKGRVFEVCLADMKQDE 77
Query: 58 EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
H +RKI+LRA+DV+GKNVLTNF+GM T+DKLRSLV KW TLIE +VDVKTTD +TLR+
Sbjct: 78 SHVFRKIKLRADDVEGKNVLTNFYGMDVTSDKLRSLVHKWATLIECFVDVKTTDGYTLRV 137
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
F I FTK+ Q+K+T YA++S+++ IR+KM +I+ + S D+ +V KFI + I +I
Sbjct: 138 FAITFTKKAQKQLKKTSYAKSSKVKLIRKKMFDIINSNVTSSDIGGVVNKFIDQTISAQI 197
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKVDR 225
+K S I+PL N +IRKVK++K+PKF++ KL+E++ + +E+ GV V+R
Sbjct: 198 QKECSYIFPLTNTYIRKVKVMKSPKFEIAKLLELYQNAPSSAPAPVVTEETGVAVER 254
>gi|300120825|emb|CBK21067.2| unnamed protein product [Blastocystis hominis]
Length = 286
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 154/213 (72%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D AKK+WYD++AP+ F VR+V KTLV+RT G KIASEGLK R+FE +LGDL EE Y
Sbjct: 49 DTMAKKEWYDVRAPNQFLVRDVCKTLVSRTSGLKIASEGLKGRIFEANLGDLSKNEEQGY 108
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDVQG +T F+GM T DKL SL++KW TLIE V+V TTD + LRLFCI
Sbjct: 109 RKIKLRVEDVQGDKCITLFYGMDITRDKLGSLIKKWKTLIECNVEVSTTDGYKLRLFCIA 168
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQ K+TCYAQ SQI +IR KM EI+ + + CDL +LV K E IG I+K
Sbjct: 169 FTRKQDNQNKKTCYAQASQIHRIRAKMVEIITDEVSKCDLATLVPKLCMESIGARIQKEC 228
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ IYPL+N IRKVK++K+PK D KLME H D
Sbjct: 229 NKIYPLENTLIRKVKMIKSPKIDTVKLMEQHAD 261
>gi|300176562|emb|CBK24227.2| Ribosomal protein S3a [Blastocystis hominis]
Length = 271
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 154/213 (72%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D AKK+WYD++AP+ F VR+V KTLV+RT G KIASEGLK R+FE +LGDL EE Y
Sbjct: 34 DTMAKKEWYDVRAPNQFLVRDVCKTLVSRTSGLKIASEGLKGRIFEANLGDLSKNEEQGY 93
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDVQG +T F+GM T DKL SL++KW TLIE V+V TTD + LRLFCI
Sbjct: 94 RKIKLRVEDVQGDKCITLFYGMDITRDKLGSLIKKWKTLIECNVEVSTTDGYKLRLFCIA 153
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQ K+TCYAQ SQI +IR KM EI+ + + CDL +LV K E IG I+K
Sbjct: 154 FTRKQDNQNKKTCYAQASQIHRIRAKMVEIITDEVSKCDLATLVPKLCMESIGARIQKEC 213
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ IYPL+N IRKVK++K+PK D KLME H D
Sbjct: 214 NKIYPLENTLIRKVKMIKSPKIDTVKLMEQHAD 246
>gi|112984098|ref|NP_001037255.1| 40S ribosomal protein S3a [Bombyx mori]
gi|74785588|sp|Q64FN2.1|RS3A_BOMMO RecName: Full=40S ribosomal protein S3a
gi|52083012|gb|AAU26070.1| ribosomal protein S3A [Bombyx mori]
gi|54609287|gb|AAV34859.1| ribosomal protein S3A [Bombyx mori]
Length = 263
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 159/213 (74%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 23 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AE VQG+NVL NF GM TTDKLR +V+KW TLIEA +DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + I ++IEK
Sbjct: 143 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A IYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 203 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 235
>gi|300121684|emb|CBK22259.2| unnamed protein product [Blastocystis hominis]
Length = 269
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 154/213 (72%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D AKK+WYD++AP+ F VR+V KTLV+RT G KIASEGLK R+FE +LGDL EE Y
Sbjct: 32 DTMAKKEWYDVRAPNQFLVRDVCKTLVSRTSGLKIASEGLKGRIFEANLGDLSKNEEQGY 91
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDVQG +T F+GM T DKL SL++KW TLIE V+V TTD + LRLFCI
Sbjct: 92 RKIKLRVEDVQGDKCITLFYGMDITRDKLGSLIKKWKTLIECNVEVSTTDGYKLRLFCIA 151
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQ K+TCYAQ SQI +IR KM EI+ + + CDL +LV K E IG I+K
Sbjct: 152 FTRKQDNQNKKTCYAQASQIHRIRAKMVEIITDEVSKCDLATLVPKLCMESIGARIQKEC 211
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ IYPL+N IRKVK++K+PK D KLME H D
Sbjct: 212 NKIYPLENTLIRKVKMIKSPKIDTVKLMEQHAD 244
>gi|444732568|gb|ELW72856.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 232
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 170/232 (73%), Gaps = 10/232 (4%)
Query: 12 IKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDV 71
+K P+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E +RK +L EDV
Sbjct: 1 MKVPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-TFRKFKLITEDV 59
Query: 72 QGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVK 131
QGKN LTNF GM T DK+ S+V+KW T+IEA+V+VKTT+ + LRLFC GFTK+ NQ++
Sbjct: 60 QGKNCLTNFHGMDLTCDKMCSMVKKWQTMIEAHVNVKTTNGYLLRLFCAGFTKKRNNQIR 119
Query: 132 RTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
+T AQ Q+ QIR+KM EIM + + DLK +V K I + IG++IE SIYPL +VF
Sbjct: 120 KTSSAQHQQVCQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEMPCQSIYPLHDVF 179
Query: 192 IRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
+RKVK+LK PKF+LGKLME+HG+ S ++ G KV++ + P+ E+
Sbjct: 180 VRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVEQADGYEPPVQES 231
>gi|154800027|dbj|BAF75056.1| 40S ribosome protein [Prymnesium parvum]
Length = 210
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 150/189 (79%)
Query: 41 LKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTL 100
LK RVFE++L DL +E+ AYRK +L+ ++VQG LT F+GM FTTDKLRS+VRKW +L
Sbjct: 1 LKGRVFEINLADLNKDEDQAYRKFKLQCQEVQGHFCLTQFYGMDFTTDKLRSMVRKWQSL 60
Query: 101 IEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCD 160
IEA+VDVKT D + LRLFCIGFTK+ NQ+K+TCYA +SQ + IR+KMREIM+ +A+SC+
Sbjct: 61 IEAFVDVKTLDGYVLRLFCIGFTKKRMNQLKKTCYANSSQQKAIRKKMREIMLQEASSCE 120
Query: 161 LKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 220
L +LV KFI EVIG+EIEKA S+YPLQN IRKVK+LK PKFDL KL+E+HG EDVG
Sbjct: 121 LSALVNKFIPEVIGKEIEKACQSVYPLQNTHIRKVKMLKMPKFDLTKLLEIHGTSKEDVG 180
Query: 221 VKVDRPADE 229
KV +E
Sbjct: 181 AKVKVAEEE 189
>gi|300175821|emb|CBK21817.2| unnamed protein product [Blastocystis hominis]
Length = 547
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 154/213 (72%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D AKK+WYD++AP+ F VR+V KTLV+RT G KIASEGLK R+FE +LGDL EE Y
Sbjct: 310 DTMAKKEWYDVRAPNQFLVRDVCKTLVSRTSGLKIASEGLKGRIFEANLGDLSKNEEQGY 369
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR EDVQG +T F+GM T DKL SL++KW TLIE V+V TTD + LRLFCI
Sbjct: 370 RKIKLRVEDVQGDKCITLFYGMDITRDKLGSLIKKWKTLIECNVEVSTTDGYKLRLFCIA 429
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT++ NQ K+TCYAQ SQI +IR KM EI+ + + CDL +LV K E IG I+K
Sbjct: 430 FTRKQDNQNKKTCYAQASQIHRIRAKMVEIITDEVSKCDLATLVPKLYMESIGARIQKEC 489
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ IYPL+N IRKVK++K+PK D KLME H D
Sbjct: 490 NKIYPLENTLIRKVKMIKSPKIDTVKLMEQHAD 522
>gi|14318167|gb|AAK59927.1|AF379639_1 ribosomal protein S3a [Heliothis virescens]
Length = 250
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 157/210 (74%), Gaps = 2/210 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E
Sbjct: 9 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 68
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AED QG+NVL NF GM TTDKLR +V+KW TL+EA +DVKTTD + LR+FC
Sbjct: 69 SFRKFRLIAEDAQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFC 128
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ +Q+R IR+KM EI+ + +L+ +V K I + IG++IEK
Sbjct: 129 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNFELREVVNKLIPDSIGKDIEK 188
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLM 209
A IYPL++V IRKVK+LK P+F++ KLM
Sbjct: 189 ACHGIYPLRDVCIRKVKVLKRPRFEISKLM 218
>gi|402880739|ref|XP_003903952.1| PREDICTED: 40S ribosomal protein S3a-like isoform 4 [Papio anubis]
Length = 219
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 156/203 (76%), Gaps = 1/203 (0%)
Query: 12 IKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDV 71
+KAP+ +RN+GK LVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK L EDV
Sbjct: 1 MKAPAMSNIRNIGKALVTRTQGTKIASDGLKRRVFEVSLADLQNDEV-AFRKFTLITEDV 59
Query: 72 QGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVK 131
Q KN LTNF GM T K+ S+V+KW T+IEA+VDVKTTD + L LFC+GFTK+ NQ++
Sbjct: 60 QDKNCLTNFHGMDLTRGKMYSMVKKWQTMIEAHVDVKTTDGYLLHLFCVGFTKKRNNQIR 119
Query: 132 RTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
+T AQ Q+RQIR+KM EIM + + DLK +V K I + G++IEKA SIYPL +VF
Sbjct: 120 KTSCAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSTGKDIEKACQSIYPLHDVF 179
Query: 192 IRKVKILKAPKFDLGKLMEVHGD 214
+RKV++LK PKF+LGKLME+HG+
Sbjct: 180 VRKVQMLKKPKFELGKLMELHGE 202
>gi|56199520|gb|AAV84249.1| ribosomal protein S3 [Culicoides sonorensis]
Length = 215
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 152/195 (77%), Gaps = 2/195 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+KAPS F +R VGKTLV RTQGTKIASEGLK RVFEVSL DL N+ E
Sbjct: 21 DPFTRKDWYDVKAPSMFAIRQVGKTLVNRTQGTKIASEGLKGRVFEVSLADLQNDTDAER 80
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK +L AEDVQG++VLTNF GM TTDKLRS+V+KW TLIE +VDVKTTD + LR+FC
Sbjct: 81 SFRKFKLIAEDVQGRDVLTNFHGMDLTTDKLRSMVKKWQTLIECHVDVKTTDGYLLRVFC 140
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT++ P ++TCYAQ SQI+ IR+KM +I+ +S DLK +V K + + I ++IEK
Sbjct: 141 IGFTQKDPQSQRKTCYAQHSQIKIIRKKMTDIITRDVSSSDLKEVVNKLLPDSIAKDIEK 200
Query: 180 ATSSIYPLQNVFIRK 194
A +YPL +V+IRK
Sbjct: 201 ACLGVYPLHDVYIRK 215
>gi|326432414|gb|EGD77984.1| 40S ribosomal protein S3a-1 [Salpingoeca sp. ATCC 50818]
Length = 262
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 166/212 (78%), Gaps = 1/212 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F KK+WYD+KAP+ F R +GKTLVTR+ GTK+A++GL+ RVFEV+LGDL N +++ +
Sbjct: 22 DVFTKKEWYDVKAPAYFNNRQLGKTLVTRSVGTKLAADGLRGRVFEVALGDL-NGDDNTF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK+R EDV +++L NF GM T DK RSLV+KW T+I+A+VDVKTTD + LR+FCIG
Sbjct: 81 RKVRFVCEDVYERDLLLNFHGMDLTADKKRSLVKKWQTMIQAFVDVKTTDGYVLRVFCIG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTKR + K+T YAQTSQI+ IR+KMR+++ +A++CDLK LV + I E +GREIEKA
Sbjct: 141 FTKRQKHSTKKTAYAQTSQIKAIRQKMRDVVQNEASTCDLKQLVGRLITEEMGREIEKAV 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 213
SIYPL NVF++KVK+LK P+ D KL E+HG
Sbjct: 201 KSIYPLHNVFLKKVKVLKKPRADTAKLYELHG 232
>gi|1752661|emb|CAA71201.1| ribosomal protein S3a [Drosophila melanogaster]
Length = 270
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 159/217 (73%), Gaps = 4/217 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE---E 58
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ K RVFEVSL L ++ E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDIDPE 82
Query: 59 HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
H++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+F
Sbjct: 83 HSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVF 142
Query: 119 CIGFTKRLPNQVKRTCYAQTSQIRQIRR-KMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
CIGFT + ++TCYA SQ+R+IR +M +I+ + + DLK LV K + I ++I
Sbjct: 143 CIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDSIAKDI 202
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
EK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD
Sbjct: 203 EKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 239
>gi|355428404|gb|AER92518.1| hypothetical protein, partial [Triatoma rubida]
Length = 223
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 160/211 (75%), Gaps = 5/211 (2%)
Query: 25 KTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWG 82
KTLV RTQGTKIASEGLK RVFEVSL DL N+ E +YRK RL AEDVQ +NVLTNF G
Sbjct: 7 KTLVNRTQGTKIASEGLKGRVFEVSLADLQNDTDAERSYRKFRLIAEDVQARNVLTNFHG 66
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCIGFT + ++TCYAQ +Q+R
Sbjct: 67 MDLTTDKLRSMVKKWQTLIEANVDVRTTDGYLLRVFCIGFTNKDQLSQRKTCYAQHTQVR 126
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
QIRRKM + + + ++ DL+ +V K I + I ++IEKA IYPL +V+IRKVK+LK P+
Sbjct: 127 QIRRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPR 186
Query: 203 FDLGKLMEVHGD--YSEDVGVKVDRP-ADEP 230
F+L KL+E+HGD S++ G KV RP A EP
Sbjct: 187 FELSKLLELHGDGKGSDEPGAKVSRPEAYEP 217
>gi|219109971|ref|XP_002176738.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411273|gb|EEC51201.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 161/239 (67%), Gaps = 7/239 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY APS F ++ G+TL+T+TQGTKIASEGLK RV E+SL DL E AY
Sbjct: 22 DPFLKKEWYKFVAPSLFATKDAGRTLITKTQGTKIASEGLKGRVIEMSLADLNKNEALAY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L EDVQG N LTNF GM T DKL SL+RK ++IE VD +TTD +T+R+FCI
Sbjct: 82 RKIKLCVEDVQGYNCLTNFHGMDMTRDKLCSLIRKKQSIIEGSVDCRTTDGYTVRMFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+ NQ+K TCYA+++QIR IR KM +M DLKSLV++ I+ IG +I +
Sbjct: 142 FTRPQENQIKNTCYAKSAQIRAIRAKMVSVMSELGTKGDLKSLVKELISAPIGDQIARTA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
+SI+P+++ +IRKVK+LK PKFD+ +LME H + G D P AP E G
Sbjct: 202 TSIFPIKDCYIRKVKVLKKPKFDVTELMEWHSADEKTAG-------DVGTPVAPVEETG 253
>gi|313227975|emb|CBY23124.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 162/213 (76%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY +KAP+ F+ R VG+TLVTR+ GTK+A++GL+ RV+EV+ DL + +E Y
Sbjct: 22 DPFTKKEWYKVKAPAVFKNRTVGQTLVTRSAGTKLAADGLRGRVYEVNQADL-HGDESTY 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+K RL E+VQG N LTNF GM T DK S+++KW T IEA+VDV +TD LRLF +G
Sbjct: 81 KKFRLICEEVQGDNCLTNFHGMELTRDKQCSMIKKWQTKIEAHVDVTSTDGTKLRLFAVG 140
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQVK+T YAQ++Q+R IR+KM IM + ++ D+K++V K + + IG+EI KA
Sbjct: 141 FTKKRQNQVKKTTYAQSNQVRTIRKKMMTIMRREVSTSDMKNIVAKLLPDSIGQEILKAA 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+S YPL +V+IRKVK+LK P+FD+ KL+++HG+
Sbjct: 201 ASTYPLHDVYIRKVKVLKKPRFDMSKLLDMHGE 233
>gi|198431353|ref|XP_002125322.1| PREDICTED: similar to v-fos transformation effector protein [Ciona
intestinalis]
Length = 266
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 170/243 (69%), Gaps = 9/243 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F+ R +GKTLV+RT GTKIA++GLK RVFE + DL + +E Y
Sbjct: 23 DPFSKKDWYDVKAPAVFKNRQIGKTLVSRTVGTKIAADGLKGRVFECNQADL-HGDESTY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++L EDVQGK+ LTNF GMS T DKL S+V+KW TLIEA DV TTD + +R+FCIG
Sbjct: 82 RKMKLIVEDVQGKHCLTNFHGMSLTRDKLCSMVKKWQTLIEASCDVSTTDGYKVRMFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT R NQ+K+T YAQ Q+ IR KM EIM + +L+ LV K I + I ++IEKA
Sbjct: 142 FTHRRSNQIKKTSYAQHMQVINIRAKMIEIMTREVNLGNLRELVNKLIPDSIAKDIEKAC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPADEPIPEA 234
IYPL +V IRKVK+LK PK DLG+LME+HG+ S D G KV+R + E
Sbjct: 202 QGIYPLHDVHIRKVKVLKKPKLDLGRLMEMHGEGSAKTGQSKSDTGSKVERSGGDSY-EP 260
Query: 235 PTE 237
P +
Sbjct: 261 PVQ 263
>gi|355751637|gb|EHH55892.1| hypothetical protein EGM_05186 [Macaca fascicularis]
Length = 247
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/244 (51%), Positives = 165/244 (67%), Gaps = 26/244 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KK WYD+KAP+ F +RN+ KTL+TRTQGTKIAS+GLK VFE
Sbjct: 23 DPFSKKYWYDVKAPAMFSIRNIEKTLITRTQGTKIASDGLKGHVFE-------------- 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
L EDVQGKN LTNF M T +K+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 69 ----LITEDVQGKNCLTNFRAMDLTCNKMCSVVKKWQTMIEAHVDVKTTDGYLLRLFCVG 124
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+ +T YAQ +RQ+R+ M ++M + + DLK +V K I + IG++ EKA
Sbjct: 125 FTKKRNNQIHKTSYAQHQWVRQMRKMMMKVMTREVQTNDLKEVVNKLIPDSIGKDTEKAC 184
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPADEPIPEA 234
S+YPL VF+RKVK+LK P+F+LGKLME+HG+ S ++ G KV+R AD P A
Sbjct: 185 QSVYPLHEVFVRKVKMLKKPRFELGKLMELHGEGSSSGKVTGDETGAKVER-ADGYEPPA 243
Query: 235 PTEV 238
V
Sbjct: 244 QESV 247
>gi|224011892|ref|XP_002294599.1| RS3A, ribosomal protein 3A 40S small ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|220969619|gb|EED87959.1| RS3A, ribosomal protein 3A 40S small ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 259
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 161/240 (67%), Gaps = 7/240 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY + APS F +N GKT++T+TQGTKIASE LK RV E+SL DL N E +Y
Sbjct: 22 DPFLKKEWYKLIAPSIFAEKNCGKTIITKTQGTKIASEYLKGRVIELSLADLNNNEAMSY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK++L EDVQG N L NF GM T DKL SL++K ++IEA VD +TTD + +R+FCI
Sbjct: 82 RKVKLCIEDVQGFNCLLNFHGMDMTRDKLCSLIKKKQSIIEANVDCRTTDGYIVRMFCIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ +Q+K TCYA++ + +QIR KM M A DLK+LV+ IA G EIE+
Sbjct: 142 FTKKQDDQLKETCYAKSGKAKQIRAKMVNTMSTLAGKGDLKTLVKALIAGTTGEEIEREA 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
SSI+P+++ +IRKVK++K PKFD+ LME H D +DVG V P P E +
Sbjct: 202 SSIFPIKDCYIRKVKVIKKPKFDVTALMEWHTDDGQDVGQNV-------APAVPEETVAG 254
>gi|397608572|gb|EJK60029.1| hypothetical protein THAOC_19689 [Thalassiosira oceanica]
Length = 1137
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 155/222 (69%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWY + APS F + GKT++TRTQG KIASEGLK RV E+SLGDL E +Y
Sbjct: 59 DPFLKKDWYKLIAPSIFSQKECGKTIITRTQGQKIASEGLKGRVIELSLGDLNQNEASSY 118
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+L EDVQG N L NF GM T DKL SL++K ++IEA VD +TTD + +R+FCI
Sbjct: 119 RKIKLCVEDVQGFNCLLNFHGMDMTRDKLCSLIKKKQSIIEANVDARTTDGYIVRMFCIA 178
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ +Q+K TCYA++++ R IR KM M A DLK+LV+ +A G EI +
Sbjct: 179 FTKKQDDQLKETCYAKSAKERSIRAKMVSTMATLAGKGDLKTLVKALVAGTTGDEIVREA 238
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
SSI+P+++ +IRKVK++K PKFD+ LME H D +DVG V
Sbjct: 239 SSIFPIKDCYIRKVKVIKKPKFDVTALMEWHNDDGQDVGQNV 280
>gi|218117275|emb|CAQ37765.1| 40S ribosomal protein S3a [Echinorhynchus truttae]
Length = 274
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/232 (52%), Positives = 163/232 (70%), Gaps = 1/232 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYDIKAPS F RN+GKTLV RT GT+IAS+ LK RVF VSL DL + E AY
Sbjct: 23 DPFTKKDWYDIKAPSTFTKRNIGKTLVNRTSGTRIASDSLKGRVFGVSLSDLTDNNEDAY 82
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L E+VQGK LTNF GM T L S ++K T+IEA+ DVKT+D + LRLFC+G
Sbjct: 83 RKFKLIIEEVQGKVCLTNFHGMDVTRGLLFSKIKKRFTMIEAHTDVKTSDGYLLRLFCVG 142
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+R +VK TCYA +Q++ +R+ M + M +S +L+ LVEK + I +EIEK
Sbjct: 143 FTQREEGRVKDTCYASHNQVKSVRKIMVDTMQRDVSSSNLRELVEKLKPDSIAKEIEKLA 202
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPE 233
S++ P+ +V+IRKVK+L+ PKFDL +L+ +HG+ G +V+ +DE +P+
Sbjct: 203 SAVRPIHDVYIRKVKVLRKPKFDLTRLLYMHGEGGSHSGPRVE-TSDERMPD 253
>gi|392334312|ref|XP_003753135.1| PREDICTED: 40S ribosomal protein S3a-like [Rattus norvegicus]
gi|392354902|ref|XP_003751885.1| PREDICTED: 40S ribosomal protein S3a-like [Rattus norvegicus]
Length = 258
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 171/243 (70%), Gaps = 18/243 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +R++ KTLVTRTQG K A +GL+ RVFE L DL N+E+ ++
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRSIRKTLVTRTQGAKTAPDGLEGRVFEGRLADLQNDED-SF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHT-LIEAYVDVKTTDNFTLRLFCI 120
RK++L EDVQGKN F GM T D++ S+V+KW T +IEA VDVKTTD + LRLFC+
Sbjct: 82 RKVKLNTEDVQGKN----FHGMDLTRDRMCSVVKKWQTTMIEALVDVKTTDGYLLRLFCV 137
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ+++ Y SQ+ QI++KM EIM + + DLK +V K I IG++IEK
Sbjct: 138 GFTKKYNNQIRKISY---SQVYQIQKKMMEIMTREVQTNDLKEVVNKLILGSIGKDIEKV 194
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPI 231
SI+PL +VF+RKVK+LK PKF+LGK ME+HG+ E+ KV+R + P+
Sbjct: 195 CQSIHPLHDVFVRKVKMLKKPKFELGKPMELHGEGGGSHKTTGEETSAKVERADGYEPPV 254
Query: 232 PEA 234
E+
Sbjct: 255 QES 257
>gi|157111502|ref|XP_001651595.1| 40S ribosomal protein S3a [Aedes aegypti]
gi|108878364|gb|EAT42589.1| AAEL005901-PA [Aedes aegypti]
Length = 224
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 147/200 (73%), Gaps = 2/200 (1%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EE 58
DPF +KDWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E
Sbjct: 22 VDPFTRKDWYDVKAPNMFSNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAE 81
Query: 59 HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
++RK +L AEDV G+NVL NF GM TTDKLRS+V+KW TLIE VDVKTTD + LR+F
Sbjct: 82 RSFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVF 141
Query: 119 CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
CIGFT + ++TCYAQ SQI++IRRKM I+ S DLK +V K + + I ++IE
Sbjct: 142 CIGFTIKDSVSQRKTCYAQHSQIKEIRRKMTTIITRDVTSSDLKEVVNKLLPDSIAKDIE 201
Query: 179 KATSSIYPLQNVFIRKVKIL 198
K+ IYPL +V+IRKV L
Sbjct: 202 KSCQGIYPLHDVYIRKVSNL 221
>gi|226472678|emb|CAX71025.1| ribosomal protein S3A [Schistosoma japonicum]
Length = 259
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 159/227 (70%), Gaps = 1/227 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 ADPFSKKEWYDIKAPAMFPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEV 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQIEDVQGRHCLTNFHGLELTRDKLCSIVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FT +P + YAQT++I++IR ++ EI+ + ++CDLK +V K I + I ++ KA
Sbjct: 142 TFTPSVPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKA 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRP 226
S IYPL FIRKVK+LK PK DL +LME+HG+ S G V RP
Sbjct: 202 ASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKSTAPGETVSRP 248
>gi|74900190|sp|Q5DAA3.1|RS3A_SCHJA RecName: Full=40S ribosomal protein S3a
gi|56758226|gb|AAW27253.1| unknown [Schistosoma japonicum]
gi|226468640|emb|CAX76348.1| ribosomal protein S3A [Schistosoma japonicum]
gi|226472676|emb|CAX71024.1| ribosomal protein S3A [Schistosoma japonicum]
gi|226472682|emb|CAX71027.1| ribosomal protein S3A [Schistosoma japonicum]
gi|226472686|emb|CAX71029.1| ribosomal protein S3A [Schistosoma japonicum]
gi|226472688|emb|CAX71030.1| ribosomal protein S3A [Schistosoma japonicum]
gi|226472690|emb|CAX71031.1| ribosomal protein S3A [Schistosoma japonicum]
Length = 259
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 159/227 (70%), Gaps = 1/227 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 ADPFSKKEWYDIKAPAMFPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEV 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQIEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FT +P + YAQT++I++IR ++ EI+ + ++CDLK +V K I + I ++ KA
Sbjct: 142 TFTPSVPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKA 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRP 226
S IYPL FIRKVK+LK PK DL +LME+HG+ S G V RP
Sbjct: 202 ASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKSTAPGETVSRP 248
>gi|262401377|gb|ACY66591.1| S3Ae ribosomal protein-like protein [Scylla paramamosain]
Length = 220
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 150/198 (75%), Gaps = 2/198 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF +KDWYD+K+P+ F RNVGKTLV R QGTKIASEGLK+RVFEVSL DL NE E
Sbjct: 23 DPFTRKDWYDVKSPALFFNRNVGKTLVNRAQGTKIASEGLKNRVFEVSLADLQNETDAER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AE VQGKNVL NF G + TTDKLRS+V+KW T IEA DVKTTD + LR+FC
Sbjct: 83 SFRKFRLIAEGVQGKNVLYNFHGFNLTTDKLRSMVKKWQTCIEANADVKTTDGYILRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT+++ +Q ++T YAQ +Q++ IR+KM +I+ AS +LK +V K I + + +I K
Sbjct: 143 IGFTEKVSSQTRKTAYAQHTQVKNIRKKMVDIITRAVASSELKEVVNKLIPDSMADDIRK 202
Query: 180 ATSSIYPLQNVFIRKVKI 197
A + IYPL+ V IRKVK+
Sbjct: 203 ACNLIYPLKEVHIRKVKV 220
>gi|328867698|gb|EGG16080.1| 40S ribosomal protein S3a [Dictyostelium fasciculatum]
Length = 262
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 154/213 (72%), Gaps = 4/213 (1%)
Query: 2 DPFAKKDWYDIKAPSCF----RVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE 57
DPF +K+WY ++AP+ F ++G T V +T GTK+AS+GLK RVFEVSL D+ EE
Sbjct: 17 DPFTRKEWYSVRAPTVFFPPAAANSIGYTPVNKTMGTKLASDGLKGRVFEVSLADMKGEE 76
Query: 58 EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
+RKI+LRA++V GK VLT+F+GM TTDK RSLV KW T+IE YVDVKTTD ++LR+
Sbjct: 77 SQVHRKIKLRADEVDGKTVLTSFYGMDLTTDKARSLVHKWVTMIEVYVDVKTTDGYSLRV 136
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
F + FTKR QV +T YA+TS+++ IR+KM EI+ A A+ D+ + +KF+ + I +I
Sbjct: 137 FAVTFTKRADFQVTKTSYAKTSKVKNIRKKMHEIISASIATSDINQVTKKFLEQTISAQI 196
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 210
+ S+IYPL N FIRKVK+LK PK D +LME
Sbjct: 197 QSECSTIYPLTNTFIRKVKVLKTPKVDGRRLME 229
>gi|444519399|gb|ELV12808.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 231
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 124/232 (53%), Positives = 166/232 (71%), Gaps = 11/232 (4%)
Query: 12 IKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDV 71
+KAP+ F +RN+GKTLVTRTQGTKI S+GLK VFEVSL DL N+E +RK +L EDV
Sbjct: 1 MKAPAMFNIRNIGKTLVTRTQGTKIESDGLKDHVFEVSLADLQNDEV-TFRKFKLITEDV 59
Query: 72 QGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVK 131
QGK+ LT F GM T DK+ S+++KW T+IEA+VDVKTT+ + L LFC GF K+ NQ++
Sbjct: 60 QGKHCLTKFHGMDLTRDKMCSIIKKWQTVIEAHVDVKTTNGYLLCLFCAGFIKKRNNQIQ 119
Query: 132 RTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
+T YAQ Q+ QI++KM EIM + + DLK +V K I + +G++ EKA SIY LQ+V
Sbjct: 120 KTSYAQHQQVHQIQKKMMEIMTREVQTNDLKDVVNKLIPDSVGKDGEKACQSIYLLQDV- 178
Query: 192 IRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
+RKVK+LK PKF+LGKLME+HG+ S + G KV+R + P+ E+
Sbjct: 179 VRKVKMLKKPKFELGKLMELHGEGSSSGKATGNETGTKVERADGYERPVQES 230
>gi|408384433|gb|AFU61903.1| putative 40S ribosomal protein S3A, partial [Polyporales sp.
KUC9061]
Length = 171
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 137/165 (83%)
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
LR ++VQGKN LTNF GMSF++DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR
Sbjct: 1 LRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKR 60
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
P+QVK+T YAQ+SQIR+IRRKM EIM +A SCDLK LV+KF+ E IGREIEKA SIY
Sbjct: 61 RPSQVKKTTYAQSSQIREIRRKMFEIMTREATSCDLKELVQKFVPEAIGREIEKAARSIY 120
Query: 186 PLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
PLQNV++ K KILKAPKFD+ KL+E+HG+ +++ G +V + EP
Sbjct: 121 PLQNVYVHKAKILKAPKFDMAKLLELHGESTDETGTRVVKDFQEP 165
>gi|37654222|gb|AAQ96216.1| LRRGT00003 [Rattus norvegicus]
Length = 454
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 160/214 (74%), Gaps = 9/214 (4%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +R++ KTLVTRTQG K A +GL+ RVFE L DL N+E+ ++
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRSIRKTLVTRTQGAKTAPDGLEGRVFEGRLADLQNDED-SF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHT-LIEAYVDVKTTDNFTLRLFCI 120
RK++L EDVQGKN F GM T D++ S+V+KW T +IEA VDVKTTD + LRLFC+
Sbjct: 82 RKVKLNTEDVQGKN----FHGMDLTRDRMCSVVKKWQTTMIEALVDVKTTDGYLLRLFCV 137
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+ NQ+++ Y SQ+ QI++KM EIM + + DLK +V K I IG++IEK
Sbjct: 138 GFTKKYNNQIRKISY---SQVYQIQKKMMEIMTREVQTNDLKEVVNKLILGSIGKDIEKV 194
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
SI+PL +VF+RKVK+LK PKF+LGK ME+HG+
Sbjct: 195 CQSIHPLHDVFVRKVKMLKKPKFELGKPMELHGE 228
>gi|188572379|gb|ACD65096.1| putative 40S ribosomal protein RPS3A [Novocrania anomala]
Length = 185
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/164 (68%), Positives = 139/164 (84%), Gaps = 1/164 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAPS F VR +GKTLVTRTQGTKIAS+GLK RVFE +L DL N+E ++
Sbjct: 23 DPFSKKDWYDVKAPSMFAVRQIGKTLVTRTQGTKIASDGLKGRVFECALADLQNDE-ISF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQG+NVLTNF GM+ TTDKLRS+V+KW TLIEA VDVKTTD + LR+FCIG
Sbjct: 82 RKFKLMAEDVQGRNVLTNFHGMNLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLV 165
FTK+ NQ+K+TCYAQ++Q+R IR+KM EIM+ + +S DLK +V
Sbjct: 142 FTKKRQNQIKKTCYAQSTQVRAIRKKMVEIMMREVSSNDLKDVV 185
>gi|395818344|ref|XP_003782593.1| PREDICTED: 40S ribosomal protein S3a-like [Otolemur garnettii]
Length = 405
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 148/193 (76%), Gaps = 1/193 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTL+TR QGTKIAS+GLK VFEVSLGDL N E A+
Sbjct: 204 DPFSKKDWYDVKAPAMFNIRNIGKTLLTRIQGTKIASDGLKGCVFEVSLGDLQNNEV-AF 262
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDV KN L++F GM T DK+ S+V+KW T+IEA+VDVKTT + L LFC+G
Sbjct: 263 RKFKLITEDVPCKNCLSDFHGMDLTCDKMCSMVKKWQTVIEAHVDVKTTHGYLLCLFCVG 322
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ N++++T YAQ Q+RQI +KM EIM + DLK +V+K I + IG++IEKA
Sbjct: 323 FTKKHNNKIQKTSYAQHQQVRQIWKKMMEIMTREVQMNDLKEVVDKLIPDSIGKDIEKAC 382
Query: 182 SSIYPLQNVFIRK 194
SIYPL +VFIRK
Sbjct: 383 QSIYPLHDVFIRK 395
>gi|395834612|ref|XP_003790290.1| PREDICTED: 40S ribosomal protein S3a-like [Otolemur garnettii]
Length = 228
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 155/208 (74%), Gaps = 10/208 (4%)
Query: 36 IASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVR 95
IAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM T DK+ S+V+
Sbjct: 21 IASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVK 79
Query: 96 KWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQ 155
KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM +
Sbjct: 80 KWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTRE 139
Query: 156 AASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY 215
+ DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+
Sbjct: 140 VQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEG 199
Query: 216 S-------EDVGVKVDRPA--DEPIPEA 234
S ++ G KV+R + P+ E+
Sbjct: 200 SSSGKATGDETGAKVERADGYEPPVQES 227
>gi|119612991|gb|EAW92585.1| hCG1998718 [Homo sapiens]
Length = 218
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 156/217 (71%), Gaps = 10/217 (4%)
Query: 27 LVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFT 86
LVTRTQGTKIAS+ LK VFEVSL DL N+E A+RK +L EDVQGKN LTNF GM T
Sbjct: 2 LVTRTQGTKIASDDLKGHVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLT 60
Query: 87 TDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRR 146
DK S+V+KW T+IEA+VDVKTTD + L LFC+GF K+ NQ+ +T YAQ Q+RQIR+
Sbjct: 61 RDKTCSMVKKWQTMIEAHVDVKTTDGYLLHLFCVGFNKKRNNQIWKTSYAQHQQVRQIRK 120
Query: 147 KMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLG 206
KM EI + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LG
Sbjct: 121 KMMEITTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELG 180
Query: 207 KLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
+LME+HG+ S ++ G KV R + P+ E+
Sbjct: 181 RLMELHGEGSSSGKATGDETGAKVGRADGYEPPVQES 217
>gi|384487080|gb|EIE79260.1| hypothetical protein RO3G_03965 [Rhizopus delemar RA 99-880]
gi|384500639|gb|EIE91130.1| S-phase specific ribosomal protein cyc07 [Rhizopus delemar RA
99-880]
Length = 230
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 156/228 (68%), Gaps = 10/228 (4%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F VR VGKTLV RTQG + A++ L RV E+SLGDL +E ++RKI+L+ +++QGKN L
Sbjct: 2 FEVRQVGKTLVNRTQGLRNANDSLNGRVVEMSLGDLSKDESRSFRKIKLKVDEIQGKNCL 61
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM TTDKLRS+V+KW +LIEA+VD+KTTD + +RLF I FT R NQ+K+T YAQ
Sbjct: 62 TNFNGMDMTTDKLRSMVKKWQSLIEAFVDIKTTDGYLVRLFAISFTARRRNQIKKTTYAQ 121
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIA-------EVIGREIEKATSSIYPLQNV 190
+SQIRQIR+KM EIM +A++CDLK LV K + + I IEKA IYPLQN
Sbjct: 122 SSQIRQIRKKMFEIMTEEASACDLKELVAKVTSSASQSAQDAIAVRIEKACQGIYPLQNT 181
Query: 191 FIRKVKILKAPKFDLG---KLMEVHGDYSEDVGVKVDRPADEPIPEAP 235
++RKVKILKAPKFD+ L +D G K + EP +A
Sbjct: 182 YVRKVKILKAPKFDVSALLALHGGAAAAGDDTGAKATKEFVEPPIQAS 229
>gi|384493603|gb|EIE84094.1| S-phase specific ribosomal protein cyc07 [Rhizopus delemar RA
99-880]
Length = 230
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 154/223 (69%), Gaps = 10/223 (4%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F VR VGKTLV RTQG + A++ L RV E+SLGDL +E ++RKI+L+ +++QGKN L
Sbjct: 2 FEVRQVGKTLVNRTQGLRNANDSLNGRVVEMSLGDLSKDESRSFRKIKLKVDEIQGKNCL 61
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM TTDKLRS+V+KW +LIEA+VD+KTTD + +RLF I FT R NQ+K+T YAQ
Sbjct: 62 TNFNGMDMTTDKLRSMVKKWQSLIEAFVDIKTTDGYLVRLFAISFTARRRNQIKKTTYAQ 121
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIA-------EVIGREIEKATSSIYPLQNV 190
+SQIRQIR+KM EIM +A++CDLK LV K + + I IEKA IYPLQN
Sbjct: 122 SSQIRQIRKKMFEIMTEEASACDLKELVAKVTSSASQSAQDAIAVRIEKACQGIYPLQNT 181
Query: 191 FIRKVKILKAPKFDLG---KLMEVHGDYSEDVGVKVDRPADEP 230
++RKVKILKAPKFD+ L +D G K + EP
Sbjct: 182 YVRKVKILKAPKFDVSALLALHGGAAAAGDDTGAKATKEFVEP 224
>gi|270056455|gb|ACZ59453.1| hypothetical protein [Pleurotus ostreatus]
Length = 229
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 140/170 (82%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDW+DIKAPS F RNVGKTL R+QG K A++ LK R+ E+SLGDL EE+ ++
Sbjct: 22 DPFSRKDWFDIKAPSIFEQRNVGKTLTNRSQGLKNANDSLKGRIIELSLGDLNKEEDLSF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RKI+LR ++VQGKN LTNF GM FT+DK+RSLVRKW TLIEA+VDVKTTD + LRLF IG
Sbjct: 82 RKIKLRIDEVQGKNCLTNFHGMDFTSDKIRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAE 171
FTKR P QV++T YAQ++QIR+IR+KM EIM ++ +CDLK LV+KF+ E
Sbjct: 142 FTKRRPEQVRKTTYAQSAQIREIRKKMFEIMTRESTNCDLKELVQKFVPE 191
>gi|351712508|gb|EHB15427.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 242
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 164/242 (67%), Gaps = 32/242 (13%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA + +RN+GKT VTRTQGTKIAS+GL VFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKALAMLSIRNIGKTQVTRTQGTKIASDGLTGHVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSVVKKWQTMIEAHVDVKTTDGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK +KM EI+ + + DLK +V K I + IG++IEKA
Sbjct: 142 FTK---------------------KKMMEILTREVQTNDLKEVVNKLIPDSIGKDIEKAC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
IYPL +VF+RKVK+LK PKF+LG+LME+HG+ S ++ G KV+R + P+
Sbjct: 181 QFIYPL-HVFVRKVKMLKNPKFELGELMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 239
Query: 233 EA 234
E+
Sbjct: 240 ES 241
>gi|148683436|gb|EDL15383.1| mCG1128, isoform CRA_b [Mus musculus]
Length = 189
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
Query: 13 KAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQ 72
KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQ
Sbjct: 11 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQ 69
Query: 73 GKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 132
GKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++
Sbjct: 70 GKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRK 129
Query: 133 TCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFI 192
T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+
Sbjct: 130 TSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFV 189
>gi|351704582|gb|EHB07501.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 227
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +R++GK LVTR+QGTKIAS+GLK VFEVSL DL N E A+RK +L +DVQGKN L
Sbjct: 2 FNIRSIGKILVTRSQGTKIASDGLKGCVFEVSLADLQNNEV-AFRKFKLIKDDVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM T DK+ S+V+K T+IEA+VDVKTTD + LRLF +GFTK+ NQ+++T YAQ
Sbjct: 61 TNFHGMDLTHDKMCSMVKKCQTVIEAHVDVKTTDGYLLRLFRVGFTKKRKNQIQKTSYAQ 120
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
Q+ QI++KM EIM + + DLK +V K I + I ++IEK SIYPL +VF+RKVK+
Sbjct: 121 HQQVHQIQKKMMEIMTREVQTNDLKEVVNKLITDSIRKDIEKVCQSIYPLHDVFVRKVKM 180
Query: 198 LKAPKFDLGKLMEVHGDYS 216
LK PKF+LGK ME+HG+ S
Sbjct: 181 LKKPKFELGKFMELHGEGS 199
>gi|330803538|ref|XP_003289762.1| hypothetical protein DICPUDRAFT_98478 [Dictyostelium purpureum]
gi|325080155|gb|EGC33723.1| hypothetical protein DICPUDRAFT_98478 [Dictyostelium purpureum]
Length = 271
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 163/257 (63%), Gaps = 32/257 (12%)
Query: 2 DPFAKKDWYDIKAPSCF----RVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE 57
DPF +K+WY ++AP F +G T V RTQGTK+AS+GLK RVFEVSL D+ +EE
Sbjct: 19 DPFTRKEWYTVRAPGAFFKSGADNKLGFTPVNRTQGTKLASDGLKGRVFEVSLADMKDEE 78
Query: 58 EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
YRKI+LRAEDV+G+NVLTNF+GM TTDKLRSL+ KW LIE +VDVKTTD + LR+
Sbjct: 79 SQVYRKIKLRAEDVEGRNVLTNFYGMDLTTDKLRSLIHKWANLIECFVDVKTTDGYVLRV 138
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFI-AEVIGRE 176
F I FTK+ Q K+T YA+TS+I+ IR+KM +I+ ++ DLK+ VE FI +V G
Sbjct: 139 FSICFTKKNEGQKKKTAYAKTSRIKAIRKKMVDIITETVSTNDLKTCVEYFIGGQVTGSS 198
Query: 177 IEKA-------------TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
+ A SS YP NV++RKVK+LKAPK D KL E++
Sbjct: 199 TDHAGQSLTLTEKIRVEISSQYPCHNVYLRKVKVLKAPKMDAVKLSEIY----------- 247
Query: 224 DRPADEPIPEAPTEVIG 240
A P+ AP E G
Sbjct: 248 ---ASTPMTSAPVEETG 261
>gi|188572460|gb|ACD65136.1| putative 40S ribosomal protein RPS3A [Phoronis muelleri]
Length = 184
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/163 (68%), Positives = 134/163 (82%), Gaps = 1/163 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F +R +GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFTKKDWYDVKAPSMFNIRQIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-IAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AEDVQGKN+LTNF GM+ TTDK RS+V+KW T+IEA VDVKTTD +RLFCIG
Sbjct: 82 RKFKLCAEDVQGKNLLTNFHGMNLTTDKTRSMVKKWQTMIEANVDVKTTDGNLMRLFCIG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSL 164
FTK+ NQVK+TCYAQ++QIR IR+KM EIM + +S D + +
Sbjct: 142 FTKKRNNQVKKTCYAQSTQIRAIRKKMTEIMTREVSSNDFEEV 184
>gi|403273045|ref|XP_003928338.1| PREDICTED: 40S ribosomal protein S3a-like [Saimiri boliviensis
boliviensis]
Length = 219
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 155/215 (72%), Gaps = 10/215 (4%)
Query: 29 TRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTD 88
TRTQGTKIAS+GLK RVFEVSL D N E A+RK +L EDVQGKN LTNF G T D
Sbjct: 5 TRTQGTKIASDGLKGRVFEVSLADWQNAEV-AFRKFKLMTEDVQGKNCLTNFHGTDLTRD 63
Query: 89 KLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKM 148
K+ S+V+ W T+ EA+VDVK TD + L LFC+GFTK+ NQ+++T +AQ Q+RQIR+K+
Sbjct: 64 KMCSMVKTWQTMTEAHVDVKATDGYLLCLFCLGFTKKRNNQIRKTSFAQHQQVRQIRKKL 123
Query: 149 REIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKL 208
EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKL
Sbjct: 124 MEIMPREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKL 183
Query: 209 MEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
ME+HG+ S ++ G KV+R + P+ E+
Sbjct: 184 MELHGEGSSSGKAAGDETGAKVERADGYEPPVQES 218
>gi|326516772|dbj|BAJ96378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
+PF+KK+WYD+KAP+ F+ R +GKT V RT GTKIAS+GLK RVFE SLGDL NE E A+
Sbjct: 23 NPFSKKEWYDVKAPAQFKTRQIGKTPVNRTSGTKIASDGLKGRVFETSLGDL-NENEDAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L E+ QGK LTNF GM TTDKLRS+++K T IE++VD KTTD + LR+F I
Sbjct: 82 RKFKLIIEETQGKVCLTNFHGMDITTDKLRSMIKKKQTTIESFVDAKTTDGYLLRVFAIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT+ ++T YAQ S+++ IR+KM EI+ + DLK +V K + + I ++IEK
Sbjct: 142 FTRNPKGSTRQTSYAQHSKVKAIRKKMMEIINKEVTGSDLKGVVAKLVPDSIAKDIEKYC 201
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
S IYPL +V+IRKVK++K PKFDLG+LM++HG+
Sbjct: 202 SYIYPLGDVYIRKVKVVKKPKFDLGRLMDMHGE 234
>gi|66818183|ref|XP_642751.1| 40S ribosomal protein S3a [Dictyostelium discoideum AX4]
gi|74897295|sp|Q54ZW5.1|RS3A_DICDI RecName: Full=40S ribosomal protein S3a
gi|60470887|gb|EAL68859.1| 40S ribosomal protein S3a [Dictyostelium discoideum AX4]
Length = 273
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 167/249 (67%), Gaps = 25/249 (10%)
Query: 2 DPFAKKDWYDIKAPSCF----RVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE 57
DPF +K+WY ++AP+ F VG T V RTQGTK+AS+GLK RV+EVSL D+ ++E
Sbjct: 17 DPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDDE 76
Query: 58 EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
+RKI+LRAE+V+G+NVLTNF+GM T+DKLRSL+ KW TLIE +VDVKTTD + LR+
Sbjct: 77 SQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRV 136
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFI-------- 169
F I FTK+ +Q K+T YA+TS+++ IR+KM +I+ +S DLK++V+ I
Sbjct: 137 FAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVT 196
Query: 170 ------AEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-------S 216
A + +I SSI+P+ NVFIRKVK+LK PK D KL E++ +
Sbjct: 197 TNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASSATSTIAPT 256
Query: 217 EDVGVKVDR 225
E+VG V+R
Sbjct: 257 EEVGTAVER 265
>gi|5441551|emb|CAB46830.1| Ribosomal protein [Canis lupus familiaris]
Length = 184
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A
Sbjct: 16 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-A 74
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+
Sbjct: 75 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 134
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFI 169
GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I
Sbjct: 135 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLI 183
>gi|221041168|dbj|BAH12261.1| unnamed protein product [Homo sapiens]
Length = 175
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 134/167 (80%), Gaps = 1/167 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 10 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 69 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 128
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKF 168
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K
Sbjct: 129 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKL 175
>gi|158187696|gb|ABW23137.1| ribosomal protein rps3a [Arenicola marina]
Length = 199
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 149/195 (76%), Gaps = 8/195 (4%)
Query: 44 RVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEA 103
RVFEVS+ DL N E +RK +L AE+VQG++VLTNF GM+ TTDK+RS+V+KW TLIEA
Sbjct: 2 RVFEVSMADLQNNET-PFRKFKLIAEEVQGRHVLTNFHGMNMTTDKVRSMVKKWQTLIEA 60
Query: 104 YVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKS 163
+DV+TTD F LR+FCIGFTKR+ NQVK+TCYAQ++Q+R IR+KM EIM + ++ DLK
Sbjct: 61 NIDVRTTDGFLLRMFCIGFTKRV-NQVKKTCYAQSNQVRAIRKKMVEIMTREVSAADLKE 119
Query: 164 LVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS------E 217
+V K I + IG++IEKA IYPL +V +RKVKILK PKFD+GKLME+HG+ S
Sbjct: 120 VVNKLIPDSIGKDIEKACMGIYPLHDVCVRKVKILKKPKFDIGKLMEMHGEGSGSKTVVT 179
Query: 218 DVGVKVDRPADEPIP 232
+ G KVDRP + P
Sbjct: 180 EGGEKVDRPDNYEPP 194
>gi|335772509|gb|AEH58090.1| 40S ribosomal protein S3a-like protein [Equus caballus]
Length = 166
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 134/167 (80%), Gaps = 1/167 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A
Sbjct: 1 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-A 59
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+
Sbjct: 60 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 119
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEK 167
GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K
Sbjct: 120 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNK 166
>gi|38048393|gb|AAR10099.1| similar to Drosophila melanogaster RpS3A, partial [Drosophila
yakuba]
Length = 218
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 143/196 (72%), Gaps = 2/196 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK LV K + I ++IEK
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEK 202
Query: 180 ATSSIYPLQNVFIRKV 195
+ IYPL +V+IRKV
Sbjct: 203 SCQRIYPLHDVYIRKV 218
>gi|402870630|ref|XP_003919502.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3a [Papio
anubis]
Length = 250
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 159/243 (65%), Gaps = 26/243 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW L C G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQV----------RPRVPXSLLCYG 131
Query: 122 -FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
TK Y + +RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 132 CLTKD-----SMVXYDKKEXVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 186
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPI 231
SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R + P+
Sbjct: 187 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPV 246
Query: 232 PEA 234
E+
Sbjct: 247 QES 249
>gi|256084691|ref|XP_002578560.1| 40S ribosomal protein S3A [Schistosoma mansoni]
Length = 259
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 158/227 (69%), Gaps = 1/227 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DPF KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 SDPFTKKEWYDIKAPAMFSKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEY 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQVEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FT +P + YAQ+++IR+IR ++ +I+ + ++CDLK +V K I + I ++ KA
Sbjct: 142 TFTPSVPRSERLHSYAQSTRIRRIRARLIDIIQQEVSTCDLKEVVNKLIPDSIAQDARKA 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRP 226
S I+PL FIRKVK+LK PK DL +LME+HG+ S G V RP
Sbjct: 202 ASWIHPLGETFIRKVKVLKKPKADLARLMELHGESKSAAPGETVSRP 248
>gi|350644765|emb|CCD60519.1| 40S ribosomal protein S3A, putative [Schistosoma mansoni]
Length = 259
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 158/227 (69%), Gaps = 1/227 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DPF KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 SDPFTKKEWYDIKAPAMFSRRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEY 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQVEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FT +P + YAQ+++IR+IR ++ +I+ + ++CDLK +V K I + I ++ KA
Sbjct: 142 TFTPSVPRSERLHSYAQSTRIRRIRARLIDIIQQEVSTCDLKEVVNKLIPDSIAQDARKA 201
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRP 226
S I+PL FIRKVK+LK PK DL +LME+HG+ S G V RP
Sbjct: 202 ASWIHPLGETFIRKVKVLKKPKADLARLMELHGESKSAAPGETVSRP 248
>gi|166406842|gb|ABY87384.1| 40S ribosomal protein S3a [Haliotis diversicolor]
Length = 171
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 20 VRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTN 79
VR +GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E +RK +L AEDVQG+NVLTN
Sbjct: 1 VRQIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-TFRKFKLIAEDVQGRNVLTN 59
Query: 80 FWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTS 139
F GM T DKL S+V+KW TLIEA++DVKTTD + LR+FCIGFTK+ NQVK+TCYAQ +
Sbjct: 60 FHGMDLTRDKLCSMVKKWQTLIEAHLDVKTTDGYLLRIFCIGFTKKRANQVKKTCYAQHT 119
Query: 140 QIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
QI+ IR+KM EI+ + S D+K +V K I + IG++IEKA IYPL +V+
Sbjct: 120 QIKAIRKKMLEIVGREITSNDMKEVVNKLIPDSIGKDIEKACQGIYPLHDVY 171
>gi|68060075|ref|XP_672011.1| 40S ribosomal protein S3A [Plasmodium berghei strain ANKA]
gi|56488710|emb|CAH99066.1| 40S ribosomal protein S3A, putative [Plasmodium berghei]
Length = 210
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 147/201 (73%), Gaps = 5/201 (2%)
Query: 34 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSL 93
T++A++GLK R++EV+L DL N+E+ A++KI+L + + ++ T+F G+S T DKL SL
Sbjct: 2 TELATDGLKGRIYEVNLADLNNDEDQAHKKIKLICDHIINRDCYTDFCGLSITRDKLCSL 61
Query: 94 VRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMV 153
+RK +TLIE DVKT DN+ LR+FCI FTK+ PNQ K TCYAQTSQI++IR+KM +IM
Sbjct: 62 IRKGYTLIEGCTDVKTIDNYHLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMH 121
Query: 154 AQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 213
A+A+ LK LV+K I E IG+E+EK I+PLQNV IRKVKILK PK D+ KLME+H
Sbjct: 122 AEASKVLLKDLVKKIIPESIGKEVEKQCKKIFPLQNVLIRKVKILKRPKLDISKLMELHS 181
Query: 214 DYSEDVGVKVDRPADEPIPEA 234
D ED G V + +PE+
Sbjct: 182 DPKEDSGKNV-----KSLPES 197
>gi|83286443|ref|XP_730163.1| 40S ribosomal protein S3a [Plasmodium yoelii yoelii 17XNL]
gi|23489809|gb|EAA21728.1| 40S ribosomal protein S3a-related [Plasmodium yoelii yoelii]
Length = 210
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 145/199 (72%), Gaps = 5/199 (2%)
Query: 36 IASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVR 95
+A++GLK R++EV+L DL N+E+ A++KI+L + + ++ T+F G+S T DKL SL+R
Sbjct: 4 LATDGLKGRIYEVNLADLNNDEDQAHKKIKLICDHIINRDCYTDFCGLSITRDKLCSLIR 63
Query: 96 KWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQ 155
K +TLIE DVKT DN+ LR+FCI FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+
Sbjct: 64 KGYTLIEGCTDVKTIDNYHLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAE 123
Query: 156 AASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY 215
A+ LK LV+K I E IG+E+EK I+PLQNV IRKVKILK PK D+ KLME+H D
Sbjct: 124 ASKVLLKDLVKKIIPESIGKEVEKQCKKIFPLQNVLIRKVKILKRPKLDISKLMELHSDP 183
Query: 216 SEDVGVKVDRPADEPIPEA 234
ED G V + +PE+
Sbjct: 184 KEDSGKNV-----KSLPES 197
>gi|441619353|ref|XP_004088583.1| PREDICTED: 40S ribosomal protein S3a [Nomascus leucogenys]
gi|119625393|gb|EAX04988.1| ribosomal protein S3A, isoform CRA_a [Homo sapiens]
Length = 195
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 126/151 (83%), Gaps = 1/151 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIM 152
FTK+ NQ+++T YAQ Q+RQIR+KM EIM
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 172
>gi|269969613|sp|B2CAZ2.1|RS3A_TAESO RecName: Full=40S ribosomal protein S3a; AltName: Full=Ts6 protein
gi|170783725|gb|ACB37347.1| Ts6 protein [Taenia solium]
Length = 257
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/226 (51%), Positives = 165/226 (73%), Gaps = 2/226 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KK+WY+++APS F R +TL+TRTQGTKIASEGLK RV ++SLGDL ++ + +
Sbjct: 22 DPFSKKEWYELRAPSMFSNRTCARTLITRTQGTKIASEGLKGRVIQLSLGDLSDKTQDIF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L+ EDVQG++ LTNF GM T DKL +V KW + IEA+VDVKTTD +TLR F I
Sbjct: 82 RKFKLQVEDVQGRHCLTNFHGMDLTRDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ +Q K YAQT++I+++R K+ E++ + A CDLKS+V+K I + IG++
Sbjct: 142 FTKKQEDQ-KSHAYAQTTRIKKLRAKIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEA 200
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRP 226
SSI+PL +RKVK+LK PK DLG+++E+H + +++ G V RP
Sbjct: 201 SSIFPLSGALVRKVKVLKKPKLDLGRILELHSEGKADEFGEGVPRP 246
>gi|148710140|gb|EDL42086.1| mCG2066 [Mus musculus]
Length = 173
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 125/151 (82%), Gaps = 1/151 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIM 152
FTK+ NQ+++T YAQ Q+ QIR+KM EIM
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVCQIRKKMMEIM 172
>gi|241570586|ref|XP_002402816.1| 40S ribosomal protein S3A, putative [Ixodes scapularis]
gi|215500134|gb|EEC09628.1| 40S ribosomal protein S3A, putative [Ixodes scapularis]
Length = 270
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 156/246 (63%), Gaps = 18/246 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYD+KAP+ + VRN+GKT V RTQGTKIASEGLK RVFEVS DL N E+ AY
Sbjct: 23 DPFTRKDWYDVKAPTMYTVRNIGKTFVNRTQGTKIASEGLKGRVFEVSQADLTNGED-AY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW ++A + + D LRL C
Sbjct: 82 RKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQVALKAALYMLLQDGAFLRLHC-- 139
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIA--EVIGREIEK 179
R N KR + +R + R I A++ S ++K + + I IG++IEK
Sbjct: 140 HYLRFQNPRKRWIFENNCFVRVLSRGGCAISTAESHSENIKDTIFRNICIPGSIGKDIEK 199
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------------DVGVKVDRP 226
+ IYPL +V IRKVK+LK PKF+LGKL+E+HG+ + + GVKVDRP
Sbjct: 200 SCQHIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGTSKGGAASTAAVAKGEEGVKVDRP 259
Query: 227 ADEPIP 232
P
Sbjct: 260 EGYEPP 265
>gi|351711719|gb|EHB14638.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 219
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 154/227 (67%), Gaps = 22/227 (9%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+GKT VTRTQG KIAS+GLK R FEVSL DL N+E A++K +L EDVQGKN L
Sbjct: 2 FNIRNIGKTRVTRTQGIKIASDGLKGRAFEVSLADLQNDEV-AFKKFKLITEDVQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
T+ +S T + S +++W ++IEA+VDVKTTD + LRLFC+GFTK+ NQ ++ C
Sbjct: 61 TSMVWISLVTKCVCSTLKRWQSMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQHQQVC--- 117
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
QIR+KM EIM + + DLK V K I + IG++IEKA SIY L +VF+RKVK+
Sbjct: 118 -----QIRKKMMEIMTREVQTNDLKERVNKLILDSIGKDIEKACQSIYSLHDVFVRKVKM 172
Query: 198 LKAPKFDLGKLMEVHGDYS-------EDVGVKVDR------PADEPI 231
LK PKF+LGKLME+HG+ S ++ G KV+ PA E +
Sbjct: 173 LKKPKFELGKLMELHGEGSSSGKATGDNTGAKVEGTDGHEPPAQESV 219
>gi|67473265|ref|XP_652399.1| 40S ribosomal protein S3a [Entamoeba histolytica HM-1:IMSS]
gi|67475508|ref|XP_653448.1| 40S ribosomal protein S3a [Entamoeba histolytica HM-1:IMSS]
gi|56469248|gb|EAL47011.1| 40S ribosomal protein S3a, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56470398|gb|EAL48062.1| 40S ribosomal protein S3a, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 256
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 155/241 (64%), Gaps = 7/241 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P F+ R VG+ +V +T GT+IASE LK RV EV+L DL+ E+
Sbjct: 23 AEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ + EDV GK+ L F G+ TTDKLRS+V+KW TLIE VDVKTTD +R+FCI
Sbjct: 83 AYNYKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCI 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R NQ+K+T YA+++QI++IR+ M ++ +AAS +L V+ + +EI
Sbjct: 143 GFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLRENKLPKEIVAK 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
S ++ + NV+IRKVKILKA K D KL++ H D S V P+ E EV+
Sbjct: 203 CSKVFSMDNVYIRKVKILKAGKIDSLKLLDQHQDTSAPVEA-------APVAEEKGEVVE 255
Query: 241 A 241
A
Sbjct: 256 A 256
>gi|356532802|ref|XP_003534959.1| PREDICTED: 40S ribosomal protein S3a-2-like [Glycine max]
Length = 263
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 127/175 (72%), Gaps = 25/175 (14%)
Query: 36 IASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVR 95
IASE LKHRVF+VSL DL +E+HA++KIRLRAE+VQGKNVLTN WGM TTDKLRSLVR
Sbjct: 22 IASEELKHRVFKVSLVDLQGDEDHAFKKIRLRAENVQGKNVLTNLWGMDLTTDKLRSLVR 81
Query: 96 KWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQ 155
KW TLIEA+V VKT DN TLR I RKMREIM Q
Sbjct: 82 KWQTLIEAHVHVKTIDNHTLR-------------------------TNIHRKMREIMTNQ 116
Query: 156 AASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 210
A SCDLK LV KFI E+IG++I KATSSI P++NVF RKVKILKAPKFDLGKLME
Sbjct: 117 ATSCDLKELVRKFIPEIIGKDIGKATSSIDPVKNVFDRKVKILKAPKFDLGKLME 171
>gi|444725082|gb|ELW65662.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 228
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 153/237 (64%), Gaps = 45/237 (18%)
Query: 8 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLR 67
DWYD+KAP+ F +RN+ KT+VTRTQ TKI SEGLK VFEVS+ DL N+E A+RK +L
Sbjct: 26 DWYDVKAPAMFNIRNIEKTVVTRTQETKIVSEGLKDHVFEVSIADLQNDEA-AFRKFKLI 84
Query: 68 AEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLP 127
EDVQGKN LTN GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+
Sbjct: 85 TEDVQGKNCLTNLHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRN 144
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
NQ+++T YAQ Q R+ RK I+PL
Sbjct: 145 NQIRKTSYAQHQQHRKRHRK---------------------------------GLPIHPL 171
Query: 188 QNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPADE---PIPEA 234
+VF+RKVK+LK PKF+LGKL+E+HG+ S +++G KV+R ADE P+ E+
Sbjct: 172 YDVFVRKVKMLKKPKFELGKLIELHGEGSSSGKATGDEMGAKVER-ADEYEPPVQES 227
>gi|227204363|dbj|BAH57033.1| AT4G34670 [Arabidopsis thaliana]
Length = 129
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/128 (82%), Positives = 113/128 (88%), Gaps = 1/128 (0%)
Query: 115 LRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIG 174
+R+FCI FTKR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLK LV KFI E IG
Sbjct: 2 MRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIG 61
Query: 175 REIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPIPE 233
REIEKAT IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ EDVGVKVDRPADE + E
Sbjct: 62 REIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVE 121
Query: 234 APTEVIGA 241
PTE+IGA
Sbjct: 122 EPTEIIGA 129
>gi|440905993|gb|ELR56309.1| hypothetical protein M91_13443 [Bos grunniens mutus]
Length = 173
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 124/152 (81%), Gaps = 1/152 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKI S+GLK RVFEVSL DL N+E A
Sbjct: 22 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKITSDGLKGRVFEVSLADLQNDEV-A 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L EDVQGKN LTNF GM T DK+ S+V+ W T+IEA+V+VKTTD + LRLFC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKIWQTMIEAHVNVKTTDGYLLRLFCV 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIM 152
GFTK+ NQ+++T YAQ Q+RQIR+KM EIM
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 172
>gi|167381148|ref|XP_001735594.1| 40S ribosomal protein S3A [Entamoeba dispar SAW760]
gi|167383325|ref|XP_001736489.1| 40S ribosomal protein S3A [Entamoeba dispar SAW760]
gi|167387628|ref|XP_001738239.1| 40S ribosomal protein S3A [Entamoeba dispar SAW760]
gi|165898625|gb|EDR25442.1| 40S ribosomal protein S3A, putative [Entamoeba dispar SAW760]
gi|165901099|gb|EDR27259.1| 40S ribosomal protein S3A, putative [Entamoeba dispar SAW760]
gi|165902357|gb|EDR28210.1| 40S ribosomal protein S3A, putative [Entamoeba dispar SAW760]
Length = 256
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 155/241 (64%), Gaps = 7/241 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P ++ R VG+ +V +T GT+IASE LK RV EV+L DL+ E+
Sbjct: 23 AEPFSKKEWYNVKVPKNYKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ + EDV GK+ L F G+ TTDKLRS+V+KW TLIE VDVKTTD +R+FCI
Sbjct: 83 AYNYKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCI 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R NQ+K+T YA+++QI++IR+ M ++ +AAS +L V+ + +EI
Sbjct: 143 GFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLRENKLPKEIVAK 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
S ++ + NV+IRKVKILKA K D KL++ H D S V P+ E EV+
Sbjct: 203 CSKVFSMDNVYIRKVKILKAGKIDSLKLLDQHQDNSAPVEA-------APVAEEKGEVVE 255
Query: 241 A 241
A
Sbjct: 256 A 256
>gi|167383865|ref|XP_001736709.1| 40S ribosomal protein S3A [Entamoeba dispar SAW760]
gi|165900747|gb|EDR26987.1| 40S ribosomal protein S3A, putative [Entamoeba dispar SAW760]
Length = 256
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 155/241 (64%), Gaps = 7/241 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P ++ R VG+ +V +T GT+IASE LK RV EV+L DL+ E+
Sbjct: 23 AEPFSKKEWYNVKVPKNYKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ + EDV GK+ L F G+ TTDKLRS+V+KW TLIE VDVKTTD +R+FCI
Sbjct: 83 AYNYKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCI 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R NQ+K+T YA+++QI++IR+ M ++ +AAS +L V+ + +EI
Sbjct: 143 GFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLRENKLPKEIVAK 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIG 240
S ++ + NV+IRKVKILKA K D KL++ H D S V P+ E EV+
Sbjct: 203 CSKVFSMDNVYIRKVKILKAGKIDSLKLLDQHQDNSAPVEA-------APVTEEKGEVVE 255
Query: 241 A 241
A
Sbjct: 256 A 256
>gi|67464805|ref|XP_648594.1| 40S ribosomal protein S3a [Entamoeba histolytica HM-1:IMSS]
gi|56464799|gb|EAL43208.1| 40S ribosomal protein S3a, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449703293|gb|EMD43771.1| 40S ribosomal protein S3a [Entamoeba histolytica KU27]
Length = 256
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 148/219 (67%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P F+ R VG+ +V +T GT+IASE LK RV EV+L DL+ E+
Sbjct: 23 AEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ + EDV GK+ L F G+ TTDKLRS+V+KW TLIE VDVKTTD +R+FCI
Sbjct: 83 AYNYKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCI 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R NQ+K+T YA+++QI++IR+ M ++ +AAS +L V+ + +EI
Sbjct: 143 GFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLRENKLPKEIVAK 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
S ++ + NV+IRKVKILKA K D KL++ H D S V
Sbjct: 203 CSKVFSMDNVYIRKVKILKAGKIDSLKLLDQHQDTSAPV 241
>gi|238610635|ref|XP_002397772.1| hypothetical protein MPER_01744 [Moniliophthora perniciosa FA553]
gi|215472935|gb|EEB98702.1| hypothetical protein MPER_01744 [Moniliophthora perniciosa FA553]
Length = 154
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 124/148 (83%)
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P QV++T YAQ+SQIR
Sbjct: 1 MDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQIR 60
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
+IR+KM EIM +A++CDLK LV+KF+ E IGREIEKA+ SIYPLQNV++RK KILKAPK
Sbjct: 61 EIRKKMFEIMTREASNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPK 120
Query: 203 FDLGKLMEVHGDYSEDVGVKVDRPADEP 230
+D+ KLME+HG+ +++ G ++ + EP
Sbjct: 121 YDVSKLMELHGETTDETGTRIAKDFKEP 148
>gi|444710987|gb|ELW51946.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 213
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 128/163 (78%), Gaps = 3/163 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N++ A+
Sbjct: 23 DSFSKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDKV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+RS+V+KW T+IEA+V+V+TTD + LRLFC G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMRSMVKKWQTMIEAHVNVRTTDGYLLRLFCAG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSL 164
FTK+ NQ+ +T YAQ Q+RQI +KM EIM + C LK L
Sbjct: 142 FTKKRNNQIWKTSYAQYQQVRQIWKKMMEIMTREL--CSLKLL 182
>gi|440292604|gb|ELP85791.1| 40S ribosomal protein S3A, putative [Entamoeba invadens IP1]
Length = 265
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 147/219 (67%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P F+ RNVG+ +V +T GTK+AS+ L+ RV EV+L DL+ E++
Sbjct: 23 AEPFSKKEWYNVKVPKNFKRRNVGQIVVNKTTGTKVASDQLRGRVVEVNLADLMESEKYG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ R EDV GK+ L F + TTDKLRS+V+KW TLIE VDVKTTD T+R+FCI
Sbjct: 83 AYNYKFRCEDVNGKDCLMVFHSLKLTTDKLRSIVKKWCTLIETSVDVKTTDGNTIRVFCI 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R P+Q+K+T YA+ Q + IR+ M I+ QA + DL V+ + + I +
Sbjct: 143 GFTTRKPSQIKKTSYAKKGQAKLIRKIMGAIITKQAINKDLPQFVDFLREPTLTQTIIQR 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
I+P+ NV+IRKVKILK+ K D KL+E H D +E V
Sbjct: 203 AEKIFPIDNVYIRKVKILKSGKIDSLKLLEQHQDANEVV 241
>gi|440302938|gb|ELP95244.1| 40S ribosomal protein S3A, putative [Entamoeba invadens IP1]
Length = 265
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 147/219 (67%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P F+ RNVG+ +V +T GTK+AS+ L+ RV EV+L DL+ E++
Sbjct: 23 AEPFSKKEWYNVKVPKNFKRRNVGQIVVNKTTGTKVASDQLRGRVVEVNLADLMESEKYG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ R EDV GK+ L F + TTDKLRS+V+KW TLIE VDVKTTD T+R+FCI
Sbjct: 83 AYNYKFRCEDVNGKDCLMVFHSLKLTTDKLRSIVKKWCTLIETSVDVKTTDGNTIRVFCI 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R P+Q+K+T YA+ Q + IR+ M I+ QA + DL V+ + + I +
Sbjct: 143 GFTTRKPSQIKKTSYAKKGQAKLIRKIMGAIITKQAINKDLPQFVDFLREPTLTQTIIQR 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
I+P+ NV+IRKVKILK+ K D KL+E H D +E V
Sbjct: 203 AEKIFPIDNVYIRKVKILKSGKIDSLKLLEQHQDANEVV 241
>gi|444709076|gb|ELW50108.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 185
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 126/164 (76%), Gaps = 1/164 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKI S+ LK VFEVSL DL N+E A
Sbjct: 22 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKITSDSLKGHVFEVSLTDLQNDEV-A 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
++K +L E VQGKN LTNF GM T K+ S+V+KW T+IEA+VD KTTD + LRLFC+
Sbjct: 81 FKKFKLITEAVQGKNCLTNFHGMDLTHHKMCSMVKKWQTMIEAHVDGKTTDGYLLRLFCV 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSL 164
GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEV 184
>gi|70926923|ref|XP_735925.1| 40S ribosomal protein S3A [Plasmodium chabaudi chabaudi]
gi|56510021|emb|CAH82057.1| 40S ribosomal protein S3A, putative [Plasmodium chabaudi chabaudi]
Length = 201
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 139/193 (72%), Gaps = 5/193 (2%)
Query: 42 KHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLI 101
K R++EV+L DL N+E+ A++KI+L + + ++ T+F G+S T DKL SL+RK +TLI
Sbjct: 1 KGRIYEVNLADLNNDEDQAHKKIKLICDHIVNRDCYTDFCGLSITRDKLCSLIRKGYTLI 60
Query: 102 EAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDL 161
E DVKT DN+ LR+FCI FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ L
Sbjct: 61 EGCTDVKTIDNYHLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAEASKVLL 120
Query: 162 KSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV 221
K LV+K I E IG+E+EK I+PLQNV IRKVKILK PK D+ KLME+H D +D G
Sbjct: 121 KDLVKKIIPESIGKEVEKQCKKIFPLQNVLIRKVKILKRPKLDISKLMELHTDPKDDSGK 180
Query: 222 KVDRPADEPIPEA 234
V + +PE+
Sbjct: 181 NV-----KSLPES 188
>gi|301755330|ref|XP_002913529.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3a-like
[Ailuropoda melanoleuca]
Length = 242
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 149/236 (63%), Gaps = 26/236 (11%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DP +KKDWYD+KAP+ F + N+GKTL+TRTQGTKIAS+GLK VFEV+L DL N + A
Sbjct: 21 SDPISKKDWYDVKAPAMFNIINIGKTLMTRTQGTKIASDGLKGIVFEVNLADLQN--KIA 78
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
RK++L ED+QGKN LT F GM DK+ S+++ W +IE +V VKTT+ + L L CI
Sbjct: 79 CRKLKLITEDIQGKNCLTYFHGMDLICDKMCSIIKIWXAMIEVHVTVKTTEGYLLHLLCI 138
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK NQ+ + Y + DLK++ K I + IG++IE
Sbjct: 139 GFTKNCNNQIWNSSYT----------------YLEVPINDLKAVANKLIPDSIGKDIENV 182
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPADE 229
IYPL +F+RKV+++K PKF+LGKL E HGD S + G KV++ ADE
Sbjct: 183 CQYIYPLHGIFVRKVQMMKRPKFELGKLREFHGDSSSLEKTTENEAGAKVEQ-ADE 237
>gi|403332112|gb|EJY65048.1| 40S ribosomal protein S3a [Oxytricha trifallax]
Length = 276
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 150/232 (64%), Gaps = 18/232 (7%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGT-----------------KIASEGLKHRVF 46
FAKK+WY+I P+ F R T RT G + AS+ LK RVF
Sbjct: 23 FAKKEWYNIHVPTVFDTRVPTITPCNRTAGQSKSSLSQTSVLTMFVCIEHASDSLKGRVF 82
Query: 47 EVSLGDLLNE-EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYV 105
E+SL DL E + A+RK++++ E+V+G + TNF+GM T DKL ++V+KWHT +EA+V
Sbjct: 83 EISLADLNRESNDQAWRKMKVQIEEVKGFDCYTNFYGMDITRDKLCTIVKKWHTTVEAFV 142
Query: 106 DVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLV 165
KT D + LR+F IGFT+R QV TCYA+ SQ + IR+KM EIM+ +A LK L
Sbjct: 143 QTKTADGYLLRMFAIGFTQRTRKQVSATCYAKGSQRKLIRKKMMEIMINEAQKSTLKELT 202
Query: 166 EKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE 217
+KF+++ IG+EI+K I+PLQNV +RKVK+LK PKFDL KLME++ + E
Sbjct: 203 KKFVSDTIGKEIQKQCGKIFPLQNVLVRKVKLLKKPKFDLTKLMELYQEKPE 254
>gi|440290180|gb|ELP83620.1| 40S ribosomal protein S3A, putative [Entamoeba invadens IP1]
Length = 265
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 146/219 (66%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P F+ RNVG+ +V +T GTK+AS+ L+ RV EV+L DL+ E+
Sbjct: 23 AEPFSKKEWYNVKVPKNFKRRNVGQIVVNKTTGTKVASDQLRGRVVEVNLADLMESEKFG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ R EDV GK+ L F + TTDKLRS+V+KW TLIE VDVKTTD T+R+FCI
Sbjct: 83 AYNYKFRCEDVNGKDCLMVFHSLKLTTDKLRSIVKKWCTLIETSVDVKTTDGNTIRVFCI 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFT R P+Q+K+T YA+ Q + IR+ M I+ QA + DL V+ + + I +
Sbjct: 143 GFTTRKPSQIKKTSYAKKGQAKLIRKIMGAIITKQAINKDLPQFVDFLREPTLTQTIIQR 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
I+P+ NV+IRKVKILK+ K D KL+E H D +E V
Sbjct: 203 AEKIFPIDNVYIRKVKILKSGKIDSLKLLEQHQDANEVV 241
>gi|444732185|gb|ELW72492.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 225
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 140/213 (65%), Gaps = 27/213 (12%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +R +SL DL N++ A+
Sbjct: 23 DPFSKKDWYDMKAPAMFNLR--------------------------MSLADLQNDKV-AF 55
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+ +VKTTD + L LFC+G
Sbjct: 56 RKFKLITEDVQGKNCLTNFHGMDLTHDKMCSMVKKWQTMIEAHFNVKTTDGYLLSLFCVG 115
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++ YAQ Q QI++KM EIM + + DLK +V K I + IG++I+KA
Sbjct: 116 FTKKCNNQIRKISYAQHQQFYQIQKKMMEIMTQEVQTNDLKEVVNKQIPDSIGKDIKKAC 175
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
S YPL ++FIRKVK+LK PKF+ G LME+ G+
Sbjct: 176 QSTYPLSDIFIRKVKMLKKPKFEFGNLMELRGE 208
>gi|226472684|emb|CAX71028.1| ribosomal protein S3A [Schistosoma japonicum]
Length = 222
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 143/210 (68%), Gaps = 1/210 (0%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F R +TLVTRTQGT+IASE LK RV +SLGDL + E +RK +L+ EDVQG++ L
Sbjct: 2 FPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEVFRKFKLQIEDVQGRHCL 61
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I FT +P + YAQ
Sbjct: 62 TNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFIITFTPSVPRSERLHSYAQ 121
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
T++I++IR ++ EI+ + ++CDLK +V K I + I ++ KA S IYPL FIRKVK+
Sbjct: 122 TTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKAASWIYPLGETFIRKVKV 181
Query: 198 LKAPKFDLGKLMEVHGDY-SEDVGVKVDRP 226
LK PK DL +LME+HG+ S G V RP
Sbjct: 182 LKRPKADLARLMELHGESKSTAPGETVSRP 211
>gi|290562641|gb|ADD38716.1| 40S ribosomal protein S3a [Lepeophtheirus salmonis]
Length = 253
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 149/229 (65%), Gaps = 3/229 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KK+WY+IKAPS F +TLVTRTQGTKIASEGLK RV +SLGDL NE +
Sbjct: 22 DPFTKKEWYEIKAPSMFEKSTCARTLVTRTQGTKIASEGLKKRVVRLSLGDLKNESSEPF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK L+ E VQGK+ TNF M T DKL S+++K + IE VD KTTD + LR+F I
Sbjct: 82 RKFGLQIESVQGKHCYTNFHSMEITRDKLCSMIKKKQSTIEIRVDAKTTDGYKLRIFIIA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT + P + YA+TS I+++R+K+ E + A+ +SCDL +V+K I + IG + +KA
Sbjct: 142 FTIK-PKEGH--MYAKTSGIKRMRKKIIERVSAEVSSCDLPGIVKKLIPDSIGEDAKKAG 198
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
S Y L +RKVKIL+ PK D+ KLM ++G+ + G V + EP
Sbjct: 199 SQFYHLGTAMVRKVKILRRPKLDVTKLMNMYGETTTADGETVIQDHYEP 247
>gi|109090074|ref|XP_001091936.1| PREDICTED: 40S ribosomal protein S3a-like [Macaca mulatta]
Length = 262
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 128/168 (76%), Gaps = 2/168 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWY++KA + F +RN+GKTLVTRTQGTKIAS+ LK VFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYNVKAAAMFNIRNIGKTLVTRTQGTKIASDSLKGCVFEVSLADLQNDE-FAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LT F GM DK+ S+V+KW T+IEA++DVKTT + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTKFHGMDLIRDKMCSMVKKWQTMIEAHIDVKTTHGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFI 169
FTK+ NQ+++T YAQ Q+RQI +KM EIM + + DLK +V K I
Sbjct: 142 FTKKRNNQIRKTSYAQHQQVRQI-QKMMEIMTQEVPTNDLKEMVNKLI 188
>gi|379072422|gb|AFC92843.1| ribosomal protein S3A, partial [Hymenochirus curtipes]
Length = 182
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 132/182 (72%), Gaps = 9/182 (4%)
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 1 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 60
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 61 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 120
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK PKF+LGKLME HG+ ++ G KV+R + P+
Sbjct: 121 QSIYPLHDVFVRKVKMLKKPKFELGKLMEXHGEGGATGKPAGDETGAKVERADGYEPPVQ 180
Query: 233 EA 234
E+
Sbjct: 181 ES 182
>gi|379072418|gb|AFC92841.1| ribosomal protein S3A, partial [Pipa carvalhoi]
Length = 182
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 133/182 (73%), Gaps = 9/182 (4%)
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 1 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 60
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 61 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 120
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 121 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDETGAKVERADGYEPPVQ 180
Query: 233 EA 234
E+
Sbjct: 181 ES 182
>gi|444729484|gb|ELW69898.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 194
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF++KDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N++ A+
Sbjct: 23 DPFSEKDWYDMKAPARFDIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDKV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L AE VQGK+ LT+F G+ T DK+ S+V+KW T+IEA+VDV+TTD + L FC+G
Sbjct: 82 RKFKLIAEHVQGKHCLTSFHGLDLTRDKMCSMVKKWQTMIEAHVDVRTTDGYLLCRFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIG 174
FTK NQ+++T YA Q+RQI +KM E M + + DLK +V K I + G
Sbjct: 142 FTKTRNNQIQKTSYAHHQQVRQIWKKMMEFMTREVQTNDLKEVVNKLIPDSTG 194
>gi|410962911|ref|XP_003988012.1| PREDICTED: tandem C2 domains nuclear protein [Felis catus]
Length = 732
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 137/215 (63%), Gaps = 37/215 (17%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKD YD+KAP+ F +RN+GKTLV RTQG+KI S+GLK RVFEVSL DL N+E A+
Sbjct: 352 DPFSKKDRYDVKAPAMFNIRNIGKTLVMRTQGSKITSDGLKGRVFEVSLADLQNDEV-AF 410
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF G T DK+ S+VRK
Sbjct: 411 RKFKLITEDVQGKNCLTNFHGTDLTWDKMCSMVRK------------------------- 445
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T YAQ Q RQIR+KM EIM + + DLK +V K I + I ++IEKA
Sbjct: 446 -----------TSYAQYQQARQIRKKMMEIMTRELQTSDLKQVVNKLIPDSIRKDIEKAC 494
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
SIYPL +VFIRKVK+LK PK +LGKLME+HG+ S
Sbjct: 495 QSIYPLPDVFIRKVKMLKKPKLELGKLMELHGEGS 529
>gi|351706964|gb|EHB09883.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 229
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 148/242 (61%), Gaps = 45/242 (18%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F+KKDWYD+KA + +RN+GKTLVTRTQGTKIA++GLK VF+VSL DL N+E A+
Sbjct: 23 DQFSKKDWYDVKALAMLNIRNIGKTLVTRTQGTKIATDGLKGHVFQVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ +V+KW T+IE +V
Sbjct: 82 RKFKLIIEDVQGKNCLTNFHGMDLTHDKMCFMVKKWQTMIETHV---------------- 125
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+RQIR+KM EIM + + DLK +V K + G+ IEKA
Sbjct: 126 -------------------VRQIRKKMMEIMTREVQTNDLKEVVNKLNPDSTGKNIEKAC 166
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIP 232
S+YPL +VF+RKVK+LK PK +LGKLME+HG+ S ++ G K +R + P+
Sbjct: 167 QSLYPLHDVFVRKVKMLKQPKSELGKLMELHGEGSSSGRATGDETGAKAERADGYEPPVQ 226
Query: 233 EA 234
E+
Sbjct: 227 ES 228
>gi|379072420|gb|AFC92842.1| ribosomal protein S3A, partial [Rhinophrynus dorsalis]
Length = 182
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 132/182 (72%), Gaps = 9/182 (4%)
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+I A+VDVKTTD + LRLFC+G
Sbjct: 1 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIXAHVDVKTTDGYLLRLFCVG 60
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA
Sbjct: 61 FTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAC 120
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIP 232
SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+
Sbjct: 121 QSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGYEPPVQ 180
Query: 233 EA 234
E+
Sbjct: 181 ES 182
>gi|405958431|gb|EKC24560.1| 40S ribosomal protein S3a [Crassostrea gigas]
Length = 176
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 124/164 (75%), Gaps = 5/164 (3%)
Query: 68 AEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLP 127
AE+VQG+NVLTNF GM T DKL S+V+KW T+I+A+VDVKTTD + LR+FCIGFTK+
Sbjct: 2 AEEVQGRNVLTNFHGMDLTRDKLCSMVKKWQTMIQAHVDVKTTDGYLLRMFCIGFTKKKQ 61
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
QVK+TCYAQT+QI+ IRRKM +I+ + S D+K +V K I + IG++IEKA IYPL
Sbjct: 62 FQVKKTCYAQTTQIKTIRRKMVDIITKEVTSNDMKEVVNKLIPDSIGKDIEKACQGIYPL 121
Query: 188 QNVFIRKVKILKAPKFDLGKLMEVHGDYSE-----DVGVKVDRP 226
+VFIRKVK+LK PKFD+GKLME+HG+ D G V RP
Sbjct: 122 HDVFIRKVKVLKKPKFDIGKLMEMHGEGGSKTVITDSGETVARP 165
>gi|351712045|gb|EHB14964.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 222
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 144/231 (62%), Gaps = 46/231 (19%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTL+TRTQGTKIAS+GLK VFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLLTRTQGTKIASDGLKGHVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LT+ +S T
Sbjct: 82 RKFKLITEDVQGKNCLTSMVWISPVTKN-------------------------------- 109
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
NQ+++T YAQ Q+RQI +KM EIM + + DLK +V K I + G++IEKA
Sbjct: 110 ------NQIQKTSYAQHQQVRQIWKKMMEIMTREVQTNDLKEVVNKLIPDSTGKDIEKAC 163
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
S+YP+ +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G +V+R
Sbjct: 164 QSVYPVHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGARVER 214
>gi|28189785|dbj|BAC56507.1| similar to ribosomal protein S3a [Bos taurus]
Length = 159
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 114/136 (83%), Gaps = 1/136 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQ 137
FTK+ NQ+++T YAQ
Sbjct: 142 FTKKRNNQIRKTSYAQ 157
>gi|24638499|ref|NP_726518.1| ribosomal protein S3A, isoform B [Drosophila melanogaster]
gi|22759421|gb|AAN06541.1| ribosomal protein S3A, isoform B [Drosophila melanogaster]
Length = 218
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 12/203 (5%)
Query: 44 RVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLI 101
RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLI
Sbjct: 15 RVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLI 74
Query: 102 EAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDL 161
EA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DL
Sbjct: 75 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 134
Query: 162 KSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----- 216
K LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD
Sbjct: 135 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVE 194
Query: 217 ---EDVGVKVDRPA--DEPIPEA 234
G +DRP + P+ EA
Sbjct: 195 AVVSSEGAVIDRPEGYEPPVQEA 217
>gi|426365381|ref|XP_004049753.1| PREDICTED: 40S ribosomal protein S3a-like [Gorilla gorilla gorilla]
Length = 179
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKSRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + L LFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLHLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQ 140
FTK+ NQ+++T YAQ Q
Sbjct: 142 FTKKRNNQIRKTFYAQHQQ 160
>gi|444719782|gb|ELW60573.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 187
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKI S LK RVFEVSL DL ++E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIMSNDLKGRVFEVSLADL-QKDEVAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V K + EA+V+VKTT + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTHDKMCSMVEKCQPMTEAHVNVKTTRGYLLRLFCVG 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVE 166
F K+ NQ+++T YAQ Q+ QI +KM EIM + + DLK +V
Sbjct: 142 FAKKHNNQIRKTSYAQHQQVHQIWKKMMEIMTQEVQTNDLKEVVN 186
>gi|17945018|gb|AAL48571.1| RE04220p [Drosophila melanogaster]
Length = 217
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 137/195 (70%), Gaps = 3/195 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLIEA V+ KT D + LR+FC
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFC 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
IGFT + ++TCYAQ SQ+R+IR +M +I+ + + DLK L+ + + + +K
Sbjct: 143 IGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLLTSWPWTRLRKISKK 202
Query: 180 ATSS-IYPLQNVFIR 193
A S+ I+ + F++
Sbjct: 203 AVSAYIHYMMFTFVK 217
>gi|358356438|gb|AEU08331.1| FI17122p1 [Drosophila melanogaster]
Length = 247
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 12/203 (5%)
Query: 44 RVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLI 101
RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLI
Sbjct: 44 RVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLI 103
Query: 102 EAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDL 161
EA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DL
Sbjct: 104 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 163
Query: 162 KSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----- 216
K LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD
Sbjct: 164 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVE 223
Query: 217 ---EDVGVKVDRPA--DEPIPEA 234
G +DRP + P+ EA
Sbjct: 224 AVVSSEGAVIDRPEGYEPPVQEA 246
>gi|444728160|gb|ELW68624.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 232
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 145/231 (62%), Gaps = 40/231 (17%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +R++GKTL+TRTQG KIAS GLK FEVSL D L ++E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRSIGKTLITRTQGAKIASGGLKGCAFEVSLAD-LQKDEVAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R+ +L EDVQGKN LT+F G+ T DK+ S+V+K T+IEA+V VKT D +
Sbjct: 82 REFKLITEDVQGKNCLTSFHGLDLTHDKMCSMVKKRQTMIEAHVGVKTNDGY-------- 133
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
LP + EIM + + D K +V+K I G++IEKA
Sbjct: 134 ----LP--------------------LMEIMTREVQTSDSKEVVDKLIPGSPGKDIEKAC 169
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
S+YPL +VF+RK K+LK P F+LGKLME+HG+ S ++ G KV+R
Sbjct: 170 QSLYPLHDVFVRKAKMLKKPTFELGKLMELHGEGSSSGKATGDETGAKVER 220
>gi|313569894|gb|ADR66775.1| RE22282p [Drosophila melanogaster]
Length = 247
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 12/203 (5%)
Query: 44 RVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLI 101
RVFEVSL DL + E ++RK RL AEDVQ +NVL NF GM TTDK RS+V+KW TLI
Sbjct: 44 RVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLI 103
Query: 102 EAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDL 161
EA V+ KT D + LR+FCIGFT + ++TCYAQ SQ+R+IR +M +I+ + + DL
Sbjct: 104 EAIVEAKTVDGYLLRVFCIGFTAKDQQCQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 163
Query: 162 KSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----- 216
K LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD
Sbjct: 164 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVE 223
Query: 217 ---EDVGVKVDRPA--DEPIPEA 234
G +DRP + P+ EA
Sbjct: 224 AVVSSEGAVIDRPEGYEPPVQEA 246
>gi|444726682|gb|ELW67204.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 232
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 145/241 (60%), Gaps = 46/241 (19%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKD D+KAP+ F +RN GKTLVTRTQGTKIAS+GLK RVFEVSL D L ++ A+
Sbjct: 27 DPFSKKDGNDMKAPAMFNIRNTGKTLVTRTQGTKIASDGLKGRVFEVSLVD-LQHDKVAF 85
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF G+ T DK+ ++RK
Sbjct: 86 RKFKLITEDVQGKNCLTNFHGLDLTRDKMCPMIRK------------------------- 120
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T YAQ + QI++K+ EIM+ + DLK + K I E IG++IEKA+
Sbjct: 121 -----------TFYAQHQLVHQIQKKIMEIMIREVEMSDLKKMANKLIPESIGKDIEKAS 169
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRP--ADEPIP 232
SIYPL +VF+RKVK+LK KF+LGKL E+HG S ++ G KV+R + P+
Sbjct: 170 QSIYPLHDVFVRKVKMLKKAKFELGKLTELHGAGSSSGKATGDETGAKVERADGCEPPVQ 229
Query: 233 E 233
E
Sbjct: 230 E 230
>gi|317037111|ref|XP_001398470.2| ribosomal protein S3a [Aspergillus niger CBS 513.88]
Length = 140
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 109/134 (81%)
Query: 73 GKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 132
GKN LTNF G+ FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I FTKR PNQ+K+
Sbjct: 4 GKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKK 63
Query: 133 TCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFI 192
T YA++SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT IYPLQNV I
Sbjct: 64 TTYARSSQIRAIRKKMTEIMQREAASCSLAQLTTKLIPEVIGREIEKATQGIYPLQNVHI 123
Query: 193 RKVKILKAPKFDLG 206
RKVK+LK+PKFDLG
Sbjct: 124 RKVKLLKSPKFDLG 137
>gi|146165293|ref|XP_001014743.2| Ribosomal S3Ae family protein [Tetrahymena thermophila]
gi|269969633|sp|Q23DE3.2|RS3A_TETTS RecName: Full=40S ribosomal protein S3a
gi|319443350|pdb|2XZM|4 Chain 4, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443385|pdb|2XZN|4 Chain 4, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|146145528|gb|EAR94608.2| Ribosomal S3Ae family protein [Tetrahymena thermophila SB210]
gi|315570291|tpg|DAA33964.1| TPA_exp: 40S ribosomal protein rpS1e [Tetrahymena thermophila]
Length = 265
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 142/215 (66%), Gaps = 4/215 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEHA 60
DP ++K+WYD +AP F ++ GKTLVT++ G +IASE +K RV E +L DL N + A
Sbjct: 24 DPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLKDNSNDKA 83
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++L ++V G+N T+F+G+ T D+L S++RKW TLIEA VD KT D + +R+F +
Sbjct: 84 WRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTL 143
Query: 121 GFTKRLP---NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
FTK+ TCYA++SQ+R IRRK+ + +AA + + I E ++I
Sbjct: 144 AFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKI 203
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
EK T +I+PLQN+ IRKVK+LK PK D K+ E++
Sbjct: 204 EKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
>gi|211907083|gb|ACJ12076.1| ribosomal protein S3a [Bombina orientalis]
Length = 173
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 126/172 (73%), Gaps = 9/172 (5%)
Query: 72 QGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVK 131
QGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ++
Sbjct: 1 QGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIR 60
Query: 132 RTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
+T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V+
Sbjct: 61 KTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVY 120
Query: 192 IRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDRP--ADEPIPEA 234
+RKVK+LK PKF+LGKLME+HG+ ++ G KV+R + P+ E+
Sbjct: 121 VRKVKMLKKPKFELGKLMELHGEGGGTGKPTGDETGAKVERADGYEPPVQES 172
>gi|444723745|gb|ELW64381.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 213
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 139/230 (60%), Gaps = 59/230 (25%)
Query: 3 PFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYR 62
PF+KKDWYD+ AP+ F +RN+GK LVTRTQGTKIAS+ LK RVFE+
Sbjct: 24 PFSKKDWYDVTAPAMFNIRNIGKILVTRTQGTKIASDCLKGRVFEI-------------- 69
Query: 63 KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGF 122
+IEA+VDVKTTD + L LFC+GF
Sbjct: 70 -------------------------------------MIEAHVDVKTTDGYLLCLFCVGF 92
Query: 123 TKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
TK+ NQ+++T YAQ Q+ QI +KM EIM + + DLK +V+K I++ IG++IEKA
Sbjct: 93 TKKCNNQIQKTFYAQLQQVHQI-QKMMEIMTREVQTNDLKEVVDKLISDSIGKDIEKACQ 151
Query: 183 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------DVGVKVDR 225
SIYPL +VF+RKVK+ K PKF+LGKLME+HG+ S ++G KV+R
Sbjct: 152 SIYPLHHVFVRKVKMPKKPKFELGKLMELHGEGSSSGKATGVEMGTKVER 201
>gi|402579303|gb|EJW73255.1| 40S ribosomal protein S3a [Wuchereria bancrofti]
Length = 177
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 124/172 (72%), Gaps = 3/172 (1%)
Query: 64 IRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFT 123
+RL EDVQG+ LTNF GM T DKL S+V+KWHTLIEA V VKT+D + LRLFCIGFT
Sbjct: 1 MRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIGFT 60
Query: 124 KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS 183
K+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + IG++IEKA S
Sbjct: 61 KKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSY 120
Query: 184 IYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPIP 232
IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K++RP D P
Sbjct: 121 IYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 172
>gi|351720384|emb|CCD22031.1| 40S ribosomal protein S3A [Cupiennius salei]
Length = 149
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/128 (73%), Positives = 106/128 (82%), Gaps = 1/128 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KDWYD+KAP F VRNVGKTLV RTQGTKIASEGLK RVFE+SL DL N+E A+
Sbjct: 23 DPFTRKDWYDVKAPVMFSVRNVGKTLVNRTQGTKIASEGLKGRVFEISLADLQNDE-IAF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FCIG
Sbjct: 82 RKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRMFCIG 141
Query: 122 FTKRLPNQ 129
FTK+ Q
Sbjct: 142 FTKKWTTQ 149
>gi|444706561|gb|ELW47898.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 156
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKI S+ LK RVFEVSL DL N+E A+
Sbjct: 17 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIVSDSLKDRVFEVSLADLQNDEV-AF 75
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L ED+QGKN LTN GM T DK+ S+++KW T+IEA+VDVKTTD + L LFC+
Sbjct: 76 RKFKLITEDIQGKNCLTNCHGMDLTCDKMCSMIKKWQTMIEAHVDVKTTDGYLLHLFCVR 135
Query: 122 FTKRLPNQVKRTCYAQTSQIR 142
FTK+ N++++T YAQ Q+R
Sbjct: 136 FTKKCNNRIRKTSYAQHQQVR 156
>gi|340503169|gb|EGR29783.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 271
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEH-A 60
DP ++K+WYD +AP F ++ GKTLVT++ G +IAS+ +K RV E +L DL + +
Sbjct: 23 DPLSRKEWYDFRAPVPFSSKSFGKTLVTKSSGNRIASDEIKGRVVESTLADLKDSSNNLH 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++L ++V+G+N T+F+G+ T DKL S++RKW TLIE+ VD KT D + +R+F I
Sbjct: 83 WRKVKLVIDEVEGRNAKTSFYGLDITRDKLCSMIRKWQTLIESRVDCKTADGYIVRVFTI 142
Query: 121 GFTKRLPNQ-VKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
FTK+ + TCYA++SQ+R IR+K+ + +AA ++ +K I++ ++EK
Sbjct: 143 AFTKKFGGKSAGSTCYAKSSQVRAIRKKINTYITNEAAKANISEFTKKLISDDYVHKMEK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
T S++PL+++ I+KVK+LK PK D K E++
Sbjct: 203 DTKSVFPLRDITIKKVKVLKRPKLDAAKFAELY 235
>gi|432093076|gb|ELK25366.1| 40S ribosomal protein S3a [Myotis davidii]
Length = 177
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 108/129 (83%), Gaps = 1/129 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 50 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 108
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 109 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 168
Query: 122 FTKRLPNQV 130
FTK+ NQ+
Sbjct: 169 FTKKRNNQI 177
>gi|401715286|gb|AFP99279.1| ribosomal protein S3A, partial [Lutzomyia intermedia]
Length = 193
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 124/176 (70%), Gaps = 8/176 (4%)
Query: 58 EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
+H R RL AE+VQG NVLTNF GM TTDKLRS+V+KW TLIEA +DV+TTD + LR+
Sbjct: 8 DHTAR-FRLIAEEVQGNNVLTNFHGMDLTTDKLRSMVKKWQTLIEANIDVRTTDGYVLRV 66
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
FCIGFT + ++TCYAQ SQ++ IR+KM +I+ ++CDLK +V K + + I ++I
Sbjct: 67 FCIGFTSKDSLSQRKTCYAQHSQVKAIRKKMCDIITRDVSTCDLKEVVNKLLPDSIAKDI 126
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV-------GVKVDRP 226
EK+ IYPL +V+IRKVK+LK +FDL KL+E+HGD G KVDRP
Sbjct: 127 EKSCQGIYPLHDVYIRKVKVLKKIRFDLSKLLELHGDGGGKGTEGAVAEGAKVDRP 182
>gi|355746161|gb|EHH50786.1| hypothetical protein EGM_01663 [Macaca fascicularis]
Length = 171
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKD YD+KAP+ F +RN+G+TL+TRTQGTKI S+GLK +FEVS DL N+E
Sbjct: 22 VDPFSKKDCYDVKAPAMFNIRNIGRTLITRTQGTKIISDGLKGHMFEVSQADLQNDEV-V 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK ++ EDVQGKN LTNF+GM T DK+ S+V+KW T+IE +VDVKT D + LFC+
Sbjct: 81 FRKFKMITEDVQGKNCLTNFYGMDLTHDKMCSMVKKWQTMIETHVDVKTNDGYLFNLFCV 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKM 148
GFTK+ NQ+++T Y Q Q+RQI +K+
Sbjct: 141 GFTKKYNNQIRKTSYIQHQQLRQIPKKI 168
>gi|60687660|gb|AAX30163.1| SJCHGC01276 protein [Schistosoma japonicum]
Length = 189
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 121/168 (72%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 ADPFSKKEWYDIKAPAMFPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEV 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQIEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKF 168
FT +P + YAQT++I++IR ++ EI+ + ++CDLK +V K
Sbjct: 142 TFTPSVPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKL 189
>gi|226472680|emb|CAX71026.1| ribosomal protein S3A [Schistosoma japonicum]
Length = 206
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 121/168 (72%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF+KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 ADPFSKKEWYDIKAPAMFPKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEV 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQIEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKF 168
FT +P + YAQT++I++IR ++ EI+ + ++CDLK +V K
Sbjct: 142 TFTPSVPRSERLHSYAQTTRIKRIRARLVEIIQQEVSTCDLKEVVNKL 189
>gi|290997646|ref|XP_002681392.1| 40s ribosomal protein S3a [Naegleria gruberi]
gi|284095016|gb|EFC48648.1| 40s ribosomal protein S3a [Naegleria gruberi]
Length = 232
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNV---GKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE 58
DPFAKK+W+D+ AP F + KT + +T GTKI++E LK RVFE+S DLLNEEE
Sbjct: 20 DPFAKKEWFDVFAPHPFNKKKTEPFTKTPINKTAGTKISTEALKGRVFEISAADLLNEEE 79
Query: 59 HAYRKIRLRAEDVQGKN--VLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLR 116
++ IRL D + +N LT F G+ FT DKLRSLV+KWHTLI ++VKT D F +R
Sbjct: 80 QQHQLIRLAVGDAKSENKKALTVFNGLRFTVDKLRSLVKKWHTLITTRINVKTADGFQMR 139
Query: 117 LFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGRE 176
+F +G TKR Q + YA SQ+ +I +M++ + +A + + VEK + +G+E
Sbjct: 140 VFALGITKRRQLQTHKRTYAYKSQVMRITARMKDAINKKATASPVNEFVEKVVTGQLGKE 199
Query: 177 IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 210
IEK+ +SI+P+++V I K+K+ K PK DL +
Sbjct: 200 IEKSCASIFPMKDVCICKIKVTKTPK-DLASALH 232
>gi|145495099|ref|XP_001433543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400661|emb|CAK66146.1| unnamed protein product [Paramecium tetraurelia]
Length = 271
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 144/218 (66%), Gaps = 1/218 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEH-A 60
DP A+K+W+++ AP F G T + ++ GT +A+E +K RV E SL DL + + A
Sbjct: 20 DPLARKEWFELTAPVPFSAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSDQMA 79
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++L +DV+G T+F+G+ T DK+ +++K TLIE V+ +++D + LR+F I
Sbjct: 80 WRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSSDGYILRIFII 139
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK + NQ ++T YAQ SQI+ IR+K+ EI++ + + + +L+ F E++ +EI KA
Sbjct: 140 AFTKSIKNQQRKTTYAQRSQIKDIRKKISEIVLREVSKKSITTLLGFFNQEILSKEIAKA 199
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 218
T +I+PLQN+ +RKVK++K PK D KL E + D + +
Sbjct: 200 TRTIFPLQNITLRKVKLVKRPKVDAQKLREFYEDANRN 237
>gi|358336929|dbj|GAA55369.1| small subunit ribosomal protein S3Ae, partial [Clonorchis sinensis]
Length = 199
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 119/171 (69%), Gaps = 4/171 (2%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
ADPF KK+WYDIKAPS F R +TLVTRTQGTKIASE LK RV +SLGDL + E
Sbjct: 30 ADPFTKKEWYDIKAPSMFHKRTCARTLVTRTQGTKIASEALKGRVVTLSLGDLSEKNEET 89
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL SLV +W + IEA+VDVKTTD + LR F I
Sbjct: 90 FRKFKLQVEDVQGRHCLTNFHGLEITRDKLCSLVVRWRSTIEAHVDVKTTDGYHLRFFII 149
Query: 121 GFTKRLPNQVKRTC---YAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKF 168
FT P + C YAQ ++I+++R ++ EI+ + ASCDLK +V K
Sbjct: 150 SFTPN-PKSARHECRHTYAQATRIKRLRARLVEIIQQEVASCDLKEVVNKL 199
>gi|160948192|emb|CAO94697.1| putative ribosomal protein S3a [Pomphorhynchus laevis]
Length = 182
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 110/160 (68%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF KKDWYD+KAPS F RNVGKTLV RT G +IAS+ LK+RVFEVSL DL E A+
Sbjct: 23 DPFTKKDWYDVKAPSTFINRNVGKTLVNRTSGNRIASDALKNRVFEVSLSDLSQNNEDAF 82
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L E+VQG LTNF GM T D L S ++K T+IEA+ D KT+D + LRLFC+G
Sbjct: 83 RKFKLVVEEVQGNVCLTNFHGMDVTRDLLYSKIKKRFTMIEAHTDAKTSDGYLLRLFCVG 142
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDL 161
FT R +VK TCYA Q++ IR+ M +I +S +L
Sbjct: 143 FTSREERRVKATCYASHKQVKSIRKIMVDIYARDVSSSNL 182
>gi|342184084|emb|CCC93565.1| putative 40S ribosomal protein S3A [Trypanosoma congolense IL3000]
Length = 259
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEHAYRK 63
+K+WYD+ AP F VR KT+ +TQGTKIA++ L+ RV+E +L DL ++ AYRK
Sbjct: 26 RKEWYDVVAPRNFEVRQFAKTICNKTQGTKIAADYLRGRVYEGNLADLNKTQVDDDAYRK 85
Query: 64 IRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFT 123
++ ++VQG+N+LT F + T+D++ L+RKW T IEA V+ KT+D +TLRLF I FT
Sbjct: 86 VKFTVQEVQGRNLLTQFHSIDMTSDRVYYLLRKWCTTIEATVEAKTSDGYTLRLFVIAFT 145
Query: 124 KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS 183
K+ PNQ+ + CYA+T +R +R ++ I+ + ++ V ++ +EK+ +
Sbjct: 146 KKQPNQLSKNCYAKTRLVRWVRHRITNIIKRRLLKLNINEAVTLLARNILRDRLEKSCNP 205
Query: 184 IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY--SEDVGVKVDRPADEPIPEA 234
I PL+++ IRKVK ++ PKFD L+ HG S + +V A EP +A
Sbjct: 206 IVPLRDLRIRKVKTIRTPKFDAQALLAAHGKIPTSAEGVARVVEEAQEPAVDA 258
>gi|71747174|ref|XP_822642.1| 40S ribosomal protein S3a [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802194|pdb|3ZEY|0 Chain 0, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70832310|gb|EAN77814.1| 40S ribosomal protein S3a, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332409|emb|CBH15404.1| 40S ribosomal protein S3A, putative [Trypanosoma brucei gambiense
DAL972]
gi|261332410|emb|CBH15405.1| 40S ribosomal protein S3A, putative [Trypanosoma brucei gambiense
DAL972]
Length = 256
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYD+ AP F VR KT+ +TQGTKIA++ L+ RV+E +L DL E+
Sbjct: 22 EAMSRKEWYDVVAPKNFEVRQFAKTICNKTQGTKIAADFLRGRVYEGNLADLNKTQNEDD 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++ ++VQG+N+LT F GM T+D++ L+RKW T IEA V+ KT D + LRLF
Sbjct: 82 AYRKVKFTVQEVQGRNLLTQFHGMDMTSDRVYYLLRKWCTTIEATVEAKTADGYGLRLFL 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTK+ NQ+ + CYA+T ++ +R + I+ + A D+ V ++ + K
Sbjct: 142 IAFTKKQENQLSKNCYAKTRLVKWVRMRATNIIRRRLAKLDINDAVSLLTRNILRDRLAK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ I PL+++ IRKVK+++ PKFD L+ HG+
Sbjct: 202 RCNPIIPLRDLRIRKVKVIRTPKFDAQALIAAHGE 236
>gi|145499345|ref|XP_001435658.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402792|emb|CAK68261.1| unnamed protein product [Paramecium tetraurelia]
Length = 273
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 140/214 (65%), Gaps = 1/214 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEH-A 60
DP A+K+W+++ AP F G T + ++ GT +A+E +K RV E SL DL + + A
Sbjct: 20 DPLARKEWFELTAPVPFSAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSDQMA 79
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++L +DV+G T+F+G+ T DK+ +++K TLIE V+ ++ D + LR+F I
Sbjct: 80 WRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVI 139
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK + NQ ++T YAQ SQI+ IR+K+ EI++ + + + L+ F EV+ +EI KA
Sbjct: 140 AFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLREVSKKSITQLLGFFNQEVLAKEIGKA 199
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
T +I+PLQN+ +RKVK++K PK D KL E + D
Sbjct: 200 TRTIFPLQNITLRKVKLVKRPKVDAQKLREFYDD 233
>gi|145528560|ref|XP_001450074.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417674|emb|CAK82677.1| unnamed protein product [Paramecium tetraurelia]
Length = 270
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 141/214 (65%), Gaps = 1/214 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE-EEHA 60
DP A+K+W+++ AP F G T + ++ GT +A+E +K RV E SL DL + ++ A
Sbjct: 20 DPLARKEWFELTAPVPFSAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSDQMA 79
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++L +DV+G T+F+G+ T DK+ +++K TLIE V+ +++D + LR+F I
Sbjct: 80 WRKVKLVIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETSVEARSSDGYILRIFII 139
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK + NQ ++T YAQ SQI+ IR+K+ EI++ + + + L+ F E++ +EI KA
Sbjct: 140 AFTKGIKNQQRKTTYAQRSQIKDIRKKIVEIVLREVSKKSITGLLTYFNQEILSKEIGKA 199
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
T I+PLQN+ +RKVK++K PK D KL E + D
Sbjct: 200 TRGIFPLQNITLRKVKLVKRPKVDSQKLREFYDD 233
>gi|71747172|ref|XP_822641.1| 40S ribosomal protein S3a [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832309|gb|EAN77813.1| 40S ribosomal protein S3a, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 256
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYD+ AP F VR KT+ +TQGTK+A++ L+ RV+E +L DL E+
Sbjct: 22 EAMSRKEWYDVVAPKNFEVRQFAKTICNKTQGTKVAADFLRGRVYEGNLADLNKTQNEDD 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++ ++VQG+N+LT F GM T+D++ L+RKW T IEA V+ KT D + LRLF
Sbjct: 82 AYRKVKFTVQEVQGRNLLTQFHGMDMTSDRVYYLLRKWCTTIEATVEAKTADGYGLRLFL 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTK+ NQ+ + CYA+T ++ +R + I+ + A D+ V ++ + K
Sbjct: 142 IAFTKKQENQLSKNCYAKTRLVKWVRMRATNIIRRRLAKLDINDAVSLLTRNILRDRLAK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ I PL+++ IRKVK+++ PKFD L+ HG+
Sbjct: 202 RCNPIIPLRDLRIRKVKVIRTPKFDAQALIAAHGE 236
>gi|25140448|gb|AAN71759.1| 40S ribosomal protein-like protein [Ilyanassa obsoleta]
Length = 163
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 112/155 (72%), Gaps = 12/155 (7%)
Query: 84 SFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQ 143
S T DKL S+V+KW TLIEA+VDVKTTD + LR+F IGFT R NQVK+TCYA+ +Q++
Sbjct: 1 SLTRDKLCSMVKKWQTLIEAHVDVKTTDGYLLRVFSIGFTTRRSNQVKKTCYAKHAQVKA 60
Query: 144 IRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKF 203
IR+KM EI+ + SCD+K LV K I + IG++IEKAT IYPL +V+IRKVK+LK PKF
Sbjct: 61 IRKKMVEIITKEVTSCDMKELVNKLIPDAIGKDIEKATQGIYPLHDVYIRKVKVLKKPKF 120
Query: 204 DLGKLMEVHGDYSE------------DVGVKVDRP 226
D+GKLME+HG+ + G K+DRP
Sbjct: 121 DVGKLMELHGEGGSSTTTAKTFSGFGEAGEKLDRP 155
>gi|109290382|gb|ABG29406.1| ribosomal protein S3A [Culex pipiens pipiens]
Length = 156
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
Query: 31 TQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTD 88
TQGT+IAS+GLK RVFEVSL DL N+ E ++RK +L AEDV G+NVL NF GM TTD
Sbjct: 1 TQGTRIASDGLKGRVFEVSLADLQNDTDAERSFRKFKLIAEDVHGRNVLCNFHGMDLTTD 60
Query: 89 KLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKM 148
KLRS+V+KW TLIE VDVKTTDN+ LR+FCIGFT + ++TCYAQ SQI+ IR+ M
Sbjct: 61 KLRSMVKKWQTLIECSVDVKTTDNYLLRVFCIGFTIKDQVSQRKTCYAQHSQIKAIRKNM 120
Query: 149 REIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSI 184
+I+ S DLK +V K + + I ++IEKA +
Sbjct: 121 TQIITNNVTSSDLKEVVNKLLPDSIAKDIEKACQGV 156
>gi|154344431|ref|XP_001568157.1| putative 40S ribosomal protein S3A [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|154344433|ref|XP_001568158.1| putative 40S ribosomal protein S3A [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|269969583|sp|A4HM77.1|RS3A_LEIBR RecName: Full=40S ribosomal protein S3a
gi|134065494|emb|CAM43260.1| putative 40S ribosomal protein S3A [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065495|emb|CAM43261.1| putative 40S ribosomal protein S3A [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 264
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 2/220 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
+ A+K+WYD+ APS F R KT+ +TQGT+IA++ L+ RVFE +L DL EE
Sbjct: 23 ETMARKEWYDVVAPSNFEKRQFSKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK+R ++VQG+N+LT F M TTDK+ SL+RKW T +E V+V+T D +T+RLF
Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSMEMTTDKMASLLRKWCTTMETTVEVRTADGYTMRLFV 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FTK NQ R CYA+ ++ +R ++ +++ + + +K V V+ + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRVTKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
+ I PL+ + IRKV++++ PKFD L+ HG V
Sbjct: 203 RCNPIVPLREMRIRKVRVVRTPKFDAQALLNAHGTIPTSV 242
>gi|430812137|emb|CCJ30410.1| unnamed protein product [Pneumocystis jirovecii]
Length = 165
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 104/133 (78%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF +KDWYD+KAPS F RN GKTLV R+ G K A++ L+ RV EVSL DL +EEHA
Sbjct: 21 TDPFLRKDWYDLKAPSMFETRNFGKTLVNRSTGMKNANDSLRGRVIEVSLADLQKDEEHA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+L+ +VQG++ LTNF+GM T+DKLRSLVR+W TLIEA+ DVKTTD + LRLF I
Sbjct: 81 FRKIKLQIAEVQGRDCLTNFYGMLMTSDKLRSLVRRWQTLIEAHQDVKTTDGYVLRLFVI 140
Query: 121 GFTKRLPNQVKRT 133
GFTKR NQ+K+
Sbjct: 141 GFTKRRTNQIKKN 153
>gi|146100424|ref|XP_001468860.1| putative 40S ribosomal protein S3A [Leishmania infantum JPCM5]
gi|389594429|ref|XP_003722437.1| putative 40S ribosomal protein S3A [Leishmania major strain
Friedlin]
gi|389594431|ref|XP_003722438.1| putative 40S ribosomal protein S3A [Leishmania major strain
Friedlin]
gi|389594433|ref|XP_003722439.1| putative 40S ribosomal protein S3A [Leishmania major strain
Friedlin]
gi|398022943|ref|XP_003864633.1| 40S ribosomal protein S3A, putative [Leishmania donovani]
gi|398022945|ref|XP_003864634.1| 40S ribosomal protein S3A, putative [Leishmania donovani]
gi|122048170|sp|Q4FX73.1|RS3A_LEIMA RecName: Full=40S ribosomal protein S3a; AltName:
Full=LmS3a-related protein; Short=LmS3arp
gi|269969545|sp|A4IAU1.1|RS3A2_LEIIN RecName: Full=40S ribosomal protein S3a-2
gi|134073229|emb|CAM71950.1| putative 40S ribosomal protein S3A [Leishmania infantum JPCM5]
gi|322502869|emb|CBZ37951.1| 40S ribosomal protein S3A, putative [Leishmania donovani]
gi|322502870|emb|CBZ37952.1| 40S ribosomal protein S3A, putative [Leishmania donovani]
gi|323363665|emb|CBZ12670.1| putative 40S ribosomal protein S3A [Leishmania major strain
Friedlin]
gi|323363666|emb|CBZ12671.1| putative 40S ribosomal protein S3A [Leishmania major strain
Friedlin]
gi|323363667|emb|CBZ12672.1| putative 40S ribosomal protein S3A [Leishmania major strain
Friedlin]
Length = 264
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 2/220 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
+ A+K+WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL EE
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK+R ++VQG+N+LT F M TTDK+ SL+RKW T +E V+VKT D +T+RLF
Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFV 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FTK NQ R CYA+ ++ +R ++ +++ + + +K V V+ + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
+ I PL+ + IRKV++++ PKFD L+ HG V
Sbjct: 203 RCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASV 242
>gi|119625395|gb|EAX04990.1| ribosomal protein S3A, isoform CRA_c [Homo sapiens]
Length = 162
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 118/161 (73%), Gaps = 9/161 (5%)
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+R
Sbjct: 1 MDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVR 60
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
QIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PK
Sbjct: 61 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPK 120
Query: 203 FDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
F+LGKLME+HG+ S ++ G KV+R + P+ E+
Sbjct: 121 FELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQES 161
>gi|401429126|ref|XP_003879045.1| putative 40S ribosomal protein S3A [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401430376|ref|XP_003886568.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
gi|401430378|ref|XP_003886569.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322495295|emb|CBZ30598.1| putative 40S ribosomal protein S3A [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|356491613|emb|CBZ40955.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
gi|356491614|emb|CBZ40956.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 264
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 2/220 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
+ A+K+WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL EE
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK+R ++VQG+N+LT F M TTDK+ SL+RKW T +E V+VKT D +T+RLF
Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTVDGYTMRLFV 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FTK NQ R CYA+ ++ +R ++ +++ + + +K V V+ + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
+ I PL+ + IRKV++++ PKFD L+ HG V
Sbjct: 203 RCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASV 242
>gi|145499986|ref|XP_001435977.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403114|emb|CAK68580.1| unnamed protein product [Paramecium tetraurelia]
Length = 291
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 144/227 (63%), Gaps = 1/227 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE-EEHA 60
DP A+K+W+++ AP F G T + ++ GT +A+E +K RV E SL DL + ++ A
Sbjct: 20 DPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSDQMA 79
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK++L +DV+G T+F+G+ T DK+ +++K TLIE V+ ++ D + LR+F I
Sbjct: 80 WRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVI 139
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK + NQ ++T YAQ SQI+ IR+K+ EI++ + + + L+ F E + +EI KA
Sbjct: 140 AFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKA 199
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA 227
T +I+PLQN+ +RKVK++K PK D KL E + D + +V R
Sbjct: 200 TRTIFPLQNITLRKVKLVKRPKVDAQKLREFYDDSNRTKTAQVRRKG 246
>gi|146100420|ref|XP_001468859.1| putative 40S ribosomal protein S3A [Leishmania infantum JPCM5]
gi|269969537|sp|A4IAU0.1|RS3A1_LEIIN RecName: Full=40S ribosomal protein S3a-1
gi|134073228|emb|CAM71949.1| putative 40S ribosomal protein S3A [Leishmania infantum JPCM5]
Length = 264
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 2/220 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
+ A+K+WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL EE
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK+R ++VQG+N+LT F M TTDK+ SL+RKW T +E V+VKT D +T+RLF
Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFV 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FTK NQ R CYA+ ++ +R ++ +++ + + +K V V+ + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
+ I PL+ + IRKV++++ PKFD L+ HG V
Sbjct: 203 RCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASV 242
>gi|340057005|emb|CCC51345.1| putative 40S ribosomal protein S3A [Trypanosoma vivax Y486]
gi|340057006|emb|CCC51346.1| putative ribosomal protein S3a [Trypanosoma vivax Y486]
Length = 257
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 141/215 (65%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYDI AP F VR GKT+ +TQG K+A++ L+ RVFE +L DL +E+
Sbjct: 22 ETMSRKEWYDIVAPLNFEVRQFGKTICNKTQGIKVAADFLRGRVFESNLADLNKTQDEDD 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++L ++VQG+N+LT F+GM T+D++ +L+RKW T IEA V+ KT D + LRLF
Sbjct: 82 AYRKVKLIVQEVQGRNLLTQFYGMDMTSDRIYNLLRKWCTTIEATVEAKTADGYMLRLFV 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FT + NQ+ + CYA+T ++ +R ++ +I+ ++ +++ ++ ++
Sbjct: 142 IAFTSKQRNQLSKNCYAKTRLVKWVRMRVSKIITWYLEKNNISKVLDLLTRNILRDRLKA 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
++I PL+ + IRKVK+++ PK+D L+ HG+
Sbjct: 202 RCNAIVPLRYLCIRKVKVIRTPKYDPQALLAAHGE 236
>gi|407848945|gb|EKG03855.1| 40S ribosomal protein S3A, putative, partial [Trypanosoma cruzi]
Length = 262
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++
Sbjct: 23 ETMSRKEWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDD 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++ ++VQG+N+LT F M T+D++ L+RKW T IEA V+ KT D +TLRLF
Sbjct: 83 AYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEATVETKTADGYTLRLFV 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTK+ NQ+ + CYA+T ++ +R ++ ++ + + ++ V ++ + K
Sbjct: 143 IAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAK 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ I PL+++ IRKVK+++ P+FD L+ HG+
Sbjct: 203 RCNPIVPLRDIRIRKVKVVRTPRFDAQALLNAHGE 237
>gi|119597114|gb|EAW76708.1| hCG40355, isoform CRA_a [Homo sapiens]
Length = 162
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 118/161 (73%), Gaps = 9/161 (5%)
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+R
Sbjct: 1 MDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVR 60
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
QIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PK
Sbjct: 61 QIRKKMIEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPK 120
Query: 203 FDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
F+LGKLME+HG+ S ++ G KV+R + P+ E+
Sbjct: 121 FELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQES 161
>gi|6531419|gb|AAF15410.1| antigen [Leishmania major]
Length = 264
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 135/220 (61%), Gaps = 2/220 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
+ A+K+WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL EE
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK+R ++VQG+N+LT F M TTDK+ +L+RKW T +E V+VKT D +T+RLF
Sbjct: 83 AYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFV 142
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FTK NQ R CYA+ ++ +R ++ +++ + + +K V V+ + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
+ I PL+ + IRKV++++ PKFD L+ HG V
Sbjct: 203 RCNPILPLRELRIRKVRVVRTPKFDAQALLSAHGTIPASV 242
>gi|71405457|ref|XP_805346.1| 40S ribosomal protein S3a [Trypanosoma cruzi strain CL Brener]
gi|70868718|gb|EAN83495.1| 40S ribosomal protein S3a, putative [Trypanosoma cruzi]
Length = 246
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++
Sbjct: 22 ETMSRKEWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDD 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++ ++VQG+N+LT F M T+D++ L+RKW T IEA V+ KT D +TLRLF
Sbjct: 82 AYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVEAKTADGYTLRLFV 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTK+ NQ+ + CYA+T ++ +R ++ ++ + + ++ V ++ + K
Sbjct: 142 IAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ I PL+++ IRKVK+++ P+FD L+ HG+
Sbjct: 202 RCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGE 236
>gi|71413035|ref|XP_808675.1| 40S ribosomal protein S3a [Trypanosoma cruzi strain CL Brener]
gi|71413037|ref|XP_808676.1| 40S ribosomal protein S3a [Trypanosoma cruzi strain CL Brener]
gi|122018595|sp|Q4D2R9.1|RS3A1_TRYCC RecName: Full=40S ribosomal protein S3a-1
gi|70872928|gb|EAN86824.1| 40S ribosomal protein S3a, putative [Trypanosoma cruzi]
gi|70872929|gb|EAN86825.1| 40S ribosomal protein S3a, putative [Trypanosoma cruzi]
Length = 261
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++
Sbjct: 22 ETMSRKEWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDD 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++ ++VQG+N+LT F M T+D++ L+RKW T IEA V+ KT D +TLRLF
Sbjct: 82 AYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVETKTADGYTLRLFV 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTK+ NQ+ + CYA+T ++ +R ++ ++ + + ++ V ++ + K
Sbjct: 142 IAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ I PL+++ IRKVK+++ P+FD L+ HG+
Sbjct: 202 RCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGE 236
>gi|71665346|ref|XP_819644.1| 40S ribosomal protein S3a [Trypanosoma cruzi strain CL Brener]
gi|71665348|ref|XP_819645.1| 40S ribosomal protein S3a [Trypanosoma cruzi strain CL Brener]
gi|122045353|sp|Q4DZ41.1|RS3A2_TRYCC RecName: Full=40S ribosomal protein S3a-2
gi|70884954|gb|EAN97793.1| 40S ribosomal protein S3a, putative [Trypanosoma cruzi]
gi|70884955|gb|EAN97794.1| 40S ribosomal protein S3a, putative [Trypanosoma cruzi]
Length = 261
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++
Sbjct: 22 ETMSRKEWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDD 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++ ++VQG+N+LT F M T+D++ L+RKW T IEA V+ KT D +TLRLF
Sbjct: 82 AYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVEAKTADGYTLRLFV 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTK+ NQ+ + CYA+T ++ +R ++ ++ + + ++ V ++ + K
Sbjct: 142 IAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ I PL+++ IRKVK+++ P+FD L+ HG+
Sbjct: 202 RCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGE 236
>gi|32400861|gb|AAP80662.1|AF479043_1 40S ribosomal protein, partial [Triticum aestivum]
Length = 113
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 94/105 (89%), Gaps = 2/105 (1%)
Query: 132 RTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
RTCYAQ SQIRQIRRKM EIMV QAASCDLK LV KFI EVIG+EIEKATSSI+PLQNV+
Sbjct: 2 RTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVY 61
Query: 192 IRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA--DEPIPEA 234
+RKVKILKAPKFDLGKLMEVHGDY EDVGVK+DRPA DE IP A
Sbjct: 62 VRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPADGDEVIPGA 106
>gi|356506575|ref|XP_003522055.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3a-like,
partial [Glycine max]
Length = 121
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/122 (72%), Positives = 99/122 (81%), Gaps = 6/122 (4%)
Query: 19 RVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLT 78
RV K L+T IA EGLKHRVFEVSL DL +E+ A++KIRLRAEDVQGKNVLT
Sbjct: 2 RVYESSKGLLT------IAYEGLKHRVFEVSLTDLQGDEDDAFKKIRLRAEDVQGKNVLT 55
Query: 79 NFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQT 138
NF GM FTT+ LRSLVRKW TLIEA+VDVKTTDN+T R+FCIGFTKR NQVKRTCYAQ+
Sbjct: 56 NFXGMDFTTELLRSLVRKWQTLIEAHVDVKTTDNYTFRMFCIGFTKRRANQVKRTCYAQS 115
Query: 139 SQ 140
SQ
Sbjct: 116 SQ 117
>gi|295901414|dbj|BAJ07364.1| Tt6 protein [Taenia taeniaeformis]
Length = 176
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 116/157 (73%), Gaps = 1/157 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF KK+WY+++APS F R +TL+TRTQGTKIASEGLK RV ++SLGDL ++ +
Sbjct: 21 TDPFTKKEWYELRAPSMFSNRTCARTLITRTQGTKIASEGLKGRVIQLSLGDLSDKTQDI 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF GM T DKL +V KW + IEA+VDVKTTD +TLR F I
Sbjct: 81 FRKFKLQIEDVQGRHCLTNFHGMDLTRDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAA 157
FTK+ +Q K YAQT++I+++R K+ E++ + A
Sbjct: 141 AFTKKQEDQ-KSHAYAQTTRIKKLRAKIVEVVQREVA 176
>gi|407409536|gb|EKF32323.1| 40S ribosomal protein S3A, putative [Trypanosoma cruzi marinkellei]
Length = 261
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEH 59
+ ++K+WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++
Sbjct: 22 ETMSRKEWYDVVAPKNFEVRQFGKTICNKTQGTKIAADFLRGRVYESNLADLNKTQGDDD 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
AYRK++ ++VQG+N+LT F M +D++ L+RKW T IEA V+ +T D +TLRLF
Sbjct: 82 AYRKVKFVVQEVQGRNLLTQFHSMDMASDRVYFLLRKWCTTIEAAVEARTADGYTLRLFV 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FTK+ NQ+ + CYA+T ++ +R ++ ++ + ++ V ++ + K
Sbjct: 142 IAFTKKQSNQLSKNCYAKTRLVKWVRHRITNLIRQRLLKVNINEAVTLLTRNILRDRLAK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ I PL+++ IRKVK+++ P+FD L+ HG+
Sbjct: 202 RCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGE 236
>gi|351701921|gb|EHB04840.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 167
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 99/123 (80%), Gaps = 1/123 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA + +RN+GKTLVTRTQGTKI S+GLK VFEVSL DL N+E +
Sbjct: 23 DPFSKKDWYDMKALAMLNIRNIGKTLVTRTQGTKITSDGLKGCVFEVSLADLQNDEV-PF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+G
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTCDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVG 141
Query: 122 FTK 124
FTK
Sbjct: 142 FTK 144
>gi|387593375|gb|EIJ88399.1| hypothetical protein NEQG_01089 [Nematocida parisii ERTm3]
gi|387597032|gb|EIJ94652.1| hypothetical protein NEPG_00175 [Nematocida parisii ERTm1]
Length = 256
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 130/204 (63%), Gaps = 1/204 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE-HA 60
D +KK++Y++ PS F + G T+V R+QG A + ++ R FEV+ GDL+ +
Sbjct: 27 DVMSKKEFYNLTLPSIFETKQAGVTIVDRSQGNYFAPDAVRGRTFEVNQGDLMTSSNTQS 86
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK + + V+GK+ +++F M +DK++S+ +KWHTL+E V+T D +TLR+F +
Sbjct: 87 FRKFKFVVDGVRGKDAISSFHSMELISDKIKSIPKKWHTLVETCSKVETVDGYTLRVFTV 146
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
TKR P VK+ CYA+ SQ++ IR+ + +I+ + + C + +++K + E IG IE+
Sbjct: 147 SNTKRKPKSVKKNCYAKLSQVKAIRQIIFKIVSEELSGCKINDVMKKLMNETIGMRIEQE 206
Query: 181 TSSIYPLQNVFIRKVKILKAPKFD 204
IYPLQN ++KVK+LK PK D
Sbjct: 207 GIKIYPLQNCHVKKVKVLKRPKID 230
>gi|326567624|gb|ADZ95658.1| 40S ribosomal protein S3aE [Nosema bombycis]
Length = 235
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 126/199 (63%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
AD F++KDWYD+KAPS F + GKT +TRT + + L R F V+ DL E A
Sbjct: 24 ADSFSRKDWYDLKAPSIFPNSSCGKTFITRTSAKQNVATSLVGRKFAVNHADLTGSAEFA 83
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YRK + DV+GK+ + F GM TTDK++ +V+KWHTLIEA D+ + + R+
Sbjct: 84 YRKFIFKVADVKGKDCIGVFDGMRLTTDKVKGIVKKWHTLIEAQRDIVSKEGNVYRVTMN 143
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
T+R PN K+TCYA++S++++IR+ M E++ + + D++ +++K + I R +EK
Sbjct: 144 AITRRTPNWTKKTCYAKSSEVKKIRKIMFEVIDEELSGGDIQKIIKKLSTDSISRNVEKK 203
Query: 181 TSSIYPLQNVFIRKVKILK 199
S I+PLQNV + KVK +K
Sbjct: 204 GSQIFPLQNVHVIKVKTVK 222
>gi|160331456|ref|XP_001712435.1| rps3A [Hemiselmis andersenii]
gi|159765883|gb|ABW98110.1| rps3A [Hemiselmis andersenii]
Length = 222
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 132/199 (66%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
++ F KK+W ++K PS F + G T+V + ++E L +R++++SLGDL N+E +
Sbjct: 21 SNVFEKKEWIELKTPSLFGEKIFGNTIVNKRTNANKSTEILTNRIYQISLGDLNNKESLS 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RKI+L+ +V+ T+F+GM T DKL SLV+KW T IE +D+KT D F LR+FC
Sbjct: 81 FRKIKLKGSEVKNNTCETSFFGMDLTRDKLSSLVKKWQTTIETSIDIKTEDGFFLRIFCF 140
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
F+KR Q+K+T Y +SQIR IRRK+ ++ + +LKSL+ KF++E + EIEK
Sbjct: 141 VFSKRKKKQLKKTSYLTSSQIRAIRRKIIATLLKFSLENNLKSLIGKFLSEKLNSEIEKE 200
Query: 181 TSSIYPLQNVFIRKVKILK 199
I+P+ N +IRK+K+L+
Sbjct: 201 CRKIFPIHNFYIRKIKVLR 219
>gi|256084693|ref|XP_002578561.1| 40S ribosomal protein S3A [Schistosoma mansoni]
Length = 189
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 120/168 (71%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DPF KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 SDPFTKKEWYDIKAPAMFSKRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEY 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQVEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKF 168
FT +P + YAQ+++IR+IR ++ +I+ + ++CDLK +V K
Sbjct: 142 TFTPSVPRSERLHSYAQSTRIRRIRARLIDIIQQEVSTCDLKEVVNKL 189
>gi|350644764|emb|CCD60518.1| 40S ribosomal protein S3A, putative [Schistosoma mansoni]
Length = 189
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 120/168 (71%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
+DPF KK+WYDIKAP+ F R +TLVTRTQGT+IASE LK RV +SLGDL + E
Sbjct: 22 SDPFTKKEWYDIKAPAMFSRRTCARTLVTRTQGTRIASEALKGRVVTLSLGDLSEKNEEY 81
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF G+ T DKL S+V KW + IEA+VDVKTTD + LR F I
Sbjct: 82 FRKFKLQVEDVQGRHCLTNFHGLELTRDKLCSVVVKWRSTIEAHVDVKTTDGYLLRFFII 141
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKF 168
FT +P + YAQ+++IR+IR ++ +I+ + ++CDLK +V K
Sbjct: 142 TFTPSVPRSERLHSYAQSTRIRRIRARLIDIIQQEVSTCDLKEVVNKL 189
>gi|109390473|gb|ABG33775.1| ribosomal S3a [Musa acuminata]
Length = 94
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/93 (82%), Positives = 86/93 (92%)
Query: 70 DVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQ 129
DVQGKNVLTNFWGM+ TTDK+R +VR+W TLIEA+VDVKTTDN+TLR+FCI FTKR PNQ
Sbjct: 1 DVQGKNVLTNFWGMNLTTDKVRYIVRRWLTLIEAHVDVKTTDNYTLRMFCIAFTKRRPNQ 60
Query: 130 VKRTCYAQTSQIRQIRRKMREIMVAQAASCDLK 162
VKRTCYAQ+SQIRQIRRKMREIMV QA +CDLK
Sbjct: 61 VKRTCYAQSSQIRQIRRKMREIMVNQATTCDLK 93
>gi|444706768|gb|ELW48089.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 268
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 23/207 (11%)
Query: 37 ASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRK 96
+ G K RVFEVS DL N++ A+RK +L EDVQGKN LTNF GM T DK+ V+K
Sbjct: 75 SGAGCKGRVFEVSFVDLQNDQV-AFRKFKLITEDVQGKNCLTNFHGMDLTGDKM---VKK 130
Query: 97 WHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQA 156
W T+ EA+VDVKTTD + RLFC+GF K+ NQ+ +T + Q Q+ QI++KM EIM +
Sbjct: 131 WQTMTEAHVDVKTTDGYLFRLFCVGFIKKYNNQIWKTSHVQHQQVCQIQKKMMEIMTWEV 190
Query: 157 ASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
+ D K +V K I + IG++ EKA IYPL + PK +LGKL E+HG+ S
Sbjct: 191 QTNDCKEVVNKLIPDSIGKDREKACQPIYPLH----------QKPKCELGKLTELHGEGS 240
Query: 217 -------EDVGVKVDRP--ADEPIPEA 234
+++G +V+R + P+ E+
Sbjct: 241 SSGKAIGDEMGARVERADGYEPPVQES 267
>gi|402468530|gb|EJW03675.1| hypothetical protein EDEG_02005 [Edhazardia aedis USNM 41457]
Length = 287
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 134/236 (56%), Gaps = 9/236 (3%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEH-- 59
D F+KK+W++++ PS F + GKTLVTRT + + L R FE + DL E
Sbjct: 25 DTFSKKEWFNLRVPSIFTKQITGKTLVTRTTAKQNVEKLLIGRCFESNQADLFTAESSKS 84
Query: 60 --AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
R + EDV+GK+ ++ F GM DKLR V+KWHTLIE VKTTDN+ LR+
Sbjct: 85 ADCQRCFKFLVEDVRGKDAISTFNGMKVNNDKLRGFVKKWHTLIEGNALVKTTDNYLLRV 144
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
F +G ++R+ Y QT++++ IR+KM E++ CD+ ++K ++ +G+EI
Sbjct: 145 FVVGQSRRVEGNEDSRVYIQTTKVKAIRKKMFELIDEVFRHCDINEAMDKMCSDKLGKEI 204
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPE 233
EK S+I+PLQN KV ++K PK+ + V D D V + DE +P+
Sbjct: 205 EKQCSAIFPLQNCMTTKVMVVKRPKY-----VPVESDLVLDDDVVIRENLDEDLPQ 255
>gi|444732414|gb|ELW72710.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 200
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 123/215 (57%), Gaps = 52/215 (24%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNI-------------------------------------- 44
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
GK ++T G ++ L+ R + T+IEA+VDVKTTD + LRLFC+G
Sbjct: 45 -----------GKTLVTRTQGTKIVSNGLKG--RVFETMIEAHVDVKTTDGYLLRLFCVG 91
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ NQ+ +T AQ Q+RQI+ KM EI++ + + DLK +V K I + I ++IEKA
Sbjct: 92 FTKKHNNQIGKTSSAQHQQVRQIQ-KMMEIVIQEMKTNDLKEVVNKLIPDSIEKDIEKAC 150
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
SIYPL +VF+RKVK+LK P+F LGKL+E+HG+ S
Sbjct: 151 LSIYPLHDVFVRKVKMLKKPRFGLGKLVELHGEGS 185
>gi|119597984|gb|EAW77578.1| hCG33299, isoform CRA_b [Homo sapiens]
Length = 167
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 108/145 (74%), Gaps = 9/145 (6%)
Query: 99 TLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAAS 158
T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM+ + +
Sbjct: 22 TMIEAHVDVKTTDGYLLRLFCVGFTKKRKNQIRKTSYAQHQQVRQIRKKMMEIMIREVQT 81
Query: 159 CDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-- 216
DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S
Sbjct: 82 NDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSS 141
Query: 217 -----EDVGVKVDRP--ADEPIPEA 234
++ G KV+R + P+ E+
Sbjct: 142 GKATGDETGAKVERADGYEPPVQES 166
>gi|237862672|gb|ACR24961.1| ribosomal protein S3a [Lepidochitona cinerea]
Length = 143
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Query: 100 LIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASC 159
LIEA+VDVKTTDNF LR+FCIGFTK+ NQ+K+TCYAQ +Q+R IR+KM EI+ + +S
Sbjct: 1 LIEAHVDVKTTDNFLLRVFCIGFTKKRQNQMKKTCYAQHTQVRAIRKKMVEIITREVSSN 60
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 216
D+K +V K I + IG++IEKA IYPL +V+IRKVK+LK PKFD+GKLME+HG+
Sbjct: 61 DMKEIVNKLIPDSIGKDIEKACQGIYPLHDVYIRKVKVLKKPKFDVGKLMELHGEGGTKT 120
Query: 217 --EDVGVKVDRP 226
+ G KV+RP
Sbjct: 121 VITESGEKVERP 132
>gi|444723605|gb|ELW64256.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 214
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 132/242 (54%), Gaps = 60/242 (24%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+
Sbjct: 23 DPFSKKDWYDMKAPAMFNIRNI-------------------------------------- 44
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
GK ++T G +D L+ R + T+I+A+VDVKTT+ + L LFC+G
Sbjct: 45 -----------GKTLVTRTQGTKIASDGLKG--RVFETMIDAHVDVKTTNGYLLHLFCVG 91
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FTK+ N +++T YAQ Q+RQI +K EIM Q + DLK +V K I + I ++IEK
Sbjct: 92 FTKKHNNLIRKTSYAQHQQVRQIWKKKMEIMTWQVQTNDLKEVVNKLIPDSIEKDIEKVC 151
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR--PADEPIP 232
SIYPL +VF+RKVK+L PKF+LGKL+E+HG+ S ++ G KV++ + P+
Sbjct: 152 QSIYPLHDVFVRKVKMLNKPKFELGKLIELHGEGSSSGKATGDETGAKVEQVDGCEPPVQ 211
Query: 233 EA 234
E+
Sbjct: 212 ES 213
>gi|119597115|gb|EAW76709.1| hCG40355, isoform CRA_b [Homo sapiens]
Length = 167
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 107/145 (73%), Gaps = 9/145 (6%)
Query: 99 TLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAAS 158
T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + +
Sbjct: 22 TMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMIEIMTREVQT 81
Query: 159 CDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-- 216
DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S
Sbjct: 82 NDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSS 141
Query: 217 -----EDVGVKVDRP--ADEPIPEA 234
++ G KV+R + P+ E+
Sbjct: 142 GKATGDETGAKVERADGYEPPVQES 166
>gi|444728534|gb|ELW68990.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 157
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+ KTLVTRTQ T+ AS+G VFEV L DL N+E +RK ++ ED+QGKN L
Sbjct: 2 FNIRNIEKTLVTRTQRTRSASDG--ELVFEVRLTDLQNDEV-TFRKFKIITEDIQGKNCL 58
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQ 137
TNF GM T DK+ S V KW T+IEA+V+VKTTD + L LF +GF K+ N++++T YAQ
Sbjct: 59 TNFHGMDLTRDKMCSTVNKWQTMIEAHVNVKTTDGYLLHLFYVGFNKKRNNRIRKTTYAQ 118
Query: 138 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGR 175
Q+ QIR+KM EIM + + DLK +V K I + G+
Sbjct: 119 HQQVHQIRKKMMEIMTQEVQTNDLKEMVNKLIPDSTGK 156
>gi|414590755|tpg|DAA41326.1| TPA: hypothetical protein ZEAMMB73_350968 [Zea mays]
Length = 128
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/97 (79%), Positives = 85/97 (87%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKD YDIKAP F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL ++E+ Y
Sbjct: 22 DPFSKKDRYDIKAPPVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLVDLHSDEDKTY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWH 98
KIRL AEDVQG NV+TNFWGMSFTTDKL SLV+KWH
Sbjct: 82 MKIRLCAEDVQGGNVITNFWGMSFTTDKLHSLVKKWH 118
>gi|119625397|gb|EAX04992.1| ribosomal protein S3A, isoform CRA_e [Homo sapiens]
Length = 145
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 106/144 (73%), Gaps = 9/144 (6%)
Query: 100 LIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASC 159
+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + +
Sbjct: 1 MIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTN 60
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 216
DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S
Sbjct: 61 DLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSG 120
Query: 217 ----EDVGVKVDRP--ADEPIPEA 234
++ G KV+R + P+ E+
Sbjct: 121 KATGDETGAKVERADGYEPPVQES 144
>gi|444729890|gb|ELW70293.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 266
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 113/173 (65%), Gaps = 10/173 (5%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS GLK RVFEVSL DL N+E+
Sbjct: 22 VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASHGLKGRVFEVSLVDLQNDED-V 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L +DVQGKN LTNF GM T DK+ S V+KW +IE +VDVKTTD L +F I
Sbjct: 81 FRKFKLITKDVQGKNCLTNFHGMDLTRDKMCSTVKKWQIMIEVHVDVKTTDELKL-VFVI 139
Query: 121 ---GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIA 170
G + P K Q +RQI + AS ++ +VE +IA
Sbjct: 140 RIRGISGVSPKVQK---VLQLLHLRQIFNS--TFVKLNEASTNMLRIVEPYIA 187
>gi|444716578|gb|ELW57422.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 152
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 105/149 (70%), Gaps = 1/149 (0%)
Query: 38 SEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKW 97
S+GLK VFEVSL DL N++ +RK +L ED QGKN LTNF G+ T DK+ S+V++W
Sbjct: 2 SDGLKGHVFEVSLADLQNDKV-TFRKFKLITEDDQGKNFLTNFHGIDLTRDKMCSMVKRW 60
Query: 98 HTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAA 157
T+IEA DVKTTD + LRL +GFTK+ NQ+++T Y+Q Q+ QIR+ M EIM +
Sbjct: 61 QTMIEAQADVKTTDGYLLRLSYVGFTKKHNNQIRKTSYSQDQQVCQIRKMMMEIMTREVQ 120
Query: 158 SCDLKSLVEKFIAEVIGREIEKATSSIYP 186
+ DLK +V K I + IG++IEKA SIYP
Sbjct: 121 TNDLKKMVNKLIPDSIGKDIEKACQSIYP 149
>gi|449710705|gb|EMD49732.1| ribosomal S3Ae family protein, partial [Entamoeba histolytica KU27]
Length = 158
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 97/136 (71%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P F+ R VG+ +V +T GT+IASE LK RV EV+L DL+ E+
Sbjct: 23 AEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ + EDV GK+ L F G+ TTDKLRS+V+KW TLIE VDVKTTD +R+FCI
Sbjct: 83 AYNYKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCI 142
Query: 121 GFTKRLPNQVKRTCYA 136
GFT R NQ+K+T YA
Sbjct: 143 GFTSRKSNQIKKTSYA 158
>gi|310771983|emb|CBH29261.1| 40S ribosomal protein S3A [Anncaliia algerae]
Length = 230
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 123/203 (60%), Gaps = 1/203 (0%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEH 59
D F+KK+WY +K P F VGKTLVT+ + + + R FEVS GDL N+E +
Sbjct: 22 VDTFSKKEWYTLKVPDLFVKNEVGKTLVTKHTTKSLHEKAMIGRNFEVSQGDLNPNDEIN 81
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ +K R ++ G + F GM T D + ++RKWHTL++A+ DVKT D + LR+F
Sbjct: 82 SSKKFRFVITNINGVIANSEFNGMELTKDMKKGIIRKWHTLVKAHQDVKTKDGYELRIFV 141
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+G T + K+TCYA TS ++++R+ +++ +Q + +L +++ + G+E+EK
Sbjct: 142 MGVTXKRAKDTKKTCYAXTSDVKRVRKIXFDLIDSQFSELELSKVIKLLQTDNFGKEVEK 201
Query: 180 ATSSIYPLQNVFIRKVKILKAPK 202
T SI PLQNV I KVK++ PK
Sbjct: 202 KTYSIVPLQNVVISKVKVISRPK 224
>gi|70909553|emb|CAJ17198.1| ribosomal protein S3Ae [Eucinetus sp. APV-2005]
Length = 160
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 97/130 (74%)
Query: 85 FTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQI 144
TTDKLRS+V+KW TLI A DVKTTD + LR+FCIGFT + ++TCYAQ +Q+R I
Sbjct: 1 LTTDKLRSMVKKWQTLIVANADVKTTDGYLLRVFCIGFTNKDQLSHRKTCYAQHTQVRLI 60
Query: 145 RRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 204
R+KM EI+ +C+LK +V K + + I ++IEKA IYPL +V+IRKVK+LK P+F+
Sbjct: 61 RKKMVEIISRDVTNCELKEVVNKLLPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFE 120
Query: 205 LGKLMEVHGD 214
L KL+E+HGD
Sbjct: 121 LSKLLELHGD 130
>gi|326918419|ref|XP_003205486.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Meleagris
gallopavo]
Length = 144
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 23 VGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWG 82
V LVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF G
Sbjct: 32 VSGXLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHG 90
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYA 136
M T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YA
Sbjct: 91 MDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYA 144
>gi|378754534|gb|EHY64565.1| hypothetical protein NERG_02375 [Nematocida sp. 1 ERTm2]
Length = 237
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 129/205 (62%), Gaps = 2/205 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D KK++Y++ PS F ++ G T++ ++QG A + L+ R FEV+ DL + ++
Sbjct: 20 DIMTKKEFYNLTLPSLFNNKSAGTTIIDKSQGNYFAPDALRGRTFEVNQADL-PDNTNST 78
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK + + +GK+ +++F M +DK++S+ +KWHTLIE V+T D +TLR+F I
Sbjct: 79 RKFKFVIDGTKGKDAISSFHSMELISDKVKSIPKKWHTLIETCSKVETQDGYTLRIFTIC 138
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
TKR V + CYA+ SQ++ IR+ + +I V++ + D+ ++K + EV G +E+
Sbjct: 139 NTKRKAKSVSKNCYAKLSQVKSIRKVIFKI-VSEEFAGDINEAMKKMMTEVAGGRMEQEG 197
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLG 206
+ IYPLQN +I+KVK+LK P+ + G
Sbjct: 198 AKIYPLQNCYIKKVKVLKRPRIEEG 222
>gi|119597116|gb|EAW76710.1| hCG40355, isoform CRA_c [Homo sapiens]
Length = 151
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 108/161 (67%), Gaps = 20/161 (12%)
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+R
Sbjct: 1 MDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVR 60
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
QIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF
Sbjct: 61 QIRKKMIEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVF----------- 109
Query: 203 FDLGKLMEVHGDYS-------EDVGVKVDRPA--DEPIPEA 234
F+LGKLME+HG+ S ++ G KV+R + P+ E+
Sbjct: 110 FELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQES 150
>gi|449702270|gb|EMD42942.1| 40S ribosomal protein S3a [Entamoeba histolytica KU27]
gi|449702698|gb|EMD43288.1| 40S ribosomal protein S3a [Entamoeba histolytica KU27]
Length = 181
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 116/187 (62%), Gaps = 8/187 (4%)
Query: 55 NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFT 114
NE+ AY + + EDV GK+ L F G+ TTDKLRS+V+KW TLIE VDVKTTD
Sbjct: 3 NEKFGAYN-YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHL 61
Query: 115 LRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIG 174
+R+FCIGFT R NQ+K+T YA+++QI++IR+ M ++ +AAS +L V+ +
Sbjct: 62 IRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLRENKLP 121
Query: 175 REIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEA 234
+EI S ++ + NV+IRKVKILKA K D KL++ H D S V P+ E
Sbjct: 122 KEIVAKCSKVFSMDNVYIRKVKILKAGKIDSLKLLDQHQDTSAPVEA-------APVAEE 174
Query: 235 PTEVIGA 241
EV+ A
Sbjct: 175 KGEVVEA 181
>gi|300702029|ref|XP_002995084.1| hypothetical protein NCER_102161 [Nosema ceranae BRL01]
gi|269969592|sp|C4VBI8.1|RS3A_NOSCE RecName: Full=40S ribosomal protein S1
gi|239603829|gb|EEQ81413.1| hypothetical protein NCER_102161 [Nosema ceranae BRL01]
Length = 235
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 129/214 (60%), Gaps = 3/214 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEHA 60
D F+KK+WY++KAP+ F GKT+VT++ + + L R F+++ DL N EEHA
Sbjct: 24 DTFSKKEWYNLKAPAIFPNNVCGKTMVTKSSNKQNLALLLIGRKFDINQADLTGNLEEHA 83
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
RK R +V+GK+ + F GM T+DK++ ++RKWHTLIEA D+ D LR+F
Sbjct: 84 -RKFSFRVNEVRGKDCIGVFDGMHMTSDKVKGIIRKWHTLIEAEKDIVAKDGTILRVFVN 142
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
TK+ P + Y +TS+ ++IR+ M +++ + DL +++K AEVIG+ +EK
Sbjct: 143 AVTKKTPTCTSKRVYCKTSEEKKIRKVMFDVIEEELKGEDLNKIMKKLAAEVIGKSVEKK 202
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
S IYPLQN + KVK +K K D ME+ +
Sbjct: 203 GSLIYPLQNCCVIKVKTVKRGK-DTSNAMEIEAN 235
>gi|392512646|emb|CAD26541.2| 40S RIBOSOMAL PROTEIN S3A (LYSIN-RICH KRP-A) (S1 in yeast)
[Encephalitozoon cuniculi GB-M1]
Length = 239
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 124/199 (62%), Gaps = 1/199 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
+ FA+K+WY +++PS F GKTL+T++ G K + + R ++V+ DL + +
Sbjct: 25 NAFARKEWYTLRSPSIFPNNINGKTLMTKSAG-KNSYMNMIGRRYDVNQADLTGNNDVGH 83
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK + D++G + F GM T+DK +++++KWHTLIEA D+ D R+F +G
Sbjct: 84 RKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMG 143
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T+R P VK+TCY + S ++IR+ M +++ + + CD++ +++K E +G+ IE+
Sbjct: 144 VTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELG 203
Query: 182 SSIYPLQNVFIRKVKILKA 200
S I+PLQN +RKVK +K+
Sbjct: 204 SEIFPLQNCCVRKVKTIKS 222
>gi|62318995|dbj|BAD94105.1| 40S ribosomal protein S3A like protein [Arabidopsis thaliana]
Length = 95
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/95 (81%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
MR+IMV +A+SCDLK LV KFI E I REIEKAT IYPLQNVFIRKVKILKAPKFDLGK
Sbjct: 1 MRDIMVREASSCDLKDLVAKFIPEAIDREIEKATQGIYPLQNVFIRKVKILKAPKFDLGK 60
Query: 208 LMEVHGDYS-EDVGVKVDRPADEPIPEAPTEVIGA 241
LM+VHGDYS EDVGVKVDRPADE E PTE+IGA
Sbjct: 61 LMDVHGDYSAEDVGVKVDRPADEMAVEEPTEIIGA 95
>gi|429965335|gb|ELA47332.1| hypothetical protein VCUG_01216 [Vavraia culicis 'floridensis']
Length = 226
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 123/200 (61%), Gaps = 3/200 (1%)
Query: 4 FAKKDWYDIKAPSC-FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYR 62
F KK+ Y++ PS F NVG T++T+ I L+ RVFEV+ G+L + + +R
Sbjct: 26 FTKKETYNLTVPSSMFMTTNVGTTILTKQSTAAITERKLRGRVFEVNQGEL--QGDGTFR 83
Query: 63 KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGF 122
K + + G+++ F GM TTDK + +VRKWHTLIEA DV T+D+ LR+F +
Sbjct: 84 KYKFVCTKLVGRDLKGVFNGMELTTDKQKGIVRKWHTLIEAVSDVTTSDDVKLRIFTVAV 143
Query: 123 TKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
TK+ K+ CYA++SQ+++IR+ M +++ + + +V+K ++ I + IE+ S
Sbjct: 144 TKKSAALTKKHCYAKSSQVKEIRKAMFDVVKEEMDGQSVVEIVKKIASDKIDKRIEEMGS 203
Query: 183 SIYPLQNVFIRKVKILKAPK 202
IYPLQN F+ KVK+LK PK
Sbjct: 204 LIYPLQNCFVSKVKVLKRPK 223
>gi|115666602|ref|XP_783433.2| PREDICTED: 40S ribosomal protein S3a-like, partial
[Strongylocentrotus purpuratus]
Length = 147
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 91/116 (78%)
Query: 99 TLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAAS 158
TLI+A +DV+TTD + LRLFCIGFTKR NQ+K+T YAQ++Q+R IRRKM EIM + A+
Sbjct: 1 TLIDANIDVRTTDGYLLRLFCIGFTKRRQNQIKKTSYAQSTQVRAIRRKMIEIMARECAA 60
Query: 159 CDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
DLK +V K I + I R+IEKA IYPL +V IRKVK+L+ PKFD+ +LME+HG+
Sbjct: 61 NDLKEVVNKLIPDSIARDIEKACHRIYPLHDVHIRKVKVLRKPKFDVSRLMELHGE 116
>gi|444729305|gb|ELW69729.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 178
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Query: 92 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREI 151
S+V+KW T+ EA+VDVKTTD + L L C+GFTK+ NQ+++T YAQ Q+RQI +KM EI
Sbjct: 3 SMVKKWQTMTEAHVDVKTTDGYLLHLSCVGFTKKRRNQIRKTSYAQ--QVRQIWKKMIEI 60
Query: 152 MVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEV 211
M + + D K ++ K + IGR+IEKA SIYPL +VFIRKVK+L PKF+LGKLME+
Sbjct: 61 MAWEMQTNDSKEVINKLTPDSIGRDIEKACQSIYPLHDVFIRKVKMLNKPKFELGKLMEL 120
Query: 212 HGD 214
HG+
Sbjct: 121 HGE 123
>gi|431895761|gb|ELK05180.1| 40S ribosomal protein S3a [Pteropus alecto]
Length = 142
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 95/123 (77%)
Query: 92 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREI 151
S+V+KW TL EA+VDV+TTD + LRLFC+GFTK+ +Q+++T YAQ Q+ QI +K+ EI
Sbjct: 3 SMVKKWQTLTEAHVDVRTTDGYLLRLFCVGFTKKRNDQIQKTSYAQHRQVPQIWKKVIEI 62
Query: 152 MVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEV 211
M + + DLK +V K I + G++IEKA S+YPL +VF+RK+++LK PK +LGKLME+
Sbjct: 63 MTREVRTDDLKEVVNKLIPDSTGKDIEKACQSVYPLHDVFVRKIEMLKKPKCELGKLMEL 122
Query: 212 HGD 214
HG+
Sbjct: 123 HGE 125
>gi|444725135|gb|ELW65714.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 144
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 103/144 (71%), Gaps = 10/144 (6%)
Query: 100 LIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASC 159
+IE +V+VKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQI++K+ EIM + +
Sbjct: 1 MIEVHVNVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIQKKIMEIMTWEVQTN 60
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 216
LK +V K I + IG++IEKA SIYPL NVFIRKVK+ K PKF+LGKLME HG+ S
Sbjct: 61 GLKEVVNKLIPDSIGKDIEKACESIYPLHNVFIRKVKMQK-PKFELGKLMEFHGEGSSSG 119
Query: 217 ----EDVGVKVDRP--ADEPIPEA 234
+++G KV+R + P+ E+
Sbjct: 120 KATGDEMGAKVERADGYEPPVQES 143
>gi|390477322|ref|XP_003735274.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3a-like
[Callithrix jacchus]
Length = 215
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 105/156 (67%), Gaps = 9/156 (5%)
Query: 88 DKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRK 147
DK+ S+V+KW T+++ + + + LRLFC+GFTK+ NQ+++T YAQ Q+RQI +K
Sbjct: 50 DKICSMVKKWQTMMKLMLMSRLPGGYLLRLFCVGFTKKRNNQIRKTSYAQYQQVRQILKK 109
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EIM + + DLK V K I + G++IE+A SIYPL +VF+RKVK+LK PKF+LGK
Sbjct: 110 MXEIMTREVQTNDLKEAVNKLIPDSTGKDIEQACQSIYPLHDVFVRKVKMLKKPKFELGK 169
Query: 208 LMEVHGDYS-------EDVGVKVDRP--ADEPIPEA 234
L E+HG+ S ++ G KV+R + P+ E+
Sbjct: 170 LTELHGEGSSSGKATXDETGAKVERADGYEPPVQES 205
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGK 25
DPF+KKDWYD+KAP+ F +RN+GK
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGK 46
>gi|215260003|gb|ACJ64486.1| 40S ribosomal protein S3A [Culex tarsalis]
Length = 154
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 12/153 (7%)
Query: 94 VRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMV 153
V+KW TLIE VDVKTTDN+ R+FCIGFT + ++TCYAQ SQI+ IR+ M +I+
Sbjct: 1 VKKWQTLIECSVDVKTTDNYLPRVFCIGFTIKDQVSQRKTCYAQHSQIKAIRKNMTQIIT 60
Query: 154 AQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 213
S DL+ +V K + + I ++IEKA +YPL +V+IRKVK+LK P+FDL L+E+HG
Sbjct: 61 NNVTSSDLQEVVNKLLPDSIAKDIEKACQGVYPLHDVYIRKVKVLKKPRFDLANLLELHG 120
Query: 214 D----------YSEDVGVKVDRPA--DEPIPEA 234
D + + GV VDRP + P+ E+
Sbjct: 121 DGGGKGAEVSTGAAEGGVVVDRPEGYEPPVQES 153
>gi|124782946|gb|ABN14892.1| ribosomal protein S3a [Taenia asiatica]
Length = 183
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 118/167 (70%), Gaps = 2/167 (1%)
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+RK +L+ EDVQG++ LTNF GM T DKL +V KW + IEA+VDVKTTD +TLR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FTK+ +Q K YAQT++I+++R ++ E++ + A CDLKS+V+K I + IG++
Sbjct: 67 AFTKKQEDQ-KSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRP 226
SSI+PL +RKVK+LK PK DLG+++E+H + +++ G V RP
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPKLDLGRILELHSEGKADEFGEGVPRP 172
>gi|444728779|gb|ELW69221.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 306
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
Query: 12 IKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDV 71
+KA + F +RN+GKTLVTR QGTKI S+GLK RVFEVSL D L E++ A+RK +L EDV
Sbjct: 1 MKALAMFNIRNIGKTLVTRNQGTKIVSDGLKGRVFEVSLTD-LQEDKVAFRKFKLITEDV 59
Query: 72 QGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVK 131
QGKN LTNF GM T DK S+ KW T+++ + + K ++
Sbjct: 60 QGKNCLTNFHGMDLTHDKKCSMFNKWQTILKHMSMSRLPMGICFVPSVLSLPKNTSDEKD 119
Query: 132 RTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
C A +KM EIM + + DLK +V K I + IG++IEKA SIY L +VF
Sbjct: 120 LLCPASAGSPNP--KKMMEIMTREEQTNDLKEVVNKLILDSIGKDIEKACQSIYLLHDVF 177
Query: 192 IRK 194
+RK
Sbjct: 178 VRK 180
>gi|355745446|gb|EHH50071.1| hypothetical protein EGM_00836, partial [Macaca fascicularis]
Length = 118
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWH 98
RK +L EDVQGKN LTNF GM T DK+ S+V+KW
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQ 118
>gi|253745399|gb|EET01354.1| Ribosomal protein S3a [Giardia intestinalis ATCC 50581]
Length = 247
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 2/203 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DP+ KK+WY + AP+ F+ R++G+T VT+T G KIA++ + HRV+EV+LGDL E+++
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLKIATDVINHRVYEVNLGDLNPGAEDQN 79
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
K L+ + V LTNF GM T K SL RK I+ ++D+ TTD + LR+F
Sbjct: 80 GNTKFYLQTQMVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFV 139
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FT+R Q K+ C+ + IR +R + E + + ++ LV K + I ++ +
Sbjct: 140 IAFTERFRFQRKKNCHVKGRVIRMMRAGIYETLHNEIGKINIPVLVTKLSSFEINAKLTE 199
Query: 180 ATSSIYPLQNVFIRKVKILKAPK 202
A I ++V IR+VK++K P+
Sbjct: 200 ALQKITACRDVMIRRVKVVKRPR 222
>gi|431894206|gb|ELK04006.1| 40S ribosomal protein S3a [Pteropus alecto]
Length = 123
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 2/123 (1%)
Query: 30 RTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDK 89
RTQGTKI S+GLK RVFEVSL D N+E A RK + EDVQGKN L NF GM+ T DK
Sbjct: 2 RTQGTKITSDGLKGRVFEVSLADQQNDEI-AVRKFKRITEDVQGKNCLANFHGMNLTRDK 60
Query: 90 LRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMR 149
+ S+V+ W T+IEA+V+VKTT++++LRLFC+GFTK+ NQ +T Y Q Q+ I RKM
Sbjct: 61 MCSMVKNWQTMIEAHVNVKTTNSYSLRLFCVGFTKKRNNQTLKTSYVQHQQVHLI-RKMM 119
Query: 150 EIM 152
EIM
Sbjct: 120 EIM 122
>gi|123384332|ref|XP_001298952.1| ribosomal protein S3Ae [Trichomonas vaginalis G3]
gi|121879674|gb|EAX86022.1| ribosomal protein S3Ae, putative [Trichomonas vaginalis G3]
Length = 247
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 4/231 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVR-NVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+W + P+ F + ++G T+ + ++ + + +RV+E+S D++N+ HA
Sbjct: 18 DSFIKKEWRHVMVPAYFTGKHDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVNDLSHA 77
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YR R+ G V T F GM T DKL S++RK+ TLI A VD KT D F LRLF +
Sbjct: 78 YRLFSWRS-IAAGSEVYTQFAGMRLTHDKLDSIMRKYRTLINASVDAKTADGFILRLFTV 136
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+L N K YA + + RQ+R M + + S ++ L + F+ E I EI +
Sbjct: 137 GFTKKLANSHKNHTYANSHKARQVRDVMVKCLTDACESNGVEQLCKDFVDEKIENEIVEK 196
Query: 181 TSSIYPLQNVFIRKVKILKAPKF--DLGKLMEVHGDYSEDVGVKVDRPADE 229
I ++ V+I KVK++KAP + K++++ D ++ +RPA+E
Sbjct: 197 CKQICQIEGVYITKVKVIKAPALSNEQVKVLKISKDAAQLSLAPTERPAEE 247
>gi|70928815|ref|XP_736563.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511201|emb|CAH84885.1| hypothetical protein PC301285.00.0 [Plasmodium chabaudi chabaudi]
Length = 138
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Query: 106 DVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLV 165
DVKT DN+ L + C+ F K+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV
Sbjct: 3 DVKTVDNYHL-MLCLAFAKKRPNQTKTTCYAQTSQIKKIRKKMVDIMHAEASKVLLKDLV 61
Query: 166 EKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 223
+K I E IG+E+EK I+PLQNV IRKVKILK PK D+ KLME+H D +D G V
Sbjct: 62 KKIIPESIGKEVEKQCKKIFPLQNVLIRKVKILKRPKLDISKLMELHTDPKDDSGKNV 119
>gi|123410038|ref|XP_001303592.1| ribosomal protein S3Ae [Trichomonas vaginalis G3]
gi|121884983|gb|EAX90662.1| ribosomal protein S3Ae, putative [Trichomonas vaginalis G3]
Length = 247
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 130/231 (56%), Gaps = 4/231 (1%)
Query: 2 DPFAKKDWYDIKAPSCFR-VRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+W + P+ F R++G T+ + ++ + + +RV+E+S D++N+ HA
Sbjct: 18 DSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYINNRVWELSHADMVNDLSHA 77
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YR R+ G V T F GM T DKL S++RK+ T+I+A VD KT D F LRLF I
Sbjct: 78 YRLFSWRS-IAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTI 136
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+L N K YA + + RQ+R M + + + ++ L + F+ E I EI +
Sbjct: 137 GFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEIVEK 196
Query: 181 TSSIYPLQNVFIRKVKILKAPKF--DLGKLMEVHGDYSEDVGVKVDRPADE 229
I +++V+I KVK++KAP + K +++ D ++ +RP +E
Sbjct: 197 CKQICQIESVYITKVKVIKAPALSNEQVKTLKISKDAAQLSLAPTERPTEE 247
>gi|396081337|gb|AFN82954.1| 40S ribosomal protein S3A [Encephalitozoon romaleae SJ-2008]
Length = 239
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FA+K+WY++++PS F GKTLV++ G + R ++V+ DL + A+
Sbjct: 25 DSFARKEWYNLRSPSIFPSNINGKTLVSKATGKNAHMRAIGRR-YDVNHADLTKNNDVAH 83
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK + DV+G + + F GM T+DK +++++KWH+LIEA D+ D R+F +
Sbjct: 84 RKFIFKIGDVKGADCIGFFDGMELTSDKHKAMIKKWHSLIEAQKDIVAKDQSVFRVFVMA 143
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
TKR K+TCY + S ++IR+ M +++ + + ++ K E +G+ IE+
Sbjct: 144 VTKRPHGYTKKTCYVKHSDEKRIRKIMFDVIEEELGGRSVDDIMSKLSNETVGKRIEELG 203
Query: 182 SSIYPLQNVFIRKVKILKA 200
S I+PLQN +RKVK +K+
Sbjct: 204 SEIFPLQNCCVRKVKTIKS 222
>gi|123438226|ref|XP_001309900.1| ribosomal protein S3Ae [Trichomonas vaginalis G3]
gi|121891646|gb|EAX96970.1| ribosomal protein S3Ae, putative [Trichomonas vaginalis G3]
Length = 247
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 130/231 (56%), Gaps = 4/231 (1%)
Query: 2 DPFAKKDWYDIKAPSCFR-VRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+W + P+ F R++G T+ + ++ + + +RV+E+S D++N+ HA
Sbjct: 18 DSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVNDLSHA 77
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YR R+ G V T F GM T DKL S++RK+ T+I+A VD KT D F LRLF I
Sbjct: 78 YRLFSWRS-IAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTI 136
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+L N K YA + + RQ+R M + + + ++ L + F+ E I EI +
Sbjct: 137 GFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEIVEK 196
Query: 181 TSSIYPLQNVFIRKVKILKAPKF--DLGKLMEVHGDYSEDVGVKVDRPADE 229
I +++V+I KVK++KAP + K +++ D ++ +RP +E
Sbjct: 197 CKQICQIESVYITKVKVIKAPALSNEQVKTLKISKDAAQLSLAPTERPTEE 247
>gi|123504337|ref|XP_001328722.1| ribosomal protein S3Ae [Trichomonas vaginalis G3]
gi|121911669|gb|EAY16499.1| ribosomal protein S3Ae, putative [Trichomonas vaginalis G3]
Length = 247
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 129/231 (55%), Gaps = 4/231 (1%)
Query: 2 DPFAKKDWYDIKAPSCFR-VRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+W + P+ F R++G T+ + ++ + + +RV+E+S D++N+ HA
Sbjct: 18 DSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVNDLSHA 77
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
YR R+ G V T F GM T DKL S++RK+ T+I+A VD KT D F LRLF I
Sbjct: 78 YRLFSWRSI-AAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTI 136
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
GFTK+L N K YA + + RQ+R M + + + ++ L + F+ E I EI
Sbjct: 137 GFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEIVDK 196
Query: 181 TSSIYPLQNVFIRKVKILKAPKF--DLGKLMEVHGDYSEDVGVKVDRPADE 229
I +++V+I KVK++KAP + K +++ D ++ +RP +E
Sbjct: 197 CKQICQIESVYITKVKVIKAPALSNEQVKTLKISKDAAQLSLAPTERPTEE 247
>gi|308160082|gb|EFO62589.1| Ribosomal protein S3a [Giardia lamblia P15]
Length = 248
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 121/213 (56%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DP+ KK+WY + AP+ F+ R++G+T VT+T G K+A++ + HRV+EV+LGDL E+ +
Sbjct: 20 DPYLKKEWYPVVAPAHFKSRHIGQTPVTKTAGLKVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
K L+ + V LTNF GM T K SL RK I+ ++D+ TTD + LR+F
Sbjct: 80 GNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFV 139
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FT R Q ++ C+ + IR +R + E + + + LV K + ++ +
Sbjct: 140 IAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNEMGKVSIPVLVTKLSNFEVNAKLTE 199
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A I ++V IR+VK++K P+ + L +H
Sbjct: 200 ALQKITMCRDVMIRRVKVVKRPRSTMELLSTMH 232
>gi|330040568|ref|XP_003239957.1| 40S ribosomal protein S3A [Cryptomonas paramecium]
gi|327206883|gb|AEA39059.1| 40S ribosomal protein S3A [Cryptomonas paramecium]
Length = 220
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 123/195 (63%), Gaps = 6/195 (3%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
K++W D+K PS ++ GKTL+ + + K SE +V+++SL DL E+ +++KI+
Sbjct: 25 KREWVDMKIPSFIGKKSFGKTLINKNREKK--SEDSSKKVYKISLADLNKNEDLSFKKIK 82
Query: 66 LRAEDVQGKNVL--TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFT 123
L+ + K+ L T F+G+ T DK+ SL+RKW TL+E VD+KT + + +R+F + F
Sbjct: 83 LKH--IGNKDALLETKFYGLELTRDKISSLIRKWQTLVETNVDIKTQEKYIVRIFVMVFP 140
Query: 124 KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS 183
K+ Q K+T Y ++Q R IRRK+ EI++ + + SLVEK +++ I +IEK
Sbjct: 141 KKKKMQKKKTTYLNSTQTRTIRRKITEILIKEMNEIRIDSLVEKVLSDQIIYQIEKKCRK 200
Query: 184 IYPLQNVFIRKVKIL 198
+PL N+F+ K+KIL
Sbjct: 201 TFPLYNLFVNKIKIL 215
>gi|159109814|ref|XP_001705170.1| Ribosomal protein S3a [Giardia lamblia ATCC 50803]
gi|269969581|sp|A8BS79.1|RS3A_GIAIC RecName: Full=40S ribosomal protein S3a
gi|157433250|gb|EDO77496.1| Ribosomal protein S3a [Giardia lamblia ATCC 50803]
Length = 248
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 2/213 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
DP+ KK+WY + AP+ F+ R++G+T VT+T G ++A++ + HRV+EV+LGDL E+ +
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
K L+ + V LTNF GM T K SL RK I+ ++D+ TTD + LR+F
Sbjct: 80 GNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFV 139
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FT R Q ++ C+ + IR +R + E + + + LV K + ++ +
Sbjct: 140 IAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTE 199
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
A I ++V IR+VK++K P+ + L +H
Sbjct: 200 ALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>gi|401826253|ref|XP_003887220.1| 40S ribosomal protein S3AE [Encephalitozoon hellem ATCC 50504]
gi|392998379|gb|AFM98239.1| 40S ribosomal protein S3AE [Encephalitozoon hellem ATCC 50504]
Length = 239
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 117/199 (58%), Gaps = 1/199 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D FA+K+WY++++PS F GKTLV ++ G K A + R ++V+ DL + A+
Sbjct: 25 DAFARKEWYNLRSPSIFPNNINGKTLVAKSSG-KNAYMKIIGRRYDVNHADLTKNNDVAH 83
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK + +V+G + + F GM T+DK +++++KWH+LIEA D+ D R+F +
Sbjct: 84 RKFIFKIGEVKGADCIGFFDGMELTSDKHKAMIKKWHSLIEAEKDIVAKDQSVFRVFVMA 143
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
TKR K+TCY + S ++IR+ M ++ + + ++ K E +G+ IE+
Sbjct: 144 VTKRPHGYTKKTCYVKHSDEKRIRKIMFNVIEEELGGRSVDDIMNKLANETVGKRIEELG 203
Query: 182 SSIYPLQNVFIRKVKILKA 200
S I+PLQ+ +RKVK +K+
Sbjct: 204 SEIFPLQSCCVRKVKTIKS 222
>gi|429962417|gb|ELA41961.1| hypothetical protein VICG_00978 [Vittaforma corneae ATCC 50505]
Length = 253
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 1/199 (0%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRK 63
F+KK +++ F V + GKT +T+ + + L R F+V+ GDL +R
Sbjct: 28 FSKKQSFNLVTSPIFPVTHHGKTYHPKTKAKQDLTSFLVGRTFKVNQGDLNGMNTETHRN 87
Query: 64 IRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFT 123
+ DV+G + L F GM DKL +++RKWH+LI+A++D+ T+D R+F T
Sbjct: 88 FCFKVGDVRGNDCLGFFNGMYMARDKLANMIRKWHSLIDAHLDLTTSDGSIWRVFVHAVT 147
Query: 124 KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS 183
KRLP QVKR Y QT+Q ++IR+ + E++ + D+ LV+K E +G+E+E +
Sbjct: 148 KRLPGQVKRNSYCQTTQAKKIRKIIFEVLTEEFEGIDVDKLVKKLSTEAVGKEVENRCAK 207
Query: 184 IYPLQNVFIRKVKILKAPK 202
IYPL V I KVK +K K
Sbjct: 208 IYPLTAV-ISKVKPIKNMK 225
>gi|297293866|ref|XP_001093267.2| PREDICTED: 40S ribosomal protein S3a-like [Macaca mulatta]
Length = 159
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 56 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 114
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKL 90
RK +L EDVQGKN LTNF GM T DK+
Sbjct: 115 RKFKLITEDVQGKNCLTNFHGMDLTRDKM 143
>gi|303389197|ref|XP_003072831.1| 40S ribosomal protein S3A [Encephalitozoon intestinalis ATCC 50506]
gi|303301974|gb|ADM11471.1| 40S ribosomal protein S3A [Encephalitozoon intestinalis ATCC 50506]
Length = 239
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
+ F +K+WY++++PS F GKT V ++ +K + L R ++V+ DL + +
Sbjct: 25 NTFERKEWYNLRSPSIFPCNISGKTFVAKST-SKNTNLKLIGRRYDVNHADLTKNNDFTH 83
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
RK + DV+G + + F GM T+DK +++++KWHTLIEA D+ D R+F +
Sbjct: 84 RKFIFKVGDVKGADCIGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDRSVFRVFVMA 143
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T+R K+TCY + S+ ++IR+ M +++ + + ++ K E +G+ IE+
Sbjct: 144 VTRRPQGYTKKTCYVKHSEEKKIRKIMFDVIEQELGGRSVDEIMNKLSNETVGKRIEELG 203
Query: 182 SSIYPLQNVFIRKVKILKA 200
S I+PLQN +RKVK +K+
Sbjct: 204 SEIFPLQNCCVRKVKTIKS 222
>gi|440494527|gb|ELQ76900.1| 40S ribosomal protein S3A [Trachipleistophora hominis]
Length = 226
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASE-GLKHRVFEVSLGDLLNEEEHAYR 62
F KK+ Y++ PS + T + Q T +E L+ RVFEV+ G+L + +R
Sbjct: 26 FTKKEVYNLTVPSSMFMTTTVGTTILTKQSTAAITERKLRGRVFEVNQGEL--QGNSPFR 83
Query: 63 KIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGF 122
K + + G+++ + F GM TTDK + LVRKWHTLIEA DV T+D+ LR+F +
Sbjct: 84 KYKFVCTKLTGRDLKSVFNGMELTTDKQKGLVRKWHTLIEAVSDVTTSDDVKLRVFTVAV 143
Query: 123 TKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
TK+ K+ CYA++SQ+++IR+ M +++ + + +V K + I + IE+ S
Sbjct: 144 TKKPALWTKKHCYAKSSQVKEIRKAMFDVVKEEMEGQSVVEIVRKISEDKIDKRIEEMGS 203
Query: 183 SIYPLQNVFIRKVKILKAPK 202
I+PLQN ++ KVK+LK PK
Sbjct: 204 LIFPLQNCYVSKVKVLKRPK 223
>gi|444721039|gb|ELW61795.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 145
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 92/133 (69%), Gaps = 7/133 (5%)
Query: 100 LIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASC 159
+IEA+V+VKT D ++LR FC+GFTK NQ+ +T YAQ Q+RQI +K EIM + +
Sbjct: 1 MIEAHVNVKTIDGYSLRQFCVGFTKNCNNQIWKTSYAQHQQVRQIWKKKMEIMPREVQTN 60
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 216
LK +V K I + + ++IE A IYPL ++FIRKVK+LK PKF+LGKLME+HG+ S
Sbjct: 61 GLKEVVNKLIPDSMRKDIEMACQFIYPLHDIFIRKVKMLKKPKFELGKLMELHGEGSSSG 120
Query: 217 ----EDVGVKVDR 225
++ G KV++
Sbjct: 121 KATGDETGAKVEQ 133
>gi|149392543|gb|ABR26074.1| 40S ribosomal protein S3a [Oryza sativa Indica Group]
Length = 88
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 71/76 (93%), Gaps = 1/76 (1%)
Query: 155 QAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
QA+SCDLK LV KFI EVIG+EIEKATSSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGD
Sbjct: 1 QASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGD 60
Query: 215 YS-EDVGVKVDRPADE 229
Y+ ED+G K+DRPA++
Sbjct: 61 YAKEDIGTKLDRPAED 76
>gi|449703150|gb|EMD43649.1| ribosomal S3Ae family protein, partial [Entamoeba histolytica KU27]
Length = 140
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
A+PF+KK+WY++K P F+ R VG+ +V +T GT+IASE LK RV EV+L DL+ E+
Sbjct: 23 AEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFG 82
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
+ + EDV GK+ L F G+ TTDKLRS+V+KW TLIE VDVKTTD +R+F
Sbjct: 83 AYNYKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIF 140
>gi|157112427|ref|XP_001657530.1| hypothetical protein AaeL_AAEL006141 [Aedes aegypti]
gi|108878091|gb|EAT42316.1| AAEL006141-PA, partial [Aedes aegypti]
Length = 161
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 98/162 (60%), Gaps = 10/162 (6%)
Query: 27 LVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMS 84
LV RTQGT+IAS+ LK VFEVSL DL N+ E ++RK L AE V G+NVL NF GM
Sbjct: 1 LVNRTQGTRIASDVLKRHVFEVSLADLQNDTDAERSFRKFNLIAE-VHGRNVLCNFHGMD 59
Query: 85 FTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQI 144
TD+ RS+V+KW TL E VDVKTTD CIGFT +TC AQ SQI++
Sbjct: 60 LITDE-RSIVKKWQTLNECSVDVKTTD------VCIGFTINDSVSQHKTCNAQHSQIKKN 112
Query: 145 RRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
RRKM I+ S ++K +V + + I RE + T S +
Sbjct: 113 RRKMTTIITRNVTSSNMKEVVNMLLPDSIVRESTRCTMSTFA 154
>gi|444732155|gb|ELW72464.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 155
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 98/149 (65%), Gaps = 10/149 (6%)
Query: 92 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREI 151
S+V+KW T+IEA+V V+ TD + L LFC+ FTK+ N +++T + Q Q+ I +KM EI
Sbjct: 3 SMVKKWQTVIEAHVVVRVTDGYLLHLFCVRFTKKRNNWIQKTSHVQQQQVHHIWKKMVEI 62
Query: 152 MVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEV 211
+ DLK ++ K I + G++IE+A SIYPL +VFIRKVK+ + PKF+LGKLME
Sbjct: 63 KTRAVQTNDLKEVINKLIPDSTGKDIEEACQSIYPLHDVFIRKVKMPRKPKFELGKLMEH 122
Query: 212 HGD-------YSEDVGVKVDRPAD--EPI 231
HG+ ++ G KV++ AD EP+
Sbjct: 123 HGEGGSSGKATGDETGAKVEQ-ADGYEPL 150
>gi|238477345|gb|ACR43484.1| ribosomal protein S3a [Rimicaris exoculata]
Length = 128
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 90/126 (71%), Gaps = 7/126 (5%)
Query: 116 RLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGR 175
R+FCIGFT+R+ NQ K+T YAQ Q++ IR+KM +I+ + A+ +LK +V K I + +
Sbjct: 1 RVFCIGFTERMNNQTKKTTYAQHQQVKNIRKKMVDIITREVANSELKEVVNKLIPDTMAD 60
Query: 176 EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD------YSEDVGVKVDRPAD- 228
+I KA +SIYPL++V IRKVK+LK P+FDL KLME+HG+ +DVG KVDRP +
Sbjct: 61 DIRKARNSIYPLKDVHIRKVKVLKKPRFDLNKLMEMHGESGKAIASGDDVGSKVDRPDNY 120
Query: 229 EPIPEA 234
EP +A
Sbjct: 121 EPPVQA 126
>gi|19173561|ref|NP_597364.1| 40S RIBOSOMAL PROTEIN S3A (LYSIN-RICH KRP-A) (S1 in yeast)
[Encephalitozoon cuniculi GB-M1]
gi|74621240|sp|Q8SS05.1|RS3A_ENCCU RecName: Full=40S ribosomal protein S1
gi|449329192|gb|AGE95466.1| 40S ribosomal protein S3a [Encephalitozoon cuniculi]
Length = 189
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 99/159 (62%)
Query: 44 RVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEA 103
R ++V+ DL + +RK + D++G + F GM T+DK +++++KWHTLIEA
Sbjct: 16 RRYDVNQADLTGNNDVGHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEA 75
Query: 104 YVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKS 163
D+ D R+F +G T+R P VK+TCY + S ++IR+ M +++ + + CD++
Sbjct: 76 QKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQK 135
Query: 164 LVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 202
+++K E +G+ IE+ S I+PLQN +RKVK +K+ +
Sbjct: 136 IMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIKSHQ 174
>gi|444721546|gb|ELW62278.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 167
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Query: 48 VSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDV 107
VSL DL +++ +RK++L EDVQGKN LTNF GM T K+ S+V+KW IEA+ DV
Sbjct: 30 VSLADL-QKDKVTFRKLKLITEDVQGKNCLTNFHGMDLTHGKMCSMVKKWQPTIEAH-DV 87
Query: 108 KTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEK 167
KTTD + LRLFC+G TK+ NQ+++T AQ Q+ QI++KM EIM + + LK +V K
Sbjct: 88 KTTDGYLLRLFCVGLTKKHNNQIRKTSNAQHQQVHQIQKKMTEIMTREGQTNGLKEVVNK 147
Query: 168 FIAEVIGRE 176
I + IG++
Sbjct: 148 LIPDSIGKD 156
>gi|390470037|ref|XP_003734223.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3a-like
[Callithrix jacchus]
Length = 181
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNF 80
RK +L EDVQGKN LTNF
Sbjct: 82 RKFKLITEDVQGKNCLTNF 100
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 7/58 (12%)
Query: 175 REIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
+IE+A S+YPL +VF+RKVK+LK PKF+LGKLME+HG S ++ G KV+R
Sbjct: 112 HDIEQACQSVYPLHHVFVRKVKMLKKPKFELGKLMELHGAGSSSGKATGDETGAKVER 169
>gi|4836409|gb|AAD30429.1| 40S ribosomal protein S3A [Avena fatua]
Length = 84
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/77 (79%), Positives = 68/77 (88%), Gaps = 2/77 (2%)
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 219
DLK LV+KFI E+IG+EIEKAT SI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY EDV
Sbjct: 1 DLKELVQKFIPELIGKEIEKATPSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDV 60
Query: 220 GVKVDRPA--DEPIPEA 234
G K+DRPA DE IP A
Sbjct: 61 GTKLDRPADGDEVIPGA 77
>gi|338224310|gb|AEI88042.1| S3ae ribosomal protein [Scylla paramamosain]
Length = 111
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 81/110 (73%)
Query: 88 DKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRK 147
DKLRS+V+KW T IEA DVKTTD + LR+FCIGFT+++ +Q ++T YAQ +Q++ IR+K
Sbjct: 1 DKLRSMVKKWQTCIEANADVKTTDGYILRVFCIGFTEKVSSQTRKTAYAQHTQVKNIRKK 60
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
M +I+ AS +LK +V K I + + +I KA + IYPL+ V IRKVK+
Sbjct: 61 MVDIITRAVASSELKEVVNKLIPDSMADDIRKACNLIYPLKEVHIRKVKV 110
>gi|162606320|ref|XP_001713190.1| 40S ribosomal Protein S3a [Guillardia theta]
gi|75308240|sp|Q9AW90.1|RS3A_GUITH RecName: Full=40S ribosomal protein S3a
gi|12580662|emb|CAC26979.1| 40S ribosomal Protein S3a [Guillardia theta]
Length = 219
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D ++++ + AP F + +GKTL+ + + + +++++VSL D+L +EE +
Sbjct: 19 DVNSRQELIKVYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKEEFSS 77
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + T F G++ T DK+ SL++KWHTLIE V+ KT D + L+LF I
Sbjct: 78 INFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIA 137
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
+K+ N +T Y +SQ R +RR++ +I++ + + D+K + + + I +IE
Sbjct: 138 QSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINC 197
Query: 182 SSIYPLQNVFIRKVKIL 198
S I+P+ V IRK+K++
Sbjct: 198 SKIFPIHQVNIRKIKVV 214
>gi|28189587|dbj|BAC56408.1| similar to ribosomal protein S3a [Bos taurus]
Length = 94
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 72/93 (77%)
Query: 73 GKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 132
G+ +LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++
Sbjct: 1 GQKLLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRK 60
Query: 133 TCYAQTSQIRQIRRKMREIMVAQAASCDLKSLV 165
T YAQ Q+RQIR+KM EIM + + DLK +V
Sbjct: 61 TSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVV 93
>gi|383152689|gb|AFG58456.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152691|gb|AFG58457.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152697|gb|AFG58460.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
Length = 66
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/68 (89%), Positives = 61/68 (89%), Gaps = 4/68 (5%)
Query: 171 EVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
EVIGREIEKATSSIYPLQNVFIRK KILKAPKFDLGKLMEVHGDYSEDVGVKVDRP D
Sbjct: 1 EVIGREIEKATSSIYPLQNVFIRKAKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVD-- 58
Query: 231 IPEAPTEV 238
EAP EV
Sbjct: 59 --EAPAEV 64
>gi|195356034|ref|XP_002044487.1| GM23235 [Drosophila sechellia]
gi|194131762|gb|EDW53708.1| GM23235 [Drosophila sechellia]
Length = 118
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLN--EEEH 59
DPF++KDWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK RVFEVSL DL + E
Sbjct: 23 DPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPER 82
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLR 91
++RK RL AEDVQ +NVL NF GM TTDK R
Sbjct: 83 SFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYR 114
>gi|444721356|gb|ELW62095.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 144
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 86/177 (48%), Gaps = 51/177 (28%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
DPF+KKDWYD+KAP+ F VRN+GKTLVTR Q TKI +G K E
Sbjct: 19 VDPFSKKDWYDVKAPTMFNVRNIGKTLVTRIQETKIVPDGFKDNTSE------------- 65
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
T IEA+++VKTTD + L LFC+
Sbjct: 66 --------------------------------------TKIEAHINVKTTDGYLLHLFCV 87
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
GFTK + +AQ Q+ QI++KM EIM + + DLK +V K I + G++I
Sbjct: 88 GFTKTMQQSDTEDLHAQHQQVHQIQKKMMEIMTREVQTSDLKEVVNKLIPDSTGQDI 144
>gi|361068403|gb|AEW08513.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152665|gb|AFG58444.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152667|gb|AFG58445.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152669|gb|AFG58446.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152671|gb|AFG58447.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152673|gb|AFG58448.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152675|gb|AFG58449.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152677|gb|AFG58450.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152679|gb|AFG58451.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152681|gb|AFG58452.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152683|gb|AFG58453.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152685|gb|AFG58454.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152687|gb|AFG58455.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152693|gb|AFG58458.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152695|gb|AFG58459.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
gi|383152699|gb|AFG58461.1| Pinus taeda anonymous locus CL163Contig2_05 genomic sequence
Length = 66
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 60/68 (88%), Gaps = 4/68 (5%)
Query: 171 EVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 230
EVIGREIEKATSSIYPLQNVFIRK KILKAPKFDLGKLMEVHGDYSEDVGVKVDRP D
Sbjct: 1 EVIGREIEKATSSIYPLQNVFIRKAKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVD-- 58
Query: 231 IPEAPTEV 238
E P EV
Sbjct: 59 --EVPAEV 64
>gi|354505062|ref|XP_003514591.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Cricetulus
griseus]
Length = 101
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWY++KAP+ F +RN+GKTLVTRTQ TKIA++GLK RVFEVSL DL N+E A+
Sbjct: 23 DPFSKKDWYNVKAPAMFNIRNIGKTLVTRTQETKIAADGLKGRVFEVSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNF 80
RK +L EDVQGKN LTNF
Sbjct: 82 RKFKLITEDVQGKNCLTNF 100
>gi|402873243|ref|XP_003900493.1| PREDICTED: 40S ribosomal protein S3a-like [Papio anubis]
Length = 128
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KA + F RN+GKTLVTRTQGTKIA LK RVFEVSL DL N+E A+
Sbjct: 26 DPFSKKDWYDVKAHAMFSARNIGKTLVTRTQGTKIAPGSLKGRVFEVSLADLQNDEV-AF 84
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTD 88
RK +L EDVQGKN LTNF G+ T D
Sbjct: 85 RKFKLITEDVQGKNYLTNFQGVDLTCD 111
>gi|444730859|gb|ELW71232.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 369
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F VRN GKTLVTRTQGT AS+G K RVFEVS D+ ++ A+RK +L ED QGK+ L
Sbjct: 2 FNVRNTGKTLVTRTQGTSTASDGRKGRVFEVSPADV-QSDDVAFRKFKLNTEDAQGKDCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNF 113
TNF GM T DK+ +V+KW T+ EA+VDVKTTD +
Sbjct: 61 TNFHGMGLTRDKMCPIVKKWQTMTEAHVDVKTTDGY 96
>gi|414590756|tpg|DAA41327.1| TPA: hypothetical protein ZEAMMB73_350968 [Zea mays]
Length = 159
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 71/115 (61%), Gaps = 30/115 (26%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTK------------------------- 35
DPF+KKD YDIKAP F VRN+GKTLV+RTQGTK
Sbjct: 21 VDPFSKKDRYDIKAPPVFSVRNIGKTLVSRTQGTKAVTFVIRSYNKLGVPSLCTLWSVSL 80
Query: 36 -----IASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSF 85
IASEGLKHRVFEVSL DL ++E+ Y KIRL AEDVQG NV+TNFW M +
Sbjct: 81 CITIPIASEGLKHRVFEVSLVDLHSDEDKTYMKIRLCAEDVQGGNVITNFWVMIY 135
>gi|361068401|gb|AEW08512.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162168|gb|AFG63708.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162170|gb|AFG63709.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162172|gb|AFG63710.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162174|gb|AFG63711.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162176|gb|AFG63712.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162178|gb|AFG63713.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162180|gb|AFG63714.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162182|gb|AFG63715.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162184|gb|AFG63716.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162186|gb|AFG63717.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162188|gb|AFG63718.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162190|gb|AFG63719.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162192|gb|AFG63720.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162194|gb|AFG63721.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162196|gb|AFG63722.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162198|gb|AFG63723.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162200|gb|AFG63724.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
gi|383162202|gb|AFG63725.1| Pinus taeda anonymous locus CL163Contig2_03 genomic sequence
Length = 66
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 59/66 (89%)
Query: 113 FTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEV 172
+ LR+FCIGFTKR PNQVKRTCYAQTSQIRQIRRKMREIMV +A SCDLK LV KFI EV
Sbjct: 1 YGLRMFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVREATSCDLKELVAKFIPEV 60
Query: 173 IGREIE 178
IGREIE
Sbjct: 61 IGREIE 66
>gi|224050343|ref|XP_002188524.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Taeniopygia
guttata]
Length = 119
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL
Sbjct: 3 NQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 62
Query: 188 QNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDR 225
+V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R
Sbjct: 63 HDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGTKVER 107
>gi|399949633|gb|AFP65291.1| 40S ribosomal protein S3A [Chroomonas mesostigmatica CCMP1168]
Length = 230
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 14/209 (6%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D KK+W +K P F G TL+ ++ + + +++F VSL D+ E+ ++
Sbjct: 22 DSIEKKEWIFVKTPMNFGSNIFGHTLLNKSTS---SIPNINNKIFNVSLADINENEKDSF 78
Query: 62 RKIRLRAE-----DVQG----KNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDN 112
KI+L+ D+ G K LT+F+G T DKL S+V+KW T IE+ +D+KT D
Sbjct: 79 VKIKLKGSKLEYGDLLGFENEKKCLTDFYGSEITRDKLSSMVKKWQTTIESAIDIKTEDG 138
Query: 113 FTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLV--EKFIA 170
F LR+F I F+K+ Q+K+ Y +SQIR IRRK+ EI++ L +L+ + + +
Sbjct: 139 FFLRIFWIAFSKKKKGQLKKAFYLNSSQIRAIRRKISEIILQITNKRILANLLIGDIYFS 198
Query: 171 EVIGREIEKATSSIYPLQNVFIRKVKILK 199
I +I + I P+ + + RK+K+LK
Sbjct: 199 RHINNQIVRVCRKIAPIHSFYFRKIKMLK 227
>gi|74101454|gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi]
Length = 71
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 61/70 (87%)
Query: 172 VIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPI 231
VIG+EIEKAT+SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY ED GVK+DRP ++
Sbjct: 2 VIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDFGVKLDRPGEDVP 61
Query: 232 PEAPTEVIGA 241
E EV+GA
Sbjct: 62 VEGEAEVVGA 71
>gi|338728995|ref|XP_003365806.1| PREDICTED: 40S ribosomal protein S3a-like [Equus caballus]
Length = 153
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D +KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK VFE+SL DL N+E A+
Sbjct: 23 DQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEV-AF 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTD 88
RK +L EDVQGK L NF M + D
Sbjct: 82 RKFKLITEDVQGKRCLINFRSMGLSCD 108
>gi|432115193|gb|ELK36724.1| 40S ribosomal protein S3a [Myotis davidii]
Length = 127
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 67/89 (75%)
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
NQ+++T YAQ Q+RQIR+ M EIM + + DLK +V K I + IG+ IEKA IYPL
Sbjct: 24 NQIRKTSYAQHQQVRQIRKMMMEIMTREVQTNDLKEVVNKLIPDSIGKHIEKACQCIYPL 83
Query: 188 QNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
+VF+RK+K+LK PKFDLGKLME+HG+ S
Sbjct: 84 HDVFVRKIKMLKKPKFDLGKLMELHGEGS 112
>gi|444730965|gb|ELW71334.1| Coiled-coil domain-containing protein 25 [Tupaia chinensis]
Length = 260
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 69/88 (78%)
Query: 129 QVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQ 188
Q+++T YAQ +RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL
Sbjct: 136 QIRKTSYAQHQPVRQIRKKMMEIMTREVQTNDLKEVVTKLIPDSIGKDIEKACQSIYPLH 195
Query: 189 NVFIRKVKILKAPKFDLGKLMEVHGDYS 216
+VF+RKVK+LKAP+F+LGKLME+HG+ S
Sbjct: 196 DVFVRKVKMLKAPRFELGKLMELHGEGS 223
>gi|344244117|gb|EGW00221.1| 40S ribosomal protein S3a [Cricetulus griseus]
Length = 95
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVT+TQGTKIAS+GLK RVFEVSL DL N +E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTKTQGTKIASDGLKGRVFEVSLADLQN-DEIAF 81
Query: 62 RKIRLRAEDVQGKN 75
RK +L EDVQ KN
Sbjct: 82 RKFKLITEDVQVKN 95
>gi|444721863|gb|ELW62573.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 153
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 79/118 (66%), Gaps = 7/118 (5%)
Query: 115 LRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIG 174
L L +G + L N +++T YAQ Q+RQIR+KM E+M+ + + DLK +V K I + IG
Sbjct: 24 LPLHVLGHSHGLVNTIRKTSYAQHQQVRQIRKKMMELMILEVQTNDLKEVVMKLIPDSIG 83
Query: 175 REIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKVDR 225
++ EKA SI PL +VF+RKVK+LK PKF+LGKL E+HG+ ++ G KV+R
Sbjct: 84 KDREKAGQSICPLHDVFVRKVKMLKKPKFELGKLTELHGEGGSSGKATGDETGTKVER 141
>gi|444722347|gb|ELW63045.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 254
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 76/105 (72%), Gaps = 8/105 (7%)
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
NQ+++T YAQ Q+RQIR+KM EIM + + DLK V K I + IG+++EKA SIYPL
Sbjct: 139 NQIRKTSYAQHQQVRQIRKKMMEIMTWEVQTNDLKE-VTKLIPDSIGKDVEKAGQSIYPL 197
Query: 188 QNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
+VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R
Sbjct: 198 YDVFVRKVKVLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 242
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEH-A 60
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFE + + +H
Sbjct: 92 DPFSKKDWYDVKAPAMFYIRNIGKTLVTRTQGTKIASDGLKGRVFENNQIRKTSYAQHQQ 151
Query: 61 YRKIRLRAEDVQGKNVLTN 79
R+IR + ++ V TN
Sbjct: 152 VRQIRKKMMEIMTWEVQTN 170
>gi|351715092|gb|EHB18011.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 119
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
+PF+KKDWYD+K + F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL +E A+
Sbjct: 23 EPFSKKDWYDVKVLALFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL--NKEVAF 80
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDK 89
RK L ED+QG+N LT+ G ++ K
Sbjct: 81 RKFNLITEDIQGQNCLTSMHGKGSSSGK 108
>gi|116753403|ref|YP_842521.1| 30S ribosomal protein S3Ae [Methanosaeta thermophila PT]
gi|121694315|sp|A0B5A7.1|RS3A_METTP RecName: Full=30S ribosomal protein S3Ae
gi|116664854|gb|ABK13881.1| SSU ribosomal protein S3AE [Methanosaeta thermophila PT]
Length = 211
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F VG+TL L RV E +LGDL N K+R
Sbjct: 15 KQWYKVLAPEMFGRTPVGETLAN-------DPNKLLGRVIETTLGDLTNNFSKQNTKLRF 67
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ + V G T F G TTD +RSLV++ + I+A VDV T+D + +R+ FT
Sbjct: 68 KIDAVAGDTAYTKFIGHEMTTDYIRSLVKRRTSRIDAVVDVTTSDGYLVRVKPSCFT--- 124
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
VKR A+ +Q++ IR R++++++A + DL L+++ + + +I K ++YP
Sbjct: 125 ---VKR---ARANQVKAIREISRQVIISRAGNIDLNGLIQEVVLGKLSLDIYKDAKAVYP 178
Query: 187 LQNVFIRKVKILKAP 201
L+ V IRK +IL P
Sbjct: 179 LRRVEIRKTEILAGP 193
>gi|444705875|gb|ELW47259.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 136
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
L NQ+++T YA+ ++RQI +KM EIM + DLK +V K I + IG++IEKA S Y
Sbjct: 18 LNNQIQKTSYARYQRVRQILKKMMEIMTQEVQRNDLKEVVNKLIPDSIGKDIEKACQSTY 77
Query: 186 PLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
PL +VF+RK K LK PKF+LGKLME+HG+ S +++G KV+R
Sbjct: 78 PLHDVFVRKTKTLKKPKFELGKLMELHGEGSSSGKATGDEMGTKVER 124
>gi|70941987|ref|XP_741214.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519452|emb|CAH84425.1| hypothetical protein PC301033.00.0 [Plasmodium chabaudi chabaudi]
Length = 117
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 71/96 (73%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D F KK+WYD+ AP+ F VR GKTLVT+T G K+A++GLK R++EV+L DL N+E+ A
Sbjct: 21 TDVFTKKEWYDLNAPNVFMVRKFGKTLVTKTIGKKLATDGLKGRIYEVNLADLNNDEDQA 80
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRK 96
++KI+L + + ++ T+F G+S T DKL SL+RK
Sbjct: 81 HKKIKLICDHIVNRDCYTDFCGLSITRDKLCSLIRK 116
>gi|307104570|gb|EFN52823.1| hypothetical protein CHLNCDRAFT_15784, partial [Chlorella
variabilis]
Length = 72
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 53/71 (74%), Positives = 56/71 (78%)
Query: 10 YDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAE 69
YDIKAPS F RNVGKTLVTRTQGTKIAS+GL RV EVSL DL N E AYR I+LR E
Sbjct: 1 YDIKAPSMFNTRNVGKTLVTRTQGTKIASDGLNGRVVEVSLADLQNNEADAYRNIKLRVE 60
Query: 70 DVQGKNVLTNF 80
DVQG+N LT F
Sbjct: 61 DVQGRNCLTQF 71
>gi|296209955|ref|XP_002751760.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Callithrix
jacchus]
Length = 106
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 8/99 (8%)
Query: 140 QIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 199
Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK
Sbjct: 2 QVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLK 61
Query: 200 APKFDLGKLMEVHGDYS-------EDVGVKVDRPAD-EP 230
PKF+LGKLME+HG+ S ++ G KV+R D EP
Sbjct: 62 IPKFELGKLMELHGEGSSSGKATGDETGAKVERADDYEP 100
>gi|45269041|gb|AAS55933.1| 40S ribosomal protein S3a, partial [Sus scrofa]
Length = 106
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 7/93 (7%)
Query: 140 QIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 199
Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK
Sbjct: 2 QVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLK 61
Query: 200 APKFDLGKLMEVHGDYS-------EDVGVKVDR 225
PKF+LGKLME+HG+ S ++ G KV+R
Sbjct: 62 KPKFELGKLMELHGEGSSSGKATGDETGAKVER 94
>gi|119616353|gb|EAW95947.1| hCG1643030, isoform CRA_b [Homo sapiens]
Length = 213
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 72/104 (69%), Gaps = 3/104 (2%)
Query: 113 FTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEV 172
TLR+ C+ K+ NQ+++T YAQ Q+ QI+++M EI+ + + D K + K I +
Sbjct: 60 MTLRVMCL---KKCNNQIQKTSYAQHQQVCQIQKEMMEIINTEVQTNDFKKVFNKLIPDN 116
Query: 173 IGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
IG++IE A SIYPL +VFIRKVK+LK PKF+LGKL+E H + S
Sbjct: 117 IGKDIENACQSIYPLHDVFIRKVKMLKKPKFELGKLIEFHDEVS 160
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQ 32
DPF+KKDWY +KAP+ +R++GKTL + Q
Sbjct: 25 DPFSKKDWYHVKAPAMVSIRSIGKTLGFKEQ 55
>gi|56481167|gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481169|gb|AAV92215.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481171|gb|AAV92216.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481173|gb|AAV92217.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481175|gb|AAV92218.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481177|gb|AAV92219.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481179|gb|AAV92220.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481181|gb|AAV92221.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481183|gb|AAV92222.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481185|gb|AAV92223.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481187|gb|AAV92224.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481189|gb|AAV92225.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481191|gb|AAV92226.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481193|gb|AAV92227.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481195|gb|AAV92228.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481197|gb|AAV92229.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481199|gb|AAV92230.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481201|gb|AAV92231.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481203|gb|AAV92232.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481205|gb|AAV92233.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481207|gb|AAV92234.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481209|gb|AAV92235.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481211|gb|AAV92236.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481213|gb|AAV92237.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481215|gb|AAV92238.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481217|gb|AAV92239.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481219|gb|AAV92240.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481221|gb|AAV92241.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
Length = 57
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/57 (87%), Positives = 52/57 (91%)
Query: 185 YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTEVIGA 241
YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP DE EA TE++GA
Sbjct: 1 YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPVDEVPAEAETELVGA 57
>gi|197128041|gb|ACH44539.1| putative ribosomal protein S3a [Taeniopygia guttata]
Length = 181
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N +E A+
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQN-DEVAF 81
Query: 62 RK 63
RK
Sbjct: 82 RK 83
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
Query: 145 RRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 204
R+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+LK PKF+
Sbjct: 82 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFE 141
Query: 205 LGKLMEVHGD-------YSEDVGVKVDR 225
LGKLME+HG+ ++ G KV+R
Sbjct: 142 LGKLMELHGEGGGAGKPSGDEAGTKVER 169
>gi|383320601|ref|YP_005381442.1| 30S ribosomal protein S3AE [Methanocella conradii HZ254]
gi|379321971|gb|AFD00924.1| SSU ribosomal protein S3AE [Methanocella conradii HZ254]
Length = 222
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F K+WY + AP+ F N+G+TL E + RV E +LGD+ +
Sbjct: 10 DAFRAKNWYQVFAPAEFNRVNIGETLADE-------PEKMIGRVMESTLGDITGDWAKQN 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ R E+V G + T+F G T D +RSLV++ T I+A + V T D + LRL +
Sbjct: 63 TKMLFRIEEVGGNSAYTSFIGHEMTKDYMRSLVKRRTTKIDANLVVTTKDGYKLRLKPLV 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT VKR A+TSQI IR+ M E++ ++ LV + I +I KAT
Sbjct: 123 FT------VKR---ARTSQIESIRKVMVEVVENRSKELTFNELVSDVVNGKIAADIYKAT 173
Query: 182 SSIYPLQNVFIRKVKIL 198
+IYPL+ V + K +++
Sbjct: 174 KNIYPLRRVEVAKSEVV 190
>gi|444730528|gb|ELW70910.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 134
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 66/100 (66%)
Query: 95 RKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVA 154
+K +IEA+VDVKT D + LRLFC+G T + NQ+++T +AQ Q+RQIR+KM EIM
Sbjct: 27 KKRLIMIEAHVDVKTIDGYLLRLFCVGLTNKHKNQIQKTSHAQHQQVRQIRKKMMEIMTC 86
Query: 155 QAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRK 194
+ D K +V K I + G++ EKA SIY L VF+ K
Sbjct: 87 EVQKNDSKEVVTKLIPDSTGKDKEKACQSIYSLHEVFVIK 126
>gi|294496118|ref|YP_003542611.1| 30S ribosomal protein S3AE [Methanohalophilus mahii DSM 5219]
gi|292667117|gb|ADE36966.1| SSU ribosomal protein S3AE [Methanohalophilus mahii DSM 5219]
Length = 200
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I+ P +G+T++ T T SE L R E ++GD+ N+
Sbjct: 10 DKWKNKTWYNIETPEF-----IGRTVIGTT--TTDESEKLVGRTIETTVGDITNDFSKQN 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+RL + V G T F G TTD LRS+V++ + I+ ++V T D LR+ I
Sbjct: 63 IKLRLAIDSVTGDTANTAFIGHEITTDYLRSIVKRQTSRIDNNLEVTTKDGRKLRIKPIA 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT VKR A++SQIR IR M +I++ +AA D + +VE+ + + I +
Sbjct: 123 FT------VKR---ARSSQIRAIREIMAKIVLERAAELDFEHIVEEIVTGKLAANIYRNA 173
Query: 182 SSIYPLQNVFIRKVKIL 198
+IYP++ V IRK ++L
Sbjct: 174 KTIYPIRRVEIRKTEVL 190
>gi|91774248|ref|YP_566940.1| 30S ribosomal protein S3Ae [Methanococcoides burtonii DSM 6242]
gi|91713263|gb|ABE53190.1| SSU ribosomal protein S3Ae [Methanococcoides burtonii DSM 6242]
Length = 235
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 20/240 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I AP ++G +T T E L R+ E ++G+L N+
Sbjct: 11 DKWKLKQWYNIVAPKFIGSNHIG---LTPTDD----PESLIGRIVETTVGELTNDFSKHN 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++L ++V G T F G TTD LRS+V++ + I+ ++VKT D + +R+ I
Sbjct: 64 IKLKLEIDNVTGDVANTRFIGHEITTDYLRSIVKRQTSRIDTNLNVKTKDGYKIRVKPIC 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT VKR A+TSQI+ +R M E +A+ D + VE+ I + I +
Sbjct: 124 FT------VKR---ARTSQIKALRDIMTETTAKRASELDFEQFVEEAIVGKLSANIYRKA 174
Query: 182 SSIYPLQNVFIRKVKILKAP--KFDLGKLMEVHGDYSEDV--GVKVDRPADEPIPEAPTE 237
SIYPL+ V IRK ++ P + + + V +E V + P +E PE PTE
Sbjct: 175 KSIYPLRRVEIRKTEVQVVPPHRMAVASITPVEPVVTEAPVEEVVAETPVEEVAPEKPTE 234
>gi|386002276|ref|YP_005920575.1| 30S ribosomal protein S3Ae [Methanosaeta harundinacea 6Ac]
gi|357210332|gb|AET64952.1| 30S ribosomal protein S3Ae [Methanosaeta harundinacea 6Ac]
Length = 198
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + P F VG+TL + L RV E +LG+L N K++
Sbjct: 17 KQWYKVVGPEMFGKSPVGETLAS-------DPSNLMGRVIETTLGELTNNFSKQNTKLKF 69
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
R + V G + T+F G T+D +RSLV++ + I++ +DV T+D + +R+ FT
Sbjct: 70 RVDQVAGDSAYTSFVGHELTSDYVRSLVKRRTSRIDSIIDVTTSDGYRVRVKPSCFT--- 126
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
VKR A+T+Q++ IR I+ +A + DL +++ + + +I K IYP
Sbjct: 127 ---VKR---ARTTQVKTIRNIASNIIQEKAGTLDLNQFIQEVVLGRLSLDIYKDAKDIYP 180
Query: 187 LQNVFIRKVKILKAP 201
L+ V IRK +IL P
Sbjct: 181 LRRVEIRKTEILAGP 195
>gi|389851579|ref|YP_006353813.1| 30S ribosomal protein S3Ae [Pyrococcus sp. ST04]
gi|388248885|gb|AFK21738.1| RPS3A, small subunit ribosomal protein S3Ae [Pyrococcus sp. ST04]
Length = 202
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
D + K WY I AP F VG T E + +RV EV+L D+ E +
Sbjct: 12 DKWKLKQWYIIYAPDFFGNVEVGLTPAD-------DPEKVLNRVIEVTLRDVTGEFSPKA 64
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
Y K+ + DV+G+N T F GM +RS+VR+ T I+ ++ T D + LR+
Sbjct: 65 GYIKLYFQVYDVKGQNAYTKFKGMKLARHYIRSIVRRRTTRIDGIFNITTKDGYKLRVMA 124
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ R QTSQ R IR+ M++I+ +AA + K V + + I EI K
Sbjct: 125 MAIAMRR---------IQTSQERAIRKIMQDIIYKKAAELNFKDFVLEAVNGKIAAEIAK 175
Query: 180 ATSSIYPLQNVFIRKVKILKAP 201
IYPL+N IRK+K+L+ P
Sbjct: 176 EAKKIYPLKNSEIRKIKVLEEP 197
>gi|20094897|ref|NP_614744.1| 30S ribosomal protein S3 [Methanopyrus kandleri AV19]
gi|48474885|sp|Q8TVD1.1|RS3A_METKA RecName: Full=30S ribosomal protein S3Ae
gi|19888133|gb|AAM02674.1| Ribosomal protein S3AE [Methanopyrus kandleri AV19]
Length = 211
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F VG+T E + RV E +LGD+L++ +
Sbjct: 4 DKWKDKVWYTILAPDMFDNVEVGETPAD-------DPEKVIGRVLETTLGDVLDDITKHH 56
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ R DV+G + F G D +RSLVR+ + I+ +DV T D + +R+ +
Sbjct: 57 IKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLA 116
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIA----EVIGREI 177
FT R A+TSQ R IR++M +++ A CD + + ++ E I +I
Sbjct: 117 FTTRR---------AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQI 167
Query: 178 EKATSSIYPLQNVFIRKVKILKAP 201
++A IYP++ IRK ++L+ P
Sbjct: 168 KEAGRKIYPIRQAEIRKTEVLEEP 191
>gi|444723381|gb|ELW64038.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 120
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 7/99 (7%)
Query: 134 CYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIR 193
YA Q+ QI++KM EIM + + D K V K I + IG++IEKA SIYP NVFIR
Sbjct: 10 SYAHHQQVYQIQKKMMEIMTQEMQTNDSKEEVNKMIPDSIGKDIEKACQSIYPFHNVFIR 69
Query: 194 KVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
KVK+LK PKF+LGKL E+HG+ S +++G KV+R
Sbjct: 70 KVKMLKKPKFELGKLRELHGEGSSSGKATGDEMGAKVER 108
>gi|430812138|emb|CCJ30411.1| unnamed protein product [Pneumocystis jirovecii]
Length = 89
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 61/78 (78%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EI+ +A+ C +K LV+KFI EVIGREI K+T I+PLQNVFIRKVKILKAP+ D+ +
Sbjct: 1 MFEIIQREASMCSMKDLVQKFIPEVIGREITKSTQGIFPLQNVFIRKVKILKAPRTDIQR 60
Query: 208 LMEVHGDYSEDVGVKVDR 225
L+E+H + ED GVKV +
Sbjct: 61 LLELHEESVEDTGVKVSK 78
>gi|18978426|ref|NP_579783.1| 30S ribosomal protein S3 [Pyrococcus furiosus DSM 3638]
gi|397652298|ref|YP_006492879.1| 30S ribosomal protein S3Ae [Pyrococcus furiosus COM1]
gi|22001964|sp|Q8TZE1.1|RS3A_PYRFU RecName: Full=30S ribosomal protein S3Ae
gi|428697926|pdb|3J20|A Chain A, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18894270|gb|AAL82178.1| SSU ribosomal protein S3AE [Pyrococcus furiosus DSM 3638]
gi|393189889|gb|AFN04587.1| 30S ribosomal protein S3Ae [Pyrococcus furiosus COM1]
Length = 198
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F VG T E + +RV EV+L D+ + ++
Sbjct: 11 DKWKLKQWYIIYAPDFFGGVEVGLTPAD-------DPEKVLNRVVEVTLKDVTGDFTKSH 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ +
Sbjct: 64 VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR+ M+EI+ +A + K V + + I EI K
Sbjct: 124 IAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEA 174
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
IYPL+ IRK+K+L+ P+
Sbjct: 175 KKIYPLRKAEIRKIKVLEEPQ 195
>gi|14590013|ref|NP_142077.1| 30S ribosomal protein S3Ae [Pyrococcus horikoshii OT3]
gi|7388211|sp|O57803.1|RS3A_PYRHO RecName: Full=30S ribosomal protein S3Ae
gi|3256445|dbj|BAA29128.1| 199aa long hypothetical 30S ribosomal protein S3a [Pyrococcus
horikoshii OT3]
Length = 199
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F VG T E + +RV EV+L D+ + +
Sbjct: 13 DKWKLKQWYIIYAPDFFGGVEVGLTPAD-------DPEKVMNRVVEVTLKDITGDFTKGH 65
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ +
Sbjct: 66 VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMA 125
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR+ M+EI+ +A + K V + + I EI K
Sbjct: 126 IAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEG 176
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 177 KKIYPLKKAEIRKIKVLGEP 196
>gi|330509087|ref|YP_004385515.1| 30S ribosomal protein S3Ae [Methanosaeta concilii GP6]
gi|328929895|gb|AEB69697.1| ribosomal protein S3Ae [Methanosaeta concilii GP6]
Length = 210
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
AD K WY + +P F G+T+ E + R+ E +LGDL N
Sbjct: 9 ADSRKAKQWYKVVSPEMFGRVPFGETIAN-------DPERIVGRIIETTLGDLTNNFSKQ 61
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
K++ R + V G + T F G TTD +RSLV++ + I++ VDV TTD +T+R+
Sbjct: 62 NTKLKFRVDRVAGDSAYTKFLGHEMTTDYVRSLVKRRTSRIDSIVDVTTTDGYTVRIKPS 121
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
FT VKR A+ +Q++ IR + +++ ++ + DL L++ + I +I K
Sbjct: 122 CFT------VKR---ARANQVKCIRDLSKSVVMERSKNLDLNQLIQDVVGGKISLDIYKE 172
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDL 205
IYPL+ V +RK +I P +
Sbjct: 173 AKVIYPLRRVEVRKTEIRTEPALSV 197
>gi|85062373|emb|CAA79183.1| Cyc07 protein,S-phase specific [Arabidopsis thaliana]
Length = 62
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 49/57 (85%)
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
D K LV KFI E IGREIEKAT IYPLQNVFIRKVKILK PKFDLGKLMEVHGDY+
Sbjct: 1 DRKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKDPKFDLGKLMEVHGDYT 57
>gi|332158237|ref|YP_004423516.1| 30S ribosomal protein S3Ae [Pyrococcus sp. NA2]
gi|331033700|gb|AEC51512.1| 30S ribosomal protein S3Ae [Pyrococcus sp. NA2]
Length = 202
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F VG T Q + +RV EV+L D+ + +
Sbjct: 12 DKWKLKQWYVIYAPDFFGGVEVGLTPADDPQK-------VINRVVEVTLKDITGDFTKGH 64
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ +
Sbjct: 65 VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMA 124
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR+ M+EI+ +A + K V + + I EI K
Sbjct: 125 IAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEA 175
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 176 KKIYPLKKAEIRKIKVLGEP 195
>gi|380495013|emb|CCF32714.1| 40S ribosomal protein S1 [Colletotrichum higginsianum]
Length = 89
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EI+ +A++C L L K I EVIGREIEK+T IYPLQNV IRKVK+LK PKFDLG
Sbjct: 1 MTEIIQREASTCTLTQLTSKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKQPKFDLGA 60
Query: 208 LMEVHGDY-SEDVGVKVDRPADEPIPE 233
LM +HG+ ++D G KV+R E + E
Sbjct: 61 LMGLHGESGTDDQGQKVEREFKERVLE 87
>gi|288932826|ref|YP_003436886.1| ribosomal protein S3Ae [Ferroglobus placidus DSM 10642]
gi|288895074|gb|ADC66611.1| ribosomal protein S3Ae [Ferroglobus placidus DSM 10642]
Length = 211
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 18/202 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
D +A K W+ + AP F VG T + E + R E++L +L N+ ++
Sbjct: 11 DKWASKKWFTLIAPEYFGYAEVGYTPAD-------SEEKVIGRTVEITLAELTNDYSNQN 63
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
Y+K++ + V G+N T F D L SL R+ + IE VDV T D + LR+
Sbjct: 64 PYKKLKFKVYKVAGENAYTKFHEFELMRDYLNSLTRRRTSKIEDIVDVTTADGYKLRVKS 123
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FT VKR C Q+SQ R IR+ MREI+ A+ +++ + I EI K
Sbjct: 124 VAFT------VKR-C--QSSQKRAIRKIMREIVTNTASKEKFVQFLQEAVLGKIPAEIYK 174
Query: 180 ATSSIYPLQNVFIRKVKILKAP 201
IYPL+ V IRK+++L P
Sbjct: 175 NAKKIYPLRRVEIRKIELLSEP 196
>gi|282163503|ref|YP_003355888.1| 30S ribosomal protein S3Ae [Methanocella paludicola SANAE]
gi|282155817|dbj|BAI60905.1| 30S ribosomal protein S3Ae [Methanocella paludicola SANAE]
Length = 227
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F K+WY + AP+ F N+G+TL E + R+ E +LGD+ +
Sbjct: 10 DAFRAKNWYQVLAPAEFNRANIGETLAD-------MPEKMIGRIMESTLGDITGDWAKQN 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ R +++ G + T+F G T D +RSLV++ T ++A + V T D + LRL +
Sbjct: 63 TKMLFRIDEIGGNSAYTSFIGHEMTKDYMRSLVKRRTTKVDANLVVTTKDGYKLRLKPLV 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT VKR A+TSQI IR+ M ++ ++ LV + + EI KAT
Sbjct: 123 FT------VKR---ARTSQIESIRKIMVAVVASRGKELTFNELVADTVNGKVAAEIYKAT 173
Query: 182 SSIYPLQNVFIRKVKIL 198
+IYPL+ + K +++
Sbjct: 174 KNIYPLRRAEVAKSEVV 190
>gi|414865389|tpg|DAA43946.1| TPA: hypothetical protein ZEAMMB73_647157, partial [Zea mays]
Length = 64
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Query: 177 IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRP--ADEPIPE 233
IEK+TSSI+PLQNVFIRKVKIL APKFDLGKLMEVHGDY EDVGVK++RP DE + E
Sbjct: 1 IEKSTSSIFPLQNVFIRKVKILMAPKFDLGKLMEVHGDYKEDVGVKLERPVEGDEAMQE 59
>gi|197102698|ref|NP_001126750.1| 40S ribosomal protein S3a [Pongo abelii]
gi|55732532|emb|CAH92966.1| hypothetical protein [Pongo abelii]
Length = 74
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 48/52 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL 53
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADL 74
>gi|59803061|sp|Q9V2K7.2|RS3A_PYRAB RecName: Full=30S ribosomal protein S3Ae
gi|380740806|tpe|CCE69440.1| TPA: 30S ribosomal protein S3Ae [Pyrococcus abyssi GE5]
Length = 199
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F VG T E + +RV EV+L D+ + +
Sbjct: 12 DKWKLKQWYVIYAPDFFGGVEVGLTPAD-------DPEKVLNRVVEVTLKDITGDFLKGH 64
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ +
Sbjct: 65 VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMV 124
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR+ M+EI+ +A + K V + + I EI K
Sbjct: 125 IAARR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEA 175
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 176 KKIYPLKKAEIRKIKVLGEP 195
>gi|14520285|ref|NP_125760.1| 30S ribosomal protein S3Ae [Pyrococcus abyssi GE5]
gi|5457500|emb|CAB48991.1| rps3AE SSU ribosomal protein S3AE [Pyrococcus abyssi GE5]
Length = 200
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F VG T E + +RV EV+L D+ + +
Sbjct: 13 DKWKLKQWYVIYAPDFFGGVEVGLTPAD-------DPEKVLNRVVEVTLKDITGDFLKGH 65
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ +
Sbjct: 66 VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMV 125
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR+ M+EI+ +A + K V + + I EI K
Sbjct: 126 IAAR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEA 176
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 177 KKIYPLKKAEIRKIKVLGEP 196
>gi|435851963|ref|YP_007313549.1| ribosomal protein S3AE [Methanomethylovorans hollandica DSM 15978]
gi|433662593|gb|AGB50019.1| ribosomal protein S3AE [Methanomethylovorans hollandica DSM 15978]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I+ P N+G T+ E L R+ E ++GDL N+
Sbjct: 10 DKWKSKSWYNIETPEFIGRNNIGTTMAEE-------PEQLIGRIVEATVGDLTNDFSKHN 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ R D+ G T F G TTD LRS+V++ + I+ + V T D +T+R+ I
Sbjct: 63 TKLKFRINDINGDVAQTLFIGHEITTDYLRSIVKRQTSRIDTNLKVTTKDGYTVRVKPIC 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT VKR A+TSQI IR M + +A+ + + VE+ I + I +
Sbjct: 123 FT------VKR---ARTSQIEGIREVMDGTVKERASELNFEQFVEEAIMGKLSATIYRNA 173
Query: 182 SSIYPLQNVFIRKVKILKAP 201
+IYPL+ V IRK ++ P
Sbjct: 174 KNIYPLRRVEIRKTEVEGIP 193
>gi|298674185|ref|YP_003725935.1| 30S ribosomal protein S3Ae [Methanohalobium evestigatum Z-7303]
gi|298287173|gb|ADI73139.1| ribosomal protein S3Ae [Methanohalobium evestigatum Z-7303]
gi|452077273|gb|AGF93237.1| 30S ribosomal protein S3Ae [uncultured organism]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY+I+ P +G VT + TK L RV E ++G L N+
Sbjct: 10 DKWKSKNWYNIEPPEFLSSSYIG---VTPAENTK----DLLGRVVETTVGQLTNDITKEK 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+RL+ ++V G + T F G TTD LRS+V++ + I+ V V T D +R+ I
Sbjct: 63 TKLRLQIDNVVGDSAKTRFIGHEITTDYLRSIVKRQTSRIDNNVVVTTNDGNKVRVKPIC 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT VKR A +SQI+ IR+ M++++ A+A+ D +++ I+ + I + T
Sbjct: 123 FT------VKR---AHSSQIKAIRKVMKDVVKARASEVDYGQFIDEAISGKLAANIYRNT 173
Query: 182 SSIYPLQNVFIRKVKILKAP 201
+YP++ IRK ++ P
Sbjct: 174 KKVYPIRRAEIRKTEVQAEP 193
>gi|11499901|ref|NP_071145.1| 30S ribosomal protein S3Ae [Archaeoglobus fulgidus DSM 4304]
gi|6647802|sp|O27964.1|RS3A_ARCFU RecName: Full=30S ribosomal protein S3Ae
gi|2648199|gb|AAB88936.1| SSU ribosomal protein S3AE (rps3AE) [Archaeoglobus fulgidus DSM
4304]
Length = 211
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
D + K W+ + AP F + +G+T +K+ R E +L +L N+ ++
Sbjct: 12 DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVVG-----RTVETTLAELTNDYSNQN 64
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
Y+K+ + V G N T FW T + L SL R+ + IE VDV T D + LR+
Sbjct: 65 TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKS 124
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FT R C +TSQ R IR MR+I+V +A+S + +++ + + EI K
Sbjct: 125 VVFT-------VRRC--KTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYK 175
Query: 180 ATSSIYPLQNVFIRKVKILKAP 201
IYP++ V IRK+++L P
Sbjct: 176 NAKKIYPIRRVEIRKIELLAEP 197
>gi|337284962|ref|YP_004624436.1| 30S ribosomal protein S3Ae [Pyrococcus yayanosii CH1]
gi|334900896|gb|AEH25164.1| 30S ribosomal protein S3Ae [Pyrococcus yayanosii CH1]
Length = 199
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F + +G T E + RV EV+L DL + +
Sbjct: 13 DKWKLKQWYIIYAPDFFGGQEIGLTPAD-------DPEKVIGRVVEVTLKDLTGDFTKGH 65
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G +RSLVR+ T I+ ++ T D + LR+ +
Sbjct: 66 VKLYFQVYDVKGQNAYTKFKGHKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMGMA 125
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR+ M+EI+ +A + K + + + + EI +
Sbjct: 126 IAMRR---------IQTSQERAIRKIMQEIIYRKAEELNFKDFILEAVTGKMAEEIAREA 176
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 177 KKIYPLKRAEIRKIKVLAEP 196
>gi|444710992|gb|ELW51951.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 194
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 129 QVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQ 188
++++T YAQ Q+RQIRRKM EIM + + DLK +V K I + IG++IEKA SIYPL
Sbjct: 70 EIRKTSYAQHQQVRQIRRKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKAYQSIYPLH 129
Query: 189 NVFIRKVKILKAPKFDLG 206
VF+RKVK+LK PK +LG
Sbjct: 130 VVFVRKVKMLKKPKSELG 147
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF+K DWYD+KAP+ F +RN+ KT+V RTQGTKIAS+GLK RVF + +
Sbjct: 23 DPFSKTDWYDVKAPAMFNIRNIRKTVVIRTQGTKIASDGLKGRVFVFEIRKTSYAQHQQV 82
Query: 62 RKIRLRAEDVQGKNVLTN 79
R+IR + ++ + V TN
Sbjct: 83 RQIRRKMMEIMTREVQTN 100
>gi|444720953|gb|ELW61713.1| T-complex protein 1 subunit zeta-2 [Tupaia chinensis]
Length = 485
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%)
Query: 140 QIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 199
Q+RQIR+KM EIM +A S DLK +V K + I ++IE + SIYPL NVFIRKVK+LK
Sbjct: 383 QVRQIRKKMMEIMTQEAHSNDLKEVVNKLFPDSIRKDIEMSYQSIYPLHNVFIRKVKMLK 442
Query: 200 APKFDLGKLMEVHGD 214
P+F+LGKLME++G+
Sbjct: 443 KPRFELGKLMELYGE 457
>gi|284161910|ref|YP_003400533.1| 30S ribosomal protein S3Ae [Archaeoglobus profundus DSM 5631]
gi|284011907|gb|ADB57860.1| ribosomal protein S3Ae [Archaeoglobus profundus DSM 5631]
Length = 211
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 18/203 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
D ++ K WY + AP F + +G+T +K+ +R EV+L +L N+ ++
Sbjct: 10 DKWSMKKWYTLIAPEYFGLAEIGETPAD--DPSKVI-----NRTVEVTLAELTNDYSNQN 62
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
Y+K+ + V G+N T F + + SL+R+ + I+ +DV T D + LR+
Sbjct: 63 PYKKLIFKVYRVSGENAYTKFHRFEMMREYINSLIRRRTSKIDDVIDVTTADGYVLRVKP 122
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FT VKR +Q S IR+I MREI++ A+ + +++ I I EI K
Sbjct: 123 VAFT------VKRCKTSQKSAIRKI---MREIIINNASQKNFVQFLQECILGRIPSEIYK 173
Query: 180 ATSSIYPLQNVFIRKVKILKAPK 202
IYPL+ V IRK+++L PK
Sbjct: 174 NAKKIYPLRRVEIRKIELLAEPK 196
>gi|147919550|ref|YP_686710.1| 30S ribosomal protein S3Ae [Methanocella arvoryzae MRE50]
gi|110622106|emb|CAJ37384.1| 30S ribosomal protein S3AE [Methanocella arvoryzae MRE50]
Length = 225
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D F K+WY + AP+ F N+G+TL G I RV E +LGD+ +
Sbjct: 10 DAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMIG------RVMESTLGDVTGDWTKQN 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ R E++ G + T+F G T D +RSLV++ + I+A V V T D F +R+ I
Sbjct: 63 IKMIFRIEEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIV 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T VKR A+TSQI IR+ M ++ + A + + + + EI K T
Sbjct: 123 LT------VKR---ARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIYKNT 173
Query: 182 SSIYPLQNVFIRKVKIL 198
+IYPL+ V I K +++
Sbjct: 174 KNIYPLRRVEIGKSELV 190
>gi|18314093|ref|NP_560760.1| 30S ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
gi|21263991|sp|Q8ZT21.1|RS3A_PYRAE RecName: Full=30S ribosomal protein S3Ae
gi|18161677|gb|AAL64942.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 221
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+A K W+ + APS G + + ++ L R EVSL D+ + H
Sbjct: 20 DPWALKKWFSVYAPSYL-----GGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + V+G LT F G+ T D +RSLVRK + + A +VKT D +R+ +G
Sbjct: 73 IKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T T T+Q +R+KM E +V +AA D +++ + + ++
Sbjct: 133 IT---------THRIGTAQKSAMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVA 183
Query: 182 SSIYPLQNVFIRKVKILKAP 201
I P++ V I K+K+LK P
Sbjct: 184 KKIAPMRKVEIAKIKVLKYP 203
>gi|327310278|ref|YP_004337175.1| 30S ribosomal protein S3Ae [Thermoproteus uzoniensis 768-20]
gi|326946757|gb|AEA11863.1| 30S ribosomal protein S3Ae [Thermoproteus uzoniensis 768-20]
Length = 221
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D +A K WY AP V + + Q L R E+S ++ + H
Sbjct: 20 DVWASKKWYTAYAPVYLGGAAVAEVPASEPQK-------LLGRTLEISYFEITKDISHLP 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
KIRL+ V G N T F G+ + D +RSLVR+ + AYVDV T D + LRL +G
Sbjct: 73 IKIRLQINKVDGDNAYTRFKGLELSRDYIRSLVRRGTSKSVAYVDVTTKDGWRLRLTVLG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T + TS+ IR+ ++ +A + D+ SL+++ + + E+ A
Sbjct: 133 IT---------SASVSTSRKSAIRKAFASLLAQKAPALDIGSLLKEVLEGTLAAELFVAA 183
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
+YP++ V I K+K+L PK
Sbjct: 184 KKVYPMRKVEIAKIKVLAFPK 204
>gi|22759731|dbj|BAC10914.1| putative 40S ribosomal protein S3A [Zinnia elegans]
Length = 66
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 42/45 (93%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVF 46
DPFAKKDWYDIKAPS F RNVGKTLVTRTQGTKIASEGLKHRVF
Sbjct: 22 DPFAKKDWYDIKAPSLFSTRNVGKTLVTRTQGTKIASEGLKHRVF 66
>gi|390960335|ref|YP_006424169.1| 30S ribosomal protein S3Ae [Thermococcus sp. CL1]
gi|390518643|gb|AFL94375.1| 30S ribosomal protein S3Ae [Thermococcus sp. CL1]
Length = 200
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY + AP F + +G T E + RV E +L DL +
Sbjct: 15 DKWKSKEWYIVYAPDFFGSKEIGLTPADE-------PEKVIGRVIETTLKDLTGDFTKGQ 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G + +RSLVR+ T ++ ++ T D + LR+ +
Sbjct: 68 VKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR +R+I+ +A D K V + ++ + EI K
Sbjct: 128 IAYRR---------IQTSQERAIREIIRDIIYKKAEELDFKDFVLEAVSGKMAAEIAKEA 178
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ IRK+K+L P
Sbjct: 179 RKIYPIKRAEIRKIKVLAEP 198
>gi|374326136|ref|YP_005084336.1| 30S ribosomal protein S3Ae [Pyrobaculum sp. 1860]
gi|356641405|gb|AET32084.1| 30S ribosomal protein S3Ae [Pyrobaculum sp. 1860]
Length = 235
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+A K W+++ APS G LV ++ + L R E+SL D+ + H
Sbjct: 33 DPWALKKWFNVHAPSYM-----GGVLVAEVPASE--PQKLLMRTLEISLYDVTKDISHLP 85
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+R + V+G LT F G+ T D +RSLVR+ + + A +V+T D +R+ +G
Sbjct: 86 IKLRFQIHRVEGLRALTRFKGLELTRDYIRSLVRRGTSKVTAITEVRTKDGMVMRVTVMG 145
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R AQ S +RQ ++ E + +AA D+ +++ + ++ A
Sbjct: 146 IT------THRVGTAQKSAMRQ---RIVETLTKKAAEMDVGQFLKEVTEGTLAADLFIAA 196
Query: 182 SSIYPLQNVFIRKVKILKAP 201
I P++ V + K+K+LK P
Sbjct: 197 KKIAPMRKVEVAKIKVLKYP 216
>gi|390939132|ref|YP_006402870.1| 30S ribosomal protein S3Ae [Desulfurococcus fermentans DSM 16532]
gi|390192239|gb|AFL67295.1| ribosomal protein S3Ae [Desulfurococcus fermentans DSM 16532]
Length = 213
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY++ AP+ F +G T E L RV E +L D+ + +
Sbjct: 11 DKWKMKKWYEVVAPTSFGGITLGSTPAD-------DPEKLIGRVIETTLYDITGDITQVH 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + V G LT F G D +RSLVR+ + I+ D+ T D + LR+ +
Sbjct: 64 VKLYFQVISVDGNKALTRFKGHELARDYMRSLVRRKSSKIQGIFDITTKDGYVLRVTIVA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T N TSQ + IRR MRE + +A+ L LV++ ++ I EI +
Sbjct: 124 LTSYRCN---------TSQKKAIRRVMREYIFKKASELTLDELVQEIMSYKISNEIAELA 174
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ V + K K+L P
Sbjct: 175 RKIYPIRRVEVYKTKLLLIP 194
>gi|433637824|ref|YP_007283584.1| ribosomal protein S3AE [Halovivax ruber XH-70]
gi|448374705|ref|ZP_21558495.1| 30S ribosomal protein S3Ae [Halovivax asiaticus JCM 14624]
gi|433289628|gb|AGB15451.1| ribosomal protein S3AE [Halovivax ruber XH-70]
gi|445659831|gb|ELZ12633.1| 30S ribosomal protein S3Ae [Halovivax asiaticus JCM 14624]
Length = 213
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T +E + R + +LGDL N K+
Sbjct: 12 EKRWYTVLAPEMFDRTELGETPADE-------AEQVYDRTIDTTLGDLTNNASENNIKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
R DV + T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FRITDVGSDSAYTEFVEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ + AA + LV+ + + I +IY
Sbjct: 123 -------TKSADASQEQAIREQMVEMVESAAADRTFEELVDSIVHGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V ++K ++ P+
Sbjct: 176 PLRRVEVQKTTLVAHPE 192
>gi|73669623|ref|YP_305638.1| 30S ribosomal protein S3 [Methanosarcina barkeri str. Fusaro]
gi|121698712|sp|Q46AN4.1|RS3A_METBF RecName: Full=30S ribosomal protein S3Ae
gi|72396785|gb|AAZ71058.1| SSU ribosomal protein S3AE [Methanosarcina barkeri str. Fusaro]
Length = 207
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 16/196 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY+I+AP+ VG T+ L R E ++G+L N+
Sbjct: 11 DGWKSKEWYNIEAPAYLNRAIVGNTMAG-------DPSLLVGRNIETTVGELTNDMTKNN 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ LR +V G T+ G TTD +RS+V++ + I+A +DVKT D + +R+
Sbjct: 64 TKVILRINNVVGDVATTDLMGHELTTDYIRSIVKRQTSRIDANIDVKTKDGYIIRVKPTC 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT +KR A++SQI+ IR M I+ +A+ D ++ +++ I + I +
Sbjct: 124 FT------IKR---ARSSQIKAIREMMVNIVAKRASEADFETFMQEAILGRLSAAIYRQA 174
Query: 182 SSIYPLQNVFIRKVKI 197
IYPL+ V IRK ++
Sbjct: 175 KFIYPLRRVEIRKTQV 190
>gi|395831527|ref|XP_003788852.1| PREDICTED: 40S ribosomal protein S3a-like [Otolemur garnettii]
Length = 105
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%)
Query: 83 MSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIR 142
M T DK+ S+V+KW +IEA+VDVK T + L LFC+ FTKR +Q+++T YAQ Q+
Sbjct: 6 MDLTHDKMCSVVKKWQIVIEAHVDVKATCGYLLHLFCVDFTKRCSSQIRKTSYAQYQQVH 65
Query: 143 QIRRKMREIMVAQAASCDLKSLVEKFIAEVIG 174
QI +K EIM + D K +V K + E++G
Sbjct: 66 QIWKKRMEIMTRELQKNDFKEVVNKLVKELLG 97
>gi|218884646|ref|YP_002429028.1| 30S ribosomal protein S3Ae [Desulfurococcus kamchatkensis 1221n]
gi|254764501|sp|B8D6D0.1|RS3A_DESK1 RecName: Full=30S ribosomal protein S3Ae
gi|218766262|gb|ACL11661.1| 30S ribosomal protein S3Ae [Desulfurococcus kamchatkensis 1221n]
Length = 213
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY++ AP+ F +G T E L RV E +L D+ + +
Sbjct: 11 DKWKMKKWYEVVAPTSFGGITLGSTPAD-------DPEKLIGRVIETTLYDITGDITQVH 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + + G LT F G D +RSLVR+ + I+ D+ T D + LR+ +
Sbjct: 64 VKLYFQIISIDGNKALTRFKGHELARDYMRSLVRRKSSKIQGIFDINTKDGYVLRVTIVA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T N TSQ + IRR MRE + +A+ L LV++ ++ I EI +
Sbjct: 124 LTSYRCN---------TSQKKAIRRVMREYIFKKASELTLDELVQEIMSYKISNEIAELA 174
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ V + K K+L P
Sbjct: 175 RKIYPIRRVEVYKTKLLLIP 194
>gi|432093075|gb|ELK25365.1| 40S ribosomal protein S3a [Myotis davidii]
Length = 97
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGK
Sbjct: 1 MMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGK 60
Query: 208 LMEVHGDYS-------EDVGVKVDR 225
LME+HG+ S ++ G KV+R
Sbjct: 61 LMELHGEGSSSGKATGDETGAKVER 85
>gi|161484933|ref|NP_618303.2| 30S ribosomal protein S3Ae [Methanosarcina acetivorans C2A]
gi|48474510|sp|Q8TKI9.2|RS3A_METAC RecName: Full=30S ribosomal protein S3Ae
Length = 203
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 16/196 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY+I+AP VG T+ L R E ++G+L N+
Sbjct: 11 DGWKSKEWYNIEAPVYLNRAIVGNTMAG-------DPSLLVGRNVETTVGELTNDMTKNN 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ LR +V G T+ G TTD +RS+V++ + I+A VDVKT D + +R+
Sbjct: 64 TKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTC 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT +KR A++SQ++ IR M EI+ +AA D ++ +++ I + I +
Sbjct: 124 FT------IKR---ARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQA 174
Query: 182 SSIYPLQNVFIRKVKI 197
IYPL+ V IRK ++
Sbjct: 175 KFIYPLRRVEIRKTEV 190
>gi|315230662|ref|YP_004071098.1| 30S ribosomal protein S3Ae [Thermococcus barophilus MP]
gi|315183690|gb|ADT83875.1| SSU ribosomal protein S3Ae [Thermococcus barophilus MP]
Length = 200
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY + AP F + +G T E +K RV E +L DL + +
Sbjct: 15 DKWKLKQWYIVYAPEFFGSQEIGLTPAD-------DPEKVKGRVIETTLKDLTGDFTKGH 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G +RSLVR+ T I+ +V T D + LR+ +
Sbjct: 68 VKLYFQIYDVKGQNAYTKFKGHKLARSYIRSLVRRRTTRIDGIFNVTTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR MR I+ +A V + + + EI K
Sbjct: 128 IAIRR---------IQTSQERAIREIMRNIIYKKAEELPFTQFVLEAVTGKMASEIAKEA 178
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 179 KKIYPLKRAEIRKIKVLAEP 198
>gi|126459795|ref|YP_001056073.1| 30S ribosomal protein S3Ae [Pyrobaculum calidifontis JCM 11548]
gi|166226776|sp|A3MVE0.1|RS3A_PYRCJ RecName: Full=30S ribosomal protein S3Ae
gi|126249516|gb|ABO08607.1| SSU ribosomal protein S3AE [Pyrobaculum calidifontis JCM 11548]
Length = 222
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+A K W+ + AP G + + ++ L R EV+L D+ + H
Sbjct: 20 DPWALKKWFSVYAPPYL-----GGVFLAEVPAAE--AQKLVKRTLEVTLYDITKDISHLP 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+R + V G N T F G+ T D LRSL+R+ + I A DVKT D + +R+ +G
Sbjct: 73 IKLRFQIHRVDGLNASTRFKGLELTRDYLRSLIRRGTSKIMAITDVKTKDGWVMRVAVLG 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T T T+Q IR++ E++ +AA D+ +++ + + ++ A
Sbjct: 133 VT---------THRVGTAQKSAIRKRFIEVVTKKAAEADIGQFLKEVLEGTLAADLFIAG 183
Query: 182 SSIYPLQNVFIRKVKILKAP 201
I P++ V + K+K+L+ P
Sbjct: 184 KKIAPMRKVEVAKIKVLRYP 203
>gi|327400679|ref|YP_004341518.1| 30S ribosomal protein S3Ae [Archaeoglobus veneficus SNP6]
gi|327316187|gb|AEA46803.1| 30S ribosomal protein S3Ae [Archaeoglobus veneficus SNP6]
Length = 213
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEH 59
D + K WY + AP F + VG+T +K+ R E++L +L+N+ ++
Sbjct: 12 DKWTLKKWYTLIAPEYFGMAEVGETPAD--DPSKVVG-----RTVEITLAELINDYSNQN 64
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
Y+K+ + V N T F T D L SLV++ + IE +DV T D + LR+
Sbjct: 65 PYKKLIFKVHRVASDNAYTKFHRFELTRDYLNSLVKRRTSKIEDVIDVTTADGYVLRVKP 124
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ FT +KR ++SQ R IR MRE ++ + +++ + I EI K
Sbjct: 125 VAFT------IKR---CKSSQKRAIRAVMRETVMQFGTQENFVQFLQECVLGKIPSEIYK 175
Query: 180 ATSSIYPLQNVFIRKVKILKAPK 202
+YPL+ V IRK+++LK PK
Sbjct: 176 RAKKVYPLRRVEIRKIELLKEPK 198
>gi|320101510|ref|YP_004177102.1| 30S ribosomal protein S3AE [Desulfurococcus mucosus DSM 2162]
gi|319753862|gb|ADV65620.1| SSU ribosomal protein S3AE [Desulfurococcus mucosus DSM 2162]
Length = 215
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K W+++ AP+ ++G T E L RV E +L D+ + +
Sbjct: 11 DKWKIKKWFEVVAPASLGGVSLGTTPAD-------MPEKLIGRVIETTLYDITGDITQVH 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ L+ V+G +T F G D +RSL+R+ + I+ DV T D + LRL +
Sbjct: 64 VKLYLQVVSVEGNKAVTRFKGHELARDYMRSLIRRKSSKIQGIFDVTTKDGYILRLTIVA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T + +TSQ R IRR MR+ + +A L L+++ ++ + EI +
Sbjct: 124 LT---------SYRCKTSQKRAIRRVMRDYIYKKAGELTLDELIQEIMSYKVSNEISELA 174
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ V + K K+L P
Sbjct: 175 RKIYPIRRVEVYKSKLLMVP 194
>gi|341581596|ref|YP_004762088.1| 30S ribosomal protein S3Ae [Thermococcus sp. 4557]
gi|340809254|gb|AEK72411.1| 30S ribosomal protein S3Ae [Thermococcus sp. 4557]
Length = 200
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY + AP F + +G T E + RV E +L DL +
Sbjct: 15 DKWKSKEWYIVYAPDFFGSKEIGLTPADE-------PEKVIGRVIETTLKDLTGDFTKGQ 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G + + +RSLVR+ T ++ +V T D + LR+ +
Sbjct: 68 VKLYFQVYDVKGQNAYTKFKGHTLSRSYIRSLVRRRTTRVDGIYNVTTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR +R+I+ +A + K V + ++ + E+ K
Sbjct: 128 IAYRR---------IQTSQERAIREIIRDIIYKKAEELNYKDFVLEAVSGKMAAEMAKEA 178
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ IRK+K+L P
Sbjct: 179 RKIYPIKRAEIRKIKVLAEP 198
>gi|389860723|ref|YP_006362963.1| 30S ribosomal protein S3Ae [Thermogladius cellulolyticus 1633]
gi|388525627|gb|AFK50825.1| 30S ribosomal protein S3Ae [Thermogladius cellulolyticus 1633]
Length = 212
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K W++I AP F G L T + G R E +L DL + +
Sbjct: 10 DKWKLKKWFNIVAPQSFG----GVVLATTPSDDPMKLIG---RTVETTLYDLTGDISQVH 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DVQG +T F G D +RSL+R+ + I+ DV T D + +RL +
Sbjct: 63 VKLYFQVVDVQGDQAITRFKGHELARDYMRSLIRRKSSKIQGIFDVTTKDGYVVRLTIVT 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T + TSQ + IRR MRE + +A+S L LV + + + +I + T
Sbjct: 123 LT---------SFRCNTSQKKAIRRIMREYIYEKASSLTLDELVNEILGGKVSADIAERT 173
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ V + K K+L P
Sbjct: 174 RKIYPVRRVEVYKSKLLMVP 193
>gi|291407720|ref|XP_002720217.1| PREDICTED: interleukin 1 receptor accessory protein-like 2
[Oryctolagus cuniculus]
Length = 814
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F +RN+GKTLV R QGTKI+S GLK VFEVSL DL N+E A+RK +L ED+QGKN L
Sbjct: 2 FNIRNIGKTLVVRNQGTKISSVGLKGCVFEVSLADLQNDEV-AFRKFKLITEDIQGKNCL 60
Query: 78 TNFWGMSFTTDKLRSLVRKWHTLIEAYVDVK 108
TNF M ++K L + L VK
Sbjct: 61 TNFLNMDLASEKCVPLSKNGRPLWSHLTQVK 91
>gi|336477338|ref|YP_004616479.1| 30S ribosomal protein S3Ae [Methanosalsum zhilinae DSM 4017]
gi|335930719|gb|AEH61260.1| ribosomal protein S3Ae [Methanosalsum zhilinae DSM 4017]
Length = 196
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY ++ P G+T + +T L RV E ++G+L N+
Sbjct: 10 DKWKSKQWYTLETPDFM-----GRTTIGQTPADD--PRKLVGRVIETTVGELTNDFSKHN 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++LR +DV G F G TTD LRS+V++ + I++ + V T D +R+ I
Sbjct: 63 IKLKLRIDDVVGDVAQVKFMGHEITTDYLRSIVKRQTSRIDSNLTVTTKDGIKVRVKPIC 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT VKR A++SQIR IR M +++ +A + VE+ + + I +
Sbjct: 123 FT------VKR---ARSSQIRGIRAVMEDVVRQRATEVGFEQFVEELVGGKLSASIYRNV 173
Query: 182 SSIYPLQNVFIRKVKILKAP 201
+IYP++ V IRK ++ AP
Sbjct: 174 KTIYPIRRVEIRKTEVQAAP 193
>gi|212223668|ref|YP_002306904.1| 30S ribosomal protein S3Ae [Thermococcus onnurineus NA1]
gi|226697653|sp|B6YU65.1|RS3A_THEON RecName: Full=30S ribosomal protein S3Ae
gi|212008625|gb|ACJ16007.1| SSU ribosomal protein S3AE [Thermococcus onnurineus NA1]
Length = 200
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY + AP F + +G T E + RV E +L DL +
Sbjct: 15 DKWKMKEWYVVYAPDFFGNKEIGLTPAD-------DPEKVIGRVIETTLKDLTGDFTKGQ 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G + + +RSLVR+ T ++ ++ T D + LR+ +
Sbjct: 68 VKLYFQIYDVKGQNAYTKFKGHTLSRSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR MR+I+ +A + K + + + + EI K
Sbjct: 128 IAYRR---------IQTSQERAIREIMRDIIYKKAEELNYKDFILEAVTGKMATEIAKEA 178
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ IRK+K+L P
Sbjct: 179 RKIYPIKRAEIRKIKVLAEP 198
>gi|119872283|ref|YP_930290.1| 30S ribosomal protein S3Ae [Pyrobaculum islandicum DSM 4184]
gi|166226777|sp|A1RSL5.1|RS3A_PYRIL RecName: Full=30S ribosomal protein S3Ae
gi|119673691|gb|ABL87947.1| SSU ribosomal protein S3AE [Pyrobaculum islandicum DSM 4184]
Length = 222
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+A K W+ + APS G + ++ + L R EVSL D+ + H
Sbjct: 20 DPWALKKWFSVYAPSYL-----GGVFLAEVPASE--PQKLLLRTLEVSLFDITKDLSHLP 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+R + V G +T F G+ T D +RSLVRK + + A V+VKT D + +R+ +
Sbjct: 73 IKLRFQIHKVDGLKAITRFKGLELTRDYIRSLVRKGTSKVSAIVEVKTKDGWVMRIAVLA 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R AQ S +R++M +++ +A+ D+ +++ + ++ ++ A
Sbjct: 133 IT------THRIGSAQKS---AMRKRMFDVLTRKASEMDIGQFLKEVLEGLLTADLFVAG 183
Query: 182 SSIYPLQNVFIRKVKILKAP 201
I PL+ V I K+K+LK P
Sbjct: 184 KKIAPLRKVEIAKIKVLKYP 203
>gi|410671862|ref|YP_006924233.1| 30S ribosomal protein S3Ae [Methanolobus psychrophilus R15]
gi|409170990|gb|AFV24865.1| 30S ribosomal protein S3Ae [Methanolobus psychrophilus R15]
Length = 196
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASE--GLKHRVFEVSLGDLLNEEEH 59
D + K WY+++ P N+G T A E L R+ E ++G++ N+
Sbjct: 10 DKWKSKTWYNVETPEFISRTNIGVTP---------AEEPGQLIGRIVETTVGEIANDFTK 60
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
K+ L +V G T F G TTD LRS+V++ + I+ +DV T D + +R+
Sbjct: 61 HNTKLILEINEVNGDVANTRFMGHEITTDYLRSIVKRQTSRIDTNLDVTTRDGYVIRVKP 120
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I FT VKR A+TSQI+ IR M I+V +AA + + +E+ I + I +
Sbjct: 121 ICFT------VKR---ARTSQIKSIREIMDRIVVERAAELNFEQFIEEAIMGKLSANIYR 171
Query: 180 ATSSIYPLQNVFIRKVKILKAP 201
IYPL+ V IRK ++ P
Sbjct: 172 NAKYIYPLRRVEIRKTEVKVFP 193
>gi|21226286|ref|NP_632208.1| 30S ribosomal protein S3 [Methanosarcina mazei Go1]
gi|48474497|sp|Q8Q0F2.1|RS3A_METMA RecName: Full=30S ribosomal protein S3Ae
gi|20904530|gb|AAM29880.1| SSU ribosomal protein S3AE [Methanosarcina mazei Go1]
Length = 204
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 20/198 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEG--LKHRVFEVSLGDLLNEEEH 59
D + K+WY+I+AP+ + +V GT +A + L R E ++G+L N+
Sbjct: 11 DGWKSKEWYNIEAPAYL-----NRVIV----GTTMAGDPSLLVGRNVETTVGELTNDMTK 61
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
K+ LR +V G T+ G TTD +RS+V++ + I+A VDV+T D F +R+
Sbjct: 62 NNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKP 121
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
FT +KR A++SQ++ IR M +I+ +A+ D ++ +++ I + I +
Sbjct: 122 TCFT------IKR---ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYR 172
Query: 180 ATSSIYPLQNVFIRKVKI 197
IYPL+ V IRK ++
Sbjct: 173 QAKFIYPLRRVEIRKTQV 190
>gi|223478532|ref|YP_002583261.1| 30S ribosomal protein S3Ae [Thermococcus sp. AM4]
gi|240102919|ref|YP_002959228.1| 30S ribosomal protein S3Ae [Thermococcus gammatolerans EJ3]
gi|259495235|sp|C5A552.1|RS3A_THEGJ RecName: Full=30S ribosomal protein S3Ae
gi|214033758|gb|EEB74584.1| SSU ribosomal protein S3Ae [Thermococcus sp. AM4]
gi|239910473|gb|ACS33364.1| SSU ribosomal protein S3AE (rps3AE) [Thermococcus gammatolerans
EJ3]
Length = 200
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+W+ + AP F + +G T E + RV E +L DL + +
Sbjct: 15 DKWKMKEWFVVYAPDFFGSKEIGLTPADE-------PEKVIGRVVETTLKDLTGDFTKGH 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G + +RSLVR+ T ++ ++ T D + LR+ +
Sbjct: 68 VKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IRR +++I+ +A + V + + I EI K
Sbjct: 128 IAYRR---------IQTSQERAIRRIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEA 178
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
IYP++ IRK+K+L P+
Sbjct: 179 RKIYPIKRAEIRKIKVLAEPE 199
>gi|452208805|ref|YP_007488919.1| SSU ribosomal protein S3Ae [Methanosarcina mazei Tuc01]
gi|452098707|gb|AGF95647.1| SSU ribosomal protein S3Ae [Methanosarcina mazei Tuc01]
Length = 206
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 16/196 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY+I+AP+ VG T+ L R E ++G+L N+
Sbjct: 11 DGWKSKEWYNIEAPAYLNRVIVGTTMAG-------DPSLLVGRNVETTVGELTNDMTKNN 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ LR +V G T+ G TTD +RS+V++ + I+A VDV+T D F +R+
Sbjct: 64 TKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTC 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT +KR A++SQ++ IR M +I+ +A+ D ++ +++ I + I +
Sbjct: 124 FT------IKR---ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQA 174
Query: 182 SSIYPLQNVFIRKVKI 197
IYPL+ V IRK ++
Sbjct: 175 KFIYPLRRVEIRKTQV 190
>gi|171185314|ref|YP_001794233.1| 30S ribosomal protein S3Ae [Pyrobaculum neutrophilum V24Sta]
gi|226697652|sp|B1YDC4.1|RS3A_THENV RecName: Full=30S ribosomal protein S3Ae
gi|170934526|gb|ACB39787.1| ribosomal protein S3Ae [Pyrobaculum neutrophilum V24Sta]
Length = 222
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+A K WY + APS G + + ++ L R EVSL D+ + H
Sbjct: 20 DPWALKKWYTVYAPSYL-----GGVALAEVPAAE--AQKLLLRTIEVSLYDITKDISHLP 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+R + V G T F G+ T D +RSLVRK + + A VDVKT D + +R+ +
Sbjct: 73 IKLRFQIHRVDGLKAATRFKGLELTRDYVRSLVRKGTSKVSAIVDVKTKDGWVMRISILA 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R AQ S IR+++ E + +A+ D+ +++ + + E+ A
Sbjct: 133 VT------AHRIGTAQKS---AIRKRVAEALSRKASDSDVGQFLKEVLEGSLAAELFVAG 183
Query: 182 SSIYPLQNVFIRKVKILKAP 201
I PL+ V + K+K+L+ P
Sbjct: 184 KKIAPLRKVEVAKIKVLRYP 203
>gi|57641189|ref|YP_183667.1| 30S ribosomal protein S3Ae [Thermococcus kodakarensis KOD1]
gi|73918001|sp|Q5JGM4.1|RS3A_PYRKO RecName: Full=30S ribosomal protein S3Ae
gi|57159513|dbj|BAD85443.1| SSU ribosomal protein S3AE [Thermococcus kodakarensis KOD1]
Length = 200
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY + AP F + +G T E + RV E +L DL + +
Sbjct: 15 DKWKMKEWYIVYAPDFFGSKEIGLTPAD-------DPEKVIGRVIETTLKDLTGDFTKGH 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G + +RSLVR+ T ++ ++ T D + LR+ +
Sbjct: 68 VKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R QTSQ R IR+ +++I+ +A + V + + I EI K
Sbjct: 128 IAYRR---------IQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEA 178
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ +RK+K+L P
Sbjct: 179 RKIYPIKRAEVRKIKVLAEP 198
>gi|444730857|gb|ELW71230.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 258
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 18 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVL 77
F VRN GKTLVTRTQGT AS+G K RVFEVS D + ++ A+RK +L ED QGK+ L
Sbjct: 2 FNVRNTGKTLVTRTQGTSTASDGRKGRVFEVSPAD-VQSDDVAFRKFKLNTEDAQGKDCL 60
Query: 78 TNFWGMSFTTDKL 90
TNF GM T DK+
Sbjct: 61 TNFHGMGLTRDKM 73
>gi|312136361|ref|YP_004003698.1| 30S ribosomal protein S3ae [Methanothermus fervidus DSM 2088]
gi|311224080|gb|ADP76936.1| SSU ribosomal protein S3AE [Methanothermus fervidus DSM 2088]
Length = 197
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY I +P F + +G T + + + +R E ++ +L + Y
Sbjct: 11 DTWKEKKWYTILSPKYFGEKEIGLTPAR-------SPDLVVNRTVEATVRELTGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ R DV G T + G TTD +RSL+R+ + ++A V V T D + ++++ +
Sbjct: 64 MKLKFRINDVTGDVAKTKYIGHEMTTDYVRSLIRRGTSRVDAPVIVNTKDGYKIKVYTLI 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R RT +TSQ R+IRR +E ++ AA L+ ++ I I E++++
Sbjct: 124 ITAR------RT---KTSQQREIRRIAQEKVLELAAERTLEEFIKDMIDGKISSEVQESA 174
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
IYP++ V I K K+L P+
Sbjct: 175 KVIYPIRRVEIIKTKVLSEPE 195
>gi|431904461|gb|ELK09844.1| 40S ribosomal protein S3a [Pteropus alecto]
Length = 133
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 10/109 (9%)
Query: 132 RTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVF 191
R + Q+ QI++KM EIM + + DLK +V K I + +G++IE A SIY L +VF
Sbjct: 25 RRSLMLSQQVHQIQKKMMEIMTREVQTNDLKEVVNKLIPDSLGKDIEIACQSIYLLYDVF 84
Query: 192 IRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDRPAD--EPI 231
+RKVK+LK PKF+LGKLM++H + S ++ G KV+R AD EP+
Sbjct: 85 VRKVKMLKKPKFELGKLMKLHDEGSNSGKATGDETGAKVER-ADGYEPL 132
>gi|444722429|gb|ELW63126.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 110
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EIM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGK
Sbjct: 1 MMEIMTWEGQTNDLKEVVNKVIPDGTGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGK 60
Query: 208 LMEVHGDYS-------EDVGVKVDRPAD 228
LME+HG+ S ++ G KV++ D
Sbjct: 61 LMELHGEGSSSGKAIGDETGAKVEQLMD 88
>gi|444721928|gb|ELW62635.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 159
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 45/51 (88%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGD 52
DPF+KKDWYD+KAP+ F +RN+GKTLVTRTQGTKIA +GLK RVFE+ + D
Sbjct: 23 DPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIAFDGLKGRVFELDVAD 73
>gi|307596086|ref|YP_003902403.1| 30S ribosomal protein S3Ae [Vulcanisaeta distributa DSM 14429]
gi|307551287|gb|ADN51352.1| ribosomal protein S3Ae [Vulcanisaeta distributa DSM 14429]
Length = 222
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K W+ + AP+ F +G+ L R EV+L D+ + H + K+R
Sbjct: 15 KKWFTVYAPALFNGIELGEVPANE-------PNALIGRTIEVTLFDITRDLSHLHIKLRF 67
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ + ++G+ T F GM T D ++SL+R+ +LI+ D+ TTDN LR+ + T
Sbjct: 68 QIDRIEGERTYTRFKGMELTRDYVKSLIRRGSSLIQLIQDINTTDNALLRVTVLAMT--- 124
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
P + K +SQ R IR++ + + A+ D ++ + + ++ IYP
Sbjct: 125 PTRCK------SSQKRAIRKEFSKTLNEIASKVDFNGFIKAAVFGDVSNQLFAVGKKIYP 178
Query: 187 LQNVFIRKVKILKAP 201
L+ V + K+K+L+ P
Sbjct: 179 LRKVEVYKIKVLRYP 193
>gi|242399246|ref|YP_002994670.1| 30S ribosomal protein S3Ae [Thermococcus sibiricus MM 739]
gi|259495236|sp|C6A3X6.1|RS3A_THESM RecName: Full=30S ribosomal protein S3Ae
gi|242265639|gb|ACS90321.1| 30S ribosomal protein S3Ae [Thermococcus sibiricus MM 739]
Length = 200
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + KDWY + AP F +G T E +K R+ E +L D+ + +
Sbjct: 15 DKWKLKDWYIVYAPEFFGNVEIGLTPADE-------PEKVKGRIIETTLRDVTGDFTKGH 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ R DV+G+N T F G +RSLVR+ T I+ +V T D + LR+ +
Sbjct: 68 VKLYFRIHDVKGQNAYTKFKGHKLARSYIRSLVRRRTTRIDGIFNVTTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
R Q+SQ R +R M +++ +A V + + +G E+ +
Sbjct: 128 IAIR---------RIQSSQERAVREVMEDLIRKKAEELTFTEFVLEAVNGKMGAELAREA 178
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 179 KKIYPLKRAEIRKIKVLAEP 198
>gi|269867230|ref|XP_002652527.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220062295|gb|EED41529.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 232
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 9/201 (4%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----H 59
F+K +Y++ + F + N G T + + + + L R F V+ GDL + +
Sbjct: 8 FSKNKFYNLTS-RLFPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVN 66
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 67 SPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFV 126
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
TK+ P+ +K YA+ S+I+ IR+++ E + +++ LV+ E + +E E
Sbjct: 127 NAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTEGLAKEFE 184
Query: 179 KATSSIYPLQNVFIRKVKILK 199
+ IYP+ + I KVK +K
Sbjct: 185 TRCNEIYPIFAMII-KVKPIK 204
>gi|269866604|ref|XP_002652329.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220062724|gb|EED41728.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 232
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 9/201 (4%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----H 59
F+K +Y++ + F + N G T + + + + L R F V+ GDL + +
Sbjct: 8 FSKNKFYNLTS-RLFPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVN 66
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 67 SPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFV 126
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
TK+ P+ +K YA+ S+I+ IR+++ E + +++ LV+ E + +E E
Sbjct: 127 NAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTEGLAKEFE 184
Query: 179 KATSSIYPLQNVFIRKVKILK 199
+ IYP+ + I KVK +K
Sbjct: 185 TRCNEIYPIFAMII-KVKPIK 204
>gi|269863270|ref|XP_002651160.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|269865175|ref|XP_002651831.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|269865616|ref|XP_002651986.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|269969580|sp|B7XMD2.1|RS3A_ENTBH RecName: Full=40S ribosomal protein S1
gi|220063367|gb|EED42069.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220063796|gb|EED42226.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220065028|gb|EED42895.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 252
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 9/201 (4%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----H 59
F+K +Y++ + F + N G T + + + + L R F V+ GDL + +
Sbjct: 28 FSKNKFYNLTS-RLFPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVN 86
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 87 SPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFV 146
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
TK+ P+ +K YA+ S+I+ IR+++ E + +++ LV+ E + +E E
Sbjct: 147 NAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTEGLAKEFE 204
Query: 179 KATSSIYPLQNVFIRKVKILK 199
+ IYP+ + I KVK +K
Sbjct: 205 TRCNEIYPIFAMII-KVKPIK 224
>gi|267823067|gb|ACY79568.1| ribosomal protein S3A [Plutella xylostella]
Length = 72
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 42/50 (84%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLG 51
DPF +KDWYD+KAPS F R VG TLV RTQGTKIASEGLK+RVFEVSL
Sbjct: 23 DPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKNRVFEVSLA 72
>gi|433591975|ref|YP_007281471.1| ribosomal protein S3AE [Natrinema pellirubrum DSM 15624]
gi|448334311|ref|ZP_21523489.1| 30S ribosomal protein S3Ae [Natrinema pellirubrum DSM 15624]
gi|448382747|ref|ZP_21562242.1| 30S ribosomal protein S3Ae [Haloterrigena thermotolerans DSM 11522]
gi|433306755|gb|AGB32567.1| ribosomal protein S3AE [Natrinema pellirubrum DSM 15624]
gi|445620197|gb|ELY73703.1| 30S ribosomal protein S3Ae [Natrinema pellirubrum DSM 15624]
gi|445661216|gb|ELZ14007.1| 30S ribosomal protein S3Ae [Haloterrigena thermotolerans DSM 11522]
Length = 206
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LGDL N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGDLNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDSAYTEFVEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ A + LV+ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVEMIEEAAEERSFEELVDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|375083445|ref|ZP_09730466.1| 30S ribosomal protein S3Ae [Thermococcus litoralis DSM 5473]
gi|374741844|gb|EHR78261.1| 30S ribosomal protein S3Ae [Thermococcus litoralis DSM 5473]
Length = 200
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K+WY + AP F + +G T E +K RV E +L DL +
Sbjct: 15 DKWKLKNWYIVYAPEFFGSKEIGLTPAD-------DPEKVKGRVIETTLKDLTGDFTKGQ 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + DV+G+N T F G +RSLVR+ T I+ ++ T D + LR+ +
Sbjct: 68 VKLYFQIYDVKGQNAYTKFKGHKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMGMV 127
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
++R QTSQ R IR M I+ +A + V + + + EI +
Sbjct: 128 IA------IRRI---QTSQERAIREIMENIIRKKAEELNFTDFVLEAVNGKMAAEIAREA 178
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ IRK+K+L P
Sbjct: 179 KKIYPLKRAEIRKIKVLAEP 198
>gi|448411606|ref|ZP_21576007.1| 30S ribosomal protein S3Ae [Halosimplex carlsbadense 2-9-1]
gi|445670178|gb|ELZ22782.1| 30S ribosomal protein S3Ae [Halosimplex carlsbadense 2-9-1]
Length = 216
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 22/225 (9%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLK--HRVFEVSLGDLLNEEEHAYRK 63
+K WY + AP F +G+T +A E K R E +LGDL NE K
Sbjct: 12 EKRWYTLIAPEQFDREELGET---------VADEPDKVLGRTIETTLGDLRNEASENNTK 62
Query: 64 IRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFT 123
+ + +V + T F T D LRSLVR+ + IEAY+ V T D++ +++ + T
Sbjct: 63 LTFKVNEVASDSAYTEFIKHELTRDYLRSLVRRGSSKIEAYITVLTEDDYRVQIQPVALT 122
Query: 124 KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS 183
T A SQ + IRR+M +I+ A +V+ + + I +
Sbjct: 123 ---------TKSADESQEKAIRRQMIDIVEENARERTYAEIVDSIVEGRLSSAIYNEAKT 173
Query: 184 IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAD 228
IYPL+ V I+K+ + P+ ++ E D ED V VD AD
Sbjct: 174 IYPLRRVEIQKLTLEARPE-EVAAEEETSVDVEED-EVAVDESAD 216
>gi|448717096|ref|ZP_21702628.1| 30S ribosomal protein S3Ae [Halobiforma nitratireducens JCM 10879]
gi|445786055|gb|EMA36828.1| 30S ribosomal protein S3Ae [Halobiforma nitratireducens JCM 10879]
Length = 213
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E L R E +LGDL K+
Sbjct: 12 EKRWYTVLAPEQFDREELGETPADE-------PEKLYDRTIETTLGDLKGAASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKINDVGSDTAYTEFQQHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M ++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVTMVEEAAAERTFEELIDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V I+K + P+
Sbjct: 176 PLRRVEIQKATLEAHPE 192
>gi|448395795|ref|ZP_21568889.1| 30S ribosomal protein S3Ae [Haloterrigena salina JCM 13891]
gi|445660376|gb|ELZ13172.1| 30S ribosomal protein S3Ae [Haloterrigena salina JCM 13891]
Length = 212
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + +EAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDSAYTEFVEHSLTRDYLRSLVRRGASKVEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRNQMVEMIEEAAAERSFEELIDSVVEGRLSSGIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|284164680|ref|YP_003402959.1| 30S ribosomal protein S3Ae [Haloterrigena turkmenica DSM 5511]
gi|284014335|gb|ADB60286.1| ribosomal protein S3Ae [Haloterrigena turkmenica DSM 5511]
Length = 212
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + +EAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDSAYTEFVEHSLTRDYLRSLVRRGASKVEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRNQMVEMIEEAAAERSFEELIDSVVEGRLSSGIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|448319898|ref|ZP_21509386.1| 30S ribosomal protein S3Ae [Natronococcus amylolyticus DSM 10524]
gi|445606304|gb|ELY60208.1| 30S ribosomal protein S3Ae [Natronococcus amylolyticus DSM 10524]
Length = 213
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY I AP F + +G+T E + R E +LG++ N K+
Sbjct: 12 EKRWYTILAPEQFDRKELGETPADE-------PEKVYDRTIETTLGEITNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F + T D LRSLVR+ + +EAYV V TTD++ +++ + FT
Sbjct: 65 FKVTDVGSDAAYTEFQEHALTRDYLRSLVRRGASKVEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ AA L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVQMIEEAAAERTFDELIDSIVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V I+K + P+
Sbjct: 176 PLRRVEIQKTTLEAHPE 192
>gi|448359743|ref|ZP_21548392.1| 30S ribosomal protein S3Ae [Natrialba chahannaoensis JCM 10990]
gi|445641810|gb|ELY94882.1| 30S ribosomal protein S3Ae [Natrialba chahannaoensis JCM 10990]
Length = 213
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRTELGETPADE-------PEKVYDRTIETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDAAYTEFMEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ A A + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRNQMVQMIEAAAEERTFEELIDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V I+K + P+
Sbjct: 176 PLRRVEIQKATLEARPE 192
>gi|383625637|ref|ZP_09950043.1| 30S ribosomal protein S3Ae [Halobiforma lacisalsi AJ5]
gi|448695628|ref|ZP_21697453.1| 30S ribosomal protein S3Ae [Halobiforma lacisalsi AJ5]
gi|445784385|gb|EMA35198.1| 30S ribosomal protein S3Ae [Halobiforma lacisalsi AJ5]
Length = 213
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E L R E +LGDL K+
Sbjct: 12 EKRWYTVLAPEQFDREELGETPADE-------PEKLYDRTIETTLGDLKGAASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKINDVGSDTAYTEFKQHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M ++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREEMVAMVREAAAERTFEELIDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V I+K + P+
Sbjct: 176 PLRRVEIQKATLEAHPE 192
>gi|352681928|ref|YP_004892452.1| 30S ribosomal protein S3ae [Thermoproteus tenax Kra 1]
gi|350274727|emb|CCC81373.1| 30S ribosomal protein S3ae [Thermoproteus tenax Kra 1]
Length = 221
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D +A K WY + PS V + V ++ +K+ + R E+S DL + H
Sbjct: 19 DVWATKRWYTVYTPSYLGGAAVAE--VPASEASKLLA-----RTLEISFFDLTKDISHLP 71
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
KI+L+ V G N T F G+ + D LRSL+RK + + A++DV T D + LR +G
Sbjct: 72 IKIKLQINRVDGSNAYTRFKGLELSRDYLRSLIRKGTSKVVAHIDVATRDGWRLRFTILG 131
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T + +++ IR+ ++ + S D+ +L+++ + ++ A
Sbjct: 132 ITAFKTSASRKSA---------IRKAFSSVVAQKVPSLDIDALLKEVLQGAFAADLFLAA 182
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
IYP++ V + K+K+L PK
Sbjct: 183 KKIYPMRKVEVAKIKVLAYPK 203
>gi|448397640|ref|ZP_21569673.1| 30S ribosomal protein S3Ae [Haloterrigena limicola JCM 13563]
gi|445672739|gb|ELZ25310.1| 30S ribosomal protein S3Ae [Haloterrigena limicola JCM 13563]
Length = 213
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGELTNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FQVTDVGSDSAYTEFKEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ A + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVQMIEEAAEERSFEELIDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V I+K + P
Sbjct: 176 PLRRVEIQKTTLEAHP 191
>gi|409095666|ref|ZP_11215690.1| 30S ribosomal protein S3Ae [Thermococcus zilligii AN1]
Length = 198
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 8 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLR 67
+WY + AP F + +G L + K+ RV E +L D+ + + K+ +
Sbjct: 19 EWYVVYAPDFFGGKEIG--LTPADEPGKVIG-----RVIETTLKDVTGDFTKGHVKLYFQ 71
Query: 68 AEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLP 127
DV+G+N T F G +RSLVR+ T ++ +V T D + LR+ + R
Sbjct: 72 VYDVKGQNAYTKFKGHKLARSYVRSLVRRRTTRVDGIFNVTTKDGYKLRVMGLVIAYRR- 130
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
QTSQ R IRR +++I+ +A + V + + I EI K IYP+
Sbjct: 131 --------IQTSQERAIRRVIQDIIYKKAEELNFADFVLQSVNGQIANEIAKEARKIYPI 182
Query: 188 QNVFIRKVKILKAP 201
+ +RK+K+L P
Sbjct: 183 KRAEVRKIKVLAEP 196
>gi|448349581|ref|ZP_21538414.1| 30S ribosomal protein S3Ae [Natrialba taiwanensis DSM 12281]
gi|448365856|ref|ZP_21554110.1| 30S ribosomal protein S3Ae [Natrialba aegyptia DSM 13077]
gi|445639547|gb|ELY92652.1| 30S ribosomal protein S3Ae [Natrialba taiwanensis DSM 12281]
gi|445654465|gb|ELZ07316.1| 30S ribosomal protein S3Ae [Natrialba aegyptia DSM 13077]
Length = 213
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R E +LGDL N K+
Sbjct: 12 EKRWYTVLAPEQFDRTELGETPADE-------PEKVYDRTIETTLGDLNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDTAYTEFQKHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQVQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVQMVEEAAAERTFEELIDGVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|435846236|ref|YP_007308486.1| ribosomal protein S3AE [Natronococcus occultus SP4]
gi|433672504|gb|AGB36696.1| ribosomal protein S3AE [Natronococcus occultus SP4]
Length = 213
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY I AP F + +G+T E + R E +LG+L + K+
Sbjct: 12 EKRWYTIHAPEQFDRKELGETPADE-------PEKVYDRTIETTLGELTDNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F + T D LRSLVR+ + IEAYV + TTD++ +++ + FT
Sbjct: 65 FKITDVGSDAAYTEFQEHALTRDYLRSLVRRGASKIEAYVTILTTDDYRVQVQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVQMIEEAAAERTFEELIDSIVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V I+K + P+
Sbjct: 176 PLRRVEIQKTTLEAYPE 192
>gi|336254237|ref|YP_004597344.1| 30S ribosomal protein S3Ae [Halopiger xanaduensis SH-6]
gi|335338226|gb|AEH37465.1| 30S ribosomal protein S3Ae [Halopiger xanaduensis SH-6]
Length = 213
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKINDVGSDSAYTEFKEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQVQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ AA + L+ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVEMVEEAAAERTFEELISSIVEGRLSSGIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|448306261|ref|ZP_21496170.1| 30S ribosomal protein S3Ae [Natronorubrum bangense JCM 10635]
gi|445598675|gb|ELY52730.1| 30S ribosomal protein S3Ae [Natronorubrum bangense JCM 10635]
Length = 213
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDSAYTEFKEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR M E++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRETMVEMIEEAAAERSFEELIDSVVEGRLSSGIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|448301672|ref|ZP_21491663.1| 30S ribosomal protein S3Ae [Natronorubrum tibetense GA33]
gi|445583588|gb|ELY37918.1| 30S ribosomal protein S3Ae [Natronorubrum tibetense GA33]
Length = 212
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY I AP F + +G+T E + R +LG+L N K+
Sbjct: 12 EKRWYTILAPEQFDRQELGETPADE-------PEKVYDRTIVTTLGELTNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + +EAYV V TTD++ +++ + FT
Sbjct: 65 FKVTDVGSDSAYTEFVEHSLTRDYLRSLVRRGASKVEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M ++ AA D + LV+ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVAMIEEAAAERDFEELVDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|448355463|ref|ZP_21544214.1| 30S ribosomal protein S3Ae [Natrialba hulunbeirensis JCM 10989]
gi|445634991|gb|ELY88163.1| 30S ribosomal protein S3Ae [Natrialba hulunbeirensis JCM 10989]
Length = 213
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R E +LGDL N K+
Sbjct: 12 EKRWYTVLAPEQFDRTELGETPADE-------PEKVYDRTIETTLGDLNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDAAYTEFMEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ A + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRNQMVQMIEEAAEERTFEELIDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V I+K + P+
Sbjct: 176 PLRRVEIQKATLEAHPE 192
>gi|448310660|ref|ZP_21500458.1| 30S ribosomal protein S3Ae [Natronolimnobius innermongolicus JCM
12255]
gi|445607400|gb|ELY61281.1| 30S ribosomal protein S3Ae [Natronolimnobius innermongolicus JCM
12255]
Length = 214
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDAAYTEFVEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRERMVEMVEEAAADRSFEELIDGVVEGRLSSGIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|444727469|gb|ELW67960.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 158
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EIM + + +LK +V K I + IG++ EKA SI+PL + FIRKVK+LK PKF+LGK
Sbjct: 1 MMEIMTGEMQTNNLKQVVNKLIPDSIGKDTEKAHQSIHPLHDAFIRKVKMLKKPKFELGK 60
Query: 208 LMEVHGDYS 216
LME+HG+ S
Sbjct: 61 LMELHGESS 69
>gi|448328093|ref|ZP_21517408.1| 30S ribosomal protein S3Ae [Natrinema versiforme JCM 10478]
gi|445616519|gb|ELY70142.1| 30S ribosomal protein S3Ae [Natrinema versiforme JCM 10478]
Length = 213
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYGRTLETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDSAYTEFVEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ A + LV+ + + I + +IY
Sbjct: 123 -------TKKADASQEKAIREQMVQMIEEAAEEHSFEELVDSVVEGRLSSAIYGESKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|429190944|ref|YP_007176622.1| ribosomal protein S3AE [Natronobacterium gregoryi SP2]
gi|448327049|ref|ZP_21516387.1| 30S ribosomal protein S3Ae [Natronobacterium gregoryi SP2]
gi|429135162|gb|AFZ72173.1| ribosomal protein S3AE [Natronobacterium gregoryi SP2]
gi|445609247|gb|ELY63053.1| 30S ribosomal protein S3Ae [Natronobacterium gregoryi SP2]
Length = 213
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E L R E +LGDL K+
Sbjct: 12 EKRWYTVLAPEQFDREELGETPADE-------PEKLYDRTIETTLGDLKGAASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + +EAYV V TTD++ +++ + FT
Sbjct: 65 FKINDVGSDTAYTEFMEHSLTRDYLRSLVRRGASKVEAYVTVLTTDDYRVQVQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRDQMVQMVEEAAADRSFEELIDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|448363263|ref|ZP_21551864.1| 30S ribosomal protein S3Ae [Natrialba asiatica DSM 12278]
gi|445646462|gb|ELY99448.1| 30S ribosomal protein S3Ae [Natrialba asiatica DSM 12278]
Length = 213
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R E +LGDL N K+
Sbjct: 12 EKRWYTVLAPEQFDRTELGETPADE-------PEKVYDRTIETTLGDLNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDTAYTEFQKHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQVQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ AA L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIREQMVQMVEEAAAERTFAELIDGVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|150403608|ref|YP_001330902.1| 30S ribosomal protein S3Ae [Methanococcus maripaludis C7]
gi|166226772|sp|A6VJX5.1|RS3A_METM7 RecName: Full=30S ribosomal protein S3Ae
gi|150034638|gb|ABR66751.1| ribosomal protein S3Ae [Methanococcus maripaludis C7]
Length = 224
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WYDI P F G ++ +T A+ L R+ E+SL DL NE
Sbjct: 17 DTWKSKVWYDIYTPQSF-----GGDVIGQTPANDPAT--LIGRISEISLRDLTNEHSKHM 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + + V G N + F G T + L+S VR+ + I A VDV+T D F LR+ +
Sbjct: 70 TRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVDVRTKDGFKLRVKALV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ +IR KM +I+ A V + +G +I
Sbjct: 130 LT---------AVRARDHHKTEIRVKMEQIIKDMAKETAFAEFVHAMLMGGLGSKIYGDC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEPIPEAPTE 237
++PL ++V+I K+ + GK++E P +E EAP E
Sbjct: 181 KKMFPL-----KRVEIFKSEVLEFGKVVEA--------------PVEEAAVEAPVE 217
>gi|297293868|ref|XP_001117727.2| PREDICTED: 40S ribosomal protein S3a-B-like, partial [Macaca
mulatta]
Length = 54
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 99 TLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIM 152
T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM
Sbjct: 1 TMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIM 54
>gi|444707379|gb|ELW48659.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 132
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+G K+ NQ+++T YAQ S + + LK +V K I + IG++IEK
Sbjct: 10 LGLLKKCNNQIRKTSYAQHSA--GPPNSEDDGNHDPGGADKLKDVVNKLIPDSIGKDIEK 67
Query: 180 ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 225
A SIYPL +VF RKVK+LK P+F+LGKLME+ G+ S +++G K++R
Sbjct: 68 ACQSIYPLHDVFARKVKMLKKPRFELGKLMELRGEGSSSGKATGDEMGTKIER 120
>gi|351696678|gb|EHA99596.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 84
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EIM + + DLK +V K I + IG++IEKA SIYPL +VF RKVK+LK PKF+LGK
Sbjct: 1 MMEIMTREVQTNDLKEMVNKLIPDSIGKDIEKAFQSIYPLHDVFARKVKMLKKPKFELGK 60
Query: 208 LMEVHGDYS 216
ME+H + S
Sbjct: 61 FMELHSEGS 69
>gi|15920665|ref|NP_376334.1| 30S ribosomal protein S3Ae [Sulfolobus tokodaii str. 7]
gi|21263993|sp|Q975F8.1|RS3A_SULTO RecName: Full=30S ribosomal protein S3Ae
gi|15621448|dbj|BAB65443.1| 30S ribosomal protein S3Ae [Sulfolobus tokodaii str. 7]
Length = 193
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K W+ I AP F G+ ++ T A++ L +V E +L DL + Y
Sbjct: 9 DKWKLKKWFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVY 61
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+ R V+G +LT F G + D +RSLVR+ + I+A DV T D + LR+ +
Sbjct: 62 VHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLA 121
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T T A SQ +IR+ + I+ +A+ V+ + + +I +
Sbjct: 122 LT---------TYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQA 172
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ V + K K+LKAP
Sbjct: 173 KKIYPLRKVEVEKTKLLKAP 192
>gi|289582062|ref|YP_003480528.1| 30S ribosomal protein S3Ae [Natrialba magadii ATCC 43099]
gi|448282525|ref|ZP_21473811.1| 30S ribosomal protein S3Ae [Natrialba magadii ATCC 43099]
gi|289531615|gb|ADD05966.1| ribosomal protein S3Ae [Natrialba magadii ATCC 43099]
gi|445576067|gb|ELY30526.1| 30S ribosomal protein S3Ae [Natrialba magadii ATCC 43099]
Length = 213
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R E +LGDL N K+
Sbjct: 12 EKRWYTVLAPEQFDRTELGETPADE-------PEKVYDRTIETTLGDLNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDAAYTEFKEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ A + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRNQMVQMIEEAAEERTFEELIDSVVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V I+K + P+
Sbjct: 176 PLRRVEIQKTTLEARPE 192
>gi|448318805|ref|ZP_21508317.1| 30S ribosomal protein S3Ae [Natronococcus jeotgali DSM 18795]
gi|445597986|gb|ELY52056.1| 30S ribosomal protein S3Ae [Natronococcus jeotgali DSM 18795]
Length = 213
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R E +LG+L + K+
Sbjct: 12 EKRWYTVHAPEQFDRTELGETPADE-------PEKVYDRTIETTLGELTDNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F + T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDAAYTEFQEHALTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQVQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRERMVEMIEEAAAERTFEELIDSIVEGRLSSAIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTSL 187
>gi|70606435|ref|YP_255305.1| 30S ribosomal protein S3Ae [Sulfolobus acidocaldarius DSM 639]
gi|449066647|ref|YP_007433729.1| 30S ribosomal protein S3Ae [Sulfolobus acidocaldarius N8]
gi|449068921|ref|YP_007436002.1| 30S ribosomal protein S3Ae [Sulfolobus acidocaldarius Ron12/I]
gi|76363393|sp|Q4JB17.1|RS3A_SULAC RecName: Full=30S ribosomal protein S3Ae
gi|68567083|gb|AAY80012.1| 30S ribosomal protein S3AE [Sulfolobus acidocaldarius DSM 639]
gi|449035155|gb|AGE70581.1| 30S ribosomal protein S3Ae [Sulfolobus acidocaldarius N8]
gi|449037429|gb|AGE72854.1| 30S ribosomal protein S3Ae [Sulfolobus acidocaldarius Ron12/I]
Length = 197
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE--- 58
D + K WY I AP F G+ L+ T I ++ L ++ EV+L DL +
Sbjct: 11 DKWKLKKWYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVY 63
Query: 59 -HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
H Y KI ++ G + T F+G + D +RSLVR+ + I A VDV T D + LR+
Sbjct: 64 IHLYFKI---LGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRV 120
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
+ T T A SQ IR+ + +I +A D V+ I + +I
Sbjct: 121 KGLVLT---------TYRAHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDI 171
Query: 178 EKATSSIYPLQNVFIRKVKILKAPK 202
+ IYPL+ V I K K+LKAPK
Sbjct: 172 FQEAKKIYPLRKVEIEKTKLLKAPK 196
>gi|145592053|ref|YP_001154055.1| 30S ribosomal protein S3Ae [Pyrobaculum arsenaticum DSM 13514]
gi|166226775|sp|A4WLY6.1|RS3A_PYRAR RecName: Full=30S ribosomal protein S3Ae
gi|145283821|gb|ABP51403.1| SSU ribosomal protein S3AE [Pyrobaculum arsenaticum DSM 13514]
Length = 220
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+A K W+ + AP G + T+ +E L R EVSL D+ + H
Sbjct: 20 DPWALKKWFAVHAPPYL-----GGVFLAEVPATE--AEKLLMRTLEVSLYDITKDISHLP 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + V+G LT F G+ + D ++SLVRK + + A +VKT D +R+ +
Sbjct: 73 VKLKFQIHRVEGLRALTRFKGLELSRDYVKSLVRKGTSKVVAITEVKTKDGMDMRVSVMV 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R AQ S +R+K+ E ++ +A+ D +++ + + ++ A
Sbjct: 133 ITAH------RLGTAQKS---AVRKKITETLLKKASEMDTSQFLKEVLEGTLAADLFIAA 183
Query: 182 SSIYPLQNVFIRKVKILKAP 201
I PL+ V K+K+LK P
Sbjct: 184 KKIAPLRKVEFAKIKVLKYP 203
>gi|397779516|ref|YP_006543989.1| 30S ribosomal protein S3Ae [Methanoculleus bourgensis MS2]
gi|396938018|emb|CCJ35273.1| small subunit ribosomal protein S3Ae [Methanoculleus bourgensis
MS2]
Length = 197
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + P F +G T+ E + R+ +LG+++ + ++ K+R
Sbjct: 17 KRWYRVYVPEAFGKVEIGDTI-------SADPENMVGRIMTATLGEVVQDYSKSHIKMRF 69
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ +V G + T F G T D LRS+V++ + I+ V + D LR+ + T
Sbjct: 70 KINNVAGDSAYTEFVGHEVTRDYLRSMVKRRASRIDTIHPVISKDGKLLRVTVVCLT--- 126
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
A+ SQ+ +R+ + + + A+AA DL++LV+ ++ + R+I K +IYP
Sbjct: 127 ------VSRAEQSQVHAVRQAISQTLTARAAESDLETLVKDIVSGDMARDIFKVVKTIYP 180
Query: 187 LQNVFIRKVKI 197
++ V I K K+
Sbjct: 181 IRRVEITKSKL 191
>gi|448305235|ref|ZP_21495168.1| 30S ribosomal protein S3Ae [Natronorubrum sulfidifaciens JCM 14089]
gi|445589513|gb|ELY43745.1| 30S ribosomal protein S3Ae [Natronorubrum sulfidifaciens JCM 14089]
Length = 213
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PEKVYDRTIETTLGELTNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + +EAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDSAYTEFKEHSLTRDYLRSLVRRGASKVEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR M +++ AA + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRELMVDMIEEAAAERTFEELIDSVVEGRLSSGIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|119719563|ref|YP_920058.1| 30S ribosomal protein S3Ae [Thermofilum pendens Hrk 5]
gi|119524683|gb|ABL78055.1| SSU ribosomal protein S3AE [Thermofilum pendens Hrk 5]
Length = 207
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D ++ K W + AP F N+G L+ + K R EVS D+ + +
Sbjct: 9 DKWSMKKWIKVLAPKAFGFANLG--LIPADEPEKALG-----RTVEVSFYDITKDVSQLH 61
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + V LT M T D +RSLVR+ + ++A +DV+T D +R+ +
Sbjct: 62 IKLKFQIVKVDDGIALTQLKLMEMTRDYIRSLVRRGTSRVDAILDVQTKDGVKMRVMALA 121
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T +TSQ + IRR M +I+ +AAS D + +++ + + E++
Sbjct: 122 VT---------VSRIKTSQKKAIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQA 172
Query: 182 SSIYPLQNVFIRKVKIL 198
IYP++ V + K+K+L
Sbjct: 173 KKIYPIKKVEVYKIKVL 189
>gi|15679588|ref|NP_276705.1| 30S ribosomal protein S3 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6647801|sp|O27630.1|RS3A_METTH RecName: Full=30S ribosomal protein S3Ae
gi|2622716|gb|AAB86066.1| ribosomal protein S3a [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 195
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY IK+P F +G T ++ LK RV E ++ +L + Y
Sbjct: 11 DTWKEKKWYVIKSPKLFGENEIG------TTPSRDPDFLLKRRV-EATMRELTGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + + V G T F G TTD +RS++R+ + ++A V V+T D + L++ +
Sbjct: 64 VKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R A++SQ + +R+ + E + A+ + LVE + I EI
Sbjct: 124 ITIR---------RAKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQA 174
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ V I K ++L+ P
Sbjct: 175 KKIYPLKRVEIIKSRVLEEP 194
>gi|354482217|ref|XP_003503296.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3a-like
[Cricetulus griseus]
Length = 222
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 106/224 (47%), Gaps = 44/224 (19%)
Query: 9 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL-R 67
WY++K P GTKIA +G VFEVSL DL N+E A RK++L R
Sbjct: 29 WYNVKTP-----------------GTKIAXKG---HVFEVSL-DLENDEA-ALRKLKLIR 66
Query: 68 AEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLP 127
V +TNF + K ++K ++IEA+ DVKTT
Sbjct: 67 FPGVS--TSITNFHDVDLIRTKCFPWLKKXQSMIEAHADVKTT----------------A 108
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
++ + + Q Q+ QI+ M EIM + DLK +V + +G E K YPL
Sbjct: 109 TRIIKMPFVQHQQLCQIQMMMMEIMTXEVQEKDLKEMVNDLVISSLG-EAXKRLIMTYPL 167
Query: 188 QNVFIRKVKILKAPKFDLGKLMEVH--GDYSEDVGVKVDRPADE 229
++F+ K K+LK PKF+LGKLME H G S+ P DE
Sbjct: 168 YDIFLGKXKMLKMPKFELGKLMEFHDAGGISQKAASDETGPEDE 211
>gi|379003240|ref|YP_005258912.1| 30S ribosomal protein S3AE [Pyrobaculum oguniense TE7]
gi|375158693|gb|AFA38305.1| Ribosomal protein S3AE [Pyrobaculum oguniense TE7]
Length = 220
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DP+A K W+ + AP G + T+ +E L R EVSL D+ + H
Sbjct: 20 DPWALKKWFAVHAPPYL-----GGVFLAEVPATE--AEKLLMRTLEVSLYDITKDISHLP 72
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + V+G LT F G+ T D ++SLVRK + + A +VKT D +R+ +
Sbjct: 73 VKLKFQIHRVEGLRALTRFKGLELTRDYVKSLVRKGTSKVVAITEVKTKDGMVMRVSVMV 132
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R AQ S IR+K E ++ + + D +++ + + ++ A
Sbjct: 133 ITAH------RLGTAQKS---AIRKKTIETLLKKVSEMDTGKFLKEVLEGTLAADLFIAA 183
Query: 182 SSIYPLQNVFIRKVKILKAP 201
I PL+ V K+K+LK P
Sbjct: 184 KKIAPLRKVEFAKIKVLKYP 203
>gi|304313954|ref|YP_003849101.1| 30S ribosomal protein S3Ae [Methanothermobacter marburgensis str.
Marburg]
gi|302587413|gb|ADL57788.1| 30S ribosomal protein S3Ae [Methanothermobacter marburgensis str.
Marburg]
Length = 195
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY IK+P F ++G T ++ LK RV E ++ +L + Y
Sbjct: 11 DTWKEKKWYVIKSPKMFGENDIG------TTPSRDPDFLLKRRV-EATMRELTGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + +V G T F G TTD +RS++R+ + ++A V V+T D + L++ +
Sbjct: 64 VKLKFQINNVAGSEATTKFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R A++SQ + +R+ + E + A+ + VE + I EI
Sbjct: 124 ITIRR---------AKSSQQKYMRQSIEEHVKEIASEKTFEEFVEGIVTGKIASEIYHQA 174
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYPL+ V I K ++L+ P
Sbjct: 175 KKIYPLKRVEIIKTRVLEEP 194
>gi|269864067|ref|XP_002651443.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220064516|gb|EED42614.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 206
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 44 RVFEVSLGDLLNEEE----HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHT 99
R F V+ GDL + ++ R + + V G N + F GM + +K+ ++RKWHT
Sbjct: 21 RTFSVNQGDLECADPMNAVNSPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHT 80
Query: 100 LIEAYVDVKTTDNFTLRLFCIGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAAS 158
LIEA + + T D T R+F TK+ P+ +K YA+ S+I+ IR+++ E +
Sbjct: 81 LIEANIPITTKDGSTWRVFVNAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDG 138
Query: 159 CDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 199
+++ LV+ E + +E E + IYP+ + I KVK +K
Sbjct: 139 IEVEKLVKVLSTEGLAKEFETRCNEIYPIFAMII-KVKPIK 178
>gi|227827667|ref|YP_002829447.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus M.14.25]
gi|227830364|ref|YP_002832144.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus L.S.2.15]
gi|229579182|ref|YP_002837580.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus Y.G.57.14]
gi|229582066|ref|YP_002840465.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus Y.N.15.51]
gi|229584871|ref|YP_002843373.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus M.16.27]
gi|238619838|ref|YP_002914664.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus M.16.4]
gi|284997870|ref|YP_003419637.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus L.D.8.5]
gi|385773339|ref|YP_005645905.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus HVE10/4]
gi|385775977|ref|YP_005648545.1| 30S ribosomal protein S3Ae [Sulfolobus islandicus REY15A]
gi|259495229|sp|C3N5Q3.1|RS3A_SULIA RecName: Full=30S ribosomal protein S3Ae
gi|259495230|sp|C4KHD2.1|RS3A_SULIK RecName: Full=30S ribosomal protein S3Ae
gi|259495231|sp|C3MQ36.1|RS3A_SULIL RecName: Full=30S ribosomal protein S3Ae
gi|259495232|sp|C3MVF4.1|RS3A_SULIM RecName: Full=30S ribosomal protein S3Ae
gi|259495233|sp|C3NHD3.1|RS3A_SULIN RecName: Full=30S ribosomal protein S3Ae
gi|259495234|sp|C3NEB9.1|RS3A_SULIY RecName: Full=30S ribosomal protein S3Ae
gi|227456812|gb|ACP35499.1| ribosomal protein S3Ae [Sulfolobus islandicus L.S.2.15]
gi|227459463|gb|ACP38149.1| ribosomal protein S3Ae [Sulfolobus islandicus M.14.25]
gi|228009896|gb|ACP45658.1| ribosomal protein S3Ae [Sulfolobus islandicus Y.G.57.14]
gi|228012782|gb|ACP48543.1| ribosomal protein S3Ae [Sulfolobus islandicus Y.N.15.51]
gi|228019921|gb|ACP55328.1| ribosomal protein S3Ae [Sulfolobus islandicus M.16.27]
gi|238380908|gb|ACR41996.1| ribosomal protein S3Ae [Sulfolobus islandicus M.16.4]
gi|284445765|gb|ADB87267.1| ribosomal protein S3Ae [Sulfolobus islandicus L.D.8.5]
gi|323474725|gb|ADX85331.1| ribosomal protein S3Ae [Sulfolobus islandicus REY15A]
gi|323477453|gb|ADX82691.1| ribosomal protein S3Ae [Sulfolobus islandicus HVE10/4]
Length = 208
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEE 58
D + K WY I AP F ++G T VT+T G ++ E +L DL +
Sbjct: 10 DKWKMKKWYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFS 59
Query: 59 HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
Y + + +G ++T F G + D LRSL+R+ + + + DV T D + +R+
Sbjct: 60 QVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKDGYVVRVK 119
Query: 119 CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
+ T +Q ++T IR+ + E + +A+ ++ + + EI
Sbjct: 120 GLVLTTYKCHQSQKTA---------IRKIINETISKKASELTFDDFTQEVVFGRLANEIF 170
Query: 179 KATSSIYPLQNVFIRKVKILKAPKFDLGKLME 210
+AT IYPL+ I K K+LK P+ +LGK +E
Sbjct: 171 EATKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
>gi|397774884|ref|YP_006542430.1| 30S ribosomal protein S3Ae [Natrinema sp. J7-2]
gi|448337706|ref|ZP_21526780.1| 30S ribosomal protein S3Ae [Natrinema pallidum DSM 3751]
gi|448343668|ref|ZP_21532589.1| 30S ribosomal protein S3Ae [Natrinema gari JCM 14663]
gi|448344938|ref|ZP_21533839.1| 30S ribosomal protein S3Ae [Natrinema altunense JCM 12890]
gi|397683977|gb|AFO58354.1| 30S ribosomal protein S3Ae [Natrinema sp. J7-2]
gi|445622584|gb|ELY76035.1| 30S ribosomal protein S3Ae [Natrinema gari JCM 14663]
gi|445624907|gb|ELY78278.1| 30S ribosomal protein S3Ae [Natrinema pallidum DSM 3751]
gi|445636488|gb|ELY89649.1| 30S ribosomal protein S3Ae [Natrinema altunense JCM 12890]
Length = 212
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T + + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDRQELGETPADE-------PDKVYGRTLETTLGELNNNASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F S T D LRSLVR+ + IEAYV V TTD++ +++ + FT
Sbjct: 65 FKITDVGSDSAYTEFVEHSLTRDYLRSLVRRGASKIEAYVTVLTTDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M +++ A + L++ + + I +IY
Sbjct: 123 -------TKKADASQEKAIRERMVQMIEEAAEERSFEELIDSVVEGRLSSGIYGEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|149501930|ref|XP_001518967.1| PREDICTED: 40S ribosomal protein S3a-like, partial
[Ornithorhynchus anatinus]
Length = 62
Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 36 IASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVR 95
IAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM T DK+ S+V+
Sbjct: 1 IASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVK 59
Query: 96 KWH 98
KW
Sbjct: 60 KWQ 62
>gi|19917462|gb|AAM06783.1| ribosomal protein S3Ae [Methanosarcina acetivorans C2A]
Length = 168
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 41 LKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTL 100
L R E ++G+L N+ K+ LR +V G T+ G TTD +RS+V++ +
Sbjct: 8 LVGRNVETTVGELTNDMTKNNTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSR 67
Query: 101 IEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCY----AQTSQIRQIRRKMREIMVAQA 156
I+A VDVKT D + +R VK TC+ A++SQ++ IR M EI+ +A
Sbjct: 68 IDANVDVKTKDGYVIR-------------VKPTCFTIKRARSSQMQAIREMMVEIVKKRA 114
Query: 157 ASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
A D ++ +++ I + I + IYPL+ V IRK ++
Sbjct: 115 AESDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTEV 155
>gi|290972611|ref|XP_002669045.1| predicted protein [Naegleria gruberi]
gi|284082586|gb|EFC36301.1| predicted protein [Naegleria gruberi]
Length = 256
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Query: 39 EGLKHRVFEVSLGDLLN--EEEHAYRKIRLRAEDVQ-GKNVLTNFWGMSFTTDKLRSLVR 95
E + +R EVS D++ +EE Y + L+ ++ ++ T F G T DKL +L +
Sbjct: 85 EKVLNRTLEVSAPDIMPSIKEEMNYNIVNLKINNIPIPQHADTEFNGFRLTKDKLATLTK 144
Query: 96 KWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQ 155
++H+ I + K+ D + +R+F I T+ Q K+T YA SQI++IR M +++ +
Sbjct: 145 RFHSTITLNHEFKSLDGYKIRIFMIASTRMKALQFKKTSYANKSQIKKIRTVMTDVISKK 204
Query: 156 AASCDLKSLVEKFIAEV-IGREIEKATSSIYPL-QNVFIRKVKILKAPKF 203
+ + VE+ + + EI +IYPL + + I K+K+L+ P F
Sbjct: 205 ISQMKILEFVERMAIKCGMSNEIRTRCENIYPLEEEIHITKIKVLEKPVF 254
>gi|409721337|ref|ZP_11269538.1| 30S ribosomal protein S3Ae [Halococcus hamelinensis 100A6]
gi|448721688|ref|ZP_21704231.1| 30S ribosomal protein S3Ae [Halococcus hamelinensis 100A6]
gi|445790760|gb|EMA41410.1| 30S ribosomal protein S3Ae [Halococcus hamelinensis 100A6]
Length = 211
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G T + R E +LGDL ++ K+
Sbjct: 12 QKRWYTVLAPESFDRAELGTTPANEPNA-------VLERTIEATLGDLTDDAGANNVKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
R DV T F T D L SLVR+ + ++AY+ V+T DN+ +R+ + FT
Sbjct: 65 FRINDVGSDTAYTEFEKHELTRDYLNSLVRRGASKVDAYLTVRTNDNYRVRIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR++M E++ A + LV+ + I +IY
Sbjct: 123 -------TQKANDSQEKAIRKRMVELVREAAHDRSFQELVDSVTQGRLSSAIYGEARTIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V + K+ + P
Sbjct: 176 PLRRVEVAKLALDAHP 191
>gi|154151777|ref|YP_001405395.1| 30S ribosomal protein S3Ae [Methanoregula boonei 6A8]
gi|254764503|sp|A7IAJ1.1|RS3A_METB6 RecName: Full=30S ribosomal protein S3Ae
gi|154000329|gb|ABS56752.1| ribosomal protein S3Ae [Methanoregula boonei 6A8]
Length = 201
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 20/193 (10%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K W+ + P N+GK + T +++ E +K R+ + +LG++ N+ + K+
Sbjct: 17 KSWFKVYTPD-----NLGKAYIGDTIASEV--ETVKGRIMQATLGEITNDYAKQHIKMSF 69
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF--CIGFTK 124
+ +V G T F G T D LRSLV++ + I+ +V V T DN +RL C F +
Sbjct: 70 KIAEVTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRLTISCYTFAR 129
Query: 125 RLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSI 184
A +Q +R + +VAQA + DL +LV ++ I +++ K ++
Sbjct: 130 -----------ANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTL 178
Query: 185 YPLQNVFIRKVKI 197
YP + V I K K+
Sbjct: 179 YPTRRVEIIKSKV 191
>gi|444726069|gb|ELW66617.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 106
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EIM + + DLK +V K I + IG+++E SIYPL +VF+RKVK+LK PKF+LG
Sbjct: 1 MMEIMTREVQTNDLKEVVNKLIPDSIGKDMENLCQSIYPLHDVFVRKVKMLKKPKFELGN 60
Query: 208 LMEVHGDYS 216
ME+HG+ S
Sbjct: 61 HMELHGEGS 69
>gi|344240347|gb|EGV96450.1| 40S ribosomal protein S3a [Cricetulus griseus]
Length = 93
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 152 MVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEV 211
M + + DLK +V K I + G++IEKA SIYP +VF RKVK+LK PKF+LGKLME
Sbjct: 1 MTREVQTNDLKEVVNKLIPDSFGKDIEKACQSIYPFHDVFFRKVKMLKKPKFELGKLMEF 60
Query: 212 HGD-------YSEDVGVKVDR 225
HG+ ++ G KV+R
Sbjct: 61 HGEGGSSGKTTGDETGAKVER 81
>gi|126178377|ref|YP_001046342.1| 30S ribosomal protein S3Ae [Methanoculleus marisnigri JR1]
gi|226697651|sp|A3CSL0.1|RS3A_METMJ RecName: Full=30S ribosomal protein S3Ae
gi|125861171|gb|ABN56360.1| SSU ribosomal protein S3AE [Methanoculleus marisnigri JR1]
Length = 197
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + P F +G + E + R+ +LG+++ + ++ K+R
Sbjct: 17 KKWYRVYVPDAFGKAEIGDAI-------SADPENMVGRIMTATLGEVVQDYSKSHIKMRF 69
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ +V G T F G T D LRS+V++ + I+ V + D LR+ + T
Sbjct: 70 KINNVAGDAAYTEFVGHEVTRDYLRSMVKRRASRIDTIHPVVSKDKKLLRVTVVCLTLSR 129
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
+Q SQ+ +R+ + + + A+AA D ++LV+ ++ + R+I KA +IYP
Sbjct: 130 ADQ---------SQVHAVRQAISQALSARAAESDFETLVKDIVSGDMARDIFKAVKTIYP 180
Query: 187 LQNVFIRKVKI 197
++ V I K K+
Sbjct: 181 IRRVEITKSKL 191
>gi|395825688|ref|XP_003786055.1| PREDICTED: 40S ribosomal protein S3a-like [Otolemur garnettii]
Length = 149
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEV 48
DP +KKDWYD+KAP+ F +R++G+TLVTR QGTKIAS+GLK RVF++
Sbjct: 23 DPLSKKDWYDVKAPAMFNIRSIGETLVTRAQGTKIASDGLKGRVFDL 69
>gi|448729401|ref|ZP_21711718.1| 30S ribosomal protein S3Ae [Halococcus saccharolyticus DSM 5350]
gi|445795348|gb|EMA45877.1| 30S ribosomal protein S3Ae [Halococcus saccharolyticus DSM 5350]
Length = 211
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T + + R E +LGDL ++ K+
Sbjct: 12 EKRWYTVFAPEEFDRAELGETPANE-------PDQVLDRTIETTLGDLTDDAGANNVKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
R DV T F T D L SLVR+ + +EAY+ V T+D++ +R+ + FT
Sbjct: 65 FRIRDVGSDAAYTEFIKHELTRDYLDSLVRRGASKVEAYLTVLTSDDYRVRIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ R IRR+M E++ A+ + LV+ + I +IY
Sbjct: 123 -------TKKADDSQERAIRRRMTELVEEAASERTFEELVDSVTQGRLSSAIYGEARTIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V + K+ + P
Sbjct: 176 PLRRVEVGKLALDAHP 191
>gi|448734471|ref|ZP_21716697.1| 30S ribosomal protein S3Ae [Halococcus salifodinae DSM 8989]
gi|445800519|gb|EMA50874.1| 30S ribosomal protein S3Ae [Halococcus salifodinae DSM 8989]
Length = 211
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T + R E +LGDL ++ K+
Sbjct: 12 EKRWYTVFAPEEFDRAELGETPANEPNQ-------VLDRTIETTLGDLTDDAGANNVKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
R DV T F T D L SLVR+ + +EAY+ V T+D + +R+ + FT
Sbjct: 65 FRVRDVGSDAAYTEFIKHELTRDYLDSLVRRGASKVEAYLTVMTSDEYRVRIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ R IRR+M E++ A+ + LV+ + I +IY
Sbjct: 123 -------TQKADDSQERAIRRRMTELVEEAASERTFEELVDSVTQGRLSSAIYGEARTIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V + K+ + P
Sbjct: 176 PLRRVEVGKLALDAHP 191
>gi|124027319|ref|YP_001012639.1| 30S ribosomal protein S3Ae [Hyperthermus butylicus DSM 5456]
gi|123978013|gb|ABM80294.1| 30S ribosomal protein S3Ae [Hyperthermus butylicus DSM 5456]
Length = 215
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASE--GLKHRVFEVSLGDLLNEEEH 59
D + K WY++ AP F G ++ GT A + L RV E +L D+ +
Sbjct: 10 DKWRLKKWYEVIAPPVF-----GNVVL----GTTPADDPRKLIGRVMETTLYDITGDFSL 60
Query: 60 AYRKIRLRAEDVQGKNV--LTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
+ + + DV +N+ T F G D ++SL+R+ + I+ +V+T D + LR+
Sbjct: 61 VHVHLFFQIVDVDEENLKAYTRFKGHELARDYMKSLIRRKSSKIQGIFNVQTKDGYGLRI 120
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
+ T T +TSQ R IR+ M EI+ +AA L L++ + + EI
Sbjct: 121 TGVVLT---------TYRCKTSQKRAIRKIMGEIITKRAAEMTLDELIKAMLFGQLANEI 171
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFD 204
+A IYPL+ V I K K+L P D
Sbjct: 172 FEAAKKIYPLRKVEIYKSKLLTVPGPD 198
>gi|444713119|gb|ELW54027.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 119
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 216
DLK +V K I + I ++IEKA SIYPL +VF+RKVK+LK P+F+LGK ME+HG+ S
Sbjct: 35 DLKEVVNKLIPDSIRKDIEKACQSIYPLHDVFVRKVKMLKRPRFELGKFMELHGEGSNSG 94
Query: 217 ----EDVGVKVDR 225
+++G KV+R
Sbjct: 95 KATGDEMGAKVER 107
>gi|257051807|ref|YP_003129640.1| 30S ribosomal protein S3Ae [Halorhabdus utahensis DSM 12940]
gi|256690570|gb|ACV10907.1| ribosomal protein S3Ae [Halorhabdus utahensis DSM 12940]
Length = 206
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G T E + R E +LGDL N+ K+
Sbjct: 12 EKRWYTVLAPEEFGREELGTTPADE-------PEQVLGRTIETTLGDLRNDAGENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
R D+ T F T D LRSLVR+ + +EAYV V TTD++ +++ + T
Sbjct: 65 FRIRDMGSDTAYTEFIRHELTRDYLRSLVRRGSSKVEAYVTVLTTDDYRVQIQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ A L++ + + I +IY
Sbjct: 123 -------TKKADASQEQAIREQMVEMIEEAAEERTFDDLIDSVVEGRLSSAIYNEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|257388178|ref|YP_003177951.1| 30S ribosomal protein S3Ae [Halomicrobium mukohataei DSM 12286]
gi|257170485|gb|ACV48244.1| ribosomal protein S3Ae [Halomicrobium mukohataei DSM 12286]
Length = 206
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T T +E + R + +LGDL ++ K+
Sbjct: 12 EKRWYTVLAPEQFDREELGET-------TADEAEKVLGRTIQTTLGDLKDDASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ +V + T F T D LRSLVR+ + +EA++ V TTD++ +++ + T
Sbjct: 65 FKINEVASDSAYTEFIKHELTRDYLRSLVRRGSSKVEAFITVLTTDDYRVQIQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR+M +I+ A + LV+ + + + IY
Sbjct: 123 -------TKKADASQEKAIRRQMIDIVEETAEDRSFEQLVDSIVEGRLSSALYSECKDIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V I+K + P
Sbjct: 176 PLRRVEIQKTTMEARP 191
>gi|307354146|ref|YP_003895197.1| 30S ribosomal protein S3Ae [Methanoplanus petrolearius DSM 11571]
gi|307157379|gb|ADN36759.1| ribosomal protein S3Ae [Methanoplanus petrolearius DSM 11571]
Length = 201
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 21/198 (10%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F +G T+ E + RV + +LG+++ + K+R
Sbjct: 18 KSWYKVYAPDYFDKAYLGDTIANE-------PEKVNGRVMQTTLGEMVQDYSKQNIKMRF 70
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
R +V G + ++F G T D LR++V++ + I++ V V T D +R+ FT
Sbjct: 71 RITNVAGDSAYSDFVGHELTKDYLRAMVKRRTSRIDSIVQVTTKDERKIRVTTSCFT--- 127
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
+ R A SQ IR+ + E +VA+AA V++ + I RE+ K ++P
Sbjct: 128 ---INR---ADASQAHAIRKAVTEYVVARAAELTYDQFVKEMVMGDISREVFKIVKKLHP 181
Query: 187 LQNVFIRKVKILKAPKFD 204
IR+V+++K+ D
Sbjct: 182 -----IRRVEVIKSKGTD 194
>gi|110668283|ref|YP_658094.1| 30S ribosomal protein S3Ae [Haloquadratum walsbyi DSM 16790]
gi|385803717|ref|YP_005840117.1| 30S ribosomal protein S3a [Haloquadratum walsbyi C23]
gi|121687271|sp|Q18HQ7.1|RS3A_HALWD RecName: Full=30S ribosomal protein S3Ae
gi|109626030|emb|CAJ52479.1| 30S ribosomal protein S1e [Haloquadratum walsbyi DSM 16790]
gi|339729209|emb|CCC40442.1| 30S ribosomal protein S1e [Haloquadratum walsbyi C23]
Length = 212
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 9 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRA 68
WY I AP F +G T E + R EV+LGD+ ++ K+ +
Sbjct: 15 WYSIIAPEQFDRSELGSTFAD-------DPEKIHGRTLEVTLGDITGDQGENNTKLTFKV 67
Query: 69 EDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPN 128
DV T F D LRSL+R+ + I+A + V+TTD++ ++L + FT
Sbjct: 68 NDVTSDAAYTEFIKHELARDYLRSLIRRGASKIDAAITVRTTDDYRVQLQPVAFT----- 122
Query: 129 QVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQ 188
T A SQ + IRR M +++ A L++ I + I +IYPL+
Sbjct: 123 ----TKKADRSQEQAIRRVMIDLVEDAADERTFADLIDAAIEGQLSSAIYGEAKTIYPLR 178
Query: 189 NVFIRKVKILKAP 201
V ++K+ + P
Sbjct: 179 RVEVKKLTLEARP 191
>gi|385805477|ref|YP_005841875.1| 30S ribosomal protein S3Ae [Fervidicoccus fontis Kam940]
gi|383795340|gb|AFH42423.1| 30S ribosomal protein S3Ae [Fervidicoccus fontis Kam940]
Length = 214
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY++ APS F ++G + E L R E +L D+ + + K+
Sbjct: 18 KKWYEVIAPSVFGEVSIGSI-------PALTPEQLIGRTVEATLYDITGDYTQVHIKLNF 70
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ V+G N T F G D ++ L R+ + ++ +V+T D + LR+ I FT
Sbjct: 71 QIIKVEGHNAHTRFKGHELARDYIKVLTRRKSSKVQGIFNVETKDGYKLRIIAITFT--- 127
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
+ A TSQ R IR+ M +I+ + +++ + + EI IYP
Sbjct: 128 ------SYKANTSQKRAIRKIMEKIITERIKEKSFDEVIQLLVGNDLSTEIFSEAKKIYP 181
Query: 187 LQNVFIRKVKILKAP 201
++ V I K K+L P
Sbjct: 182 IRKVEIYKSKLLFIP 196
>gi|159904608|ref|YP_001548270.1| 30S ribosomal protein S3Ae [Methanococcus maripaludis C6]
gi|226697650|sp|A9A7B4.1|RS3A_METM6 RecName: Full=30S ribosomal protein S3Ae
gi|159886101|gb|ABX01038.1| ribosomal protein S3Ae [Methanococcus maripaludis C6]
Length = 225
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WYDI P F G ++ +T A+ L R+ E+SL DL NE
Sbjct: 17 DTWKSKVWYDIYTPQSF-----GGDVIGQTPANDPAT--LIGRISEISLRDLTNEHSKHM 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + + V G N + F G T + L+S VR+ + I A VDV+T D F LR+ +
Sbjct: 70 TRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVDVRTKDGFKLRVKALV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ +IR KM +I+ A V + +G +I
Sbjct: 130 LT---------AVRARDHHKTEIRVKMEQIIKDMAKETAFAEFVHAMLMGGLGSKIYGDC 180
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
++PL+ V I K ++L+ K
Sbjct: 181 KKMFPLKRVEIFKSEVLEFGK 201
>gi|347523627|ref|YP_004781197.1| 30S ribosomal protein S3Ae [Pyrolobus fumarii 1A]
gi|343460509|gb|AEM38945.1| ribosomal protein S3Ae [Pyrolobus fumarii 1A]
Length = 213
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLK--HRVFEVSLGDLLNEEEH 59
D + K WY++ AP F G ++ GT A + LK RV EV+L D+ +
Sbjct: 9 DKWRLKKWYEVIAPPVF-----GSVVL----GTTPADDPLKLIGRVMEVTLFDITGDFSQ 59
Query: 60 AYRKIRLRAEDVQGKNV--LTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL 117
+ + + DV +N+ T F G D ++SL+R+ + I+ +V T D + LR+
Sbjct: 60 VHIHLYFQIVDVDEQNLKAYTRFKGHELARDYMKSLIRRKSSKIQGIYNVWTKDGYGLRI 119
Query: 118 FCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREI 177
+ T + +TSQ + IR+ M EI+ +A+ L L++ + + EI
Sbjct: 120 TGVVLT---------SYRCKTSQKKAIRKIMGEIITKRASEMTLDELIQAMLFGKLANEI 170
Query: 178 EKATSSIYPLQNVFIRKVKILKAPKFD 204
A IYP++ V I K K+L P D
Sbjct: 171 HAAAKKIYPVRKVEIYKSKLLWVPGPD 197
>gi|119580265|gb|EAW59861.1| hCG41639, isoform CRA_a [Homo sapiens]
Length = 140
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 140 QIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 199
++ QI++KM EIM + + DLK +V K I + G++IEKA S+YPL VFIRKVKI K
Sbjct: 72 EVCQIQKKMMEIMTQEVQTNDLKEVVNKLIPDSTGKDIEKACLSVYPLHGVFIRKVKI-K 130
Query: 200 APKFDLGKLM 209
PKF+LGKLM
Sbjct: 131 KPKFELGKLM 140
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEV 48
++KDWYD+KAP+ F + +GKTL+ RTQG KIAS+GLK VFEV
Sbjct: 29 LSRKDWYDVKAPAMFSIITMGKTLIARTQGIKIASDGLKGHVFEV 73
>gi|444723831|gb|ELW64461.1| TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [Tupaia
chinensis]
Length = 703
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EIM + + DLK +V K I + IG++ EKA S YPL +V +RKVK+LK KF+LGK
Sbjct: 1 MMEIMTQEVQTNDLKEVVNKLIPDSIGKDTEKAGQSKYPLHDVLVRKVKMLKELKFELGK 60
Query: 208 LMEVHGD 214
LME+HG+
Sbjct: 61 LMELHGE 67
>gi|6474784|dbj|BAA87298.1| 40s ribosomal protein RP10 [Schizosaccharomyces pombe]
Length = 72
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGD 52
DPF++KDWYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL D
Sbjct: 22 DPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLAD 72
>gi|150400261|ref|YP_001324028.1| 30S ribosomal protein S3Ae [Methanococcus vannielii SB]
gi|166226774|sp|A6USE4.1|RS3A_METVS RecName: Full=30S ribosomal protein S3Ae
gi|150012964|gb|ABR55416.1| ribosomal protein S3Ae [Methanococcus vannielii SB]
Length = 220
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I P F +G+T L R+ E+SL DL NE
Sbjct: 17 DTWKSKVWYNIYTPQSFGGDVIGQTPAN-------DPSALMGRISEISLRDLTNEHSKHM 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + + V G N +T F G T + L+S +R+ + I +DV+T D F +R+ +
Sbjct: 70 TRMYFKVDGVSGNNAITQFVGHDTTREYLKSQIRRRRSKINVIIDVRTKDGFKVRVKALV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T V+ Y +T +IR KM +I+ A V + +G +I
Sbjct: 130 LT-----AVRARDYHKT----EIRVKMEQIIKEMANETAFAEFVHAMVMGGVGSKIYSEC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGK-LMEVHGDYSEDV 219
++PL ++V+I K+ + GK ++EV + E V
Sbjct: 181 KKMFPL-----KRVEIFKSEVLEFGKAVLEVTPEAQEAV 214
>gi|351698397|gb|EHB01316.1| 40S ribosomal protein S3a [Heterocephalus glaber]
Length = 170
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 7/78 (8%)
Query: 155 QAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
+ + DLK V K I + IG++IEKA SI PL +VF+RKVK+L PKF+LGKLME+HG+
Sbjct: 81 EVQTNDLKEKVNKLIPDSIGKDIEKACQSIDPLHDVFLRKVKMLNKPKFELGKLMELHGE 140
Query: 215 YS-------EDVGVKVDR 225
S ++ G KV+R
Sbjct: 141 GSSSGKATGDETGAKVER 158
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 38/41 (92%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLK 42
DPF++KDWYD+KA + F +RN+GKTLVTRTQGTKIAS+GLK
Sbjct: 23 DPFSRKDWYDVKALAMFNIRNIGKTLVTRTQGTKIASDGLK 63
>gi|335438752|ref|ZP_08561488.1| 30S ribosomal protein S3Ae [Halorhabdus tiamatea SARL4B]
gi|334890874|gb|EGM29134.1| 30S ribosomal protein S3Ae [Halorhabdus tiamatea SARL4B]
Length = 206
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G T E + R E +LGDL N+ K+
Sbjct: 12 EKRWYTVLAPEEFGREELGTTPADE-------PEQVLGRTIETTLGDLRNDAGENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ D+ T F T D LRSLVR+ + +EAYV V TTD++ +++ + T
Sbjct: 65 FKIRDIGSDTAYTEFIRHELTRDYLRSLVRRGSSKVEAYVTVLTTDDYRVQIQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR +M E++ A L++ + + I +IY
Sbjct: 123 -------TKKADASQEQAIREQMVEMIEEAAEERTFDDLIDSVVEGRLSSAIYNEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKTTL 187
>gi|448634095|ref|ZP_21674550.1| 30S ribosomal protein S3Ae [Haloarcula vallismortis ATCC 29715]
gi|445750024|gb|EMA01465.1| 30S ribosomal protein S3Ae [Haloarcula vallismortis ATCC 29715]
Length = 213
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY ++AP F +GKT + + R E +LG+L N+ K+
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPADE-------PDKVLGRTIETTLGELTNDASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ +V + T F T D LRSLVR+ + +EAY+ V TTD++ +++ + T
Sbjct: 65 FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQVQPVAVT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M +++ A + LV+ + + I IY
Sbjct: 123 -------TKKADASQEKAIRRTMIDLVRETAKDRTFEELVDSVVEGRLSSAIYGGAKDIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIKKTTL 187
>gi|290980121|ref|XP_002672781.1| predicted protein [Naegleria gruberi]
gi|284086360|gb|EFC40037.1| predicted protein [Naegleria gruberi]
Length = 255
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 43 HRVFEVSLGDLLN-EEEHAYRKIRLRAEDVQGKNVL-TNFWGMSFTTDKLRSLV-RKWHT 99
+R E+S D++ +EE+ Y ++L + + T F G T DKL SL RKWH+
Sbjct: 90 NRSMELSAPDIMPLKEEYNYNIVKLNISTIDDQQCAQTEFNGFRLTRDKLTSLTCRKWHS 149
Query: 100 LIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASC 159
+I K+ D + +R+F T+ Q+K+T YA SQI++IR M ++++ +
Sbjct: 150 IITFNNTFKSMDGYHVRIFMTSCTRMKLLQIKKTSYANKSQIKKIRTIMYQVILKYLSKM 209
Query: 160 DLKSLVEKFIAEV-IGREIEKATSSIYPLQN-VFIRKVKILKAPKF 203
+ V + + + EI +IYPL++ + I K+K+L+ P+
Sbjct: 210 TILEFVNRMAIKCEMSSEIRMKCENIYPLEDEILITKIKLLEKPQL 255
>gi|444707704|gb|ELW48925.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 156
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 128 NQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPL 187
Q+++T YAQ Q+RQI++KM EIM + + DLK +V K I + IG++IEKA SIYPL
Sbjct: 2 QQIQKTSYAQYQQVRQIQKKMMEIMTQKMQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 61
Query: 188 QNVFIRK 194
+VF++K
Sbjct: 62 HDVFVKK 68
>gi|444705989|gb|ELW47363.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 161
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 39/45 (86%)
Query: 3 PFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFE 47
PF+KKDW+D+KAP+ F +RN+GKTLVTRTQ TKIAS+ LK VFE
Sbjct: 24 PFSKKDWFDVKAPAMFNIRNIGKTLVTRTQATKIASDNLKGHVFE 68
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 104 YVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKS 163
+ DVK F +R K L + + T A + + K E + + DLK
Sbjct: 30 WFDVKAPAMFNIR----NIGKTLVTRTQATKIASDNLKGHVFEKDDENQDPEVQTNDLKD 85
Query: 164 LVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 213
+V K I + G++IEKA SIY L VF+RKVK+LK PKF+LGKLME+HG
Sbjct: 86 VVNKLIPDSTGKDIEKACQSIYRLY-VFVRKVKMLKKPKFELGKLMELHG 134
>gi|15897646|ref|NP_342251.1| 30S ribosomal protein S3Ae [Sulfolobus solfataricus P2]
gi|284174972|ref|ZP_06388941.1| 30S ribosomal protein S3Ae [Sulfolobus solfataricus 98/2]
gi|384434261|ref|YP_005643619.1| 30S ribosomal protein S3Ae [Sulfolobus solfataricus 98/2]
gi|11134780|sp|Q9UXD4.1|RS3A_SULSO RecName: Full=30S ribosomal protein S3Ae
gi|6015730|emb|CAB57557.1| 30S ribosomal protein S3AE [Sulfolobus solfataricus P2]
gi|13813913|gb|AAK41041.1| SSU ribosomal protein S3AE (rps3AE) [Sulfolobus solfataricus P2]
gi|261602415|gb|ACX92018.1| ribosomal protein S3Ae [Sulfolobus solfataricus 98/2]
Length = 208
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEE 58
D + K WY + P F ++G T +T+T G ++ E +L DL +
Sbjct: 10 DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59
Query: 59 HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
Y + + +G ++T F G + D LRSL+R+ + I + DV T D + +R+
Sbjct: 60 QVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVK 119
Query: 119 CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
+ T +Q ++T IR+ + E + +A+ ++ + + EI
Sbjct: 120 GLVLTTYKCHQSQKTA---------IRKIINETVSKKASELSFDDFTQEVVFGRLANEIF 170
Query: 179 KATSSIYPLQNVFIRKVKILKAPKFDLGKLME 210
+A IYPL+ I K K+LK P+ +LGK +E
Sbjct: 171 EAAKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
>gi|55378212|ref|YP_136062.1| 30S ribosomal protein S3 [Haloarcula marismortui ATCC 43049]
gi|448636839|ref|ZP_21675287.1| 30S ribosomal protein S3Ae [Haloarcula sinaiiensis ATCC 33800]
gi|448661600|ref|ZP_21683755.1| 30S ribosomal protein S3Ae [Haloarcula californiae ATCC 33799]
gi|59798603|sp|Q5V296.1|RS3A_HALMA RecName: Full=30S ribosomal protein S3Ae
gi|55230937|gb|AAV46356.1| 30S ribosomal protein S3Ae [Haloarcula marismortui ATCC 43049]
gi|445758430|gb|EMA09744.1| 30S ribosomal protein S3Ae [Haloarcula californiae ATCC 33799]
gi|445765145|gb|EMA16284.1| 30S ribosomal protein S3Ae [Haloarcula sinaiiensis ATCC 33800]
Length = 213
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY ++AP F +GKT + + R E +LG+L N+ K+
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPAEE-------PDKVLGRTIETTLGELTNDASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ +V + T F T D LRSLVR+ + +EAY+ V TTD++ +++ + T
Sbjct: 65 FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M +++ A + L++ + + I IY
Sbjct: 123 -------TKKADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIKKTTL 187
>gi|269867293|ref|XP_002652547.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220062252|gb|EED41509.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 171
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 8 RYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFVNA 67
Query: 122 FTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
TK+ P+ +K YA+ S+I+ IR+++ E + +++ LV+ E + +E E
Sbjct: 68 VTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTEGLAKEFETR 125
Query: 181 TSSIYPLQNVFIRKVKILK 199
+ IYP+ + I KVK +K
Sbjct: 126 CNEIYPIFAMII-KVKPIK 143
>gi|119616352|gb|EAW95946.1| hCG1643030, isoform CRA_a [Homo sapiens]
Length = 84
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 148 MREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGK 207
M EI+ + + D K + K I + IG++IE A SIYPL +VFIRKVK+LK PKF+LGK
Sbjct: 1 MMEIINTEVQTNDFKKVFNKLIPDNIGKDIENACQSIYPLHDVFIRKVKMLKKPKFELGK 60
Query: 208 LMEVHGDYS 216
L+E H + S
Sbjct: 61 LIEFHDEVS 69
>gi|448681604|ref|ZP_21691695.1| 30S ribosomal protein S3Ae [Haloarcula argentinensis DSM 12282]
gi|448685399|ref|ZP_21693391.1| 30S ribosomal protein S3Ae [Haloarcula japonica DSM 6131]
gi|445767474|gb|EMA18577.1| 30S ribosomal protein S3Ae [Haloarcula argentinensis DSM 12282]
gi|445782010|gb|EMA32861.1| 30S ribosomal protein S3Ae [Haloarcula japonica DSM 6131]
Length = 213
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY ++AP F +GKT + + R E +LG+L N+ K+
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPADE-------PDKVLGRTIETTLGELTNDASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ +V T F T D LRSLVR+ + +EAY+ V TTD++ +++ + T
Sbjct: 65 FKINEVASDTAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M +++ A + LV+ + + I IY
Sbjct: 123 -------TKKADASQEKAIRRTMIDLVRETAKDRTFEELVDSVVEGRLSSAIYGEAKDIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIKKTTL 187
>gi|297619437|ref|YP_003707542.1| 30S ribosomal protein S3Ae [Methanococcus voltae A3]
gi|297378414|gb|ADI36569.1| ribosomal protein S3Ae [Methanococcus voltae A3]
Length = 218
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I AP F +G+T GL RV E+SL DL N+
Sbjct: 17 DTWKTKVWYNIVAPKSFGGAEIGQTPAN-------DPAGLIGRVSEISLKDLTNDHSKHS 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+++ + V GKN +T F G T + L+S VR+ + I +DV+T D F LR+ +
Sbjct: 70 IRMQFKVNSVSGKNAVTQFVGHDTTREYLKSQVRRRRSKITTIIDVRTKDGFKLRVKALV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ +IR K +I+ + V + +G +I
Sbjct: 130 LT---------AVRARDHHKTEIRLKTEQIIRDMSKELTFPEFVHAMLMGAMGSKIYGEC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLG 206
++PL R+V++ K+ ++G
Sbjct: 181 KKLFPL-----RRVEVYKSDVMEIG 200
>gi|76802245|ref|YP_327253.1| 30S ribosomal protein S3Ae [Natronomonas pharaonis DSM 2160]
gi|121708128|sp|Q3IQA0.1|RS3A_NATPD RecName: Full=30S ribosomal protein S3Ae
gi|76558110|emb|CAI49696.1| 30S ribosomal protein S1e [Natronomonas pharaonis DSM 2160]
Length = 206
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R + +LG+L N+ K+
Sbjct: 12 EKRWYTVMAPEIFDRAELGETPADE-------PEQVYDRTVQTTLGELQNDPSENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T+F T D LRSL R+ + ++A+V V TTD++ +++ + +T
Sbjct: 65 FQISDVGSDTAYTDFVQHELTRDYLRSLTRRGTSKVDAFVTVLTTDDYRVQVQPVAYT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IR M +++ AA L++ + + I +IY
Sbjct: 123 -------TKSADRSQEQAIRSTMVDLVEESAADNTFADLIDSIVEGRLSSAIYNEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K ++
Sbjct: 176 PLRRVEIQKTRL 187
>gi|150401186|ref|YP_001324952.1| 30S ribosomal protein S3Ae [Methanococcus aeolicus Nankai-3]
gi|150013889|gb|ABR56340.1| ribosomal protein S3Ae [Methanococcus aeolicus Nankai-3]
Length = 229
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASE--GLKHRVFEVSLGDLLNEEEH 59
D + K WY+I+ P F G L+ GT A++ L RV E SL DL N+
Sbjct: 17 DTWKTKSWYEIRTPQSF-----GGDLL----GTTPANDPSNLLGRVTETSLKDLTNDHSK 67
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
++ + + V G N T F G + T + L+SLVR+ + I D++T D + +R+
Sbjct: 68 HMVRLYFKVDGVAGNNATTQFVGHNTTREYLKSLVRRRRSKIVTITDIRTKDGYKIRVKA 127
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
+ T A+ IR+KM +I+V A + V+ + +G +I
Sbjct: 128 MVLT---------AVRARDHHKTDIRKKMEQIIVNMARNSTFPEFVQAMLLGGLGSKIYA 178
Query: 180 ATSSIYPLQNVFIRKVKILK 199
I P++ V I K ++++
Sbjct: 179 TCKRIMPMKRVEIYKSEVME 198
>gi|448671720|ref|ZP_21687525.1| 30S ribosomal protein S3Ae [Haloarcula amylolytica JCM 13557]
gi|445764856|gb|EMA15999.1| 30S ribosomal protein S3Ae [Haloarcula amylolytica JCM 13557]
Length = 213
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY ++AP F +GKT + + R E +LG+L N+ K+
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPADE-------PDKVLGRTIETTLGELTNDASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ +V + T F T D LRSLVR+ + +EAY+ V TTD++ +++ + T
Sbjct: 65 FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M +++ A + L++ + + I IY
Sbjct: 123 -------TKKADASQEKAIRRTMIDLVRETAEDRTFEQLIDSVVEGRLSSAIYGEAKDIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIKKTTL 187
>gi|322370301|ref|ZP_08044860.1| ribosomal protein S3Ae [Haladaptatus paucihalophilus DX253]
gi|320550009|gb|EFW91664.1| ribosomal protein S3Ae [Haladaptatus paucihalophilus DX253]
Length = 211
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G T E + R E +LG+L N K+
Sbjct: 12 EKRWYTVLAPEQFDREELGTTPADE-------PEKVLGRTIETTLGELTNNASENNTKLV 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F T D LRSLVR+ + +EAYV V T+D++ +++ + FT
Sbjct: 65 FKINDVGSDAAYTEFVRHELTRDYLRSLVRRGASKVEAYVTVLTSDDYRVQIQPVAFT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ IRR M +I+ A + L++ + + I +IY
Sbjct: 123 -------TKKADHSQEMAIRRTMIDIVQDAAKDHTFQDLIDSVVEGRLSSAIYGDAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIQKATL 187
>gi|390469167|ref|XP_002753979.2| PREDICTED: uncharacterized protein LOC100412750 [Callithrix
jacchus]
Length = 541
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFE 47
DPF K+D YD+KAP+ F +RN+GK LVTRTQGTKIAS+GLK RVFE
Sbjct: 445 DPFPKEDSYDMKAPAMFNIRNIGKMLVTRTQGTKIASDGLKGRVFE 490
>gi|148642721|ref|YP_001273234.1| 30S ribosomal protein S3Ae [Methanobrevibacter smithii ATCC 35061]
gi|222445783|ref|ZP_03608298.1| hypothetical protein METSMIALI_01426 [Methanobrevibacter smithii
DSM 2375]
gi|261349673|ref|ZP_05975090.1| 30S ribosomal protein S3Ae [Methanobrevibacter smithii DSM 2374]
gi|166226773|sp|A5UKY8.1|RS3A_METS3 RecName: Full=30S ribosomal protein S3Ae
gi|148551738|gb|ABQ86866.1| small subunit ribosomal protein S3Ae [Methanobrevibacter smithii
ATCC 35061]
gi|222435348|gb|EEE42513.1| 30S ribosomal protein S3Ae [Methanobrevibacter smithii DSM 2375]
gi|288861631|gb|EFC93929.1| 30S ribosomal protein S3Ae [Methanobrevibacter smithii DSM 2374]
Length = 193
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY IK P F + +G+T + L R EV++ +L + Y
Sbjct: 12 DTWKEKSWYTIKTPVNFEDKEIGETPAR-------DPDYLIGRGVEVTMRELSGDFSKQY 64
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+R ++V G T F G TTD +RS++R+ + I+A VKT D+ ++L +
Sbjct: 65 IKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLA 124
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R A++SQ + +R+ + +++ AA L++ + + E+
Sbjct: 125 VTTR---------RAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNA 175
Query: 182 SSIYPLQNVFIRKVKIL 198
IYPL+ V I K K+L
Sbjct: 176 KKIYPLKRVEIIKSKVL 192
>gi|344212276|ref|YP_004796596.1| 30S ribosomal protein S3Ae [Haloarcula hispanica ATCC 33960]
gi|343783631|gb|AEM57608.1| 30S ribosomal protein S3Ae [Haloarcula hispanica ATCC 33960]
Length = 213
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY ++AP F +GKT + + R E +LG+L N+ K+
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPADE-------PDKVLGRTIETTLGELTNDASENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ +V T F T D LRSLVR+ + +EAY+ V TTD++ +++ + T
Sbjct: 65 FKINEVASDTAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M +++ A + L++ + + I IY
Sbjct: 123 -------TKKADASQEKAIRRTMIDLVRETAKDRTFEQLIDSVVEGRLSSAIYGEAKDIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V I+K +
Sbjct: 176 PLRRVEIKKTTL 187
>gi|288559718|ref|YP_003423204.1| ribosomal protein S3Ae Rps3ae [Methanobrevibacter ruminantium M1]
gi|288542428|gb|ADC46312.1| ribosomal protein S3Ae Rps3ae [Methanobrevibacter ruminantium M1]
Length = 192
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY IK P F + +G T E + R EV++ +L + Y
Sbjct: 11 DTWKEKSWYTIKTPIAFGEKEIGTTPAR-------DPELVYGRTVEVTMRELTGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ ++V G T F G TTD +RS++R+ + I+A V V T D L+L +
Sbjct: 64 IKLQFEVDNVAGDIASTKFTGHKTTTDYVRSMIRRGTSRIDAPVIVTTQDERKLKLHVLA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R A++SQ + +R + E++ A+ LVE + + E+
Sbjct: 124 VTTR---------RAKSSQQKYMRETITELVSNVASEKTFDELVEISVNGRLASEVYHKA 174
Query: 182 SSIYPLQNVFIRKVKIL 198
IYPL+ V I K K+L
Sbjct: 175 KKIYPLKRVEIIKSKVL 191
>gi|448738367|ref|ZP_21720394.1| 30S ribosomal protein S3Ae [Halococcus thailandensis JCM 13552]
gi|445801824|gb|EMA52141.1| 30S ribosomal protein S3Ae [Halococcus thailandensis JCM 13552]
Length = 211
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F +G+T + R E +LG+L ++ K+
Sbjct: 13 KRWYTVFAPESFDRAELGETPADEPNA-------VLDRTIETTLGELTDDAGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
R DV T F T D L SLVR+ + +EAY+ V+T+D++ +R+ + FT
Sbjct: 66 RITDVGSDAAYTEFEKHELTRDYLGSLVRRGASKVEAYLTVRTSDDYRVRIQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ + IR++M E++ A+ + L + + I +IYP
Sbjct: 123 ------TKKADDSQEKAIRKEMTELVEEAASERTFEELTDSVTQGRLSSAIYGEARTIYP 176
Query: 187 LQNVFIRKVKILKAP 201
L+ V I K+ + P
Sbjct: 177 LRRVEIGKLALDAHP 191
>gi|297527583|ref|YP_003669607.1| 30S ribosomal protein S3Ae [Staphylothermus hellenicus DSM 12710]
gi|297256499|gb|ADI32708.1| ribosomal protein S3Ae [Staphylothermus hellenicus DSM 12710]
Length = 213
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLK--HRVFEVSLGDLLNEEEH 59
D + K WY++ AP F G ++ GT A + LK RV E +L D+ +
Sbjct: 12 DKWKLKKWYEVIAPPIF-----GNIVI----GTTPADDPLKLIGRVMETTLYDITGDITQ 62
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ ++ + DV+ +T F G + D ++SL+R+ + I+ +V T D + LRL
Sbjct: 63 VHVRLYFQIIDVKDNKAITRFKGHELSRDYIKSLIRRKSSKIQGIFNVVTKDGYHLRLTI 122
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I T + +TSQ R IR+ M E + + L L+ + + + I +
Sbjct: 123 IALT---------SYRCKTSQKRAIRKIMEEYVKERVPQLTLDELIHEMVFGKMSAVIAE 173
Query: 180 ATSSIYPLQNVFIRKVKILKAP 201
IYP++ V + K K+L P
Sbjct: 174 RARKIYPIRKVEVYKSKLLMIP 195
>gi|432328314|ref|YP_007246458.1| ribosomal protein S3AE [Aciduliprofundum sp. MAR08-339]
gi|432135023|gb|AGB04292.1| ribosomal protein S3AE [Aciduliprofundum sp. MAR08-339]
Length = 233
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F + +G T E + R+ E +L DL + + +
Sbjct: 16 DKWRSKVWYTIIAPETFSSKEIGMTPAN-------DPEKVIGRIAESTLYDLTGDFKKMH 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + +QG N T F G T D +R +VR+ + I+A V T D + +R+ I
Sbjct: 69 VKLYFKINRIQGTNAYTRFIGHDMTNDYIRRMVRRRRSRIDAIFPVLTADGYKIRVKVIA 128
Query: 122 FT-KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
+R+ + +K ++R+K+ E + A+A V+ +++ + R++ KA
Sbjct: 129 VPDRRIKSSIK----------SELRKKISEYLFAKATELTFSEYVKYLLSDEVKRDLSKA 178
Query: 181 TSSIYPLQNVFIRKVKILKAPK 202
IYP++ + +RK ++L P+
Sbjct: 179 LKPIYPVRRIEVRKTEVLHFPE 200
>gi|126465744|ref|YP_001040853.1| 30S ribosomal protein S3Ae [Staphylothermus marinus F1]
gi|166226778|sp|A3DMT5.1|RS3A_STAMF RecName: Full=30S ribosomal protein S3Ae
gi|126014567|gb|ABN69945.1| SSU ribosomal protein S3AE [Staphylothermus marinus F1]
Length = 212
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLK--HRVFEVSLGDLLNEEEH 59
D + K WY++ AP F G ++ GT A + LK RV E +L D+ +
Sbjct: 11 DKWKLKKWYEVIAPPVF-----GNIVI----GTTPADDPLKLIGRVMETTLYDITGDITQ 61
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ ++ + DV+ +T F G + D ++SL+R+ + I+ +V T D + LRL
Sbjct: 62 VHVRLYFQIIDVKENKAITRFKGHELSRDYIKSLIRRKSSKIQGIFNVVTKDGYHLRLTI 121
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I T + +TSQ R IR+ M E + + L L+ + + + I +
Sbjct: 122 IALT---------SYRCKTSQKRAIRKIMEEYVKERVPQLTLDELIHEMVFGKMSAVIAE 172
Query: 180 ATSSIYPLQNVFIRKVKILKAP 201
IYP++ V + K K+L P
Sbjct: 173 RARKIYPIRKVEVYKSKLLMIP 194
>gi|134045940|ref|YP_001097426.1| 30S ribosomal protein S3Ae [Methanococcus maripaludis C5]
gi|166226771|sp|A4FYC7.1|RS3A_METM5 RecName: Full=30S ribosomal protein S3Ae
gi|132663565|gb|ABO35211.1| SSU ribosomal protein S3AE [Methanococcus maripaludis C5]
Length = 225
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WYDI P F G ++ +T A+ L R+ E+SL DL NE
Sbjct: 17 DTWKSKVWYDIYTPQSF-----GGDVIGQTPANDPAT--LIGRISEISLRDLTNEHSKHM 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + + V G N + F G T + L+S VR+ + I A VDV+T D F +R+ +
Sbjct: 70 TRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVDVRTKDGFKVRVKALV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ +IR M +I+ A V + +G +I
Sbjct: 130 LT---------AVRARDHHKTEIRINMEQIIRHMAKETAFAEFVHAMLMGGLGSKIYGDC 180
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
++PL+ V I K ++L+ K
Sbjct: 181 KKMFPLKRVEIFKSEVLEFGK 201
>gi|448725890|ref|ZP_21708321.1| 30S ribosomal protein S3Ae [Halococcus morrhuae DSM 1307]
gi|445797222|gb|EMA47699.1| 30S ribosomal protein S3Ae [Halococcus morrhuae DSM 1307]
Length = 211
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F +G+T + R E +LG+L ++ K+
Sbjct: 13 KRWYTVFAPESFDRAELGETPADEPNA-------VLDRTIETTLGELTDDAGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
R D+ T F T D L SLVR+ + +EAY+ V+T+D++ +R+ + FT
Sbjct: 66 RITDIGSDAAYTEFEKHELTRDYLGSLVRRGASKVEAYLTVRTSDDYRVRIQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ + IR++M E++ A+ + L + + I +IYP
Sbjct: 123 ------TKKADDSQEKAIRKEMTELVEEAASERTFEELTDSVTQGRLSSAIYGEARTIYP 176
Query: 187 LQNVFIRKVKILKAP 201
L+ V I K+ + P
Sbjct: 177 LRRVEIGKLALDAHP 191
>gi|119713740|gb|ABL97789.1| ribosomal protein S3AE [uncultured marine bacterium HF10_29C11]
Length = 322
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 2 DPFAKKDWYDIKAP-SCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D + K WY I+AP + +N+G+T+ + E + R++E++ + +
Sbjct: 21 DKWKTKRWYTIRAPRHPWNYQNIGETIGE-------SDEHIIGRIYEMTQQEFNGDFTKM 73
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ +R R + G++ LT F G T+ +R +R++ I+ +DV T D + +R+ +
Sbjct: 74 HVMLRFRVSETVGQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPL 133
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
T++ QTS + IR K R++++ A +L + + EI+
Sbjct: 134 IITQK---------RVQTSVKQSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLETEIQNQ 184
Query: 181 TSSIYPLQNVFIRKVKILK-APKFDLG-KLMEVHGD 214
+IYP ++V IRK ++L+ K + G L E+H +
Sbjct: 185 IKTIYPCRSVVIRKSQLLQEGVKMEEGPTLDEIHAE 220
>gi|444706106|gb|ELW47466.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 125
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 152 MVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEV 211
M + + LK LV K + IG++ EKA SIYPL +VFI VK+L+ PKF+LGKLME+
Sbjct: 1 MTCEVQTNGLKDLVNKLTPDGIGKDTEKACQSIYPLHDVFISTVKMLQKPKFELGKLMEL 60
Query: 212 HGDYSEDVGVKVDRPADEP 230
HG+ + P+ +P
Sbjct: 61 HGEEMASACLDTAVPSAQP 79
>gi|297293509|ref|XP_001082660.2| PREDICTED: 40S ribosomal protein S3a-like [Macaca mulatta]
Length = 113
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 7/64 (10%)
Query: 169 IAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGV 221
I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G
Sbjct: 38 IPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGA 97
Query: 222 KVDR 225
KV+R
Sbjct: 98 KVER 101
>gi|452206951|ref|YP_007487073.1| 30S ribosomal protein S1e [Natronomonas moolapensis 8.8.11]
gi|452083051|emb|CCQ36334.1| 30S ribosomal protein S1e [Natronomonas moolapensis 8.8.11]
Length = 208
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F +G+T E + R + +LG+L N+ K+
Sbjct: 12 EKRWYTVMAPEMFDRAELGETPADE-------PEQVYDRTIQTTLGELQNDPSENNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + F T D LRSL R+ + ++A++ V TTD++ +++ + +T
Sbjct: 65 FQITDVGSDTAYSEFIQHELTRDYLRSLTRRGTSKVDAFITVLTTDDYRVQVQPVAYT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ IRR M +++ AA + L++ + + I +IY
Sbjct: 123 -------TKSADHSQEHAIRRTMIDLVEEAAADRTFEGLIDSIVEGRLSSAIYAEAKTIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V ++K ++
Sbjct: 176 PLRRVEVQKTRV 187
>gi|432329897|ref|YP_007248040.1| ribosomal protein S3AE [Methanoregula formicicum SMSP]
gi|432136606|gb|AGB01533.1| ribosomal protein S3AE [Methanoregula formicicum SMSP]
Length = 201
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEG--LKHRVFEVSLGDLLNEEEHAYRKI 64
K W+ + P N+GK + G IA++ + R+ +LG++ N+ + K+
Sbjct: 17 KSWFKVHTPD-----NLGKAYI----GDTIANDADSVVGRIMHATLGEITNDYAKQHMKM 67
Query: 65 RLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTK 124
+ V G + T F G T D LRSLV++ + I+ V + T + +RL +T
Sbjct: 68 SFKINTVTGDSAYTEFVGHEVTRDYLRSLVKRRSSRIDTIVPITTKEGKKVRLTVCTYT- 126
Query: 125 RLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSI 184
A SQ IR ++ + + AQA + DL +L+ ++ I R++ KA +I
Sbjct: 127 --------FARANLSQEHAIRGEIMKGIAAQAGAWDLTTLLNGIVSGEISRDLFKAVKTI 178
Query: 185 YPLQNVFIRKVKI 197
YP + V + K K+
Sbjct: 179 YPTRRVEVIKSKV 191
>gi|374724431|gb|EHR76511.1| small subunit ribosomal protein S3Ae [uncultured marine group II
euryarchaeote]
Length = 321
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 2 DPFAKKDWYDIKAP-SCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHA 60
D + K WY I+AP + + +G+T+ + E + RV+E++ + +
Sbjct: 18 DKWKMKRWYTIRAPRHPWEFKKIGETIGE-------SDEHIMGRVYEMTQQEFNGDFTKM 70
Query: 61 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCI 120
+ +R R + G++ LT F G TD +R +R++ ++ VDV +TD + +RL +
Sbjct: 71 HVILRFRVTECVGQDALTTFIGHHHQTDHIRRQIRRYRGKVDDVVDVVSTDGYLVRLKPL 130
Query: 121 GFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
T++ QTS + +R K RE++VA AA + + + + E+ KA
Sbjct: 131 IITQK---------RVQTSIKQAMRAKARELIVAFAAKSTFAKIQTQILDGTLEEELRKA 181
Query: 181 TSSIYPLQNVFIRKVKILKAPKF-DLGK-LMEVHGD 214
IYP+++V IRK ++L+ D GK L E+H +
Sbjct: 182 VKPIYPVKSVAIRKSQLLQTGVVADSGKTLDEIHAE 217
>gi|444731548|gb|ELW71901.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 102
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 150 EIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 209
EIM + + +K +V K I + IG++ EK SI PL + F+RK K+ K PKF+LGKLM
Sbjct: 2 EIMTQEMQTNKIKEVVNKLIPDSIGKDTEKGCQSIQPLYDEFVRKAKVQKKPKFELGKLM 61
Query: 210 EVHGDYSEDVGVKVD 224
E+HGD S G + D
Sbjct: 62 ELHGDGSAKAGDQTD 76
>gi|110456351|gb|ABG74701.1| ribosomal protein S3a-like protein [Diaphorina citri]
Length = 85
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 7/82 (8%)
Query: 160 DLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 216
DLK +V K + + I +EIEK IYPL +VFIRKVK+LK P+F+L KL+E+HG+
Sbjct: 3 DLKEVVNKLLPDSIAKEIEKKCQGIYPLHDVFIRKVKVLKKPRFELSKLLELHGEGKGGA 62
Query: 217 --EDVGVKVDRPA--DEPIPEA 234
++ G VDRP + P+ EA
Sbjct: 63 TIDESGETVDRPEGYEPPVQEA 84
>gi|448420596|ref|ZP_21581343.1| 30S ribosomal protein S3Ae [Halosarcina pallida JCM 14848]
gi|445673747|gb|ELZ26307.1| 30S ribosomal protein S3Ae [Halosarcina pallida JCM 14848]
Length = 215
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F +GKT+ E + R EV+LGDL ++ K+
Sbjct: 13 KRWYTLVAPEQFDREELGKTMADE-------PEKVYGRTVEVTLGDLTGDQGANNTKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV + T F D LRSLVR+ + I A + V T D++ ++L + FT
Sbjct: 66 KVNDVSSDSAYTEFIKHELARDYLRSLVRRGASKISASITVLTKDDYRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEK-FIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A + LV+ +A + I +IY
Sbjct: 123 ------TKKADRSQEKAIRRVMIDFVEEAAEDRTFEELVDSAVVAGNLSSAIYGEAKTIY 176
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K+ + P
Sbjct: 177 PLRRVEVQKLTLEARP 192
>gi|410720403|ref|ZP_11359759.1| ribosomal protein S3AE [Methanobacterium sp. Maddingley MBC34]
gi|410601185|gb|EKQ55705.1| ribosomal protein S3AE [Methanobacterium sp. Maddingley MBC34]
Length = 196
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I P F +G T E L R E ++ +L + Y
Sbjct: 11 DTWKDKQWYTITTPKEFGDAEIGTTPARE-------PEMLLKRRVESTMRELTGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + +V G T F G T+D +RS++R+ + I+A V ++ D +++ +
Sbjct: 64 VKLKFQISEVAGDTATTKFIGHQVTSDYVRSMIRRGSSRIDAIVKAESKDGQKMKIHVLA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T +KR A++SQ R IR + +++V +A + LVE I + + T
Sbjct: 124 IT------IKR---AKSSQQRYIRETVEKLVVDASAQKNFVELVEDIIGGKMASYVYHET 174
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
IYPL+ V + K K++ K
Sbjct: 175 KKIYPLKRVEVIKTKVIDEKK 195
>gi|340623754|ref|YP_004742207.1| 30S ribosomal protein S3Ae [Methanococcus maripaludis X1]
gi|339904022|gb|AEK19464.1| 30S ribosomal protein S3Ae [Methanococcus maripaludis X1]
Length = 225
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WYDI P F G ++ +T A+ L R+ E+SL DL NE
Sbjct: 17 DTWKSKVWYDIYTPQSF-----GGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSKHM 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + + V G N + F G T + L+S VR+ + I A V+V+T D F +R+ +
Sbjct: 70 TRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ +IR +M +I+ A V + +G +I
Sbjct: 130 LT---------AVRARDHHKTEIRVRMEQIIKEMAKETSFAEFVHAMLMGGLGSKIYGDC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGK 207
++PL ++V+I K+ + GK
Sbjct: 181 KKMFPL-----KRVEIFKSEVIEFGK 201
>gi|408382794|ref|ZP_11180336.1| 30S ribosomal protein S3Ae [Methanobacterium formicicum DSM 3637]
gi|407814596|gb|EKF85221.1| 30S ribosomal protein S3Ae [Methanobacterium formicicum DSM 3637]
Length = 196
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I P F +G T E L R E ++ +L + Y
Sbjct: 11 DTWKDKQWYTITTPKEFGDAEIGTTPARE-------PEMLLKRRVESTMRELTGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K++ + +V G T F G T+D +RS++R+ + I+A V ++ D +++ +
Sbjct: 64 VKLKFQISEVAGDTATTKFIGHQVTSDYVRSMIRRGTSRIDAIVKAESKDGQKMKIHVLA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T +KR A++SQ R IR + +++V A+ + LVE I + + T
Sbjct: 124 IT------IKR---AKSSQQRYIRETVEKLVVDAASQKNFVELVEDIIGGKLASYVYHET 174
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
IYPL+ V + K K++ K
Sbjct: 175 KKIYPLKRVEVIKTKVIDEKK 195
>gi|45358232|ref|NP_987789.1| 30S ribosomal protein S3Ae [Methanococcus maripaludis S2]
gi|59798731|sp|Q6LZG0.1|RS3A_METMP RecName: Full=30S ribosomal protein S3Ae
gi|44920989|emb|CAF30225.1| SSU ribosomal protein S3AE [Methanococcus maripaludis S2]
Length = 225
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WYDI P F G ++ +T A+ L R+ E+SL DL NE
Sbjct: 17 DTWKSKVWYDIYTPQSF-----GGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSKHM 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + + V G N + F G T + L+S VR+ + I A V+V+T D F +R+ +
Sbjct: 70 TRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ +IR +M +I+ A V + +G +I
Sbjct: 130 LT---------AVRARDHHKTEIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYGDC 180
Query: 182 SSIYPLQNVFIRKVKILKAPKFDLGK 207
++PL ++V+I K+ + GK
Sbjct: 181 KKMFPL-----KRVEIFKSEVIEFGK 201
>gi|296243074|ref|YP_003650561.1| 30S ribosomal protein S3AE [Thermosphaera aggregans DSM 11486]
gi|296095658|gb|ADG91609.1| SSU ribosomal protein S3AE [Thermosphaera aggregans DSM 11486]
Length = 215
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY++ AP F ++G T + L RV E +L DL + +
Sbjct: 13 DKWKMKKWYEVLAPKAFGEVSLGTTPAD-------DPDKLIGRVVETTLYDLTGDISQVH 65
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + V+ T F G D ++SL+R+ + ++ DV T D + +RL
Sbjct: 66 VKLYFQIVSVEEGKAYTRFKGHELARDYMKSLIRRKSSKVQGIFDVTTKDGYVVRLTIAA 125
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T + ++SQ R IRR +++ + ++ + LV + ++ I EI +
Sbjct: 126 LT---------SFRCKSSQRRAIRRIIKDYIFSKTPGLIMDELVNEILSGKISNEIAELA 176
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ V + K K++ P
Sbjct: 177 RKIYPIRRVEVYKSKLIMIP 196
>gi|389846621|ref|YP_006348860.1| 30S ribosomal protein S3Ae [Haloferax mediterranei ATCC 33500]
gi|448615707|ref|ZP_21664470.1| 30S ribosomal protein S3Ae [Haloferax mediterranei ATCC 33500]
gi|388243927|gb|AFK18873.1| 30S ribosomal protein S3Ae [Haloferax mediterranei ATCC 33500]
gi|445751838|gb|EMA03269.1| 30S ribosomal protein S3Ae [Haloferax mediterranei ATCC 33500]
Length = 218
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 16/218 (7%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G T E + R E +LG+L N++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGATFADE-------PEKVYGRTVESTLGELNNDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV G + T F T D LRSLVR+ + +EA V T D+ ++L + FT
Sbjct: 66 KVNDVGGDSAYTEFVQQELTRDYLRSLVRRGASKVEANVTAVTKDDHRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M ++ SL E + + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMIDLTQEAITGHTYDSLTESVVEGRLSSAIYGDAKQIYP 176
Query: 187 LQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVD 224
L+ V ++K + P+ + EDV V VD
Sbjct: 177 LRRVEVKKFSLEARPEEIEAEEEAAVSVDEEDVAVDVD 214
>gi|336122301|ref|YP_004577076.1| 30S ribosomal protein S3Ae [Methanothermococcus okinawensis IH1]
gi|334856822|gb|AEH07298.1| 30S ribosomal protein S3Ae [Methanothermococcus okinawensis IH1]
Length = 234
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I P F G L+ T + + RV E SL DL N+
Sbjct: 17 DTWKTKSWYNIYTPQTF-----GGDLIGHTPANDPSL--VIGRVAETSLKDLTNDHSKHM 69
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + + V G N T F G T + L+SL+R+ + I DV+T D + +R+ +
Sbjct: 70 VRMYFKIDGVSGTNATTQFVGHDTTREYLKSLIRRRRSKITTVTDVRTKDGYKIRVKSMV 129
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ IR+KM EI+ A + V+ + +G +I
Sbjct: 130 LT---------AVRARDHHKTDIRKKMEEIVRDMAKNATFPEFVQAMLLGGLGSKIYGEC 180
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
I+P++ V I K ++L+ K
Sbjct: 181 RKIFPMKRVEIYKSEVLEFGK 201
>gi|254167322|ref|ZP_04874174.1| Ribosomal S3Ae family [Aciduliprofundum boonei T469]
gi|197623585|gb|EDY36148.1| Ribosomal S3Ae family [Aciduliprofundum boonei T469]
Length = 241
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F + +G T K+ R+ E +L DL + + +
Sbjct: 16 DKWRAKVWYTIIAPDTFSAKELGMT--PANDPNKVIG-----RIAEATLYDLTGDFKKMH 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + +QG N T F G TTD +R +VR+ + I+A V T D + LR+ I
Sbjct: 69 VKLYFKINRIQGTNAYTRFIGHDMTTDYIRRMVRRRRSRIDAIFPVLTADGYKLRVKVIA 128
Query: 122 FT-KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
KR+ + +K +IR+K+ + + A+A V+ ++E + +++ K
Sbjct: 129 VPDKRIKSSIK----------SEIRKKIMDYLFAKATEMTFSEYVKYLLSEDVRKDLSKV 178
Query: 181 TSSIYPLQNVFIRKVKILKAP 201
+YP++ + +RK ++L P
Sbjct: 179 VKPVYPVRRIEVRKSEVLVFP 199
>gi|269863472|ref|XP_002651235.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220064903|gb|EED42822.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 207
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----H 59
F+K +Y++ + F + N G T + + + + L R F V+ GDL + +
Sbjct: 28 FSKNKFYNLTS-RLFPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVN 86
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 87 SPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFV 146
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAE 171
TK+ P+ +K YA+ S+I+ IR+++ E + +++ LV+ E
Sbjct: 147 NAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTE 197
>gi|333910555|ref|YP_004484288.1| 30S ribosomal protein S3 [Methanotorris igneus Kol 5]
gi|333751144|gb|AEF96223.1| 30S ribosomal protein S3Ae [Methanotorris igneus Kol 5]
Length = 231
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I F G L+ +T + + + RV EVSL DL N+
Sbjct: 16 DTWKTKVWYNIYTAQEF-----GGVLIGQTPASDPSL--VIGRVAEVSLRDLTNDPTKHM 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + V G N ++ F G T + L+S +R+ + I+A VDV+T D + +R+ I
Sbjct: 69 IRVYFKIYGVSGTNAVSQFVGHDTTREYLKSQIRRRRSKIDAIVDVRTKDGYKIRVKAIT 128
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ Q IR+KM EI+ A + V+ + + I +
Sbjct: 129 LT---------AVRARARQKTAIRKKMMEIIKAMSEEKTFPEYVQAMLMGEMANRIHEEC 179
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
I+PL++V I K ++L+ K
Sbjct: 180 KKIFPLKSVMIYKSEVLEFGK 200
>gi|67764190|gb|AAY79226.1| 40S ribosomal protein S3a [Siniperca chuatsi]
Length = 80
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 11/76 (14%)
Query: 169 IAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDV 219
I + +G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D
Sbjct: 3 IPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGSAAKASGDDT 62
Query: 220 GVKVDRP--ADEPIPE 233
G KV+R + PI E
Sbjct: 63 GAKVERADGYEPPIQE 78
>gi|222479053|ref|YP_002565290.1| 30S ribosomal protein S3Ae [Halorubrum lacusprofundi ATCC 49239]
gi|254764502|sp|B9LTT6.1|RS3A_HALLT RecName: Full=30S ribosomal protein S3Ae
gi|222451955|gb|ACM56220.1| ribosomal protein S3Ae [Halorubrum lacusprofundi ATCC 49239]
Length = 215
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL + + R +LG+L + K+
Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEE-------PDQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A +S V+ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKLIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V I+K+ + P
Sbjct: 176 PLRRVEIQKLTLEARP 191
>gi|325960009|ref|YP_004291475.1| 30S ribosomal protein S3Ae [Methanobacterium sp. AL-21]
gi|325331441|gb|ADZ10503.1| 30S ribosomal protein S3Ae [Methanobacterium sp. AL-21]
Length = 194
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY I P F + +G T E L R E SL +L + Y
Sbjct: 11 DTWKEKQWYTIMTPKDFGDQEIGTTPAR-------EPEQLMKRRVESSLRELTGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ +V G T+F G TTD +RS++R+ + I++ V+V + D L++ +
Sbjct: 64 IKLFFEINEVAGDTATTSFVGHQVTTDYVRSMIRRGTSRIDSIVNVTSQDGVKLKVHVLA 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T +KR A++SQ + IR M +++ A + L+E + + I +
Sbjct: 124 IT------IKR---AKSSQQKFIRETMEKMVQNAAKDKKFQELIEDILGGKMASHIYHES 174
Query: 182 SSIYPLQNVFIRKVKIL 198
IYPL+ V K +++
Sbjct: 175 KKIYPLKRVETIKTRVI 191
>gi|444724816|gb|ELW65406.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 114
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 153 VAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 212
+ A C LK V K I + IG+EIEKA SIYPL +V +RKVK+LK PKF+L KLME H
Sbjct: 24 LGSADKC-LKEKVNKLILDSIGKEIEKAYQSIYPLHDVSVRKVKMLKKPKFELRKLMEFH 82
Query: 213 GDYS 216
G+ S
Sbjct: 83 GEGS 86
>gi|290995023|ref|XP_002680131.1| predicted protein [Naegleria gruberi]
gi|284093750|gb|EFC47387.1| predicted protein [Naegleria gruberi]
Length = 261
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Query: 39 EGLKHRVFEVSLGDLLN--EEEHAYRKIRLRAEDVQ-GKNVLTNFWGMSFTTDKLRSLVR 95
E + R EVS D++ +EE + ++L+ +V K+ T F G + DKL SL+
Sbjct: 90 EKILDRTVEVSAPDIIPSLKEELNHNIVKLKINNVALRKHAETEFNGFRLSQDKLASLIG 149
Query: 96 KWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQ 155
K + I + K+ D + +R+ I T+ Q+K+T YA SQI +IR M +++
Sbjct: 150 KGRSTITLNQEFKSLDGYKIRIAMIVSTRMTELQLKKTSYASKSQIHKIRTVMAQVLTKH 209
Query: 156 AASCDLKSLVEKFIAEV-IGREIEKATSSIYPLQN-VFIRKVKILKAP 201
+ ++ VE+ + +G EI +IYPL++ + I K+K+++ P
Sbjct: 210 ISKMNILEFVEQMAIKCGMGAEIRTKCENIYPLEDHIQITKIKVVEKP 257
>gi|448602705|ref|ZP_21656640.1| 30S ribosomal protein S3Ae [Haloferax sulfurifontis ATCC BAA-897]
gi|445747057|gb|ELZ98514.1| 30S ribosomal protein S3Ae [Haloferax sulfurifontis ATCC BAA-897]
Length = 221
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G T E + R E +LGDL +++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGSTFADE-------PEKINGRTVESTLGDLNDDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV T F T D LRSLVR+ + IEA V T D++ ++L + FT
Sbjct: 66 KITDVGSDAAYTEFIQQELTRDYLRSLVRRGASKIEANVTAITKDDYRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M E+ +L E + + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMTELTREAITGHTYDALTESVVEGRLSSAIYGDAKVIYP 176
Query: 187 LQNVFIRKVKI 197
L+ V ++K +
Sbjct: 177 LRRVEVKKFSL 187
>gi|374630492|ref|ZP_09702877.1| SSU ribosomal protein S3AE [Methanoplanus limicola DSM 2279]
gi|373908605|gb|EHQ36709.1| SSU ribosomal protein S3AE [Methanoplanus limicola DSM 2279]
Length = 201
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F +G T+ E + RV + +LG++ + K+R
Sbjct: 18 KSWYKVYAPENFDKAYLGDTISNE-------PEKVYGRVMQTTLGEMTQDYSKQNIKMRF 70
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ +V G + T+F G T D LR++V++ + I++ V + T D LR+ FT
Sbjct: 71 KVNNVAGDSAYTDFVGHEVTKDYLRAMVKRRTSRIDSIVLLTTKDGRKLRVTTTCFT--- 127
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
+ R A +SQ IR+ + + + A+AA + V++ + I RE+ K I+P
Sbjct: 128 ---INR---ADSSQAHAIRQAITDSVKARAAELSYEQFVKEMVLGDISREVFKLVKKIHP 181
Query: 187 LQNVFIRKVKILKAP 201
++ V + K K ++A
Sbjct: 182 VRRVEVIKSKGIEAS 196
>gi|448549700|ref|ZP_21628305.1| 30S ribosomal protein S3Ae [Haloferax sp. ATCC BAA-645]
gi|445712748|gb|ELZ64529.1| 30S ribosomal protein S3Ae [Haloferax sp. ATCC BAA-645]
Length = 220
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G T E + R E +LGDL +++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGSTFADE-------PEKISGRTVESTLGDLNDDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV T F T D LRSLVR+ + IEA V T D++ ++L + FT
Sbjct: 66 KITDVGSDAAYTEFIQQELTRDYLRSLVRRGASKIEANVTAITKDDYRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M E+ +L E + + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMTELTREAITGHTYDALTESVVEGRLSSAIYGDAKVIYP 176
Query: 187 LQNVFIRKVKI 197
L+ V ++K +
Sbjct: 177 LRRVEVKKFSL 187
>gi|300711526|ref|YP_003737340.1| 30S ribosomal protein S3Ae [Halalkalicoccus jeotgali B3]
gi|448296367|ref|ZP_21486425.1| 30S ribosomal protein S3Ae [Halalkalicoccus jeotgali B3]
gi|299125209|gb|ADJ15548.1| 30S ribosomal protein S3Ae [Halalkalicoccus jeotgali B3]
gi|445581692|gb|ELY36043.1| 30S ribosomal protein S3Ae [Halalkalicoccus jeotgali B3]
Length = 194
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 41 LKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTL 100
L R E +LG+L N K+ + DV + T F T D LRSLVR+ +
Sbjct: 23 LLGRNLETTLGELTNNASENNIKLTFKINDVGSDSAYTEFTKHELTRDYLRSLVRRGASK 82
Query: 101 IEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCD 160
I+AYV V TTD++ +++ + FT T A SQ IR +M E++ A
Sbjct: 83 IDAYVTVLTTDDYRVQVQPVAFT---------TKKADHSQEHAIRNRMIEMVREAGAERT 133
Query: 161 LKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 197
+ LV+ I + I +IYPL+ V I+K+ +
Sbjct: 134 FEGLVDSVIEGRLSSAIYGEAKTIYPLRRVEIQKLTL 170
>gi|313126835|ref|YP_004037105.1| 30S ribosomal protein S3ae [Halogeometricum borinquense DSM 11551]
gi|448288699|ref|ZP_21479897.1| 30S ribosomal protein S3Ae [Halogeometricum borinquense DSM 11551]
gi|312293200|gb|ADQ67660.1| SSU ribosomal protein S3AE [Halogeometricum borinquense DSM 11551]
gi|445569084|gb|ELY23659.1| 30S ribosomal protein S3Ae [Halogeometricum borinquense DSM 11551]
Length = 215
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F +G+T+ E + R EV+LGDL ++ K+
Sbjct: 13 KRWYTLIAPEQFDREELGETMADE-------PEKVDGRTIEVTLGDLTGDQGANNTKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV + T F D LRSLVR+ + I A + V T D++ +++ + FT
Sbjct: 66 KVNDVSSDSAYTEFIKHELARDYLRSLVRRGASKISASITVLTKDDYRVQIQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAE-VIGREIEKATSSIY 185
T A SQ + IRR M + + A + LV+ + + + I +IY
Sbjct: 123 ------TKKADRSQEQAIRRVMIDFVEEAAQERTFEELVDSAVVDGRLSSAIYGEAKTIY 176
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K+ + P
Sbjct: 177 PLRRVEVQKLTLEARP 192
>gi|254166723|ref|ZP_04873577.1| Ribosomal S3Ae family [Aciduliprofundum boonei T469]
gi|289596310|ref|YP_003483006.1| ribosomal protein S3Ae [Aciduliprofundum boonei T469]
gi|197624333|gb|EDY36894.1| Ribosomal S3Ae family [Aciduliprofundum boonei T469]
gi|289534097|gb|ADD08444.1| ribosomal protein S3Ae [Aciduliprofundum boonei T469]
Length = 241
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I AP F + +G T K+ R+ E +L DL + + +
Sbjct: 16 DKWRAKVWYTIIAPDTFSAKELGMT--PANDPNKVIG-----RIAEATLYDLTGDFKKMH 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + +QG N T F G TTD +R +VR+ + I+A V T D + LR+ I
Sbjct: 69 VKLYFKINRIQGTNAYTRFIGHEMTTDYIRRMVRRRRSRIDAIFPVLTADGYKLRVKVIA 128
Query: 122 FT-KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
KR+ + +K +IR+K+ + + A+A V+ ++E + +++ K
Sbjct: 129 VPDKRIKSSIK----------SEIRKKIMDYLFAKATEMTFSEYVKYLLSEDVRKDLSKV 178
Query: 181 TSSIYPLQNVFIRKVKILKAP 201
YP++ + +RK ++L P
Sbjct: 179 VKPAYPVRRIEVRKSEVLVFP 199
>gi|395834457|ref|XP_003790218.1| PREDICTED: 40S ribosomal protein S3a-like [Otolemur garnettii]
Length = 181
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 163 SLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 218
S V I + IG++ EK SIYPL+NVFIRKVK+LK P+F+LGKLME+HG S
Sbjct: 100 SRVTNMIPDSIGKDTEKTCQSIYPLRNVFIRKVKMLKKPRFELGKLMELHGKDSSS 155
>gi|146302852|ref|YP_001190168.1| 30S ribosomal protein S3Ae [Metallosphaera sedula DSM 5348]
gi|145701102|gb|ABP94244.1| SSU ribosomal protein S3AE [Metallosphaera sedula DSM 5348]
Length = 216
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEE 58
D + K W+ I +P F ++G T V++T G K+ E +L DL +
Sbjct: 16 DKWKMKKWFSIYSPKVFGEVSLGSTPAFDVSQTMGRKV----------ETTLYDLTGDFS 65
Query: 59 HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
Y + + +G+ + T F G + D +RSLVR+ + I VD+ T D FTLR+
Sbjct: 66 TVYVHLYFKVVRNEGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVK 125
Query: 119 CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
+ T R Q + IR+I M +++ A V++ I + I
Sbjct: 126 TLALT------AYRVHREQATTIRKI---MEDVVKKTAEGKTFDEFVQEMIFGNLANNIF 176
Query: 179 KATSSIYPLQNVFIRKVKILKAPKFDLGK 207
I PL+ I K K+L AP GK
Sbjct: 177 NEAKKIAPLRKAEIEKSKVLFAPLIKEGK 205
>gi|433420453|ref|ZP_20405534.1| 30S ribosomal protein S3Ae [Haloferax sp. BAB2207]
gi|448596490|ref|ZP_21653746.1| 30S ribosomal protein S3Ae [Haloferax alexandrinus JCM 10717]
gi|432199146|gb|ELK55351.1| 30S ribosomal protein S3Ae [Haloferax sp. BAB2207]
gi|445741339|gb|ELZ92842.1| 30S ribosomal protein S3Ae [Haloferax alexandrinus JCM 10717]
Length = 219
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G T E + R E +LGDL +++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGSTFADE-------PEKISGRTVESTLGDLNDDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV T F T D LRSLVR+ + IEA V T D++ ++L + FT
Sbjct: 66 KITDVGSDAAYTEFIQQELTRDYLRSLVRRGASKIEANVTAITKDDYRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M E+ +L E + + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMTELTREAITGHTYDALTESVVEGRLSSAIYGDAKVIYP 176
Query: 187 LQNVFIRKVKI 197
L+ V ++K +
Sbjct: 177 LRRVEVKKFSL 187
>gi|57282912|emb|CAG14950.1| ribosomal protein 10 [Aspergillus niger]
Length = 88
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
DPF +KD + ++AP+ F R+VGKTL RT G K A++ L VF VSL DL +E+HA+
Sbjct: 24 DPFTRKDEFXVRAPAPFHTRDVGKTLANRTSGLKNANDALGA-VFYVSLADLQTDEDHAF 82
Query: 62 RKIRLR 67
R++ LR
Sbjct: 83 RRVNLR 88
>gi|399575060|ref|ZP_10768818.1| SSU ribosomal protein s3ae [Halogranum salarium B-1]
gi|399239328|gb|EJN60254.1| SSU ribosomal protein s3ae [Halogranum salarium B-1]
Length = 220
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY I AP F +G+T E + R EV+LG+L + K+
Sbjct: 13 KRWYSILAPEQFDRAELGETFADEV-------EQINGRTIEVTLGELTGDAGANNTKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV + T F T D LRSLVR+ + I+ V V T D++ +++ + T
Sbjct: 66 KITDVGSDSAYTEFVKHELTRDYLRSLVRRGASKIDVNVTVLTKDDYRVQVQPVALT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ + IR+ M +++ A + LV+ + + I +IYP
Sbjct: 123 ------TKKADNSQEKAIRKVMIDLVEEAAEDHTFEELVDSVVEGRLSSAIYGEAKTIYP 176
Query: 187 LQNVFIRKVKILKAP 201
L+ V I+K+ + P
Sbjct: 177 LRRVEIQKLDLEARP 191
>gi|292655303|ref|YP_003535200.1| 30S ribosomal protein S3a.eR [Haloferax volcanii DS2]
gi|291372949|gb|ADE05176.1| ribosomal protein S3a.eR [Haloferax volcanii DS2]
Length = 220
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G T E + R E +LGDL +++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGSTFADE-------PEKISGRTVESTLGDLNDDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV T F T D LRSLVR+ + IEA V T D++ ++L + FT
Sbjct: 66 KITDVGSDAAYTEFIQQELTRDYLRSLVRRGASKIEANVTAITKDDYRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M E+ +L E + + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMTELTREAITGHTYDALTESVVEGRLSSAIYGDAKVIYP 176
Query: 187 LQNVFIRKVKI 197
L+ V ++K +
Sbjct: 177 LRRVEVKKFSL 187
>gi|269864146|ref|XP_002651470.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220064463|gb|EED42586.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 182
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----H 59
F+K +Y++ + F + N G T + + + + L R F V+ GDL + +
Sbjct: 28 FSKNKFYNLTS-RLFPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVN 86
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 87 SPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFV 146
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQA 156
TK+ P+ +K YA+ S+I+ IR+++ E + +
Sbjct: 147 NAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLGAS 182
>gi|333986599|ref|YP_004519206.1| 30S ribosomal protein S3Ae [Methanobacterium sp. SWAN-1]
gi|333824743|gb|AEG17405.1| 30S ribosomal protein S3Ae [Methanobacterium sp. SWAN-1]
Length = 195
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY I P F +G T E L +R E S+ +L + Y
Sbjct: 11 DTWKEKQWYKIMTPVEFGDAEIGSTPAR-------DPELLINRGVESSMRELAGDFSKQY 63
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ R +V G T F G TTD +RS++R+ + I+A +V T D L++ +G
Sbjct: 64 IKLYFRINNVVGDIANTKFMGHQVTTDYVRSMIRRGTSRIDAISNVTTKDGQKLKVHVLG 123
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T +KR A++SQ + IR M ++ AA+ + +E + + I
Sbjct: 124 IT------IKR---AKSSQQKFIRETMERMVQEAAANKPFQEFIEDIVGGKMASHIYHEA 174
Query: 182 SSIYPLQNVFIRKVKILK 199
IYPL+ V K ++++
Sbjct: 175 KKIYPLKRVETVKTQMIE 192
>gi|448503555|ref|ZP_21613184.1| 30S ribosomal protein S3Ae [Halorubrum coriense DSM 10284]
gi|445691756|gb|ELZ43939.1| 30S ribosomal protein S3Ae [Halorubrum coriense DSM 10284]
Length = 213
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL Q + R +L +L + K+
Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEEPQQ-------VVGRTITTTLDELTGDSNANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDSAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ V+ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFVDAIVDGNLSSAIYGDAKEIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V ++K+ + P+
Sbjct: 176 PLRRVEVQKLTLEARPR 192
>gi|71483074|gb|AAZ32507.1| SSU ribosomal protein S3AE [uncultured euryarchaeote Alv-FOS4]
Length = 225
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY I P F + +G T E + R+ E +L DL + +
Sbjct: 14 DKWRSKVWYTIITPETFSSKEIGMTPADE-------PEKVIGRIAESTLYDLTGNFKKMH 66
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + VQG N T F G TTD +R ++R+ + I+A +V T+D + +R+ +
Sbjct: 67 VKLYFKINRVQGTNAYTRFTGHDMTTDYIRRMIRRRRSRIDAIFNVDTSDGYRMRVKVLT 126
Query: 122 FT-KRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKA 180
+R+ + +K +IR+K++E + +A S V+ +A+ R++ K
Sbjct: 127 VPDRRIKSSIK----------TEIRKKIQEYLTEKAHSMTFSEYVKYLLADETPRDLSKV 176
Query: 181 TSSIYPLQNVFIRKVKILKAPKFDLGKLM 209
IYP++ + IRK ++L P+ + +L+
Sbjct: 177 LKPIYPVKRIEIRKSEVLYFPEEKIVELV 205
>gi|448428552|ref|ZP_21584284.1| 30S ribosomal protein S3Ae [Halorubrum terrestre JCM 10247]
gi|448450258|ref|ZP_21592157.1| 30S ribosomal protein S3Ae [Halorubrum litoreum JCM 13561]
gi|448488443|ref|ZP_21607279.1| 30S ribosomal protein S3Ae [Halorubrum californiensis DSM 19288]
gi|155212924|gb|ABT17451.1| 30S ribosomal protein S3a [Halorubrum sp. TP009]
gi|445676021|gb|ELZ28546.1| 30S ribosomal protein S3Ae [Halorubrum terrestre JCM 10247]
gi|445696133|gb|ELZ48226.1| 30S ribosomal protein S3Ae [Halorubrum californiensis DSM 19288]
gi|445812110|gb|EMA62106.1| 30S ribosomal protein S3Ae [Halorubrum litoreum JCM 13561]
Length = 215
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL Q + R +L +L + K+
Sbjct: 12 QKRWYTVLAPEQFDRQELGETLAEEPQQ-------VVGRTITTTLDELTGDSNANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDSAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ V+ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFVDAIVDGNLSSAIYGDAKEIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V ++K+ + P+
Sbjct: 176 PLRRVEVQKLTLEARPR 192
>gi|448575260|ref|ZP_21641708.1| 30S ribosomal protein S3Ae [Haloferax larsenii JCM 13917]
gi|445731332|gb|ELZ82917.1| 30S ribosomal protein S3Ae [Haloferax larsenii JCM 13917]
Length = 214
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G+T+ E + R EV+LG+L N++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGETMADE-------PEKVYGRTVEVTLGELNNDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV T F T D LRSLVR+ + IEA V T D++ +++ + FT
Sbjct: 66 QVSDVGSDAAYTEFTQQELTRDYLRSLVRRGASKIEANVTALTKDDYRVQVQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M ++ L++ + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMTKLTREAITERTFDDLIDGVTGGRLSSAIYGEAKQIYP 176
Query: 187 LQNVFIRKVKI 197
L+ V ++K +
Sbjct: 177 LRRVEVKKTSL 187
>gi|444729436|gb|ELW69852.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 84
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 173 IGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 214
IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+
Sbjct: 26 IGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 67
>gi|118431343|ref|NP_147748.2| 30S ribosomal protein S3 [Aeropyrum pernix K1]
gi|150421661|sp|Q9YCV8.2|RS3A_AERPE RecName: Full=30S ribosomal protein S3Ae
gi|116062666|dbj|BAA80139.2| 30S ribosomal protein S3Ae [Aeropyrum pernix K1]
Length = 214
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K W+ + AP F G+T++ T + L RV E +L D+ + + +
Sbjct: 8 DTWRLKKWFKVVAPPLF-----GETVLGTTPADD--PDKLIGRVMETTLFDITGDYSYVH 60
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + V+G T F G D +R L R+ + + +V T D + LR+ +
Sbjct: 61 VKMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMA 120
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAE----VIGREI 177
FT ++ C +TSQ IR+ M+EI+ +A L L++ + + I
Sbjct: 121 FT-------RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLI 171
Query: 178 EKATSSIYPLQNVFIRKVKILKAP 201
+++ IYPL+ V I K K+L P
Sbjct: 172 DESARKIYPLRKVEIAKSKLLWVP 195
>gi|448590704|ref|ZP_21650469.1| 30S ribosomal protein S3Ae [Haloferax elongans ATCC BAA-1513]
gi|445734200|gb|ELZ85759.1| 30S ribosomal protein S3Ae [Haloferax elongans ATCC BAA-1513]
Length = 214
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G+T+ E + R EV+LG+L N++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGETMADE-------PEKVYGRTVEVTLGELNNDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV T F T D LRSLVR+ + IEA V T D++ +++ + FT
Sbjct: 66 QVTDVGSDAAYTEFTQQELTRDYLRSLVRRGASKIEANVTALTKDDYRVQVQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M ++ L++ + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMTKLTREAITERTFDDLIDGVTGGRLSSAIYSEAKQIYP 176
Query: 187 LQNVFIRKVKI 197
L+ V ++K +
Sbjct: 177 LRRVEVKKTSL 187
>gi|269865284|ref|XP_002651870.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220063725|gb|EED42186.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 185
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 8/155 (5%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----H 59
F+K +Y++ + F + N G T + + + + L R F V+ GDL + +
Sbjct: 28 FSKNKFYNLTS-RLFPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVN 86
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 87 SPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFV 146
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMV 153
TK+ P+ +K YA+ S+I+ IR+++ E +
Sbjct: 147 NAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTL 179
>gi|448468139|ref|ZP_21599770.1| 30S ribosomal protein S3Ae [Halorubrum kocurii JCM 14978]
gi|445810882|gb|EMA60896.1| 30S ribosomal protein S3Ae [Halorubrum kocurii JCM 14978]
Length = 215
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL + + R +LG+L + K+
Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEE-------PDQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ V+ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFVDAIVDGNLSSAIYGEAKLIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K+ + P
Sbjct: 176 PLRRVEVQKLTLEARP 191
>gi|156937656|ref|YP_001435452.1| 30S ribosomal protein S3Ae [Ignicoccus hospitalis KIN4/I]
gi|166226770|sp|A8AAU3.1|RS3A_IGNH4 RecName: Full=30S ribosomal protein S3Ae
gi|156566640|gb|ABU82045.1| SSU ribosomal protein S3AE [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I P F +VG+T + K+ + +++++ GD H Y
Sbjct: 11 DKWKIKKWYEIITPDVFNNVSVGQTPAD--EAWKLIGRTVDTTLYDIT-GDFTYVHVHVY 67
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+++ D + T F G D +RSL R+ + IE DV T D + LR+
Sbjct: 68 --LQINKVDEEALKAYTIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLRITVDT 125
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
FT QTSQ R IR+ +E++ L ++ + I EI
Sbjct: 126 FT---------AYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVINAMLFGDIAEEISNRA 176
Query: 182 SSIYPLQNVFIRKVKILKAP 201
IYP++ I K K+L P
Sbjct: 177 RKIYPIRRTEIYKSKVLYMP 196
>gi|444730509|gb|ELW70891.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 102
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 161 LKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS 216
L++ V+ + G++IEKA IYPL +VFIRKVK+LK PKF+LGKLME+HG+ S
Sbjct: 14 LRAEVQVLTTDSTGKDIEKACQFIYPLHDVFIRKVKMLKKPKFELGKLMELHGEGS 69
>gi|395821431|ref|XP_003784045.1| PREDICTED: 40S ribosomal protein S3a-like [Otolemur garnettii]
Length = 102
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 7/64 (10%)
Query: 169 IAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGV 221
I + I ++IEKA SIYPL +VF+RK+K+LK PKF+LGKLME+HG+ ++ G
Sbjct: 27 IPDSIRKDIEKACQSIYPLHDVFVRKIKMLKKPKFELGKLMELHGEGRSSGKATGDETGA 86
Query: 222 KVDR 225
KV+R
Sbjct: 87 KVER 90
>gi|395646658|ref|ZP_10434518.1| 30S ribosomal protein S3Ae [Methanofollis liminatans DSM 4140]
gi|395443398|gb|EJG08155.1| 30S ribosomal protein S3Ae [Methanofollis liminatans DSM 4140]
Length = 199
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLK--HRVFEVSLGDLLNEEEHAYRKI 64
K W+ + P F GKT + G I+++ K RV + +LG++ + + K+
Sbjct: 17 KSWFKVYGPESF-----GKTYI----GDTISADPSKVMGRVMQTTLGEISQDYSKQHIKM 67
Query: 65 RLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTK 124
R + V G T F G T D +R LV++ + I+A + V T DN +RL FT
Sbjct: 68 RFKVNSVAGDAAYTEFVGHEITRDYMRGLVKRKTSRIDAIILVPTKDNKKVRLTVTCFTI 127
Query: 125 RLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSI 184
N SQ IR + + + QAA + + +A + +E K +I
Sbjct: 128 NRAND---------SQAHAIRGAIMKTVAEQAAQMSFEEFSKMVVAGDLAKEAFKVVKAI 178
Query: 185 YPLQNVFIRKVKI 197
+P++ V I K K+
Sbjct: 179 FPVRRVEIIKSKV 191
>gi|374633092|ref|ZP_09705459.1| ribosomal protein S3AE [Metallosphaera yellowstonensis MK1]
gi|373524576|gb|EHP69453.1| ribosomal protein S3AE [Metallosphaera yellowstonensis MK1]
Length = 231
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K W+ I +P F ++G T AS+ + +V E +L DL + Y
Sbjct: 29 DKWKMKKWFTILSPKIFGEVSLGSTPAFD------ASQAMNRKV-ETTLYDLTGDFSTVY 81
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
+ + +G + T F G + D +RSLVR+ + I +DV T D + +R+ +
Sbjct: 82 VHLYFKVSRNEGDKLFTRFAGHELSRDYVRSLVRRKSSKINKVIDVTTKDGYVIRVKGLA 141
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T R AQ ++IR+I M E+M A V++ I + +I
Sbjct: 142 LT------AYRVHRAQATEIRRI---MEEMMRKSAEVHTFNEFVQEMIFGKLANDIFNEA 192
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
I PL+ I K K+L P+
Sbjct: 193 KKIAPLRKAEIEKSKVLSIPE 213
>gi|448456444|ref|ZP_21595213.1| 30S ribosomal protein S3Ae [Halorubrum lipolyticum DSM 21995]
gi|445811920|gb|EMA61917.1| 30S ribosomal protein S3Ae [Halorubrum lipolyticum DSM 21995]
Length = 215
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL + + R +LG+L + K+
Sbjct: 12 QKRWYTVLAPEQFDRQELGETLAEE-------PDQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ V+ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFVDAIVDGNLSSAIYGEAKLIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K+ + P
Sbjct: 176 PLRRVEVQKLTLEARP 191
>gi|332796505|ref|YP_004458005.1| 30S ribosomal protein S3Ae [Acidianus hospitalis W1]
gi|332694240|gb|AEE93707.1| ribosomal protein S3Ae [Acidianus hospitalis W1]
Length = 208
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEE 58
D + K WY I AP F +G T V+ T G K+ E +L DL +
Sbjct: 11 DKWKLKKWYTILAPKVFGEVVLGSTPAFDVSYTIGRKV----------ETTLYDLTGDFS 60
Query: 59 HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF 118
Y + + G ++T+F+G + D +RSLVR+ + I DV+T D + LR+
Sbjct: 61 MVYIHLYFKVVSHDGDKLITSFYGHELSRDYVRSLVRRKSSKINEITDVRTKDGYLLRVK 120
Query: 119 CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIE 178
+ T ++ +RT IR+ M +++ A ++ + + +I
Sbjct: 121 GLALTTYRVHREQRTA---------IRKIMEDLIKKDAEGRTFDEFIQDMVFGKLANDIF 171
Query: 179 KATSSIYPLQNVFIRKVKILKAP 201
I PL+ V I K K+L+AP
Sbjct: 172 NEAKKIAPLRKVEIEKSKLLEAP 194
>gi|448624976|ref|ZP_21670743.1| 30S ribosomal protein S3Ae [Haloferax denitrificans ATCC 35960]
gi|445748738|gb|EMA00184.1| 30S ribosomal protein S3Ae [Haloferax denitrificans ATCC 35960]
Length = 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 18/192 (9%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F + +G T E + R E +LGDL +++ K+
Sbjct: 13 KRWYTVIAPENFDRKELGSTFADE-------PEKINGRTVESTLGDLNDDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV T F T D LRSLVR+ + IEA V T D++ ++L + FT
Sbjct: 66 KITDVGSDAAYTEFIQQELTRDYLRSLVRRGASKIEANVTAITKDDYRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKM-REIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
K+ +Q +IR+I K+ RE + +S+VE ++ I + + IY
Sbjct: 123 ---TKKADRSQEHEIRRIMTKLTREAITGHTYDALTESVVEGRLSSAIYGDAK----VIY 175
Query: 186 PLQNVFIRKVKI 197
PL+ V ++K +
Sbjct: 176 PLRRVEVKKFSL 187
>gi|448481600|ref|ZP_21604951.1| 30S ribosomal protein S3Ae [Halorubrum arcis JCM 13916]
gi|448507442|ref|ZP_21615003.1| 30S ribosomal protein S3Ae [Halorubrum distributum JCM 9100]
gi|448523291|ref|ZP_21618644.1| 30S ribosomal protein S3Ae [Halorubrum distributum JCM 10118]
gi|445698565|gb|ELZ50607.1| 30S ribosomal protein S3Ae [Halorubrum distributum JCM 9100]
gi|445701690|gb|ELZ53666.1| 30S ribosomal protein S3Ae [Halorubrum distributum JCM 10118]
gi|445821853|gb|EMA71637.1| 30S ribosomal protein S3Ae [Halorubrum arcis JCM 13916]
Length = 215
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL Q + R +L +L + K+
Sbjct: 12 QKRWYTVLAPEQFDRQELGETLAEEPQQ-------VVGRTITTTLDELTGDSNANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDSAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ V+ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFVDAIVDGNLSSAIYGDAKEIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K+ + P
Sbjct: 176 PLRRVEVQKLTLEARP 191
>gi|448613016|ref|ZP_21662896.1| 30S ribosomal protein S3Ae [Haloferax mucosum ATCC BAA-1512]
gi|445739913|gb|ELZ91419.1| 30S ribosomal protein S3Ae [Haloferax mucosum ATCC BAA-1512]
Length = 218
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + AP F +G+T E + R E +LG+L N++ K+
Sbjct: 13 KRWYTVIAPENFDREELGETFADE-------PEKIYGRTVESTLGELNNDQGANNVKLTF 65
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ DV G T F T D LRSLVR+ + +EA V T D+ ++L + FT
Sbjct: 66 KINDVGGDAAYTEFIKQELTRDYLRSLVRRGASKVEANVTAVTKDDHRVQLQPVAFT--- 122
Query: 127 PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYP 186
T A SQ +IRR M ++ +L E + + I IYP
Sbjct: 123 ------TKKADRSQEHEIRRIMIDLTREAITEHTYDALTESVVEGRLSSAIYGDAKQIYP 176
Query: 187 LQNVFIRKVKI 197
L+ V ++K +
Sbjct: 177 LRRVEVKKFSL 187
>gi|374637042|ref|ZP_09708561.1| ribosomal protein S3Ae [Methanotorris formicicus Mc-S-70]
gi|373557135|gb|EHP83613.1| ribosomal protein S3Ae [Methanotorris formicicus Mc-S-70]
Length = 218
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + K WY+I F G L+ +T + + + RV EVSL DL N+
Sbjct: 16 DTWKTKVWYNIHTAPEF-----GGVLIGQTPASDPSL--VIGRVAEVSLRDLTNDPTKHM 68
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
++ + V G N ++ F G + T + L+S +R+ + I+A VDV+T D + +R+ +
Sbjct: 69 IRVYFKIYGVSGTNAVSQFIGHNTTREYLKSQIRRRRSRIDAIVDVRTKDGYKVRVKAMT 128
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T A+ +Q QIR+KM EI+ A + V+ + + I
Sbjct: 129 LT---------AVRARANQKTQIRKKMIEIIKAMSKEKTFPEYVQAMLMGEMASNIYGEC 179
Query: 182 SSIYPLQNVFIRKVKILKAPK 202
I+P+++V I K ++L+ K
Sbjct: 180 KKIFPMKSVIIYKSEVLEFGK 200
>gi|448445504|ref|ZP_21590402.1| 30S ribosomal protein S3Ae [Halorubrum saccharovorum DSM 1137]
gi|445685028|gb|ELZ37390.1| 30S ribosomal protein S3Ae [Halorubrum saccharovorum DSM 1137]
Length = 215
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL + + R +LG+L + K+
Sbjct: 12 QKRWYTVLAPEQFDRQELGETLAEE-------PDQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ ++ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFIDAIVDGNLSSAIYGEAKLIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K+ + P
Sbjct: 176 PLRRVEVQKLTLEARP 191
>gi|444725213|gb|ELW65788.1| 40S ribosomal protein S3a [Tupaia chinensis]
Length = 119
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 161 LKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD------ 214
LK V K I + IG++ EKA SI PL +VFIRK K+L+ PKF+ GKL E+HG+
Sbjct: 36 LKEAVNKLIPDCIGKDTEKACQSICPLHDVFIRKAKMLEKPKFESGKLKELHGEGGSSGK 95
Query: 215 -YSEDVGVKVDR 225
++ G KV+R
Sbjct: 96 ATGDETGAKVER 107
>gi|448472558|ref|ZP_21601182.1| 30S ribosomal protein S3Ae [Halorubrum aidingense JCM 13560]
gi|445819862|gb|EMA69696.1| 30S ribosomal protein S3Ae [Halorubrum aidingense JCM 13560]
Length = 215
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL SE + R +LG+L + K+
Sbjct: 12 QKRWYTVLAPEQFDRQELGETLAEE------PSE-VVGRTITTTLGELTGDSGANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDTAYTEFITYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ V+ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFVDAIVDGNLSSAIYGEAKLIY 175
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K+ + P
Sbjct: 176 PLRRVEVQKLTLEARP 191
>gi|269865976|ref|XP_002652112.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
gi|220063134|gb|EED41944.1| SSU ribosomal protein S3AE [Enterocytozoon bieneusi H348]
Length = 173
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 4 FAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----H 59
F+K +Y++ + F + N G T + + + + L R F V+ GDL + +
Sbjct: 28 FSKNKFYNLTS-RLFPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVN 86
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
+ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F
Sbjct: 87 SPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFV 146
Query: 120 IGFTKRL-PNQVKRTCYAQTSQIRQIRR 146
TK+ P+ +K YA+ S+I+ IR+
Sbjct: 147 NAVTKKKNPDSLKH--YAKASEIKIIRK 172
>gi|413956677|gb|AFW89326.1| hypothetical protein ZEAMMB73_166147 [Zea mays]
Length = 83
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 1 ADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEH 59
DPF+KKDWYDIKAPS F VRN+GKTLV+RTQGT++ L VF L E H
Sbjct: 21 VDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTRVCFS-LIIDVFPYCPYILCCELAH 78
>gi|84490085|ref|YP_448317.1| 30S ribosomal protein S3Ae [Methanosphaera stadtmanae DSM 3091]
gi|84373404|gb|ABC57674.1| 30S ribosomal protein S3Ae [Methanosphaera stadtmanae DSM 3091]
Length = 191
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAY 61
D + +K WY+I AP F ++G + E L R E S+ ++ + Y
Sbjct: 10 DTWKEKIWYEILAPQEFDDASLGTSPARE-------PEMLVGRKIETSMREITGDFSRQY 62
Query: 62 RKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIG 121
K+ + V G+ T F G TTD +RS++R+ + I+ D T D + + +
Sbjct: 63 VKLFFEVDHVSGEVAHTVFTGHKVTTDYVRSMIRRGTSRIDTITDATTKDGKKINVHMLA 122
Query: 122 FTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKAT 181
T VKR A++SQ + IR M+ +++ AA + LV++ I+ I
Sbjct: 123 IT------VKR---AKSSQQKLIRETMQNMIIESAAEKTTEELVKEIISGKFASSIYHEA 173
Query: 182 SSIYPLQNVFIRKVKIL 198
IYPL+ V K +IL
Sbjct: 174 KKIYPLKKVETIKSRIL 190
>gi|448530653|ref|ZP_21620789.1| 30S ribosomal protein S3Ae [Halorubrum hochstenium ATCC 700873]
gi|445707830|gb|ELZ59679.1| 30S ribosomal protein S3Ae [Halorubrum hochstenium ATCC 700873]
Length = 215
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 16/197 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL Q + R +L L + K+
Sbjct: 12 QKRWYTVLAPEQFDRQELGETLAEEPQQ-------VVGRTITTTLDQLTGDSNANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDSAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ ++ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFLDAIVDGNLSSAIYGDAKEIY 175
Query: 186 PLQNVFIRKVKILKAPK 202
PL+ V ++K+ + P+
Sbjct: 176 PLRRVEVQKLTLEARPR 192
>gi|354611503|ref|ZP_09029459.1| 30S ribosomal protein S3Ae [Halobacterium sp. DL1]
gi|353196323|gb|EHB61825.1| 30S ribosomal protein S3Ae [Halobacterium sp. DL1]
Length = 210
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+T E + R E ++ +L + E+ K+
Sbjct: 12 EKRWYTVLAPEEFDRQELGETPAEE-------PEQVYDRTIETTMSELADGGENNV-KLT 63
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV T F T D RSLVR+ + IEA + V TTD++ +++ + +T +
Sbjct: 64 FQVSDVGSDTASTQFVKHELTRDYKRSLVRRGSSKIEATITVLTTDDYRVKVQPVAYTTK 123
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
+Q SQ + IRR M +++ ++L++ I + I ++IY
Sbjct: 124 QADQ---------SQQKAIRRTMIDLVEEAGEERTFEALIDSVIEGRLSSAIYGEANTIY 174
Query: 186 PLQNVFIRKVKILKAP 201
PL+ V ++K + P
Sbjct: 175 PLRRVEVQKATLEAHP 190
>gi|448435154|ref|ZP_21586698.1| 30S ribosomal protein S3Ae [Halorubrum tebenquichense DSM 14210]
gi|445684269|gb|ELZ36652.1| 30S ribosomal protein S3Ae [Halorubrum tebenquichense DSM 14210]
Length = 213
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 6 KKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIR 65
+K WY + AP F + +G+TL Q + R +L L + K+
Sbjct: 12 QKRWYTVLAPEQFDRQELGETLAEEPQQ-------VVGRTITTTLDQLTGDSNANNTKLT 64
Query: 66 LRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 125
+ DV + T F T D LRSLVR+ + +EA + V TTD++ +R+ + T
Sbjct: 65 FKITDVGSDSAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT-- 122
Query: 126 LPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIY 185
T A SQ + IRR M + + A A ++ ++ + + I IY
Sbjct: 123 -------TKKADRSQEKAIRRVMIDKVHAAAEERTFEAFLDAIVDGNLSSAIYGDAKEIY 175
Query: 186 PLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA 227
PL+ V ++K+ + P+ EV + V V D A
Sbjct: 176 PLRRVEVQKLTLEARPR-------EVAAEEEASVDVDADEVA 210
>gi|161529020|ref|YP_001582846.1| 30S ribosomal protein S3Ae [Nitrosopumilus maritimus SCM1]
gi|160340321|gb|ABX13408.1| ribosomal protein S3Ae [Nitrosopumilus maritimus SCM1]
Length = 203
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEH 59
D + +K W + AP F +G +T E RV EV+L D+L + +H
Sbjct: 10 DKWREKRWVTVNAPDSFNNVPIGYVPIT-------DDENAAGRVLEVTLYDILKGDPSQH 62
Query: 60 AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFC 119
Y KI + V G N T F ++ + LRSLVR+ + I +DVKT D + R+
Sbjct: 63 QY-KIYFQINKVDGDNASTIFKRFEYSKEFLRSLVRRGSSKINFIIDVKTKDGYIFRIKV 121
Query: 120 IGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK 179
I T R N TS+ +R R+++ Q ++ V+ I +I
Sbjct: 122 IALTHRQLN---------TSRKHALRLIARDVINKQVPDMTIEQFVQATCYSKINSDIMA 172
Query: 180 ATSSIYPLQNVFIRKVKILK 199
A + +++V + KVK+++
Sbjct: 173 AFKKVIRVRHVGLEKVKLIR 192
>gi|219853212|ref|YP_002467644.1| 30S ribosomal protein S3Ae [Methanosphaerula palustris E1-9c]
gi|254764505|sp|B8GFN8.1|RS3A_METPE RecName: Full=30S ribosomal protein S3Ae
gi|219547471|gb|ACL17921.1| ribosomal protein S3Ae [Methanosphaerula palustris E1-9c]
Length = 198
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 7 KDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRL 66
K WY + P F +G+T+ S L RV +LG++ + + K++
Sbjct: 17 KSWYKVYVPEAFGSTPIGETIAAD-------SANLVGRVMSTTLGEIAQDFAKQHIKMKF 69
Query: 67 RAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL 126
+ V G T F G T D LRSLV++ + I++++ T D KR+
Sbjct: 70 KISRVAGDAAYTEFIGHELTKDYLRSLVKRRTSRIDSHIMGSTKDG-----------KRI 118
Query: 127 PNQVKRTCY----AQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATS 182
V TCY A +SQI IR + M A D ++V+ + I R++
Sbjct: 119 HLTV--TCYTLIGANSSQIHAIRNVISAQMATFVAQNDWATVVDGIVTGSISRDMLAQVK 176
Query: 183 SIYPLQNVFIRKVKI 197
I+P++ + + K KI
Sbjct: 177 GIFPIRRIEVIKSKI 191
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,443,915,852
Number of Sequences: 23463169
Number of extensions: 129206945
Number of successful extensions: 344090
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 342155
Number of HSP's gapped (non-prelim): 1112
length of query: 241
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 103
effective length of database: 9,121,278,045
effective search space: 939491638635
effective search space used: 939491638635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)