Your job contains 1 sequence.
>040062
MIAEKPSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA
TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT
LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT
VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV
VSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQREY
RRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSV
RGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTT
TLSIRVFDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACTRGSQTLWSDRI
TGKVTVLAGNINFWAVGCEDGCLQVSKDI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040062
(689 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q32SG6 - symbol:Q32SG6 "Protein HIRA" species:4... 2445 6.0e-254 1
RGD|1584950 - symbol:Hira "HIR histone cell cycle regulat... 807 2.6e-87 3
MGI|MGI:99430 - symbol:Hira "histone cell cycle regulatio... 806 3.2e-87 3
UNIPROTKB|J9NS10 - symbol:HIRA "Uncharacterized protein" ... 807 1.3e-86 2
FB|FBgn0022786 - symbol:Hira "Hira" species:7227 "Drosoph... 607 1.2e-84 4
UNIPROTKB|P54198 - symbol:HIRA "Protein HIRA" species:960... 807 2.2e-84 2
UNIPROTKB|P79987 - symbol:HIRA "Protein HIRA" species:903... 796 5.1e-83 2
ZFIN|ZDB-GENE-030131-6296 - symbol:hira "HIR histone cell... 778 6.5e-83 2
UNIPROTKB|F1P8Q1 - symbol:HIRA "Uncharacterized protein" ... 771 8.3e-83 2
UNIPROTKB|F1RK64 - symbol:HIRA "Uncharacterized protein" ... 767 8.3e-83 3
UNIPROTKB|F1N3C8 - symbol:Bt.53751 "Uncharacterized prote... 771 2.8e-80 2
UNIPROTKB|F1P261 - symbol:HIRA "Protein HIRA" species:903... 769 3.6e-80 2
UNIPROTKB|F1NNS3 - symbol:HIRA "Protein HIRA" species:903... 760 3.2e-79 2
UNIPROTKB|F1P259 - symbol:HIRA "Protein HIRA" species:903... 760 3.2e-79 2
POMBASE|SPBC31F10.13c - symbol:hip1 "hira protein, histon... 528 1.3e-76 3
UNIPROTKB|F5H4M2 - symbol:HIRA "Protein HIRA" species:960... 699 5.3e-73 2
UNIPROTKB|L7N2F8 - symbol:HIRA "Protein HIRA" species:960... 699 5.3e-73 2
ASPGD|ASPL0000056631 - symbol:AN1286 species:162425 "Emer... 623 1.3e-67 2
SGD|S000000104 - symbol:HIR1 "Subunit of the HIR complex"... 624 1.3e-63 2
DICTYBASE|DDB_G0276423 - symbol:hira "histone cell cycle ... 580 1.5e-59 2
DICTYBASE|DDB_G0277941 - symbol:DDB_G0277941 "WD40 repeat... 418 7.1e-52 2
FB|FBgn0033526 - symbol:Caf1-105 "Caf1-105" species:7227 ... 384 1.2e-32 2
TAIR|locus:2174784 - symbol:FAS2 "AT5G64630" species:3702... 290 1.6e-32 2
ASPGD|ASPL0000014427 - symbol:AN3785 species:162425 "Emer... 316 1.7e-32 3
CGD|CAL0004103 - symbol:CAC2 species:5476 "Candida albica... 348 1.8e-32 2
RGD|1307634 - symbol:Chaf1b "chromatin assembly factor 1,... 370 5.4e-32 2
ZFIN|ZDB-GENE-040426-1947 - symbol:chaf1b "chromatin asse... 376 5.8e-32 1
UNIPROTKB|Q13112 - symbol:CHAF1B "Chromatin assembly fact... 373 6.4e-32 1
MGI|MGI:1314881 - symbol:Chaf1b "chromatin assembly facto... 373 8.0e-32 1
UNIPROTKB|F1P2D7 - symbol:CHAF1B "Chromatin assembly fact... 299 2.7e-30 2
UNIPROTKB|Q5R1S9 - symbol:CHAF1B "Chromatin assembly fact... 299 3.4e-30 2
UNIPROTKB|F1SGX1 - symbol:CHAF1B "Uncharacterized protein... 313 4.3e-30 2
UNIPROTKB|A5D9H4 - symbol:CHAF1B "Chromatin assembly fact... 312 4.4e-30 2
POMBASE|SPAC26H5.03 - symbol:pcf2 "CAF assembly factor (C... 268 1.8e-28 2
WB|WBGene00019627 - symbol:K10D2.1 species:6239 "Caenorha... 336 1.5e-27 2
POMBASE|SPBC15D4.03 - symbol:slm9 "hira protein Slm9" spe... 174 2.7e-20 4
SGD|S000004570 - symbol:CAC2 "Subunit of chromatin assemb... 193 1.1e-17 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 226 1.9e-17 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 231 5.5e-16 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 232 5.6e-16 1
CGD|CAL0000387 - symbol:orf19.4295 species:5476 "Candida ... 221 2.5e-15 3
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 185 6.3e-15 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 218 9.5e-15 1
UNIPROTKB|Q5DFU0 - symbol:Q5DFU0 "Probable cytosolic iron... 188 1.3e-14 2
UNIPROTKB|H9L0T1 - symbol:CIAO1 "Uncharacterized protein"... 170 2.1e-14 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 223 2.1e-14 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 156 8.9e-14 3
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 174 1.1e-13 2
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 207 2.5e-13 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 169 2.9e-13 2
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 169 2.9e-13 2
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 193 3.4e-13 2
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 191 1.2e-12 3
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 190 1.3e-12 2
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 186 2.6e-12 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 166 2.6e-12 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 166 2.6e-12 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 201 2.9e-12 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 196 3.5e-12 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 186 3.6e-12 2
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 185 4.6e-12 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 139 6.6e-12 3
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 192 1.1e-11 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 192 1.1e-11 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 165 1.4e-11 2
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 189 1.5e-11 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 190 1.6e-11 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 179 1.7e-11 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 164 2.0e-11 2
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 181 2.2e-11 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 180 2.4e-11 2
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 187 2.7e-11 2
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 187 2.8e-11 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 175 2.8e-11 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 186 3.0e-11 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 186 3.5e-11 2
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 179 3.9e-11 2
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 176 3.9e-11 2
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 202 4.0e-11 2
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 187 4.0e-11 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 182 4.2e-11 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 183 4.4e-11 2
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 175 4.8e-11 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 184 5.1e-11 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 177 7.3e-11 2
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 177 7.3e-11 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 166 7.9e-11 3
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 184 8.4e-11 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 184 8.5e-11 1
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 184 8.5e-11 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 179 9.2e-11 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 148 9.4e-11 2
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 176 9.5e-11 2
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 180 9.5e-11 1
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 169 1.0e-10 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 194 1.0e-10 2
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 183 1.1e-10 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 181 1.1e-10 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 168 1.1e-10 2
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 175 1.2e-10 2
WARNING: Descriptions of 829 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q32SG6 [details] [associations]
symbol:Q32SG6 "Protein HIRA" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07569 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006351
GO:GO:0016568 KO:K11293 EMBL:AY940678 RefSeq:NP_001105835.1
UniGene:Zm.22931 ProteinModelPortal:Q32SG6 IntAct:Q32SG6
GeneID:732736 KEGG:zma:732736 Gramene:Q32SG6 Uniprot:Q32SG6
Length = 964
Score = 2445 (865.7 bits), Expect = 6.0e-254, P = 6.0e-254
Identities = 476/691 (68%), Positives = 549/691 (79%)
Query: 1 MIAEKPSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA 60
MI EKPSW+RHEG+QIFSID+Q G LRFATGGGD KVRIW+M+SV K+ N++S QRLLA
Sbjct: 1 MILEKPSWIRHEGLQIFSIDIQTGGLRFATGGGDQKVRIWSMESVHKDNTNNDSKQRLLA 60
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TLRDHFGSVNCVRWAKHGRY+ASGSDDQVILIHE+K GSGT+EFGSGEPPD ENWKV MT
Sbjct: 61 TLRDHFGSVNCVRWAKHGRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDAENWKVIMT 120
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
RGHTADVVDL+WSPDDS LASGSLDNTIHIWNM+ GICTAVLRGH+SLVKGV WDPIGS
Sbjct: 121 WRGHTADVVDLSWSPDDSTLASGSLDNTIHIWNMNNGICTAVLRGHTSLVKGVTWDPIGS 180
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR 240
FIASQSDDKTV+IWRTSDWSLAH+T+GHW KSLGSTFFRRL WSPC HFITTTHGFQKPR
Sbjct: 181 FIASQSDDKTVMIWRTSDWSLAHKTEGHWTKSLGSTFFRRLAWSPCCHFITTTHGFQKPR 240
Query: 241 HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGG 300
HSAPVLERGEWAATFDFLGHNAPI+VVKFN+S FR+N +S Q+ KAAPVGW NG SK
Sbjct: 241 HSAPVLERGEWAATFDFLGHNAPIVVVKFNNSTFRKNFSSDQDPKAAPVGWANGASKTPT 300
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT 360
KE QPYNVIAIGSQDRTITVWTTAS RPLFVA+HFF+QSVVDLSWSPDGYSLFACSLDG+
Sbjct: 301 KEQQPYNVIAIGSQDRTITVWTTASARPLFVARHFFSQSVVDLSWSPDGYSLFACSLDGS 360
Query: 361 VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV 420
ANFHFEVKELGHRLSD+E+DE KR+RYGDV GR +NLAE+PAQLLLE ASAK++ +KV
Sbjct: 361 AANFHFEVKELGHRLSDSEMDEWKRNRYGDVGGRQSNLAESPAQLLLEQASAKQSAGEKV 420
Query: 421 VSDVQAIQAPVKSSVNI---GVTTKTSE-PQT--DNGKKSGGVASDGLNKVSTSGRISSP 474
S V+ +AP K S + G+ + E P+ ++ KK+ G +D + K ++SSP
Sbjct: 421 TSIVEQGKAPPKVSAGVPNPGLVVLSLEVPEVSHEDSKKTAGPTADDVKK---GNQLSSP 477
Query: 475 VKQREYRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGV 534
VKQREYRRPDGRKRIIPEAVG Q+ + +Q+ +F S D R NG P+ G
Sbjct: 478 VKQREYRRPDGRKRIIPEAVGFASNQDNIPNHSQNHPVNFS--SLDQRM--NGTKPSYG- 532
Query: 535 MREVSVRGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGS 594
+ + VK+R+ VTARA ITESLVI+K A A DG + +E + ++ S
Sbjct: 533 ------SNSNSNNCGVKDRTSVTARANITESLVIQKASAGAGNDGRLSIEHTRSMAPSSL 586
Query: 595 VAATTTTLSIRVFDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACTRGSQT 654
+ LSI V +K ED +PVCLEARP E D++G+G+ KETEI C +G++T
Sbjct: 587 TPCSA--LSIHVINKNGNEDALPVCLEARPVERGAGDMIGVGALST-KETEIKCIKGTKT 643
Query: 655 LWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
LWSDRI+GKVTVLAGN NFWAVGCEDG LQV
Sbjct: 644 LWSDRISGKVTVLAGNANFWAVGCEDGFLQV 674
>RGD|1584950 [details] [associations]
symbol:Hira "HIR histone cell cycle regulation defective homolog
A (S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000790
"nuclear chromatin" evidence=ISO] [GO:0001649 "osteoblast
differentiation" evidence=ISO] [GO:0007369 "gastrulation"
evidence=ISO] [GO:0042692 "muscle cell differentiation"
evidence=ISO] REFSEQ:NM_001135760 Ncbi:NP_001129232
Length = 1015
Score = 807 (289.1 bits), Expect = 2.6e-87, Sum P(3) = 2.6e-87
Identities = 162/392 (41%), Positives = 233/392 (59%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLA 60
KP+WV H G IFS+D+ P +FATGG G KV IWNM V ++ E DE+ ++L
Sbjct: 5 KPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLC 64
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGS-GEPPDIENWKVA 118
+ +H VNCVRW+ G Y+ASG DD++I++ ++ G +T FGS G+ ++E W+
Sbjct: 65 QMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCV 124
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDP 177
LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGHS LVKG+ WDP
Sbjct: 125 SILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDP 184
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQ 237
+G +IASQ+DD+++ +WRT DW L + + G+T RL WSP GH++ + H
Sbjct: 185 VGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMN 244
Query: 238 KPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK 297
+A ++ER W DF+GH + VVKFN +F++ NG+S
Sbjct: 245 NSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSS- 290
Query: 298 IGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSL 357
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+
Sbjct: 291 --AKPSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSM 348
Query: 358 DGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
DG+VA F ELG LS+ E + +S YG
Sbjct: 349 DGSVAFLDFSQDELGDPLSEEEKSRIHQSTYG 380
Score = 51 (23.0 bits), Expect = 2.6e-87, Sum P(3) = 2.6e-87
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
N++ +G ++ + + C R + W ++ +V AG+ + V CE L V
Sbjct: 706 NEVTTVGG---IRLSRLKCNREGKE-WETVLSSRVLTAAGSCDVVCVACEKRMLSV 757
Score = 47 (21.6 bits), Expect = 2.6e-87, Sum P(3) = 2.6e-87
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 448 KQVETRTADGRRRITP 463
>MGI|MGI:99430 [details] [associations]
symbol:Hira "histone cell cycle regulation defective homolog A
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0001649 "osteoblast differentiation"
evidence=IGI] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0042692 "muscle cell differentiation" evidence=IGI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99430 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016605 eggNOG:COG2319
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0042692
GO:GO:0000790 GO:GO:0001649 GO:GO:0007369 KO:K11293
GeneTree:ENSGT00550000074919 CTD:7290 HOGENOM:HOG000007670
HOVERGEN:HBG005969 OMA:CVSILRN OrthoDB:EOG42NHZN EMBL:X92590
EMBL:X99712 EMBL:X75295 EMBL:AK135928 EMBL:AK168963 EMBL:BC052856
IPI:IPI00123694 IPI:IPI00227946 IPI:IPI00845600 IPI:IPI00845655
PIR:S45345 PIR:S68141 RefSeq:NP_034565.2 UniGene:Mm.15694
UniGene:Mm.453041 ProteinModelPortal:Q61666 SMR:Q61666
IntAct:Q61666 STRING:Q61666 PhosphoSite:Q61666 PRIDE:Q61666
DNASU:15260 Ensembl:ENSMUST00000004222 Ensembl:ENSMUST00000120532
GeneID:15260 KEGG:mmu:15260 UCSC:uc007yoq.1 UCSC:uc007yor.1
InParanoid:Q61666 NextBio:287885 Bgee:Q61666 Genevestigator:Q61666
GermOnline:ENSMUSG00000022702 Uniprot:Q61666
Length = 1015
Score = 806 (288.8 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 162/392 (41%), Positives = 233/392 (59%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLA 60
KP+WV H G IFS+D+ P +FATGG G KV IWNM V ++ E DE+ ++L
Sbjct: 5 KPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLC 64
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGS-GEPPDIENWKVA 118
+ +H VNCVRW+ G Y+ASG DD++I++ ++ G +T FGS G+ ++E W+
Sbjct: 65 QMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCV 124
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDP 177
LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGHS LVKG+ WDP
Sbjct: 125 SILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDP 184
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQ 237
+G +IASQ+DD+++ +WRT DW L + + G+T RL WSP GH++ + H
Sbjct: 185 VGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMN 244
Query: 238 KPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK 297
+A ++ER W DF+GH + VVKFN +F++ NG+S
Sbjct: 245 NSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSST 291
Query: 298 IGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSL 357
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+
Sbjct: 292 ---KPSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSM 348
Query: 358 DGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
DG+VA F ELG LS+ E + +S YG
Sbjct: 349 DGSVAFLDFSQDELGDPLSEEEKSRIHQSTYG 380
Score = 51 (23.0 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
N++ +G ++ + + C R + W ++ +V AG+ + V CE L V
Sbjct: 706 NEVTTVGG---IRLSRLKCNREGKE-WETVLSSRVLTAAGSCDVVCVACEKRMLSV 757
Score = 47 (21.6 bits), Expect = 3.2e-87, Sum P(3) = 3.2e-87
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 448 KQVETRTADGRRRITP 463
Score = 41 (19.5 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 399 AETPAQLLLEAASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEP 446
A P + A SA+ T + A P SS ++ T EP
Sbjct: 513 ASKPCTEPVAATSARPTGESVSKDSMNATSTPAASSPSVLTTPSKIEP 560
>UNIPROTKB|J9NS10 [details] [associations]
symbol:HIRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0016568 KO:K11293
GeneTree:ENSGT00550000074919 CTD:7290 OMA:CVSILRN EMBL:AAEX03014866
EMBL:AAEX03014867 EMBL:AAEX03014868 EMBL:AAEX03014869
RefSeq:XP_543550.2 ProteinModelPortal:J9NS10
Ensembl:ENSCAFT00000043980 GeneID:486424 KEGG:cfa:486424
Uniprot:J9NS10
Length = 1017
Score = 807 (289.1 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 162/392 (41%), Positives = 233/392 (59%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLA 60
KP+WV H G IFS+D+ P +FATGG G KV IWNM V ++ E DE+ ++L
Sbjct: 5 KPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLC 64
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGS-GEPPDIENWKVA 118
+ +H VNCVRW+ G Y+ASG DD++I++ ++ G +T FGS G+ ++E W+
Sbjct: 65 QMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCV 124
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDP 177
LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGHS LVKG+ WDP
Sbjct: 125 SILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDP 184
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQ 237
+G +IASQ+DD+++ +WRT DW L + + G+T RL WSP GH++ + H
Sbjct: 185 VGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMN 244
Query: 238 KPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK 297
+A ++ER W DF+GH + VVKFN +F++ NG+S
Sbjct: 245 NSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSS- 290
Query: 298 IGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSL 357
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+
Sbjct: 291 --AKPSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSM 348
Query: 358 DGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
DG+VA F ELG LS+ E + +S YG
Sbjct: 349 DGSVAFLDFSQDELGDPLSEEEKSRIHQSTYG 380
Score = 78 (32.5 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 59/275 (21%), Positives = 111/275 (40%)
Query: 430 PVKSSV--NIGVTTKTSEPQTDNGKKSGG--VASDGLNKVSTSGRISSPVKQREYRRPDG 485
P+ SS + G + ++EP G + G V+ D +N ST SSP + +
Sbjct: 503 PLDSSTPNSFGASKPSTEPVATTGARPAGDTVSKDSVNATSTPAA-SSPSVLTTPSKIEP 561
Query: 486 RKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSVRGTVG 545
K ++ T GA + L P + + K+ N +++E+ R +
Sbjct: 562 MKAFDSRFT----ERSKATPGAPA-LTSVTPTAMERLKEQN-------LVKELRPRDLLE 609
Query: 546 RSSDVKERSGVTARATITE---SLVIEKVPASAAG----DGNVGVEQSGNVKASGSVAAT 598
SSD E+ VT +++++ L +E V G D + + S +V++ ++ A
Sbjct: 610 SSSDSDEKVPVTKPSSLSKRKLELEVETVEKKKKGRPRKDSRL-MPVSLSVQSPAALTAE 668
Query: 599 --TTTLSIRVFDKK---EGEDNV-PVCLEARPREH--AVNDIVGMGSTCMMKETEIACTR 650
LS+ K G + + + P + N++ +G +K + + C R
Sbjct: 669 KDAVCLSVPAPALKLPMPGPQRAFTLQVSSDPSMYIEVENEVTAVGG---VKLSRLKCNR 725
Query: 651 GSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
+ W +T ++ AG+ + V CE L V
Sbjct: 726 EGKE-WETVLTSRILTAAGSCDVVCVACEKRMLSV 759
Score = 47 (21.6 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 448 KQVETRTADGRRRITP 463
>FB|FBgn0022786 [details] [associations]
symbol:Hira "Hira" species:7227 "Drosophila melanogaster"
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0035041 "sperm chromatin decondensation"
evidence=IMP] [GO:0001673 "male germ cell nucleus" evidence=IDA]
[GO:0035042 "fertilization, exchange of chromosomal proteins"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0003682 GO:GO:0001673
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006336 GO:GO:0035042
KO:K11293 GeneTree:ENSGT00550000074919 CTD:7290 EMBL:AF031081
EMBL:AJ222709 EMBL:AF071881 EMBL:AY069414 EMBL:BT016167 PIR:A59246
RefSeq:NP_572401.2 UniGene:Dm.2141 ProteinModelPortal:O17468
SMR:O17468 IntAct:O17468 STRING:O17468 PaxDb:O17468
EnsemblMetazoa:FBtr0071070 GeneID:31680 KEGG:dme:Dmel_CG12153
FlyBase:FBgn0022786 InParanoid:O17468 OMA:KECKSER OrthoDB:EOG40VT4J
PhylomeDB:O17468 ChiTaRS:HIRA GenomeRNAi:31680 NextBio:774799
Bgee:O17468 GermOnline:CG12153 Uniprot:O17468
Length = 1047
Score = 607 (218.7 bits), Expect = 1.2e-84, Sum P(4) = 1.2e-84
Identities = 119/278 (42%), Positives = 170/278 (61%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLA 60
KP+WV H+ QIFS+D+ +FATGG G +V IWN+ V E D ++L
Sbjct: 5 KPAWVHHDDKQIFSVDIHKDCTKFATGGQGSDCGRVVIWNLLPVLSDKAEFDADVPKMLC 64
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+ H VNCVRW+++G+ +ASGSDD++I+I K GS FG+G + E+WK
Sbjct: 65 QMDQHLACVNCVRWSQNGQNLASGSDDKLIMIWRKSAGSSGV-FGTGGMQKNHESWKCFY 123
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST-GICTAVLRGHSSLVKGVAWDPI 178
TLRGH DV+DL WSP+D LAS S+DNT+ IW+ A L+GH+ LVKGV+WDP+
Sbjct: 124 TLRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWDPL 183
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
G F+ASQSDD+++ IW T +WSL+H + + G+T RL WSP G ++ + H
Sbjct: 184 GRFLASQSDDRSIKIWNTMNWSLSHTITEPFEECGGTTHILRLSWSPDGQYLVSAHAMNG 243
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRR 276
+A ++ER W DF+GH + V+F++S+ R
Sbjct: 244 GGPTAQIIEREGWKCDKDFVGHRKAVTCVRFHNSILSR 281
Score = 213 (80.0 bits), Expect = 1.2e-84, Sum P(4) = 1.2e-84
Identities = 55/160 (34%), Positives = 88/160 (55%)
Query: 300 GKESQP--YNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSL 357
G S+P Y +A+GS+DR+++VW TA RP+ V F S++DL+W P L ACS+
Sbjct: 286 GSPSKPLQYCCLAVGSRDRSLSVWMTALQRPMVVIHELFNASILDLTWGPQECLLMACSV 345
Query: 358 DGTVANFHFEVKELGHRLSDAELDELKRSRYGD--VRG--RLANLAETPAQLLLEAASAK 413
DG++A F +ELG +S+ E + + R YG V G + A + E P +LLL
Sbjct: 346 DGSIACLKFTEEELGKAISEEEQNAIIRKMYGKNYVNGLGKSAPVLEHPQRLLLPQGD-- 403
Query: 414 ETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKK 453
+ T + ++ +A Q P+ +K +E +T +GK+
Sbjct: 404 KPTKFPLSNNNEANQRPI---------SKQTETRTKDGKR 434
Score = 69 (29.3 bits), Expect = 6.3e-63, Sum P(2) = 6.3e-63
Identities = 54/218 (24%), Positives = 81/218 (37%)
Query: 352 LFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAAS 411
L C LD T+ H E L ++ L E K R D+ A + A +
Sbjct: 845 LMQCVLD-TLKP-HSEWNRLHSEYTEL-LKECKSERQKDIFATPAPPQQKTASSAGSSPR 901
Query: 412 AKETTTKKVVSD--VQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSG 469
+ E T ++V A+ A V + + VTT TS T S ++S G + STSG
Sbjct: 902 SGEATGEEVTEKDGATAVAAAVVAGSRMAVTTGTSTTTTTTASSS--LSSSGSSS-STSG 958
Query: 470 RISSPVKQREYRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHR--KDNNG 527
SS ++ VP Q + + Q D P V D ++
Sbjct: 959 SGSSSSSSST------------SSLSVP--QPAPSLSPEIQTLDSPTVCIDDEILSASSS 1004
Query: 528 VVPADGVMREVSVRGTVGRSSDVKERSGVTARATITES 565
+ P D EVS T G ++ + V A ++ S
Sbjct: 1005 LPPLDTSPVEVSPASTSGGAASTSPAASVAGSAPVSSS 1042
Score = 58 (25.5 bits), Expect = 1.2e-84, Sum P(4) = 1.2e-84
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 474 PV-KQREYRRPDGRKRIIPEAVGVPVQQEGVT 504
P+ KQ E R DG++RI P + +P+ ++G T
Sbjct: 420 PISKQTETRTKDGKRRITP--MFIPLHEDGPT 449
Score = 42 (19.8 bits), Expect = 1.2e-84, Sum P(4) = 1.2e-84
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 519 SDHRKDNNGVVPADGVMREVSVRGTVGRSSD-----VKERSGVTA--RATITES--LVIE 569
S+ +KD PA + S G+ RS + V E+ G TA A + S V
Sbjct: 875 SERQKDIFAT-PAPPQQKTASSAGSSPRSGEATGEEVTEKDGATAVAAAVVAGSRMAVTT 933
Query: 570 KVPASAAGDGNVGVEQSGN---VKASGSVAATTTTLSIRV 606
+ + + SG+ SGS +++++T S+ V
Sbjct: 934 GTSTTTTTTASSSLSSSGSSSSTSGSGSSSSSSSTSSLSV 973
>UNIPROTKB|P54198 [details] [associations]
symbol:HIRA "Protein HIRA" species:9606 "Homo sapiens"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016605 eggNOG:COG2319 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0000790 GO:GO:0009653 GO:GO:0007369 Orphanet:567 PDB:2I32
PDBsum:2I32 KO:K11293 CTD:7290 HOGENOM:HOG000007670
HOVERGEN:HBG005969 ChiTaRS:HIRA EMBL:X81844 EMBL:X77633 EMBL:X89887
EMBL:X91501 EMBL:CR456503 EMBL:BC032721 EMBL:BC039835 EMBL:X75296
IPI:IPI00217560 IPI:IPI00218434 PIR:I37465 PIR:S45344
RefSeq:NP_003316.3 UniGene:Hs.474206 ProteinModelPortal:P54198
SMR:P54198 DIP:DIP-29240N IntAct:P54198 STRING:P54198
PhosphoSite:P54198 DMDM:88984228 PaxDb:P54198 PeptideAtlas:P54198
PRIDE:P54198 DNASU:7290 Ensembl:ENST00000263208
Ensembl:ENST00000340170 GeneID:7290 KEGG:hsa:7290 UCSC:uc002zpf.1
UCSC:uc010grn.1 GeneCards:GC22M019318 HGNC:HGNC:4916 HPA:CAB039243
MIM:600237 neXtProt:NX_P54198 PharmGKB:PA29293 InParanoid:P54198
OMA:CVSILRN OrthoDB:EOG42NHZN PhylomeDB:P54198
EvolutionaryTrace:P54198 GenomeRNAi:7290 NextBio:28503
ArrayExpress:P54198 Bgee:P54198 CleanEx:HS_HIRA
Genevestigator:P54198 GermOnline:ENSG00000100084 Uniprot:P54198
Length = 1017
Score = 807 (289.1 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 162/392 (41%), Positives = 233/392 (59%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLA 60
KP+WV H G IFS+D+ P +FATGG G KV IWNM V ++ E DE+ ++L
Sbjct: 5 KPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLC 64
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGS-GEPPDIENWKVA 118
+ +H VNCVRW+ G Y+ASG DD++I++ ++ G +T FGS G+ ++E W+
Sbjct: 65 QMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCV 124
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDP 177
LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGHS LVKG+ WDP
Sbjct: 125 SILRNHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDP 184
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQ 237
+G +IASQ+DD+++ +WRT DW L + + G+T RL WSP GH++ + H
Sbjct: 185 VGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMN 244
Query: 238 KPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK 297
+A ++ER W DF+GH + VVKFN +F++ NG+S
Sbjct: 245 NSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSS- 290
Query: 298 IGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSL 357
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+
Sbjct: 291 --AKPSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSM 348
Query: 358 DGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
DG+VA F ELG LS+ E + +S YG
Sbjct: 349 DGSVAFLDFSQDELGDPLSEEEKSRIHQSTYG 380
Score = 57 (25.1 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 54/276 (19%), Positives = 108/276 (39%)
Query: 430 PVKSSV--NIGVTTKTSEPQTDNGKKSGG--VASDGLNKVSTSGRISSPVKQREYRRPDG 485
P+ SS + G + +EP + G V D +N ST +S V P
Sbjct: 503 PLDSSTPNSFGASKPCTEPVVAASARPAGDSVNKDSMNATSTPAALSPSV----LTTPS- 557
Query: 486 RKRIIP-EAVGVP-VQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSVRGT 543
+I P +A ++ T GA + L P + + K+ N +++E+ R
Sbjct: 558 --KIEPMKAFDSRFTERSKATPGAPA-LTSMTPTAVERLKEQN-------LVKELRPRDL 607
Query: 544 VGRSSDVKERSGVTARATITE---SLVIEKVPASAAG----DG-----NVGVEQSGNVKA 591
+ SSD E+ + +++++ L +E V G D ++ V+ + A
Sbjct: 608 LESSSDSDEKVPLAKASSLSKRKLELEVETVEKKKKGRPRKDSRLMPVSLSVQSPAALTA 667
Query: 592 SG-SVAATTTTLSIRV-FDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACT 649
++ + L++++ + + V + N++ +G +K + + C
Sbjct: 668 EKEAMCLSAPALALKLPIPSPQRAFTLQVSSDPSMYIEVENEVTVVGG---VKLSRLKCN 724
Query: 650 RGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
R + W +T ++ AG+ + V CE L V
Sbjct: 725 REGKE-WETVLTSRILTAAGSCDVVCVACEKRMLSV 759
Score = 47 (21.6 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 448 KQVETRTADGRRRITP 463
>UNIPROTKB|P79987 [details] [associations]
symbol:HIRA "Protein HIRA" species:9031 "Gallus gallus"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 KO:K11293 EMBL:X99375 EMBL:AB091180
IPI:IPI00579222 RefSeq:NP_989563.1 UniGene:Gga.2250
ProteinModelPortal:P79987 IntAct:P79987 STRING:P79987 GeneID:374074
KEGG:gga:374074 CTD:7290 HOGENOM:HOG000007670 HOVERGEN:HBG005969
InParanoid:P79987 NextBio:20813595 Uniprot:P79987
Length = 1019
Score = 796 (285.3 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 160/392 (40%), Positives = 231/392 (58%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSVGKNF-ENDESTQRLLA 60
KP+WV H G IFS+D+ P +FATGG G KV IWNM V K E +E+ ++L
Sbjct: 5 KPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMAPVLKEEDEKNENIPKMLC 64
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGSGEP-PDIENWKVA 118
+ +H VNCVRW+ +G Y+ASG DD++I++ ++ G +T FGS ++E W+
Sbjct: 65 QMDNHLACVNCVRWSNNGVYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLTNVEQWRCV 124
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDP 177
LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A L+GHS LVKG+ WDP
Sbjct: 125 SILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGLTWDP 184
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQ 237
+G +IASQ+DD+++ +WRT DW L + + G+T RL WSP GH++ + H
Sbjct: 185 VGKYIASQADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMN 244
Query: 238 KPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK 297
+A ++ER W DF+GH + VVKFN +F++ NG+S
Sbjct: 245 NSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSST 291
Query: 298 IGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSL 357
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+
Sbjct: 292 ---KSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSM 348
Query: 358 DGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
DG+VA F ELG LS+ E + +S YG
Sbjct: 349 DGSVAFLDFSQDELGDPLSEEEKSNIHQSTYG 380
Score = 219 (82.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 87/313 (27%), Positives = 137/313 (43%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT 360
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+
Sbjct: 292 KSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGS 351
Query: 361 VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV 420
VA F ELG LS+ E + +S YG LA + E AQL E K
Sbjct: 352 VAFLDFSQDELGDPLSEEEKSNIHQSTYGK---SLAIMTE--AQLSTTIIENPEML--KY 404
Query: 421 VSDVQAIQAPVKS-SVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQRE 479
Q QA K+ S+ T+ P K + V + L + R + KQ E
Sbjct: 405 QQRQQQQQAEQKNASIREASGAATTAP-----KVASMVNGESLEDI----RKNLLKKQVE 455
Query: 480 YRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVS 539
R DGR+RI P + Q + TG + + P+S ++ + + +S
Sbjct: 456 TRTADGRRRITPLCIA---QLD--TGDFSTAFFNSIPISGTLA---GSIMSSQNNQQLMS 507
Query: 540 VRGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDG-NVGVEQSGNVKASGSVAAT 598
+ S + + S A+I + +A+ DG N + +S SV T
Sbjct: 508 LDSNAANSLNTSKPSAEPTAASI------KPTDDAASKDGVNATSVSTAPPASSSSVLTT 561
Query: 599 TTTLS-IRVFDKK 610
+ + ++ FD +
Sbjct: 562 PSKIEPMKAFDSR 574
Score = 55 (24.4 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
N++ +G + K + + C R + W +T ++ AG+ V CE L V
Sbjct: 714 NEMTTVGGS---KLSRLKCNREGKE-WETVLTSRILTAAGSCEIVCVACEKRMLSV 765
>ZFIN|ZDB-GENE-030131-6296 [details] [associations]
symbol:hira "HIR histone cell cycle regulation
defective homolog A (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6296
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003682
GO:GO:0016568 KO:K11293 GeneTree:ENSGT00550000074919 CTD:7290
HOGENOM:HOG000007670 HOVERGEN:HBG005969 OMA:CVSILRN
OrthoDB:EOG42NHZN EMBL:CR774200 IPI:IPI00491788 RefSeq:XP_696478.2
UniGene:Dr.77722 Ensembl:ENSDART00000132164 GeneID:568076
KEGG:dre:568076 InParanoid:A2CEX6 NextBio:20888993 Uniprot:A2CEX6
Length = 1010
Score = 778 (278.9 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 157/392 (40%), Positives = 230/392 (58%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLA 60
KPSWV H G IFS+D+ P +FATGG G+ KV IWNM V + E +E+ +LL
Sbjct: 5 KPSWVNHNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNENIPKLLC 64
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGSGEP-PDIENWKVA 118
+ +H VNCVRW+ +G Y+ASG DD+++++ ++ G +T FGS ++E W+
Sbjct: 65 QMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQWRCV 124
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST-GICTAVLRGHSSLVKGVAWDP 177
LR HT DV+D+ WSP D LAS S+DNTI IWN L+GH+ LVKG+ WDP
Sbjct: 125 TILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEIVMTLKGHTGLVKGLTWDP 184
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQ 237
+G +IASQ+DD ++ +WRT DW L +++ G+T RL WSP G ++ + H
Sbjct: 185 VGKYIASQADDHSLKVWRTMDWQLETNITKPFSECGGTTHVLRLSWSPDGQYLVSAHAMN 244
Query: 238 KPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK 297
+A ++ER W DF+GH + VVKFN +F++ NG++
Sbjct: 245 NSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSTP 291
Query: 298 IGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSL 357
K S PY A+GS+DR+++VW T+ RPL V F +S++D++W+ +G L CS+
Sbjct: 292 ---KPSCPYCCCAVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDITWTLNGLGLLVCSM 348
Query: 358 DGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
DGTVA F ELG L++ E + + ++ YG
Sbjct: 349 DGTVAFLDFSQDELGDPLNEEEKNAIHQNIYG 380
Score = 72 (30.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 66/290 (22%), Positives = 115/290 (39%)
Query: 406 LLEAASAKETTTKKVVSDVQAIQA-PVKSSVNIGVTT--KTSEPQTDNGKKSGGVASDGL 462
+L +SA T ++ SD + ++ S + T+ KT+E D+ + V S G+
Sbjct: 484 ILPGSSASTQLTPQISSDSNTANSLGLRPSHDPSTTSPNKTAEENKDSA--TAPVNSIGM 541
Query: 463 NK--VSTSGRISSPVKQREYRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSD 520
+ TS P+K + R + R + P VP+ G+T + D V
Sbjct: 542 KSTLLLTSASKIEPMKALDSRFTE-RSKATPGVTSVPITI-GIT--PLDRAKDSSSVKEP 597
Query: 521 HRKDNNGVVPADGVMRE-VSV---RGTVGRSSDVKERSGVTARATITESLVIEKVPASAA 576
KD D +M + +S+ +G + V++R R + I + P
Sbjct: 598 KGKDETSSDSEDKIMNKTLSMAKRKGEIEGGEVVEKRKKGRPRKDAKMMMPISQ-PFPQT 656
Query: 577 GDGNVGVEQSGNVKASGSVAATTTTLSI-RVFDKKEGEDNVPVCLEARPREHAVNDIVGM 635
V V++ A+ +V T SI + F + G D V LE E+ V+ + G
Sbjct: 657 P---VSVKEELPRLATPAVVLKLPTPSIQKSFSTQVGTDAVTY-LEV---ENEVSVVSGA 709
Query: 636 GSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
+ + E G + W + ++ + G+ + AV CED L V
Sbjct: 710 RLSQLKWRRE-----GRE--WDTLLPSRIIIATGSSDVVAVACEDRTLSV 752
Score = 54 (24.1 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 35/152 (23%), Positives = 59/152 (38%)
Query: 476 KQREYRRPDGRKRIIPEAVGV-------PVQQEGVT--GGAQSQLHDFPPVSSDHRKDNN 526
KQ E R DGR+RI P + P V G+ + P +SSD N+
Sbjct: 448 KQVETRTADGRRRITPLCIAQLDTGDFSPALFNSVPILPGSSASTQLTPQISSDSNTANS 507
Query: 527 -GVVPA-DGVMREVSVRGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDGNVGVE 584
G+ P+ D + + S + + ++T+ + K+ A D E
Sbjct: 508 LGLRPSHDPSTTSPNKTAEENKDSATAPVNSIGMKSTLLLTSA-SKIEPMKALDSRF-TE 565
Query: 585 QSGNVKASGSVAATTTTLSIRVFDKKEGEDNV 616
+S KA+ V + T+ I D+ + +V
Sbjct: 566 RS---KATPGVTSVPITIGITPLDRAKDSSSV 594
Score = 37 (18.1 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 359 GTVANFHFEVKELGHRLSDAELDELKRSRYG 389
GT A + EV+ +S A L +LK R G
Sbjct: 690 GTDAVTYLEVENEVSVVSGARLSQLKWRREG 720
>UNIPROTKB|F1P8Q1 [details] [associations]
symbol:HIRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682
GO:GO:0016568 GO:GO:0000790 GO:GO:0007369
GeneTree:ENSGT00550000074919 EMBL:AAEX03014866 EMBL:AAEX03014867
EMBL:AAEX03014868 EMBL:AAEX03014869 Ensembl:ENSCAFT00000023274
Uniprot:F1P8Q1
Length = 1017
Score = 771 (276.5 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 157/384 (40%), Positives = 227/384 (59%)
Query: 13 GMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLATLRDHFGS 68
G IFS+D+ P +FATGG G KV IWNM V ++ E DE+ ++L + +H
Sbjct: 13 GKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIPKMLCQMDNHLAC 72
Query: 69 VNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGS-GEPPDIENWKVAMTLRGHTA 126
VNCVRW+ G Y+ASG DD++I++ ++ G +T FGS G+ ++E W+ LR H+
Sbjct: 73 VNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCVSILRSHSG 132
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGHS LVKG+ WDP+G +IASQ
Sbjct: 133 DVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDPVGKYIASQ 192
Query: 186 SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
+DD+++ +WRT DW L + + G+T RL WSP GH++ + H +A +
Sbjct: 193 ADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQI 252
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQP 305
+ER W DF+GH + VVKFN +F++ NG+S K S P
Sbjct: 253 IEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSS---AKPSCP 296
Query: 306 YNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
Y A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+VA
Sbjct: 297 YCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLD 356
Query: 366 FEVKELGHRLSDAELDELKRSRYG 389
F ELG LS+ E + +S YG
Sbjct: 357 FSQDELGDPLSEEEKSRIHQSTYG 380
Score = 78 (32.5 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 59/275 (21%), Positives = 111/275 (40%)
Query: 430 PVKSSV--NIGVTTKTSEPQTDNGKKSGG--VASDGLNKVSTSGRISSPVKQREYRRPDG 485
P+ SS + G + ++EP G + G V+ D +N ST SSP + +
Sbjct: 503 PLDSSTPNSFGASKPSTEPVATTGARPAGDTVSKDSVNATSTPAA-SSPSVLTTPSKIEP 561
Query: 486 RKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSVRGTVG 545
K ++ T GA + L P + + K+ N +++E+ R +
Sbjct: 562 MKAFDSRFT----ERSKATPGAPA-LTSVTPTAMERLKEQN-------LVKELRPRDLLE 609
Query: 546 RSSDVKERSGVTARATITE---SLVIEKVPASAAG----DGNVGVEQSGNVKASGSVAAT 598
SSD E+ VT +++++ L +E V G D + + S +V++ ++ A
Sbjct: 610 SSSDSDEKVPVTKPSSLSKRKLELEVETVEKKKKGRPRKDSRL-MPVSLSVQSPAALTAE 668
Query: 599 --TTTLSIRVFDKK---EGEDNV-PVCLEARPREH--AVNDIVGMGSTCMMKETEIACTR 650
LS+ K G + + + P + N++ +G +K + + C R
Sbjct: 669 KDAVCLSVPAPALKLPMPGPQRAFTLQVSSDPSMYIEVENEVTAVGG---VKLSRLKCNR 725
Query: 651 GSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
+ W +T ++ AG+ + V CE L V
Sbjct: 726 EGKE-WETVLTSRILTAAGSCDVVCVACEKRMLSV 759
Score = 47 (21.6 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 448 KQVETRTADGRRRITP 463
>UNIPROTKB|F1RK64 [details] [associations]
symbol:HIRA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042692 "muscle cell differentiation" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0016568 GO:GO:0000790
GO:GO:0007369 GeneTree:ENSGT00550000074919 EMBL:CU618331
Ensembl:ENSSSCT00000011079 OMA:LDNTVHI Uniprot:F1RK64
Length = 1016
Score = 767 (275.1 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 155/384 (40%), Positives = 224/384 (58%)
Query: 13 GMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLATLRDHFGS 68
G IFS+D+ P +FATGG G KV IWNM V ++ E DE+ ++L + +H
Sbjct: 13 GKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENVPKMLCQMDNHLAC 72
Query: 69 VNCVRWAKHGRYIASGSDDQVILIHEKKP--GSGTTEFGSGEPPDIENWKVAMTLRGHTA 126
VNCVRW+ G Y+ASG DD++I++ ++ G T SG+ ++E W+ LR H+
Sbjct: 73 VNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFSSSGKLANVEQWRCVSILRSHSG 132
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGHS LVKG+ WDP+G +IASQ
Sbjct: 133 DVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDPVGKYIASQ 192
Query: 186 SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
+DD+++ +WRT DW L + + G+T RL WSP GH++ + H +A +
Sbjct: 193 ADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQI 252
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQP 305
+ER W DF+GH + VVKFN +F++ NG+S K S P
Sbjct: 253 IEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSS---AKPSCP 296
Query: 306 YNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
Y A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+VA
Sbjct: 297 YCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLD 356
Query: 366 FEVKELGHRLSDAELDELKRSRYG 389
F ELG LS+ E + +S YG
Sbjct: 357 FSQDELGDPLSEEEKSRIHQSTYG 380
Score = 72 (30.4 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 54/272 (19%), Positives = 106/272 (38%)
Query: 430 PVKSSVNIGVTTKTSEPQTDNGKKSG-GVASDGLNKVSTSGRISSPVKQREYRRPDGRKR 488
P+ SS TK S + + +G V+ D +N ST SSP + + K
Sbjct: 503 PLDSSTPASFGTKPSTESVASARPAGDSVSKDSVNATSTPAA-SSPSVLTTPSKIEPMKA 561
Query: 489 IIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSVRGTVGRSS 548
++ T GA + L P + + K+ + +++E+ R + SS
Sbjct: 562 FDSRFT----ERSKATPGAPA-LASLTPTAVERLKEQS-------LVKELRPRDVLESSS 609
Query: 549 DVKERSGVTARATITE---SLVIEKVPASAAG----DGNVGVEQSGNVKASGSVAATTTT 601
D E+ V +++++ L +E V G D + + S ++++ ++ A
Sbjct: 610 DSDEKVPVAKPSSLSKRKLDLEVETVEKKKKGRPRKDSRL-MPMSLSMQSPAALTAEKDA 668
Query: 602 LSIRV--------FDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACTRGSQ 653
+ + V + + V + N++ +G T K + + C+R +
Sbjct: 669 MCLSVPAPALKLPMPGPQRAFTLQVSSDPSMYIEVENEVTTVGGT---KLSRLKCSREGK 725
Query: 654 TLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
W +TG++ AG+ + V CE L V
Sbjct: 726 E-WETVLTGRILTAAGSCDVVCVACEKRLLSV 756
Score = 48 (22.0 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQVSK 687
N++ +G T K + + C+R + W +TG++ AG+ + V CE K
Sbjct: 705 NEVTTVGGT---KLSRLKCSREGKE-WETVLTGRILTAAGSCDVVCVACE-------K 751
Score = 47 (21.6 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 448 KQVETRTADGRRRITP 463
Score = 40 (19.1 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 389 GDVRGRLANLAETPAQLLLEAAS----AKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTS 444
G + G + +P L L++++ + +T+ V S A + K SVN T S
Sbjct: 486 GSLAGTVLTSHSSPQLLPLDSSTPASFGTKPSTESVASARPAGDSVSKDSVNATSTPAAS 545
Query: 445 EP 446
P
Sbjct: 546 SP 547
>UNIPROTKB|F1N3C8 [details] [associations]
symbol:Bt.53751 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042692 "muscle cell differentiation" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0016568 GO:GO:0000790
GO:GO:0007369 GeneTree:ENSGT00550000074919 OMA:CVSILRN
EMBL:DAAA02045759 IPI:IPI00690471 Ensembl:ENSBTAT00000026497
Uniprot:F1N3C8
Length = 1017
Score = 771 (276.5 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 157/384 (40%), Positives = 227/384 (59%)
Query: 13 GMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSV-GKNFENDESTQRLLATLRDHFGS 68
G IFS+D+ P +FATGG G KV IWNM V ++ E DE+ ++L + +H
Sbjct: 10 GKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENVPKMLCQMDNHLAC 69
Query: 69 VNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGSG-EPPDIENWKVAMTLRGHTA 126
VNCVRW+ G Y+ASG DD++I++ ++ G +T FGSG + ++E W+ LR H+
Sbjct: 70 VNCVRWSNGGMYLASGGDDKLIMVWKRATYIGPSTVFGSGGKLANVEQWRCVSILRSHSG 129
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGHS LVKG+ WDP+G +IASQ
Sbjct: 130 DVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGLTWDPVGKYIASQ 189
Query: 186 SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
+DD+++ +WRT DW L + + G+T RL WSP GH++ + H +A +
Sbjct: 190 ADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQI 249
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQP 305
+ER W DF+GH + VVKFN +F++ NG+S K S P
Sbjct: 250 IEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSS---AKPSCP 293
Query: 306 YNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
Y A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+VA
Sbjct: 294 YCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLD 353
Query: 366 FEVKELGHRLSDAELDELKRSRYG 389
F ELG LS+ E + +S YG
Sbjct: 354 FSQDELGDPLSEEEKSRIHQSTYG 377
Score = 214 (80.4 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 67/195 (34%), Positives = 93/195 (47%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT 360
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+
Sbjct: 289 KPSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGS 348
Query: 361 VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV 420
VA F ELG LS+ E + +S YG LA + E AQL E
Sbjct: 349 VAFLDFSQDELGDPLSEEEKSRIHQSTYGK---SLAIMTE--AQLSTAVIENPE------ 397
Query: 421 VSDVQAIQAPVKSSVNIGVTTKTSEPQT-DNGKKS---GGVASDGLNKVSTSGRISSPVK 476
+ Q Q + G T + + P D G S G V + L + R + K
Sbjct: 398 MLQYQRRQQQLDRQ---GPTARDAGPAARDTGSASSVAGVVNGESLEDI----RKNLLKK 450
Query: 477 QREYRRPDGRKRIIP 491
Q E R DGR+RI P
Sbjct: 451 QVETRTADGRRRITP 465
Score = 54 (24.1 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
N++ G +K + + C+R + W + G++ AG+ + V CE L V
Sbjct: 708 NEVTAGGG---LKLSRLKCSREGKE-WETVLPGRILTAAGSGDVVCVACEKRMLSV 759
>UNIPROTKB|F1P261 [details] [associations]
symbol:HIRA "Protein HIRA" species:9031 "Gallus gallus"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682
GO:GO:0016568 GO:GO:0000790 GeneTree:ENSGT00550000074919
IPI:IPI00579222 OMA:CVSILRN EMBL:AADN02034775 EMBL:AADN02034774
Ensembl:ENSGALT00000039958 ArrayExpress:F1P261 Uniprot:F1P261
Length = 1023
Score = 769 (275.8 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 157/391 (40%), Positives = 227/391 (58%)
Query: 6 PSWVRHEGMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSVGKNF-ENDESTQRLLAT 61
P W G IFS+D+ P +FATGG G KV IWNM V K E +E+ ++L
Sbjct: 6 PCWCNCCGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMAPVLKEEDEKNENIPKMLCQ 65
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGSGEP-PDIENWKVAM 119
+ +H VNCVRW+ +G Y+ASG DD++I++ ++ G +T FGS ++E W+
Sbjct: 66 MDNHLACVNCVRWSNNGVYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLTNVEQWRCVS 125
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDPI 178
LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A L+GHS LVKG+ WDP+
Sbjct: 126 ILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGLTWDPV 185
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
G +IASQ+DD+++ +WRT DW L + + G+T RL WSP GH++ + H
Sbjct: 186 GKYIASQADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNN 245
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKI 298
+A ++ER W DF+GH + VVKFN +F++ NG+S
Sbjct: 246 SGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSST- 291
Query: 299 GGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLD 358
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+D
Sbjct: 292 --KSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMD 349
Query: 359 GTVANFHFEVKELGHRLSDAELDELKRSRYG 389
G+VA F ELG LS+ E + +S YG
Sbjct: 350 GSVAFLDFSQDELGDPLSEEEKSNIHQSTYG 380
Score = 219 (82.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 87/313 (27%), Positives = 137/313 (43%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT 360
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+
Sbjct: 292 KSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGS 351
Query: 361 VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV 420
VA F ELG LS+ E + +S YG LA + E AQL E K
Sbjct: 352 VAFLDFSQDELGDPLSEEEKSNIHQSTYGK---SLAIMTE--AQLSTTIIENPEML--KY 404
Query: 421 VSDVQAIQAPVKS-SVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQRE 479
Q QA K+ S+ T+ P K + V + L + R + KQ E
Sbjct: 405 QQRQQQQQAEQKNASIREASGAATTAP-----KVASMVNGESLEDI----RKNLLKKQVE 455
Query: 480 YRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVS 539
R DGR+RI P + Q + TG + + P+S ++ + + +S
Sbjct: 456 TRTADGRRRITPLCIA---QLD--TGDFSTAFFNSIPISGTLA---GSIMSSQNNQQLMS 507
Query: 540 VRGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDG-NVGVEQSGNVKASGSVAAT 598
+ S + + S A+I + +A+ DG N + +S SV T
Sbjct: 508 LDSNAANSLNTSKPSAEPTAASI------KPTDDAASKDGVNATSVSTAPPASSSSVLTT 561
Query: 599 TTTLS-IRVFDKK 610
+ + ++ FD +
Sbjct: 562 PSKIEPMKAFDSR 574
Score = 55 (24.4 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
N++ +G + K + + C R + W +T ++ AG+ V CE L V
Sbjct: 714 NEMTTVGGS---KLSRLKCNREGKE-WETVLTSRILTAAGSCEIVCVACEKRMLSV 765
>UNIPROTKB|F1NNS3 [details] [associations]
symbol:HIRA "Protein HIRA" species:9031 "Gallus gallus"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682
GO:GO:0016568 GO:GO:0000790 GeneTree:ENSGT00550000074919
EMBL:AADN02034775 EMBL:AADN02034774 IPI:IPI01017256
Ensembl:ENSGALT00000002395 ArrayExpress:F1NNS3 Uniprot:F1NNS3
Length = 1008
Score = 760 (272.6 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 155/384 (40%), Positives = 225/384 (58%)
Query: 13 GMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSVGKNF-ENDESTQRLLATLRDHFGS 68
G IFS+D+ P +FATGG G KV IWNM V K E +E+ ++L + +H
Sbjct: 1 GKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMAPVLKEEDEKNENIPKMLCQMDNHLAC 60
Query: 69 VNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGSGEP-PDIENWKVAMTLRGHTA 126
VNCVRW+ +G Y+ASG DD++I++ ++ G +T FGS ++E W+ LR H+
Sbjct: 61 VNCVRWSNNGVYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLTNVEQWRCVSILRSHSG 120
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
DV+D+ WSP D+ LAS S+DNT+ IWN + A L+GHS LVKG+ WDP+G +IASQ
Sbjct: 121 DVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGLTWDPVGKYIASQ 180
Query: 186 SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
+DD+++ +WRT DW L + + G+T RL WSP GH++ + H +A +
Sbjct: 181 ADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQI 240
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQP 305
+ER W DF+GH + VVKFN +F++ NG+S K S P
Sbjct: 241 IERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSST---KSSCP 284
Query: 306 YNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
Y A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+VA
Sbjct: 285 YCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLD 344
Query: 366 FEVKELGHRLSDAELDELKRSRYG 389
F ELG LS+ E + +S YG
Sbjct: 345 FSQDELGDPLSEEEKSNIHQSTYG 368
Score = 219 (82.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 87/313 (27%), Positives = 137/313 (43%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT 360
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+
Sbjct: 280 KSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGS 339
Query: 361 VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV 420
VA F ELG LS+ E + +S YG LA + E AQL E K
Sbjct: 340 VAFLDFSQDELGDPLSEEEKSNIHQSTYGK---SLAIMTE--AQLSTTIIENPEML--KY 392
Query: 421 VSDVQAIQAPVKS-SVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQRE 479
Q QA K+ S+ T+ P K + V + L + R + KQ E
Sbjct: 393 QQRQQQQQAEQKNASIREASGAATTAP-----KVASMVNGESLEDI----RKNLLKKQVE 443
Query: 480 YRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVS 539
R DGR+RI P + Q + TG + + P+S ++ + + +S
Sbjct: 444 TRTADGRRRITPLCIA---QLD--TGDFSTAFFNSIPISGTLA---GSIMSSQNNQQLMS 495
Query: 540 VRGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDG-NVGVEQSGNVKASGSVAAT 598
+ S + + S A+I + +A+ DG N + +S SV T
Sbjct: 496 LDSNAANSLNTSKPSAEPTAASI------KPTDDAASKDGVNATSVSTAPPASSSSVLTT 549
Query: 599 TTTLS-IRVFDKK 610
+ + ++ FD +
Sbjct: 550 PSKIEPMKAFDSR 562
Score = 55 (24.4 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
N++ +G + K + + C R + W +T ++ AG+ V CE L V
Sbjct: 702 NEMTTVGGS---KLSRLKCNREGKE-WETVLTSRILTAAGSCEIVCVACEKRMLSV 753
>UNIPROTKB|F1P259 [details] [associations]
symbol:HIRA "Protein HIRA" species:9031 "Gallus gallus"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0016568
GeneTree:ENSGT00550000074919 EMBL:AADN02034775 EMBL:AADN02034774
IPI:IPI00821794 Ensembl:ENSGALT00000039961 ArrayExpress:F1P259
Uniprot:F1P259
Length = 1012
Score = 760 (272.6 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 155/384 (40%), Positives = 225/384 (58%)
Query: 13 GMQIFSIDVQPGALRFATGG-GDH--KVRIWNMKSVGKNF-ENDESTQRLLATLRDHFGS 68
G IFS+D+ P +FATGG G KV IWNM V K E +E+ ++L + +H
Sbjct: 2 GKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMAPVLKEEDEKNENIPKMLCQMDNHLAC 61
Query: 69 VNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGSGEP-PDIENWKVAMTLRGHTA 126
VNCVRW+ +G Y+ASG DD++I++ ++ G +T FGS ++E W+ LR H+
Sbjct: 62 VNCVRWSNNGVYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLTNVEQWRCVSILRSHSG 121
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
DV+D+ WSP D+ LAS S+DNT+ IWN + A L+GHS LVKG+ WDP+G +IASQ
Sbjct: 122 DVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGLTWDPVGKYIASQ 181
Query: 186 SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
+DD+++ +WRT DW L + + G+T RL WSP GH++ + H +A +
Sbjct: 182 ADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQI 241
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQP 305
+ER W DF+GH + VVKFN +F++ NG+S K S P
Sbjct: 242 IERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK-------------NGSST---KSSCP 285
Query: 306 YNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
Y A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+VA
Sbjct: 286 YCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLD 345
Query: 366 FEVKELGHRLSDAELDELKRSRYG 389
F ELG LS+ E + +S YG
Sbjct: 346 FSQDELGDPLSEEEKSNIHQSTYG 369
Score = 219 (82.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 87/313 (27%), Positives = 137/313 (43%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT 360
K S PY A+GS+DR+++VW T RPL V F +S++D+SW+ +G + CS+DG+
Sbjct: 281 KSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGS 340
Query: 361 VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV 420
VA F ELG LS+ E + +S YG LA + E AQL E K
Sbjct: 341 VAFLDFSQDELGDPLSEEEKSNIHQSTYGK---SLAIMTE--AQLSTTIIENPEML--KY 393
Query: 421 VSDVQAIQAPVKS-SVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQRE 479
Q QA K+ S+ T+ P K + V + L + R + KQ E
Sbjct: 394 QQRQQQQQAEQKNASIREASGAATTAP-----KVASMVNGESLEDI----RKNLLKKQVE 444
Query: 480 YRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVS 539
R DGR+RI P + Q + TG + + P+S ++ + + +S
Sbjct: 445 TRTADGRRRITPLCIA---QLD--TGDFSTAFFNSIPISGTLA---GSIMSSQNNQQLMS 496
Query: 540 VRGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDG-NVGVEQSGNVKASGSVAAT 598
+ S + + S A+I + +A+ DG N + +S SV T
Sbjct: 497 LDSNAANSLNTSKPSAEPTAASI------KPTDDAASKDGVNATSVSTAPPASSSSVLTT 550
Query: 599 TTTLS-IRVFDKK 610
+ + ++ FD +
Sbjct: 551 PSKIEPMKAFDSR 563
Score = 55 (24.4 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 630 NDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
N++ +G + K + + C R + W +T ++ AG+ V CE L V
Sbjct: 703 NEMTTVGGS---KLSRLKCNREGKE-WETVLTSRILTAAGSCEIVCVACEKRMLSV 754
>POMBASE|SPBC31F10.13c [details] [associations]
symbol:hip1 "hira protein, histone chaperone Hip1"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000417 "HIR
complex" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=TAS]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0007070 "negative regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC31F10.13c GO:GO:0005829 GO:GO:0007346 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 GO:GO:0006351
GenomeReviews:CU329671_GR GO:GO:0003682 GO:GO:0016568 GO:GO:0030466
GO:GO:0000790 GO:GO:0030702 GO:GO:0000070 GO:GO:0006995
GO:GO:0006336 GO:GO:0007070 HOGENOM:HOG000208205 KO:K11293
OrthoDB:EOG4QRMC9 EMBL:AB027992 PIR:T40216 RefSeq:NP_596575.1
ProteinModelPortal:P87314 IntAct:P87314 STRING:P87314
EnsemblFungi:SPBC31F10.13c.1 GeneID:2540219 KEGG:spo:SPBC31F10.13c
OMA:CWIQAIT NextBio:20801351 GO:GO:0000417 Uniprot:P87314
Length = 932
Score = 528 (190.9 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 110/286 (38%), Positives = 163/286 (56%)
Query: 1 MIAEKPSWVRH---EG--MQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDEST 55
M +K W+ H G + IFSI + P R ATGG D +RIW+ +++ + EN+
Sbjct: 1 MKIKKIPWLGHFDDRGHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRENENENEN 60
Query: 56 QRL---LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKK---PGSGTTEFGSGEP 109
+ L L + H G+V VR++ +G+Y+ASGSDD+V++I K+ PG G+T FGSGE
Sbjct: 61 EDLPKQLCCMSTHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEAIPGLGST-FGSGEK 119
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
ENW+ L GH D+ DL WS D ++ S LD++I +WN +T + H S
Sbjct: 120 -HTENWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSH 178
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHF 229
VKG+ +DP G + A++SDD+T+ +WR SD+S+ G + S ST+FRR WSP G
Sbjct: 179 VKGITFDPAGKYFATESDDRTIKVWRVSDFSIEKTITGPFNNSPLSTYFRRPSWSPDGKH 238
Query: 230 ITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFR 275
I + P ++ERG W + + +GH P+ V FN +FR
Sbjct: 239 IAAPNAMNGPVSCVSIIERGTWTSEINLIGHEGPVEVTAFNPKLFR 284
Score = 210 (79.0 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 47/127 (37%), Positives = 70/127 (55%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
++A G QDR++++W++A PRPL ++ F +S+ D+ WSPDG SLF CS DG V FE
Sbjct: 293 ILACGGQDRSLSIWSSALPRPLLSCQNVFQKSIGDVCWSPDGLSLFLCSYDGNVLVCTFE 352
Query: 368 VKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKVVSDVQAI 427
+E G +SD E+ + ++YG R + L E+ QL LE + +S
Sbjct: 353 KEEFGDMVSDEEISKAL-AKYGHGRHGIV-LPESAKQLELEETAYAILKKPSSLSTTDPT 410
Query: 428 QAPVKSS 434
P SS
Sbjct: 411 LVPQSSS 417
Score = 88 (36.0 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 644 TEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
T I T W D + V ++ G+I+FW++ C+DG L +
Sbjct: 618 TRIVALENGNTKWMDYLPRPVILVTGSIHFWSIACDDGSLHL 659
>UNIPROTKB|F5H4M2 [details] [associations]
symbol:HIRA "Protein HIRA" species:9606 "Homo sapiens"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682
GO:GO:0016568 GO:GO:0000790 GO:GO:0007369 ChiTaRS:HIRA
HGNC:HGNC:4916 EMBL:AC000068 EMBL:AC000079 EMBL:AC000085
EMBL:AC000092 IPI:IPI01012472 ProteinModelPortal:F5H4M2 SMR:F5H4M2
Ensembl:ENST00000541063 ArrayExpress:F5H4M2 Bgee:F5H4M2
Uniprot:F5H4M2
Length = 973
Score = 699 (251.1 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 138/343 (40%), Positives = 203/343 (59%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGS-G 107
E DE+ ++L + +H VNCVRW+ G Y+ASG DD++I++ ++ G +T FGS G
Sbjct: 10 EKDENIPKMLCQMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSG 69
Query: 108 EPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGH 166
+ ++E W+ LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGH
Sbjct: 70 KLANVEQWRCVSILRNHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGH 129
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPC 226
S LVKG+ WDP+G +IASQ+DD+++ +WRT DW L + + G+T RL WSP
Sbjct: 130 SGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPD 189
Query: 227 GHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKA 286
GH++ + H +A ++ER W DF+GH + VVKFN +F++
Sbjct: 190 GHYLVSAHAMNNSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK------- 242
Query: 287 APVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWS 346
NG+S K S PY A+GS+DR+++VW T RPL V F +S++D+SW+
Sbjct: 243 ------NGSS---AKPSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWT 293
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
+G + CS+DG+VA F ELG LS+ E + +S YG
Sbjct: 294 LNGLGILVCSMDGSVAFLDFSQDELGDPLSEEEKSRIHQSTYG 336
Score = 125 (49.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 44/170 (25%), Positives = 78/170 (45%)
Query: 29 ATGGGDHKVRIWNMKS-VGKNFENDESTQ-------RLLATLRDHFGSVNCVRWAKHGRY 80
A+GG D + +W + +G + S + R ++ LR+H G V V W+ H +
Sbjct: 42 ASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCVSILRNHSGDVMDVAWSPHDAW 101
Query: 81 IASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSIL 140
+AS S D ++I +F P+I TLRGH+ V L W P +
Sbjct: 102 LASCSVDNTVVIWN------AVKF-----PEI-----LATLRGHSGLVKGLTWDPVGKYI 145
Query: 141 ASGSLDNTIHIWN-MSTGICTAVLR-----GHSSLVKGVAWDPIGSFIAS 184
AS + D ++ +W + + T++ + G ++ V ++W P G ++ S
Sbjct: 146 ASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVS 195
Score = 57 (25.1 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 54/276 (19%), Positives = 108/276 (39%)
Query: 430 PVKSSV--NIGVTTKTSEPQTDNGKKSGG--VASDGLNKVSTSGRISSPVKQREYRRPDG 485
P+ SS + G + +EP + G V D +N ST +S V P
Sbjct: 459 PLDSSTPNSFGASKPCTEPVVAASARPAGDSVNKDSMNATSTPAALSPSV----LTTPS- 513
Query: 486 RKRIIP-EAVGVP-VQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSVRGT 543
+I P +A ++ T GA + L P + + K+ N +++E+ R
Sbjct: 514 --KIEPMKAFDSRFTERSKATPGAPA-LTSMTPTAVERLKEQN-------LVKELRPRDL 563
Query: 544 VGRSSDVKERSGVTARATITE---SLVIEKVPASAAG----DG-----NVGVEQSGNVKA 591
+ SSD E+ + +++++ L +E V G D ++ V+ + A
Sbjct: 564 LESSSDSDEKVPLAKASSLSKRKLELEVETVEKKKKGRPRKDSRLMPVSLSVQSPAALTA 623
Query: 592 SG-SVAATTTTLSIRV-FDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACT 649
++ + L++++ + + V + N++ +G +K + + C
Sbjct: 624 EKEAMCLSAPALALKLPIPSPQRAFTLQVSSDPSMYIEVENEVTVVGG---VKLSRLKCN 680
Query: 650 RGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
R + W +T ++ AG+ + V CE L V
Sbjct: 681 REGKE-WETVLTSRILTAAGSCDVVCVACEKRMLSV 715
Score = 47 (21.6 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 404 KQVETRTADGRRRITP 419
>UNIPROTKB|L7N2F8 [details] [associations]
symbol:HIRA "Protein HIRA" species:9606 "Homo sapiens"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] HGNC:HGNC:4916 EMBL:AC000068 Ensembl:ENST00000546308
Uniprot:L7N2F8
Length = 806
Score = 699 (251.1 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 138/343 (40%), Positives = 203/343 (59%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSG-TTEFGS-G 107
E DE+ ++L + +H VNCVRW+ G Y+ASG DD++I++ ++ G +T FGS G
Sbjct: 10 EKDENIPKMLCQMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSG 69
Query: 108 EPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN-MSTGICTAVLRGH 166
+ ++E W+ LR H+ DV+D+ WSP D+ LAS S+DNT+ IWN + A LRGH
Sbjct: 70 KLANVEQWRCVSILRNHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGH 129
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPC 226
S LVKG+ WDP+G +IASQ+DD+++ +WRT DW L + + G+T RL WSP
Sbjct: 130 SGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPD 189
Query: 227 GHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKA 286
GH++ + H +A ++ER W DF+GH + VVKFN +F++
Sbjct: 190 GHYLVSAHAMNNSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQK------- 242
Query: 287 APVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWS 346
NG+S K S PY A+GS+DR+++VW T RPL V F +S++D+SW+
Sbjct: 243 ------NGSS---AKPSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWT 293
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYG 389
+G + CS+DG+VA F ELG LS+ E + +S YG
Sbjct: 294 LNGLGILVCSMDGSVAFLDFSQDELGDPLSEEEKSRIHQSTYG 336
Score = 125 (49.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 44/170 (25%), Positives = 78/170 (45%)
Query: 29 ATGGGDHKVRIWNMKS-VGKNFENDESTQ-------RLLATLRDHFGSVNCVRWAKHGRY 80
A+GG D + +W + +G + S + R ++ LR+H G V V W+ H +
Sbjct: 42 ASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQWRCVSILRNHSGDVMDVAWSPHDAW 101
Query: 81 IASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSIL 140
+AS S D ++I +F P+I TLRGH+ V L W P +
Sbjct: 102 LASCSVDNTVVIWN------AVKF-----PEI-----LATLRGHSGLVKGLTWDPVGKYI 145
Query: 141 ASGSLDNTIHIWN-MSTGICTAVLR-----GHSSLVKGVAWDPIGSFIAS 184
AS + D ++ +W + + T++ + G ++ V ++W P G ++ S
Sbjct: 146 ASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVS 195
Score = 57 (25.1 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 54/276 (19%), Positives = 108/276 (39%)
Query: 430 PVKSSV--NIGVTTKTSEPQTDNGKKSGG--VASDGLNKVSTSGRISSPVKQREYRRPDG 485
P+ SS + G + +EP + G V D +N ST +S V P
Sbjct: 459 PLDSSTPNSFGASKPCTEPVVAASARPAGDSVNKDSMNATSTPAALSPSV----LTTPS- 513
Query: 486 RKRIIP-EAVGVP-VQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSVRGT 543
+I P +A ++ T GA + L P + + K+ N +++E+ R
Sbjct: 514 --KIEPMKAFDSRFTERSKATPGAPA-LTSMTPTAVERLKEQN-------LVKELRPRDL 563
Query: 544 VGRSSDVKERSGVTARATITE---SLVIEKVPASAAG----DG-----NVGVEQSGNVKA 591
+ SSD E+ + +++++ L +E V G D ++ V+ + A
Sbjct: 564 LESSSDSDEKVPLAKASSLSKRKLELEVETVEKKKKGRPRKDSRLMPVSLSVQSPAALTA 623
Query: 592 SG-SVAATTTTLSIRV-FDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACT 649
++ + L++++ + + V + N++ +G +K + + C
Sbjct: 624 EKEAMCLSAPALALKLPIPSPQRAFTLQVSSDPSMYIEVENEVTVVGG---VKLSRLKCN 680
Query: 650 RGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
R + W +T ++ AG+ + V CE L V
Sbjct: 681 REGKE-WETVLTSRILTAAGSCDVVCVACEKRMLSV 715
Score = 47 (21.6 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 476 KQREYRRPDGRKRIIP 491
KQ E R DGR+RI P
Sbjct: 404 KQVETRTADGRRRITP 419
>ASPGD|ASPL0000056631 [details] [associations]
symbol:AN1286 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000417 "HIR complex" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0006995 "cellular
response to nitrogen starvation" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin silencing
at centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BN001308
eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:AACD01000017 RefSeq:XP_658890.1 ProteinModelPortal:Q5BDU4
STRING:Q5BDU4 GeneID:2877067 KEGG:ani:AN1286.2 HOGENOM:HOG000208205
KO:K11293 OrthoDB:EOG4QRMC9 Uniprot:Q5BDU4
Length = 1031
Score = 623 (224.4 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 160/490 (32%), Positives = 249/490 (50%)
Query: 12 EGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNC 71
+ +++S DV P R T GD VRIW+ +++ D + + LA++ +H G+++
Sbjct: 37 KAFEVYSCDVSPDGSRLVTAAGDGYVRIWSTEAICG--AEDANKPKQLASMSNHSGTIHT 94
Query: 72 VRWAKHGRYIASGSDDQVILIH--EKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVV 129
VR++ +G+Y+ASG+DD+++ I+ + P S FGS E P +ENW+ L GH DV
Sbjct: 95 VRFSPNGKYLASGADDKIVCIYTLDANPPSHAASFGSNEAPPVENWRTIRRLIGHDNDVQ 154
Query: 130 DLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDK 189
DL WS D SIL S LD+ + +W+ T L H S VKG+ +DP + A+ SDD+
Sbjct: 155 DLGWSCDSSILVSVGLDSKVVVWSGHTFEKLKTLSVHQSHVKGITFDPANKYFATASDDR 214
Query: 190 TVIIWR-TSDW--SLAHRTDGHWA--KSLGSTF--------FRRLGWSPCGHFITTTHGF 236
TV I+R TS S AH ++ +++ + F FRR WSP G I +
Sbjct: 215 TVRIFRFTSPAPNSTAHDQMNNFVLEQTITAPFQNSPLTAYFRRCSWSPDGLHIAAANAV 274
Query: 237 QKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTS 296
P S ++ RG W + +GH AP+ V F+ ++ S Q +K N
Sbjct: 275 NGPVSSVAIINRGGWDGDINLIGHEAPVEVCAFSPRLY-----SPQPIKK------NQQD 323
Query: 297 KIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACS 356
P VIA D++++VW T++PRP+ VA+ +S+ DL+WSPDG L+A +
Sbjct: 324 SHDHVAQAPVTVIACAGGDKSLSVWITSNPRPIVVAQELAAKSISDLAWSPDGSCLYATA 383
Query: 357 LDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETT 416
LDGT+ FE +LG+ + + E +E +++G R + A +AET LLLE S K
Sbjct: 384 LDGTILAVRFEDGDLGYAM-ELEENEKSLTKFGTNR-KGAGIAETTDGLLLEEKS-KAGE 440
Query: 417 TKKVVSDVQAIQAPVKSSVNIGVTTK-TSEPQTDNGKKSGGVA-SDGLNKVSTSGRISSP 474
K V + A+ ++ + K T P T NG + S K +G +
Sbjct: 441 LKGVEGRMGALMGDGHATGDAVANGKPTPLPSTSNGVTPAAPSPSTDAQKSQPNGTAAPS 500
Query: 475 VKQREYRRPD 484
+ E +PD
Sbjct: 501 ASETE--KPD 508
Score = 302 (111.4 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 94/314 (29%), Positives = 141/314 (44%)
Query: 215 STFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMF 274
+ +FRR WSP G I + P S ++ RG W + +GH AP+ V F+ ++
Sbjct: 253 TAYFRRCSWSPDGLHIAAANAVNGPVSSVAIINRGGWDGDINLIGHEAPVEVCAFSPRLY 312
Query: 275 RRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKH 334
S Q +K N P VIA D++++VW T++PRP+ VA+
Sbjct: 313 -----SPQPIKK------NQQDSHDHVAQAPVTVIACAGGDKSLSVWITSNPRPIVVAQE 361
Query: 335 FFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGR 394
+S+ DL+WSPDG L+A +LDGT+ FE +LG+ + + E +E +++G R
Sbjct: 362 LAAKSISDLAWSPDGSCLYATALDGTILAVRFEDGDLGYAM-ELEENEKSLTKFGTNRKG 420
Query: 395 LANLAETPAQLLLEAASAKETTTKK-----VVSDVQAI--------QAPVKSSVNIGVTT 441
T LL E + A E + ++ D A P+ S+ N GVT
Sbjct: 421 AGIAETTDGLLLEEKSKAGELKGVEGRMGALMGDGHATGDAVANGKPTPLPSTSN-GVTP 479
Query: 442 KTSEPQTDNGKKS-GGVASDGLNKVSTSGRISSPV---KQREYRRPDGRKRIIPEAVGVP 497
P TD K G A+ ++ + + KQR DG+KRI P V
Sbjct: 480 AAPSPSTDAQKSQPNGTAAPSASETEKPDPYQAKLERLKQRPTYTKDGKKRIAPLLVS-- 537
Query: 498 VQQEGVTGGAQSQL 511
G GGA+S L
Sbjct: 538 ----GA-GGAESSL 546
Score = 96 (38.9 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 612 GEDN---VPVCLEARPREHAVNDIVGMGSTCMMKETEIACTRGSQTLWSDRITGKVTVLA 668
GE N V V EAR A + G + + + RG Q LW D + V ++
Sbjct: 689 GESNKSRVDVVFEARNPSGA--SLTGRAAD--REPVRLTLFRGEQPLWQDFLPRTVLLVT 744
Query: 669 GNINFWAVGCEDGCLQV 685
GN N W+ CEDG + +
Sbjct: 745 GNQNMWSAACEDGSVYI 761
>SGD|S000000104 [details] [associations]
symbol:HIR1 "Subunit of the HIR complex" species:4932
"Saccharomyces cerevisiae" [GO:0000417 "HIR complex"
evidence=IDA;IPI] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IMP] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0000775 "chromosome,
centromeric region" evidence=IEA;IDA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000104 GO:GO:0003714 GO:GO:0000775 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006357 GO:GO:0003682 GO:GO:0016568 EMBL:BK006936
GO:GO:0006368 EMBL:S47695 GO:GO:0006336 HOGENOM:HOG000208205
KO:K11293 OrthoDB:EOG4QRMC9 GO:GO:0000417 EMBL:L03838 EMBL:Z35769
PIR:S41218 RefSeq:NP_009545.2 ProteinModelPortal:P32479 SMR:P32479
DIP:DIP-2365N IntAct:P32479 MINT:MINT-707704 STRING:P32479
PaxDb:P32479 EnsemblFungi:YBL008W GeneID:852275 KEGG:sce:YBL008W
CYGD:YBL008w GeneTree:ENSGT00550000074919 OMA:WAPDSSI
NextBio:970890 Genevestigator:P32479 GermOnline:YBL008W
Uniprot:P32479
Length = 840
Score = 624 (224.7 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 162/509 (31%), Positives = 255/509 (50%)
Query: 8 WVRHEG----MQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRL----- 58
W+ H +I+++DV R ATGG D K+RIW++ S+ + E + T +
Sbjct: 8 WLAHREESRKYEIYTVDVSHDGKRLATGGLDGKIRIWSIDSILRCMELESLTPEIPLPQD 67
Query: 59 ----LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE-KKPGSGTTEFGSGEPPDIE 113
L ++ H GS+ CV+++ G+Y+ASGSDD+++LI + S FGS + E
Sbjct: 68 LQMPLCSMSRHTGSITCVKFSPDGKYLASGSDDRILLIWALDEEQSSQPAFGSEH--ERE 125
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
+W V L H D+ D+ W+PD SIL + LD ++ +WN ST H SLVKGV
Sbjct: 126 HWTVRKRLVAHDNDIQDICWAPDSSILVTVGLDRSVIVWNGSTFEKLKRFDVHQSLVKGV 185
Query: 174 AWDPIGSFIASQSDDKTVIIWR---TSD--WSLAHRTDGHWAKSLGSTFFRRLGWSPCGH 228
+DP + A+ SDD+T+ I+R T D +++ H + +S +T+FRR WSP G
Sbjct: 186 VFDPANKYFATTSDDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQ 245
Query: 229 FITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAP 288
I + P S ++ RG W +GH+AP V +FN +F RN+ Q+ P
Sbjct: 246 HIAVPNATNGPVSSVAIVNRGTWDTNVSLIGHDAPTEVARFNPRLFERNAGVKQKKDDDP 305
Query: 289 VGWTNGTS--KIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWS 346
G + K+ + +V+A QD+++ VW+T+ PRP+ VA +S+ D+SW+
Sbjct: 306 ENALVGQNDDKVHHFDKNIDSVVATAGQDKSLAVWSTSRPRPILVAFDIANKSITDMSWN 365
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGHRLS-DAELDELKRSRYGDVRGRLANLAETPAQL 405
PDG LF SLD ++ F FE ELG + + +++L R YG + L + E+ QL
Sbjct: 366 PDGSLLFVASLDSSITLFKFENNELGKPIPLEKNMEQLYR--YGVDKDSL-DFPESINQL 422
Query: 406 LLEAASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKV 465
LLE + TK S + P + T ++ Q DN S S+ +N +
Sbjct: 423 LLEDQTKSFKHTKISTSKLGE-NHPT-------LATNSASNQKDNNDASVS-RSEHIN-I 472
Query: 466 STSGRISSPVKQREYRRPDGRKRIIPEAV 494
R + + G+KR+ P +
Sbjct: 473 LIPKRKKDAILNKAVTLKSGKKRVAPTLI 501
Score = 43 (20.2 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 444 SEPQTDNGKKSGGVASDGL-NKVSTSGRISSPVKQREYRRPDGRKRIIPEAV 494
SE + D+ +GG SDG N + +S ++ ++ R ++ E +
Sbjct: 581 SELENDDADNAGGKGSDGTSNSIDDIAVLSE--EENDFHRMTLNAKLTQEKI 630
>DICTYBASE|DDB_G0276423 [details] [associations]
symbol:hira "histone cell cycle regulation defective
homolog A" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007110 InterPro:IPR011494 InterPro:IPR015943
InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0276423 GO:GO:0005634 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:AAFI02000015 KO:K11293 RefSeq:XP_643117.1
ProteinModelPortal:Q86HX1 STRING:Q86HX1 EnsemblProtists:DDB0233325
GeneID:8620522 KEGG:ddi:DDB_G0276423 OMA:DIHPDES
ProtClustDB:CLSZ2497234 Uniprot:Q86HX1
Length = 1114
Score = 580 (209.2 bits), Expect = 1.5e-59, Sum P(2) = 1.5e-59
Identities = 151/497 (30%), Positives = 243/497 (48%)
Query: 5 KPSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGK-NFENDESTQRLLATLR 63
KP WV H G+ I+SID+ P R ATGGGD K++IW+M + E D +LL ++
Sbjct: 5 KPQWVSHGGLSIYSIDIHPDGTRVATGGGDAKIKIWSMAPISLLEAEEDAGIPKLLCSIE 64
Query: 64 D-HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLR 122
+ HF SVN V+W+K G+Y+ASGSDD++ +I G + S ENW TLR
Sbjct: 65 NAHFHSVNSVKWSKDGKYLASGSDDKLCMIW------GLSNNNSLLKNTTENWVCVATLR 118
Query: 123 GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
GH +D+ +++WSPD+ +A+ S D +I IW + + L H VKG+ WDP+G ++
Sbjct: 119 GHASDISEVSWSPDNKYIATCSFDKSIIIWETNKFQMVSKLEEHKGFVKGLTWDPLGRYL 178
Query: 183 ASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHS 242
ASQS+DK++IIWRTSDW + + S G++FF R W+P G FI THG H+
Sbjct: 179 ASQSEDKSLIIWRTSDWVVETIVTEPFKHS-GNSFFLRPSWTPDGQFIVATHGINNATHT 237
Query: 243 APVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKE 302
++ R +W D +GH ++V + + +++ + Q+ +G + T +
Sbjct: 238 GVLVSRTDWDIGLDLVGHRKAVVVSRCSSKIYKDFKSRDQKFCLILLGGQDSTLSLWSSS 297
Query: 303 SQPYNVIAIGSQ-DRTITVWTTASPRPLFVAKHFFTQSVVD-LSWSPDGYSLFACSLDGT 360
S P +++ S D+ I + S FVA T V +S P+ + +
Sbjct: 298 S-PRSLMVTRSLFDQCIQDISWCSDGYSFVACS--TDGTVGYISLDPE--EIGGSPIGPE 352
Query: 361 VANFHFEVKELGHRLSDA-ELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKK 419
F+ + DA +D+ YG G L++ A + + +L E +
Sbjct: 353 EKQIFFK-----NYYGDAVTIDKEGNVIYGAAGGNLSSAANSGSHAILP-----ENPDQL 402
Query: 420 VVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVK-QR 478
+ + A V S V+ G + + ++GG N ST ++ Q+
Sbjct: 403 AMEESNA--NGVGSGVSGGGVSGGGGSGSGINNQNGGENHSKTNSTSTLQPTQLAMQNQK 460
Query: 479 EYRRPDGRKRIIPEAVG 495
+ P G++RI P +G
Sbjct: 461 QTIMPGGKRRITPIFIG 477
Score = 67 (28.6 bits), Expect = 1.5e-59, Sum P(2) = 1.5e-59
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 655 LWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
LW +RI G++T++ GN N+ A D L +
Sbjct: 770 LWENRIAGRITLITGNKNWCAATTLDSLLYI 800
>DICTYBASE|DDB_G0277941 [details] [associations]
symbol:DDB_G0277941 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277941 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000023 eggNOG:COG2319
KO:K11293 RefSeq:XP_642022.1 ProteinModelPortal:Q54Z30
EnsemblProtists:DDB0233324 GeneID:8621233 KEGG:ddi:DDB_G0277941
InParanoid:Q54Z30 OMA:TWDPMGK Uniprot:Q54Z30
Length = 476
Score = 418 (152.2 bits), Expect = 7.1e-52, Sum P(2) = 7.1e-52
Identities = 97/262 (37%), Positives = 137/262 (52%)
Query: 1 MIAEKPSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDES------ 54
MI KP WV H G IFSIDV P R AT GGD ++IWN++ + D++
Sbjct: 1 MIIVKPYWVDHHGTPIFSIDVHPDGKRLATCGGDSNIKIWNIEPISDEIMEDDADDTSNK 60
Query: 55 -----TQRLLATLR-DHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE 108
T +LL ++ H S+N ++W+K GRY+AS SDD+ ++ P F S
Sbjct: 61 RTTTPTPKLLYSINYAHSKSINSIKWSKDGRYLASVSDDRECIVWTLSP------FQSAN 114
Query: 109 PPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST-GICTAVLRGHS 167
P+I W + L+GH+AD+ D+ WS D+ LA+ SLD TI IW + GI L
Sbjct: 115 TPEI--WTSIVCLKGHSADITDVIWSADNQFLATCSLDKTILIWETTKFGIIKK-LEKQE 171
Query: 168 SLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGSTFFRRLGWSPC 226
+ G+ WDP+G ++ SQSD + IW T +W+ D L S FF R W+P
Sbjct: 172 KFINGITWDPMGKYLVSQSDG-LICIWNTINWNCEKVIKDVVGGLDLKS-FFLRSSWTPD 229
Query: 227 GHFITTTHGFQKPRHSAPVLER 248
+ +T GF K HSA ++ R
Sbjct: 230 SKYFISTQGFNKNNHSAILIGR 251
Score = 148 (57.2 bits), Expect = 7.1e-52, Sum P(2) = 7.1e-52
Identities = 44/184 (23%), Positives = 75/184 (40%)
Query: 254 TFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGS 313
TF+ +GH + V K + +F+ NS + +G + T + S P +
Sbjct: 289 TFELVGHTDVVSVSKCSPIIFKDNS--NNYFSLILLGSVDSTFSLW--LSPPTTTTTTTT 344
Query: 314 QDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGH 373
T + P+ + V K F ++ D+SW PDG S F CS+DGT+A ++ H
Sbjct: 345 DTNTNNSIKRSPPQLIMVCKEVFKNTIQDVSWCPDGLSFFVCSIDGTIAYISLKL----H 400
Query: 374 RLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKVVSDVQAIQAPVKS 433
+SD L + + N P ++ L + TK + Q + + K
Sbjct: 401 EISDGSLQPISHREKQQFFKKSYNF-NLPNEIELFIHKRNQIPTKPITRTTQEVLSTQKQ 459
Query: 434 SVNI 437
S +
Sbjct: 460 STTL 463
>FB|FBgn0033526 [details] [associations]
symbol:Caf1-105 "Caf1-105" species:7227 "Drosophila
melanogaster" [GO:0006333 "chromatin assembly or disassembly"
evidence=ISS] [GO:0006334 "nucleosome assembly" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
eggNOG:COG2319 GeneTree:ENSGT00550000074968 KO:K10751
RefSeq:NP_610589.2 UniGene:Dm.4362 ProteinModelPortal:A1Z898
SMR:A1Z898 STRING:A1Z898 PaxDb:A1Z898 PRIDE:A1Z898
EnsemblMetazoa:FBtr0088310 GeneID:36107 KEGG:dme:Dmel_CG12892
UCSC:CG12892-RA CTD:36107 FlyBase:FBgn0033526 InParanoid:A1Z898
OMA:PIAFRRK OrthoDB:EOG476HFQ PhylomeDB:A1Z898 GenomeRNAi:36107
NextBio:796901 Bgee:A1Z898 Uniprot:A1Z898
Length = 747
Score = 384 (140.2 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 130/460 (28%), Positives = 195/460 (42%)
Query: 23 PGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIA 82
P R A+GG D V IW V ++ + + L A L H +VN VRW+ +G +A
Sbjct: 31 PTICRLASGGSDAHVLIWY---VNRSDDAEGVDVELAADLSRHQRAVNAVRWSPNGELLA 87
Query: 83 SGSDDQVILIHEKKPGSGTTEF----GSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS 138
SG D+ V+ I ++K G E D E W LRGH D+ DL+W+P+
Sbjct: 88 SGDDESVVFIWKQKADHEVVNIVDADGCSEQ-DKEVWLTLKVLRGHREDIYDLSWAPNSQ 146
Query: 139 ILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
L SGS+DNT +W++ +G A+L H V+GVAWDP +IA+ S D+ + I+ +
Sbjct: 147 FLVSGSVDNTAMLWDVHSGKSLAILDDHKGYVQGVAWDPCNQYIATMSTDRQMRIFDANT 206
Query: 199 WSLAHRT--------DGH--WAKSL-----GS--TFFRRLGWSPCGHFITTTHGFQKPRH 241
+ HR + H KS+ G+ TFFRRL ++P G + T G +
Sbjct: 207 KRVLHRVSKCVLPVKEDHEMHGKSMRLYQDGTLQTFFRRLCFTPDGKLLLTPSGITD--Y 264
Query: 242 SAPVLERGEWAATFDFLGHNA--PIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIG 299
V ++ F H+ P V+ F S + P I
Sbjct: 265 DGVVKPIN---TSYGFSRHDLSKPAFVLPFPKEYAVAVRCSPVLYRLRPYNAEKNPPII- 320
Query: 300 GKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG 359
S PY +I + + + T P P + + + DL+WS DG L S DG
Sbjct: 321 ---SLPYRMIYAVATKNAVFFYDTQQPVPFAIVSNIHYSRLTDLAWSSDGTVLIVSSTDG 377
Query: 360 TVANFHFEVKELGHRLSDAE--LDE-LKRSRYGDV----RGRLANLAETPAQLLLEAASA 412
+ FE ELG D E L LK S V R +L ++ + L+ S
Sbjct: 378 YCSLITFEPTELGDCYEDMETVLSVVLKSSENATVLKKKRQKLRKVSLDEPRKPLQEKSK 437
Query: 413 KETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGK 452
T + + + + P + N T S +T++ K
Sbjct: 438 PNTIRRASEAGITEVGEPELDAENDSSTHSVSSNKTNSPK 477
Score = 313 (115.2 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 73/210 (34%), Positives = 107/210 (50%)
Query: 7 SWVRHEGMQIFSIDVQPGAL--------RFATGGGDHKVRIWNMKSVGKNFENDESTQRL 58
SW H + S+D+Q L R A+GG D V IW V ++ + + L
Sbjct: 9 SW--HNRDPVLSVDIQQNGLGLRSPTICRLASGGSDAHVLIWY---VNRSDDAEGVDVEL 63
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF----GSGEPPDIEN 114
A L H +VN VRW+ +G +ASG D+ V+ I ++K G E D E
Sbjct: 64 AADLSRHQRAVNAVRWSPNGELLASGDDESVVFIWKQKADHEVVNIVDADGCSEQ-DKEV 122
Query: 115 WKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
W LRGH D+ DL+W+P+ L SGS+DNT +W++ +G A+L H V+GVA
Sbjct: 123 WLTLKVLRGHREDIYDLSWAPNSQFLVSGSVDNTAMLWDVHSGKSLAILDDHKGYVQGVA 182
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHR 204
WDP +IA+ S D+ + I+ + + HR
Sbjct: 183 WDPCNQYIATMSTDRQMRIFDANTKRVLHR 212
Score = 46 (21.3 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 21/96 (21%), Positives = 39/96 (40%)
Query: 558 ARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTTTLSIRVFDKKEGEDNVP 617
+ A ITE E + + +V ++ + K S T ++IR +K +P
Sbjct: 445 SEAGITEVGEPELDAENDSSTHSVSSNKTNSPKTKASEEEKPTPIAIRRSPRKNSTAPMP 504
Query: 618 VCLEARPREHAVNDIVGMGSTCMMKETEIACTRGSQ 653
+ + PR+ D S+ E E+ T+ +Q
Sbjct: 505 IAIRRAPRKP--EDKGNSESSKPKDEMEVTHTKTTQ 538
Score = 46 (21.3 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 29/171 (16%), Positives = 63/171 (36%)
Query: 382 ELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKVVSDVQAIQAPVKSSVNIGVTT 441
+++++ V+ +++ A PA+ A + K+++S ++P K S
Sbjct: 538 QVQKTVASPVKRKVSTEAVPPAETSQPALAVIPVFEKEIISSDDKFESPEKKSRPATPIQ 597
Query: 442 KTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQREYRRPDGRKRIIPEAVGVPVQQE 501
+P+T G + L S + ++P+ R R P + + VP+++
Sbjct: 598 VRRQPRTP-----GSSSQFNLTPKSQPAKQATPIAVR--RTPRVLIEMPVNSPVVPMEEA 650
Query: 502 GVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSV-RGTVGRSSDVK 551
+ P D RK V + + T R+ D++
Sbjct: 651 MDAWPLDESITPLPATKKDSRKPLPETVKTETKPAVIEASEATCERTEDIR 701
Score = 39 (18.8 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 573 ASAAGDGNVGVEQ--SGNVKASGSVAATTTTLSIRVFDKKEGEDNVPVCLEARPREHA 628
AS AG VG + + N ++ SV++ T S + +E E P+ + PR+++
Sbjct: 444 ASEAGITEVGEPELDAENDSSTHSVSSNKTN-SPKTKASEE-EKPTPIAIRRSPRKNS 499
>TAIR|locus:2174784 [details] [associations]
symbol:FAS2 "AT5G64630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=IDA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0033186 "CAF-1 complex" evidence=IPI] [GO:0031507
"heterochromatin assembly" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010026 "trichome differentiation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=IGI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0009555 GO:GO:0008283
GO:GO:0006351 GO:GO:0000724 GO:GO:0048366 GO:GO:0009933
GO:GO:0006334 GO:GO:0005678 GO:GO:0031507 EMBL:AB010076
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT GO:GO:0010026
EMBL:AB027230 EMBL:AF375435 EMBL:AY074827 IPI:IPI00534662
RefSeq:NP_568990.1 RefSeq:NP_974991.1 UniGene:At.28741
ProteinModelPortal:Q9SXY1 SMR:Q9SXY1 STRING:Q9SXY1 PRIDE:Q9SXY1
EnsemblPlants:AT5G64630.2 GeneID:836584 KEGG:ath:AT5G64630
GeneFarm:3331 TAIR:At5g64630 InParanoid:Q9SXY1 PhylomeDB:Q9SXY1
ProtClustDB:CLSN2690078 Genevestigator:Q9SXY1 Uniprot:Q9SXY1
Length = 487
Score = 290 (107.1 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 66/188 (35%), Positives = 105/188 (55%)
Query: 7 SWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF 66
SW H+G + ++D P + AT G D+ +++W + S G+ E + ++L H
Sbjct: 9 SW--HDGKPVLTVDFHPISGLLATAGADYDIKLWLINS-GQA-EKKVPSVSYQSSLTYHG 64
Query: 67 GSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTA 126
+VN +R++ G +ASG+D + I + P S T + +WKV +L H
Sbjct: 65 CAVNTIRFSPSGELLASGADGGELFIWKLHP-SETNQ----------SWKVHKSLSFHRK 113
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQS 186
DV+DL WSPDD+ L SGS+DN+ IW+++ G +L H V+GVAWDP+ ++AS S
Sbjct: 114 DVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLS 173
Query: 187 DDKTVIIW 194
D+T I+
Sbjct: 174 SDRTCRIY 181
Score = 136 (52.9 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 71/287 (24%), Positives = 123/287 (42%)
Query: 216 TFFRRLGWSPCGHFITTTHGFQK--PRHSAP----VLERGEWAA-TFDFLGHNAPIIVVK 268
+FFRRL WSP G F+ G K P A V R + + G + P++VV+
Sbjct: 229 SFFRRLSWSPDGSFLLIPAGSFKVSPTSEAVNATYVFSRKDLSRPALQLPGASKPVVVVR 288
Query: 269 FNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVI-AIGSQDRTITVWTTASPR 327
F F+ +SS+E G K+ PY ++ AI + + ++ ++ T
Sbjct: 289 FCPVAFKLRGSSSEE----------GFFKL------PYRLVFAIATLN-SVYIYDTECVA 331
Query: 328 PLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSR 387
P+ V ++ D++WSP+ L S DG FE KELG +S + K+
Sbjct: 332 PIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDKELGEAVS---ISVGKKPV 388
Query: 388 YGDVRGRLANLAETPAQLLLEAASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQ 447
G+ + +L E +L+ E + ++ + ++ Q P+ S + K Q
Sbjct: 389 DGEEKKH--DL-EKGDELMTETTPDESKKQAELEQNEESKQ-PLPSKITTDGKEKEHIMQ 444
Query: 448 TDNGKKSGGVASDGLNKVSTSGRISSPVKQREYRRPDGRKRIIPEAV 494
+ + + N+ S ++++PV + P RKRI P A+
Sbjct: 445 KTDDEVMTETRHEEENQPLQS-KVNTPVSNK----P-ARKRITPMAI 485
Score = 96 (38.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 28/119 (23%), Positives = 49/119 (41%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL------VKGV 173
+L H V + +SP +LASG+ + IW + + H SL V +
Sbjct: 59 SLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDL 118
Query: 174 AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
W P +++ S S D + IIW + S+ D H + + + W P ++ +
Sbjct: 119 QWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH------CHYVQGVAWDPLAKYVAS 171
Score = 61 (26.5 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 25/96 (26%), Positives = 37/96 (38%)
Query: 7 SWVRHEGMQIFSIDV-----QPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLAT 61
SW H+ + DV P +G D+ IW++ N S ++L
Sbjct: 101 SWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDV--------NKGSVHQILDA 152
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKP 97
H V V W +Y+AS S D+ I+ KP
Sbjct: 153 ---HCHYVQGVAWDPLAKYVASLSSDRTCRIYANKP 185
Score = 38 (18.4 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 168 SLVKGVAWDPIGSFI 182
S + ++W P GSF+
Sbjct: 229 SFFRRLSWSPDGSFL 243
>ASPGD|ASPL0000014427 [details] [associations]
symbol:AN3785 species:162425 "Emericella nidulans"
[GO:0030437 "ascospore formation" evidence=IEA] [GO:0070829
"heterochromatin maintenance" evidence=IEA] [GO:0071168 "protein
localization to chromatin" evidence=IEA] [GO:0090053 "positive
regulation of chromatin silencing at centromere" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0090055
"positive regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=IEA] [GO:0035067 "negative regulation
of histone acetylation" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0003682 GO:GO:0016568 EMBL:BN001302 EMBL:AACD01000061
HOGENOM:HOG000183312 KO:K10751 OrthoDB:EOG4643MT OMA:AEHSHYV
RefSeq:XP_661389.1 ProteinModelPortal:Q5B6P5
EnsemblFungi:CADANIAT00004930 GeneID:2873200 KEGG:ani:AN3785.2
Uniprot:Q5B6P5
Length = 684
Score = 316 (116.3 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 72/208 (34%), Positives = 107/208 (51%)
Query: 7 SWVRHEGMQIFSIDVQP-GALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDH 65
+W ++ I+S+ P G R AT G D+ VR+W ++ VG+ E L+TL H
Sbjct: 9 AW-HNDNAPIYSVHFDPNGKGRLATAGNDNNVRLWKVEPVGQ-----ERKVTYLSTLVKH 62
Query: 66 FGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHT 125
+VN VR++ G +AS DD +L+ FG D E W+V R
Sbjct: 63 TQAVNVVRFSPKGEMLASAGDDGNVLLWVPSELQTQPGFGEDRADDKETWRVKHMCRSSG 122
Query: 126 ADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
A++ DL WSPD + +GS+DN I+N TG + HS V+GVAWDP+ F+A+Q
Sbjct: 123 AEIYDLAWSPDGVFIITGSMDNIARIYNAQTGQMVRQIAEHSHYVQGVAWDPLNEFVATQ 182
Query: 186 SDDKTVIIW--RTSDWSLAHRTDGHWAK 211
S D++V I+ +T D + G + K
Sbjct: 183 SSDRSVHIYSLKTKDGQFTLTSHGKFLK 210
Score = 108 (43.1 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 303 SQPYNVI-AIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S PY V+ A+ +QD + V+ T PL V + + DL+WS DG +L S DG
Sbjct: 451 SLPYRVVYAVATQD-AVLVYDTQQQAPLCVVSNLHFATFTDLAWSNDGLTLIMSSSDGFC 509
Query: 362 ANFHFEVKELG 372
+ F ELG
Sbjct: 510 STLSFAPGELG 520
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/79 (31%), Positives = 34/79 (43%)
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLA-----HRTDG-------HWAKSL 213
H+ V V + P G +AS DD V++W S+ R D H +S
Sbjct: 62 HTQAVNVVRFSPKGEMLASAGDDGNVLLWVPSELQTQPGFGEDRADDKETWRVKHMCRSS 121
Query: 214 GSTFFRRLGWSPCGHFITT 232
G+ + L WSP G FI T
Sbjct: 122 GAEIYD-LAWSPDGVFIIT 139
Score = 50 (22.7 bits), Expect = 1.7e-32, Sum P(3) = 1.7e-32
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 201 LAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
L R +A ++FFRRL ++P G + T G K
Sbjct: 307 LGVRNANIYANETFTSFFRRLTFTPDGSLLLTPAGQYK 344
Score = 41 (19.5 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 428 QAPVKSS-VNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQREYR 481
+AP S + +G T+ T G++S + + T+ ++ PV YR
Sbjct: 401 EAPEPSKHITLGTTSAEDASATSTGEESKNNITAKPFESPTANQLPPPVFSLPYR 455
>CGD|CAL0004103 [details] [associations]
symbol:CAC2 species:5476 "Candida albicans" [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0030437 "ascospore formation"
evidence=IEA] [GO:0070829 "heterochromatin maintenance"
evidence=IEA] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IEA] [GO:0006335 "DNA replication-dependent nucleosome
assembly" evidence=IEA] [GO:0090053 "positive regulation of
chromatin silencing at centromere" evidence=IEA] [GO:0034504
"protein localization to nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004103 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 KO:K10751 EMBL:AACQ01000199
RefSeq:XP_711422.1 ProteinModelPortal:Q59NY5 STRING:Q59NY5
GeneID:3646978 KEGG:cal:CaO19.6670 Uniprot:Q59NY5
Length = 460
Score = 348 (127.6 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 104/372 (27%), Positives = 182/372 (48%)
Query: 27 RFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSD 86
R ATGGGD+ +RIW + S ++ ++TL+ H +VN VR+ G +AS D
Sbjct: 42 RLATGGGDNNIRIWKITS--------SNSVEYMSTLQKHSQAVNAVRFNPRGDILASAGD 93
Query: 87 DQVILIHEKKPGSGTTEFGSGEPPDI-ENWKVAMTLRGHTADVVDLNWSPDDSILASGSL 145
D +L+ +K T S E D+ E+W+V T+R TA+++D+ WSP+ + +GS+
Sbjct: 94 DGTLLLWKKSENIIKT-LESEEDEDLKESWQVVGTIRSSTAEIMDICWSPNGEQIVTGSM 152
Query: 146 DNTIHIWNM--STGICTAV-LRG---HSSLVKGVAWDPIGSFIASQSDDKTVIIWRTS-- 197
DN + ++ + S G T +R H+ ++GV WDP+ FI SQS D++V +++ S
Sbjct: 153 DNILRVYQLEFSPGKITGTFIRSFSDHTHYIQGVFWDPLNKFIVSQSADRSVNVYQISPS 212
Query: 198 -----DWSLAHRTD--G----HWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVL 246
+ + H+ G ++ ++L S FFRRL +SP G + T G ++ +
Sbjct: 213 ESNSIEINFRHKFQKFGNLYLYYPETLQS-FFRRLAFSPDGSILVTPAGLEETSSN---- 267
Query: 247 ERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAA--PVGW-TNGTSKIGGKES 303
E ++ A + F +++ S + + PV + ++G S +
Sbjct: 268 ---ETLNNVLYIYSRASL----FTSPIYKITGLSKPAIAVSFNPVKYKSDGPSTL----K 316
Query: 304 QPYNVI-AIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVA 362
PY ++ A+ +QD + T + +PL + + S+ DL W+ DG + S DG +
Sbjct: 317 LPYKLVFAVATQDGVVLYSTQDNFKPLGLVSNLHYSSITDLKWTVDGSRVIISSTDGFCS 376
Query: 363 NFHFEVKELGHR 374
+F G R
Sbjct: 377 TINFPGSAFGER 388
Score = 38 (18.4 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 572 PASAAGDGNVGVEQSGNVKASGSVAATTT 600
P SA G+ +GV ++ SG + T
Sbjct: 381 PGSAFGERYIGVPHDNDI-LSGEILQAKT 408
>RGD|1307634 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0031497 "chromatin
assembly" evidence=IEA;ISO] [GO:0033186 "CAF-1 complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:1307634 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:CH474083 EMBL:BC097460 IPI:IPI00370803
RefSeq:NP_001019912.1 UniGene:Rn.159953 STRING:Q4V8B4
Ensembl:ENSRNOT00000002299 GeneID:288242 KEGG:rno:288242
UCSC:RGD:1307634 InParanoid:Q4V8B4 NextBio:627840
Genevestigator:Q4V8B4 Uniprot:Q4V8B4
Length = 572
Score = 370 (135.3 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 118/399 (29%), Positives = 191/399 (47%)
Query: 7 SWVRHEGMQIFSIDVQPGAL----RFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q A R A+ G D VRIW ++ G + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQHAAACRIQRLASAGVDTAVRIWKVEK-GPD---GKAIVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDI----ENWKVA 118
H +VN VR++ G +ASG DD VIL+ + + + + ENW V
Sbjct: 63 ARHTKAVNVVRFSPTGEILASGGDDAVILLWKMNDSKEPEQIAFQDEDEAQLNKENWTVV 122
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
TLRGH DV D+ W+ D +++AS S+DNT+ IW++S G ++ H S V+GV WDP+
Sbjct: 123 KTLRGHLEDVYDICWATDGNMMASASVDNTVIIWDVSKGQKISIFNEHKSYVQGVTWDPL 182
Query: 179 GSFIASQSDDKTVIIWRTSD----WSLAHRTDGHW----AKSLG-------STFFRRLGW 223
G +IA+ S D+ + ++ T ++++ G A+S +FFRRL +
Sbjct: 183 GQYIATLSCDRVLRVYSTQKKRVAFNVSKMLSGQGPEGEARSFRMFHDDSMKSFFRRLSF 242
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+P G + T G + S + + + + L + ++ R E
Sbjct: 243 TPDGSLLLTPAGCME---SGENVTNTTYVFSREHLKRPIAHLPCPGKATLAVRCCPVYFE 299
Query: 284 VKAAPVGWTNGTSKIGGKE--SQPYNVI-AIGSQDRTITVWTTASPRPL-FVAK-HFFTQ 338
++ PV T S+ E S PY ++ A+ S+D ++ ++ T P +V+ H+ T
Sbjct: 300 LR--PVAETEKASEEPSPELVSLPYRMVFAVASED-SVLLYDTQQSFPFGYVSNIHYHTL 356
Query: 339 SVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSD 377
S D+SWS DG L S DG + FE ELG L +
Sbjct: 357 S--DISWSSDGAFLAVSSTDGYCSFVTFEKGELGVPLKE 393
Score = 45 (20.9 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 15/66 (22%), Positives = 25/66 (37%)
Query: 409 AASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTS 468
A S+ + V + + P+K +GV T + +T N G + + S
Sbjct: 369 AVSSTDGYCSFVTFEKGELGVPLKEKPVLGVRTPDTAKKTKNQNPQGSSPGSRSAEGTPS 428
Query: 469 GRISSP 474
RI P
Sbjct: 429 NRIQDP 434
>ZFIN|ZDB-GENE-040426-1947 [details] [associations]
symbol:chaf1b "chromatin assembly factor 1,
subunit B" species:7955 "Danio rerio" [GO:0048568 "embryonic organ
development" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1947 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0060041
GO:GO:0000278 GO:GO:0048568 GeneTree:ENSGT00550000074968
EMBL:CT737124 EMBL:BX571809 IPI:IPI00501028
Ensembl:ENSDART00000079222 Ensembl:ENSDART00000122052
Uniprot:E7EYR2
Length = 613
Score = 376 (137.4 bits), Expect = 5.8e-32, P = 5.8e-32
Identities = 152/574 (26%), Positives = 243/574 (42%)
Query: 7 SWVRHEGMQIFSIDVQPGA----LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q R AT G D VR+W V K + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQQSGDGKTQRLATAGVDTTVRMWR---VDKG-PDGKAVVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILI---HEKKPGSGTTEFGSGEPPDI--ENWKV 117
H +VN VR++ +ASG DD IL+ ++ K T F E + E+W V
Sbjct: 63 ARHTKAVNVVRFSPTAEVLASGGDDAAILLWKLNDNKEPEQTPTFQEEEDAQLNKESWSV 122
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
TLRGH DV D++W+ D + +ASGS+DNT +W+++ G + H S V+GVAWDP
Sbjct: 123 VKTLRGHIEDVYDISWTSDGNFMASGSVDNTAIMWDVNKGQKMCIFNDHKSYVQGVAWDP 182
Query: 178 IGSFIASQSDDKTVIIW----RTSDWSLAHRT-----DGHWAK-------SLGSTFFRRL 221
+G +I++ S D+ + ++ R +S++ T DG S+ S FFRRL
Sbjct: 183 LGQYISTLSCDRVMRVYSAHNRKKAYSISKMTSSATADGEVKNYRMFHDDSMRS-FFRRL 241
Query: 222 GWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPI--IVVKFNHSMFRRNSA 279
++P G F+ G + + F PI + ++ R S
Sbjct: 242 TFTPDGSFLLAPAGCVEAGENVT-----NTTYVFSRKSFKRPIAHLPCPSKATLAVRCSP 296
Query: 280 SSQEVKAAPVGWTNGTSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPL-FVAK-HFF 336
E++ + + + PY ++ A+ S+D +I + T P +V+ H+
Sbjct: 297 VYFELRTKRAE-DDSLKPVANTFNLPYRLVFAVASED-SIFFYDTQQTLPFGYVSNIHYH 354
Query: 337 TQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAE-LDELKRSRYGDVRGRL 395
T S DLSWS DG L S DG + F+ ELG L + L+ + S + +G+
Sbjct: 355 TLS--DLSWSRDGSFLAVSSTDGYCSFISFDEGELGTPLKEKPPLEMVTPSSTNEKKGKR 412
Query: 396 ANLAETPAQLLLEAASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSG 455
A A + A+ K+ + A A K+S ++ T + PQ K
Sbjct: 413 ALANGRTASPVPRQANTPAAQDKE--KEGSAGPASSKTS-SVSGTEEKRTPQALKTKAQP 469
Query: 456 GVASDGLNKVSTSGRISSPVKQREYRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQL--HD 513
+ LN + G+ S+P + P P P G +++ L H
Sbjct: 470 RRIT--LNTLEGWGKPSTP------KSPAAASSTAPST---PKSAPSTPGSSRAPLTPHT 518
Query: 514 FPPVSSDHRKDNNGVVPADGVMREVSVRGTVGRS 547
P NG P R +S+ V +S
Sbjct: 519 APSTPLGPLNSKNGTTPKGPTPRRISLTPVVSKS 552
>UNIPROTKB|Q13112 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0042393 "histone binding" evidence=NAS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0033186
"CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin assembly"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=TAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=TAS]
[GO:0006461 "protein complex assembly" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005737 GO:GO:0006461
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 GO:GO:0051082 GO:GO:0006281
eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682 GO:GO:0007049
GO:GO:0042393 GO:GO:0006335 GO:GO:0033186 HOGENOM:HOG000183312
KO:K10751 OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
EMBL:U20980 EMBL:AP000694 EMBL:AP001725 EMBL:BC021218 EMBL:X98262
IPI:IPI00011857 PIR:B56731 RefSeq:NP_005432.1 UniGene:Hs.75238
ProteinModelPortal:Q13112 SMR:Q13112 DIP:DIP-29243N IntAct:Q13112
STRING:Q13112 PhosphoSite:Q13112 DMDM:3121829 PaxDb:Q13112
PRIDE:Q13112 DNASU:8208 Ensembl:ENST00000314103 GeneID:8208
KEGG:hsa:8208 UCSC:uc002yvj.3 GeneCards:GC21P037757 HGNC:HGNC:1911
HPA:CAB033604 HPA:HPA021679 MIM:601245 neXtProt:NX_Q13112
PharmGKB:PA26447 HOVERGEN:HBG050780 InParanoid:Q13112
PhylomeDB:Q13112 ChiTaRS:CHAF1B GenomeRNAi:8208 NextBio:30919
Bgee:Q13112 CleanEx:HS_CHAF1B CleanEx:HS_MPP7 Genevestigator:Q13112
GermOnline:ENSG00000159259 Uniprot:Q13112
Length = 559
Score = 373 (136.4 bits), Expect = 6.4e-32, P = 6.4e-32
Identities = 142/493 (28%), Positives = 224/493 (45%)
Query: 7 SWVRHEGMQIFSIDVQPGAL----RFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q G R A+ G D VRIW ++ G + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEK-GPD---GKAIVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHE----KKPGSGTTEFGSGEPPDIENWKVA 118
H +VN VR++ G +ASG DD VIL+ + K+P + + ENW V
Sbjct: 63 ARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVV 122
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
TLRGH DV D+ W+ D +++AS S+DNT IW++S G ++ H S V+GV WDP+
Sbjct: 123 KTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPL 182
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRT---------DGHWAKSLG-------STFFRRLG 222
G ++A+ S D+ + ++ +A +G A+S +FFRRL
Sbjct: 183 GQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGE-ARSYRMFHDDSMKSFFRRLS 241
Query: 223 WSPCGHFITTTHGFQKPRHSAPVLERGE--WAATFDFLGHNAPIIVVKFNHSMFRRNSAS 280
++P G + T G +E GE T+ F N +K + +
Sbjct: 242 FTPDGSLLLTPAG---------CVESGENVMNTTYVFSRKN-----LKRPIAHLPCPGKA 287
Query: 281 SQEVKAAPVGWTNGTSKIGGKE--SQPYNVI-AIGSQDRTITVWTTASPRPL-FVAK-HF 335
+ V+ PV + G E S PY ++ A+ S+D ++ ++ T P +V+ H+
Sbjct: 288 TLAVRCCPVYFELRPVVETGVELMSLPYRLVFAVASED-SVLLYDTQQSFPFGYVSNIHY 346
Query: 336 FTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAEL------DELKRSRYG 389
T S D+SWS DG L S DG + FE ELG L + + D K+++
Sbjct: 347 HTLS--DISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQ 404
Query: 390 DVRGRLAN---LAETPAQLLLEAAS-------AKETTTKKVVSDVQAIQAPVKSSVNIGV 439
RG + TPA + +S A++ V+ D +I VKS +
Sbjct: 405 THRGSSPGPRPVEGTPASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPS 464
Query: 440 TTKTSEPQTDNGK 452
KT +P + N K
Sbjct: 465 EEKTLQPSSQNTK 477
>MGI|MGI:1314881 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1 complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:1314881 GO:GO:0005829
GO:GO:0005813 GO:GO:0005654 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 GeneTree:ENSGT00550000074968
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT CTD:8208
OrthoDB:EOG4G4GQD PRINTS:PR00319 HOVERGEN:HBG050780 EMBL:AK011243
EMBL:BC013532 IPI:IPI00132770 RefSeq:NP_082359.1 UniGene:Mm.274222
ProteinModelPortal:Q9D0N7 SMR:Q9D0N7 STRING:Q9D0N7
PhosphoSite:Q9D0N7 PRIDE:Q9D0N7 Ensembl:ENSMUST00000023666
Ensembl:ENSMUST00000117099 GeneID:110749 KEGG:mmu:110749
UCSC:uc008aac.1 InParanoid:Q9D0N7 NextBio:364585 Bgee:Q9D0N7
CleanEx:MM_CHAF1B Genevestigator:Q9D0N7
GermOnline:ENSMUSG00000022945 Uniprot:Q9D0N7
Length = 572
Score = 373 (136.4 bits), Expect = 8.0e-32, P = 8.0e-32
Identities = 126/459 (27%), Positives = 208/459 (45%)
Query: 7 SWVRHEGMQIFSIDVQPGAL----RFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q GA R A+ G D VRIW ++ G + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQHGATWKIHRLASAGVDTAVRIWKLER-GPD---GKAIVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTE--FGSGEPPDI--ENWKVA 118
H +VN VR++ G +ASG DD VIL+ + + F E + ENW V
Sbjct: 63 ARHTKAVNVVRFSPTGEILASGGDDAVILLWKMNDSKEPEQIAFQDEEEAQLNKENWTVV 122
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
TLRGH DV D+ W+ D +++ S S+DNT+ IW++S G ++ H S V+GV WDP+
Sbjct: 123 KTLRGHLEDVYDICWATDGNLMTSASVDNTVIIWDVSKGQKISIFNEHKSYVQGVTWDPL 182
Query: 179 GSFIASQSDDKTVIIWRTSD----WSLAHRTDGHW----AKSLG-------STFFRRLGW 223
G +IA+ S D+ + I+ T ++++ G A+S +FFRRL +
Sbjct: 183 GQYIATLSCDRVLRIYNTQKKRVAFNISKMLSGQGPEGEARSFRMFHDDSMKSFFRRLSF 242
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+P G + T G + S + + + L + ++ R E
Sbjct: 243 TPDGSLLLTPAGCME---SGENVTNTTYVFSRKHLKRPIAHLPCPGKATLAVRCCPVYFE 299
Query: 284 VKAAPVGWTNGTSKIGGKE--SQPYNVI-AIGSQDRTITVWTTASPRPL-FVAK-HFFTQ 338
++ PV T S+ E + PY ++ A+ S+D ++ ++ T P +V+ H+ T
Sbjct: 300 LR--PVAETEKASEEPSPELVNLPYRMVFAVASED-SVLLYDTQQSFPFGYVSNIHYHTL 356
Query: 339 SVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANL 398
S D+SWS DG L S DG FE ELG L + + ++ +
Sbjct: 357 S--DISWSSDGAFLAISSTDGYCTFVTFEKGELGIPLKEKPVLSIRTPDTAKKAKNQTHQ 414
Query: 399 AETPAQLLLEAASAKETT--TKKVVSDVQAIQAPVKSSV 435
+P +E + T + + Q+P S++
Sbjct: 415 GSSPGSRSVEGTPSNRTQDPSSPCTTPSPTTQSPAPSAI 453
>UNIPROTKB|F1P2D7 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0033186 "CAF-1 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:AADN02010795 IPI:IPI01017347 Ensembl:ENSGALT00000025844
Uniprot:F1P2D7
Length = 566
Score = 299 (110.3 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 83/254 (32%), Positives = 128/254 (50%)
Query: 7 SWVRHEGMQIFSIDVQPGA----LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q G R A+ G D VR+W ++ G + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQHGTDGKINRLASAGVDTAVRVWKVEK-GPD---GKAIVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTE---FGSGEPPDI--ENWKV 117
H +VN VR++ G +ASG DD VIL+ K S E F + + ENW V
Sbjct: 63 ARHTKAVNVVRFSPSGEVLASGGDDAVILLW-KLNDSKELEPLAFQDEDEAQLNKENWTV 121
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
TLRGH DV D+ W+ D + +AS S+DNT +W++ G ++L H S V+G+ WDP
Sbjct: 122 VKTLRGHLEDVYDICWTSDGNYMASASVDNTAIMWDVVKGQKVSILNEHKSYVQGITWDP 181
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRT---------DGHWAKSLG-------STFFRRL 221
+G +IA+ S D+ + ++ T +A +G A+S +FFRRL
Sbjct: 182 LGQYIATLSCDRVLRVYNTQTKRVAFNVTKMPSESGAEGE-ARSYRMFHDDSMKSFFRRL 240
Query: 222 GWSPCGHFITTTHG 235
++P G + T G
Sbjct: 241 SFTPDGSLLLTPAG 254
Score = 110 (43.8 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 60/228 (26%), Positives = 90/228 (39%)
Query: 305 PYNVI-AIGSQDRTITVWTTASPRPL-FVAK-HFFTQSVVDLSWSPDGYSLFACSLDGTV 361
PY ++ A+ S+D ++ + T P +V+ H+ T S D+SWS DG L S DG
Sbjct: 321 PYRLVFAVASED-SVLFYDTEQSFPFGYVSNIHYHTLS--DISWSSDGAFLAISSTDGYC 377
Query: 362 ANFHFEVKELGHRLSDAELDELKRSRYGD--VRGRLANLAETPAQLLLEAASAKETTTKK 419
+ FE ELG L + ++ S + V+ N +P L E S T +
Sbjct: 378 SFVTFEKDELGIPLKEKPQIHVRTSVVTEKKVKKSQPNKVISPGSRLTEGTSLSTPTLQP 437
Query: 420 VVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQRE 479
A P S +G+ K + +K AS KV+ RI+ Q
Sbjct: 438 KTPVAAAKDLP---STPVGI--KNVPVSSSEERKISQPASQS-TKVNQPRRITLNTLQAW 491
Query: 480 YRRPDGRKRIIPEAVGVP--VQQEGVTGGAQSQLHDFPPVSSDHRKDN 525
+ P R +IP P V + V S+ P+ SD N
Sbjct: 492 SKTPR-RVNLIPLKPDTPASVYTDTVPVPPSSEQEHERPLPSDDSLQN 538
Score = 42 (19.8 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 301 KESQPYNVIAIGSQ--DRTITVWTTASPR-PLFVAK 333
K+SQP VI+ GS+ + T T P+ P+ AK
Sbjct: 410 KKSQPNKVISPGSRLTEGTSLSTPTLQPKTPVAAAK 445
>UNIPROTKB|Q5R1S9 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031497 "chromatin assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 HOGENOM:HOG000183312 KO:K10751
EMBL:AB195693 EMBL:AJ719705 IPI:IPI00585257 RefSeq:NP_001008677.2
UniGene:Gga.8862 ProteinModelPortal:Q5R1S9 IntAct:Q5R1S9
STRING:Q5R1S9 GeneID:418514 KEGG:gga:418514 CTD:8208
InParanoid:Q5ZLM9 OrthoDB:EOG4G4GQD NextBio:20821686 PRINTS:PR00319
Uniprot:Q5R1S9
Length = 566
Score = 299 (110.3 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 83/254 (32%), Positives = 128/254 (50%)
Query: 7 SWVRHEGMQIFSIDVQPGA----LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q G R A+ G D VR+W ++ G + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQHGTDGKINRLASAGVDTAVRVWKVEK-GPD---GKAIVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTE---FGSGEPPDI--ENWKV 117
H +VN VR++ G +ASG DD VIL+ K S E F + + ENW V
Sbjct: 63 ARHTKAVNVVRFSPSGEVLASGGDDAVILLW-KLNDSKELEPLAFQDEDEAQLNKENWTV 121
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
TLRGH DV D+ W+ D + +AS S+DNT +W++ G ++L H S V+G+ WDP
Sbjct: 122 VKTLRGHLEDVYDICWTSDGNYMASASVDNTAIMWDVVKGQKVSILNEHKSYVQGITWDP 181
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRT---------DGHWAKSLG-------STFFRRL 221
+G +IA+ S D+ + ++ T +A +G A+S +FFRRL
Sbjct: 182 LGQYIATLSCDRVLRVYNTQTKRVAFNVTKMPSESGAEGE-ARSYRMFHDDSMKSFFRRL 240
Query: 222 GWSPCGHFITTTHG 235
++P G + T G
Sbjct: 241 SFTPDGSLLLTPAG 254
Score = 109 (43.4 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 61/224 (27%), Positives = 90/224 (40%)
Query: 305 PYNVI-AIGSQDRTITVWTTASPRPL-FVAK-HFFTQSVVDLSWSPDGYSLFACSLDGTV 361
PY ++ A+ S+D ++ + T P +V+ H+ T S D+SWS DG L S DG
Sbjct: 321 PYRLVFAVASED-SVLFYDTEQSFPFGYVSNIHYHTLS--DISWSSDGAFLAISSTDGYC 377
Query: 362 ANFHFEVKELGHRLSDAELDELKRSRYGD--VRGRLANLAETPAQLLLEAASAKETTTKK 419
+ FE ELG L + ++ S + V+ N +P L E S T +
Sbjct: 378 SFVTFEKDELGIPLKEKPQIHVRTSVVTEKKVKKSQPNKVISPGSRLTEGTSLSTPTLQP 437
Query: 420 VVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQRE 479
A P S +G+ K + +K AS KV+ RI+ Q
Sbjct: 438 KTPVAAAKDLP---STPVGI--KNVPVSSSEERKISQPASQS-TKVNQPRRITLNTLQAW 491
Query: 480 YRRPDGRKRIIPEAVGVP--VQQEGVTGGAQS-QLHDFPPVSSD 520
+ P R +IP P V + V S Q H+ P S D
Sbjct: 492 SKTPR-RVNLIPLKPDTPASVYTDTVPVPPSSEQEHERPLPSGD 534
Score = 42 (19.8 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 301 KESQPYNVIAIGSQ--DRTITVWTTASPR-PLFVAK 333
K+SQP VI+ GS+ + T T P+ P+ AK
Sbjct: 410 KKSQPNKVISPGSRLTEGTSLSTPTLQPKTPVAAAK 445
>UNIPROTKB|F1SGX1 [details] [associations]
symbol:CHAF1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:CU638724 ProteinModelPortal:F1SGX1 Ensembl:ENSSSCT00000013188
Uniprot:F1SGX1
Length = 559
Score = 313 (115.2 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 83/253 (32%), Positives = 130/253 (51%)
Query: 7 SWVRHEGMQIFSIDVQPGAL----RFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q G R A+ G D VRIW ++ G + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQHGTAGRIHRLASAGVDTTVRIWKVEK-GPD---GKAIVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHE----KKPGSGTTEFGSGEPPDIENWKVA 118
H +VN VR++ +G +ASG DD VIL+ + K+P + + ENW V
Sbjct: 63 ARHTKAVNVVRFSPNGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVV 122
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
TLRGH DV D+ W+ D +++AS S+DNT IW++S G ++ H S V+GV WDP+
Sbjct: 123 KTLRGHLEDVYDICWAADGNVMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPL 182
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRT---------DGHWAKSLG-------STFFRRLG 222
G ++A+ S D+ + ++ T +A +G A+S +FFRRL
Sbjct: 183 GQYVATLSCDRILRVYSTQKKRVAFNVSKMLSGVGAEGE-ARSYRMFHDDSMKSFFRRLS 241
Query: 223 WSPCGHFITTTHG 235
++P G + T G
Sbjct: 242 FTPDGSLLLTPAG 254
Score = 92 (37.4 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 303 SQPYNVI-AIGSQDRTITVWTTASPRPL-FVAK-HFFTQSVVDLSWSPDGYSLFACSLDG 359
S PY ++ A+ S+D ++ ++ T P +V+ H+ T S D+SWS DG L S DG
Sbjct: 314 SLPYRLVFAVASED-SVLLYDTQQLFPFGYVSNIHYHTLS--DISWSSDGAFLAISSTDG 370
Query: 360 TVANFHFEVKELGHRLSD 377
+ FE ELG L +
Sbjct: 371 YCSFVTFEKDELGIPLKE 388
>UNIPROTKB|A5D9H4 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9913 "Bos taurus" [GO:0033186 "CAF-1 complex" evidence=IEA]
[GO:0031497 "chromatin assembly" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:DAAA02003568 EMBL:BT030593 IPI:IPI00852539
RefSeq:NP_001091483.1 UniGene:Bt.24966 STRING:A5D9H4
Ensembl:ENSBTAT00000015764 GeneID:511654 KEGG:bta:511654
InParanoid:A5D9H4 NextBio:20870035 Uniprot:A5D9H4
Length = 575
Score = 312 (114.9 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 82/253 (32%), Positives = 131/253 (51%)
Query: 7 SWVRHEGMQIFSIDVQPGAL----RFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
+W H ++S+D Q GA R A+ G D VR+W ++ G + ++ L+ L
Sbjct: 9 AW--HNKEPVYSLDFQYGAAGRIHRLASAGVDTAVRVWKVEK-GPD---GKAIVEFLSNL 62
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHE----KKPGSGTTEFGSGEPPDIENWKVA 118
H +VN VR++ +G +ASG DD VIL+ + K+P + + ENW V
Sbjct: 63 ARHTKAVNVVRFSPNGEILASGGDDAVILLWKVNDNKEPEQVAFQDEDEAQLNKENWTVV 122
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
TLRGH DV D+ W+ D +++AS S+DNT +W++S G ++ H S V+GV WDP+
Sbjct: 123 KTLRGHLEDVYDICWATDGNLMASASVDNTAIMWDVSKGQKISIFNEHKSYVQGVTWDPL 182
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRT---------DGHWAKSLG-------STFFRRLG 222
G ++A+ S D+ + ++ T +A +G A+S +FFRRL
Sbjct: 183 GQYVATLSCDRILRVYSTQKKRVAFNVSKMLSGVGAEGE-ARSYRMFHDDSMKSFFRRLS 241
Query: 223 WSPCGHFITTTHG 235
++P G + T G
Sbjct: 242 FTPDGSLLLTPAG 254
Score = 94 (38.1 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 53/184 (28%), Positives = 82/184 (44%)
Query: 216 TFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAA--TFDFLGHNA--PI--IVVKF 269
+FFRRL ++P G + T G +E GE T+ F N PI +
Sbjct: 235 SFFRRLSFTPDGSLLLTPAG---------CVESGENVTNTTYVFSRKNLKRPIAHLPCPA 285
Query: 270 NHSMFRRNSASSQEVK-AAPVGWTNGTSKIG---GKE--SQPYNVI-AIGSQDRTITVWT 322
++ R E++ A G + + G G E S PY ++ A+ S+D ++ ++
Sbjct: 286 KATLAVRCCPVYFELRPVAEAGVLSDQGREGREPGMELVSLPYRLVFAVASED-SVLLYD 344
Query: 323 TASPRPL-FVAK-HFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAEL 380
T P +V+ H+ T S D+SWS DG L S DG + FE ELG L + +
Sbjct: 345 TQQLFPFGYVSNIHYHTLS--DISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPV 402
Query: 381 DELK 384
L+
Sbjct: 403 LSLR 406
Score = 45 (20.9 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 18/97 (18%), Positives = 34/97 (35%)
Query: 409 AASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTS 468
A S+ + V + + P+K + + T + +T SG L + + +
Sbjct: 375 AISSTDGYCSFVTFEKDELGIPLKEKPVLSLRTPDTAKKTKGQTPSGSSPGPRLGEGTPT 434
Query: 469 GRISSPVKQREYRRPDGRKRIIPEAVGVPVQQEGVTG 505
GR+ P + + P A P+ G G
Sbjct: 435 GRVQDPSSPSTTPPQAKQSQAPPAAKDTPMAALGARG 471
>POMBASE|SPAC26H5.03 [details] [associations]
symbol:pcf2 "CAF assembly factor (CAF-1) complex subunit
B, Pcf2" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=IPI] [GO:0006335 "DNA replication-dependent nucleosome
assembly" evidence=IC] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0030437 "ascospore formation" evidence=IMP]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0043596
"nuclear replication fork" evidence=IDA] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IMP] [GO:0070829
"heterochromatin maintenance" evidence=IMP] [GO:0071168 "protein
localization to chromatin" evidence=IMP] [GO:0090053 "positive
regulation of chromatin silencing at centromere" evidence=IMP]
[GO:0090055 "positive regulation of chromatin silencing at silent
mating-type cassette" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC26H5.03 GO:GO:0005829
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006338 GO:GO:0000790 GO:GO:0043596
GO:GO:0030437 GO:GO:0016585 GO:GO:0006335 PDB:2Z3F PDBsum:2Z3F
GO:GO:0035067 GO:GO:0051574 GO:GO:0033186 HOGENOM:HOG000183312
KO:K10751 OrthoDB:EOG4643MT GO:GO:0090055 GO:GO:0071168
GO:GO:0070829 GO:GO:0090053 PIR:T38422 RefSeq:NP_594450.1
ProteinModelPortal:O13985 STRING:O13985 EnsemblFungi:SPAC26H5.03.1
GeneID:2542071 KEGG:spo:SPAC26H5.03 OMA:AEHSHYV
EvolutionaryTrace:O13985 NextBio:20803144 Uniprot:O13985
Length = 512
Score = 268 (99.4 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/187 (32%), Positives = 101/187 (54%)
Query: 16 IFSIDVQPGAL-RFATGGGDHKVRIWNMKSVGKNFENDESTQ-RLLATLRDHFGSVNCVR 73
I+S+D Q +L +FAT GGD K+RIW + ++ ST+ L+TL H +VN VR
Sbjct: 21 IYSVDFQKNSLNKFATCGGDSKIRIWQL------ITSESSTKVEYLSTLSRHTQAVNVVR 74
Query: 74 WAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDI--ENWKVAMTLRGHTADVVDL 131
+ G +A+ D+ I++ TT E + E WKV + R +++ DL
Sbjct: 75 FNPEGNILATAGDEGTIMLWVPTNTPITTLADDAEELALAKEYWKVKIVCRSMGSEIYDL 134
Query: 132 NWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTV 191
WS D + L +G++DN++ +++ TG HS V+GV WDP+ +I S+S D+++
Sbjct: 135 CWSVDSNFLIAGAMDNSLRLYDAHTGQLLTQKFDHSHYVQGVCWDPLNQYIVSESSDRSI 194
Query: 192 IIWRTSD 198
++ +
Sbjct: 195 CLYEIQE 201
Score = 124 (48.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 55/221 (24%), Positives = 97/221 (43%)
Query: 216 TFFRRLGWSPCGHFITTT------HG---FQKPRHSAPVLERGEWAA--TFDFLGHNAPI 264
+FFRR +SP G + T HG F+ P ++A + RG G P+
Sbjct: 301 SFFRRPAFSPDGLLLVTPAGRLRPHGQPNFEVP-YTAYIYTRGSITKQPVACLNGFKKPV 359
Query: 265 IVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVI-AIGSQDRTITVWTT 323
I V+F+ + NS S+ +T+ + + PY ++ A+ QD + ++ T
Sbjct: 360 IAVRFSPIHYELNSFSN-------FSFTSVSFNL------PYRMVFAVACQD-AVYIYDT 405
Query: 324 ASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELG----HRLSDAE 379
+ +P + A + ++ D++W+ DG L S+DG + FE ELG H++S E
Sbjct: 406 QTCKPFYRAVNLHYSNLTDIAWNDDGNVLLMTSIDGFCSVITFEPGELGVKSQHKISLPE 465
Query: 380 LDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV 420
S D + A T + + S+K + K++
Sbjct: 466 KRSASPSSIDDSQDNTAGGPATTTLIPRKVESSK-VSKKRI 505
>WB|WBGene00019627 [details] [associations]
symbol:K10D2.1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 InterPro:IPR019015
Pfam:PF00400 Pfam:PF07569 Pfam:PF09453 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0009792
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG4886 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
HSSP:P25147 OMA:CWIQAIT GeneTree:ENSGT00550000074919 EMBL:FO081618
PIR:E88451 RefSeq:NP_498101.2 RefSeq:NP_871692.2
ProteinModelPortal:Q09589 SMR:Q09589 DIP:DIP-26906N
MINT:MINT-1124863 STRING:Q09589 PaxDb:Q09589 PRIDE:Q09589
EnsemblMetazoa:K10D2.1a GeneID:175709 KEGG:cel:CELE_K10D2.1
UCSC:K10D2.1a CTD:175709 WormBase:K10D2.1a WormBase:K10D2.1b
HOGENOM:HOG000108885 InParanoid:Q09589 NextBio:889308
Uniprot:Q09589
Length = 935
Score = 336 (123.3 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 119/500 (23%), Positives = 208/500 (41%)
Query: 6 PSWVRHEGMQIFSIDVQPGALRFATGGGDHK-----VRIWNMKSV-GKNFENDESTQRLL 59
P++V H+ I +ID P +F T G + V +WN + V K ++E+ +LL
Sbjct: 9 PTFVGHDTGSILAIDCHPSGKKFITCGQKARTSNGLVVVWNAEPVLDKKKASNENVPKLL 68
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
+ S +C RW+ G+ A GSDD + + E + +G ++E +K
Sbjct: 69 FQVESQSQSNSC-RWSPDGKRFAFGSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECC 127
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM-STGICTAVLRGHSSLVKGVAWDPI 178
LRGH+ +V+ + WSP+ LASGS+D I I+N VL VKG++WDPI
Sbjct: 128 VLRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDIQLPVKGLSWDPI 187
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
G ++AS DK + W T W + ++ T RL WSP G ++ T +
Sbjct: 188 GKYLASLEGDKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLMTPAAVRS 247
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRN--SASSQEVKAAPVGWTNGTS 296
+ +++R W + GH+ V+ + N + ++ A VG + +
Sbjct: 248 GKPLIKLIQRQTWKSDQFLAGHHKGTTCVRAMPRLIEANLKNGKRMQLTCAAVGSRDKSI 307
Query: 297 KIGGKESQPYNVIAIGSQ-DRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFAC 355
I + I + + T+ + R L T V+ LS S G +
Sbjct: 308 SIWVFPGTLKPLFVINNIFNHTVMDFAWCG-RNLLACSQDGTVKVIHLSESVIGEMISNE 366
Query: 356 SLDGTVANFHFEVKELGHRLSDAELDELKRS-RYGDVRGRL--ANLAETPAQLLLEAASA 412
++ + ++ + L+D E DE + S D+ A+ P +L++
Sbjct: 367 AMSDLCYQI-YSIRPPRYELTDKEEDESQDSFNLSDLSSSANNASFVTCPEDVLIKR--- 422
Query: 413 KETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEP-QTDNGKKSGGVASDGLNKVSTSGRI 471
K+ + SD+Q ++ +S +K SE + K V DG ++
Sbjct: 423 KKLVAAQQSSDIQLTKSMEDNSKEN--ESKNSEKTMMEERNKQIDVRKDGKRRIQPVFCG 480
Query: 472 SSPVKQREYRRPDGRKRIIP 491
++ +G+K + P
Sbjct: 481 TTTADPMTSLSSEGKKTVAP 500
Score = 156 (60.0 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 68/282 (24%), Positives = 117/282 (41%)
Query: 300 GKESQPYNVIAIGSQDRTITVWT-TASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLD 358
GK Q A+GS+D++I++W + +PLFV + F +V+D +W G +L ACS D
Sbjct: 290 GKRMQ-LTCAAVGSRDKSISIWVFPGTLKPLFVINNIFNHTVMDFAWC--GRNLLACSQD 346
Query: 359 GTVANFHFEVKELGHRLSDAELDELKRSRYG--DVRGRLANLAETPAQLLLEAASAKETT 416
GTV H +G +S+ + +L Y R L + E +Q + +
Sbjct: 347 GTVKVIHLSESVIGEMISNEAMSDLCYQIYSIRPPRYELTDKEEDESQDSFNLSDLSSSA 406
Query: 417 TKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVK 476
S V + + + ++S+ Q + ++ N T + K
Sbjct: 407 NN--ASFVTCPEDVLIKRKKLVAAQQSSDIQLTKSMEDNSKENESKNSEKTM--MEERNK 462
Query: 477 QREYRRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMR 536
Q + R+ DG++RI P G + ++ + PP + RK VPA
Sbjct: 463 QIDVRK-DGKRRIQPVFCGTTTADPMTSLSSEGKKTVAPPPAK--RKALAPAVPAK--KG 517
Query: 537 EVSVRGTVGRSSDVKERSGVTARATITESLVIEK--VPASAA 576
EV + + D +E + I ES+ +K VPA+ +
Sbjct: 518 EVDLEDSSDSDDDDEEEEEDMEISDI-ESVRNKKRKVPATTS 558
Score = 54 (24.1 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 653 QTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
+ LW + V ++A N + +GC D CL+V
Sbjct: 651 ECLWMAVLGSPVIIVAANKHNVVLGCGDKCLRV 683
>POMBASE|SPBC15D4.03 [details] [associations]
symbol:slm9 "hira protein Slm9" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000417 "HIR complex" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0003714
"transcription corepressor activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=TAS]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0007070 "negative regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IMP]
[GO:0010389 "regulation of G2/M transition of mitotic cell cycle"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0034613 "cellular protein localization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07569
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC15D4.03
GO:GO:0005829 GO:GO:0003714 GO:GO:0034613 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0016568 GO:GO:0030466 GO:GO:0000790 GO:GO:0030702
GO:GO:0000070 GO:GO:0010389 GO:GO:0006995 GO:GO:0006336
GO:GO:0007070 KO:K11293 GO:GO:0000417 OrthoDB:EOG4J9R76 PIR:T39479
RefSeq:NP_596243.1 ProteinModelPortal:O74309 IntAct:O74309
STRING:O74309 EnsemblFungi:SPBC15D4.03.1 GeneID:2540128
KEGG:spo:SPBC15D4.03 OMA:LAGHESD NextBio:20801264 Uniprot:O74309
Length = 807
Score = 174 (66.3 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 41/146 (28%), Positives = 72/146 (49%)
Query: 130 DLNWSPDDSILASG-SLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDD 188
D N P SI S ++++T +S + V+ GH + V G+A+DP+G F+ASQS D
Sbjct: 147 DSNHQPAVSIEESKEAVESTSQSSEISFKLIK-VIEGHHTFVGGLAFDPMGQFLASQSFD 205
Query: 189 KTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLER 248
T+ +W+ S + + + + F RL WSP G I + + + + +++R
Sbjct: 206 HTLKVWKLSTFGVEKSIAKPFEQMPTGNRFLRLSWSPDGAHIASVNAVNEGAYVIAIVQR 265
Query: 249 GEWAATFDFLGHNAPIIVVKFNHSMF 274
W + +GH P+ FN ++
Sbjct: 266 DTWTYDINLVGHQGPLECATFNPYLY 291
Score = 137 (53.3 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 307 NVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
++IA + D +++W TA RP+ V S VDL WS G+ L+ SLDG + F
Sbjct: 298 SIIASAAHDGCVSIWNTACARPMAVIHELSCSSFVDLQWSTSGFELYGVSLDGNLMLLQF 357
Query: 367 EVKELGHRL 375
E E G ++
Sbjct: 358 EESEFGEKM 366
Score = 97 (39.2 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 82 ASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILA 141
A + + I E K +T S +I ++K+ + GH V L + P LA
Sbjct: 146 ADSNHQPAVSIEESKEAVESTSQSS----EI-SFKLIKVIEGHHTFVGGLAFDPMGQFLA 200
Query: 142 SGSLDNTIHIWNMST-GICTAVLRGHSSLVKG-----VAWDPIGSFIAS 184
S S D+T+ +W +ST G+ ++ + + G ++W P G+ IAS
Sbjct: 201 SQSFDHTLKVWKLSTFGVEKSIAKPFEQMPTGNRFLRLSWSPDGAHIAS 249
Score = 52 (23.4 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 41 NMKSVGKNFENDESTQ-RLLATLRDH------FGS-VNCVRWAKHGRYIASGSDDQVILI 92
N+ + K+F +S++ R++ +L H F S ++C+R+ G +A ++ L
Sbjct: 31 NVYILSKDFFYPKSSEKRIIQSLNGHKTTHLSFDSPISCIRFTYDGSCLAVATEAGTFLY 90
Query: 93 HEKK 96
H +K
Sbjct: 91 HSEK 94
Score = 51 (23.0 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 651 GSQTLWSDRITGKVTVLAGNINFWAVGCEDGCLQV 685
G+ W + + + G FWAV ED + +
Sbjct: 490 GNDCSWFSYLPNAIVLANGTSVFWAVATEDSSIYI 524
Score = 51 (23.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 23/82 (28%), Positives = 33/82 (40%)
Query: 12 EGMQIF--SIDVQPGALRFATGGGDHKVRIWNM------KSVGKNFENDESTQRLL--AT 61
EG F + P A+ DH +++W + KS+ K FE + R L +
Sbjct: 181 EGHHTFVGGLAFDPMGQFLASQSFDHTLKVWKLSTFGVEKSIAKPFEQMPTGNRFLRLSW 240
Query: 62 LRD--HFGSVNCVRWAKHGRYI 81
D H SVN V G Y+
Sbjct: 241 SPDGAHIASVNAVN---EGAYV 259
>SGD|S000004570 [details] [associations]
symbol:CAC2 "Subunit of chromatin assembly factor I (CAF-1),
with Rlf2p and Msi1p" species:4932 "Saccharomyces cerevisiae"
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IMP;IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004570 GO:GO:0000775 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 EMBL:BK006946
GO:GO:0006335 GO:GO:0033186 EMBL:X80835 PIR:S47447
RefSeq:NP_013605.1 ProteinModelPortal:Q04199 SMR:Q04199
DIP:DIP-811N IntAct:Q04199 MINT:MINT-552288 STRING:Q04199
PaxDb:Q04199 PeptideAtlas:Q04199 EnsemblFungi:YML102W GeneID:854869
KEGG:sce:YML102W CYGD:YML102w GeneTree:ENSGT00550000074968
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT OrthoDB:EOG4643MT
NextBio:977801 Genevestigator:Q04199 GermOnline:YML102W
Uniprot:Q04199
Length = 468
Score = 193 (73.0 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 49/151 (32%), Positives = 78/151 (51%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDD-QVILIHEKKPG----SGTTEFG-----SGE 108
L +L H ++N +R+ G +AS DD QV+L ++ P S FG S
Sbjct: 64 LGSLTHHEQAINVIRFNSKGDVLASAGDDGQVLLWKQEDPNTQQESVVRPFGMDAETSEA 123
Query: 109 PPDIENWKVAMTLRGHT-----ADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVL 163
+ E W V LRG + A++ DL WSPD+ + +DN+I ++++ G+
Sbjct: 124 DENKEKWVVWKRLRGGSGATAAAEIYDLAWSPDNRNIVVACMDNSIRLFDVGAGMLVCGQ 183
Query: 164 RGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
H V+GVAWDP+ FI SQS D+++ ++
Sbjct: 184 SDHGHYVQGVAWDPLNQFILSQSADRSLHVY 214
Score = 178 (67.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 69/275 (25%), Positives = 115/275 (41%)
Query: 126 ADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
A++ DL WSPD+ + +DN+I ++++ G+ H V+GVAWDP+ FI SQ
Sbjct: 146 AEIYDLAWSPDNRNIVVACMDNSIRLFDVGAGMLVCGQSDHGHYVQGVAWDPLNQFILSQ 205
Query: 186 SDDKTVIIWRT--------------SDWSLAH--------RTDGHWAKSLGSTFFRRLGW 223
S D+++ ++ S + A RT+ + +FFRR
Sbjct: 206 SADRSLHVYGVILSSAGVVTGLKLRSKIAKAELPCPGDVLRTNYLFHNETLPSFFRRCSI 265
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
SPCG + G K + + + T + ++A VK N R S
Sbjct: 266 SPCGGLVVIPSGVYKV--AGDEVANCVYVYTRSGILNSAG--GVK-NRPAIRIPSLKKPA 320
Query: 284 VKAA--PVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVV 341
+ AA PV + + PY ++ + + V+ T PL V + +
Sbjct: 321 LMAAFSPVFYETCQKSV---LKLPYKLVFAIATTNEVLVYDTDVLEPLCVVGNIHYSPIT 377
Query: 342 DLSWSPDGYSLFACSLDGTVANFHFEVK-ELGHRL 375
DL+WS DG +L S DG + + + + G R+
Sbjct: 378 DLAWSEDGSTLLISSTDGFCSYVSIDTETQFGSRI 412
Score = 117 (46.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 41/129 (31%), Positives = 59/129 (45%)
Query: 11 HEGMQIFSIDVQPGAL--RFATGGGDHKVRIW--NMKSVGKN--FENDESTQRLLATLRD 64
H+ ++S+ Q + + T GGD+KVRIW N G+N ES L +L
Sbjct: 11 HDSQPVYSLTFQKNSANDKLFTAGGDNKVRIWKLNRDENGQNGGVRKIESLD-FLGSLTH 69
Query: 65 HFGSVNCVRWAKHGRYIASGSDD-QVILIHEKKPG----SGTTEFG-SGEPPDI----EN 114
H ++N +R+ G +AS DD QV+L ++ P S FG E + E
Sbjct: 70 HEQAINVIRFNSKGDVLASAGDDGQVLLWKQEDPNTQQESVVRPFGMDAETSEADENKEK 129
Query: 115 WKVAMTLRG 123
W V LRG
Sbjct: 130 WVVWKRLRG 138
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNM---STGICTAVLRGHSSLVK 171
H V + W P + + S S D ++H++ + S G+ T L+ S + K
Sbjct: 186 HGHYVQGVAWDPLNQFILSQSADRSLHVYGVILSSAGVVTG-LKLRSKIAK 235
Score = 49 (22.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 124 HTADVVDLNWSPDDSILASGSLD 146
H + + DL WS D S L S D
Sbjct: 372 HYSPITDLAWSEDGSTLLISSTD 394
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 14/74 (18%), Positives = 31/74 (41%)
Query: 79 RYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS 138
+ +G D++V + + +G +G IE+ +L H + + ++
Sbjct: 29 KLFTAGGDNKVRIWKLNRDENGQ----NGGVRKIESLDFLGSLTHHEQAINVIRFNSKGD 84
Query: 139 ILASGSLDNTIHIW 152
+LAS D + +W
Sbjct: 85 VLASAGDDGQVLLW 98
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 226 (84.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 71/209 (33%), Positives = 93/209 (44%)
Query: 11 HEGMQIFSIDVQPG-ALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSV 69
H+G I S P + R TG GD R+W D TQ +AT++ H V
Sbjct: 133 HDGT-IISAQFSPSTSSRLVTGSGDFTARLW-----------DCDTQTPIATMKGHTNWV 180
Query: 70 NCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVV 129
+CV WA IA+GS D I + K GS P + LR HT ++
Sbjct: 181 SCVAWAPDASIIATGSMDNTIRFWDPKKGS----------P------IGDALRRHTKPIM 224
Query: 130 DLNWSP----DDS---ILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
L W P DS +LASGS DNT+ IWN+ L GH++ + V W ++I
Sbjct: 225 ALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGG-QNWI 283
Query: 183 ASQSDDKTVIIWRTSDWSLAHRTDGHWAK 211
S S DKT+ IW D H GH A+
Sbjct: 284 YSSSYDKTIRIWDAKDGKCLHILKGHAAR 312
Score = 175 (66.7 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 76/295 (25%), Positives = 120/295 (40%)
Query: 83 SGSDDQVILIHEKKPGSGTTEFGSGEPP----DIENWKVAMTLRGHTADVVDLNWSPDDS 138
+G D +I S GSG+ D + T++GHT V + W+PD S
Sbjct: 131 NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDAS 190
Query: 139 ILASGSLDNTIHIWNMSTGICTA-VLRGHSSLVKGVAWDPI------GSFI-ASQSDDKT 190
I+A+GS+DNTI W+ G LR H+ + + W P+ G ++ AS S D T
Sbjct: 191 IIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNT 250
Query: 191 VIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGE 250
V IW +L GH A + + W + T + + +G
Sbjct: 251 VRIWNVKLRTLLFTLSGHTAP-ITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGH 309
Query: 251 WAATFDFLGHNAPIIVVK--FNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNV 308
AA + L + ++ ++H+ F+ S S + KA K G+
Sbjct: 310 -AARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKER--YEACLKQSGER------ 360
Query: 309 IAIGSQDRTITVWTTA-SPRPLFVAKHFFTQSVVD-LSWSPDGYSLFACSLDGTV 361
+ S D + +W S +P + K Q VV+ S+SPDG + S D +V
Sbjct: 361 LVSASDDLQLILWDPQKSTKP--ITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
Score = 149 (57.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 33/84 (39%), Positives = 41/84 (48%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D + K TLRGH A V WS D +L S S D T+ +W++ + L GH V
Sbjct: 417 DGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQV 476
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
V W P G +AS DK V IW
Sbjct: 477 FAVDWSPDGQRVASGGADKAVRIW 500
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/112 (27%), Positives = 50/112 (44%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
+ GH V ++SPD +A+ S D+++ +W+ TG A LRGH + V AW
Sbjct: 385 MHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSR 444
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
+ S S D T+ +W + GH + + WSP G + +
Sbjct: 445 LLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFA------VDWSPDGQRVAS 490
Score = 133 (51.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
++ GH ++ +SP S L +GS D T +W+ T A ++GH++ V VAW P
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPD 188
Query: 179 GSFIASQSDDKTVIIWRTSDWS-LAHRTDGHWAKSLGSTFFRRLGWSP-CGHFITTTHGF 236
S IA+ S D T+ W S + H K + + ++ L +P G ++ +
Sbjct: 189 ASIIATGSMDNTIRFWDPKKGSPIGDALRRH-TKPIMALCWQPLHLAPDSGPYLLASGSK 247
Query: 237 QKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVK 285
V R F GH API V++ + +S+ + ++
Sbjct: 248 DNTVRIWNVKLR---TLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIR 293
Score = 64 (27.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
++ SQD T+ VW S + F + H V + WSPDG + + D V
Sbjct: 445 LLVSSSQDTTLKVWDVRSKKMKFDLPGH--EDQVFAVDWSPDGQRVASGGADKAV 497
Score = 48 (22.0 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 288 PVGWTNGTSKIGGKES-QPYN-VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSW 345
P+ +G K+ S P IA S D ++ +W + + L + +V +W
Sbjct: 381 PITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVA-AVYQCAW 439
Query: 346 SPDGYSLFACSLDGTVANFHFEVKEL 371
S D L + S D T+ + K++
Sbjct: 440 STDSRLLVSSSQDTTLKVWDVRSKKM 465
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 231 (86.4 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 97/360 (26%), Positives = 150/360 (41%)
Query: 27 RFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSD 86
R TG GD+ RIW D TQ + TL+ H+ V CV W+ G IA+GS
Sbjct: 158 RMVTGAGDNTARIW-----------DCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSM 206
Query: 87 DQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSI------- 139
D I + + K G G+ LRGH+ + L+W P +
Sbjct: 207 DNTIRLWDPKSGQCL-----GD-----------ALRGHSKWITSLSWEPIHLVKPGSKPR 250
Query: 140 LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDW 199
LAS S D TI IW+ + +C + GH++ V V W G + S S D+TV +W +
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQ 309
Query: 200 SLAH---RTDGHWAK--SLGSTFFRRLG-WSPCGHFITTTHGFQKPRHSAPVLERGEWAA 253
++ HW SL + + R+G + G +T QK LE E
Sbjct: 310 GRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKK-----ALENYEKIC 364
Query: 254 TFDFLGHNAPIIVVKFN-HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIG 312
+ G++ ++V + ++MF N S + A G + + Y V A
Sbjct: 365 KKN--GNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSA-- 420
Query: 313 SQDRTITVWTTASPRPLFVAK-HFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKEL 371
S D +I +W + F++ SV ++WS D L +CS D T+ + ++L
Sbjct: 421 SFDNSIKLWDGRDGK--FISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKL 478
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D + K T RGH A V + WS D +L S S D T+ +W++ T + L GH V
Sbjct: 430 DGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEV 489
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
V W G + S DK V +W
Sbjct: 490 YTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 38/122 (31%), Positives = 56/122 (45%)
Query: 121 LRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+ GH + ++ ++P S + +G+ DNT IW+ T L+GH + V V+W P G
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 180 SFIASQSDDKTVIIWRT-SDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
IA+ S D T+ +W S L GH S + L W P H + G K
Sbjct: 199 EVIATGSMDNTIRLWDPKSGQCLGDALRGH------SKWITSLSWEPI-HLVKP--G-SK 248
Query: 239 PR 240
PR
Sbjct: 249 PR 250
Score = 121 (47.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+++ K + GH V + +SPD + S S DN+I +W+ G + RGH + V
Sbjct: 389 LKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVY 448
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
VAW + S S D T+ +W L+ GH
Sbjct: 449 QVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGH 485
Score = 49 (22.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKS 44
+ + P ATG D+ +R+W+ KS
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLWDPKS 217
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 232 (86.7 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 85/298 (28%), Positives = 130/298 (43%)
Query: 104 FGSGEP------PDIEN-WKVAM-TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS 155
FG EP PD+ N W + L GH A V+ +++S D +LAS S D T+ IW+
Sbjct: 267 FGKEEPNWIETKPDVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTE 326
Query: 156 TGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSL 213
TG L GHS LV+ V + +AS SD TV IW T SL H +GH W +S+
Sbjct: 327 TGSLQHTLEGHSDLVRSVIFSHDSRLLASASDS-TVKIWDTGTGSLQHTLEGHRDWVRSV 385
Query: 214 GSTFFRRLGWSPCGHFITTTH--GFQKPRHSAPVLE-RGEWAATFDFLGHNAPIIVVKFN 270
+ +L S G +H+ LE +W + F H++ ++ +
Sbjct: 386 IFSHDSQLLASASDDSTVKIWDTGTGSLQHT---LEGHRDWVRSVIF-SHDSQLLASASD 441
Query: 271 HSMFR---RNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPR 327
S + + S Q W S I +S+ ++A S DRT+ +W T
Sbjct: 442 DSTVKIWDTGTGSLQHTLEGHRDWVR--SVIFSHDSR---LLASASDDRTVRIWDTEKGS 496
Query: 328 PLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLS-DAELDELK 384
+ + V +S+S D L + S D TV + E + L H DA ++ ++
Sbjct: 497 HKHTLEGH-SSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDATIEAMR 553
Score = 167 (63.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 58/211 (27%), Positives = 90/211 (42%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMK--SVGKNFENDESTQRLLATLRDH--- 65
HE + S+ + A+ D V+IW+ + S+ E R + D
Sbjct: 295 HEAA-VLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLL 353
Query: 66 -FGSVNCVR-W-AKHG--RYIASGSDD---QVILIHEKKPGSGTTEFGSGEPPDIENWKV 117
S + V+ W G ++ G D VI H+ + + ++ + + D +
Sbjct: 354 ASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 413
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
TL GH V + +S D +LAS S D+T+ IW+ TG L GH V+ V +
Sbjct: 414 QHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH 473
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS SDD+TV IW T S H +GH
Sbjct: 474 DSRLLASASDDRTVRIWDTEKGSHKHTLEGH 504
Score = 150 (57.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
VI H+ + + ++ + + D + TL GH V + +S D +LAS S D T
Sbjct: 427 VIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRT 486
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD 206
+ IW+ G L GHSSLV V++ +AS S+D+TV IW SL H D
Sbjct: 487 VRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFD 544
Score = 61 (26.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGS 99
L L H +V V ++ R +AS SDD+ + I + + GS
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGS 329
>CGD|CAL0000387 [details] [associations]
symbol:orf19.4295 species:5476 "Candida albicans" [GO:0000417
"HIR complex" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006336 "DNA replication-independent nucleosome
assembly" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 EMBL:AACQ01000021 EMBL:AACQ01000022
KO:K11293 RefSeq:XP_720603.1 RefSeq:XP_720731.1
ProteinModelPortal:Q5AGM0 STRING:Q5AGM0 GeneID:3637655
GeneID:3637740 KEGG:cal:CaO19.11771 KEGG:cal:CaO19.4295
CGD:CAL0065931 Uniprot:Q5AGM0
Length = 1017
Score = 221 (82.9 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 113/487 (23%), Positives = 208/487 (42%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSV---GKNFENDESTQ-RL-LATLRD- 64
H G I SIDV +GG D+K+ +WN+K + K S + RL L +L
Sbjct: 11 HNG-GIHSIDVNQDNTILVSGGTDNKIGVWNLKKLIELSKLVSTHNSPEVRLKLKSLEPK 69
Query: 65 -----HFGSVNCVRWAK--HGRYIASGSDDQVIL--IHEKKPGSGTTEFGSGEPPDIENW 115
H VN VR+ K + R+I+S + V +HE+ F S E ++
Sbjct: 70 QYITCHKSLVNVVRFFKGDNKRFISSDVNGNVFFHTLHEQPETKQLFPFKSIETSEVN-- 127
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKG 172
VVDL S D+ ++A + + ++++++ T++ + +
Sbjct: 128 -----------PVVDLTISADNRLIAWSTNNGKVYLYDVVKDTFQELTSICHEKPIIQRS 176
Query: 173 VAWDPIGSFIASQSDDKTVIIWRTS----DWS-------LAHRTDGHWAKSLGSTFFRRL 221
+A+DP +++ + DD + +++ S D S L ++ ++++ + ++R+
Sbjct: 177 IAFDPSNNYLITVGDDTQINVFQYSYEKDDTSTTTYKFRLIYKISKLFSQNPLNVRYKRI 236
Query: 222 GWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
WSP G+ ++ + ++ R E + L + V F SS
Sbjct: 237 SWSPDGNLVSIPTASKNQTMLISLISRSEKWTNIESLVGHDFACDVV----KFNPKIFSS 292
Query: 282 QEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVV 341
+E N TSK+ ++VIA G DRT+ +W T+ P+ V + ++
Sbjct: 293 KE---------NDTSKV-------HSVIASGGSDRTMAIWNTSKSTPITVLQDAVQGEIL 336
Query: 342 DLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELD---ELKRSRYGDVRGR---- 394
D++W+ DG SL C+ G + +FE ELG+ S ++ +L+ + + R
Sbjct: 337 DITWTTDGTSLLFCTSQGKLCIGNFEPNELGYTFSQETMERFVQLQNNLIEPMNFRYPHE 396
Query: 395 --LANLAETPAQLLLEAASAKETTTKKVVSDVQAIQAPVKSSV-NIGVTTKT-SEPQTDN 450
+ N + P L +A TTT S ++ K++ N+GV+ ++ S T
Sbjct: 397 QTVGNRKQLPPIEFLSQKNAISTTT----SSSNTVENDKKNAEDNVGVSNQSKSTTTTTT 452
Query: 451 GKKSGGV 457
GGV
Sbjct: 453 TTIKGGV 459
Score = 57 (25.1 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 636 GSTCMMKETEIACTRGSQTLWSDRITGKVTVLAGNINFWAVGCEDGCL 683
GS K + + + + +W D I + + NFWAV DG +
Sbjct: 662 GSGNESKPSRLTYMKKDKEIWCDFIPKYIQLATEGSNFWAVTTVDGTI 709
Score = 47 (21.6 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 597 ATTTTLSIRVF-DKKEGEDNVPVCLEAR 623
+TTT+ S V DKK EDNV V +++
Sbjct: 418 STTTSSSNTVENDKKNAEDNVGVSNQSK 445
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 185 (70.2 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 40/120 (33%), Positives = 68/120 (56%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E+ K+ TL+GH V ++++P +++ SGS D + IW+++TG CT ++ HS V
Sbjct: 116 DVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPV 175
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
GV ++ G+ + S S D TV IW T+ L + K + +F + +SP G F+
Sbjct: 176 TGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEV--SFVK---FSPNGKFV 230
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 37/108 (34%), Positives = 48/108 (44%)
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
P N+ + TL+GH + + +SPD LAS S D TI IW G L GH
Sbjct: 31 PQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEG 90
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTF 217
+ +AW I S SDDKT+ IW + GH G +F
Sbjct: 91 ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSF 138
Score = 159 (61.0 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K TL GH + D+ WS D ++ S S D TI IW++ +G L+GH V GV++
Sbjct: 79 KFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSF 138
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFR 219
+P + I S S D+ V IW + H G F R
Sbjct: 139 NPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNR 182
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 53/209 (25%), Positives = 86/209 (41%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
L+GH + V + P G ++AS S DKT+ IW D +GH + + +
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGH-KEGISD-----IA 95
Query: 223 WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN-HSMFRRNSASS 281
WS I + K V E G+ T GH + V FN S + +
Sbjct: 96 WSQDSKLICSASD-DKTIKIWDV-ESGKMVKTLK--GHKEYVFGVSFNPQSNLIVSGSFD 151
Query: 282 QEVKAAPVGWTNGTSKIGGKESQP-----YN----VIAIGSQDRTITVWTTASPRPLFVA 332
+ V+ V T +K+ S P +N ++ GS D T+ +W T + + L
Sbjct: 152 ENVRIWDVN-TGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTI 210
Query: 333 KHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ V + +SP+G + A +LD T+
Sbjct: 211 STEDGKEVSFVKFSPNGKFVLAGTLDNTL 239
Score = 75 (31.5 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
I S+ P A+ D ++IW GK FE TL H ++ + W+
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYD-GK-FER---------TLEGHKEGISDIAWS 97
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ + I S SDD+ I I + + G
Sbjct: 98 QDSKLICSASDDKTIKIWDVESG 120
Score = 64 (27.6 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
TL+ H S++ V+++ G+++AS S D+ I I
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKI 72
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 218 (81.8 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 68/230 (29%), Positives = 105/230 (45%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
I ++ P A+G D +++W+ S G L TL H SV V ++
Sbjct: 44 IETVTFSPDGRLLASGSNDTTIKLWDPASGG-----------LKQTLEGHSSSVQSVAFS 92
Query: 76 KHGRYIASGSDDQVILIHEKKPGS--GTTEFGSGE------PPDIENWKVAM-----TLR 122
+G+ +ASGS D I + S T E S P+ + W A+ T+
Sbjct: 93 PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
Query: 123 GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
GH+ V+ + +SPD +LASGS + TI +W+ +T L GHS+ V + + P G +
Sbjct: 153 GHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLL 212
Query: 183 ASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
AS S+D T+ +W SL H +GH S L +SP G + +
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGH------SNKIESLAFSPNGQLLAS 256
Score = 209 (78.6 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 50/131 (38%), Positives = 72/131 (54%)
Query: 110 PDIE-NWKVAM-TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHS 167
P +E NW + TL GH+ + + +SPD +LASGS D TI +W+ ++G L GHS
Sbjct: 24 PKVEDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHS 83
Query: 168 SLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG--WSP 225
S V+ VA+ P G +AS S D T+ +W ++ SL H +GH + + S F G W+P
Sbjct: 84 SSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGH-SDRVESVAFSPNGQLWNP 142
Query: 226 C-GHFITTTHG 235
G T G
Sbjct: 143 AIGSLKHTIEG 153
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 60/198 (30%), Positives = 90/198 (45%)
Query: 18 SIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSV-N-CVRWA 75
S+ P A+G D +++WN S + + R+ + G + N +
Sbjct: 88 SVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSL 147
Query: 76 KHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM-----TLRGHTADVVD 130
KH G D V+ + P GS E I+ W A TL GH+ V+
Sbjct: 148 KH---TIEGHSDWVLSV-AFSPDGQLLASGSAEKT-IKLWDSATCGLKHTLGGHSNWVLP 202
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L +SPD +LASGS D TI +W+ +G L GHS+ ++ +A+ P G +AS S D T
Sbjct: 203 LVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDAT 262
Query: 191 VIIWRTSDWSLAHRTDGH 208
+ +W T+ S H GH
Sbjct: 263 IKLWDTATGSFRHTLKGH 280
Score = 165 (63.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 98 GSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG 157
GS +PP + + TL GH+ + L +SP+ +LASGS D TI +W+ +TG
Sbjct: 215 GSNDATIKLWDPP---SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATG 271
Query: 158 ICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAH--RTDG 207
L+GHS +V V + P + S S D T+ +W + L H RT G
Sbjct: 272 SFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTPG 323
Score = 164 (62.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 70/247 (28%), Positives = 104/247 (42%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
TL GH++ V + +SP+ +LASGS D TI +WN ++ + GHS V+ VA+ P G
Sbjct: 78 TLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Query: 180 SFIASQSDDKTVIIWRTSDW--SLAHRTDGHWAKSLGSTFFRRLGW--SPCGHFITTTHG 235
I SDW S+A DG S + +L W + CG + T G
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKL-WDSATCG--LKHTLG 194
Query: 236 FQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGT 295
HS W F + ++ N + + S +K G +N
Sbjct: 195 ----GHS-------NWVLPLVF-SPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSN-- 240
Query: 296 SKIGGKESQPYN-VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFA 354
KI P ++A GS D TI +W TA+ K + V+ + +SPD L +
Sbjct: 241 -KIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGH-SDMVLSVVFSPDSQLLES 298
Query: 355 CSLDGTV 361
S D T+
Sbjct: 299 GSGDNTI 305
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/173 (28%), Positives = 74/173 (42%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
L TL H + V ++ GR +ASGS+D I + + G G + G +++ VA
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASG-GLKQTLEGHSSSVQS--VA 90
Query: 119 MTLRGH-----TADVVDLNW-SPDDSI--LASGSLDNTIHI--------WNMSTGICTAV 162
+ G ++D W S DS+ G D + WN + G
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHT 150
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSL 213
+ GHS V VA+ P G +AS S +KT+ +W ++ L H GH W L
Sbjct: 151 IEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL 203
Score = 40 (19.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 340 VVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRL 375
V+ +++SPDG L + S + T+ + L H L
Sbjct: 158 VLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL 193
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 188 (71.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 53/184 (28%), Positives = 86/184 (46%)
Query: 30 TGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQV 89
+ G D +++W K ND+ + H S+ CV W+ G YIAS S D
Sbjct: 31 SSGEDRVIKLW-AKC------NDQLWGSSFSLPEAHKKSIRCVTWSPCGTYIASASFDGT 83
Query: 90 ILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTI 149
+ I + +E S P++E ++L GHT++V + W P ++A+ D ++
Sbjct: 84 VTIWK------ISEAHSA--PEME---ALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSV 132
Query: 150 HIWNMSTGI---CTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTS--DWSLAHR 204
+W C +VL+ HS VK VAW P G + S S D + ++R DW++ +
Sbjct: 133 WLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQ 192
Query: 205 TDGH 208
GH
Sbjct: 193 LSGH 196
Score = 154 (59.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 56/177 (31%), Positives = 74/177 (41%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIAS-GSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV 117
L +L H V CV W G IA+ G D V L EF E D++ V
Sbjct: 101 LVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWL----------WEFDDEE--DVQCVSV 148
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICT--AVLRGHSSLVKGVAW 175
L+ H+ DV + W P +L S S DN I+++ T A L GH S V +
Sbjct: 149 ---LQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEF 205
Query: 176 DPIGSFIASQSDDKTVIIW-------RTSDWSLAHRTDGHWAKSLGSTFFRRLGWSP 225
P G +AS SDD V +W ++S W G+ + T F L WSP
Sbjct: 206 SPSGDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTR----TIFD-LNWSP 257
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 50/189 (26%), Positives = 79/189 (41%)
Query: 23 PGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIA 82
P AT G D V +W F+++E Q ++ L+ H V V W HG +
Sbjct: 118 PSGHLIATCGRDKSVWLWE-------FDDEEDVQ-CVSVLQPHSQDVKSVAWHPHGEVLV 169
Query: 83 SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILAS 142
S S D I ++ + ++++W V L GH + V +SP ILAS
Sbjct: 170 STSYDNKINVYRE---------------ELDDWTVFAQLSGHDSTVWKAEFSPSGDILAS 214
Query: 143 GSLDNTIHIWNM-------STGICTAVLRG-HSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
S D + +W+ S+ +C A L G H+ + + W P +AS D + I+
Sbjct: 215 CSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDNRLCIY 274
Query: 195 RTSDWSLAH 203
+ L H
Sbjct: 275 KMPANGLTH 283
Score = 143 (55.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 47/167 (28%), Positives = 71/167 (42%)
Query: 115 WKVAMTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICT----AV--LRGHS 167
W + +L H + + WSP + +AS S D T+ IW +S A+ L GH+
Sbjct: 49 WGSSFSLPEAHKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHT 108
Query: 168 SLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLG--STFFRRLGWSP 225
S VK VAW P G IA+ DK+V +W D D L S + + W P
Sbjct: 109 SEVKCVAWCPSGHLIATCGRDKSVWLWEFDD-----EEDVQCVSVLQPHSQDVKSVAWHP 163
Query: 226 CGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS 272
G + +T K L+ +W GH++ + +F+ S
Sbjct: 164 HGEVLVSTSYDNKINVYREELD--DWTVFAQLSGHDSTVWKAEFSPS 208
Score = 136 (52.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIW----NMSTGICTAVLRGHSSL 169
N + L+ + L+W+ S+L S D I +W + G ++ H
Sbjct: 3 NVREVQKLKASNKRLWSLSWNHKGSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKS 62
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHF 229
++ V W P G++IAS S D TV IW+ S+ A + + ++ + + W P GH
Sbjct: 63 IRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHL 122
Query: 230 ITT 232
I T
Sbjct: 123 IAT 125
Score = 70 (29.7 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 307 NVIAIGSQDRTITVWT-------TASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG 359
+++A S D + +W+ ++S + + T+++ DL+WSPD L +C D
Sbjct: 210 DILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDN 269
Query: 360 TVANFHFEVKELGH 373
+ + L H
Sbjct: 270 RLCIYKMPANGLTH 283
>UNIPROTKB|H9L0T1 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0071817 "MMXD complex" evidence=IEA] [GO:0097361 "CIA complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104486 OMA:EEEYECV EMBL:AADN02064069
ProteinModelPortal:H9L0T1 Ensembl:ENSGALT00000028398 Uniprot:H9L0T1
Length = 225
Score = 170 (64.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 36/87 (41%), Positives = 50/87 (57%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGHSS 168
D E ++ L HT DV + W P+ +LAS S D+T+ +++ +C A L GH S
Sbjct: 19 DEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDTVKLYHEEEDDWVCCATLEGHES 78
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWR 195
V VA+D G +AS SDDKTV IW+
Sbjct: 79 TVWSVAFDGSGERLASCSDDKTVRIWQ 105
Score = 140 (54.3 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE-KKPGSGTTEFG 105
K + +E ATL H +V V + G +AS SDD+ + I + +PG+
Sbjct: 58 KLYHEEEDDWVCCATLEGHESTVWSVAFDGSGERLASCSDDKTVRIWQCYRPGNEEGVAC 117
Query: 106 SGEPPDIENWKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGIC----- 159
SG P WK L G HT + D++W LA+ D+ I ++ ST
Sbjct: 118 SGTDP---TWKCVCNLSGYHTRTIYDVSWCRLTGALATACGDDAIRVFEESTSSSPQQQQ 174
Query: 160 -------TA-VLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWR 195
TA V R HS V VAW+P +AS SDD + W+
Sbjct: 175 QQPTFSLTAHVPRAHSQDVNCVAWNPKEPGLLASCSDDGEIAFWK 219
Score = 49 (22.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 337 TQSVVDLSWSPDGYSLFA-CSLDGTVANFHFEVKE 370
+Q V ++W+P L A CS DG +A + ++ E
Sbjct: 190 SQDVNCVAWNPKEPGLLASCSDDGEIAFWKYQQPE 224
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 223 (83.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 75/267 (28%), Positives = 115/267 (43%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
++ TL GH+ V L +SPD +LASGS DNTI +W+ +TG GH + VA+
Sbjct: 783 ELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAF 842
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHG 235
P G +AS SDD T+ IW + L D H ++S+ S F G + +T
Sbjct: 843 APDGKELASASDDSTIKIWDLATGELQQTLDSH-SQSVRSVAFSPDGKLLASSSLDSTIK 901
Query: 236 FQKPRHSA--PVLE-RGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWT 292
P LE R W + F + +++ N A+ + ++ G +
Sbjct: 902 VWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHS 960
Query: 293 NGTSKIGGKESQPYNVIAIGSQDRTITVW--TTASPRPLFVAKHFFTQSVVDLSWSPDGY 350
+ S +A S D TI +W TT + F + ++V ++SPDG
Sbjct: 961 QSVRSVAF--SPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAV---AFSPDGK 1015
Query: 351 SLFACSLDGTVANFHFEVKELGHRLSD 377
L + S D T+ + EL L D
Sbjct: 1016 HLVSGSDDNTIKLWDLATSELQQSLED 1042
Score = 212 (79.7 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 80/263 (30%), Positives = 119/263 (45%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ ++ TL H+ V + +SPD +LAS SLD+TI +WN +TG L G S V
Sbjct: 862 DLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWV 921
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
K VA+ P G +AS S+ TV +W + L +GH ++S+ S F G
Sbjct: 922 KSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGH-SQSVRSVAFSPDGKQLASSSS 980
Query: 231 TTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVG 290
TT K +S GE TF GH+ I V F+ ++ S + +
Sbjct: 981 DTTI---KLWNSTT----GELQQTFK--GHDLWIRAVAFSPD--GKHLVSGSDDNTIKL- 1028
Query: 291 WTNGTSKIGGK-ESQPYNVIAIG-----------SQDRTITVWTTASPRPLFVAKHFFTQ 338
W TS++ E +V A+ S D TI +W +A+ L +Q
Sbjct: 1029 WDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGE-LQRTLEGHSQ 1087
Query: 339 SVVDLSWSPDGYSLFACSLDGTV 361
V +++SPDG L + S DGT+
Sbjct: 1088 GVRSVTFSPDGKLLASNSYDGTI 1110
Score = 209 (78.6 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 77/282 (27%), Positives = 123/282 (43%)
Query: 105 GSGEPPDIEN-WKVAM-TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAV 162
G + P +E W TL H V + +SPD L SGS D+T+ IW+ +TG
Sbjct: 728 GWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQT 787
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
L GHS V+ +A+ P G +AS S D T+ +W ++ L +GH S+ S F
Sbjct: 788 LDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGH-PHSIWSVAF---- 842
Query: 223 WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN-HSMFRRNSASS 281
+P G + + + L GE T D H+ + V F+ +S+
Sbjct: 843 -APDGKELASASDDSTIKIWD--LATGELQQTLD--SHSQSVRSVAFSPDGKLLASSSLD 897
Query: 282 QEVKAAPVGWTNGTSKI--------GGKESQPYNV----IAIGSQDRTITVWTTASPRPL 329
+K W T ++ G +S ++ +A GS+ T+ +W A+ L
Sbjct: 898 STIKV----WNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGE-L 952
Query: 330 FVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKEL 371
+QSV +++SPDG L + S D T+ ++ EL
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGEL 994
Score = 178 (67.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 70/267 (26%), Positives = 110/267 (41%)
Query: 18 SIDVQPGALRFATGGGDHKVRIWNMKS--VGKNFENDESTQRLLATLRD--HF--GSV-N 70
S+ P + A+ D +++WN + + + F+ + R +A D H GS N
Sbjct: 965 SVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDN 1024
Query: 71 CVR-WAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM-----TLRG 123
++ W + +D +H + S I+ W A TL G
Sbjct: 1025 TIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEG 1084
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIA 183
H+ V + +SPD +LAS S D TI +WN TG L G S V VA+ P G +A
Sbjct: 1085 HSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLA 1144
Query: 184 SQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSA 243
S D T+ +W ++ L +GH + + S F SP G + + Q +
Sbjct: 1145 SGYYDSTIKLWDSATGELLQTLEGH-SDRIQSVVF-----SPDGKLLASGSYDQTAKLWD 1198
Query: 244 PVLERGEWAATFDFLGHNAPIIVVKFN 270
P GE F+ GH+ + V F+
Sbjct: 1199 PAT--GELLQIFE--GHSKWVESVAFS 1221
Score = 177 (67.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 61/230 (26%), Positives = 102/230 (44%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
H+ + I ++ P +G D+ +++W++ +T L +L DH SV+
Sbjct: 1001 HD-LWIRAVAFSPDGKHLVSGSDDNTIKLWDL-----------ATSELQQSLEDHSRSVH 1048
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGS-GTTEFGSGE-------PPD----------- 111
V ++ + +AS S D I + + G T G + PD
Sbjct: 1049 AVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDG 1108
Query: 112 -IENW-----KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRG 165
I+ W ++ TL G + V + +SPD LASG D+TI +W+ +TG L G
Sbjct: 1109 TIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEG 1168
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSL 213
HS ++ V + P G +AS S D+T +W + L +GH W +S+
Sbjct: 1169 HSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESV 1218
Score = 173 (66.0 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 64/267 (23%), Positives = 118/267 (44%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
++ T +GH + + +SPD L SGS DNTI +W+++T L HS V VA+
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAF 1052
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHG 235
P +AS S D T+ +W ++ L +GH ++ + S F G + T
Sbjct: 1053 SPDDKQLASSSLDSTIKLWDSATGELQRTLEGH-SQGVRSVTFSPDGKLLASNSYDGTIK 1111
Query: 236 FQKP---RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWT 292
P + R +W + F + ++ ++ +SA+ + ++ G +
Sbjct: 1112 LWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLE-GHS 1170
Query: 293 NGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSL 352
+ + S ++A GS D+T +W A+ L + + ++ V +++SPDG L
Sbjct: 1171 DRIQSV--VFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGH-SKWVESVAFSPDGKLL 1227
Query: 353 FACSLDGTVANFHFEVKELGHRLSDAE 379
+ S T+ + EL L+D +
Sbjct: 1228 ASSSYGETIKLWDPVTGELLQTLNDPD 1254
Score = 160 (61.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D ++ TL GH+ + + +SPD +LASGS D T +W+ +TG + GHS V
Sbjct: 1156 DSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWV 1215
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+ VA+ P G +AS S +T+ +W
Sbjct: 1216 ESVAFSPDGKLLASSSYGETIKLW 1239
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 156 (60.0 bits), Expect = 8.9e-14, Sum P(3) = 8.9e-14
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
L GH V +SPD ++AS S D++I +W+++ C VL+GH V+ V++ P
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS-PCGHFITTTHGFQKP 239
+AS DK I+W H GH S+ S+ F S G + +T H +
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRVHLLVGH-CDSIQSSDFSPTSDSLATGSWDSTVHIWDL- 181
Query: 240 RHSAPVL 246
R S PV+
Sbjct: 182 RASTPVV 188
Score = 131 (51.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/152 (25%), Positives = 67/152 (44%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ K L+GH V +++SPD LASG D +W + +G +L GH +
Sbjct: 96 DVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSI 155
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW--RTSDWSLA-HRTDGHWAKSLGSTFFRRLGWSPCG 227
+ + P +A+ S D TV IW R S ++ H +GH ++ + G G
Sbjct: 156 QSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG-NISCLCYSASGLLASG 214
Query: 228 HFITTTHGFQKPRHSAPVLERGE--WAATFDF 257
+ T ++ ++ P+ +G W + F
Sbjct: 215 SWDKTICVWKPTTNNLPLQLKGHTIWVNSLAF 246
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 54/203 (26%), Positives = 84/203 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNM-KS----VGKNFENDESTQRLLAT---L 62
H G + S P A+ DH +R+W++ +S V K + T L
Sbjct: 67 HRG-PVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQL 125
Query: 63 RDHFGSVNCVRW-AKHGR--YIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV-A 118
+ W + GR ++ G D I + P S + GS + + W + A
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVGHCDS-IQSSDFSPTSDSLATGSWDST-VHIWDLRA 183
Query: 119 MT-------LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
T L GHT ++ L +S +LASGS D TI +W +T L+GH+ V
Sbjct: 184 STPVVSYHNLEGHTGNISCLCYSAS-GLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVN 242
Query: 172 GVAWDPIGSFIASQSDDKTVIIW 194
+A+ P +AS +TV +W
Sbjct: 243 SLAFSPDELKLASAGYSRTVKVW 265
Score = 115 (45.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIA 183
H +V +SPD L + S D +++W +G L GH VK + P G IA
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 184 SQSDDKTVIIWRTSDWSLAHRTDGH 208
S S D ++ +W + H GH
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGH 109
Score = 106 (42.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
+ L+GHT V L +SPD+ LAS T+ +W+ TG C L+G + + P
Sbjct: 232 LQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPD 291
Query: 179 GSFIAS 184
G + S
Sbjct: 292 GKLLVS 297
Score = 68 (29.0 bits), Expect = 8.9e-14, Sum P(3) = 8.9e-14
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 308 VIAIGSQDRTITVWT-TASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
++A GS D+TI VW T + PL + H T V L++SPD L + TV
Sbjct: 210 LLASGSWDKTICVWKPTTNNLPLQLKGH--TIWVNSLAFSPDELKLASAGYSRTV 262
Score = 63 (27.2 bits), Expect = 8.9e-14, Sum P(3) = 8.9e-14
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 65 HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
H G VNC ++ GR + + SDD + + K G
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSG 58
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 174 (66.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
++ K+A TL+GHT V N++P S++ SGS D ++ IW++ TG+C L HS V
Sbjct: 149 EVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPV 208
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSD 198
V+++ GS I S S D V IW T++
Sbjct: 209 SAVSFNRDGSLITSGSYDGLVRIWDTAN 236
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 33/94 (35%), Positives = 45/94 (47%)
Query: 115 WKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
+K+ T+ GHT + + +SP L + S D T+ IWNMS C L GH V A
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
W I + SDDKT+ I+ +A GH
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGH 162
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 50/214 (23%), Positives = 90/214 (42%)
Query: 161 AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRR 220
+ + GH+ + V + P G F+ + S DKTV IW SD S GH LG F
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGH---KLGVNDF-- 127
Query: 221 LGWSPCGHFITTTHGFQKPR-HSAPVLE-----RGEWAATF--DFLGHNAPIIVVKFNHS 272
WS I T + + + P ++ +G F +F ++ ++ F+ S
Sbjct: 128 -AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDES 186
Query: 273 MFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVA 332
+ + + VK P ++ S + ++I GS D + +W TA+ + +
Sbjct: 187 VRIWDVRTGMCVKTLPAH-SDPVSAVSFNRDG--SLITSGSYDGLVRIWDTANGQCVKTL 243
Query: 333 KHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
V + +SP+G + + +LD T+ + F
Sbjct: 244 VDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF 277
Score = 116 (45.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
TL GH V D WS D + + S D T+ I+ + T L+GH++ V ++P
Sbjct: 116 TLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS 175
Query: 180 SFIASQSDDKTVIIW 194
S + S S D++V IW
Sbjct: 176 SLVVSGSFDESVRIW 190
Score = 115 (45.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVL-RGHSSL 169
D+ TL H+ V ++++ D S++ SGS D + IW+ + G C L +
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPP 250
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
V V + P G +I S + D T+ +W + GH
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGH 289
Score = 78 (32.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
I ++ P T D V+IWNM +D S +R TL H VN W+
Sbjct: 82 ISAVKFSPCGKFLGTSSADKTVKIWNM--------SDLSCER---TLTGHKLGVNDFAWS 130
Query: 76 KHGRYIASGSDDQVILIHE 94
+ I + SDD+ + I+E
Sbjct: 131 ADSKSIVTASDDKTLKIYE 149
Score = 59 (25.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 9/36 (25%), Positives = 24/36 (66%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
+L++T+ H S++ V+++ G+++ + S D+ + I
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKI 105
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 55 TQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
T ++ TL+ H V C + + SGS D+ + I + + G
Sbjct: 152 TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTG 195
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 207 (77.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 52/152 (34%), Positives = 73/152 (48%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + E +
Sbjct: 346 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRK---EIYT 402
Query: 117 VAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
+ + G T +P+ SI LAS S D+T+ +W+M G+CT LR H V VA+
Sbjct: 403 IKWSPTGPTTS------NPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAF 456
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T SL H G
Sbjct: 457 SPDGKYLASGSFDKCVHIWNTQSGSLVHSYQG 488
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 68/255 (26%), Positives = 110/255 (43%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTA----VLR------GH- 166
A LRGH ++V W+P +LASGS D+T IWN++ A VLR GH
Sbjct: 168 ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHD 227
Query: 167 ---SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A+ S D IW T + +LA H K G F L W
Sbjct: 228 VPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TENGNLASTLGQH--K--GPIF--ALKW 280
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G++I + G K GE F F H+AP + V + ++ + ++
Sbjct: 281 NKKGNYILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNTTFASCSTDMC 336
Query: 284 VKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPLF-VAKH 334
+ PV G T+++ + P ++ A S D T+ +W+ + + H
Sbjct: 337 IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAH 396
Query: 335 FFTQSVVDLSWSPDG 349
+ + + WSP G
Sbjct: 397 --RKEIYTIKWSPTG 409
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 80/329 (24%), Positives = 123/329 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTL 121
LR H V W +ASGS D I E GS + + +
Sbjct: 171 LRGHESEVFICAWNPVSDLLASGSGDSTARIWN------LNENGSRASTQLV-LRHCIRE 223
Query: 122 RGHTA----DVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
GH DV L+W+ D ++LA+GS D IW G + L H + + W+
Sbjct: 224 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNK 282
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITT 232
G++I S DKT IIW + H A +L +T F C H
Sbjct: 283 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRL 342
Query: 233 THGFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAA 287
G +P H+ V +W + L + + +K SM + + +
Sbjct: 343 --GCDRPVKTFQGHTNEV-NAIKWDPSGMLLASCSDDMTLKI-WSMKQDACVHNLQAHRK 398
Query: 288 PVGWTNGTSKIGGKESQPYNVIAIGSQ--DRTITVWTTASPRPLF-VAKHFFTQSVVDLS 344
+ +T S G S P + I + S D T+ +W + KH + V ++
Sbjct: 399 EI-YTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKH--QEPVYSVA 455
Query: 345 WSPDGYSLFACSLDGTVANFHFEVKELGH 373
+SPDG L + S D V ++ + L H
Sbjct: 456 FSPDGKYLASGSFDKCVHIWNTQSGSLVH 484
Score = 117 (46.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 48/185 (25%), Positives = 71/185 (38%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ G STQ +L +
Sbjct: 174 HES-EVFICAWNPVSDLLASGSGDSTARIWNLNENGSR----ASTQLVLR---------H 219
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + T + EN +A TL H +
Sbjct: 220 CIREGGHD--VPSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLASTLGQHKGPIFA 277
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 278 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMC 336
Query: 191 VIIWR 195
+ + R
Sbjct: 337 IHVCR 341
Score = 63 (27.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 463 LASGSFDKCVHIWNTQSGS--LVHSYQGTGGIFEVCWNAQGDKVGASASDGSV 513
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 169 (64.5 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 102 TEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTA 161
++ GS D+E K+ TL GH A++ L++ P +ASGS D I +W++ C
Sbjct: 82 SQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF 141
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
RGHS V+ + + P G ++AS +DD TV +W + + GH
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Score = 155 (59.6 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 41/163 (25%), Positives = 73/163 (44%)
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
M+L GHT+ V + + + ++ +GS +I +W++ L GH + + + + P
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY 116
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
G F+AS S D + +W R GH S R L +SP G ++ +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGH------SQAVRCLRFSPDGKWLASA----A 166
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
H+ + + +F GH P+ VV+F+ + + S SS
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Score = 107 (42.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DI RGH+ V L +SPD LAS + D+T+ +W+++ G + GH+ V
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 171 KGVAWDPIGSFIASQSDD 188
V + P +AS S D
Sbjct: 193 NVVEFHPNEYLLASGSSD 210
Score = 56 (24.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDD 87
D ++L TL H ++ + + +G ++ASGS D
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 126
Score = 39 (18.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 65 HFGSVNCVRWAK-HGRYIASGSDD-QVILIHEKKP 97
H +V+ + K GR +A+G DD +V L KP
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP 53
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 169 (64.5 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 102 TEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTA 161
++ GS D+E K+ TL GH A++ L++ P +ASGS D I +W++ C
Sbjct: 86 SQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF 145
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
RGHS V+ + + P G ++AS +DD TV +W + + GH
Sbjct: 146 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 192
Score = 149 (57.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
M+L GHT+ V + + + ++ +GS +I +W++ L GH + + + + P
Sbjct: 61 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY 120
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
G F+AS S D + +W R GH S R L +SP G ++ +
Sbjct: 121 GEFVASGSQDTNIKLWDIRRKGCVFRYRGH------SQAVRCLRFSPDGKWLASA----A 170
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFN 270
H+ + + +F GH P+ VV+F+
Sbjct: 171 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 202
Score = 39 (18.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 65 HFGSVNCVRWAK-HGRYIASGSDD-QVILIHEKKP 97
H +V+ + K GR +A+G DD +V L KP
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP 57
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 193 (73.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 74/243 (30%), Positives = 101/243 (41%)
Query: 37 VRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKK 96
+RIW KN ++D+ T + + T H ++ V W+ G Y+AS S D I I KK
Sbjct: 22 IRIW-----AKNSDSDQWTCKSILT-EGHTRTIRSVAWSPCGNYLASCSFDATICIWSKK 75
Query: 97 PGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM-- 154
G D E TL GH +V +NWS LAS S D + IW
Sbjct: 76 DG------------DFE---CMATLEGHENEVKCVNWSSSGVYLASCSRDKSAWIWEFIE 120
Query: 155 --STGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRT--SDWSLAHRTDGHWA 210
C +VL HS VK V W P + + S S D T+ I++ DW +H GH
Sbjct: 121 EDEEYECASVLTDHSQDVKHVVWSPKENALVSASYDNTIKIYKEVDDDWECSHTLIGH-E 179
Query: 211 KSLGSTFFRRLG--WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVV 267
++ S F G + CG K S P +W + G HN PI V
Sbjct: 180 STVWSLSFHSSGELFVSCGD--DKVLKIWKCLKSGP--SDVKWISICTIAGYHNRPIYDV 235
Query: 268 KFN 270
++
Sbjct: 236 DWS 238
Score = 156 (60.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 48/169 (28%), Positives = 73/169 (43%)
Query: 111 DIENWKVAMTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHS 167
D + W L GHT + + WSP + LAS S D TI IW+ G C A L GH
Sbjct: 30 DSDQWTCKSILTEGHTRTIRSVAWSPCGNYLASCSFDATICIWSKKDGDFECMATLEGHE 89
Query: 168 SLVKGVAWDPIGSFIASQSDDKTVIIWR----TSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ VK V W G ++AS S DK+ IW ++ A H S + + W
Sbjct: 90 NEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDH------SQDVKHVVW 143
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS 272
SP + + + + V + +W + +GH + + + F+ S
Sbjct: 144 SPKENALVSASYDNTIKIYKEVDD--DWECSHTLIGHESTVWSLSFHSS 190
Score = 46 (21.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 307 NVIAIGSQDRTITVWTTAS 325
N++A GS D I +W S
Sbjct: 293 NILASGSDDNCIKIWKVHS 311
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 191 (72.3 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 62/217 (28%), Positives = 95/217 (43%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
H + + + P A+ GGD +RIW GK+ +N + +L H +V
Sbjct: 14 HPDSRCWFLAWNPSGTLLASCGGDRTIRIW-----GKDGDN-WVCKSVLG--EGHQRTVR 65
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
V W+ G Y+AS S D I KK E ++ TL GH +V
Sbjct: 66 KVSWSPCGNYLASASFDATTCIWMKKK---------------EEFECITTLEGHENEVKS 110
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
+ W+P S+LA+ S D ++ +W + C +VL H+ VK V W P +AS S
Sbjct: 111 VAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASY 170
Query: 188 DKTVIIWRTS--DWSLAHRTDGHWAKSLGSTFFRRLG 222
D +V ++R DW +GH ++ S F + G
Sbjct: 171 DDSVKLYREEEDDWVCCATLEGH-TSTVWSLAFDQTG 206
Score = 183 (69.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 47/154 (30%), Positives = 73/154 (47%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ TL H V V WA G +A+ S D+ + + E + E ++
Sbjct: 98 ITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVD--------------EEEEYECV 143
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGHSSLVKGVAWD 176
L HT DV + W P+ +LAS S D+++ ++ +C A L GH+S V +A+D
Sbjct: 144 SVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFD 203
Query: 177 PIGSFIASQSDDKTVIIWRT-SDWSLAHRTDGHW 209
G +A+ SDDKTV IWR ++D +W
Sbjct: 204 QTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNW 237
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/160 (31%), Positives = 73/160 (45%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGS 106
K + +E ATL H +V + + + G +A+ SDD+ + I + GT E GS
Sbjct: 175 KLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQL---GTGEQGS 231
Query: 107 GEPPDIENWKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI------- 158
P NWK TL G HT V D+NW+ +A+ D+ + I+ G
Sbjct: 232 KSDP---NWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVRIFEEDPGSDPLQPTF 288
Query: 159 -CTAVL-RGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWR 195
TA + R H+ V V W P + +AS SDD + WR
Sbjct: 289 SLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFWR 328
Score = 149 (57.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 131 LNWSPDDSILASGSLDNTIHIWNMS--TGICTAVL-RGHSSLVKGVAWDPIGSFIASQSD 187
L W+P ++LAS D TI IW +C +VL GH V+ V+W P G+++AS S
Sbjct: 22 LAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASF 81
Query: 188 DKTVIIW--RTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
D T IW + ++ +GH + + W+P G + T
Sbjct: 82 DATTCIWMKKKEEFECITTLEGH------ENEVKSVAWAPSGSLLAT 122
Score = 50 (22.7 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 307 NVIAIGSQDRTITVWTTASPRPLFVAK--HFFTQSVVDLSWSPDGYSLFACSLDGTVANF 364
+++A S+D+++ VW + TQ V + W P+ L + S D +V +
Sbjct: 118 SLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLY 177
Query: 365 HFE 367
E
Sbjct: 178 REE 180
Score = 42 (19.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 592 SGSVAATTTTLSIRVFDKKEGEDNV-PV-CLEAR-PREH 627
+G++A ++R+F++ G D + P L A PR H
Sbjct: 260 TGAIATACGDDAVRIFEEDPGSDPLQPTFSLTAHMPRAH 298
Score = 39 (18.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 337 TQSVVDLSWSPDGYSLFACSLDGTV 361
T +V L++ G L CS D TV
Sbjct: 194 TSTVWSLAFDQTGEQLATCSDDKTV 218
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 92/347 (26%), Positives = 147/347 (42%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +T+ T H V CV WA G+ +ASG I+I + P +G + G P
Sbjct: 147 DLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWD--PETGQQK---GRP-- 199
Query: 112 IENWKVAMTLRGHTADVVDLNWSP---DDSI--LASGSLDNTIHIWNMSTGICTAVLRGH 166
L GH + L W P D LAS S D IW++ G C + GH
Sbjct: 200 ---------LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGH 250
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSLG-ST-FFRRLG 222
++ V V W G I + S D+TV +WR +D L GH W ++ ST + R G
Sbjct: 251 TNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTG 309
Query: 223 -WSPC-----GHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRR 276
+ P H +T Q+ SA L+R + A D + ++ +++++
Sbjct: 310 PFHPVKDRSKSHLSLSTEELQE---SA--LKRYQ-AVCPDEV---ESLVSCSDDNTLYLW 360
Query: 277 NSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFF 336
+ ++ V+ G N + + K S +IA S D+++ +W AS
Sbjct: 361 RNNQNKCVERM-TGHQNVVNDV--KYSPDVKLIASASFDKSVRLWR-ASDGQYMATFRGH 416
Query: 337 TQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDEL 383
Q+V ++WS D + + S D T+ + + K+L L DE+
Sbjct: 417 VQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELP-GHADEV 462
Score = 159 (61.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 37/112 (33%), Positives = 50/112 (44%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K + GH V D+ +SPD ++AS S D ++ +W S G A RGH V VAW
Sbjct: 366 KCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAW 425
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
I S S D T+ +W LA GH + G + W+P G
Sbjct: 426 SADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFG------VDWAPDG 471
Score = 157 (60.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T RGH V + WS D ++ SGS D+T+ +W++ T L GH+ V GV W P G
Sbjct: 412 TFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDG 471
Query: 180 SFIASQSDDKTVIIW 194
S +AS DK + +W
Sbjct: 472 SRVASGGKDKVIKLW 486
Score = 144 (55.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
++ GH VV LN+SPD + LASGS D T+ +W+++T GH V V+W P G
Sbjct: 114 SMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDG 173
Query: 180 SFIASQSDDKTVIIW 194
+AS ++IIW
Sbjct: 174 KRLASGCKAGSIIIW 188
Score = 127 (49.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 58/211 (27%), Positives = 85/211 (40%)
Query: 23 PGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIA 82
P + A+ GD RIW++K +G+ L + H +V VRW G I
Sbjct: 219 PECRKLASASGDGDCRIWDVK-LGQ----------CLMNIAGHTNAVTAVRWGGAG-LIY 266
Query: 83 SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM--TLR-GHTADVVDLNWS----- 134
+ S D+ + + G F SG + N ++ LR G V D + S
Sbjct: 267 TSSKDRTVKMWRAADGILCRTF-SGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLS 325
Query: 135 ----------------PDD-SILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
PD+ L S S DNT+++W + C + GH ++V V + P
Sbjct: 326 TEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSP 385
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
IAS S DK+V +WR SD GH
Sbjct: 386 DVKLIASASFDKSVRLWRASDGQYMATFRGH 416
Score = 91 (37.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIW 152
++ K+A L GH +V ++W+PD S +ASG D I +W
Sbjct: 446 VQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 89 (36.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S++ P A+G GD VR+W++ + +F T H V CV WA
Sbjct: 122 VVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHF-----------TCTGHKQWVLCVSWA 170
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
G+ +ASG I+I + + G
Sbjct: 171 PDGKRLASGCKAGSIIIWDPETG 193
Score = 58 (25.5 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
+I GS+D T+ VW+ + + L V + W+PDG
Sbjct: 431 LIVSGSKDSTLKVWSVQTKK-LAQELPGHADEVFGVDWAPDG 471
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
R +++ H +V + ++ G ++ASGS D +
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTV 143
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 186 (70.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 46/139 (33%), Positives = 67/139 (48%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ TL H V V WA G +A+ S D+ + + E + + ++
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD--------------EEDEYECV 143
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGHSSLVKGVAWD 176
L HT DV + W P +LAS S D+T+ ++ +C A L GH S V +A+D
Sbjct: 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD 203
Query: 177 PIGSFIASQSDDKTVIIWR 195
P G +AS SDD+TV IWR
Sbjct: 204 PSGQRLASCSDDRTVRIWR 222
Score = 163 (62.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 44/149 (29%), Positives = 68/149 (45%)
Query: 65 HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGH 124
H +V V W+ G Y+AS S D I +K ++++ TL GH
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ---------------DDFECVTTLEGH 104
Query: 125 TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVAWDPIGSF 181
+V + W+P ++LA+ S D ++ +W + C +VL H+ VK V W P
Sbjct: 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164
Query: 182 IASQSDDKTVIIWRTS--DWSLAHRTDGH 208
+AS S D TV ++R DW +GH
Sbjct: 165 LASASYDDTVKLYREEEDDWVCCATLEGH 193
Score = 156 (60.0 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 57/213 (26%), Positives = 89/213 (41%)
Query: 131 LNWSPDDSILASGSLDNTIHIWNMS--TGICTAVL-RGHSSLVKGVAWDPIGSFIASQSD 187
L W+P ++LAS D I IW + IC +VL GH V+ VAW P G+++AS S
Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 188 DKTVIIWRTS--DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
D T IW+ + D+ +GH + + W+P G+ + T K V
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGH------ENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEV----KAAPVGWTNGTSKIGGK 301
E E+ H + V ++ S SAS + + W + + G
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC-CATLEGH 193
Query: 302 ESQPYNV--------IAIGSQDRTITVWTTASP 326
ES +++ +A S DRT+ +W P
Sbjct: 194 ESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226
Score = 153 (58.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 34/89 (38%), Positives = 45/89 (50%)
Query: 113 ENWKVAMTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTAVLRGHSSL 169
++W L GH V + WSP + LAS S D T IW N C L GH +
Sbjct: 48 DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE 107
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
VK VAW P G+ +A+ S DK+V +W +
Sbjct: 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDE 136
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/161 (30%), Positives = 72/161 (44%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI-HEKKPGSGTTEFG 105
K + +E ATL H +V + + G+ +AS SDD+ + I + PG+
Sbjct: 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234
Query: 106 SGEPPDIENWKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWN--------MST 156
SG P +WK TL G H+ + D+ W LA+ D+ I ++ T
Sbjct: 235 SGSDP---SWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPT 291
Query: 157 GICTAVL-RGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWR 195
TA L + HS V VAW+P +AS SDD V W+
Sbjct: 292 FSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332
Score = 49 (22.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 337 TQSVVDLSWSPDGYSLFA-CSLDGTVANFHFEVKE 370
+Q V ++W+P L A CS DG VA + ++ E
Sbjct: 303 SQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 166 (63.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
+I ++ TL+GH V N++P S++ SGS D ++ IW++ TG+C L HS V
Sbjct: 157 EIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPV 216
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSD 198
V+++ GS IAS S D V IW T++
Sbjct: 217 SAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Score = 163 (62.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+K+ TL GHT + +SP L + S D T+ IWNM IC L GH V +
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 174 AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
AW + S SDDKT+ I+ + GH
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGH 170
Score = 126 (49.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
TL GH V D+ WS D + S S D T+ I+ + T T L+GH++ V ++P
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 180 SFIASQSDDKTVIIW 194
S + S S D++V IW
Sbjct: 184 SLVVSGSFDESVRIW 198
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 158 ICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGST 216
+CT L GH+ + + P G ++ + S DKTV IW D + RT GH LG
Sbjct: 80 MCT--LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM-DHMICERTLTGH---KLG-- 131
Query: 217 FFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN-HSMFR 275
+ WS + + + + V R T GHN + FN S
Sbjct: 132 -VNDIAWSSDSRCVVSASDDKTLKIFEIVTSR----MTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 276 RNSASSQEVKAAPVGWTNGTSKIGGKESQP-----YN----VIAIGSQDRTITVWTTASP 326
+ + + V+ V T K S P +N +IA GS D + +W TA+
Sbjct: 187 VSGSFDESVRIWDVK-TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG 245
Query: 327 RPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
+ + V + +SP+G + A +LD T+ + F
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDF 285
Score = 118 (46.6 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVL-RGHSSL 169
D++ TL H+ V ++++ D S++ASGS D + IW+ + G C L +
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
V V + P G +I + + D T+ +W S + GH
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Score = 74 (31.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 24/79 (30%), Positives = 32/79 (40%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
I S P T D V+IWNM + +R TL H VN + W+
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHM--------ICER---TLTGHKLGVNDIAWS 138
Query: 76 KHGRYIASGSDDQVILIHE 94
R + S SDD+ + I E
Sbjct: 139 SDSRCVVSASDDKTLKIFE 157
Score = 60 (26.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 41 NMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
N + G + + + +L+ TL H S++ +++ G+Y+ + S D+ + I
Sbjct: 63 NPNAAGAS-ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKI 113
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 562 ITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTTTLSIRVFDKKEGE 613
+ + I+ +PA + V + G++ ASGS +R++D G+
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-----VRIWDTANGQ 246
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 166 (63.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
+I ++ TL+GH V N++P S++ SGS D ++ IW++ TG+C L HS V
Sbjct: 157 EIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPV 216
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSD 198
V+++ GS IAS S D V IW T++
Sbjct: 217 SAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Score = 163 (62.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+K+ TL GHT + +SP L + S D T+ IWNM IC L GH V +
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 174 AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
AW + S SDDKT+ I+ + GH
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGH 170
Score = 126 (49.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
TL GH V D+ WS D + S S D T+ I+ + T T L+GH++ V ++P
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 180 SFIASQSDDKTVIIW 194
S + S S D++V IW
Sbjct: 184 SLVVSGSFDESVRIW 198
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 158 ICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGST 216
+CT L GH+ + + P G ++ + S DKTV IW D + RT GH LG
Sbjct: 80 MCT--LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM-DHMICERTLTGH---KLG-- 131
Query: 217 FFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN-HSMFR 275
+ WS + + + + V R T GHN + FN S
Sbjct: 132 -VNDIAWSSDSRCVVSASDDKTLKIFEIVTSR----MTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 276 RNSASSQEVKAAPVGWTNGTSKIGGKESQP-----YN----VIAIGSQDRTITVWTTASP 326
+ + + V+ V T K S P +N +IA GS D + +W TA+
Sbjct: 187 VSGSFDESVRIWDVK-TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG 245
Query: 327 RPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
+ + V + +SP+G + A +LD T+ + F
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDF 285
Score = 118 (46.6 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVL-RGHSSL 169
D++ TL H+ V ++++ D S++ASGS D + IW+ + G C L +
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
V V + P G +I + + D T+ +W S + GH
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Score = 74 (31.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 24/79 (30%), Positives = 32/79 (40%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
I S P T D V+IWNM + +R TL H VN + W+
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHM--------ICER---TLTGHKLGVNDIAWS 138
Query: 76 KHGRYIASGSDDQVILIHE 94
R + S SDD+ + I E
Sbjct: 139 SDSRCVVSASDDKTLKIFE 157
Score = 60 (26.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 41 NMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
N + G + + + +L+ TL H S++ +++ G+Y+ + S D+ + I
Sbjct: 63 NPNAAGAS-ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKI 113
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 562 ITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTTTLSIRVFDKKEGE 613
+ + I+ +PA + V + G++ ASGS +R++D G+
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-----VRIWDTANGQ 246
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 201 (75.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 67/207 (32%), Positives = 94/207 (45%)
Query: 16 IFSIDV-QPGALRFATGGGDHKVRIWNMK-SVGKNFENDESTQRLLATLRDHFGSVNCVR 73
I SIDV + G++ FAT D VR+W M S G+ + T A GS+ C R
Sbjct: 389 ILSIDVFRKGSM-FATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAV-----GSIACSR 442
Query: 74 WAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNW 133
+ +++ SGS D + + + +G G + K T R H DV +
Sbjct: 443 MKQ--QFVVSGSQDCTVKVWDLPETTGA----EG----VMMMKARSTERAHEKDVNSVCV 492
Query: 134 SPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVII 193
SP+D +LASGS D T +W +S V RGH V V + P+ + S S D +V I
Sbjct: 493 SPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRI 552
Query: 194 WRTSDWSLAHRTDGHWAKSLGSTFFRR 220
W D+S +GH A L F R
Sbjct: 553 WSIQDFSCLKTFEGHDASVLKIIFVSR 579
Score = 103 (41.3 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 121 LRGHTADVVDLNWSPDDSILA--SGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
L+G + V + + PD S L S S D I IW++ + C VL H S V +A+ P
Sbjct: 144 LKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPD 203
Query: 179 GSFIASQSDDKTVIIW 194
G + S DK +W
Sbjct: 204 GHTLVSSGRDKICSVW 219
Score = 96 (38.9 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 123 GHTADVVDLNW-SPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF 181
G+ DV+D+ + DD+ +A + + + ++ +ST C +L GH+ + + GS
Sbjct: 342 GYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNSCQ-ILHGHTDTILSIDVFRKGSM 400
Query: 182 IASQSDDKTVIIWR 195
A+ + DK+V +WR
Sbjct: 401 FATCAKDKSVRVWR 414
Score = 96 (38.9 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM--STGI--CTAVLRGHSSLVKGVAWD 176
L GHT ++ ++ S+ A+ + D ++ +W M S+G C A GHS+ V +A
Sbjct: 382 LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACS 441
Query: 177 PIGS-FIASQSDDKTVIIW 194
+ F+ S S D TV +W
Sbjct: 442 RMKQQFVVSGSQDCTVKVW 460
Score = 69 (29.3 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
++A GSQDRT +W + R L V + + V + +SP L + S DG+V
Sbjct: 498 LLASGSQDRTAKLWALSDLRLLGVCRGH-RRGVWSVQFSPVDQILGSASADGSV 550
Score = 50 (22.7 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 26 LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
L+ + D +RIW+++S R + L H+ V + ++ G + S
Sbjct: 163 LQLFSSSSDCAIRIWDLRS-----------SRCVCVLESHYSPVTALAFSPDGHTLVSSG 211
Query: 86 DDQV 89
D++
Sbjct: 212 RDKI 215
Score = 47 (21.6 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 7 SWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNM 42
SW + + S+ + ATGG D +++W++
Sbjct: 100 SWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDV 135
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 196 (74.1 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 80/333 (24%), Positives = 147/333 (44%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D ST+ T + H V + W+ G+ +ASG + IL+ + P +GT
Sbjct: 144 DLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWD--PSTGT---------- 191
Query: 112 IENWKVAMTLRGHTADVVDLNW-----SPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
+V TL GH+ + L+W +P+ +AS S D ++ +W+ + G C +L GH
Sbjct: 192 ----QVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 247
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSLG-STFFR-RLG 222
+ V + W G + S S D+T+ +WR D L GH W ++ ST + R G
Sbjct: 248 TQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 306
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVL-ERGEWAATFDFLGHNAP--IIVVKFNHSMFRRNS 278
+ P T Q + S L ER ++ ++ + P ++ + ++F +
Sbjct: 307 AFEPA----EATVNAQDLQGSLKELKERA--SSRYNLVRGQGPERLVSGSDDFTLFLWSP 360
Query: 279 ASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQ 338
A ++ A G +++ S ++A S D++I +W + + L +
Sbjct: 361 AEDKKPLARMTGHQALINQV--LFSPDSRIVASASFDKSIKLWDGRTGKYL-ASLRGHVA 417
Query: 339 SVVDLSWSPDGYSLFACSLDGTVANFHFEVKEL 371
+V ++WS D L + S D T+ + + ++L
Sbjct: 418 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 450
Score = 165 (63.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH A V + WS D +L SGS D+T+ +W++ T L GH+ V V W
Sbjct: 407 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDW 466
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G +AS DK + IWR
Sbjct: 467 SPDGQRVASGGKDKCLRIWR 486
Score = 150 (57.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 41/134 (30%), Positives = 62/134 (46%)
Query: 99 SGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI 158
SG+ +F E+ K + GH A + + +SPD I+AS S D +I +W+ TG
Sbjct: 348 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 407
Query: 159 CTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
A LRGH + V +AW + S S D T+ +W L GH A + +
Sbjct: 408 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGH-ADEVYA--- 463
Query: 219 RRLGWSPCGHFITT 232
+ WSP G + +
Sbjct: 464 --VDWSPDGQRVAS 475
Score = 147 (56.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+L GH+ V+ + +SP LASGS D T+ W++ST +GH V ++W P G
Sbjct: 111 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 170
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGSTFFRRLGWSP 225
+AS + +++W S + RT GH S + L W P
Sbjct: 171 KKLASGCKNGQILLWDPSTGTQVGRTLTGH------SKWITGLSWEP 211
Score = 77 (32.2 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+G GD VR W++ + +F T + H V + W+
Sbjct: 119 VISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-----------TCKGHRHWVLSISWS 167
Query: 76 KHGRYIASGSDDQVILIHEKKPGSGT 101
G+ +ASG + IL+ + P +GT
Sbjct: 168 PDGKKLASGCKNGQILLWD--PSTGT 191
Score = 56 (24.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ GS D T+ VW + + L V + WSPDG
Sbjct: 430 LLVSGSSDSTLKVWDVKAQK-LTTDLPGHADEVYAVDWSPDG 470
Score = 50 (22.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 27/82 (32%), Positives = 36/82 (43%)
Query: 313 SQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELG 372
SQDRTI VW A L V ++ S D Y+L + + A + ++L
Sbjct: 266 SQDRTIKVWR-AHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVN--AQDLQ 321
Query: 373 HRLSDAELDELKRSRYGDVRGR 394
L EL E SRY VRG+
Sbjct: 322 GSLK--ELKERASSRYNLVRGQ 341
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 186 (70.5 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 58/213 (27%), Positives = 93/213 (43%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRD-HFGSV 69
H + + + P A+ GGD +RIW + G ++E L+D H +V
Sbjct: 14 HPDSRCWYVAWNPKGTLLASCGGDRTIRIWGRE--GDSWE-------CKTVLQDGHQRTV 64
Query: 70 NCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVV 129
V W+ G Y+AS S D I +KK ++++ L GH +V
Sbjct: 65 RKVAWSPCGNYLASASFDATTCIWKKKN---------------DDFECLTVLEGHENEVK 109
Query: 130 DLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVAWDPIGSFIASQS 186
+ W+P ++LA+ S D ++ IW + C +V+ H+ VK V W P +AS S
Sbjct: 110 CVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCS 169
Query: 187 DDKTVIIWRTSD--WSLAHRTDGHWAKSLGSTF 217
D V +++ D W +GH + G TF
Sbjct: 170 YDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF 202
Score = 181 (68.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 54/164 (32%), Positives = 73/164 (44%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEP 109
+ND+ L L H V CV WA G +A+ S D+ + I E
Sbjct: 91 KNDDF--ECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEV-------------- 134
Query: 110 PDIEN-WKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGH 166
D EN ++ + HT DV + W P +LAS S DN + ++ C A L GH
Sbjct: 135 -DEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGH 193
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHR-TDGHW 209
+S V G+ +DP G +AS SDD TV IW+ TD W
Sbjct: 194 TSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAW 237
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 66/255 (25%), Positives = 98/255 (38%)
Query: 133 WSPDDSILASGSLDNTIHIWNMS--TGICTAVLR-GHSSLVKGVAWDPIGSFIASQSDDK 189
W+P ++LAS D TI IW + C VL+ GH V+ VAW P G+++AS S D
Sbjct: 24 WNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 190 TVIIWR--TSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLE 247
T IW+ D+ +GH + + W+P G+ + T K V E
Sbjct: 84 TTCIWKKKNDDFECLTVLEGH------ENEVKCVAWAPSGNLLATCSR-DKSVWIWEVDE 136
Query: 248 RGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE----VKAAPVGWT-----NG-TSK 297
E+ H + V ++ + S S K W G TS
Sbjct: 137 ENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTST 196
Query: 298 IGGKESQPYNV-IAIGSQDRTITVWTTASP-----------RPLFVAKHFFTQSVVDLSW 345
+ G P +A S D T+ +W P + + F ++V D++W
Sbjct: 197 VWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAW 256
Query: 346 SP-DGYSLFACSLDG 359
P G AC DG
Sbjct: 257 CPLTGALATACGDDG 271
Score = 101 (40.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 173 VAWDPIGSFIASQSDDKTVIIW-RTSD-WSLAH-RTDGHWAKSLGSTFFRRLGWSPCGHF 229
VAW+P G+ +AS D+T+ IW R D W DGH R++ WSPCG++
Sbjct: 22 VAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGH------QRTVRKVAWSPCGNY 75
Query: 230 ITT 232
+ +
Sbjct: 76 LAS 78
Score = 61 (26.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 307 NVIAIGSQDRTITVWTTASPRPLFVAK--HFFTQSVVDLSWSPDGYSLFACSLDGTVANF 364
N++A S+D+++ +W + TQ V + W P L +CS D V +
Sbjct: 118 NLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVY 177
Query: 365 HFE 367
E
Sbjct: 178 KEE 180
Score = 47 (21.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 337 TQSVVDLSWSPDGYSLFACSLDGTV 361
T +V L++ P G L +CS D TV
Sbjct: 194 TSTVWGLTFDPSGQRLASCSDDCTV 218
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 185 (70.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 50/141 (35%), Positives = 67/141 (47%)
Query: 58 LLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV 117
LL TL H G V W G+ AS +D+ I + K D + W V
Sbjct: 6 LLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKS--------------DTDRW-V 50
Query: 118 AMTLR--GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGV 173
A T+ GHT + +L WS LAS S D T+ +W+ +G C A L GH + VK V
Sbjct: 51 AQTVLTDGHTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSV 110
Query: 174 AWDPIGSFIASQSDDKTVIIW 194
W G+ +A+ S DK+V IW
Sbjct: 111 TWSRSGNLLATCSRDKSVWIW 131
Score = 170 (64.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 47/141 (33%), Positives = 68/141 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIEN-WKVA 118
ATL H V V W++ G +A+ S D+ + I E PD E+ ++
Sbjct: 98 ATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIH-----------HAPDQEDEYECV 146
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM----STGICTAVLRGHSSLVKGVA 174
L GHT DV + W P + +LAS S DNTI ++ S L HSS V ++
Sbjct: 147 AVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSIS 206
Query: 175 WDPIGSFIASQSDDKTVIIWR 195
+D G +AS S+D TV +W+
Sbjct: 207 FDATGQRLASCSEDTTVKVWQ 227
Score = 140 (54.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 35/123 (28%), Positives = 56/123 (45%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG---ICTAVLR-GHSSLVK 171
++ TL GH V W P + AS D TI +WN S + VL GH+ ++
Sbjct: 5 ELLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIR 64
Query: 172 GVAWDPIGSFIASQSDDKTVIIW--RTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHF 229
+AW G ++AS S D TV +W ++ ++ +GH + + WS G+
Sbjct: 65 ELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGH------DNEVKSVTWSRSGNL 118
Query: 230 ITT 232
+ T
Sbjct: 119 LAT 121
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 61/224 (27%), Positives = 92/224 (41%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD---W-SLAHRTDGHWAKSLGSTFF 218
L GH+ V AW P G AS +DKT+ +W SD W + TDGH +
Sbjct: 10 LTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGH------TRTI 63
Query: 219 RRLGWSPCGHFITTTHGFQKPRHSAPVLER--GEWAATFDFLGHNAPIIVVKFNHS---- 272
R L WS CGH++ + F + V ++ GE+ GH+ + V ++ S
Sbjct: 64 RELAWSCCGHYLASA-SFDT---TVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLL 119
Query: 273 --MFRRNSASSQEVKAAP--------VGWTNGTSKIGGKES-QPY-NVIAIGSQDRTITV 320
R S E+ AP V NG ++ K P +++A S D TI +
Sbjct: 120 ATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRM 179
Query: 321 WT---TASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ S + + +V +S+ G L +CS D TV
Sbjct: 180 YRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTV 223
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 41/158 (25%), Positives = 68/158 (43%)
Query: 53 ESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEP-PD 111
+S +L L H +V + + G+ +AS S+D + + ++ G P PD
Sbjct: 186 DSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNAL----GIPCPD 241
Query: 112 IEN-WKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIW--------NMSTGICTA 161
WK TL G H+ V D++W +LA+ D+T+ I+ N T
Sbjct: 242 RGTIWKCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREASDSDRNEPTFELVV 301
Query: 162 VLRGHSSLVKGVAWDP-IGSFIASQSDDKTVIIWRTSD 198
+ HS VAW P + + + SDD + +W+ D
Sbjct: 302 TVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLWQYVD 339
Score = 49 (22.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/74 (21%), Positives = 33/74 (44%)
Query: 303 SQPYNVIAIGSQDRTITVWTTA-SPRP-----LFVAKHFFTQSVVDLSWSPDGYSLFACS 356
S+ N++A S+D+++ +W +P + TQ V + W P L + S
Sbjct: 113 SRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASAS 172
Query: 357 LDGTVANFHFEVKE 370
D T+ + ++ +
Sbjct: 173 YDNTIRMYRQDLAD 186
Score = 48 (22.0 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 305 PYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPD-GYSLFACSLDGTVAN 363
P N + I DR T+W + + + ++SV D+ W G AC D TV
Sbjct: 231 PDNALGIPCPDRG-TIW-----KCVCTLSGYHSRSVYDIDWCKQTGLLATACG-DDTVRI 283
Query: 364 F 364
F
Sbjct: 284 F 284
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 139 (54.0 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
A GH V +N+SP +LASGS D T+ IW + + V R H++ V+ V +
Sbjct: 54 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS 113
Query: 178 IGSFIASQSDDKTVIIWRT 196
G + + SDDKTV +W T
Sbjct: 114 DGQLLVTASDDKTVKVWST 132
Score = 132 (51.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 39/153 (25%), Positives = 66/153 (43%)
Query: 133 WSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVI 192
+SPD ++ S S D T+ +W+ ++ C H V V + P G+ IA+ D TV
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVK 212
Query: 193 IWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWA 252
+W T HR H+ L S L + P G+++ T + +L+ E
Sbjct: 213 VWDTR----THRLVQHY--QLHSAAVNALSFHPSGNYLITASSDS----TLKILDLMEGR 262
Query: 253 ATFDFLGHNAPIIVVKFNHS-MFRRNSASSQEV 284
+ GH P V F+ + + + S ++V
Sbjct: 263 LLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Score = 125 (49.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/89 (37%), Positives = 45/89 (50%)
Query: 106 SGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRG 165
S E P +E +GH V +++S + LASGS+D+T+ IW+M G
Sbjct: 5 SQEDPSLERH-----FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTG 59
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
H V V + P G +AS S DKTV IW
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIW 88
Score = 117 (46.2 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 112 IENWKVAMTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
+ N K T+ R HTA V +++ D +L + S D T+ +W+ L H + V
Sbjct: 89 VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWV 148
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW-RTS 197
+ + P G I S SDDKTV +W +TS
Sbjct: 149 RCAKFSPDGRLIVSASDDKTVKLWDKTS 176
Score = 106 (42.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/104 (25%), Positives = 50/104 (48%)
Query: 99 SGTTEFGSGEPPDIENW-----KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN 153
SGT +G ++ W ++ + H+A V L++ P + L + S D+T+ I +
Sbjct: 198 SGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 154 MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTS 197
+ G L GH VA+ G + AS D+ V++W+++
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 79 (32.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 56 QRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK 95
QR L +L H V C +++ GR I S SDD+ + + +K
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Score = 77 (32.2 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 4 EKPSWVRH-EGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA 60
E PS RH +G + + +D A+G D + IW+MK + +
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR---------- 56
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
H +V CV ++ G +ASGS D+ + I
Sbjct: 57 -FTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 70 (29.7 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF 104
+ D S +R + H +V CV ++ + +++ASGS D ++I KP S F
Sbjct: 6 QEDPSLER---HFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF 57
Score = 69 (29.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 308 VIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
++ S D+T+ VW+T R LF + +H V +SPDG + + S D TV +
Sbjct: 117 LLVTASDDKTVKVWSTHRQRFLFSLTQHI--NWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 367 EVKELGH 373
+E H
Sbjct: 175 TSRECVH 181
Score = 65 (27.9 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQS--VVDLSWSPDGYSLFACSLDGTV 361
IA D T+ VW T + R + +H+ S V LS+ P G L S D T+
Sbjct: 202 IAAAGMDNTVKVWDTRTHR---LVQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 49/148 (33%), Positives = 69/148 (46%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
T + H VN ++W G +AS SDD + I K + + + K T
Sbjct: 354 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHS-------KEIYT 406
Query: 121 LRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
++ N P+ SI LAS S D+T+ +W++ G+CT L H V VA+ P G
Sbjct: 407 IKWSPTGPATSN--PNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDG 464
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDG 207
++AS S DK V IW T SL H G
Sbjct: 465 KYLASGSFDKYVHIWNTQSGSLVHSYQG 492
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 70/255 (27%), Positives = 112/255 (43%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM---STGICTA-VLR------GH- 166
A LRGH ++V W+P +LASGS D+T IWN+ S G T VLR GH
Sbjct: 172 ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHD 231
Query: 167 ---SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A S D IW T + +LA H K G F L W
Sbjct: 232 VPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQH--K--GPIF--ALKW 284
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G+++ + G K GE F F H+AP + V + ++M + ++
Sbjct: 285 NKKGNYVLSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNMTFASCSTDMC 340
Query: 284 VKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPLF-VAKH 334
+ PV G T+++ + P ++ A S D T+ +W+ + + H
Sbjct: 341 IHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAH 400
Query: 335 FFTQSVVDLSWSPDG 349
++ + + WSP G
Sbjct: 401 --SKEIYTIKWSPTG 413
Score = 134 (52.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 32/98 (32%), Positives = 43/98 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T +GHT +V + W P +LAS S D T+ IW+M C L+ HS + + W P G
Sbjct: 354 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 413
Query: 180 S---------FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS S D TV +W H H
Sbjct: 414 PATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKH 451
Score = 110 (43.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 48/185 (25%), Positives = 72/185 (38%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ +N N STQ +L +
Sbjct: 178 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNGGSTQLVLR---------H 223
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + + EN +A TL H +
Sbjct: 224 CIREGGHD--VPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFA 281
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 282 LKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMC 340
Query: 191 VIIWR 195
+ + R
Sbjct: 341 IHVCR 345
Score = 60 (26.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 467 LASGSFDKYVHIWNTQSGS--LVHSYQGTGGIFEVCWNARGDKVGASASDGSV 517
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 48/148 (32%), Positives = 69/148 (46%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
T + H VN ++W G +AS SDD + I K + + + K T
Sbjct: 354 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHS-------KEIYT 406
Query: 121 LRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
++ N P+ SI LAS S D+T+ +W++ G+CT L H V +A+ P G
Sbjct: 407 IKWSPTGPATSN--PNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDG 464
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDG 207
++AS S DK V IW T SL H G
Sbjct: 465 KYLASGSFDKCVHIWNTQSGSLVHSYQG 492
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 94/371 (25%), Positives = 139/371 (37%)
Query: 23 PGALRFATGGGDHK-VRIWNMKSVGKNFENDESTQRLLAT-LRDHFGSVNCVRWAKHGRY 80
P +R AT G+ N S + D AT LR H V W
Sbjct: 134 PPKIREATVNGEENGAHEINNHSKPMEIDRDVEIPPNKATVLRGHESEVFICAWNPVSDL 193
Query: 81 IASGSDDQVILIHEKKPGS--GTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS 138
+ASGS D I S G+T+ E W + + DV L+W+ D +
Sbjct: 194 LASGSGDSTARIWNLNENSNGGSTQLVLRHCIR-EGWHDVPSNK----DVTSLDWNSDGT 248
Query: 139 ILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
+LA GS D IW G + L H + + W+ G++I S DKT IIW
Sbjct: 249 LLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHT 307
Query: 199 WSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTHGFQKP-----RHSAPVLER 248
+ H A +L +T F G C H G P H+ V
Sbjct: 308 GEAKQQFPFHSAPALDVDWQNNTTFASCGTDMCIHVCRL--GCDLPVKTFQGHTNEV-NA 364
Query: 249 GEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKA-APVGWTNGTSKIGGKESQPYN 307
+W + L + + +K SM + A +++A + +T S G S P +
Sbjct: 365 IKWDPSGMLLASCSDDMTLKI-WSM--KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 421
Query: 308 VIAIGSQ--DRTITVWTTASPRPLFVAKHFFT---QSVVDLSWSPDGYSLFACSLDGTVA 362
I + S D T+ +W V H T + V +++SPDG L + S D V
Sbjct: 422 SIMLASASFDSTVRLWDVEQG----VCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVH 477
Query: 363 NFHFEVKELGH 373
++ + L H
Sbjct: 478 IWNTQSGSLVH 488
Score = 109 (43.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 51/192 (26%), Positives = 75/192 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA-TLRDHFGSV 69
HE ++F P + A+G GD RIWN+ +N N STQ +L +R+ + V
Sbjct: 178 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNGGSTQLVLRHCIREGWHDV 232
Query: 70 ------NCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRG 123
+ W G +A GS D G + EN +A TL
Sbjct: 233 PSNKDVTSLDWNSDGTLLAMGSYD------------GFARIWT------ENGNLASTLGQ 274
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIA 183
H + L W+ + + S +D T IW+ TG HS+ V W +F A
Sbjct: 275 HKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-A 333
Query: 184 SQSDDKTVIIWR 195
S D + + R
Sbjct: 334 SCGTDMCIHVCR 345
Score = 61 (26.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 467 LASGSFDKCVHIWNTQSGS--LVHSYQGTGGIFEVCWNARGDKVGASASDGSV 517
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 165 (63.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D ST+ T + H V + W+ G+ +ASG + IL+ + P +G
Sbjct: 93 DLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWD--PSTGK---------- 140
Query: 112 IENWKVAMTLRGHTADVVDLNW-----SPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
+V L GH+ + L+W +P+ +AS S D ++ +W+ + G C +L GH
Sbjct: 141 ----QVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGH 196
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSL 213
+ V + W G + S S D+T+ +WR D L GH W ++
Sbjct: 197 TQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 244
Score = 164 (62.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH A V + WS D +L SGS D+T+ +W++ A L GH+ V V W
Sbjct: 356 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDW 415
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G +AS DK + IWR
Sbjct: 416 SPDGQRVASGGKDKCLRIWR 435
Score = 156 (60.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 99 SGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI 158
SG+ +F E+ K + GH A + + +SPD I+AS S D +I +W+ TG
Sbjct: 297 SGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGK 356
Query: 159 CTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
A LRGH + V +AW + S S D T+ +W LA GH A + +
Sbjct: 357 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGH-ADEVYA--- 412
Query: 219 RRLGWSPCGHFITT 232
+ WSP G + +
Sbjct: 413 --VDWSPDGQRVAS 424
Score = 140 (54.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+L GH+ V+ + +SP LASGS D T+ W++ST +GH V ++W P G
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGSTFFRRLGWSP 225
+AS + +++W S R GH S + L W P
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGH------SKWITGLSWEP 160
Score = 92 (37.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIW 152
D++ K+A L GH +V ++WSPD +ASG D + IW
Sbjct: 393 DVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 87 (35.7 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 140 LASGSLDNTIHIWNMSTGICT-AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW--RT 196
L SGS D T+ +W+ + A + GH +L+ V + P IAS S DK++ +W RT
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 197 SDWSLAHRTDGHWA 210
+ + R GH A
Sbjct: 355 GKYLASLR--GHVA 366
Score = 75 (31.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 24/72 (33%), Positives = 33/72 (45%)
Query: 291 WTNGTSKIGGKESQPYNVIAIGSQDRTITVW-TTASPRPLFVAKHFFTQSVVDLSWSPDG 349
W G S + +A S+D ++ VW TTA + H TQSV L W DG
Sbjct: 152 WITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGH--TQSVTCLRWGGDG 209
Query: 350 YSLFACSLDGTV 361
L++ S D T+
Sbjct: 210 L-LYSASQDRTI 220
Score = 75 (31.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKK 96
D T + LA+LR H +V + W+ R + SGS D + + + K
Sbjct: 351 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 395
Score = 72 (30.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+G GD VR W++ + +F T + H V + W+
Sbjct: 68 VISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-----------TCQGHRHWVLSISWS 116
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
G+ +ASG + IL+ + G
Sbjct: 117 PDGKTLASGCKNGQILLWDPSTG 139
Score = 58 (25.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
+IA S D++I +W + + L + +V ++WS D L + S D T+ + +
Sbjct: 337 IIASASFDKSIKLWDGRTGKYL-ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 395
Query: 368 VKELGHRLSDAELDEL 383
++L L DE+
Sbjct: 396 AQKLAADLP-GHADEV 410
Score = 56 (24.8 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ GS D T+ VW + + L V + WSPDG
Sbjct: 379 LLVSGSSDSTLKVWDVKAQK-LAADLPGHADEVYAVDWSPDG 419
Score = 52 (23.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 305 PYNVIAIGSQDRTITVWTTASPR-PLFVAKHFFTQSVVD-LSWSPDGYSLFACSLDGTV 361
P +++ GS D T+ +W+ A + PL A+ Q++++ + +SPD + + S D ++
Sbjct: 292 PERLVS-GSDDFTLFMWSPAEDKKPL--ARMTGHQALINQVLFSPDSRIIASASFDKSI 347
Score = 49 (22.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
LA + H +N V ++ R IAS S D+ I + + + G
Sbjct: 316 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG 355
Score = 43 (20.2 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 313 SQDRTITVW 321
SQDRTI VW
Sbjct: 215 SQDRTIKVW 223
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 189 (71.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 47/149 (31%), Positives = 71/149 (47%)
Query: 49 FENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE 108
++ +E + TL H V V WA G +A+ S D+ + + E
Sbjct: 88 WKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD------------ 135
Query: 109 PPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGH 166
+ + ++ L HT DV + W P +LAS S D+T+ ++ +C A L GH
Sbjct: 136 --EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH 193
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWR 195
S V +A+DP G +AS SDD+TV IWR
Sbjct: 194 ESTVWSLAFDPSGQRLASCSDDRTVRIWR 222
Score = 163 (62.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 44/149 (29%), Positives = 68/149 (45%)
Query: 65 HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGH 124
H +V V W+ G Y+AS S D I +K ++++ TL GH
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNE---------------DDFECVTTLEGH 104
Query: 125 TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVAWDPIGSF 181
+V + W+P ++LA+ S D ++ +W + C +VL H+ VK V W P
Sbjct: 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164
Query: 182 IASQSDDKTVIIWRTS--DWSLAHRTDGH 208
+AS S D TV ++R DW +GH
Sbjct: 165 LASASYDDTVKLYREEEDDWVCCATLEGH 193
Score = 157 (60.3 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 56/213 (26%), Positives = 90/213 (42%)
Query: 131 LNWSPDDSILASGSLDNTIHIWNMS--TGICTAVL-RGHSSLVKGVAWDPIGSFIASQSD 187
L W+P ++LAS D ++ IW + IC +VL GH V+ VAW P G+++AS S
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 188 DKTVIIWRTS--DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
D T IW+ + D+ +GH + + W+P G+ + T K V
Sbjct: 82 DATTCIWKKNEDDFECVTTLEGH------ENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEV----KAAPVGWTNGTSKIGGK 301
E E+ H + V ++ S SAS + + W + + G
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC-CATLEGH 193
Query: 302 ESQPYNV--------IAIGSQDRTITVWTTASP 326
ES +++ +A S DRT+ +W P
Sbjct: 194 ESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226
Score = 151 (58.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 34/89 (38%), Positives = 45/89 (50%)
Query: 113 ENWKVAMTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTAVLRGHSSL 169
++W L GH V + WSP + LAS S D T IW N C L GH +
Sbjct: 48 DSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENE 107
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
VK VAW P G+ +A+ S DK+V +W +
Sbjct: 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDE 136
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 47/161 (29%), Positives = 71/161 (44%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI-HEKKPGSGTTEFG 105
K + +E ATL H +V + + G+ +AS SDD+ + I + PG+
Sbjct: 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234
Query: 106 SGEPPDIENWKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI------ 158
SG +WK TL G H+ + D+ W LA+ D+ I ++ G
Sbjct: 235 SGSEA---SWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQPT 291
Query: 159 --CTA-VLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWR 195
TA V + HS V VAW+P +AS SDD + W+
Sbjct: 292 FSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDDGELAFWK 332
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 592 SGSVAATTTTLSIRVFDKKEGED 614
+G++A +IRVF++ G D
Sbjct: 264 TGTLATACGDDAIRVFEEDPGSD 286
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 81/345 (23%), Positives = 150/345 (43%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D ST+ T + H V + W+ G+ +ASG + +L+ + P +G
Sbjct: 142 DLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWD--PSTGL---------- 189
Query: 112 IENWKVAMTLRGHTADVVDLNW-----SPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
+V TL GH+ + L+W +P+ +AS S D ++ +W+ + G C +L GH
Sbjct: 190 ----QVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 245
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSLG-STFFR-RLG 222
+ V + W G + S S D+T+ +WR D L GH W ++ ST + R G
Sbjct: 246 TQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 304
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVL-ERGEWAATFDFLGHNAP--IIVVKFNHSMFRRNS 278
+ P T Q + S L ER ++ ++ + P ++ + ++F +
Sbjct: 305 AFEPA----EATVNAQDLQGSLKELKERA--SSRYNLVRGQGPERLVSGSDDFTLFLWSP 358
Query: 279 ASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQ 338
A ++ A G +++ S ++A S D++I +W + + L +
Sbjct: 359 AEDKKPLARMTGHQALINQV--LFSPDSRIVASASFDKSIKLWDGRTGKYL-ASLRGHVA 415
Query: 339 SVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDEL 383
+V ++WS D L + S D T+ + + ++L L DE+
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLP-GHADEV 459
Score = 160 (61.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH A V + WS D +L SGS D+T+ +W++ L GH+ V V W
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDW 464
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G +AS DK + IWR
Sbjct: 465 SPDGQRVASGGKDKCLRIWR 484
Score = 154 (59.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 99 SGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI 158
SG+ +F E+ K + GH A + + +SPD I+AS S D +I +W+ TG
Sbjct: 346 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 159 CTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
A LRGH + V +AW + S S D T+ +W LA GH A + +
Sbjct: 406 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGH-ADEVYA--- 461
Query: 219 RRLGWSPCGHFITT 232
+ WSP G + +
Sbjct: 462 --VDWSPDGQRVAS 473
Score = 145 (56.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/107 (32%), Positives = 51/107 (47%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+L GH+ V+ + +SP LASGS D T+ W++ST +GH V ++W P G
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGSTFFRRLGWSP 225
+AS + V++W S RT GH S + L W P
Sbjct: 169 KKLASGCKNGQVLLWDPSTGLQVGRTLTGH------SKWITGLSWEP 209
Score = 72 (30.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+G GD VR W++ + +F T + H V + W+
Sbjct: 117 VISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-----------TCKGHRHWVLSISWS 165
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
G+ +ASG + +L+ + G
Sbjct: 166 PDGKKLASGCKNGQVLLWDPSTG 188
Score = 56 (24.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ GS D T+ VW + + L V + WSPDG
Sbjct: 428 LLVSGSSDSTLKVWDVKAQK-LATDLPGHADEVYAVDWSPDG 468
Score = 50 (22.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 27/82 (32%), Positives = 36/82 (43%)
Query: 313 SQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELG 372
SQDRTI VW A L V ++ S D Y+L + + A + ++L
Sbjct: 264 SQDRTIKVWR-AHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVN--AQDLQ 319
Query: 373 HRLSDAELDELKRSRYGDVRGR 394
L EL E SRY VRG+
Sbjct: 320 GSLK--ELKERASSRYNLVRGQ 339
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 179 (68.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 69/236 (29%), Positives = 102/236 (43%)
Query: 58 LLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV 117
LL L H G W G +A+ +D+ I I E S + W V
Sbjct: 6 LLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIW--------AEDAS------QRW-V 50
Query: 118 AMTLR--GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGV 173
A T+ GH+ + D+ WSP LAS S D T+ IW+ +G C A L GH + VK V
Sbjct: 51 AKTVLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSV 110
Query: 174 AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTF--FRRLGWSPCGHFIT 231
+W GS +A+ S DK+V W W +A + A L + +++ W P +
Sbjct: 111 SWSKSGSLLATCSRDKSV--WV---WEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILA 165
Query: 232 TTHGFQKPRHSAPVLERGEWAATFDFL-GHNAPIIVVKFNHSMFRRNSASS-QEVK 285
+ + L +W++ FD L H + + + F+ S R S S Q VK
Sbjct: 166 SASYDNTIKLYKEDLADSDWSS-FDTLVSHESTVWSISFDGSGNRLASCSDDQTVK 220
Score = 159 (61.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 46/140 (32%), Positives = 72/140 (51%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W+K G +A+ S D+ + + E + E + ++ A
Sbjct: 98 ATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEV----------AQE----DEYECAA 143
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTA--VLRGHSSLVKGVAW 175
L HT DV + W P + ILAS S DNTI ++ +++ ++ L H S V +++
Sbjct: 144 VLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISF 203
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G+ +AS SDD+TV IW+
Sbjct: 204 DGSGNRLASCSDDQTVKIWQ 223
Score = 144 (55.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 53/226 (23%), Positives = 90/226 (39%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG---ICTAVLR-GHSSLVKGVAWD 176
L GH W P ++LA+ D TI IW + VL GHS ++ VAW
Sbjct: 10 LTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWS 69
Query: 177 PIGSFIASQSDDKTVIIW--RTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTH 234
P G ++AS S D TV IW ++ ++ +GH + + WS G + T
Sbjct: 70 PCGQYLASASFDATVAIWDKKSGEFECNATLEGH------ENEVKSVSWSKSGSLLATCS 123
Query: 235 GFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN-HSMFRRNSASSQEVKA-----AP 288
K V + E+ H + V+++ H +++ +K A
Sbjct: 124 R-DKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLAD 182
Query: 289 VGWTNGTSKIGGKESQPYNV--------IAIGSQDRTITVWTTASP 326
W++ + + ES +++ +A S D+T+ +W P
Sbjct: 183 SDWSSFDTLVS-HESTVWSISFDGSGNRLASCSDDQTVKIWQEYKP 227
Score = 49 (22.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 332 AKHFFTQSVVDLSWSPDGYSLFAC-SLDGTVANFHFEVKE 370
+KH +Q V + W+P L S DG V + +E +E
Sbjct: 298 SKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLWKYEPEE 337
Score = 47 (21.6 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 295 TSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSW-SPDGYSLF 353
T KI +E +P N + D T VW + + + ++SV D+SW G
Sbjct: 218 TVKIW-QEYKPGNEFGVSCPDNT-PVW-----KCVCTLAGYHSRSVYDISWCKQSGLLAT 270
Query: 354 ACSLD 358
AC D
Sbjct: 271 ACGDD 275
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 164 (62.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH A V + WS D +L SGS D+T+ +W++ A L GH+ V V W
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDW 464
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G +AS DK + IWR
Sbjct: 465 SPDGQRVASGGKDKCLRIWR 484
Score = 163 (62.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D ST+ T + H V + W+ G+ +ASG + IL+ + P +G
Sbjct: 142 DLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWD--PSTGK---------- 189
Query: 112 IENWKVAMTLRGHTADVVDLNW-----SPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
+V L GH+ + L+W +P+ +AS S D ++ +W+ + G C +L GH
Sbjct: 190 ----QVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGH 245
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSL 213
+ V + W G + S S D+T+ +WR D L GH W ++
Sbjct: 246 TQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 155 (59.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 99 SGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI 158
SG+ +F E+ K + GH A + + +SPD I+AS S D +I +W+ TG
Sbjct: 346 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGK 405
Query: 159 CTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
A LRGH + V +AW + S S D T+ +W LA GH A + +
Sbjct: 406 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGH-ADEVYA--- 461
Query: 219 RRLGWSPCGHFITT 232
+ WSP G + +
Sbjct: 462 --VDWSPDGQRVAS 473
Score = 140 (54.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+L GH+ V+ + +SP LASGS D T+ W++ST +GH V ++W P G
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 168
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGSTFFRRLGWSP 225
+AS + +++W S R GH S + L W P
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRALAGH------SKWITALSWEP 209
Score = 92 (37.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIW 152
D++ K+A L GH +V ++WSPD +ASG D + IW
Sbjct: 442 DVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 88 (36.0 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 140 LASGSLDNTIHIWNMSTGICT-AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW--RT 196
L SGS D T+ +W+ + A + GH +L+ V + P IAS S DK++ +W RT
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 197 SDWSLAHRTDGHWA 210
+ + R GH A
Sbjct: 404 GKYLASLR--GHVA 415
Score = 75 (31.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKK 96
D T + LA+LR H +V + W+ R + SGS D + + + K
Sbjct: 400 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Score = 72 (30.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+G GD VR W++ + +F T + H V + W+
Sbjct: 117 VISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-----------TCQGHRHWVLSISWS 165
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
G+ +ASG + IL+ + G
Sbjct: 166 PDGKKLASGCKNGQILLWDPSTG 188
Score = 58 (25.5 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
+IA S D++I +W + + L + +V ++WS D L + S D T+ + +
Sbjct: 386 IIASASFDKSIKLWDGRTGKYL-ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Query: 368 VKELGHRLSDAELDEL 383
++L L DE+
Sbjct: 445 AQKLAADLP-GHADEV 459
Score = 56 (24.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ GS D T+ VW + + L V + WSPDG
Sbjct: 428 LLVSGSSDSTLKVWDVKAQK-LAADLPGHADEVYAVDWSPDG 468
Score = 51 (23.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 312 GSQDRTITVWTTASPR-PLFVAKHFFTQSVVD-LSWSPDGYSLFACSLDGTV 361
GS D T+ +W+ A + PL A+ Q++++ + +SPD + + S D ++
Sbjct: 347 GSDDFTLFLWSPAEDKKPL--ARMTGHQALINQVLFSPDSRIIASASFDKSI 396
Score = 49 (22.3 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
LA + H +N V ++ R IAS S D+ I + + + G
Sbjct: 365 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG 404
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 181 (68.8 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 73/265 (27%), Positives = 104/265 (39%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I SG T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSL---SGNT------------WTTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
L GH + ++ WSP LAS S D T IW+ CTA L GH + VK V+W G
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKHE--CTATLEGHENEVKSVSWSRSG 111
Query: 180 SFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGF 236
+A+ S DK+V IW + ++ A + H S +R+ W P + +
Sbjct: 112 GLLATCSRDKSVWIWEVAGDDEFECAAVLNAH------SQDVKRVVWHPTKEILASASYD 165
Query: 237 QKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTS 296
+ A +W T H + + + F+ R S S + T
Sbjct: 166 NTIKMYAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSD-----------DATL 214
Query: 297 KIGGKESQPYNVIAIGSQDRTITVW 321
KI + P N I + D+T TVW
Sbjct: 215 KIW-RAYHPGNEAGIATPDKT-TVW 237
Score = 169 (64.5 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 51/146 (34%), Positives = 68/146 (46%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S ATL H V V W++ G +A+ S D+ + I E +G EF
Sbjct: 87 SKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF--------- 134
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST----GICTAVLRGHSSL 169
+ A L H+ DV + W P ILAS S DNTI ++ S CTA L H+S
Sbjct: 135 --ECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDSDWDCTATLSSHTST 192
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWR 195
V + +D G + S SDD T+ IWR
Sbjct: 193 VWSIDFDADGERLVSCSDDATLKIWR 218
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/152 (30%), Positives = 67/152 (44%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD + I PG+ E G P WK
Sbjct: 184 ATLSSHTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGN---EAGIATPDKTTVWKCV 240
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG---------ICTAVLRGHSS 168
TL G HT + D++W ++AS D+ I I+ S+ + T+ H
Sbjct: 241 CTLSGLHTRAIYDVSWCKLTGLIASACGDDAIRIFKESSDSKRDAPSFELLTSEESAHEQ 300
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ +
Sbjct: 301 DVNAVEWNPVNVGQLI-SCSDDGTIKIWKLQE 331
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 58/219 (26%), Positives = 89/219 (40%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW S + +T DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + + + E AT + GH + V ++ S
Sbjct: 64 EVRWSPCGEYLASA-SFDA---TTAIWSKHECTATLE--GHENEVKSVSWSRSGGLLATC 117
Query: 274 FRRNS------ASSQEVKAAPVGWTNGTSK-IGGKESQPYN-VIAIGSQDRTITVWTTA- 324
R S A E + A V N S+ + P ++A S D TI ++ +
Sbjct: 118 SRDKSVWIWEVAGDDEFECAAV--LNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESA 175
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S T +V + + DG L +CS D T+
Sbjct: 176 LDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATL 214
Score = 45 (20.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSPDGYS-LFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 300 QDVNAVEWNPVNVGQLISCSDDGTI 324
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 180 (68.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 73/311 (23%), Positives = 127/311 (40%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T H V+ ++++ D LAS S + IW+ TG VL GH V V++ P
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSLGSTFFRRLGWSPCGHFITTTHGFQ 237
+AS SDD+TV IW + SL +GH W +S+ + RL S
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 238 KPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK 297
+ W + F H++ ++ + + ++ ++ G + +
Sbjct: 504 TVPLQNNLESHDNWVRSVVF-SHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNS 562
Query: 298 IGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQS---VVDLSWSPDGYSLFA 354
+ S ++A S D T+ +W A+ +H F S + L++S L +
Sbjct: 563 VSF--SPDSRLLASASDDGTVKIWYAATG----TVQHTFDGSGRVAISLAFSHTSNLLAS 616
Query: 355 CSLDGTVANFHFEVKELGHRLSDAELD-ELKRSRYGDVRGRLANLAETPAQLLLEAAS-A 412
DGTV + E+ L H +LD E++R ++ +++L ++ L+A S A
Sbjct: 617 AMDDGTVKIWDMEIYSLRHTF---DLDHEIQRIQFDK---SMSSLITNVGRIQLDARSKA 670
Query: 413 KETTTKKVVSD 423
E V D
Sbjct: 671 TEGFASSQVLD 681
Score = 179 (68.1 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 76/284 (26%), Positives = 120/284 (42%)
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
V+ H+ + + ++ G+ + D + L+GH V + +S D ++ASGS D T
Sbjct: 311 VVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRT 370
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+ IW +TG+ H V V++ +AS SD V IW T SL + +GH
Sbjct: 371 VRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH 430
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR--HSAPVLERGEWAATFDFLGHNAPIIV 266
+ S F SP + + + + H+A G T + GHN +
Sbjct: 431 -DDCVNSVSF-----SPDSRLLASASDDRTVKIWHAAT----GSLQRTLE--GHNDWVRS 478
Query: 267 VKFNH-SMFRRNSASSQEVK---AAPVGWTNGT-SKIGGKESQPYN----VIAIGSQDRT 317
V F+H S +++ VK A V N S S ++ ++A S D T
Sbjct: 479 VVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMT 538
Query: 318 ITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ +W TA+ L V +S+SPD L + S DGTV
Sbjct: 539 VKIWDTATGS-LENTLEGHDDRVNSVSFSPDSRLLASASDDGTV 581
Score = 179 (68.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 79 RYIASGSDDQVILI---HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP 135
R+ +D V+ + H+ + + ++ G+ + D + L GH V +++SP
Sbjct: 382 RHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP 441
Query: 136 DDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWR 195
D +LAS S D T+ IW+ +TG L GH+ V+ V + IAS SDD TV IW
Sbjct: 442 DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWD 501
Query: 196 TSDWSLAHRTDGH--WAKSL 213
T+ L + + H W +S+
Sbjct: 502 TATVPLQNNLESHDNWVRSV 521
Score = 166 (63.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 70/251 (27%), Positives = 104/251 (41%)
Query: 122 RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF 181
+GH V +++S D +LAS S D T+ IW+ +T L GH+ VK V +
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRL 319
Query: 182 IASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRH 241
+AS SDD TV IW T+ +L GH S+ S F S I + + R
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGH-NDSVRSVVF-----SHDSRLIASGSNDRTVR- 372
Query: 242 SAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQ-EVKAAPVGWTNGTSKIGG 300
+ E F H ++ V F H R SAS VK + + + G
Sbjct: 373 ---IWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEG 429
Query: 301 KE--------SQPYNVIAIGSQDRTITVW--TTASPRPLFVAKHFFTQSVVDLSWSPDGY 350
+ S ++A S DRT+ +W T S + + + +SVV +S D
Sbjct: 430 HDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVV---FSHDSR 486
Query: 351 SLFACSLDGTV 361
+ + S D TV
Sbjct: 487 LIASASDDMTV 497
Score = 143 (55.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 54/204 (26%), Positives = 85/204 (41%)
Query: 18 SIDVQPGALRFATGGGDHKVRIWNMK--SVGKNFE--ND-------ESTQRLLATLRDHF 66
S+ P + A+ D V+IW+ S+ + E ND RL+A+ D
Sbjct: 436 SVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDM 495
Query: 67 GSVNCVRWAKHGRYIASGSDDQ----VILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLR 122
+V A S D V+ H+ + + ++ + + D + TL
Sbjct: 496 -TVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLE 554
Query: 123 GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
GH V +++SPD +LAS S D T+ IW +TG G + +A+ + +
Sbjct: 555 GHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLL 614
Query: 183 ASQSDDKTVIIWRTSDWSLAHRTD 206
AS DD TV IW +SL H D
Sbjct: 615 ASAMDDGTVKIWDMEIYSLRHTFD 638
Score = 70 (29.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
D +T L L+ H SV V ++ R IASGS+D+ + I E G
Sbjct: 333 DTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG 379
Score = 65 (27.9 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 24/94 (25%), Positives = 38/94 (40%)
Query: 6 PSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDH 65
P+ + + S+ + A+ GD V+IW D +T L TL H
Sbjct: 256 PAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIW-----------DTATSFLQNTLEGH 304
Query: 66 FGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGS 99
V V ++ R +AS SDD + I + G+
Sbjct: 305 NEWVKSVVFSHDSRLLASASDDGTVKIWDTATGT 338
Score = 45 (20.9 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 314 QDRTITVWT--TASPRPLFVAKHFFTQSVVDLSWSPDGYSL-FACSLDGTVA 362
Q T+ V+T T PL FF +V+ PDG L F S+ +A
Sbjct: 1636 QGDTLLVFTLVTIIFLPLSFMAAFFAIDIVEFPKQPDGLHLNFVSSIMSIMA 1687
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 187 (70.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 46/139 (33%), Positives = 67/139 (48%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ TL H V V WA G +A+ S D+ + + E + + ++
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD--------------EEDEYECV 143
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGHSSLVKGVAWD 176
L HT DV + W P +LAS S D+T+ ++ +C A L GH S V +A+D
Sbjct: 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFD 203
Query: 177 PIGSFIASQSDDKTVIIWR 195
P G +AS SDD+TV IWR
Sbjct: 204 PSGQRLASCSDDRTVRIWR 222
Score = 183 (69.5 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 55/203 (27%), Positives = 88/203 (43%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
H + + + P A+ GGD K+RIW E D + + + H +V
Sbjct: 14 HPDSRCWFLAWNPTGTLLASCGGDRKIRIWGT-------EGDSWICKSVLS-EGHQRTVR 65
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
V W+ G Y+AS S D I +K ++++ TL GH +V
Sbjct: 66 KVAWSPCGNYLASASFDATTCIWKKNQ---------------DDFECVTTLEGHENEVKS 110
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
+ W+P ++LA+ S D ++ +W + C +VL H+ VK V W P +AS S
Sbjct: 111 VAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY 170
Query: 188 DKTVIIWRTS--DWSLAHRTDGH 208
D TV +++ DW +GH
Sbjct: 171 DDTVKLYQEEGDDWVCCATLEGH 193
Score = 160 (61.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 60/213 (28%), Positives = 91/213 (42%)
Query: 131 LNWSPDDSILASGSLDNTIHIWNMS--TGICTAVL-RGHSSLVKGVAWDPIGSFIASQSD 187
L W+P ++LAS D I IW + IC +VL GH V+ VAW P G+++AS S
Sbjct: 22 LAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 188 DKTVIIWRTS--DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
D T IW+ + D+ +GH + + W+P G+ + T K V
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGH------ENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE-VKA-APVG--WTNGTSKIGGK 301
E E+ H + V ++ S SAS + VK G W + + G
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVC-CATLEGH 193
Query: 302 ESQPYNV--------IAIGSQDRTITVWTTASP 326
ES +++ +A S DRT+ +W P
Sbjct: 194 ESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLP 226
Score = 145 (56.1 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 49/147 (33%), Positives = 67/147 (45%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI-HEKKPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G+ +AS SDD+ + I + PG+ SG P +WK
Sbjct: 188 ATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP---SWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--------CTAVLR-GHSS 168
TL G HT + D+ W LA+ D+ I ++ G TA LR HS
Sbjct: 245 CTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQ 304
Query: 169 LVKGVAWDPI-GSFIASQSDDKTVIIW 194
V VAW+P +AS SDD V W
Sbjct: 305 DVNCVAWNPKEAGLLASCSDDGEVAFW 331
Score = 38 (18.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 592 SGSVAATTTTLSIRVFDKKEGED 614
+G++A +IRVF++ G D
Sbjct: 264 TGALATACGDDAIRVFEEDPGSD 286
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 187 (70.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 66/216 (30%), Positives = 99/216 (45%)
Query: 15 QIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRD--HFGSVNCV 72
+I+S D G L ATG D K+++ ++K D+ T L+ L + H ++ V
Sbjct: 16 KIWSFDFSQGIL--ATGSTDRKIKLVSVKY-------DDFT--LIDVLDETAHKKAIRSV 64
Query: 73 RWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLN 132
W H +A+GS D + I K+ + T E +A+ + GH +V +
Sbjct: 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRT---------FEMDLLAI-IEGHENEVKGVA 114
Query: 133 WSPDDSILASGSLDNTIHIWNMS-TGI---CTAVLRGHSSLVKGVAWDPIGSFIASQSDD 188
WS D LA+ S D ++ IW +G C +VL+ HS VK V W P + +AS S D
Sbjct: 115 WSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD 174
Query: 189 KTVIIWRT--SDWSLAHRTDGHWAKSLGSTFFRRLG 222
TV IW+ DW +GH S F + G
Sbjct: 175 DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEG 210
Score = 37 (18.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 312 GSQDRTITVW 321
GS D T+ VW
Sbjct: 217 GSDDSTVRVW 226
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 175 (66.7 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 79/322 (24%), Positives = 136/322 (42%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R ++L H +V V ++ G+Y+ASGS D + + S E P
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL----------STETPHF---- 150
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTA-VLRGHSSLVKGVAW 175
T +GH V+ ++WSPD LASG + I +W+ STG L GHS + G++W
Sbjct: 151 ---TCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSW 207
Query: 176 DPIGS-----FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
+P+ + ++AS S D +V IW T+ GH +S+ T R W G
Sbjct: 208 EPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGH-TQSV--TCLR---WGGDGLLY 261
Query: 231 TTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVG 290
+ + Q G T GH + + ++++ R + E P
Sbjct: 262 SAS---QDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL-RTGAFEPAEASVNPQD 317
Query: 291 WTNGTSKIGGKESQPYNVI--------AIGSQDRTITVWTTASPR-PLF-VAKHFFTQSV 340
++ + YN++ GS D T+ +W+ A + PL + H Q++
Sbjct: 318 LQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGH---QAL 374
Query: 341 VD-LSWSPDGYSLFACSLDGTV 361
++ + +SPD + + S D ++
Sbjct: 375 INQVLFSPDSRIVASASFDKSI 396
Score = 174 (66.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 49/169 (28%), Positives = 78/169 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D ST+ T + H V + W+ GR +ASG + IL+ + P +G
Sbjct: 142 DLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWD--PSTGK---------- 189
Query: 112 IENWKVAMTLRGHTADVVDLNW-----SPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
+V TL GH+ + L+W +P+ +AS S D ++ IW+ + G C +L GH
Sbjct: 190 ----QVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGH 245
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSL 213
+ V + W G + S S D+T+ +WR D L GH W ++
Sbjct: 246 TQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 159 (61.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH A V + WS D +L SGS D+T+ +W++ L GH+ V V W
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDW 464
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G +AS DK + IWR
Sbjct: 465 SPDGQRVASGGKDKCLRIWR 484
Score = 154 (59.3 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 99 SGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI 158
SG+ +F E+ K + GH A + + +SPD I+AS S D +I +W+ TG
Sbjct: 346 SGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 159 CTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
A LRGH + V +AW + S S D T+ +W LA GH A + +
Sbjct: 406 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGH-ADEVYA--- 461
Query: 219 RRLGWSPCGHFITT 232
+ WSP G + +
Sbjct: 462 --VDWSPDGQRVAS 473
Score = 98 (39.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIW 152
D++ K+AM L GH +V ++WSPD +ASG D + IW
Sbjct: 442 DVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 76 (31.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+G GD VR W++ + +F T + H V + W+
Sbjct: 117 VISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-----------TCKGHRHWVLSISWS 165
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
GR +ASG + IL+ + G
Sbjct: 166 PDGRKLASGCKNGQILLWDPSTG 188
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKK 96
D T + LA+LR H +V + W+ R + SGS D + + + K
Sbjct: 400 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Score = 57 (25.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ GS D T+ VW + + L + V + WSPDG
Sbjct: 428 LLVSGSSDSTLKVWDVKAQK-LAMDLPGHADEVYAVDWSPDG 468
Score = 57 (25.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 18/76 (23%), Positives = 36/76 (47%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
++A S D++I +W + + L + +V ++WS D L + S D T+ + +
Sbjct: 386 IVASASFDKSIKLWDGRTGKYL-ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Query: 368 VKELGHRLSDAELDEL 383
++L L DE+
Sbjct: 445 AQKLAMDLP-GHADEV 459
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 186 (70.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 66/257 (25%), Positives = 114/257 (44%)
Query: 113 ENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKG 172
E K T RGHTA++V L+++P +++A+GS+D T +W++ +G L GH + +
Sbjct: 165 ETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIIS 224
Query: 173 VAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
+++D G I + S D TV++W S H GH A+ + S F W C +T
Sbjct: 225 LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAE-ISSALF---SWD-CSLILT- 278
Query: 233 THGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWT 292
G G+ AT GH+ I+ F+++ +AS+ T
Sbjct: 279 --GSMDKTCMLWDATSGKCVATLT--GHDDEILDSCFDYTGKLIATASADGTARVYNATT 334
Query: 293 NGT-SKIGGKESQ-------PY-NVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDL 343
+K+ G E + P N + GS D+T +W + + L V + T +
Sbjct: 335 RKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGH-TDEIFSC 393
Query: 344 SWSPDGYSLFACSLDGT 360
+++ G + S D +
Sbjct: 394 AFNYKGNIVITGSKDNS 410
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 51/196 (26%), Positives = 90/196 (45%)
Query: 15 QIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFEN-----DESTQRLLATLRDHF--G 67
+I S+ R TG DH V +W+ S G+ E + L + G
Sbjct: 221 EIISLSFDTSGDRIITGSFDHTVVVWDA-STGRKVHTLIGHCAEISSALFSWDCSLILTG 279
Query: 68 SVN--CVRW-AKHGRYIAS--GSDDQVI---LIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
S++ C+ W A G+ +A+ G DD+++ + K + + G+ + K
Sbjct: 280 SMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCIT 339
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
L GH ++ ++++P + L +GS D T IW++ TG C VL GH+ + A++ G
Sbjct: 340 KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKG 399
Query: 180 SFIASQSDDKTVIIWR 195
+ + + S D + IWR
Sbjct: 400 NIVITGSKDNSCRIWR 415
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 66/288 (22%), Positives = 119/288 (41%)
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ + LR H + ++ + S +GS D T +W+ ++G L GH ++V +
Sbjct: 81 NFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAI 140
Query: 174 AWD-PIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
A++ P G IA+ S DKT +W H GH A+ + +F + G TT
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTT 200
Query: 233 THGFQKPRHSAPVLERGEWAA----TFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAP 288
+ V G A +FD G II F+H++ ++++ ++V
Sbjct: 201 AKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR--IITGSFDHTVVVWDASTGRKVHTL- 257
Query: 289 VGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSP 347
+G S S ++I GS D+T +W S + + + H ++D +
Sbjct: 258 IGHCAEISS--ALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH--DDEILDSCFDY 313
Query: 348 DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRL 395
G + S DGT ++ ++ +L E E+ + + RL
Sbjct: 314 TGKLIATASADGTARVYNATTRKCITKLEGHE-GEISKISFNPQGNRL 360
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/209 (25%), Positives = 93/209 (44%)
Query: 28 FATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLR------DHF--GSVN--CVRW-AK 76
F TG D ++W+ S G+ E + ++ + D GS + C W A+
Sbjct: 107 FITGSYDRTCKVWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAE 165
Query: 77 HGR--YIASGSDDQVILIHEKKPGSGTTEFGSGEPP----DIENWKVAMTLRGHTADVVD 130
G+ + G +++ + P S GS + DI++ + +TL GH A+++
Sbjct: 166 TGKCYHTFRGHTAEIVCL-SFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIIS 224
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV--AWDPIGSFIASQSDD 188
L++ + +GS D+T+ +W+ STG L GH + + +WD S I + S D
Sbjct: 225 LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDC--SLILTGSMD 282
Query: 189 KTVIIWRTSDWSLAHRTDGHWAKSLGSTF 217
KT ++W + GH + L S F
Sbjct: 283 KTCMLWDATSGKCVATLTGHDDEILDSCF 311
Score = 138 (53.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D + TL GH A++ +S D S++ +GS+D T +W+ ++G C A L GH +
Sbjct: 247 DASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEI 306
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+D G IA+ S D T ++ + + +GH
Sbjct: 307 LDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGH 344
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D + K TL GH +++D + ++A+ S D T ++N +T C L GH +
Sbjct: 289 DATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEI 348
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
++++P G+ + + S DKT IW +GH
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGH 386
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 186 (70.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 46/139 (33%), Positives = 67/139 (48%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ TL H V V WA G +A+ S D+ + + E + + ++
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD--------------EEDEYECV 143
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGHSSLVKGVAWD 176
L HT DV + W P +LAS S D+T+ ++ +C A L GH S V +A+D
Sbjct: 144 SVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFD 203
Query: 177 PIGSFIASQSDDKTVIIWR 195
P G +AS SDD+TV IWR
Sbjct: 204 PSGQRLASCSDDRTVRIWR 222
Score = 162 (62.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 60/213 (28%), Positives = 91/213 (42%)
Query: 131 LNWSPDDSILASGSLDNTIHIWNMS--TGICTAVL-RGHSSLVKGVAWDPIGSFIASQSD 187
L W+P ++LAS D I IW + IC +VL GH V+ VAW P G+++AS S
Sbjct: 22 LAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 188 DKTVIIWRTS--DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPV 245
D T IW+ + D+ +GH + + W+P G+ + T K V
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGH------ENEVKSVAWAPSGNLLATCSR-DKSVWVWEV 134
Query: 246 LERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE-VKA-APVG--WTNGTSKIGGK 301
E E+ H + V ++ S SAS + VK G W + + G
Sbjct: 135 DEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVC-CATLEGH 193
Query: 302 ESQPYNV--------IAIGSQDRTITVWTTASP 326
ES +++ +A S DRT+ +W P
Sbjct: 194 ESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLP 226
Score = 153 (58.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 34/89 (38%), Positives = 45/89 (50%)
Query: 113 ENWKVAMTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTAVLRGHSSL 169
++W L GH V + WSP + LAS S D T IW N C L GH +
Sbjct: 48 DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE 107
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
VK VAW P G+ +A+ S DK+V +W +
Sbjct: 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDE 136
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/147 (33%), Positives = 67/147 (45%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI-HEKKPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G+ +AS SDD+ + I + PG+ SG P +WK
Sbjct: 188 ATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP---SWKCI 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--------CTAVLR-GHSS 168
TL G HT + D+ W LA+ D+ I ++ G TA LR HS
Sbjct: 245 CTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQ 304
Query: 169 LVKGVAWDPIG-SFIASQSDDKTVIIW 194
V VAW+P +AS SDD V W
Sbjct: 305 DVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 38 (18.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 592 SGSVAATTTTLSIRVFDKKEGED 614
+G++A +IRVF++ G D
Sbjct: 264 TGALATACGDDAIRVFEEDPGSD 286
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 179 (68.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 73/265 (27%), Positives = 104/265 (39%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I SG T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSL---SGNT------------WTTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
L GH + ++ WSP LAS S D T IW+ CTA L GH + VK V+W G
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKHE--CTATLEGHENEVKSVSWSRSG 111
Query: 180 SFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGF 236
+A+ S DK+V IW + ++ A + H S +R+ W P + +
Sbjct: 112 GLLATCSRDKSVWIWEVAGDDEFECAAVLNAH------SQDVKRVVWHPTKEVLASASYD 165
Query: 237 QKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTS 296
+ A +W T H + + + F+ R S S + T
Sbjct: 166 NTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSD-----------DATL 214
Query: 297 KIGGKESQPYNVIAIGSQDRTITVW 321
KI + P N I + D+T TVW
Sbjct: 215 KIW-RAYHPGNDAGIATPDKT-TVW 237
Score = 167 (63.8 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 50/146 (34%), Positives = 68/146 (46%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S ATL H V V W++ G +A+ S D+ + I E +G EF
Sbjct: 87 SKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF--------- 134
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST----GICTAVLRGHSSL 169
+ A L H+ DV + W P +LAS S DNTI ++ S CTA L H+S
Sbjct: 135 --ECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDSDWDCTATLSSHTST 192
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWR 195
V + +D G + S SDD T+ IWR
Sbjct: 193 VWSIDFDADGERLVSCSDDATLKIWR 218
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/152 (28%), Positives = 66/152 (43%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD + I PG+ + G P WK
Sbjct: 184 ATLSSHTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGN---DAGIATPDKTTVWKCV 240
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG---------ICTAVLRGHSS 168
TL G H+ + D++W ++AS D+ I I+ + + TA H
Sbjct: 241 CTLSGEHSRAIYDVSWCKQTGLIASACGDDGIRIFKECSDSKRDAPTFELLTAEESAHEQ 300
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ +
Sbjct: 301 DVNAVEWNPVTAGQLI-SCSDDGTIKIWKLQE 331
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 59/219 (26%), Positives = 89/219 (40%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW S + +T DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + + + E AT + GH + V ++ S
Sbjct: 64 EVRWSPCGEYLASA-SFDA---TTAIWSKHECTATLE--GHENEVKSVSWSRSGGLLATC 117
Query: 274 FRRNS------ASSQEVKAAPVGWTNGTSK-IGGKESQPYN-VIAIGSQDRTITVWTTA- 324
R S A E + A V N S+ + P V+A S D TI ++ +
Sbjct: 118 SRDKSVWIWEVAGDDEFECAAV--LNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESA 175
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S T +V + + DG L +CS D T+
Sbjct: 176 LDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATL 214
Score = 45 (20.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSP-DGYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 300 QDVNAVEWNPVTAGQLISCSDDGTI 324
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 176 (67.0 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 66/231 (28%), Positives = 100/231 (43%)
Query: 58 LLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV 117
LL L H G V W +A+ +D+ I I GT G P K
Sbjct: 6 LLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWAD---DGT---GRWVP------KT 53
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAW 175
++ GHT + D+ WSP LAS S D T+ IW+ +G C A L GH + VK V+W
Sbjct: 54 VLS-DGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSW 112
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLG--STFFRRLGWSPCGHFITTT 233
G+ +A+ S DK+V IW +A + A L S +++ W P + +
Sbjct: 113 SKSGALLATCSRDKSVWIWE-----VAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASA 167
Query: 234 HGFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFNHSMFRRNSASSQE 283
+ L +W++ FD L H++ + + F+ S R S S +
Sbjct: 168 SYDNTIQLYREDLADSDWSS-FDTLASHDSTVWSIAFDASGSRLASCSDDQ 217
Score = 167 (63.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 47/140 (33%), Positives = 73/140 (52%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W+K G +A+ S D+ + I E + E + ++ A
Sbjct: 98 ATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEV----------AQE----DEYECAA 143
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTA--VLRGHSSLVKGVAW 175
L H+ DV + W P++ +LAS S DNTI ++ +++ ++ L H S V +A+
Sbjct: 144 VLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAF 203
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D GS +AS SDD+TV IW+
Sbjct: 204 DASGSRLASCSDDQTVRIWQ 223
Score = 149 (57.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 58/226 (25%), Positives = 93/226 (41%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIW-NMSTG--ICTAVLR-GHSSLVKGVAWD 176
L GH V W P D +LA+ D TI IW + TG + VL GH+ ++ VAW
Sbjct: 10 LSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWS 69
Query: 177 PIGSFIASQSDDKTVIIW--RTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTH 234
P G F+AS S D TV IW R+ ++ +GH + + WS G + T
Sbjct: 70 PCGRFLASASFDATVAIWDRRSGEFECNATLEGH------ENEVKSVSWSKSGALLATCS 123
Query: 235 GFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKF--NHSMFRR----NSASSQEVKAAP 288
K V + E+ H+ + V++ N + N+ A
Sbjct: 124 R-DKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLAD 182
Query: 289 VGWTNGTSKIGGKESQPYNVI--AIGSQ------DRTITVWTTASP 326
W++ + + +S +++ A GS+ D+T+ +W P
Sbjct: 183 SDWSSFDT-LASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKP 227
Score = 146 (56.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 46/150 (30%), Positives = 66/150 (44%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILI-HEKKPGSGTTEFGSGEPPD-IENWKVA 118
TL H +V + + G +AS SDDQ + I E KPG+ EFG P WK
Sbjct: 190 TLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGN---EFGVACPDGKTPVWKCV 246
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIW--------NMSTGICTAVLRGHSSL 169
TL G H+ V D++W ++A+ D+ + I+ N T A HS
Sbjct: 247 CTLSGFHSRAVYDISWCKKTGLIATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQD 306
Query: 170 VKGVAWDP-IGSFIASQSDDKTVIIWRTSD 198
V W P + + + SDD V +W+ D
Sbjct: 307 ANTVEWSPTVAGLLVTTSDDGDVKLWKFED 336
Score = 49 (22.3 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 23/71 (32%), Positives = 30/71 (42%)
Query: 308 VIAIGSQDRTITVW--TTASP--RPLF--VA-KHFFTQSVVDLSWSPDGYSLFAC-SLDG 359
+IA D + ++ SP P F VA KH +Q + WSP L S DG
Sbjct: 268 LIATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDDG 327
Query: 360 TVANFHFEVKE 370
V + FE E
Sbjct: 328 DVKLWKFEDDE 338
Score = 46 (21.3 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSW-SPDGYSLFACSLD 358
+E +P N + D VW + + F +++V D+SW G AC D
Sbjct: 223 QEYKPGNEFGVACPDGKTPVW-----KCVCTLSGFHSRAVYDISWCKKTGLIATACGDD 276
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 202 (76.2 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 45/113 (39%), Positives = 64/113 (56%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
TL GH+ V+ + +SPD +LASGS D T+ +W+ +TG LRGHS+ V+ VA+ P G
Sbjct: 732 TLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDG 791
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
+AS S DKTV +W + SL GH S R + +SP G + +
Sbjct: 792 RLLASGSFDKTVRLWDPATGSLQQTLRGH------SDTVRSVAFSPDGRLLAS 838
Score = 185 (70.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
TLRGH+ V + +SPD +LASGS D T+ +W+ +TG LRGHS V+ VA+ P G
Sbjct: 774 TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG 833
Query: 180 SFIASQSDDKTVIIW 194
+AS S DKTV +W
Sbjct: 834 RLLASGSFDKTVRLW 848
Score = 167 (63.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/121 (36%), Positives = 61/121 (50%)
Query: 113 ENWKVAM-TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
E W + TL GH+ V W+ +LASGS D T+ +W+ +TG L GHS V
Sbjct: 690 EKWGAELQTLEGHSNSV----WA----VLASGSDDETVRLWDPATGSLQQTLEGHSGWVL 741
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFIT 231
VA+ P G +AS S DKTV +W + SL GH S + R + +SP G +
Sbjct: 742 SVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGH------SNWVRSVAFSPDGRLLA 795
Query: 232 T 232
+
Sbjct: 796 S 796
Score = 146 (56.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 61/210 (29%), Positives = 95/210 (45%)
Query: 6 PSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFEN----DESTQRLLAT 61
PSW+ Q+ ++ + GA T G H +W + + G + E D +T L T
Sbjct: 679 PSWI----CQLPKVNEKWGA-ELQTLEG-HSNSVWAVLASGSDDETVRLWDPATGSLQQT 732
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGS-GTTEFGSGE-------PPD-- 111
L H G V V ++ GR +ASGS D+ + + + GS T G PD
Sbjct: 733 LEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGR 792
Query: 112 ----------IENWKVA-----MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST 156
+ W A TLRGH+ V + +SPD +LASGS D T+ +W+ +T
Sbjct: 793 LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPAT 852
Query: 157 GIC--TAVLRGHSSLVKGVAWDPIGSFIAS 184
G T +++G V + + GS+I++
Sbjct: 853 GTLQQTLIIKG---TVTELQFSQDGSYIST 879
Score = 38 (18.4 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLL 59
D V+I K++ +++ DE Q+L+
Sbjct: 385 DRFVKIKRDKNISEDWPGDEVIQKLV 410
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 187 (70.9 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 49/152 (32%), Positives = 70/152 (46%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + + K
Sbjct: 354 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHS-------K 406
Query: 117 VAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T++ N P+ SI LAS S D+T+ +W++ G+C L H V VA+
Sbjct: 407 EIYTIKWSPTGPATSN--PNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAF 464
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T SL H G
Sbjct: 465 SPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG 496
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 71/255 (27%), Positives = 112/255 (43%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM---STGICTA-VLR------GH- 166
A LRGH ++V W+P +LASGS D+T IWN+ S G T VLR GH
Sbjct: 176 ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHD 235
Query: 167 ---SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A+ S D IW T D +LA H K G F L W
Sbjct: 236 VPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQH--K--GPIF--ALKW 288
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G++I + G K GE F F H+AP + V + ++ + ++
Sbjct: 289 NKKGNYILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNTTFASCSTDMC 344
Query: 284 VKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPLF-VAKH 334
+ PV G T+++ + P ++ A S D T+ +W+ + + H
Sbjct: 345 IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAH 404
Query: 335 FFTQSVVDLSWSPDG 349
++ + + WSP G
Sbjct: 405 --SKEIYTIKWSPTG 417
Score = 133 (51.9 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 32/98 (32%), Positives = 43/98 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T +GHT +V + W P +LAS S D T+ IW+M C L+ HS + + W P G
Sbjct: 358 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 417
Query: 180 S---------FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS S D TV +W H H
Sbjct: 418 PATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKH 455
Score = 113 (44.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 48/185 (25%), Positives = 73/185 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ +N N STQ +L +
Sbjct: 182 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNGGSTQLVLR---------H 227
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + T + E+ +A TL H +
Sbjct: 228 CIREGGHD--VPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFA 285
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 286 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMC 344
Query: 191 VIIWR 195
+ + R
Sbjct: 345 IHVCR 349
Score = 61 (26.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 471 LASGSFDKCVHIWNTQSGS--LVHSYRGTGGIFEVCWNARGDKVGASASDGSV 521
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 182 (69.1 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 48/148 (32%), Positives = 70/148 (47%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEP 109
+ND+ L L H V CV WA G +A+ S D+ + I E
Sbjct: 91 KNDDF--ECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVD------------- 135
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHS 167
+ + ++ + HT DV + W P +LAS S DN + ++ C A L GH+
Sbjct: 136 -EEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHT 194
Query: 168 SLVKGVAWDPIGSFIASQSDDKTVIIWR 195
S V G+ +DP G +AS SDD+TV IW+
Sbjct: 195 STVWGLTFDPSGQRLASCSDDRTVKIWK 222
Score = 158 (60.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 47/162 (29%), Positives = 73/162 (45%)
Query: 62 LRD-HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
L+D H +V V W+ G Y+AS S D I +KK ++++
Sbjct: 56 LQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKN---------------DDFECLTV 100
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVAWDP 177
L GH +V + W+P + LA+ S D ++ IW + C +V+ H+ VK V W P
Sbjct: 101 LEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHP 160
Query: 178 IGSFIASQSDDKTVIIWRTSD--WSLAHRTDGHWAKSLGSTF 217
+AS S D V +++ D W +GH + G TF
Sbjct: 161 TQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF 202
Score = 151 (58.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/89 (39%), Positives = 47/89 (52%)
Query: 113 ENWKVAMTLR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSL 169
++W+ L+ GH V + WSP + LAS S D T IW C VL GH +
Sbjct: 48 DSWECKTVLQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENE 107
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
VK VAW P G+ +A+ S DK+V IW +
Sbjct: 108 VKCVAWAPSGNQLATCSRDKSVWIWEVDE 136
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/210 (26%), Positives = 82/210 (39%)
Query: 133 WSPDDSILASGSLDNTIHIWNMS--TGICTAVLR-GHSSLVKGVAWDPIGSFIASQSDDK 189
W+P ++LAS D I IW + C VL+ GH V+ VAW P G+++AS S D
Sbjct: 24 WNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASFDA 83
Query: 190 TVIIWR--TSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLE 247
T IW+ D+ +GH + + W+P G+ + T K V E
Sbjct: 84 TTCIWKKKNDDFECLTVLEGH------ENEVKCVAWAPSGNQLATCSR-DKSVWIWEVDE 136
Query: 248 RGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE----VKAAPVGWT-----NG-TSK 297
E+ H + V ++ + S S K W G TS
Sbjct: 137 EDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTST 196
Query: 298 IGGKESQPYNV-IAIGSQDRTITVWTTASP 326
+ G P +A S DRT+ +W P
Sbjct: 197 VWGLTFDPSGQRLASCSDDRTVKIWKECQP 226
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 49/197 (24%), Positives = 78/197 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++ + P + AT D V IW + E DE ++ + H V
Sbjct: 104 HEN-EVKCVAWAPSGNQLATCSRDKSVWIWEVD------EEDE--YECVSVVNSHTQDVK 154
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
V W +AS S D + +++++ ++W+ TL GHT+ V
Sbjct: 155 HVVWHPTQELLASCSYDNNVCVYKEED---------------DDWECRATLEGHTSTVWG 199
Query: 131 LNWSPDDSILASGSLDNTIHIWN-------MSTGI-CTAVLRG-HSSLVKGVAWDPIGSF 181
L + P LAS S D T+ IW T C L G H V +AW P+
Sbjct: 200 LTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGA 259
Query: 182 IASQSDDKTVIIWRTSD 198
+A+ D V +++ +
Sbjct: 260 LATACGDDGVRVFKEDE 276
Score = 62 (26.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 295 TSKIGGKESQPYNV-IAIGSQDRTITVWTTASP--------RPLFVAKHFFTQSVVDLSW 345
TS + G P +A S DRT+ +W P + + F ++V D++W
Sbjct: 194 TSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAW 253
Query: 346 SP-DGYSLFACSLDG 359
P G AC DG
Sbjct: 254 CPLTGALATACGDDG 268
Score = 48 (22.0 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 337 TQSVVDLSWSPDGYSLFACSLDGTV 361
T +V L++ P G L +CS D TV
Sbjct: 194 TSTVWGLTFDPSGQRLASCSDDRTV 218
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 183 (69.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 83/345 (24%), Positives = 147/345 (42%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D ST+ T + H V + W+ G+ +ASG + IL+ + P +G
Sbjct: 143 DLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWD--PSTGK---------- 190
Query: 112 IENWKVAMTLRGHTADVVDLNW-----SPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
+V L GH+ + L+W +P+ +AS S D ++ +W+ + G C L GH
Sbjct: 191 ----QVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGH 246
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSLG-STFFR-RLG 222
+ V + W G + S S D+T+ +WR D L GH W ++ ST + R G
Sbjct: 247 AQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTG 305
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVL-ERGEWAATFDFLGHNAP--IIVVKFNHSMFRRNS 278
+ P + Q R S L ER + ++ + P ++ + ++F +
Sbjct: 306 AFEPAEASVNA----QDLRGSLQELKERA--LSRYNLVRGQGPERLVSGSDDFTLFLWSP 359
Query: 279 ASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQ 338
A ++ A G +++ S VIA S D++I +W + + L +
Sbjct: 360 AEDKKPLARMTGHQALINQV--VFSPDSRVIASASFDKSIKLWDGRTGKYL-ASLRGHVA 416
Query: 339 SVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDEL 383
+V ++WS D L + S D T+ + + ++L L DE+
Sbjct: 417 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLP-GHADEV 460
Score = 161 (61.7 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH A V + WS D +L SGS D+T+ +W++ + L GH+ V V W
Sbjct: 406 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDW 465
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G +AS DK + IWR
Sbjct: 466 SPDGQRVASGGKDKCLRIWR 485
Score = 151 (58.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 99 SGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI 158
SG+ +F E+ K + GH A + + +SPD ++AS S D +I +W+ TG
Sbjct: 347 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGK 406
Query: 159 CTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
A LRGH + V +AW + S S D T+ +W L+ GH A + +
Sbjct: 407 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGH-ADEVYA--- 462
Query: 219 RRLGWSPCGHFITT 232
+ WSP G + +
Sbjct: 463 --VDWSPDGQRVAS 474
Score = 141 (54.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+L GH+ V+ + +SP LASGS D T+ W++ST +GH V ++W P G
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRT-DGHWAKSLGSTFFRRLGWSP 225
+AS + +++W S R GH S + L W P
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGH------SKWITALSWEP 210
Score = 72 (30.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+G GD VR W++ + +F T + H V + W+
Sbjct: 118 VISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF-----------TCQGHRHWVLSISWS 166
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
G+ +ASG + IL+ + G
Sbjct: 167 PDGKKLASGCKNGQILLWDPSTG 189
Score = 57 (25.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
R ++L H +V V ++ G+Y+ASGS D +
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTV 139
Score = 56 (24.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ GS D T+ VW + + L V + WSPDG
Sbjct: 429 LLVSGSSDSTLKVWDVKAQK-LSTDLPGHADEVYAVDWSPDG 469
Score = 51 (23.0 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 313 SQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELG 372
SQDRTI VW A L V ++ S D Y+L + + A+ + ++L
Sbjct: 265 SQDRTIKVWR-AHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVN--AQDL- 319
Query: 373 HRLSDAELDELKRSRYGDVRGR 394
R S EL E SRY VRG+
Sbjct: 320 -RGSLQELKERALSRYNLVRGQ 340
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 175 (66.7 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 47/139 (33%), Positives = 65/139 (46%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I + TT K ++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTT-------------KTILS 55
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDPI 178
GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 56 -DGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
Query: 179 GSFIASQSDDKTVIIWRTS 197
G +A+ S DK+V IW +
Sbjct: 115 GGLLATCSRDKSVWIWEVA 133
Score = 155 (59.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 47/140 (33%), Positives = 66/140 (47%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM----STGICTAVLRGHSSLVKGVAW 175
L HT DV + W P +LAS S DNTI ++ S C A L H+S V + +
Sbjct: 143 VLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDD ++ IW+
Sbjct: 203 DATGERLVSCSDDTSLKIWQ 222
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 47 KNFEND--ESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTE 103
K F D +S +ATL H +V + + G + S SDD + I + PG+ +
Sbjct: 173 KMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPGN---D 229
Query: 104 FGSGEPPDIENWKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---- 158
G P WK T+ G H+ + D++W +++A+ D+ I I+ ++
Sbjct: 230 AGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKETSDSKRDE 289
Query: 159 -----CTAVLRGHSSLVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
TA H V V W+P+ G I S SDD T+ +W+ ++
Sbjct: 290 PTFEQLTAEEGAHDQDVNSVEWNPVVEGQLI-SCSDDGTIKVWKMTE 335
Score = 115 (45.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW + + +T DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITT 232
+ WSPCG ++ +
Sbjct: 64 EIRWSPCGQYLAS 76
Score = 49 (22.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 307 NVIAIGSQDRTITVW--TTASPR--PLF---VAKH-FFTQSVVDLSWSP--DGYSLFACS 356
N+IA D I ++ T+ S R P F A+ Q V + W+P +G L +CS
Sbjct: 265 NLIATACGDDGIRIFKETSDSKRDEPTFEQLTAEEGAHDQDVNSVEWNPVVEG-QLISCS 323
Query: 357 LDGTV 361
DGT+
Sbjct: 324 DDGTI 328
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 184 (69.8 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 64/258 (24%), Positives = 115/258 (44%)
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+E K T RGHTA++V L+++P +++A+GS+D T +W++ G LRGHS+ +
Sbjct: 164 VETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEII 223
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFIT 231
++++ G I + S D TV++W + GH A+ ++F W C +T
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASF----NWD-CSLILT 278
Query: 232 TTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQ-EVKAAPVG 290
G G+ AT GH+ I+ F+++ +AS+ +
Sbjct: 279 ---GSMDKTCKLWDATNGKCVATLT--GHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 291 WTNGTSKIGGKESQ-------PY-NVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVD 342
+K+ G E + P N + GS D+T +W + + L V + T +
Sbjct: 334 TRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGH-TDEIFS 392
Query: 343 LSWSPDGYSLFACSLDGT 360
+++ G + S D T
Sbjct: 393 CAFNYKGNIVITGSKDNT 410
Score = 164 (62.8 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 53/201 (26%), Positives = 90/201 (44%)
Query: 9 VRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGK-NFENDESTQRLLATLR-DHF 66
+R +I S+ R TG DH V +W+ + K N + A+ D
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCS 274
Query: 67 ----GSVN--CVRW-AKHGRYIAS--GSDDQVI---LIHEKKPGSGTTEFGSGEPPDIEN 114
GS++ C W A +G+ +A+ G DD+++ + K + + G+
Sbjct: 275 LILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334
Query: 115 WKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
K L GH ++ ++++P + L +GS D T IW+ TG C VL GH+ + A
Sbjct: 335 RKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCA 394
Query: 175 WDPIGSFIASQSDDKTVIIWR 195
++ G+ + + S D T IWR
Sbjct: 395 FNYKGNIVITGSKDNTCRIWR 415
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 74/323 (22%), Positives = 132/323 (40%)
Query: 28 FATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLR------DHF--GSVN--CVRWA-K 76
F TG D ++W+ S G+ E + ++ + D GS + C W+ +
Sbjct: 107 FITGSYDRTCKLWDTAS-GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE 165
Query: 77 HGR--YIASGSDDQVILIHEKKPGSGTTEFGSGEPP----DIENWKVAMTLRGHTADVVD 130
G+ + G +++ + P S GS + DI+N + TLRGH+A+++
Sbjct: 166 TGKCYHTFRGHTAEIVCL-SFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIIS 224
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L+++ + +GS D+T+ +W+ TG +L GH + + +++ S I + S DKT
Sbjct: 225 LSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKT 284
Query: 191 VIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGE 250
+W ++ GH + L S F G I T R + +
Sbjct: 285 CKLWDATNGKCVATLTGHDDEILDSCF------DYTGKLIATASADGTARIFSAATRK-- 336
Query: 251 WAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK----IGGKESQPY 306
A + GH I + FN + SS K A + W T + + G + +
Sbjct: 337 CIAKLE--GHEGEISKISFNPQGNHLLTGSSD--KTARI-WDAQTGQCLQVLEGHTDEIF 391
Query: 307 --------NVIAIGSQDRTITVW 321
N++ GS+D T +W
Sbjct: 392 SCAFNYKGNIVITGSKDNTCRIW 414
Score = 146 (56.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 67/286 (23%), Positives = 117/286 (40%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD-PIG 179
L+ H + ++ + S +GS D T +W+ ++G L GH ++V +A++ P G
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKP 239
IA+ S DKT +W H GH A+ + +F +P + T G
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF------NPQSTLVAT--GSMDT 199
Query: 240 RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK-- 297
++ GE + GH+A II + FN S R + S V W T +
Sbjct: 200 TAKLWDIQNGE--EVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV---VVWDADTGRKV 254
Query: 298 ---IGGK---ESQPYN----VIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWS 346
IG S +N +I GS D+T +W + + + + H ++D +
Sbjct: 255 NILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGH--DDEILDSCFD 312
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGHRLS--DAELDELKRSRYGD 390
G + S DGT F ++ +L + E+ ++ + G+
Sbjct: 313 YTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN 358
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 177 (67.4 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 61/229 (26%), Positives = 92/229 (40%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I + SG T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSL---SGNT------------WSTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDP 177
L GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR 113
Query: 178 IGSFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTH 234
G +A+ S DK+V IW + ++ A + H + +R+ W P + +
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAH------TQDVKRVVWHPTKDILASAS 167
Query: 235 GFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ A +W T H + + + F+ R S S +
Sbjct: 168 YDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDK 216
Score = 176 (67.0 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 52/140 (37%), Positives = 68/140 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST----GICTAVLRGHSSLVKGVAW 175
L HT DV + W P ILAS S DNTI ++ S CTA L H+S V + +
Sbjct: 143 VLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDDKT+ IWR
Sbjct: 203 DAEGDRLVSCSDDKTLKIWR 222
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 43/151 (28%), Positives = 68/151 (45%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD+ + I PG+ + G P WK
Sbjct: 188 ATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGN---DAGIATPDKQSVWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSS 168
TL G H+ + D++W ++A+G D+ I I+ ++ TA H
Sbjct: 245 CTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQ 304
Query: 169 LVKGVAWDP-IGSFIASQSDDKTVIIWRTSD 198
V V W+P + + S SDD T+ IW+ +D
Sbjct: 305 DVNAVEWNPAVAGQLISCSDDGTIKIWKVAD 335
Score = 130 (50.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 55/225 (24%), Positives = 89/225 (39%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS--TGICTAVLR-GHSSLVKGVAWD 176
TL+GH + + W P ++ AS D I +W++S T +L GH ++ + W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS 68
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSL-AHRT-DGH--------WAKSLG--STFFRRLG-- 222
P G ++AS S D T IW S + T +GH W++S G +T R
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
W G H+ V +R W T D L + +K MF + S
Sbjct: 129 IWEVAGDDEFECAAVLNA-HTQDV-KRVVWHPTKDILASASYDNTIK----MFAESQLDS 182
Query: 282 QEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASP 326
A + T +++ +++ S D+T+ +W P
Sbjct: 183 DWDCTATLSSHTSTVWSIDFDAEGDRLVSC-SDDKTLKIWRAYHP 226
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 54/219 (24%), Positives = 87/219 (39%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD--WSLAH-RTDGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + +W S WS +DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + GE+ GH + V ++ S
Sbjct: 64 EIRWSPCGQYLASA-SFDATT-AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 274 FRRNS------ASSQEVKAAPV--GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTA- 324
R S A E + A V T ++ ++ +++A S D TI ++ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK--DILASASYDNTIKMFAESQ 179
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S T +V + + +G L +CS D T+
Sbjct: 180 LDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTL 218
Score = 45 (20.9 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 308 VIAIGSQDRTITVW--TTASPR--PLF---VAKHF-FTQSVVDLSWSPD-GYSLFACSLD 358
+IA G D I ++ T+ S R P F A+ Q V + W+P L +CS D
Sbjct: 266 LIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDD 325
Query: 359 GTV 361
GT+
Sbjct: 326 GTI 328
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 177 (67.4 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 61/229 (26%), Positives = 92/229 (40%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I + SG T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSL---SGNT------------WSTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDP 177
L GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR 113
Query: 178 IGSFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTH 234
G +A+ S DK+V IW + ++ A + H + +R+ W P + +
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAH------TQDVKRVVWHPTKDILASAS 167
Query: 235 GFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ A +W T H + + + F+ R S S +
Sbjct: 168 YDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDK 216
Score = 176 (67.0 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 52/140 (37%), Positives = 68/140 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST----GICTAVLRGHSSLVKGVAW 175
L HT DV + W P ILAS S DNTI ++ S CTA L H+S V + +
Sbjct: 143 VLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDDKT+ IWR
Sbjct: 203 DAEGDRLVSCSDDKTLKIWR 222
Score = 135 (52.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 43/151 (28%), Positives = 67/151 (44%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD+ + I PG+ + G P WK
Sbjct: 188 ATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGN---DAGIATPDKQSVWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSS 168
TL G H+ + D++W ++A+G D+ I I+ ++ TA H
Sbjct: 245 CTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQ 304
Query: 169 LVKGVAWDP-IGSFIASQSDDKTVIIWRTSD 198
V V W+P + + S SDD T+ IW+ D
Sbjct: 305 DVNAVEWNPAVAGQLISCSDDGTIKIWKVDD 335
Score = 130 (50.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 55/225 (24%), Positives = 89/225 (39%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS--TGICTAVLR-GHSSLVKGVAWD 176
TL+GH + + W P ++ AS D I +W++S T +L GH ++ + W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS 68
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSL-AHRT-DGH--------WAKSLG--STFFRRLG-- 222
P G ++AS S D T IW S + T +GH W++S G +T R
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
W G H+ V +R W T D L + +K MF + S
Sbjct: 129 IWEVAGDDEFECAAVLNA-HTQDV-KRVVWHPTKDILASASYDNTIK----MFAESQLDS 182
Query: 282 QEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASP 326
A + T +++ +++ S D+T+ +W P
Sbjct: 183 DWDCTATLSSHTSTVWSIDFDAEGDRLVSC-SDDKTLKIWRAYHP 226
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 54/219 (24%), Positives = 87/219 (39%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD--WSLAH-RTDGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + +W S WS +DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + GE+ GH + V ++ S
Sbjct: 64 EIRWSPCGQYLASA-SFDATT-AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 274 FRRNS------ASSQEVKAAPV--GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTA- 324
R S A E + A V T ++ ++ +++A S D TI ++ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK--DILASASYDNTIKMFAESQ 179
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S T +V + + +G L +CS D T+
Sbjct: 180 LDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTL 218
Score = 45 (20.9 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 308 VIAIGSQDRTITVW--TTASPR--PLF---VAKHF-FTQSVVDLSWSPD-GYSLFACSLD 358
+IA G D I ++ T+ S R P F A+ Q V + W+P L +CS D
Sbjct: 266 LIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDD 325
Query: 359 GTV 361
GT+
Sbjct: 326 GTI 328
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 166 (63.5 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 52/180 (28%), Positives = 80/180 (44%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D ST+ T + H V + W+ G+ +ASG + I + + P +G
Sbjct: 155 DLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWD--PATGN---------- 202
Query: 112 IENWKVAMTLRGHTADVVDLNW-----SPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
++ L GH+ + L W +P+ LAS S D +I IW+ G C +L GH
Sbjct: 203 ----QIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGH 258
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSLG-ST-FFRRLG 222
+ V V W G + S S D+T+ +WR+ D L GH W ++ ST + R G
Sbjct: 259 TQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTG 317
Score = 154 (59.3 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH + V + WS D +L SGS D+T+ +W+ T L GH+ V W
Sbjct: 418 KYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDW 477
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G +AS DK + IWR
Sbjct: 478 SPDGQRVASGGKDKCLRIWR 497
Score = 153 (58.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 40/120 (33%), Positives = 56/120 (46%)
Query: 113 ENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKG 172
E+ K + GH A + + +SPD I+AS S D +I +W TG LRGH S V
Sbjct: 373 EDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQ 432
Query: 173 VAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
+AW + S S D T+ +W LA GH A + +T WSP G + +
Sbjct: 433 IAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGH-ADEVFAT-----DWSPDGQRVAS 486
Score = 143 (55.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+L GHT V+ + +SP LASGS D T+ W++ST +GH V +AW P G
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDG 181
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRT-DGH--WAKSL 213
+AS + + +W + + R GH W L
Sbjct: 182 KKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCL 218
Score = 71 (30.1 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+G GD VR W++ ST+ T + H V + W+
Sbjct: 130 VISVAFSPTGKYLASGSGDTTVRFWDL-----------STETPQFTAKGHRHWVLSIAWS 178
Query: 76 KHGRYIASGSDDQVILIHEKKPGS 99
G+ +ASG + I + + G+
Sbjct: 179 PDGKKLASGCKNSQIFLWDPATGN 202
Score = 68 (29.0 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 309 IAIGSQDRTITVWTTASPR-PLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A S+D +I +W T R + H TQSV + W DG L++ S D T+
Sbjct: 232 LASASKDGSIRIWDTLMGRCDKILTGH--TQSVTCVKWGGDGL-LYSSSQDRTI 282
Score = 65 (27.9 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
+IA S D++I +W + + L + +V ++WS D L + S D T+ + E
Sbjct: 399 IIASASFDKSIKLWEGRTGKYL-TSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAE 457
Query: 368 VKEL 371
K+L
Sbjct: 458 TKKL 461
Score = 61 (26.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 30/103 (29%), Positives = 40/103 (38%)
Query: 259 GHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK----IGGKESQPYNV------ 308
GH A I V F+ R AS+ K+ + W T K + G S Y +
Sbjct: 383 GHQALINQVLFSPDT--RIIASASFDKSIKL-WEGRTGKYLTSLRGHVSAVYQIAWSADS 439
Query: 309 --IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
+ GS D T+ VW A + L + V WSPDG
Sbjct: 440 RLLVSGSSDSTLKVWD-AETKKLAIDLPGHADEVFATDWSPDG 481
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 313 SQDRTITVWTTASP---RPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVK 369
SQDRTI VW + R L H+ V ++ S D Y L + + A + +
Sbjct: 277 SQDRTIKVWRSQDGILCRTLQGHAHW----VNTMALSTD-YVLRTGAFEPAEATIN--PQ 329
Query: 370 ELGHRLSDAELDELKRSRYGDVRGR 394
++ L AEL + + RY VRG+
Sbjct: 330 DMSGSL--AELKDKAQQRYDKVRGQ 352
Score = 44 (20.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 305 PYNVIAIGSQDRTITVWTTASPR-PLF-VAKHFFTQSVVD-LSWSPDGYSLFACSLDGTV 361
P +++ GS D T+ +W A + PL + H Q++++ + +SPD + + S D ++
Sbjct: 354 PERLVS-GSDDFTLFLWRPAEDKKPLERMTGH---QALINQVLFSPDTRIIASASFDKSI 409
Score = 40 (19.1 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 44 SVGKNFENDESTQRLLATLRDHFG 67
+V ++ E E +RLL RD G
Sbjct: 16 AVPQSMEPTEDVERLLIQFRDEAG 39
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 184 (69.8 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 43/119 (36%), Positives = 58/119 (48%)
Query: 94 EKKPGSGTTEFGSGEPPDIE--NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHI 151
E P T PP E N++ LRGH V + +SPD S++ASG D + +
Sbjct: 143 ETDPDRSPTPVPPPPPPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKV 202
Query: 152 WNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD--GH 208
W STG GH + + ++W P G+ IAS SDDKT+ +W AH T GH
Sbjct: 203 WAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGK-AHPTPFIGH 260
Score = 178 (67.7 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 81/317 (25%), Positives = 126/317 (39%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTL 121
LR H V+ VR++ IASG D + + G K+ T
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTG-----------------KLIYTF 214
Query: 122 RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAV-LRGHSSLVKGVAWDPIGS 180
GH A + ++WSPD + +ASGS D TI +WN+ TG GH + V +A+ P G+
Sbjct: 215 EGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN 274
Query: 181 FIASQSDDKTVIIW--RTSDW--SL-AHRT---------DGHWAKSLGSTFFRRLGWSPC 226
+ S S D+ V +W R++ SL AH DG S + R+ +
Sbjct: 275 MLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTST 334
Query: 227 GHFITT-THGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVK 285
G + T H P S G++ + L + + S+++
Sbjct: 335 GQCLRTLVHEDNPPVSSVKFSPNGKYVLAWT-LDDCVRLWDYVEGRCLKTYQGHSNKKYS 393
Query: 286 AAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLS 344
+ G S I G+ + Y GS+D I W + + L + H VD
Sbjct: 394 LSGAFGVYGQS-IPGR-TPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTC 451
Query: 345 WSPDGYSLFACSLDGTV 361
+ +G + +C LDGTV
Sbjct: 452 STGEGRFMVSCGLDGTV 468
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 47/146 (32%), Positives = 67/146 (45%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
ST +L+ T H ++ + W+ G IASGSDD+ I + G + P I
Sbjct: 206 STGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGK------AHPTPFI- 258
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKG- 172
GH V + +SP ++L SGS D + +W++ + L HS V G
Sbjct: 259 ---------GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGI 309
Query: 173 -VAWDPIGSFIASQSDDKTVIIWRTS 197
V WD G+ IAS + D V IW TS
Sbjct: 310 DVVWD--GTLIASCATDGLVRIWDTS 333
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 184 (69.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 48/152 (31%), Positives = 70/152 (46%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + + K
Sbjct: 353 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHS-------K 405
Query: 117 VAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T++ N P+ +I LAS S D+T+ +W++ G+C L H V VA+
Sbjct: 406 EIYTIKWSPTGPATSN--PNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAF 463
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T SL H G
Sbjct: 464 SPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 71/255 (27%), Positives = 112/255 (43%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM---STGICTA-VLR------GH- 166
A LRGH ++V W+P +LASGS D+T IWN+ S G T VLR GH
Sbjct: 175 ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHD 234
Query: 167 ---SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A+ S D IW T D +LA H K G F L W
Sbjct: 235 VPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQH--K--GPIF--ALKW 287
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G++I + G K GE F F H+AP + V + ++ + ++
Sbjct: 288 NKKGNYILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNTTFASCSTDMC 343
Query: 284 VKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPLF-VAKH 334
+ PV G T+++ + P ++ A S D T+ +W+ + + H
Sbjct: 344 IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAH 403
Query: 335 FFTQSVVDLSWSPDG 349
++ + + WSP G
Sbjct: 404 --SKEIYTIKWSPTG 416
Score = 133 (51.9 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 32/98 (32%), Positives = 43/98 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T +GHT +V + W P +LAS S D T+ IW+M C L+ HS + + W P G
Sbjct: 357 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 180 S---------FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS S D TV +W H H
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKH 454
Score = 113 (44.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 48/185 (25%), Positives = 73/185 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ +N N STQ +L +
Sbjct: 181 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNGGSTQLVLR---------H 226
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + T + E+ +A TL H +
Sbjct: 227 CIREGGHD--VPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFA 284
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 285 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMC 343
Query: 191 VIIWR 195
+ + R
Sbjct: 344 IHVCR 348
Score = 61 (26.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 470 LASGSFDKCVHIWNTQSGS--LVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 184 (69.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 48/152 (31%), Positives = 70/152 (46%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + + K
Sbjct: 353 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHS-------K 405
Query: 117 VAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T++ N P+ +I LAS S D+T+ +W++ G+C L H V VA+
Sbjct: 406 EIYTIKWSPTGPATSN--PNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAF 463
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T SL H G
Sbjct: 464 SPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 71/255 (27%), Positives = 112/255 (43%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM---STGICTA-VLR------GH- 166
A LRGH ++V W+P +LASGS D+T IWN+ S G T VLR GH
Sbjct: 175 ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHD 234
Query: 167 ---SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A+ S D IW T D +LA H K G F L W
Sbjct: 235 VPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQH--K--GPIF--ALKW 287
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G++I + G K GE F F H+AP + V + ++ + ++
Sbjct: 288 NKKGNYILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNTTFASCSTDMC 343
Query: 284 VKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPLF-VAKH 334
+ PV G T+++ + P ++ A S D T+ +W+ + + H
Sbjct: 344 IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAH 403
Query: 335 FFTQSVVDLSWSPDG 349
++ + + WSP G
Sbjct: 404 --SKEIYTIKWSPTG 416
Score = 133 (51.9 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 32/98 (32%), Positives = 43/98 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T +GHT +V + W P +LAS S D T+ IW+M C L+ HS + + W P G
Sbjct: 357 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 180 S---------FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS S D TV +W H H
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKH 454
Score = 113 (44.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 48/185 (25%), Positives = 73/185 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ +N N STQ +L +
Sbjct: 181 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNGGSTQLVLR---------H 226
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + T + E+ +A TL H +
Sbjct: 227 CIREGGHD--VPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFA 284
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 285 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMC 343
Query: 191 VIIWR 195
+ + R
Sbjct: 344 IHVCR 348
Score = 61 (26.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 470 LASGSFDKCVHIWNTQSGS--LVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 179 (68.1 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 50/150 (33%), Positives = 69/150 (46%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEP 109
+ DE + L L H V CV WA G +A+ S D+ + I E
Sbjct: 90 KTDEDFE-CLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVD------------- 135
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHS 167
+ + ++ + HT DV + W P +LAS S DN I I+ C A L GH
Sbjct: 136 -EEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYKEEDDDWECRATLEGHE 194
Query: 168 SLVKGVAWDPIGSFIASQSDDKTVIIWRTS 197
S V + +DP G +AS SDD+TV IW+ S
Sbjct: 195 STVWSLTFDPEGRRLASCSDDRTVKIWKES 224
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/158 (29%), Positives = 72/158 (45%)
Query: 65 HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGH 124
H +V V W+ G+Y+AS S D I +K T+ E+++ L GH
Sbjct: 60 HQRTVRKVAWSPCGKYLASASFDATTCIWKK------TD---------EDFECLTVLEGH 104
Query: 125 TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVAWDPIGSF 181
+V + W+P S+LA+ S D ++ IW + C +V+ H+ VK V W P
Sbjct: 105 ENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQEL 164
Query: 182 IASQSDDKTVIIWRTSD--WSLAHRTDGHWAKSLGSTF 217
+AS S D + I++ D W +GH + TF
Sbjct: 165 LASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTF 202
Score = 154 (59.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 113 ENWKVAMTLR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSL 169
++W+ L GH V + WSP LAS S D T IW + C VL GH +
Sbjct: 48 DSWECKCVLSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENE 107
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
VK VAW P GS +A+ S DK+V IW +
Sbjct: 108 VKCVAWAPSGSLLATCSRDKSVWIWEVDE 136
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 133 WSPDDSILASGSLDNTIHIWNMS--TGICTAVLR-GHSSLVKGVAWDPIGSFIASQSDDK 189
W+P + LA+ D I IW + C VL GH V+ VAW P G ++AS S D
Sbjct: 24 WNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPCGKYLASASFDA 83
Query: 190 TVIIWRTSDWSLAHRT--DGHWAKSLGSTFFRRLGWSPCGHFITT 232
T IW+ +D T +GH + + W+P G + T
Sbjct: 84 TTCIWKKTDEDFECLTVLEGH------ENEVKCVAWAPSGSLLAT 122
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 148 (57.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 115 WKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
+++ TL GH + + W+ LAS S D TI IW+ L+GH++ V +
Sbjct: 86 FRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSID 145
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
++P+G+ + S S D+TV IW D + H
Sbjct: 146 FNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAH 179
Score = 133 (51.9 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D E L+GHT V ++++P ++L SGS D T+ IWN+ G C +L HS +
Sbjct: 124 DFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPI 183
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
V+ G+ A+ S D IW
Sbjct: 184 ISVSISADGTLCATASYDGMARIW 207
Score = 129 (50.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 35/103 (33%), Positives = 46/103 (44%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
TL GH V ++ SP+ +A+ S D TI IW+ T L GH + V W
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
++AS SDDKT+ IW GH + S F LG
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGH-TNYVSSIDFNPLG 150
Score = 95 (38.5 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 26/82 (31%), Positives = 38/82 (46%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE + + V P AT D ++IW+ T RL TL H+ ++
Sbjct: 53 HE-KSVTCVSVSPNKRWIATSSSDGTIKIWSAL-----------TFRLECTLFGHYRGIS 100
Query: 71 CVRWAKHGRYIASGSDDQVILI 92
V+WA +Y+AS SDD+ I I
Sbjct: 101 QVKWATGSKYLASASDDKTIRI 122
Score = 59 (25.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 290 GWTNGTSKIGGKESQPYNVIAI-GSQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSP 347
G TN S I + P + + GS D T+ +W L + H ++ ++ +S S
Sbjct: 136 GHTNYVSSI---DFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAH--SEPIISVSISA 190
Query: 348 DGYSLFACSLDG 359
DG S DG
Sbjct: 191 DGTLCATASYDG 202
Score = 58 (25.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
+N+E+ TL H SV CV + + R+IA+ S D I I
Sbjct: 36 RNYESHSGFSEY-CTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKI 80
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 176 (67.0 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 51/140 (36%), Positives = 68/140 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM----STGICTAVLRGHSSLVKGVAW 175
L HT DV + W P ILAS S DNTI ++ + CTA L H+S + G+ +
Sbjct: 143 VLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDD TV IWR
Sbjct: 203 DADGERLVSCSDDTTVKIWR 222
Score = 175 (66.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 59/216 (27%), Positives = 88/216 (40%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I +G T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL---TGNT------------WSTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDP 177
L GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 54 LSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR 113
Query: 178 IGSFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTH 234
G +A+ S DK+V IW + ++ A + H + +R+ W P + +
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSH------TQDVKRVVWHPTKEILASAS 167
Query: 235 GFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN 270
+ A +W T H + I + F+
Sbjct: 168 YDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFD 203
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H ++ + + G + S SDD + I PG+ G P WK
Sbjct: 188 ATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSA---GVATPDQQTVWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSS 168
TL G H+ + D++W ++A+ D+ I I+ ++ TA H
Sbjct: 245 CTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQLTAEESAHDQ 304
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ ++
Sbjct: 305 DVNSVQWNPVVAGQLI-SCSDDGTIKIWKVTE 335
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 55/218 (25%), Positives = 84/218 (38%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD--WSLAH-RTDGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW + WS +DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + GE+ GH + V ++ S
Sbjct: 64 EIQWSPCGQYLASA-SFDATT-AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 274 FRRNS------ASSQEVKAAPVGWTNGTSKIGGKESQPYN-VIAIGSQDRTITVWTTA-- 324
R S A E + A V + T + P ++A S D TI ++
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAV-LNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPI 180
Query: 325 -SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ T ++ + + DG L +CS D TV
Sbjct: 181 DNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTV 218
Score = 45 (20.9 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSPD-GYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 304 QDVNSVQWNPVVAGQLISCSDDGTI 328
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 180 (68.4 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 83/317 (26%), Positives = 132/317 (41%)
Query: 97 PGSGTTEFGSGE-----PPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIH 150
PG+G + G PP + + M L GH +V + P+ S LAS D I
Sbjct: 33 PGAGQQQATPGALLQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 92
Query: 151 IWNMSTGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+W++ G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 93 LWSVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH 151
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVK 268
+ S + R G P + T G + + TF + ++ V
Sbjct: 152 -TSFVNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAIQTFQ---NTYQVLAVT 201
Query: 269 FNHSMFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTIT 319
FN + + N +++ + +T + S G S + + + D T+
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 320 VWTTA--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLDGTVANFH-FEVKEL 371
VW +P+ +F H F ++++ SWSPDG + A S D + +H V+ L
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSL 321
Query: 372 G----HRLSDAELDELK 384
G HRLS E D +K
Sbjct: 322 GQIPRHRLSRQE-DSVK 337
Score = 154 (59.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 44/142 (30%), Positives = 72/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ + +G D +
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--------SVYG-----DCD 101
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 102 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 158
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLW 180
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/209 (23%), Positives = 90/209 (43%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HEG +++ P A+ G D + +W++ N+ ATL+ H G+V
Sbjct: 66 HEG-EVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNY----------ATLKGHSGAVM 114
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGS------GTTEF-GSGEP----PD-------- 111
+ + G + S S D+ + + + + G G T F S P P
Sbjct: 115 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 112 --IENW----KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRG 165
++ W K A+ +T V+ + ++ + SG +DN I +W++ T +RG
Sbjct: 175 GTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
H+ V G++ GS++ S + D TV +W
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 169 (64.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 72/274 (26%), Positives = 109/274 (39%)
Query: 65 HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLR-G 123
H V V W+ +G +AS D+ I I K+ G+ W L G
Sbjct: 4 HEDRVWSVAWSPNGFVLASCGGDKTIRIWGKE----------GD-----KWICKTILEDG 48
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDPIGSF 181
H + L WSP + LAS S D T IW+ +G C A L GH + VK V W GS
Sbjct: 49 HQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSL 108
Query: 182 IASQSDDKTVIIWRTSD---WSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
+A+ DK+V IW + + A H + +++ W P + +
Sbjct: 109 LATCGRDKSVWIWEVQEDDEYECASVIHSH------TQDVKKVVWHPTKEILASCSYDDT 162
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEV----KAAPVGWTNG 294
+ + +W+ GH + + + F+ S R S S + K+ P G G
Sbjct: 163 IKLYKE--DEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEG 220
Query: 295 TSKIGGKESQPYNVIAI-GSQDRTI--TVWTTAS 325
+ GK ++ V + G DRTI W+ S
Sbjct: 221 VV-VSGKHTKWKCVCVLSGYHDRTIYDVHWSKVS 253
Score = 168 (64.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 59/192 (30%), Positives = 86/192 (44%)
Query: 9 VRHEGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF 66
+ +G Q I S+ P A+ D IW+ KS G+ FE + ATL H
Sbjct: 44 ILEDGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKS-GE-FECN-------ATLEGHE 94
Query: 67 GSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTA 126
V V W+ G +A+ D+ + I E + + + ++ A + HT
Sbjct: 95 NEVKSVDWSVSGSLLATCGRDKSVWIWEVQ--------------EDDEYECASVIHSHTQ 140
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGHSSLVKGVAWDPIGSFIAS 184
DV + W P ILAS S D+TI ++ C L GH S V +++D G I S
Sbjct: 141 DVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVS 200
Query: 185 QSDDKTVIIWRT 196
SDDKTV IW++
Sbjct: 201 CSDDKTVRIWKS 212
Score = 155 (59.6 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 54/208 (25%), Positives = 85/208 (40%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLR-GHSSLVKGVAWDP 177
+ GH V + WSP+ +LAS D TI IW IC +L GH ++ + W P
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSP 60
Query: 178 IGSFIASQSDDKTVIIW--RTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHG 235
G+F+AS S D T IW ++ ++ +GH + + WS G + T G
Sbjct: 61 CGTFLASASFDATTCIWDQKSGEFECNATLEGH------ENEVKSVDWSVSGSLLATC-G 113
Query: 236 FQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEV----KAAPVGW 291
K V E E+ H + V ++ + S S + K W
Sbjct: 114 RDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDW 173
Query: 292 TNGTSKIGGKESQPYNVIAIGSQDRTIT 319
+ + G ES +++ GS DR ++
Sbjct: 174 SC-CDTLEGHESTVWSISFDGSGDRIVS 200
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 45/161 (27%), Positives = 70/161 (43%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFG 105
K ++ DE TL H +V + + G I S SDD+ + I + PG+
Sbjct: 164 KLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVV 223
Query: 106 SGEPPDIENWKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG------- 157
SG+ WK L G H + D++WS ++A+ S D+ I I+ T
Sbjct: 224 SGKHT---KWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPS 280
Query: 158 --ICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWR 195
+ + HS V + W P + +A+ SDD TV +WR
Sbjct: 281 FQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLWR 321
Score = 52 (23.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 303 SQPYNVIAIGSQDRTITVWT--TASPR--PLF--VA--KHFFTQSVVDLSWSPDGYSLFA 354
S+ +IA S D I ++ T S R P F VA + + V + W P ++ A
Sbjct: 250 SKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILA 309
Query: 355 -CSLDGTVANFHFEVKE 370
CS DGTV + F E
Sbjct: 310 TCSDDGTVKLWRFTPAE 326
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 22/73 (30%), Positives = 30/73 (41%)
Query: 590 KASGSVAATTTTLSIRVFDKKEGED-NVPVC-LEARPREHAVNDIVGMGSTCMM-KETEI 646
K SG +A + IR+F + D N P L A R+ D+ S C K+ I
Sbjct: 251 KVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDV---NSICWHPKDENI 307
Query: 647 ACT---RGSQTLW 656
T G+ LW
Sbjct: 308 LATCSDDGTVKLW 320
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 194 (73.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 58/198 (29%), Positives = 90/198 (45%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ ++D + ATG D+ VR+WN+ N E ++ + + H SV V
Sbjct: 367 VLTLDSSEDGVWLATGAKDNTVRLWNL-----NIE--DNVYKCIHVFTGHTASVTAVALG 419
Query: 76 K---HG--RYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
+G ++AS S D+ + K+ G+ S D N + T++ H DV
Sbjct: 420 PLDVNGYPTFLASSSQDRTL----KRFNLGSQLNKS----DFSN-RAVWTIKAHDRDVNA 470
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
+ S D I+AS S D TI +W+ STG VLRGH V +++P +AS S D+T
Sbjct: 471 IQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRT 530
Query: 191 VIIWRTSDWSLAHRTDGH 208
+ IW +GH
Sbjct: 531 IRIWNVDTQQCVQTLEGH 548
Score = 169 (64.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 58/211 (27%), Positives = 90/211 (42%)
Query: 19 IDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHG 78
+DV A+ D ++ +N+ G + + R + T++ H VN ++ +K G
Sbjct: 421 LDVNGYPTFLASSSQDRTLKRFNL---GSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDG 477
Query: 79 RYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS 138
R IAS S D+ I + + G +V LRGH V +++P
Sbjct: 478 RIIASASQDKTIKLWDSSTG-----------------EVVGVLRGHRRGVWACSFNPFSR 520
Query: 139 ILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
LASGS D TI IWN+ T C L GH+ + + + G+ + S + D V +W S
Sbjct: 521 QLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSS 580
Query: 199 --------------WSLAHRTDGHWAKSLGS 215
W+LA R DG S G+
Sbjct: 581 GECVATLDNHEDRVWALASRFDGSLLVSGGA 611
Score = 155 (59.6 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 35/97 (36%), Positives = 56/97 (57%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS--ILASGSLDNTIHIWNMSTGICTAVLRGHSS 168
DI V + RGH + L + + +LASG+ D+ + +W++++ AV GHSS
Sbjct: 131 DIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSS 190
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT 205
+++G+ ++P GSF+ S S DKTV +W S A RT
Sbjct: 191 VIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRS-AVRT 226
Score = 138 (53.6 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 37/111 (33%), Positives = 50/111 (45%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D +V LRGH V +++P LASGS D TI IWN+ T C L GH+ +
Sbjct: 493 DSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAI 552
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH----WAKSLGSTF 217
+ + G+ + S + D V +W S D H WA L S F
Sbjct: 553 LKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWA--LASRF 601
Score = 120 (47.3 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST--GI--CTAVLRGHSSLVKGVAWD 176
L GHT V+ L+ S D LA+G+ DNT+ +WN++ + C V GH++ V VA
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 177 PIG-----SFIASQSDDKTV 191
P+ +F+AS S D+T+
Sbjct: 420 PLDVNGYPTFLASSSQDRTL 439
Score = 119 (46.9 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 31/104 (29%), Positives = 47/104 (45%)
Query: 97 PGSGTTEFGSGEPPDIENWKV-----AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHI 151
P S GSG+ I W V TL GHT ++ L + + + S + D + +
Sbjct: 517 PFSRQLASGSGDRT-IRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKV 575
Query: 152 WNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWR 195
W++S+G C A L H V +A GS + S D V +W+
Sbjct: 576 WSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWK 619
Score = 61 (26.5 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE + ++ + P ATGG + V++W++ + + R H G ++
Sbjct: 102 HE-TPVITMTIDPTNTLLATGGAEGLVKVWDIAGA-----------YVTHSFRGHGGVIS 149
Query: 71 CVRWAKHGR--YIASGSDD 87
+ + KH +ASG+DD
Sbjct: 150 ALCFGKHQNTWVLASGADD 168
Score = 56 (24.8 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFT---QSVVDLSWSP---DGYSLF--ACSLDGT 360
+A G++D T+ +W ++ H FT SV ++ P +GY F + S D T
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRT 438
Query: 361 VANFH 365
+ F+
Sbjct: 439 LKRFN 443
Score = 56 (24.8 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 303 SQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVA 362
S+ +IA SQD+TI +W +++ + V + + V S++P L + S D T+
Sbjct: 474 SKDGRIIASASQDKTIKLWDSSTGEVVGVLRGH-RRGVWACSFNPFSRQLASGSGDRTIR 532
Query: 363 NFHFEVKE 370
++ + ++
Sbjct: 533 IWNVDTQQ 540
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMK 43
I + +P +G D V++WN+K
Sbjct: 192 IRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Score = 40 (19.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 482 RPDGRKRIIPEAVGVPVQQEGVTG 505
RP G R+ + P Q +TG
Sbjct: 664 RPHGLLRLFERVMTAPHQPNSITG 687
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEV 368
+A+ S I V +T + +F T V+ L S DG L + D TV ++ +
Sbjct: 337 LAVCSNTEFIDVISTDGTQ-VFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNI 395
Query: 369 KE 370
++
Sbjct: 396 ED 397
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/152 (31%), Positives = 72/152 (47%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + +I K
Sbjct: 349 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDL-QAHSKEIYTIK 407
Query: 117 VAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
+ T G + +P+ +I LAS S D+T+ +W++ G+C L H V VA+
Sbjct: 408 WSPTGPGTS--------NPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAF 459
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 460 SPDGKYLASGSFDKCVHIWNTQSGTLVHSYRG 491
Score = 156 (60.0 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 69/255 (27%), Positives = 112/255 (43%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS----TGICTAVLR------GH- 166
A LRGH ++V W+P +LASGS D+T IWN++ +G VLR GH
Sbjct: 171 ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHD 230
Query: 167 ---SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A+ S D IW T D +LA H K G F L W
Sbjct: 231 VPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQH--K--GPIF--ALKW 283
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G++I + G K GE F F H+AP + V + ++ + ++
Sbjct: 284 NKKGNYILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNTTFASCSTDMC 339
Query: 284 VKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPLF-VAKH 334
+ PV G T+++ + P ++ A S D T+ +W+ + + H
Sbjct: 340 IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAH 399
Query: 335 FFTQSVVDLSWSPDG 349
++ + + WSP G
Sbjct: 400 --SKEIYTIKWSPTG 412
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 80/329 (24%), Positives = 125/329 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTL 121
LR H V W +ASGS D I S SG + + +
Sbjct: 174 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN-----SGSTQLV--LRHCIRE 226
Query: 122 RGHTA----DVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
GH DV L+W+ D ++LA+GS D IW G + L H + + W+
Sbjct: 227 GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNK 285
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITT 232
G++I S DKT IIW + H A +L +T F C H
Sbjct: 286 KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRL 345
Query: 233 THGFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAA 287
G +P H+ V +W + L + + +K SM + + +
Sbjct: 346 --GCDRPVKTFQGHTNEV-NAIKWDPSGMLLASCSDDMTLKI-WSMKQDTCVHDLQAHSK 401
Query: 288 PVGWTNGTSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLS 344
+ +T S G S P + ++A S D T+ +W + + KH + V ++
Sbjct: 402 EI-YTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKH--QEPVYSVA 458
Query: 345 WSPDGYSLFACSLDGTVANFHFEVKELGH 373
+SPDG L + S D V ++ + L H
Sbjct: 459 FSPDGKYLASGSFDKCVHIWNTQSGTLVH 487
Score = 114 (45.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 48/185 (25%), Positives = 73/185 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ +N N STQ +L +
Sbjct: 177 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNSGSTQLVLR---------H 222
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + T + E+ +A TL H +
Sbjct: 223 CIREGGHD--VPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFA 280
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 281 LKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMC 339
Query: 191 VIIWR 195
+ + R
Sbjct: 340 IHVCR 344
Score = 61 (26.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 466 LASGSFDKCVHIWNTQSGT--LVHSYRGTGGIFEVCWNARGDKVGASASDGSV 516
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 64/258 (24%), Positives = 117/258 (45%)
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+E K T RGHTA++V L+++P +++A+GS+D T +W++ +G L GHS+ +
Sbjct: 164 VETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEII 223
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFIT 231
++++ G+ I + S D TV +W + GH A+ + S F W C +T
Sbjct: 224 SLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAE-ISSAVFN---WD-CSLILT 278
Query: 232 TTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQ-EVKAAPVG 290
+ K + G+ AT GH+ I+ F+++ +AS+ +
Sbjct: 279 GS--MDKTCKLWDAVN-GKCVATLT--GHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 291 WTNGTSKIGGKESQ-------PY-NVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVD 342
+K+ G E + P N + GS D+T +W + + L V + T +
Sbjct: 334 TRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGH-TDEIFS 392
Query: 343 LSWSPDGYSLFACSLDGT 360
+++ G + S D T
Sbjct: 393 CAFNYKGDIIITGSKDNT 410
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 49/195 (25%), Positives = 86/195 (44%)
Query: 15 QIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDH------FGS 68
+I S+ R TG DH V +W + K + + + + + GS
Sbjct: 221 EIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGS 280
Query: 69 VN--CVRW-AKHGRYIAS--GSDDQVI---LIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
++ C W A +G+ +A+ G DD+++ + K + + G+ +
Sbjct: 281 MDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTK 340
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
L GH ++ ++++P + L +GS D T IW+ TG C VL GH+ + A++ G
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGD 400
Query: 181 FIASQSDDKTVIIWR 195
I + S D T IWR
Sbjct: 401 IIITGSKDNTCRIWR 415
Score = 157 (60.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 71/289 (24%), Positives = 115/289 (39%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD-PIG 179
LR H + ++ + S +GS D T +W+ ++G L GH ++V +A++ P G
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKP 239
IA+ S DKT +W H GH A+ + +F +P + T G
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF------NPQSTLVAT--GSMDT 199
Query: 240 RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK-- 297
++ GE F GH+A II + FN S R + S W T +
Sbjct: 200 TAKLWDIQSGE--EVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV---WEADTGRKV 254
Query: 298 ---IGGK---ESQPYN----VIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWS 346
IG S +N +I GS D+T +W + + + + H ++D +
Sbjct: 255 YTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGH--DDEILDSCFD 312
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRL 395
G + S DGT F +E +L E E+ + + RL
Sbjct: 313 YTGKLIATASADGTARIFSAATRECVTKLEGHE-GEISKISFNPQGNRL 360
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 75/324 (23%), Positives = 128/324 (39%)
Query: 28 FATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLR------DHF--GSVN--CVRWA-K 76
F TG D ++W+ S G+ E + ++ + D GS + C W+ +
Sbjct: 107 FITGSYDRTCKLWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE 165
Query: 77 HGR--YIASGSDDQVILIHEKKPGSGTTEFGSGEPP----DIENWKVAMTLRGHTADVVD 130
G+ + G +++ + P S GS + DI++ + TL GH+A+++
Sbjct: 166 TGKCYHTFRGHTAEIVCL-SFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIIS 224
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L+++ + + +GS D+T+ +W TG L GH + + ++ S I + S DKT
Sbjct: 225 LSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKT 284
Query: 191 VIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR-HSAPVLERG 249
+W + GH + L S F G I T R SA E
Sbjct: 285 CKLWDAVNGKCVATLTGHDDEILDSCF------DYTGKLIATASADGTARIFSAATRE-- 336
Query: 250 EWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSK----IGGKESQP 305
GH I + FN R + SS K A + W T + + G +
Sbjct: 337 ---CVTKLEGHEGEISKISFNPQGNRLLTGSSD--KTARI-WDAQTGQCLQVLEGHTDEI 390
Query: 306 YN--------VIAIGSQDRTITVW 321
++ +I GS+D T +W
Sbjct: 391 FSCAFNYKGDIIITGSKDNTCRIW 414
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 168 (64.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 44/131 (33%), Positives = 65/131 (49%)
Query: 90 ILIHEKKPGSGTT-EFGSGEPP----DIENWKVAMTLRGHTADVVDLNWSPDDSILASGS 144
IL + P S GSG+ D E TL+GH V+ ++WSPD + LA+ S
Sbjct: 155 ILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLATCS 214
Query: 145 LDNTIHIWNMSTGICT-AVLRGHSSLVKGVAWDPIGSF------IASQSDDKTVIIWRTS 197
+D T+ IW+ TG + L+GH+ V+G+AW+P+ + + S S D T IW +
Sbjct: 215 MDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVN 274
Query: 198 DWSLAHRTDGH 208
H GH
Sbjct: 275 TGRTEHVLSGH 285
Score = 163 (62.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 33/80 (41%), Positives = 42/80 (52%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K TLRGH A V ++S D +L + S D T+ +WN+ TG L GH V GV W
Sbjct: 446 KFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDW 505
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G + S DK V +WR
Sbjct: 506 SPDGQRVGSGGRDKAVRLWR 525
Score = 156 (60.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
++A + GH ++ +SP S LA+GS DNT IW+ TG L+GH+ V GV+
Sbjct: 143 RLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVS 202
Query: 175 WDPIGSFIASQSDDKTVIIW 194
W P G+ +A+ S DKTV IW
Sbjct: 203 WSPDGTRLATCSMDKTVRIW 222
Score = 146 (56.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 53/169 (31%), Positives = 76/169 (44%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G V V W+ G +A+ S D+ + I + + G + GS E W
Sbjct: 190 TLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGK---QVGS-ELKGHAKW----- 240
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP-IG 179
++G + + L W L S S D T IW ++TG VL GH V V W G
Sbjct: 241 VQGIAWEPLHL-WRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNG 299
Query: 180 SFIA-SQSDDKTVIIWRTSDWSLAH--RTDGHWAKSLG-ST-FFRRLGW 223
+ + + S DKTV +W +L H ++ HW L ST F R G+
Sbjct: 300 TGVVYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCRTGF 348
Score = 126 (49.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 32/105 (30%), Positives = 46/105 (43%)
Query: 123 GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
GH V + +SPD S++AS DN +WN G LRGH + V ++ +
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLL 470
Query: 183 ASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
+ S D T+ +W LA GH + G + WSP G
Sbjct: 471 VTASKDTTLKVWNVRTGKLATDLPGHEDEVYG------VDWSPDG 509
Score = 67 (28.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 24 GALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIA 82
G R + D RIW + + G+ T+ +L+ H GSV+CVRW A +G +
Sbjct: 255 GTPRLVSASKDFTARIWTVNT-GR-------TEHVLS---GHKGSVSCVRWGAGNGTGVV 303
Query: 83 -SGSDDQVILIHEKKPGS 99
+ S D+ + + + G+
Sbjct: 304 YTASHDKTVKVWDAVKGT 321
Score = 52 (23.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ S+D T+ VW + + L V + WSPDG
Sbjct: 469 LLVTASKDTTLKVWNVRTGK-LATDLPGHEDEVYGVDWSPDG 509
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
+A + H VN V ++ G IAS D + + G
Sbjct: 406 IARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDG 445
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 175 (66.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 59/216 (27%), Positives = 89/216 (41%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I +G+T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL---TGST------------WSTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDP 177
L GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR 113
Query: 178 IGSFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTH 234
G +A+ S DK+V IW + ++ A + H + +R+ W P + +
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSH------TQDVKRVVWHPTKEVLASAS 167
Query: 235 GFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN 270
+ A +W T H + I + F+
Sbjct: 168 YDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFD 203
Score = 171 (65.3 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 48/140 (34%), Positives = 68/140 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM----STGICTAVLRGHSSLVKGVAW 175
L HT DV + W P +LAS S DNTI ++ + CTA L H+S + G+ +
Sbjct: 143 VLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDD T+ IW+
Sbjct: 203 DADGERLVSCSDDTTIKIWK 222
Score = 129 (50.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 58/225 (25%), Positives = 86/225 (38%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM--STGICTAVLR-GHSSLVKGVAWD 176
TL+GH + + W P ++ AS D I IW++ ST +L GH ++ + W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRWS 68
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSL-AHRT-DGHWAKSLGSTFFRRLGWSPCGHFITTTH 234
P G ++AS S D T IW S + T +GH + + WS G + T
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGH------ENEVKSVSWSRSGGLLATCS 122
Query: 235 GFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSAS-SQEVKAA---PVG 290
K V E+ H + V ++ + SAS +K PV
Sbjct: 123 R-DKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVD 181
Query: 291 --W------TNGTSKIGGKESQPYNVIAIG-SQDRTITVWTTASP 326
W T+ TS I G + + S D TI +W P
Sbjct: 182 NDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHP 226
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 43/152 (28%), Positives = 67/152 (44%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H ++ + + G + S SDD I I + PG+ G P WK
Sbjct: 188 ATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSA---GVATPDQQTVWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSS 168
TL G H+ + D++W ++A+ D+ I I+ ++ TA H
Sbjct: 245 CTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQLTAEEGAHDQ 304
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ ++
Sbjct: 305 DVNSVQWNPVVAGQLI-SCSDDGTIKIWKVTE 335
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 56/218 (25%), Positives = 84/218 (38%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRT--SDWSLAH-RTDGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW S WS +DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + GE+ GH + V ++ S
Sbjct: 64 EIRWSPCGQYLASA-SFDATT-AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 274 FRRNS------ASSQEVKAAPVGWTNGTSKIGGKESQPYN-VIAIGSQDRTITVWT---T 323
R S A E + A V + T + P V+A S D TI ++
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAV-LNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPV 180
Query: 324 ASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ T ++ + + DG L +CS D T+
Sbjct: 181 DNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTI 218
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSPD-GYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 304 QDVNSVQWNPVVAGQLISCSDDGTI 328
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/152 (32%), Positives = 71/152 (46%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + N K
Sbjct: 403 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA------HN-K 455
Query: 117 VAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T++ N P+ +I LAS S D+T+ +W++ G+CT L H V VA+
Sbjct: 456 EIYTIKWSPTGPATSN--PNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAF 513
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 514 SPDGKYLASGSFDKCVHIWNTQSGNLVHSYRG 545
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 71/255 (27%), Positives = 111/255 (43%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM---STGICTA-VLR------GH- 166
A LRGH ++V W+P +LASGS D+T IWN+ S G T VLR GH
Sbjct: 225 ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHD 284
Query: 167 ---SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A+ S D IW T D +LA H K G F L W
Sbjct: 285 VPSNKDVTSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQH--K--GPIF--ALKW 337
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G++I + G K GE F F H+AP + V + ++ + ++
Sbjct: 338 NRKGNYILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNTTFASCSTDMC 393
Query: 284 VKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRPLF-VAKH 334
+ PV G T+++ + P ++ A S D T+ +W+ + + H
Sbjct: 394 IHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAH 453
Query: 335 FFTQSVVDLSWSPDG 349
+ + + WSP G
Sbjct: 454 --NKEIYTIKWSPTG 466
Score = 132 (51.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/98 (31%), Positives = 44/98 (44%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T +GHT +V + W P +LAS S D T+ IW+M +C L+ H+ + + W P G
Sbjct: 407 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTG 466
Query: 180 S---------FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS S D TV +W H H
Sbjct: 467 PATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKH 504
Score = 120 (47.3 bits), Expect = 0.00093, P = 0.00093
Identities = 71/256 (27%), Positives = 100/256 (39%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWS--------LAH--RTDGHWAK 211
VLRGH S V AW+P+ +AS S D T IW ++ S L H R GH
Sbjct: 227 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 212 SLGSTFFRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVK 268
S + L W+ G + T GF + E G A+T LG H PI +K
Sbjct: 287 S--NKDVTSLDWNTNGTLLATGSYDGFARIW-----TEDGNLAST---LGQHKGPIFALK 336
Query: 269 FNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYN-------------VIAIGSQD 315
+N + N S V + W T + K+ P++ A S D
Sbjct: 337 WNR---KGNYILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQNNTTFASCSTD 391
Query: 316 RTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRL 375
I V RP+ + T V + W P G L +CS D T+ + + + H L
Sbjct: 392 MCIHVCRLGCDRPVKTFQGH-TNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDL 450
Query: 376 S--DAELDELKRSRYG 389
+ E+ +K S G
Sbjct: 451 QAHNKEIYTIKWSPTG 466
Score = 112 (44.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 48/185 (25%), Positives = 73/185 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ +N N STQ +L +
Sbjct: 231 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNGGSTQLVLR---------H 276
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + T + E+ +A TL H +
Sbjct: 277 CIREGGHD--VPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFA 334
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 335 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMC 393
Query: 191 VIIWR 195
+ + R
Sbjct: 394 IHVCR 398
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 520 LASGSFDKCVHIWNTQSGN--LVHSYRGTGGIFEVCWNARGDKVGASASDGSV 570
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 146 (56.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/84 (38%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D ++ K RGH V + WS D L SGS D+T+ IW++ T L GH+ V
Sbjct: 422 DGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEV 481
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
V W P G +AS S D+ + IW
Sbjct: 482 YTVDWSPDGDRVASGSKDRLLRIW 505
Score = 139 (54.0 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 41/121 (33%), Positives = 58/121 (47%)
Query: 106 SGEPPDIENW------KVAMTLRGHTADVVDLNWSP----DDSI-LASGSLDNTIHIWNM 154
+G DI W ++ TL+GHT + L+W P + LAS S D+TI IW+
Sbjct: 200 AGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDT 259
Query: 155 STGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKS 212
+ L GH+ V + W G I S S D+TV ++ T+D L DGH W +
Sbjct: 260 ESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNT 318
Query: 213 L 213
L
Sbjct: 319 L 319
Score = 132 (51.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 34/111 (30%), Positives = 51/111 (45%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
+ A ++ GHT V++ +SPD S D T+ IW++ T T L+GH++ V VAW
Sbjct: 131 RCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAW 190
Query: 176 DPIGSFIASQSDDKTVIIW-RTSDWSLAHRTDGHWAKSLGSTFFRRLGWSP 225
P IA+ + + IW + L GH + F L W P
Sbjct: 191 SPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGH------TKFITGLSWEP 235
Score = 122 (48.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
P + ++ L GH + +++SPD AS S D +I +W+ +G RGH
Sbjct: 380 PSVTKTSISR-LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGA 438
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
V V W ++ S S D T+ IW + GH A + + + WSP G
Sbjct: 439 VYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGH-ADEVYT-----VDWSPDG 490
Score = 108 (43.1 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D E+ K M+L GHT V L W + ++ SGS D T+ ++N + G VL GH+ V
Sbjct: 258 DTESCKNLMSLSGHTMSVTCLKWG-GEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWV 316
Query: 171 KGVA 174
+A
Sbjct: 317 NTLA 320
Score = 95 (38.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM 154
DI+ K+ L GH +V ++WSPD +ASGS D + IW +
Sbjct: 464 DIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 86 (35.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 5 KPSWVRHEGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
K S R G Q I + P FA+ D +++W+ +S GK L
Sbjct: 384 KTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQS-GK----------FLGNF 432
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKK 96
R H G+V V W+ RY+ SGS D + I + K
Sbjct: 433 RGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIK 466
Score = 84 (34.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 21 VQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRY 80
+ P +R A+ D +RIW+ +S KN L +L H SV C++W G
Sbjct: 238 LNPKCVRLASSSKDSTIRIWDTESC-KN----------LMSLSGHTMSVTCLKWGGEG-L 285
Query: 81 IASGSDDQVILIHEKKPG 98
I SGS D+ + + G
Sbjct: 286 IYSGSQDRTVRVFNTTDG 303
Score = 74 (31.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
+A S+D TI +W T S + L ++ H T SV L W +G +++ S D TV F+
Sbjct: 245 LASSSKDSTIRIWDTESCKNLMSLSGH--TMSVTCLKWGGEGL-IYSGSQDRTVRVFN 299
Score = 62 (26.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 51 NDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
N T+ ++ L H +N V ++ GRY AS S D+ I + + + G
Sbjct: 379 NPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSG 426
Score = 60 (26.2 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 302 ESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDL-SWSPDGYSLFACSLDGT 360
+S+ ++ GS D T+ +W + + +++ Q +++L S+SPDG + S D +
Sbjct: 359 KSKGMEILISGSDDFTVIMWNPSVTKTS-ISRLTGHQQLINLVSFSPDGRYFASASFDKS 417
Query: 361 V 361
+
Sbjct: 418 I 418
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 312 GSQDRTITVWTTASPRPLFVAKHF--FTQSVVDLSWSPDGYSLFACSLD 358
GS+D T+ +W + + + K V + WSPDG + + S D
Sbjct: 454 GSKDSTLKIWDIKTKK---MEKELPGHADEVYTVDWSPDGDRVASGSKD 499
Score = 50 (22.7 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 310 AIGSQDRTITVWTTASPRPLFVAK-HFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEV 368
A S D++I +W S + F+ +V + WS D L + S D T+ + +
Sbjct: 410 ASASFDKSIKLWDGQSGK--FLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKT 467
Query: 369 KELGHRLSDAELDEL 383
K++ L DE+
Sbjct: 468 KKMEKELP-GHADEV 481
Score = 48 (22.0 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 23 PGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIA 82
P F + GGD VRIW++ + ST TL+ H V V W+ + IA
Sbjct: 150 PDGKGFVSVGGDTTVRIWDIYT---------STPT--HTLKGHTNWVLQVAWSPDSKKIA 198
Query: 83 S 83
+
Sbjct: 199 T 199
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 308 VIAIGSQDRTITVWTTASPR 327
+I GSQDRT+ V+ T R
Sbjct: 285 LIYSGSQDRTVRVFNTTDGR 304
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
D+ +R + GK ++ E QR+ + + V +K + SGSDD +++
Sbjct: 324 DYVLRTGSYDHTGKEYDTLEEAQRVAL---ERYNDVKAK--SKGMEILISGSDDFTVIM 377
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 137 (53.3 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
A GH V +N+SP +LASGS D T+ IW + + V R H++ V+ V +
Sbjct: 54 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS 113
Query: 178 IGSFIASQSDDKTVIIWRT 196
G + + SDDKTV +W T
Sbjct: 114 DGQSLVTASDDKTVKVWST 132
Score = 127 (49.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
P E+ + +GH V +++S + LASGS+D+T+ IW+M GH
Sbjct: 4 PSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDA 63
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIW 194
V V + P G +AS S DKTV IW
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIW 88
Score = 105 (42.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/104 (25%), Positives = 50/104 (48%)
Query: 99 SGTTEFGSGEPPDIENW-----KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN 153
SGT +G ++ W ++ + H+A V L++ P + L + S D+T+ I +
Sbjct: 198 SGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 154 MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTS 197
+ G L GH VA+ G + AS D+ V++W+++
Sbjct: 258 LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 77 (32.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 4 EKPSWVRH-EGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA 60
E PS RH +G + + +D A+G D + IW+MK + +
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR---------- 56
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
H +V CV ++ G +ASGS D+ + I
Sbjct: 57 -FTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 70 (29.7 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF 104
+ D S +R + H +V CV ++ + +++ASGS D ++I KP S F
Sbjct: 6 QEDPSLER---HFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF 57
Score = 60 (26.2 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQS--VVDLSWSPDGYSLFACSLDGTV 361
IA D T+ VW + R L +H+ S V LS+ P G L S D T+
Sbjct: 202 IAAAGMDNTVKVWDARTHRLL---QHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 86/318 (27%), Positives = 138/318 (43%)
Query: 67 GSVNCVRWAKHGRYIASGSDDQVILIHEKKPG---SGTTEFGSGEP----P-DI-ENWKV 117
G+V +R G + SGS + P S +T G+G P P DI EN ++
Sbjct: 289 GAVT-IRVGAQGNNVQSGSSNA----QSSAPSGTISSSTSGGAGTPAALVPMDIDENIEI 343
Query: 118 ----AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS---TGICTAVLR-----G 165
A LRGH ++V W+P +LASGS D+T IW+MS T VLR G
Sbjct: 344 PESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKG 403
Query: 166 HSSL-----VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRR 220
+ + V + W+ GS +A+ S D IW+T D LA H G F
Sbjct: 404 GAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKT-DGRLASTLGQH----KGPIF--A 456
Query: 221 LGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSAS 280
L W+ CG++I + G K + + + T F H+AP + V + + + ++
Sbjct: 457 LKWNKCGNYILSA-GVDK---TTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCST 512
Query: 281 SQEVKAAPVG-------WTNGTSKIGGKESQPYN-VIAIGSQDRTITVWTTASPRPLF-V 331
Q + +G + T+++ + P ++A S D T+ +W+ R +
Sbjct: 513 DQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDL 572
Query: 332 AKHFFTQSVVDLSWSPDG 349
H ++ + + WSP G
Sbjct: 573 QAH--SKEIYTIKWSPTG 588
Score = 181 (68.8 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 86/361 (23%), Positives = 137/361 (37%)
Query: 24 GALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIAS 83
G + +T GG + +N E ES R+L R H V W +AS
Sbjct: 316 GTISSSTSGGAGTPAALVPMDIDENIEIPESKARVL---RGHESEVFICAWNPSRDLLAS 372
Query: 84 GSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASG 143
GS D I + + T I+ + DV L+W+ D S+LA+G
Sbjct: 373 GSGDSTARIWDMSDAN-TNSNQLVLRHCIQKGGAEVP---SNKDVTSLDWNCDGSLLATG 428
Query: 144 SLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAH 203
S D IW + G + L H + + W+ G++I S DKT IIW S
Sbjct: 429 SYDGYARIWK-TDGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQ 487
Query: 204 RTDGHWAKSLGSTFFRRLGWSPCG---HFITTTHGFQKP-----RHSAPVLERGEWAATF 255
+ H A +L + ++ C G +P H+ V +W
Sbjct: 488 QFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEV-NAIKWCPQG 546
Query: 256 DFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYN--VIAIGS 313
L + + +K SM R + + + +T S G + P ++A S
Sbjct: 547 QLLASCSDDMTLKI-WSMNRDRCCHDLQAHSKEI-YTIKWSPTGPGTNNPNTNLILASAS 604
Query: 314 QDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELG 372
D T+ +W + + KH T+ V +++SPDG L + S D V + + +L
Sbjct: 605 FDSTVRLWDVERGSCIHTLTKH--TEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLV 662
Query: 373 H 373
H
Sbjct: 663 H 663
Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 46/158 (29%), Positives = 69/158 (43%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ T + H VN ++W G+ +AS SDD + I + +
Sbjct: 527 IKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWS-----------------MNRDRCC 569
Query: 119 MTLRGHTADVVDLNWSPD---------DSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
L+ H+ ++ + WSP + ILAS S D+T+ +W++ G C L H+
Sbjct: 570 HDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEP 629
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
V VA+ P G +AS S DK V IW T L H G
Sbjct: 630 VYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKG 667
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/216 (24%), Positives = 86/216 (39%)
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIA 183
H+A +D++W + + AS S D IH+ + +GH++ V + W P G +A
Sbjct: 492 HSAPALDVDWQTNQAF-ASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLA 550
Query: 184 SQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG--------HFITTTHG 235
S SDD T+ IW + H H +K + + + WSP G + I +
Sbjct: 551 SCSDDMTLKIWSMNRDRCCHDLQAH-SKEIYT-----IKWSPTGPGTNNPNTNLILASAS 604
Query: 236 FQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGT 295
F V ERG T H P+ V F+ ++ AS K + W+ T
Sbjct: 605 FDSTVRLWDV-ERGSCIHTLT--KHTEPVYSVAFSPD--GKHLASGSFDKCVHI-WSTQT 658
Query: 296 SKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV 331
++ + + + V +AS +FV
Sbjct: 659 GQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFV 694
Score = 121 (47.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 47/182 (25%), Positives = 70/182 (38%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFEN---DESTQRLLATLRDHFG 67
HE ++F P A+G GD RIW+M N Q+ A + +
Sbjct: 354 HES-EVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSN-K 411
Query: 68 SVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTAD 127
V + W G +A+GS D I K G ++A TL H
Sbjct: 412 DVTSLDWNCDGSLLATGSYDGYARIW-KTDG-----------------RLASTLGQHKGP 453
Query: 128 VVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
+ L W+ + + S +D T IW+ STG CT HS+ V W +F + +D
Sbjct: 454 IFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTD 513
Query: 188 DK 189
+
Sbjct: 514 QR 515
Score = 63 (27.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W+T + + V + T + ++ W+ G + A + DG+V
Sbjct: 642 LASGSFDKCVHIWSTQTGQ--LVHSYKGTGGIFEVCWNSKGTKVGASASDGSV 692
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 182 (69.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 66/222 (29%), Positives = 102/222 (45%)
Query: 10 RHEGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKN--FENDESTQRLLATLRDH 65
R EG + ++++ + L +G D VR+WN++ F S R L L
Sbjct: 386 RLEGHKEGVWAVKIHENTL--VSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPS 443
Query: 66 FGSVNCVRWAKHGR-YIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK----VAMT 120
+ V + + YI SGS D + + K P + + I+ W+ T
Sbjct: 444 RLIRHGVEIVEPDQPYIVSGSRDHTLRVW-KLPKNTDPPYLPDNTNSIDRWEKNPYFVHT 502
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
L GHT V ++ D IL SGS D++I IW +STG C LRGHS + V ++P +
Sbjct: 503 LIGHTDSVRTISGYGD--ILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERN 560
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGHWA-KSLGSTFFRRL 221
S S DK++ +W S + + +GH A +L + F RL
Sbjct: 561 ICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRL 602
Score = 50 (22.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 307 NVIAIGSQDRTITVWTTASPRPLFV 331
N + GS D TI +W + +PL V
Sbjct: 600 NRLISGSADSTIRIWDLNTGKPLMV 624
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 67/253 (26%), Positives = 110/253 (43%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D E+ + TL+GHT V D+++ ++LAS S D TI +W+ T C L GH V
Sbjct: 134 DFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNV 193
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
V + P G + S S DKT+ +W + GH + R++ S G I
Sbjct: 194 SCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGH------EDWVRKITVSEDGSCI 247
Query: 231 TTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVG 290
+ Q + V +GE AT+ H+ + + F+ + S + + P G
Sbjct: 248 ASCSNDQTIKTWNIV--KGECLATYR--EHSHVVECLAFSTANIIDIPGS---LLSTPEG 300
Query: 291 WTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPL--FVAKHFFTQSVVDLSWSPD 348
+ GG +A GS+D+TI +W A+ R L ++ + ++V + P
Sbjct: 301 KSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAV---RFHPC 357
Query: 349 GYSLFACSLDGTV 361
G L + D T+
Sbjct: 358 GKFLLSVGDDKTI 370
Score = 144 (55.7 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 140 LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
LA+GS D TI IW ++TG C A GH + V+ V + P G F+ S DDKT+ +W
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 131 (51.2 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
L GH + + + P S++ S S D TI +W+ +G L+GH++ V+ + +D G+
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS S D T+ +W + GH
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGH 189
Score = 66 (28.3 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
D T + TL H +V+CVR+ G + S S D+ I + E G
Sbjct: 176 DFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATG 222
Score = 52 (23.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
I S+ P + D +++W+ +S G+ FE TL+ H +V + +
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFES-GE-FER---------TLKGHTNAVQDIDFD 157
Query: 76 KHGRYIASGSDDQVI 90
K G +AS S D I
Sbjct: 158 KTGNLLASCSADLTI 172
Score = 52 (23.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 313 SQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
S+D+TI VW A+ + + H V ++ S DG + +CS D T+ ++
Sbjct: 209 SRDKTIKVWEAATGYCIKTLVGH--EDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 42 (19.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 17/74 (22%), Positives = 30/74 (40%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGS--GTTEFGSGEPPDIENWKVAM 119
L H +N V++ + S S+D I + + + G T + + DI+ K
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 120 TLRGHTADVVDLNW 133
L +AD+ W
Sbjct: 162 LLASCSADLTIKLW 175
Score = 40 (19.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 308 VIAIGSQDRTITVWTTASPR 327
++++G D+TI VW A R
Sbjct: 361 LLSVGD-DKTIRVWDIAQGR 379
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 174 (66.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 71/265 (26%), Positives = 102/265 (38%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I + SG T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQ---SGNT------------WTTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
L GH + ++ WSP LAS S D T IW+ C A L GH + VK V+W G
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKHE--CNATLEGHENEVKSVSWSQSG 111
Query: 180 SFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGF 236
+A+ S DK+V IW + ++ A + H + +R+ W P + +
Sbjct: 112 GLLATCSRDKSVWIWEVAGDDEFECAAVLNAH------TQDVKRVVWHPSKEILASASYD 165
Query: 237 QKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTS 296
+ A +W T H + + + F R S S T
Sbjct: 166 NTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEADGERLVSCSDDT-----------TL 214
Query: 297 KIGGKESQPYNVIAIGSQDRTITVW 321
KI + P N I + D+T TVW
Sbjct: 215 KIW-RAYHPGNEAGIATPDKT-TVW 237
Score = 168 (64.2 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 50/140 (35%), Positives = 67/140 (47%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 93 ATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 138
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST----GICTAVLRGHSSLVKGVAW 175
L HT DV + W P ILAS S DNTI ++ S CTA L H+S V + +
Sbjct: 139 VLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDF 198
Query: 176 DPIGSFIASQSDDKTVIIWR 195
+ G + S SDD T+ IWR
Sbjct: 199 EADGERLVSCSDDTTLKIWR 218
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 46/152 (30%), Positives = 67/152 (44%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD + I PG+ E G P WK
Sbjct: 184 ATLSSHTSTVWSIDFEADGERLVSCSDDTTLKIWRAYHPGN---EAGIATPDKTTVWKCV 240
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG---------ICTAVLRGHSS 168
T+ G H+ V D++W ++AS D+ I I+ S+ + TA H
Sbjct: 241 CTVAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDSKRDEPTFELLTAEESAHEQ 300
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ +
Sbjct: 301 DVNAVEWNPVTAGQLI-SCSDDGTIKIWKLQE 331
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 57/219 (26%), Positives = 89/219 (40%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW S + +T DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + + + E AT + GH + V ++ S
Sbjct: 64 EVRWSPCGEYLASA-SFDA---TTAIWSKHECNATLE--GHENEVKSVSWSQSGGLLATC 117
Query: 274 FRRNS------ASSQEVKAAPV--GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTA- 324
R S A E + A V T ++ S+ ++A S D TI ++ +
Sbjct: 118 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSK--EILASASYDNTIKMYAESA 175
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S T +V + + DG L +CS D T+
Sbjct: 176 LDSDWDCTATLSSHTSTVWSIDFEADGERLVSCSDDTTL 214
Score = 45 (20.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSP-DGYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 300 QDVNAVEWNPVTAGQLISCSDDGTI 324
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 185 (70.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 55/212 (25%), Positives = 96/212 (45%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE + + S+DV +G D IW++ E ES +A L H G ++
Sbjct: 423 HEDL-VMSVDVSADGKHIISGSRDKSAMIWDL-------EKKES----IAQLTGHTGVIS 470
Query: 71 CVRWAKH---GRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA--MTLRGHT 125
CV K + + SDD+ I + + G TT G+ ++ K++ +T H
Sbjct: 471 CVALPKKPSTSMFAITASDDRTIKLWK---GFSTTSSSGGDDSKKKDKKISASVTKIAHE 527
Query: 126 ADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQ 185
D+ ++ +P+D I A+ S D+ + +WN++ ++ H V V + PI +
Sbjct: 528 KDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTC 587
Query: 186 SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTF 217
S D T+ IW SD++ +GH L ++F
Sbjct: 588 SADGTIKIWSLSDYTCLKTLEGHKGSVLKASF 619
Score = 118 (46.6 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 36/116 (31%), Positives = 56/116 (48%)
Query: 84 GSDDQVILIHEKKPGSGTTEFGSGEPPDIE-NWKVAMTLRGHTADVVDLNWSPDDSILAS 142
G +D++I I + S E + N K A LRGH V+ ++ S D + S
Sbjct: 382 GYNDEIIDIKYINDDNIIVATNSNEIKTYDLNTKRAQVLRGHEDLVMSVDVSADGKHIIS 441
Query: 143 GSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD--PIGSFIA-SQSDDKTVIIWR 195
GS D + IW++ A L GH+ ++ VA P S A + SDD+T+ +W+
Sbjct: 442 GSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWK 497
Score = 104 (41.7 bits), Expect = 3.9e-05, Sum P(4) = 3.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 123 GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
G+ +++D+ + DD+I+ + + N I ++++T VLRGH LV V G I
Sbjct: 382 GYNDEIIDIKYINDDNIIVATN-SNEIKTYDLNTKRAQ-VLRGHEDLVMSVDVSADGKHI 439
Query: 183 ASQSDDKTVIIWRTSDW-SLAHRTDGH 208
S S DK+ +IW S+A T GH
Sbjct: 440 ISGSRDKSAMIWDLEKKESIAQLT-GH 465
Score = 64 (27.6 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ A SQD + +W + P+ K + V + +SP CS DGT+
Sbjct: 541 IFATASQDSYVKLWNVNNLEPITSIKAH-RRGVWHVEFSPIDQCFLTCSADGTI 593
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 8 WVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKS--VGKNFENDE 53
W HEG I ID+ A+ D V++W+++ NF++D+
Sbjct: 125 WKGHEG-PINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQHDD 171
Score = 55 (24.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 56 QRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF 104
Q L+ + H G +N + G +AS S D+ + + + + G T F
Sbjct: 119 QSLVKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNF 167
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
L +H ++ + ++ G+ + S D+V+
Sbjct: 207 LTNHLSQISGITFSNSGKELISSGRDKVL 235
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 49/152 (32%), Positives = 71/152 (46%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + N K
Sbjct: 395 RPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA------HN-K 447
Query: 117 VAMTLRGHTADVVDLNWSPDDSI-LASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T++ N P+ +I LAS S D+T+ +W++ G+CT L H V VA+
Sbjct: 448 EIYTIKWSPTGPATSN--PNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAF 505
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 506 SPDGRYLASGSFDKCVHIWNTQSGNLVHSYRG 537
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 75/262 (28%), Positives = 116/262 (44%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM---STGICTA-VLR-- 164
DI + K A LRGH ++V W+P +LASGS D+T IWN+ S G T VLR
Sbjct: 211 DIPSSK-ATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC 269
Query: 165 ----GH----SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGST 216
GH + V + W+ G+ +A+ S D IW T D +LA H K G
Sbjct: 270 IREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQH--K--GPI 324
Query: 217 FFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRR 276
F L W+ G++I + G K GE F F H+AP + V + ++M
Sbjct: 325 F--ALKWNRKGNYILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQNNMTFA 378
Query: 277 NSASSQEVKAA------PVGWTNG-TSKIGGKESQPYNVI-AIGSQDRTITVWTTASPRP 328
+ ++ + PV G T+++ + P ++ A S D T+ +W+
Sbjct: 379 SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVC 438
Query: 329 LF-VAKHFFTQSVVDLSWSPDG 349
+ + H + + + WSP G
Sbjct: 439 IHDLQAH--NKEIYTIKWSPTG 458
Score = 133 (51.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T +GHT +V + W P +LAS S D T+ IW+M +C L+ H+ + + W P G
Sbjct: 399 TFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTG 458
Query: 180 S---------FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
+AS S D TV +W H H + + S F SP G ++
Sbjct: 459 PATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKH-QEPVYSVAF-----SPDGRYL 512
Query: 231 TTTHGFQKPRH 241
+ F K H
Sbjct: 513 ASG-SFDKCVH 522
Score = 120 (47.3 bits), Expect = 0.00091, P = 0.00091
Identities = 71/256 (27%), Positives = 100/256 (39%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWS--------LAH--RTDGHWAK 211
VLRGH S V AW+P+ +AS S D T IW ++ S L H R GH
Sbjct: 219 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 278
Query: 212 SLGSTFFRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVK 268
S + L W+ G + T GF + E G A+T LG H PI +K
Sbjct: 279 S--NKDVTSLDWNTNGTLLATGSYDGFARIW-----TEDGNLAST---LGQHKGPIFALK 328
Query: 269 FNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYN-------------VIAIGSQD 315
+N + N S V + W T + K+ P++ A S D
Sbjct: 329 WNR---KGNYILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQNNMTFASCSTD 383
Query: 316 RTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRL 375
I V RP+ + T V + W P G L +CS D T+ + + + H L
Sbjct: 384 MCIHVCRLGCDRPVKTFQGH-TNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDL 442
Query: 376 S--DAELDELKRSRYG 389
+ E+ +K S G
Sbjct: 443 QAHNKEIYTIKWSPTG 458
Score = 111 (44.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 48/185 (25%), Positives = 73/185 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ +N N STQ +L +
Sbjct: 223 HES-EVFICAWNPVSDLLASGSGDSTARIWNLN---EN-SNGGSTQLVLR---------H 268
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R H + S D + + T + E+ +A TL H +
Sbjct: 269 CIREGGHD--VPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFA 326
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L W+ + + S +D T IW+ TG HS+ V W +F AS S D
Sbjct: 327 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMC 385
Query: 191 VIIWR 195
+ + R
Sbjct: 386 IHVCR 390
Score = 62 (26.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 512 LASGSFDKCVHIWNTQSGN--LVHSYRGTGGIFEVCWNARGDKVGASASDGSV 562
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 173 (66.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 48/140 (34%), Positives = 64/140 (45%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I +G T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL---TGNT------------WSTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDP 177
L GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR 113
Query: 178 IGSFIASQSDDKTVIIWRTS 197
G +A+ S DK+V IW +
Sbjct: 114 SGGLLATCSRDKSVWIWEVA 133
Score = 169 (64.5 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 49/140 (35%), Positives = 68/140 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM----STGICTAVLRGHSSLVKGVAW 175
L HT DV + W P +LAS S DNTI ++ + CTA L H+S V G+ +
Sbjct: 143 VLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDD T+ IW+
Sbjct: 203 DADGERLVSCSDDTTIKIWK 222
Score = 138 (53.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 59/226 (26%), Positives = 89/226 (39%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS--TGICTAVLR-GHSSLVKGVAWD 176
TL+GH + + W P ++ AS D I IW+++ T +L GH ++ + W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWS 68
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSL-AHRT-DGH--------WAKSLG--STFFRRLG-- 222
P G ++AS S D T IW S + T +GH W++S G +T R
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
W G P H+ V +R W T D L + +K MF +
Sbjct: 129 IWEVAGDDEFECAAVLNP-HTQDV-KRVVWHPTKDVLASASYDNTIK----MFAEEPIDN 182
Query: 282 QEVKAAPVGWTNGTSKIGGKESQPYNVIAIG-SQDRTITVWTTASP 326
A + T+ TS + G + + S D TI +W P
Sbjct: 183 DWDCTATL--TSHTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHP 226
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H +V + + G + S SDD I I K G T G P WK
Sbjct: 188 ATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIW-KAYHPGNTA-GVATPEQQTVWKCVC 245
Query: 120 TLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSSL 169
T+ G H+ + D++W ++A+ D+ I I+ ++ TA H
Sbjct: 246 TVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQITAEEGAHDQD 305
Query: 170 VKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ S+
Sbjct: 306 VNSVQWNPVVAGQLI-SCSDDGTIKIWKVSE 335
Score = 119 (46.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 55/219 (25%), Positives = 86/219 (39%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD--WSLAH-RTDGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW + WS +DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + GE+ GH + V ++ S
Sbjct: 64 EIRWSPCGQYLASA-SFDATT-AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 274 FRRNS------ASSQEVKAAPV--GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTA- 324
R S A E + A V T ++ ++ +V+A S D TI ++
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--DVLASASYDNTIKMFAEEP 179
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ T +V + + DG L +CS D T+
Sbjct: 180 IDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTI 218
Score = 46 (21.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 555 GVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTTTLSIRVFDKKEGED 614
G TA E + K + +G + + K +G +A IR+F KE D
Sbjct: 227 GNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIF--KETSD 284
Query: 615 NVP 617
+ P
Sbjct: 285 SKP 287
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSPD-GYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 304 QDVNSVQWNPVVAGQLISCSDDGTI 328
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 179 (68.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 90 ILIHEKKPGSGTTEFGS-GEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
I H+ +GT + G D+ + M L GH ++ +N+SP+ +A+GS DNT
Sbjct: 371 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 430
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPI-GSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
+W++ C + H +LV GV ++PI G+F+ + + D T IW WS G
Sbjct: 431 CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAG 490
Query: 208 HWAKSLG 214
H K +G
Sbjct: 491 HEGKVMG 497
Score = 135 (52.6 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + + GH+ V D+ + D S+ +G LD +W++ TG C L GH +
Sbjct: 351 DLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 410
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
G+ + P G IA+ S D T +W
Sbjct: 411 YGINFSPNGYHIATGSGDNTCKVW 434
Score = 103 (41.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 120 TLRGHTADVVDLNWSPDDSI--------LASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
TLRGH +V + + P ++ LAS + D ++ +W++ + A + GH+ V
Sbjct: 268 TLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 327
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRT-SDWSLAHRTDGH 208
V W P G F+ + D++ +W + + H+ +GH
Sbjct: 328 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ-EGH 364
Score = 67 (28.6 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 298 IGGKESQPY--NVIAIGSQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSPDGYSLFA 354
+ G + +P N + G+ D T +WT PL +A H V+ L S DG +
Sbjct: 452 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH--EGKVMGLDISSDGQLIAT 509
Query: 355 CSLDGT 360
CS D T
Sbjct: 510 CSYDRT 515
Score = 48 (22.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 18 SIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKH 77
++ + P + A+ D V++W++ S DE +A + H V V W
Sbjct: 286 TVSLDPKDVNLASCAADGSVKLWSLDS-------DEP----VADIEGHTVRVARVMWHPS 334
Query: 78 GRYIASGSDDQ 88
GR++ + D+
Sbjct: 335 GRFLGTTCYDR 345
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D ++L S S D T+ IW++S+G C L+GHS+ V +
Sbjct: 52 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 111
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
+P + I S S D++V IW H + + + F R G
Sbjct: 112 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDG 157
Score = 157 (60.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 89 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 148
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 149 SAVHFNRDGSLIVSSSYDGLCRIWDTA 175
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/102 (34%), Positives = 48/102 (47%)
Query: 108 EPPDIE-NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGH 166
+P ++ N+ + TL GHT V + +SP+ LAS S D I IW G + GH
Sbjct: 1 QPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 60
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+ VAW + + S SDDKT+ IW S GH
Sbjct: 61 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 102
Score = 116 (45.9 bits), Expect = 0.00090, P = 0.00090
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 52 DESTQRLLATLRDHFGS-VNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPP 110
D ++ + L TL D V+ V+++ +G+YI + + D + + + G + +G
Sbjct: 173 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY-TGH-- 229
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
+N K + V W + SGS DN ++IWN+ T L+GH+ +V
Sbjct: 230 --KNEKYCIFAN---FSVTGGKW------IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 278
Query: 171 KGVAWDPIGSFIASQS--DDKTVIIWRT 196
A P + IAS + +DKT+ +W++
Sbjct: 279 ISTACHPTENIIASAALENDKTIKLWKS 306
Score = 61 (26.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 70
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ S SDD+ + I + G
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSG 93
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 173 (66.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 51/140 (36%), Positives = 68/140 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM----STGICTAVLRGHSSLVKGVAW 175
L HT DV + W P ILAS S DNTI ++ + CTA L H+S V G+ +
Sbjct: 143 VLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDD T+ IWR
Sbjct: 203 DADGERLVSCSDDTTIKIWR 222
Score = 173 (66.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 48/140 (34%), Positives = 64/140 (45%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I +G T W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL---TGNT------------WSTKTI 53
Query: 121 LR-GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDP 177
L GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR 113
Query: 178 IGSFIASQSDDKTVIIWRTS 197
G +A+ S DK+V IW +
Sbjct: 114 SGGLLATCSRDKSVWIWEVA 133
Score = 139 (54.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 59/226 (26%), Positives = 89/226 (39%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS--TGICTAVLR-GHSSLVKGVAWD 176
TL+GH + + W P ++ AS D I IW+++ T +L GH ++ + W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWS 68
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSL-AHRT-DGH--------WAKSLG--STFFRRLG-- 222
P G ++AS S D T IW S + T +GH W++S G +T R
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
W G P H+ V +R W T D L + +K MF +
Sbjct: 129 IWEVAGDDEFECAAVLNP-HTQDV-KRVVWHPTKDILASASYDNTIK----MFAEEPIDN 182
Query: 282 QEVKAAPVGWTNGTSKIGGKESQPYNVIAIG-SQDRTITVWTTASP 326
A + T+ TS + G + + S D TI +W P
Sbjct: 183 DWDCTATL--TSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHP 226
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 44/152 (28%), Positives = 66/152 (43%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD I I PG+ G P WK
Sbjct: 188 ATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTA---GVATPDQQTVWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSS 168
T+ G H+ + D++W ++A+ D+ I I+ S+ TA H
Sbjct: 245 CTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQ 304
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ ++
Sbjct: 305 DVNSVQWNPVVAGQLI-SCSDDGTIKIWKVTE 335
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSPD-GYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 304 QDVNSVQWNPVVAGQLISCSDDGTI 328
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 555 GVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTTTLSIRVFDKKEGED 614
G TA + + K + +G + + K +G +A IR+F KE D
Sbjct: 227 GNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIF--KESSD 284
Query: 615 NVP 617
+ P
Sbjct: 285 SKP 287
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 173 (66.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 57/215 (26%), Positives = 89/215 (41%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I S +T K ++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWST-------------KTILS 55
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDPI 178
GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 56 -DGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKS 114
Query: 179 GSFIASQSDDKTVIIWRTS---DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHG 235
G +A+ S DK+V IW + ++ A + H + +R+ W P + +
Sbjct: 115 GGLLATCSRDKSVWIWEVAGDDEFECAAVLNPH------TQDVKRVVWHPTKEILASASY 168
Query: 236 FQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN 270
+ A +W T H + + + F+
Sbjct: 169 DNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFD 203
Score = 172 (65.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 52/140 (37%), Positives = 67/140 (47%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W+K G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST----GICTAVLRGHSSLVKGVAW 175
L HT DV + W P ILAS S DNTI ++ S CTA L H+S V + +
Sbjct: 143 VLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDD T+ IWR
Sbjct: 203 DADGERLVSCSDDTTLKIWR 222
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 45/152 (29%), Positives = 66/152 (43%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD + I PG+ + G P WK
Sbjct: 188 ATLSSHTSTVWSIDFDADGERLVSCSDDTTLKIWRAYHPGN---DAGVATPDKQTVWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSS 168
TL G H+ + D++W ++A+ D+ I I+ S+ TA H
Sbjct: 245 CTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKRDEPTFEQVTAEESAHEQ 304
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ D
Sbjct: 305 DVNSVEWNPVMAGQLI-SCSDDGTIKIWKMLD 335
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 56/219 (25%), Positives = 87/219 (39%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW S S + +T DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + GE+ GH + V ++ S
Sbjct: 64 EIRWSPCGQYLASA-SFDATT-AIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATC 121
Query: 274 FRRNS------ASSQEVKAAPV--GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTA- 324
R S A E + A V T ++ ++ ++A S D TI ++ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--EILASASYDNTIKMFAESA 179
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S T +V + + DG L +CS D T+
Sbjct: 180 LDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDTTL 218
Score = 45 (20.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSPD-GYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 304 QDVNSVEWNPVMAGQLISCSDDGTI 328
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 172 (65.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 50/140 (35%), Positives = 68/140 (48%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
ATL H V V W++ G +A+ S D+ + I E +G EF + A
Sbjct: 97 ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV---AGDDEF-----------ECAA 142
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM----STGICTAVLRGHSSLVKGVAW 175
L HT DV + W P +LAS S DNTI ++ + CTA L H+S V G+ +
Sbjct: 143 VLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDF 202
Query: 176 DPIGSFIASQSDDKTVIIWR 195
D G + S SDD T+ IWR
Sbjct: 203 DADGERLVSCSDDTTIKIWR 222
Score = 172 (65.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 48/139 (34%), Positives = 68/139 (48%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL+ H G + V W G AS +D+ I I +G T +G+ K ++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSL---TGNT-WGT---------KTILS 55
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSLVKGVAWDPI 178
GH + ++ WSP LAS S D T IW+ S+G C A L GH + VK V+W
Sbjct: 56 -DGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
Query: 179 GSFIASQSDDKTVIIWRTS 197
G +A+ S DK+V IW +
Sbjct: 115 GGLLATCSRDKSVWIWEVA 133
Score = 141 (54.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 59/226 (26%), Positives = 89/226 (39%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST---GICTAVLRGHSSLVKGVAWD 176
TL+GH + + W P ++ AS D I IW+++ G T + GH ++ + W
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWS 68
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSL-AHRT-DGH--------WAKSLG--STFFRRLG-- 222
P G ++AS S D T IW S + T +GH W++S G +T R
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 223 -WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
W G P H+ V +R W T D L + +K MF +
Sbjct: 129 IWEVAGDDEFECAAVLNP-HTQDV-KRVVWHPTKDVLASASYDNTIK----MFAEEPIDN 182
Query: 282 QEVKAAPVGWTNGTSKIGGKESQPYNVIAIG-SQDRTITVWTTASP 326
A + T+ TS + G + + S D TI +W P
Sbjct: 183 DWDCTATL--TSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHP 226
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 44/152 (28%), Positives = 66/152 (43%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK-KPGSGTTEFGSGEPPDIENWKVA 118
ATL H +V + + G + S SDD I I PG+ G P WK
Sbjct: 188 ATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTA---GVATPEQQTVWKCV 244
Query: 119 MTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---------CTAVLRGHSS 168
T+ G H+ + D++W ++A+ D+ I I+ ++ TA H
Sbjct: 245 CTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQITAEEGAHDQ 304
Query: 169 LVKGVAWDPI--GSFIASQSDDKTVIIWRTSD 198
V V W+P+ G I S SDD T+ IW+ S+
Sbjct: 305 DVNSVQWNPVVAGQLI-SCSDDGTIKIWKVSE 335
Score = 116 (45.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 54/219 (24%), Positives = 86/219 (39%)
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGHWAKSLGSTFFR 219
L+GH + GVAW P G+ AS +DK + IW + + +T DGH R
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGH------KRTIR 63
Query: 220 RLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS------M 273
+ WSPCG ++ + F + GE+ GH + V ++ S
Sbjct: 64 EIRWSPCGQYLASA-SFDATT-AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 274 FRRNS------ASSQEVKAAPV--GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTA- 324
R S A E + A V T ++ ++ +V+A S D TI ++
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--DVLASASYDNTIKMFAEEP 179
Query: 325 --SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ T +V + + DG L +CS D T+
Sbjct: 180 IDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTI 218
Score = 46 (21.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 555 GVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTTTLSIRVFDKKEGED 614
G TA E + K + +G + + K +G +A IR+F KE D
Sbjct: 227 GNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIF--KETSD 284
Query: 615 NVP 617
+ P
Sbjct: 285 SKP 287
Score = 45 (20.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 338 QSVVDLSWSPD-GYSLFACSLDGTV 361
Q V + W+P L +CS DGT+
Sbjct: 304 QDVNSVQWNPVVAGQLISCSDDGTI 328
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 178 (67.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 66/249 (26%), Positives = 102/249 (40%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST-GICTAVLRGHSS 168
D+ K+ + L HT V DL ++PD S IL S S D T+ +W++ G VLRGH +
Sbjct: 156 DVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQN 215
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF---------- 218
V G A+ P S + S K V +W +S+ + +GH + F
Sbjct: 216 WVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPDGALLATAS 275
Query: 219 ---RRLGWSPCGHFITTTHGFQKPRHSAPVLERG---EWAATFDFLGHNAPIIVVKFNHS 272
R W P I G P + P+ G W + F H+ I +
Sbjct: 276 YDTRVYVWDPYIGVILREFGHLFPPPT-PIFAGGANDRWVRSVSF-SHDGLHIASLADDK 333
Query: 273 MFRRNSASSQ-EVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV 331
M R + V+ AP+ NG + +V+A G+QD ++ W T PR +
Sbjct: 334 MVRFWRIDEEYPVQVAPLN--NGLCCTFSTDG---SVLAAGTQDGSVHFWAT--PRQVSS 386
Query: 332 AKHFFTQSV 340
+H ++
Sbjct: 387 LQHLCRMAI 395
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 153 (58.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 32/80 (40%), Positives = 40/80 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K TLRGH V +S D +L S S D T+ +WN+ TG + L GH V V W
Sbjct: 438 KFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDW 497
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G + S DK + IWR
Sbjct: 498 SPDGQKVGSGGKDKAIRIWR 517
Score = 146 (56.5 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 49/163 (30%), Positives = 68/163 (41%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D T L TL+ H V V ++ +G IA+GS D + I + K G G P
Sbjct: 177 DCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQAL-----GAP-- 229
Query: 112 IENWKVAMTLRGHTADVVDLNWSP---DDS---ILASGSLDNTIHIWNMSTGICTAVLRG 165
L+GH + L W P S LAS S D+T+ IW++ + VL G
Sbjct: 230 ---------LKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSG 280
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
H V V W G S S D+T+ +W + +L H
Sbjct: 281 HKGSVTCVRWGGTGKIYTS-SHDRTIKVWNSQTGTLIQTLSAH 322
Score = 145 (56.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 116 KVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
+ + ++ GH ++ ++SP S + SGS D+T IW+ TG L+GH+S V V+
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDW-SLAHRTDGH--WAKSL 213
+ P G+ IA+ S D TV IW +L GH W SL
Sbjct: 199 YSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSL 240
Score = 130 (50.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
P+ + VA L GH +V + +SPD + +AS DN + +WN G LRGH
Sbjct: 391 PESSSKPVARLL-GHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGA 449
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
V + + S S D T+ +W L+ GH K F + WSP G
Sbjct: 450 VYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGH--KD--EVF--AVDWSPDG 501
Score = 74 (31.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 26/87 (29%), Positives = 37/87 (42%)
Query: 13 GMQIFSIDVQP-GALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNC 71
G I + P + +G GD RIW+ D T L TL+ H V
Sbjct: 148 GEAILATSFSPVSSSTMVSGSGDSTARIWDC---------DTGTP--LHTLKGHTSWVLA 196
Query: 72 VRWAKHGRYIASGSDDQVILIHEKKPG 98
V ++ +G IA+GS D + I + K G
Sbjct: 197 VSYSPNGAMIATGSMDNTVRIWDAKKG 223
Score = 62 (26.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 30/128 (23%), Positives = 56/128 (43%)
Query: 309 IAIGSQDRTITVWTTASPRP-LFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
+A S+D T+ +W S R + ++ H SV + W G ++ S D T+ ++ +
Sbjct: 255 LASASKDSTVRIWDVISKRADIVLSGH--KGSVTCVRWGGTG-KIYTSSHDRTIKVWNSQ 311
Query: 368 VKEL-------GHRLSDAEL--DELKRSRYGDVRGRL----ANLAETPAQLLLEAASAKE 414
L HR++ L D + R+ Y D G++ A+ + +AA+
Sbjct: 312 TGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINN 371
Query: 415 TTTKKVVS 422
+K+VS
Sbjct: 372 KIVEKLVS 379
Score = 61 (26.5 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW- 74
+ ++ P ATG D+ VRIW+ K G Q L A L+ H + + W
Sbjct: 194 VLAVSYSPNGAMIATGSMDNTVRIWDAKK-G---------QALGAPLKGHVKWITSLAWE 243
Query: 75 ------AKHGRYIASGSDDQVILI 92
+ H R +AS S D + I
Sbjct: 244 PYHLQQSGHPR-LASASKDSTVRI 266
Score = 48 (22.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
++ S+D T+ VW + + L V + WSPDG
Sbjct: 461 LLVSSSKDTTLKVWNVRTGK-LSEDLPGHKDEVFAVDWSPDG 501
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 179 (68.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 48/151 (31%), Positives = 70/151 (46%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + +I K
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDL-QAHNKEIYTIK 398
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD 176
+ T G + +L +LAS S D+T+ +W++ GIC L H V VA+
Sbjct: 399 WSPTGPGTSNPNANL-------MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFS 451
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 83/322 (25%), Positives = 134/322 (41%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PP 110
D+ Q+ A + N AK+G A+G ++ I + G E PP
Sbjct: 101 DKLAQQQAAAAAAAAAATNQQGSAKNGENTANGEENGAHTIANNHTDMMEVD-GDVEIPP 159
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS----TGICTAVLR-- 164
+ A+ LRGH ++V W+P +LASGS D+T IWN+S +G VLR
Sbjct: 160 N-----KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHC 214
Query: 165 ---GHSSL-----VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGST 216
G + V + W+ G+ +A+ S D IW T D +LA H K G
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQH--K--GPI 269
Query: 217 FFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRR 276
F L W+ G+FI + G K GE F F H+AP + V + +
Sbjct: 270 F--ALKWNKKGNFILSA-GVDKTTIIWDA-HTGEAKQLFPF--HSAPALDVDWQSNNTFA 323
Query: 277 NSASSQEVKAAPVG-------WTNGTSKIGGKESQPY-NVIAIGSQDRTITVWTTASPRP 328
+ ++ + +G + T+++ + P N++A S D T+ +W+
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 329 LF-VAKHFFTQSVVDLSWSPDG 349
+ + H + + + WSP G
Sbjct: 384 VHDLQAH--NKEIYTIKWSPTG 403
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 81/327 (24%), Positives = 123/327 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE--KKPGSGTTEFGSGEPPDIENWKVAM 119
LR H V W +ASGS D I + SG+T+ V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
DV L+W+ + ++LA+GS D IW G + L H + + W+ G
Sbjct: 225 N-----KDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTH 234
+FI S DKT IIW H A +L + F C H
Sbjct: 279 NFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL-- 336
Query: 235 GFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPV 289
G +P H+ V +W T + L + + +K SM + N + +
Sbjct: 337 GQDRPIKTFQGHTNEV-NAIKWDPTGNLLASCSDDMTLKI-WSMKQDNCVHDLQAHNKEI 394
Query: 290 GWTNGTSKIGGKESQPY-NV-IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWS 346
+T S G S P N+ +A S D T+ +W + + KH + V +++S
Sbjct: 395 -YTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH--QEPVYSVAFS 451
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGH 373
PDG L + S D V ++ + L H
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVH 478
Score = 144 (55.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 51 NDESTQRLLAT-LRDHFGSVNCVRWAKHGRYIASGSDDQ--VILIHEKKPGSGTTEFGSG 107
N E T LLAT D F + W K G ++ + + + K G+ G
Sbjct: 234 NSEGT--LLATGSYDGFARI----WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD 287
Query: 108 EPP---DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR 164
+ D + H+A +D++W +++ AS S D IH+ + +
Sbjct: 288 KTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS 224
GH++ V + WDP G+ +AS SDD T+ IW + H H K + + + WS
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH-NKEIYT-----IKWS 400
Query: 225 PCG 227
P G
Sbjct: 401 PTG 403
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 74/276 (26%), Positives = 104/276 (37%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD---GHWAKSLGSTF- 217
VLRGH S V AW+P+ +AS S D T IW S+ S + T H + G
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 218 ----FRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFN 270
L W+ G + T GF + + G A+T LG H PI +K+N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW-----TKDGNLAST---LGQHKGPIFALKWN 275
Query: 271 HSMFRRNSASSQEVKAAPVGW---TNGTSKIGGKESQPY--------NVIAIGSQDRTIT 319
+ N S V + W T ++ S P N A S D I
Sbjct: 276 K---KGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 320 VWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAE 379
V RP+ + T V + W P G L +CS D T+ + + H L A
Sbjct: 333 VCKLGQDRPIKTFQGH-TNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQ-AH 390
Query: 380 LDELKRSRYGDVRGRLANLAETPAQLLLEAASAKET 415
E+ ++ +N A L+L +AS T
Sbjct: 391 NKEIYTIKWSPTGPGTSN---PNANLMLASASFDST 423
Score = 112 (44.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 43/177 (24%), Positives = 71/177 (40%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ EN S L LR +
Sbjct: 168 HES-EVFICAWNPVSDLLASGSGDSTARIWNLS------ENSTSGSTQLV-LR------H 213
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R + G+ + S D + + + T + ++ +A TL H +
Sbjct: 214 CIR--EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFA 271
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
L W+ + + S +D T IW+ TG + HS+ V W +F + +D
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTD 328
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T + V + T + ++ W+ G + A + DG+V
Sbjct: 457 LASGSFDKCVHIWNTQTGA--LVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 39/112 (34%), Positives = 50/112 (44%)
Query: 97 PGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST 156
P S T+ S P N+ + TL GHT V + +SP+ LAS S D I IW
Sbjct: 19 PSSSATQ--SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 157 GICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
G + GH + VAW + + S SDDKT+ IW S GH
Sbjct: 77 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D ++L S S D T+ IW++S+G C L+GHS+ V +
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
+P + I S S D++V IW H + + + F R G
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDG 183
Score = 157 (60.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Score = 61 (26.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 96
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ S SDD+ + I + G
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSG 119
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 39/112 (34%), Positives = 50/112 (44%)
Query: 97 PGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST 156
P S T+ S P N+ + TL GHT V + +SP+ LAS S D I IW
Sbjct: 19 PSSSATQ--SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 157 GICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
G + GH + VAW + + S SDDKT+ IW S GH
Sbjct: 77 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D ++L S S D T+ IW++S+G C L+GHS+ V +
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
+P + I S S D++V IW H + + + F R G
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDG 183
Score = 157 (60.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Score = 61 (26.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 96
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ S SDD+ + I + G
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSG 119
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 39/112 (34%), Positives = 50/112 (44%)
Query: 97 PGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST 156
P S T+ S P N+ + TL GHT V + +SP+ LAS S D I IW
Sbjct: 19 PSSSATQ--SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 157 GICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
G + GH + VAW + + S SDDKT+ IW S GH
Sbjct: 77 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D ++L S S D T+ IW++S+G C L+GHS+ V +
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
+P + I S S D++V IW H + + + F R G
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDG 183
Score = 157 (60.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Score = 61 (26.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 96
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ S SDD+ + I + G
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSG 119
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 39/112 (34%), Positives = 50/112 (44%)
Query: 97 PGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST 156
P S T+ S P N+ + TL GHT V + +SP+ LAS S D I IW
Sbjct: 19 PSSSATQ--SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 157 GICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
G + GH + VAW + + S SDDKT+ IW S GH
Sbjct: 77 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D ++L S S D T+ IW++S+G C L+GHS+ V +
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
+P + I S S D++V IW H + + + F R G
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDG 183
Score = 157 (60.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Score = 61 (26.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 96
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ S SDD+ + I + G
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSG 119
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 38/112 (33%), Positives = 50/112 (44%)
Query: 97 PGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST 156
P + T+ S P N+ + TL GHT V + +SP+ LAS S D I IW
Sbjct: 19 PSAAATQ--SKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 157 GICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
G + GH + VAW + + S SDDKT+ IW S GH
Sbjct: 77 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D ++L S S D T+ IW++S+G C L+GHS+ V +
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
+P + I S S D++V IW H + + + F R G
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDG 183
Score = 157 (60.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Score = 61 (26.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 96
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ S SDD+ + I + G
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSG 119
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D ++L S S D T+ IW++S+G C L+GHS+ V +
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
+P + I S S D++V IW H + + + F R G
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDG 183
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/115 (33%), Positives = 50/115 (43%)
Query: 94 EKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWN 153
+ P S + S P N+ + TL GHT V + +SP+ LAS S D I IW
Sbjct: 16 QSTPSSSNNQ--SKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG 73
Query: 154 MSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
G + GH + VAW + + S SDDKT+ IW S GH
Sbjct: 74 AYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Score = 157 (60.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV 174
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL- 169
D++ K TL H+ V ++++ D S++ S S D IW+ ++G C L +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIW 194
V V + P G +I + + D T+ +W
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLW 241
Score = 65 (27.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
D S+ + L TL+ H V C + I SGS D+ + I + K G
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Score = 61 (26.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ S+ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 96
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
+ S SDD+ + I + G
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSG 119
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + +I K
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDL-QAHNKEIYTIK 398
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD 176
+ T G +L +LAS S D+T+ +W++ GIC L H V VA+
Sbjct: 399 WSPTGPGTNNPNANL-------MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFS 451
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 165 (63.1 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 83/322 (25%), Positives = 134/322 (41%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PP 110
D+ Q+ A + N AK+G A+G ++ I + G E PP
Sbjct: 101 DKLAQQQAAAAAAAAAATNQQGSAKNGENTANGEENGAHTIANNHTDMMEVD-GDVEIPP 159
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS----TGICTAVLR-- 164
+ A+ LRGH ++V W+P +LASGS D+T IWN+S +G VLR
Sbjct: 160 N-----KAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHC 214
Query: 165 ---GHSSL-----VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGST 216
G + V + W+ G+ +A+ S D IW T D +LA H K G
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQH--K--GPI 269
Query: 217 FFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRR 276
F L W+ G+FI + G K GE F F H+AP + V + +
Sbjct: 270 F--ALKWNKKGNFILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQSNNTFA 323
Query: 277 NSASSQEVKAAPVG-------WTNGTSKIGGKESQPY-NVIAIGSQDRTITVWTTASPRP 328
+ ++ + +G + T+++ + P N++A S D T+ +W+
Sbjct: 324 SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Query: 329 LF-VAKHFFTQSVVDLSWSPDG 349
+ + H + + + WSP G
Sbjct: 384 VHDLQAH--NKEIYTIKWSPTG 403
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 80/327 (24%), Positives = 124/327 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE--KKPGSGTTEFGSGEPPDIENWKVAM 119
LR H V W +ASGS D I + SG+T+ V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
DV L+W+ + ++LA+GS D IW G + L H + + W+ G
Sbjct: 225 N-----KDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTH 234
+FI S DKT IIW + H A +L + F C H
Sbjct: 279 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL-- 336
Query: 235 GFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPV 289
G +P H+ V +W T + L + + +K SM + N + +
Sbjct: 337 GQDRPIKTFQGHTNEV-NAIKWDPTGNLLASCSDDMTLKI-WSMKQDNCVHDLQAHNKEI 394
Query: 290 GWTNGTSKIGGKESQPY-NV-IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWS 346
+T S G + P N+ +A S D T+ +W + + KH + V +++S
Sbjct: 395 -YTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH--QEPVYSVAFS 451
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGH 373
PDG L + S D V ++ + L H
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVH 478
Score = 144 (55.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 51 NDESTQRLLAT-LRDHFGSVNCVRWAKHGRYIASGSDDQ--VILIHEKKPGSGTTEFGSG 107
N E T LLAT D F + W K G ++ + + + K G+ G
Sbjct: 234 NSEGT--LLATGSYDGFARI----WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD 287
Query: 108 EPP---DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR 164
+ D + H+A +D++W +++ AS S D IH+ + +
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS 224
GH++ V + WDP G+ +AS SDD T+ IW + H H K + + + WS
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH-NKEIYT-----IKWS 400
Query: 225 PCG 227
P G
Sbjct: 401 PTG 403
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 75/278 (26%), Positives = 105/278 (37%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD---GHWAKSLGSTF- 217
VLRGH S V AW+P+ +AS S D T IW S+ S + T H + G
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 218 ----FRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFN 270
L W+ G + T GF + + G A+T LG H PI +K+N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW-----TKDGNLAST---LGQHKGPIFALKWN 275
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPY-------------NVIAIGSQDRT 317
+ N S V + W T + K+ P+ N A S D
Sbjct: 276 K---KGNFILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSNNTFASCSTDMC 330
Query: 318 ITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSD 377
I V RP+ + T V + W P G L +CS D T+ + + H L
Sbjct: 331 IHVCKLGQDRPIKTFQGH-TNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQ- 388
Query: 378 AELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKET 415
A E+ ++ G N A L+L +AS T
Sbjct: 389 AHNKEIYTIKWSPT-GPGTN--NPNANLMLASASFDST 423
Score = 109 (43.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 43/177 (24%), Positives = 70/177 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ EN S L LR +
Sbjct: 168 HES-EVFICAWNPVSDLLASGSGDSTARIWNLS------ENSTSGSTQLV-LR------H 213
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R + G+ + S D + + + T + ++ +A TL H +
Sbjct: 214 CIR--EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFA 271
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
L W+ + + S +D T IW+ TG HS+ V W +F + +D
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD 328
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T + V + T + ++ W+ G + A + DG+V
Sbjct: 457 LASGSFDKCVHIWNTQTGA--LVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + +I K
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDL-QAHNKEIYTIK 398
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD 176
+ T G +L +LAS S D+T+ +W++ GIC L H V VA+
Sbjct: 399 WSPTGPGTNNPNANL-------MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFS 451
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 79/299 (26%), Positives = 127/299 (42%)
Query: 75 AKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAMTLRGHTADVVDLNW 133
AK+G A+G ++ I + G E PP+ A+ LRGH ++V W
Sbjct: 124 AKNGENTANGEENGAHTIANNHTDMMEVD-GDVEIPPN-----KAVVLRGHESEVFICAW 177
Query: 134 SPDDSILASGSLDNTIHIWNMS----TGICTAVLR-----GHSSL-----VKGVAWDPIG 179
+P +LASGS D+T IWN+S +G VLR G + V + W+ G
Sbjct: 178 NPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG 237
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKP 239
+ +A+ S D IW T D +LA H K G F L W+ G+FI + G K
Sbjct: 238 TLLATGSYDGFARIW-TKDGNLASTLGQH--K--GPIF--ALKWNKKGNFILSA-GVDKT 289
Query: 240 RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVG-------WT 292
GE F F H+AP + V + + + ++ + +G +
Sbjct: 290 TIIWDA-HTGEAKQQFPF--HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 293 NGTSKIGGKESQPY-NVIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDG 349
T+++ + P N++A S D T+ +W+ + + H + + + WSP G
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH--NKEIYTIKWSPTG 403
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 80/327 (24%), Positives = 124/327 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE--KKPGSGTTEFGSGEPPDIENWKVAM 119
LR H V W +ASGS D I + SG+T+ V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
DV L+W+ + ++LA+GS D IW G + L H + + W+ G
Sbjct: 225 N-----KDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTH 234
+FI S DKT IIW + H A +L + F C H
Sbjct: 279 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL-- 336
Query: 235 GFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPV 289
G +P H+ V +W T + L + + +K SM + N + +
Sbjct: 337 GQDRPIKTFQGHTNEV-NAIKWDPTGNLLASCSDDMTLKI-WSMKQDNCVHDLQAHNKEI 394
Query: 290 GWTNGTSKIGGKESQPY-NV-IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWS 346
+T S G + P N+ +A S D T+ +W + + KH + V +++S
Sbjct: 395 -YTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH--QEPVYSVAFS 451
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGH 373
PDG L + S D V ++ + L H
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVH 478
Score = 144 (55.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 51 NDESTQRLLAT-LRDHFGSVNCVRWAKHGRYIASGSDDQ--VILIHEKKPGSGTTEFGSG 107
N E T LLAT D F + W K G ++ + + + K G+ G
Sbjct: 234 NSEGT--LLATGSYDGFARI----WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD 287
Query: 108 EPP---DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR 164
+ D + H+A +D++W +++ AS S D IH+ + +
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS 224
GH++ V + WDP G+ +AS SDD T+ IW + H H K + + + WS
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH-NKEIYT-----IKWS 400
Query: 225 PCG 227
P G
Sbjct: 401 PTG 403
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 75/278 (26%), Positives = 105/278 (37%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD---GHWAKSLGSTF- 217
VLRGH S V AW+P+ +AS S D T IW S+ S + T H + G
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 218 ----FRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFN 270
L W+ G + T GF + + G A+T LG H PI +K+N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW-----TKDGNLAST---LGQHKGPIFALKWN 275
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPY-------------NVIAIGSQDRT 317
+ N S V + W T + K+ P+ N A S D
Sbjct: 276 K---KGNFILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSNNTFASCSTDMC 330
Query: 318 ITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSD 377
I V RP+ + T V + W P G L +CS D T+ + + H L
Sbjct: 331 IHVCKLGQDRPIKTFQGH-TNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQ- 388
Query: 378 AELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKET 415
A E+ ++ G N A L+L +AS T
Sbjct: 389 AHNKEIYTIKWSPT-GPGTN--NPNANLMLASASFDST 423
Score = 109 (43.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 43/177 (24%), Positives = 70/177 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ EN S L LR +
Sbjct: 168 HES-EVFICAWNPVSDLLASGSGDSTARIWNLS------ENSTSGSTQLV-LR------H 213
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R + G+ + S D + + + T + ++ +A TL H +
Sbjct: 214 CIR--EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFA 271
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
L W+ + + S +D T IW+ TG HS+ V W +F + +D
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD 328
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T + V + T + ++ W+ G + A + DG+V
Sbjct: 457 LASGSFDKCVHIWNTQTGA--LVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + +I K
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDL-QAHNKEIYTIK 398
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD 176
+ T G +L +LAS S D+T+ +W++ GIC L H V VA+
Sbjct: 399 WSPTGPGTNNPNANL-------MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFS 451
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 78/298 (26%), Positives = 126/298 (42%)
Query: 75 AKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWS 134
AK+G A+G ++ I + G E P + A+ LRGH ++V W+
Sbjct: 124 AKNGENTANGEENGAHTIANNHTDMMEVD-GDVEIPSNK----AVVLRGHESEVFICAWN 178
Query: 135 PDDSILASGSLDNTIHIWNMS----TGICTAVLR-----GHSSL-----VKGVAWDPIGS 180
P +LASGS D+T IWN+S +G VLR G + V + W+ G+
Sbjct: 179 PVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGT 238
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR 240
+A+ S D IW T D +LA H K G F L W+ G+FI + G K
Sbjct: 239 LLATGSYDGFARIW-TKDGNLASTLGQH--K--GPIF--ALKWNKKGNFILSA-GVDKTT 290
Query: 241 HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVG-------WTN 293
GE F F H+AP + V + + + ++ + +G +
Sbjct: 291 IIWDA-HTGEAKQQFPF--HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQG 347
Query: 294 GTSKIGGKESQPY-NVIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDG 349
T+++ + P N++A S D T+ +W+ + + H + + + WSP G
Sbjct: 348 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH--NKEIYTIKWSPTG 403
Score = 144 (55.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 51 NDESTQRLLAT-LRDHFGSVNCVRWAKHGRYIASGSDDQ--VILIHEKKPGSGTTEFGSG 107
N E T LLAT D F + W K G ++ + + + K G+ G
Sbjct: 234 NSEGT--LLATGSYDGFARI----WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD 287
Query: 108 EPP---DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR 164
+ D + H+A +D++W +++ AS S D IH+ + +
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS 224
GH++ V + WDP G+ +AS SDD T+ IW + H H K + + + WS
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH-NKEIYT-----IKWS 400
Query: 225 PCG 227
P G
Sbjct: 401 PTG 403
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 80/327 (24%), Positives = 123/327 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE--KKPGSGTTEFGSGEPPDIENWKVAM 119
LR H V W +ASGS D I + SG T+ V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
DV L+W+ + ++LA+GS D IW G + L H + + W+ G
Sbjct: 225 N-----KDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTH 234
+FI S DKT IIW + H A +L + F C H
Sbjct: 279 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL-- 336
Query: 235 GFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPV 289
G +P H+ V +W T + L + + +K SM + N + +
Sbjct: 337 GQDRPIKTFQGHTNEV-NAIKWDPTGNLLASCSDDMTLKI-WSMKQDNCVHDLQAHNKEI 394
Query: 290 GWTNGTSKIGGKESQPY-NV-IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWS 346
+T S G + P N+ +A S D T+ +W + + KH + V +++S
Sbjct: 395 -YTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH--QEPVYSVAFS 451
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGH 373
PDG L + S D V ++ + L H
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVH 478
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 75/278 (26%), Positives = 105/278 (37%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD---GHWAKSLGSTF- 217
VLRGH S V AW+P+ +AS S D T IW S+ S + T H + G
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVP 223
Query: 218 ----FRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFN 270
L W+ G + T GF + + G A+T LG H PI +K+N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW-----TKDGNLAST---LGQHKGPIFALKWN 275
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPY-------------NVIAIGSQDRT 317
+ N S V + W T + K+ P+ N A S D
Sbjct: 276 K---KGNFILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSNNTFASCSTDMC 330
Query: 318 ITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSD 377
I V RP+ + T V + W P G L +CS D T+ + + H L
Sbjct: 331 IHVCKLGQDRPIKTFQGH-TNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQ- 388
Query: 378 AELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKET 415
A E+ ++ G N A L+L +AS T
Sbjct: 389 AHNKEIYTIKWSPT-GPGTN--NPNANLMLASASFDST 423
Score = 108 (43.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 43/177 (24%), Positives = 70/177 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ EN S L LR +
Sbjct: 168 HES-EVFICAWNPVSDLLASGSGDSTARIWNLS------ENSTSGPTQLV-LR------H 213
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R + G+ + S D + + + T + ++ +A TL H +
Sbjct: 214 CIR--EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFA 271
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
L W+ + + S +D T IW+ TG HS+ V W +F + +D
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD 328
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T + V + T + ++ W+ G + A + DG+V
Sbjct: 457 LASGSFDKCVHIWNTQTGA--LVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K + + +I K
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDL-QAHNKEIYTIK 398
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD 176
+ T G +L +LAS S D+T+ +W++ GIC L H V VA+
Sbjct: 399 WSPTGPGTNNPNANL-------MLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFS 451
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 79/299 (26%), Positives = 127/299 (42%)
Query: 75 AKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAMTLRGHTADVVDLNW 133
AK+G A+G ++ I + G E PP+ A+ LRGH ++V W
Sbjct: 124 AKNGENTANGEENGAHTIANNHTDMMEVD-GDVEIPPN-----KAVVLRGHESEVFICAW 177
Query: 134 SPDDSILASGSLDNTIHIWNMS----TGICTAVLR-----GHSSL-----VKGVAWDPIG 179
+P +LASGS D+T IWN+S +G VLR G + V + W+ G
Sbjct: 178 NPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG 237
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKP 239
+ +A+ S D IW T D +LA H K G F L W+ G+FI + G K
Sbjct: 238 TLLATGSYDGFARIW-TKDGNLASTLGQH--K--GPIF--ALKWNKKGNFILSA-GVDKT 289
Query: 240 RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVG-------WT 292
GE F F H+AP + V + + + ++ + +G +
Sbjct: 290 TIIWDA-HTGEAKQQFPF--HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 293 NGTSKIGGKESQPY-NVIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDG 349
T+++ + P N++A S D T+ +W+ + + H + + + WSP G
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH--NKEIYTIKWSPTG 403
Score = 144 (55.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 48/183 (26%), Positives = 77/183 (42%)
Query: 51 NDESTQRLLAT-LRDHFGSVNCVRWAKHGRYIASGSDDQ--VILIHEKKPGSGTTEFGSG 107
N E T LLAT D F + W K G ++ + + + K G+ G
Sbjct: 234 NSEGT--LLATGSYDGFARI----WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD 287
Query: 108 EPP---DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR 164
+ D + H+A +D++W +++ AS S D IH+ + +
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS 224
GH++ V + WDP G+ +AS SDD T+ IW + H H K + + + WS
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH-NKEIYT-----IKWS 400
Query: 225 PCG 227
P G
Sbjct: 401 PTG 403
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 80/327 (24%), Positives = 123/327 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE--KKPGSGTTEFGSGEPPDIENWKVAM 119
LR H V W +ASGS D I + SG T+ V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
DV L+W+ + ++LA+GS D IW G + L H + + W+ G
Sbjct: 225 N-----KDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTH 234
+FI S DKT IIW + H A +L + F C H
Sbjct: 279 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL-- 336
Query: 235 GFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPV 289
G +P H+ V +W T + L + + +K SM + N + +
Sbjct: 337 GQDRPIKTFQGHTNEV-NAIKWDPTGNLLASCSDDMTLKI-WSMKQDNCVHDLQAHNKEI 394
Query: 290 GWTNGTSKIGGKESQPY-NV-IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWS 346
+T S G + P N+ +A S D T+ +W + + KH + V +++S
Sbjct: 395 -YTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH--QEPVYSVAFS 451
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGH 373
PDG L + S D V ++ + L H
Sbjct: 452 PDGRYLASGSFDKCVHIWNTQTGALVH 478
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 75/278 (26%), Positives = 105/278 (37%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD---GHWAKSLGSTF- 217
VLRGH S V AW+P+ +AS S D T IW S+ S + T H + G
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVP 223
Query: 218 ----FRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFN 270
L W+ G + T GF + + G A+T LG H PI +K+N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW-----TKDGNLAST---LGQHKGPIFALKWN 275
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPY-------------NVIAIGSQDRT 317
+ N S V + W T + K+ P+ N A S D
Sbjct: 276 K---KGNFILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSNNTFASCSTDMC 330
Query: 318 ITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSD 377
I V RP+ + T V + W P G L +CS D T+ + + H L
Sbjct: 331 IHVCKLGQDRPIKTFQGH-TNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQ- 388
Query: 378 AELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKET 415
A E+ ++ G N A L+L +AS T
Sbjct: 389 AHNKEIYTIKWSPT-GPGTN--NPNANLMLASASFDST 423
Score = 108 (43.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 43/177 (24%), Positives = 70/177 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ EN S L LR +
Sbjct: 168 HES-EVFICAWNPVSDLLASGSGDSTARIWNLS------ENSTSGPTQLV-LR------H 213
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R + G+ + S D + + + T + ++ +A TL H +
Sbjct: 214 CIR--EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFA 271
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
L W+ + + S +D T IW+ TG HS+ V W +F + +D
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD 328
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T + V + T + ++ W+ G + A + DG+V
Sbjct: 457 LASGSFDKCVHIWNTQTGA--LVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 154 (59.3 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K T+ GH + D+ WS D +L SGS D T+ +W +STG L+GHS+ V +
Sbjct: 105 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF 164
Query: 176 DPIGSFIASQSDDKTVIIW 194
+P + I S S D++V IW
Sbjct: 165 NPQSNLIVSGSFDESVRIW 183
Score = 149 (57.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
++ K TL+GH+ V N++P +++ SGS D ++ IW++ TG C L HS V
Sbjct: 142 ELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPV 201
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
V ++ GS I S S D IW T+
Sbjct: 202 SAVHFNRDGSLIVSSSYDGLCRIWDTA 228
Score = 148 (57.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 33/95 (34%), Positives = 43/95 (45%)
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ + TL GHT V + +SP+ LAS S D I IW G + GH + V
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 120
Query: 174 AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
AW + S SDDKT+ +W S GH
Sbjct: 121 AWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGH 155
Score = 71 (30.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ ++ P A+ D ++IW GK FE T+ H ++ V W+
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYD-GK-FEK---------TISGHKLGISDVAWS 123
Query: 76 KHGRYIASGSDDQVILIHEKKPG 98
R + SGSDD+ + + E G
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTG 146
>SGD|S000005564 [details] [associations]
symbol:HIR2 "Subunit of the HIR complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000417 "HIR complex" evidence=IDA;IPI] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IGI] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0031491 "nucleosome binding"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011494 InterPro:IPR015943 Pfam:PF07569 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000005564 GO:GO:0003714
EMBL:X87331 EMBL:BK006948 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006357 GO:GO:0016568
GO:GO:0006368 GO:GO:0006336 EMBL:U08849 GO:GO:0000417 EMBL:L03839
EMBL:Z74946 PIR:S62177 RefSeq:NP_014681.1 ProteinModelPortal:P32480
SMR:P32480 DIP:DIP-2366N IntAct:P32480 MINT:MINT-688992
STRING:P32480 PaxDb:P32480 EnsemblFungi:YOR038C GeneID:854203
KEGG:sce:YOR038C CYGD:YOR038c HOGENOM:HOG000112901 OMA:WAYGSQY
OrthoDB:EOG4J9R76 NextBio:976044 Genevestigator:P32480
GermOnline:YOR038C Uniprot:P32480
Length = 875
Score = 181 (68.8 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 55/174 (31%), Positives = 89/174 (51%)
Query: 303 SQPYNVIAI-GSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
S YN+IA GS D TI VW T +PLF A + ++ D+SWS DG++LFA S D T+
Sbjct: 287 STRYNLIATSGSTDGTILVWNTKRMKPLFNALQVSSTAINDMSWSQDGFTLFAISNDATL 346
Query: 362 ANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKVV 421
F F+ K+LG L E+ L+ +V +L L E A+ + ++ + +
Sbjct: 347 YTFAFQEKDLGVALPQTEIKSLQ-----EVNKKLPKLEEPLAEQI------PKSFPENIK 395
Query: 422 SDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKV-STSGRISSP 474
+ A AP+ + +IG + +P KK+ ++G+ + STS ++P
Sbjct: 396 LEESASAAPIPN--DIGRSAVGKKPTK---KKTANNQTNGIKTIQSTSMEFNTP 444
Score = 56 (24.8 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 653 QTLWSDRITGKVTVLAGNINFWAVGCEDGCLQVSKD 688
Q L+ D I +T+ FW+ EDG + + D
Sbjct: 544 QVLFQDFIPKLITICTAGDTFWSFCSEDGSIYIYSD 579
Score = 37 (18.1 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWR 195
S + G+ DP G + D+++++++
Sbjct: 165 SKPITGII-DPTGQTFTVMTSDRSILVYQ 192
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 164 (62.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 73/286 (25%), Positives = 117/286 (40%)
Query: 97 PGSGTTEFGSGE-----PPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIH 150
PG+G + G PP + + M L GH +V + P+ S LAS D I
Sbjct: 33 PGAGPQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 92
Query: 151 IWNMSTGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+WN+ G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 93 LWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH 151
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVK 268
+ S + R G P + T G + + TF + ++ V
Sbjct: 152 -TSFVNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAVQTFQ---NTYQVLAVT 201
Query: 269 FNHSMFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTIT 319
FN + + N +++ + +T + S G S + + + D T+
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 320 VWTTA--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLD 358
VW +P+ +F H F ++++ SWSPDG + A S D
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Score = 153 (58.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ +G D +
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--------YG-----DCD 101
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 102 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 158
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLW 180
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ T+RGH V L+ S + S L S ++DNT+ +W++ C + +G+
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W P GS IA+ S D+ V +W T+ + ++ GH A S+ F
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGH-AGSINEVAF 336
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/138 (26%), Positives = 64/138 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +L T+R H SV + + G Y+ S + D + + + +P + +
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ N++ + LR +WSPD S +A+GS D +++W+ ++ L GH+ +
Sbjct: 282 VHNFEKNL-LR--------CSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSIN 332
Query: 172 GVAWDPIGSFIASQSDDK 189
VA+ P I S S DK
Sbjct: 333 EVAFHPDEPIILSASSDK 350
Score = 121 (47.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF-GSV 69
HEG +++ P A+ G D + +WN+ N+ + + L + GS+
Sbjct: 66 HEG-EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 70 --------NCVRW-AKHGRYIA--SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW--- 115
W ++ G + G V + + G GS + ++ W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT-VKLWDIR 183
Query: 116 -KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
K A+ +T V+ + ++ + SG +DN I +W++ T +RGH+ V G++
Sbjct: 184 KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRL---GWSPCG 227
GS++ S + D TV +W ++ R + ++ + F + L WSP G
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN-FEKNLLRCSWSPDG 298
Score = 66 (28.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLD 358
IA GS DR + VW T S R L+ + H S+ ++++ PD + + S D
Sbjct: 301 IAAGSADRFVYVWDTTSRRVLYKLPGH--AGSINEVAFHPDEPIILSASSD 349
Score = 52 (23.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
I G D I VW + + + SV LS S +G L + ++D TV
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGH-ADSVTGLSLSSEGSYLLSNAMDNTV 260
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 171 (65.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ TL H V V WA G +A+ S D+ + + E GT E +P + +
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE-----GTVENQPSDPTRVPYKPQS 152
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG--ICTAVLRGHSSLVKGVAWD 176
M + W P +LAS S D+T+ ++ +C A L GH S V +A+D
Sbjct: 153 MK---------KVLWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD 203
Query: 177 PIGSFIASQSDDKTVIIWR 195
P G +AS SDD+TV IWR
Sbjct: 204 PSGQRLASCSDDRTVRIWR 222
Score = 155 (59.6 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 35/107 (32%), Positives = 55/107 (51%)
Query: 131 LNWSPDDSILASGSLDNTIHIWNMS--TGICTAVL-RGHSSLVKGVAWDPIGSFIASQSD 187
L W+P ++LAS D ++ IW + IC +VL GH V+ VAW P G+++AS S
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 188 DKTVIIWRTS--DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
D T IW+ + D+ +GH + + W+P G+ + T
Sbjct: 82 DATTCIWKKNKDDFECVTTLEGH------ENEVKSVAWAPSGNLLAT 122
Score = 150 (57.9 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 34/85 (40%), Positives = 44/85 (51%)
Query: 113 ENWKVAMTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTAVLRGHSSL 169
++W L GH V + WSP + LAS S D T IW N C L GH +
Sbjct: 48 DSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNKDDFECVTTLEGHENE 107
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIW 194
VK VAW P G+ +A+ S DK+V +W
Sbjct: 108 VKSVAWAPSGNLLATCSRDKSVWVW 132
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/161 (29%), Positives = 72/161 (44%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI-HEKKPGSGTTEFG 105
K + +E ATL H +V + + G+ +AS SDD+ + I + PG+
Sbjct: 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234
Query: 106 SGEPPDIENWKVAMTLRG-HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI------ 158
+G P +WK TL G H+ + D+ W LA+ D+ I ++ G
Sbjct: 235 NGSDP---SWKCICTLSGFHSRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPT 291
Query: 159 --CTAVL-RGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWR 195
TA L + HS V VAW+P +AS SDD + W+
Sbjct: 292 FSLTAHLPQAHSQDVNCVAWNPKEQGLLASCSDDGELAFWK 332
Score = 127 (49.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 41/151 (27%), Positives = 65/151 (43%)
Query: 65 HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGH 124
H +V V W+ G Y+AS S D I +K ++++ TL GH
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNK---------------DDFECVTTLEGH 104
Query: 125 TADVVDLNWSPDDSILASGSLDNTIHIW-----NMSTGICTAVLRGHSSLVKGVAWDPIG 179
+V + W+P ++LA+ S D ++ +W N + + S +K V W P
Sbjct: 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQS--MKKVLWHPSQ 162
Query: 180 SFIASQSDDKTVIIWRTS--DWSLAHRTDGH 208
+AS S D TV ++R DW +GH
Sbjct: 163 ELLASASYDDTVKLYREEEDDWVCCATLEGH 193
Score = 61 (26.5 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 307 NVIAIGSQDRTITVWT-TASPRPLFVAK-HFFTQSVVDLSWSPDGYSLFACSLDGTVANF 364
N++A S+D+++ VW T +P + + QS+ + W P L + S D TV +
Sbjct: 118 NLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVKLY 177
Query: 365 HFE 367
E
Sbjct: 178 REE 180
Score = 38 (18.4 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 592 SGSVAATTTTLSIRVFDKKEGED 614
+G++A +IRVF++ G D
Sbjct: 264 TGALATACGDDAIRVFEEDPGSD 286
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 309 IAIGSQDRTITVWTTASP 326
+A S DRT+ +W P
Sbjct: 209 LASCSDDRTVRIWRQYLP 226
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 163 (62.4 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 73/286 (25%), Positives = 117/286 (40%)
Query: 97 PGSGTTEFGSGE-----PPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIH 150
PG+G + G PP + + M L GH +V + P+ S LAS D I
Sbjct: 32 PGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 91
Query: 151 IWNMSTGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+WN+ G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 92 LWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH 150
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVK 268
+ S + R G P + T G + + TF + ++ V
Sbjct: 151 -TSFVNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAIQTFQ---NTYQVLAVT 200
Query: 269 FNHSMFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTIT 319
FN + + N +++ + +T + S G S + + + D T+
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 260
Query: 320 VWTTA--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLD 358
VW +P+ +F H F ++++ SWSPDG + A S D
Sbjct: 261 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 306
Score = 153 (58.9 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ +G D +
Sbjct: 54 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--------YG-----DCD 100
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 101 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 157
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLW 179
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ T+RGH V L+ S + S L S ++DNT+ +W++ C + +G+
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 280
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W P GS IA+ S D+ V +W T+ + ++ GH A S+ F
Sbjct: 281 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH-AGSINEVAF 335
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/138 (26%), Positives = 64/138 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +L T+R H SV + + G Y+ S + D + + + +P + +
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 280
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ N++ + LR +WSPD S +A+GS D +++W+ ++ L GH+ +
Sbjct: 281 VHNFEKNL-LR--------CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 331
Query: 172 GVAWDPIGSFIASQSDDK 189
VA+ P I S S DK
Sbjct: 332 EVAFHPDEPIIISASSDK 349
Score = 121 (47.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF-GSV 69
HEG +++ P A+ G D + +WN+ N+ + + L + GS+
Sbjct: 65 HEG-EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 70 --------NCVRW-AKHGRYIA--SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW--- 115
W ++ G + G V + + G GS + ++ W
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT-VKLWDIR 182
Query: 116 -KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
K A+ +T V+ + ++ + SG +DN I +W++ T +RGH+ V G++
Sbjct: 183 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 242
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRL---GWSPCG 227
GS++ S + D TV +W ++ R + ++ + F + L WSP G
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN-FEKNLLRCSWSPDG 297
Score = 65 (27.9 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLD 358
IA GS DR + VW T S R L+ + H S+ ++++ PD + + S D
Sbjct: 300 IAAGSADRFVYVWDTTSRRILYKLPGH--AGSINEVAFHPDEPIIISASSD 348
Score = 52 (23.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
I G D I VW + + + SV LS S +G L + ++D TV
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGH-ADSVTGLSLSSEGSYLLSNAMDNTV 259
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 73/286 (25%), Positives = 117/286 (40%)
Query: 97 PGSGTTEFGSGE-----PPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIH 150
PG+G + G PP + + M L GH +V + P+ S LAS D I
Sbjct: 33 PGAGQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 92
Query: 151 IWNMSTGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+WN+ G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 93 LWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH 151
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVK 268
+ S + R G P + T G + + TF + ++ V
Sbjct: 152 -TSFVNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAIQTFQ---NTYQVLAVT 201
Query: 269 FNHSMFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTIT 319
FN + + N +++ + +T + S G S + + + D T+
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 320 VWTTA--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLD 358
VW +P+ +F H F ++++ SWSPDG + A S D
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Score = 153 (58.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ +G D +
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--------YG-----DCD 101
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 102 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 158
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLW 180
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ T+RGH V L+ S + S L S ++DNT+ +W++ C + +G+
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W P GS IA+ S D+ V +W T+ + ++ GH A S+ F
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH-AGSINEVAF 336
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/138 (26%), Positives = 64/138 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +L T+R H SV + + G Y+ S + D + + + +P + +
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ N++ + LR +WSPD S +A+GS D +++W+ ++ L GH+ +
Sbjct: 282 VHNFEKNL-LR--------CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 172 GVAWDPIGSFIASQSDDK 189
VA+ P I S S DK
Sbjct: 333 EVAFHPDEPIILSASSDK 350
Score = 121 (47.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF-GSV 69
HEG +++ P A+ G D + +WN+ N+ + + L + GS+
Sbjct: 66 HEG-EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 70 --------NCVRW-AKHGRYIA--SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW--- 115
W ++ G + G V + + G GS + ++ W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT-VKLWDIR 183
Query: 116 -KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
K A+ +T V+ + ++ + SG +DN I +W++ T +RGH+ V G++
Sbjct: 184 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRL---GWSPCG 227
GS++ S + D TV +W ++ R + ++ + F + L WSP G
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN-FEKNLLRCSWSPDG 298
Score = 65 (27.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLD 358
IA GS DR + VW T S R L+ + H S+ ++++ PD + + S D
Sbjct: 301 IAAGSADRFVYVWDTTSRRILYKLPGH--AGSINEVAFHPDEPIILSASSD 349
Score = 52 (23.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
I G D I VW + + + SV LS S +G L + ++D TV
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGH-ADSVTGLSLSSEGSYLLSNAMDNTV 260
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 73/286 (25%), Positives = 117/286 (40%)
Query: 97 PGSGTTEFGSGE-----PPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIH 150
PG+G + G PP + + M L GH +V + P+ S LAS D I
Sbjct: 33 PGAGQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 92
Query: 151 IWNMSTGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+WN+ G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 93 LWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH 151
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVK 268
+ S + R G P + T G + + TF + ++ V
Sbjct: 152 -TSFVNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAIQTFQ---NTYQVLAVT 201
Query: 269 FNHSMFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTIT 319
FN + + N +++ + +T + S G S + + + D T+
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 320 VWTTA--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLD 358
VW +P+ +F H F ++++ SWSPDG + A S D
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Score = 153 (58.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ +G D +
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--------YG-----DCD 101
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 102 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 158
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLW 180
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ T+RGH V L+ S + S L S ++DNT+ +W++ C + +G+
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W P GS IA+ S D+ V +W T+ + ++ GH A S+ F
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH-AGSINEVAF 336
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/138 (26%), Positives = 64/138 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +L T+R H SV + + G Y+ S + D + + + +P + +
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ N++ + LR +WSPD S +A+GS D +++W+ ++ L GH+ +
Sbjct: 282 VHNFEKNL-LR--------CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 172 GVAWDPIGSFIASQSDDK 189
VA+ P I S S DK
Sbjct: 333 EVAFHPDEPIILSASSDK 350
Score = 121 (47.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF-GSV 69
HEG +++ P A+ G D + +WN+ N+ + + L + GS+
Sbjct: 66 HEG-EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 70 --------NCVRW-AKHGRYIA--SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW--- 115
W ++ G + G V + + G GS + ++ W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT-VKLWDIR 183
Query: 116 -KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
K A+ +T V+ + ++ + SG +DN I +W++ T +RGH+ V G++
Sbjct: 184 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRL---GWSPCG 227
GS++ S + D TV +W ++ R + ++ + F + L WSP G
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN-FEKNLLRCSWSPDG 298
Score = 65 (27.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLD 358
IA GS DR + VW T S R L+ + H S+ ++++ PD + + S D
Sbjct: 301 IAAGSADRFVYVWDTTSRRILYKLPGH--AGSINEVAFHPDEPIILSASSD 349
Score = 52 (23.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
I G D I VW + + + SV LS S +G L + ++D TV
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGH-ADSVTGLSLSSEGSYLLSNAMDNTV 260
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 73/286 (25%), Positives = 117/286 (40%)
Query: 97 PGSGTTEFGSGE-----PPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIH 150
PG+G + G PP + + M L GH +V + P+ S LAS D I
Sbjct: 33 PGAGQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 92
Query: 151 IWNMSTGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+WN+ G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 93 LWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH 151
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVK 268
+ S + R G P + T G + + TF + ++ V
Sbjct: 152 -TSFVNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAIQTFQ---NTYQVLAVT 201
Query: 269 FNHSMFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTIT 319
FN + + N +++ + +T + S G S + + + D T+
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 320 VWTTA--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLD 358
VW +P+ +F H F ++++ SWSPDG + A S D
Sbjct: 262 VWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Score = 153 (58.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ +G D +
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--------YG-----DCD 101
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 102 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 158
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLW 180
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ T+RGH V L+ S + S L S ++DNT+ +W++ C + +G+
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGN 281
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W P GS IA+ S D+ V +W T+ + ++ GH A S+ F
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH-AGSINEVAF 336
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 36/138 (26%), Positives = 64/138 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +L T+R H SV + + G Y+ S + D + + + +P + +
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGN 281
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ N++ + LR +WSPD S +A+GS D +++W+ ++ L GH+ +
Sbjct: 282 VHNFEKNL-LR--------CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 172 GVAWDPIGSFIASQSDDK 189
VA+ P I S S DK
Sbjct: 333 EVAFHPDEPIILSASSDK 350
Score = 121 (47.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF-GSV 69
HEG +++ P A+ G D + +WN+ N+ + + L + GS+
Sbjct: 66 HEG-EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 70 --------NCVRW-AKHGRYIA--SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW--- 115
W ++ G + G V + + G GS + ++ W
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT-VKLWDIR 183
Query: 116 -KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
K A+ +T V+ + ++ + SG +DN I +W++ T +RGH+ V G++
Sbjct: 184 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRL---GWSPCG 227
GS++ S + D TV +W ++ R + ++ + F + L WSP G
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHN-FEKNLLRCSWSPDG 298
Score = 65 (27.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLD 358
IA GS DR + VW T S R L+ + H S+ ++++ PD + + S D
Sbjct: 301 IAAGSADRFVYVWDTTSRRILYKLPGH--AGSINEVAFHPDEPIILSASSD 349
Score = 52 (23.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
I G D I VW + + + SV LS S +G L + ++D TV
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGH-ADSVTGLSLSSEGSYLLSNAMDNTV 260
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 138 (53.6 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 38/115 (33%), Positives = 55/115 (47%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
A GH V +N+SP +LASGS D T+ IW + + V R H++ V+ V +
Sbjct: 54 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS 113
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
G + SDDKTV +W T HR ++ S + R +SP G I +
Sbjct: 114 DGQSFVTASDDKTVKVWAT------HRQKFLFSLSQHINWVRCAKFSPDGRLIVS 162
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 46/215 (21%), Positives = 86/215 (40%)
Query: 19 IDVQPGALRFATGGGDHKVRIW--NMKSVGKNFENDESTQRLLATLRDHFGSVNC----- 71
++ P A+G D VRIW N+K F +T R + D V
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 72 VR-WAKHGRYIASGSDDQVILIH-EKKPGSGTTEFGSGEPPDIENW-----KVAMTLRGH 124
V+ WA H + + + K G + + ++ W + + H
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 125 TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIAS 184
V +++ P + +A+ +DNT+ +W++ T + HS+ V G+++ P G+++ +
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 185 QSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFR 219
S D T+ I + L + GH + F R
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR 281
Score = 119 (46.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
P E+ + +GH V +++S + LASGS+D+ + +W+M GH
Sbjct: 4 PCAEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 63
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIW 194
V V + P G +AS S DKTV IW
Sbjct: 64 VTCVNFSPSGHLLASGSRDKTVRIW 88
Score = 108 (43.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ ++ + H+A V L++ P + L + S D+T+ I ++ G L GH
Sbjct: 215 DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
VA+ G + AS D+ V++W+++
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 79 (32.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 3 AEKPSWVRH-EGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLL 59
AE PS RH +G + + +D + A+G D + +W+MK + +
Sbjct: 6 AEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYR--------- 56
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
H +V CV ++ G +ASGS D+ + I
Sbjct: 57 --FTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 65 (27.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 313 SQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKEL 371
S D+T+ VW T + LF +++H V +SPDG + + S D TV + +E
Sbjct: 122 SDDKTVKVWATHRQKFLFSLSQHI--NWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 179
Query: 372 GH 373
H
Sbjct: 180 VH 181
Score = 62 (26.9 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF 104
+ H +V CV ++ + + +ASGS D +++ KP S F
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRF 57
Score = 61 (26.5 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQS--VVDLSWSPDGYSLFACSLDGTV 361
IA D T+ VW + R L +H+ S V LS+ P G L S D T+
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNGLSFHPSGNYLITASSDSTL 253
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 176 (67.0 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 48/151 (31%), Positives = 68/151 (45%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWK 116
R + T + H VN ++W G +AS SDD + I K S + +I K
Sbjct: 340 RPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDL-QAHNKEIYTIK 398
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD 176
+ T G +L + DS S D+T+ +W++ GIC L H V VA+
Sbjct: 399 WSPTGPGTNNPNANLMLASLDS----ASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFS 454
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G ++AS S DK V IW T +L H G
Sbjct: 455 PDGRYLASGSFDKCVHIWNTQTGALVHSYRG 485
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 79/299 (26%), Positives = 127/299 (42%)
Query: 75 AKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAMTLRGHTADVVDLNW 133
AK+G A+G ++ I + G E PP+ A+ LRGH ++V W
Sbjct: 124 AKNGENTANGEENGAHTIANNHTDMMEVD-GDVEIPPN-----KAVVLRGHESEVFICAW 177
Query: 134 SPDDSILASGSLDNTIHIWNMS----TGICTAVLR-----GHSSL-----VKGVAWDPIG 179
+P +LASGS D+T IWN+S +G VLR G + V + W+ G
Sbjct: 178 NPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG 237
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKP 239
+ +A+ S D IW T D +LA H K G F L W+ G+FI + G K
Sbjct: 238 TLLATGSYDGFARIW-TKDGNLASTLGQH--K--GPIF--ALKWNKKGNFILSA-GVDKT 289
Query: 240 RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVG-------WT 292
GE F F H+AP + V + + + ++ + +G +
Sbjct: 290 TIIWDA-HTGEAKQQFPF--HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 293 NGTSKIGGKESQPY-NVIAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDG 349
T+++ + P N++A S D T+ +W+ + + H + + + WSP G
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAH--NKEIYTIKWSPTG 403
Score = 147 (56.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 49/183 (26%), Positives = 77/183 (42%)
Query: 51 NDESTQRLLAT-LRDHFGSVNCVRWAKHGRYIASGSDDQ--VILIHEKKPGSGTTEFGSG 107
N E T LLAT D F + W K G ++ + + + K G+ G
Sbjct: 234 NSEGT--LLATGSYDGFARI----WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD 287
Query: 108 EPP---DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR 164
+ D + H+A +D++W +++ AS S D IH+ + +
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS 224
GH++ V + WDP G+ +AS SDD T+ IW S H H K + + + WS
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAH-NKEIYT-----IKWS 400
Query: 225 PCG 227
P G
Sbjct: 401 PTG 403
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 77/330 (23%), Positives = 122/330 (36%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE--KKPGSGTTEFGSGEPPDIENWKVAM 119
LR H V W +ASGS D I + SG+T+ V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
DV L+W+ + ++LA+GS D IW G + L H + + W+ G
Sbjct: 225 N-----KDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTH 234
+FI S DKT IIW + H A +L + F C H
Sbjct: 279 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL-- 336
Query: 235 GFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPV 289
G +P H+ V +W T + L + + +K SM + + + +
Sbjct: 337 GQDRPIKTFQGHTNEV-NAIKWDPTGNLLASCSDDMTLKI-WSMKQDSCVHDLQAHNKEI 394
Query: 290 GWTNGTSKIGGKESQPYNVIAIGSQDR-----TITVWTTASPRPLF-VAKHFFTQSVVDL 343
+T S G + P + + S D T+ +W + + KH + V +
Sbjct: 395 -YTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKH--QEPVYSV 451
Query: 344 SWSPDGYSLFACSLDGTVANFHFEVKELGH 373
++SPDG L + S D V ++ + L H
Sbjct: 452 AFSPDGRYLASGSFDKCVHIWNTQTGALVH 481
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 69/254 (27%), Positives = 97/254 (38%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD---GHWAKSLGSTF- 217
VLRGH S V AW+P+ +AS S D T IW S+ S + T H + G
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 218 ----FRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFN 270
L W+ G + T GF + + G A+T LG H PI +K+N
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW-----TKDGNLAST---LGQHKGPIFALKWN 275
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPY-------------NVIAIGSQDRT 317
+ N S V + W T + K+ P+ N A S D
Sbjct: 276 K---KGNFILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSNNTFASCSTDMC 330
Query: 318 ITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLS- 376
I V RP+ + T V + W P G L +CS D T+ + + H L
Sbjct: 331 IHVCKLGQDRPIKTFQGH-TNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQA 389
Query: 377 -DAELDELKRSRYG 389
+ E+ +K S G
Sbjct: 390 HNKEIYTIKWSPTG 403
Score = 109 (43.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 43/177 (24%), Positives = 70/177 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE ++F P + A+G GD RIWN+ EN S L LR +
Sbjct: 168 HES-EVFICAWNPVSDLLASGSGDSTARIWNLS------ENSTSGSTQLV-LR------H 213
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
C+R + G+ + S D + + + T + ++ +A TL H +
Sbjct: 214 CIR--EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFA 271
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSD 187
L W+ + + S +D T IW+ TG HS+ V W +F + +D
Sbjct: 272 LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTD 328
Score = 58 (25.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T + V + T + ++ W+ G + A + DG+V
Sbjct: 460 LASGSFDKCVHIWNTQTGA--LVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 510
>UNIPROTKB|Q7RXM4 [details] [associations]
symbol:NCU00202 "Coronin" species:367110 "Neurospora crassa
OR74A" [GO:0005826 "actomyosin contractile ring" evidence=ISS]
[GO:0005885 "Arp2/3 protein complex" evidence=ISS] [GO:0030479
"actin cortical patch" evidence=ISS] [GO:0034316 "negative
regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 GO:GO:0005826 GO:GO:0051666
GO:GO:0034316 GO:GO:0005885 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B EMBL:AABX02000001
RefSeq:XP_956587.1 UniGene:Ncr.4234 ProteinModelPortal:Q7RXM4
STRING:Q7RXM4 EnsemblFungi:EFNCRT00000000015 GeneID:3872734
KEGG:ncr:NCU00202 Uniprot:Q7RXM4
Length = 683
Score = 165 (63.1 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 44/148 (29%), Positives = 71/148 (47%)
Query: 63 RDHFGSVNCVRWAK-HGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTL 121
R H +V W + R IAS SDD + + + P + T + EP D+ L
Sbjct: 155 RGHTAAVLDTDWNPFNDRLIASASDDGKVFVWQV-PENFTLYTDAEEPADVSPLS---KL 210
Query: 122 RGHTADVVDLNWSPD-DSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
GHT V + ++P ++ILAS S D T+ W++ TG ++ H +V+ ++W G+
Sbjct: 211 SGHTRKVGHVLFNPAAENILASSSGDLTVKFWDVETGQAPIAIK-HPDIVQSLSWSANGT 269
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+ + S DK + +W S H GH
Sbjct: 270 MLVTTSRDKKLRVWDVRQQSAVHEYQGH 297
Score = 61 (26.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 35/157 (22%), Positives = 56/157 (35%)
Query: 438 GVTTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQREYRRPDGRKRIIPEAVGVP 497
G+ K G V +D + S I PV + E P + +P + V
Sbjct: 464 GIPAKIDMESIYEGTAPREVPADYKPPTAVSSPIQPPVSKMESTPPPATR--VPTST-VA 520
Query: 498 VQQEGVTGGAQS--QLHDFPPVSSDHRKDNNGVVPADGVMREVSVRGTVGRSSDVKERSG 555
Q+ ++ A D P + PA VSVR ++ +S K S
Sbjct: 521 DQKASMSAIANKFQDNEDAEPSEGESSPFEEVSRPAARAAAPVSVRTSLPPASAGKTPSP 580
Query: 556 VTARATITESLVIEKVPASAAGDGNVGVEQSGNVKAS 592
T + + + + A+A + SGNV+AS
Sbjct: 581 TTYQTPVQKLASPVRTTAAAPAPASTASPSSGNVEAS 617
Score = 58 (25.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 377 DAELDELKRSRYGDVRGRLANLAETPAQLL--LEAASAKETTTKKVV-SDVQAIQAPVKS 433
DAE E + S + +V R A A P + L ASA +T + + VQ + +PV++
Sbjct: 538 DAEPSEGESSPFEEV-SRPAARAAAPVSVRTSLPPASAGKTPSPTTYQTPVQKLASPVRT 596
Query: 434 SVNIGVTTKTSEPQTDNGKKS 454
+ T+ P + N + S
Sbjct: 597 TAAAPAPASTASPSSGNVEAS 617
Score = 41 (19.5 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 545 GRSSDVKERSGVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAAT 598
G SS +E S ARA S+ PASA + Q+ K + V T
Sbjct: 544 GESSPFEEVSRPAARAAAPVSVRTSLPPASAGKTPSPTTYQTPVQKLASPVRTT 597
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 174 (66.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 113 ENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKG 172
E K T RGHTA++V L ++P +++A+GS+D T +W++ +G + L GH + +
Sbjct: 165 ETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIIS 224
Query: 173 VAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
+ ++ G + + S D T I+W H GH G + W C +
Sbjct: 225 LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGH----RGEISCVQFNWD-CS--LIA 277
Query: 233 THGFQKPRHSAPV--LERGEWAATFDFLGHNAPIIVVKFNHS 272
T K S V E G+ AT LGHN ++ V FN++
Sbjct: 278 TASLDK---SCKVWDAEGGQCLATL--LGHNDEVLDVCFNYT 314
Score = 137 (53.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 31/100 (31%), Positives = 51/100 (51%)
Query: 111 DIENWKVAMTLRGHTADV--VDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSS 168
D+ + + L GH ++ V NW D S++A+ SLD + +W+ G C A L GH+
Sbjct: 247 DVPSGRKVHVLSGHRGEISCVQFNW--DCSLIATASLDKSCKVWDAEGGQCLATLLGHND 304
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
V V ++ G IA+ S D T ++ T + + +GH
Sbjct: 305 EVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGH 344
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 28 FATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLR------DHF--GSVN--CVRW-AK 76
F TG D +IW+ S G+ E + ++ + D GS + C W A+
Sbjct: 107 FITGSYDRTCKIWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAE 165
Query: 77 HGR--YIASGSDDQVILIHEKKPGSGTTEFGSGEPP----DIENWKVAMTLRGHTADVVD 130
G+ Y G +++ + P S GS + D+E+ + TL GH A+++
Sbjct: 166 TGKCFYTFRGHTAEIVCL-AFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIIS 224
Query: 131 LNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKT 190
L ++ L +GS D+T +W++ +G VL GH + V ++ S IA+ S DK+
Sbjct: 225 LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKS 284
Query: 191 VIIW 194
+W
Sbjct: 285 CKVW 288
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 47/183 (25%), Positives = 79/183 (43%)
Query: 36 KVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEK 95
+V++ K K + DE L L+ H + V + K G +GS D+ I +
Sbjct: 62 QVKLLICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDT 121
Query: 96 KPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWS-PDDSILASGSLDNTIHIWNM 154
SGE ++ TL GH V + ++ P +A+GS D T +W+
Sbjct: 122 ---------ASGE--ELH------TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSA 164
Query: 155 STGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLG 214
TG C RGH++ + +A++P + +A+ S D T +W GH+A+ +
Sbjct: 165 ETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIIS 224
Query: 215 STF 217
F
Sbjct: 225 LCF 227
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 46/195 (23%), Positives = 87/195 (44%)
Query: 15 QIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF-------G 67
+I S+ R TG DH +W++ S G+ + ++ ++ ++
Sbjct: 221 EIISLCFNTTGDRLVTGSFDHTAILWDVPS-GRKVHVLSGHRGEISCVQFNWDCSLIATA 279
Query: 68 SVN--CVRW-AKHGRYIAS--GSDDQVILIHEKKPGS--GTTEF-GSGEPPDIENWKVAM 119
S++ C W A+ G+ +A+ G +D+V+ + G T G+ + ++
Sbjct: 280 SLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLC 339
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
L GH ++ + ++ S + + S+D T +W + TG C VL GHS + A++ G
Sbjct: 340 QLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEG 399
Query: 180 SFIASQSDDKTVIIW 194
I + S D T IW
Sbjct: 400 DTIITGSKDNTCRIW 414
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 138 (53.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 53/189 (28%), Positives = 90/189 (47%)
Query: 64 DHFGSVNCVRWA-KHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAMTL 121
+H G VN R+ ++ IA+ + +L+ + E SGE PD+ L
Sbjct: 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-PSGECQPDLR-------L 177
Query: 122 RGHTADVVDLNWSPD-DSILASGSLDNTIHIWNMSTG-----ICTA--VLRGHSSLVKGV 173
RGH + L+W+P+ + L S S D+TI +W+++ + A + GH+++V+ V
Sbjct: 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDV 237
Query: 174 AWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCGHF 229
AW + S S +DD+ ++IW R ++ S +H D H A+ L ++P F
Sbjct: 238 AWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE------VNCLSFNPYSEF 291
Query: 230 ITTTHGFQK 238
I T K
Sbjct: 292 ILATGSADK 300
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + ES H + V+W+ H I +SG+D
Sbjct: 294 ATGSADKTVALWDLRNLKLKLHSFES----------HKDEIFQVQWSPHNETILASSGTD 343
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G +TE PP++ GHTA + D +W+P++ I+ S S
Sbjct: 344 RRLHVWDLSKIGEEQSTEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWIICSVS 398
Query: 145 LDNTIHIWNMSTGI 158
DN + +W M+ +
Sbjct: 399 EDNIMQVWQMAENV 412
Score = 83 (34.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 277 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 333
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT H +++ ++G S DAE
Sbjct: 334 ETILASS--GTDRRLHVWDLSKIGEEQSTEDAE 364
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/79 (24%), Positives = 32/79 (40%)
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLF 330
HS F + +V+ +P T S + +++ IG + T P LF
Sbjct: 315 HS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-EDGPPELLF 372
Query: 331 V-AKHFFTQSVVDLSWSPD 348
+ H T + D SW+P+
Sbjct: 373 IHGGH--TAKISDFSWNPN 389
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 158 (60.7 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 47/142 (33%), Positives = 74/142 (52%)
Query: 64 DHFGSVNCVRWAKHGRYIASGSDD--QVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTL 121
DH V CVR+++ G++IA+G + QV + + + + S E D +N T
Sbjct: 198 DHSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKD-DN----TTA 252
Query: 122 RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF 181
G + + +SPD +LA+G+ D I IW++ST +LRGH + + + P G
Sbjct: 253 SGDLY-IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 182 IASQSDDKTVIIW--RTSDWSL 201
+ S S D++V IW RTS SL
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSL 333
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ ++ LRGH D+ L++ PD L SGS D ++ IW++ T C+ L V
Sbjct: 283 DLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-V 341
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD 206
VA P G IA+ S D+TV +W ++ L R D
Sbjct: 342 TTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/162 (27%), Positives = 65/162 (40%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D T + TL G V V + G+ IA+GS D+ + + + G SG
Sbjct: 325 DLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGN--- 380
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS-----TGICTAVLRGH 166
EN GH V + +S + +ASGSLD T+ +W++ C GH
Sbjct: 381 -ENGN------GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGH 433
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
V V P +I S S D+ VI W + + GH
Sbjct: 434 KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGH 475
Score = 64 (27.6 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFT---------QSVVDLSWSPDGYSLFACSLD 358
+IA GS DRT+ VW + + F+ + + SV +++S +G + + SLD
Sbjct: 352 LIAAGSLDRTVRVWDSTTG---FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Query: 359 GTVANFHFEVK 369
TV +H E K
Sbjct: 409 RTVKLWHLEGK 419
Score = 37 (18.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 423 DVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKV--STSG 469
D++ Q + S+ GVTT P +GK + D +V ST+G
Sbjct: 325 DLRTSQCSLTLSIEDGVTTVAVSP---DGKLIAAGSLDRTVRVWDSTTG 370
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 158 (60.7 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 47/142 (33%), Positives = 74/142 (52%)
Query: 64 DHFGSVNCVRWAKHGRYIASGSDD--QVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTL 121
DH V CVR+++ G++IA+G + QV + + + + S E D +N T
Sbjct: 198 DHSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKD-DN----TTA 252
Query: 122 RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF 181
G + + +SPD +LA+G+ D I IW++ST +LRGH + + + P G
Sbjct: 253 SGDLY-IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 182 IASQSDDKTVIIW--RTSDWSL 201
+ S S D++V IW RTS SL
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSL 333
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ ++ LRGH D+ L++ PD L SGS D ++ IW++ T C+ L V
Sbjct: 283 DLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-V 341
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD 206
VA P G IA+ S D+TV +W ++ L R D
Sbjct: 342 TTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/162 (27%), Positives = 65/162 (40%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D T + TL G V V + G+ IA+GS D+ + + + G SG
Sbjct: 325 DLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGN--- 380
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS-----TGICTAVLRGH 166
EN GH V + +S + +ASGSLD T+ +W++ C GH
Sbjct: 381 -ENGN------GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGH 433
Query: 167 SSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
V V P +I S S D+ VI W + + GH
Sbjct: 434 KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGH 475
Score = 64 (27.6 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFT---------QSVVDLSWSPDGYSLFACSLD 358
+IA GS DRT+ VW + + F+ + + SV +++S +G + + SLD
Sbjct: 352 LIAAGSLDRTVRVWDSTTG---FLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Query: 359 GTVANFHFEVK 369
TV +H E K
Sbjct: 409 RTVKLWHLEGK 419
Score = 37 (18.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 423 DVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGVASDGLNKV--STSG 469
D++ Q + S+ GVTT P +GK + D +V ST+G
Sbjct: 325 DLRTSQCSLTLSIEDGVTTVAVSP---DGKLIAAGSLDRTVRVWDSTTG 370
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 145 (56.1 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 56/191 (29%), Positives = 87/191 (45%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ YI + S D ++ + K P SGE PD+
Sbjct: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDP---SGECNPDLR------ 170
Query: 120 TLRGHTADVVDLNWSPD-DSILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + L S S D+T+ +W++S G A+ GHS++V+
Sbjct: 171 -LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVE 229
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 230 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAE------VNCLSFNPYS 283
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 284 EFILATGSADK 294
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + ES H + V W+ H I +SG+D
Sbjct: 288 ATGSADKTVALWDLRNLKLKLHSFES----------HKDEIFQVHWSPHNETILASSGTD 337
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 338 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 392
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 393 EDNIMQIWQMAENI 406
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH V +W++ S G E + + T H V V W H S +DDQ ++I
Sbjct: 197 DHTVCLWDI-SAGPK-EGKIVDAKAIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMI 252
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S TT K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 253 WDTR--SNTTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
Score = 75 (31.5 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 271 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVHWSPHN 327
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 328 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 358
Score = 39 (18.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 325 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 382
Query: 348 D 348
+
Sbjct: 383 N 383
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 136 (52.9 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
A GH V +N+SP +LASGS D T+ IW + + V R H++ V+ V +
Sbjct: 85 AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCS 144
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
G + SDDKT+ +W T HR ++ S + R +SP G I +
Sbjct: 145 DGQSFVTASDDKTIKVWST------HRQKFLFSLSQHINWVRCAKFSPDGRLIVS 193
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 44/215 (20%), Positives = 86/215 (40%)
Query: 19 IDVQPGALRFATGGGDHKVRIW--NMKSVGKNFENDESTQRLLATLRDHFGSVNC----- 71
++ P A+G D VRIW N+K F +T R + D V
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 72 VR-WAKHGRYIASGSDDQVILIH-EKKPGSGTTEFGSGEPPDIENW-KVAM----TLRGH 124
++ W+ H + + + K G + + ++ W K + + H
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 217
Query: 125 TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIAS 184
V +++ P + +A+ +DNT+ +W++ T + HS+ V +++ P G+++ +
Sbjct: 218 GGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 277
Query: 185 QSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFR 219
S D T+ I + L + GH + F R
Sbjct: 278 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR 312
Score = 114 (45.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 122 RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF 181
+GH V +++S + LASGS+D+ + +W+M GH V V + P G
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 106
Query: 182 IASQSDDKTVIIW 194
+AS S DKTV IW
Sbjct: 107 LASGSRDKTVRIW 119
Score = 108 (43.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ ++ + H+A V L++ P + L + S D+T+ I ++ G L GH
Sbjct: 246 DVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPA 305
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
VA+ G + AS D+ V++W+++
Sbjct: 306 TTVAFSRTGEYFASGGSDEQVMVWKSN 332
Score = 73 (30.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 4 EKPSWVRH-EGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA 60
E PS RH +G + + +D + A+G D + +W+MK + +
Sbjct: 38 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYR---------- 87
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
H +V CV ++ G +ASGS D+ + I
Sbjct: 88 -FTGHKDAVTCVNFSPSGHLLASGSRDKTVRI 118
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 313 SQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKEL 371
S D+TI VW+T + LF +++H V +SPDG + + S D TV + +E
Sbjct: 153 SDDKTIKVWSTHRQKFLFSLSQHI--NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 210
Query: 372 GH 373
H
Sbjct: 211 VH 212
Score = 63 (27.2 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF 104
+ D S +R + H +V CV ++ + + +ASGS D +++ KP S F
Sbjct: 37 QEDPSLER---HFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRF 88
Score = 58 (25.5 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQS--VVDLSWSPDGYSLFACSLDGTV 361
+A D T+ VW + R L +H+ S V LS+ P G L S D T+
Sbjct: 233 VAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNALSFHPSGNYLVTASSDSTL 284
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 166 (63.5 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 50/170 (29%), Positives = 75/170 (44%)
Query: 58 LLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV 117
L+ +L H +V V W+ GR++A S D I EK ++E V
Sbjct: 61 LVQSLEGHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKD------------ELEFTHV 108
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSLVKGVA 174
+ +L GHT +V + W ++LA+ S D +I IW M C ++ GH +K V
Sbjct: 109 S-SLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVL 167
Query: 175 WDPIGSFIASQSDDKTVIIWRT--SDWSLAHRTDGHWAKSLGSTFFRRLG 222
W P +AS S D T+ W+ DW + GH S+ F + G
Sbjct: 168 WHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGH-ESSIWDLAFNKDG 216
Score = 151 (58.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 46/155 (29%), Positives = 74/155 (47%)
Query: 50 ENDESTQRLLATLRDH--FGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSG 107
+ND+ +L+ +++ + V + W +G +A+ ++D+ I I K +G
Sbjct: 6 KNDKYNLKLIDSMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDT--------NG 57
Query: 108 EPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGIC--TAV--L 163
+ W + +L GH V + WSP LA S D + IW S T V L
Sbjct: 58 K------WGLVQSLEGHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSL 111
Query: 164 RGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSD 198
GH+ VK VAWD G+ +A+ S DK++ IW+ D
Sbjct: 112 EGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMED 146
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/146 (28%), Positives = 65/146 (44%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
DE +++L H V V W G +A+ S D+ I I + + + D
Sbjct: 101 DELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDN-----------D 149
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI--CTAVLRGHSSL 169
E + GH D+ + W P++ +LAS S D+TI W G C L GH S
Sbjct: 150 FECLSINS---GHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESS 206
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWR 195
+ +A++ G + S +DK V+ W+
Sbjct: 207 IWDLAFNKDGDKLVSCGEDKLVLFWK 232
Score = 47 (21.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 339 SVVDLSWSPDGYSLFACSLDGTVANFHFEVKE 370
S+ DL+++ DG L +C D V + F+ KE
Sbjct: 206 SIWDLAFNKDGDKLVSCGEDKLVLFWKFD-KE 236
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 183 (69.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 67/277 (24%), Positives = 115/277 (41%)
Query: 95 KKPGSGTTEFGSGEPPD-IE-NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIW 152
+ GS T +PP+ ++ +K + LRGH+ + + SP+ +AS S D T IW
Sbjct: 148 RSTGSSPTPAAESKPPERVQVRYKRRLELRGHSQPIAQVRISPNGRWIASASADGTARIW 207
Query: 153 NMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGHW 209
+ TG L GH + V +AW P +A+ SDDK + +W AH DG
Sbjct: 208 DAETGAHIDTLVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDD 267
Query: 210 AKSLGSTF--FRRLGWSPCGHFITTTHGFQKPRHSA--PVLERGEWAATFDFLGHNAPII 265
G T R G S G G P P+L + F +
Sbjct: 268 DAERGRTHGGTRISGASGIG-----VGGGGGPARGTRRPLLGHHNYVYCLAFSPKGNILA 322
Query: 266 VVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIG-SQDRTITVWTTA 324
++ ++F + + + +++ P + + G + + + S D I +W TA
Sbjct: 323 SGSYDEAVFLWDVRAGRLMRSLPAH----SDPVSGIDFCRDGTLVVSCSTDGLIRIWDTA 378
Query: 325 SPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ + L H +V ++ +SP+G + A +LD +
Sbjct: 379 TGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCI 415
Score = 39 (18.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 532 DGVMREVSVRGTVGRSSDVKERSGVTARATITESLVIEKVPASAAG-DGNVGVEQSGNVK 590
DGV V V G S+ K+ + R T+ +K G DG G+E G +
Sbjct: 516 DGVCFWVDVVGDTMVSAG-KDARILVYRNTLNSRR--QKTAVETNGVDGTKGMETGGGAE 572
Query: 591 ASG 593
+G
Sbjct: 573 ENG 575
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 160 (61.4 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 43/128 (33%), Positives = 62/128 (48%)
Query: 82 ASGSDDQVILIHEKKPGSGTTEFGSGEPPDIEN-WKVAMTLRGHTADVVDLNWSPDDSIL 140
A+G D LI ++P S T + +PP+ WK+ + GH V L P++
Sbjct: 106 AAGDDKPTSLI--QRP-SATRQ----QPPEWHAPWKLMRVISGHLGWVRSLAVEPNNEWF 158
Query: 141 ASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWS 200
ASG+ D TI IWN++TG L GH S V+G+A P ++ S +DK V W
Sbjct: 159 ASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNK 218
Query: 201 LAHRTDGH 208
+ GH
Sbjct: 219 VIRHYHGH 226
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 54/213 (25%), Positives = 85/213 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKS--VGKNFENDESTQRLLATLRDH--- 65
H G + S+ V+P FA+G GD ++IWN+ + + ST R LA H
Sbjct: 142 HLGW-VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYL 200
Query: 66 F--GSVNCVR-WAKHGR-----YIASGSDDQVILIHEKKP--GSGTTEFGSGEPPDIENW 115
F G V+ W Y S + +H + +G + G D+
Sbjct: 201 FSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRD-GVARVWDMRTR 259
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
L GHT V D+ D + +GSLD T+ +W+++ G VL H ++ +A
Sbjct: 260 SNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLAT 319
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
P AS S ++ W+ +GH
Sbjct: 320 HPREFTFASASTG-SIKQWKCPGGEFMQNFEGH 351
Score = 59 (25.8 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 290 GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDG 349
G T + + +E+ P VI GS D T+ +W A+ + + V H + + L+ P
Sbjct: 267 GHTGTVADVQCQEADP-QVIT-GSLDATVRLWDLAAGKTMGVLTHH-KKGIRSLATHPRE 323
Query: 350 YSLFACSLDGTV 361
++ FA + G++
Sbjct: 324 FT-FASASTGSI 334
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 150 (57.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + GHT DV+ L+ SPD SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRT-SDWSLAHRTDGHWAKSLGSTFFRRLG 222
VA+ P G+ A+ SDD T ++ +D LA + + + S F + G
Sbjct: 230 NAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSG 282
Score = 64 (27.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 42 MKSVGKNFENDESTQ-RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
+ +V N E Q R TLR H + + WA R + S S D +++
Sbjct: 30 LATVASNLEPIGRIQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIV 81
>UNIPROTKB|Q9XSC3 [details] [associations]
symbol:WDR44 "WD repeat-containing protein 44" species:9913
"Bos taurus" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 EMBL:AF117897
IPI:IPI00717067 RefSeq:NP_777199.1 UniGene:Bt.216 HSSP:P38262
ProteinModelPortal:Q9XSC3 STRING:Q9XSC3 PRIDE:Q9XSC3 GeneID:286825
KEGG:bta:286825 CTD:54521 HOGENOM:HOG000267152 HOVERGEN:HBG080376
InParanoid:Q9XSC3 OrthoDB:EOG4K6G3H NextBio:20806479 Uniprot:Q9XSC3
Length = 912
Score = 177 (67.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 78/314 (24%), Positives = 133/314 (42%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
A+ G D+ VRIW +K+ F D+F ++ +++ GR S S +
Sbjct: 526 ASAGQDNVVRIWALKNA---F--------------DYFNNMR-MKYNTEGRVSPSPSQES 567
Query: 89 VILIHEKKPGSGTTEF-GSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASG 143
++ K + T G+ E PD +N + +GHTAD++DL+WS + +L+S
Sbjct: 568 ---LNSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS- 623
Query: 144 SLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA 202
S+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 624 SMDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVA 682
Query: 203 --HRTDGHWAKSLGSTFFRRLGWSPCGH------FITTTH-GFQKPRHSAPVLER---GE 250
+ DG + F + ++ G F T H + H R G
Sbjct: 683 LWNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKVGR 742
Query: 251 WAATFDFL-GHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVI 309
+ L G N I+V N S R + G+ N +S+I S +N +
Sbjct: 743 KITGIEPLPGENK--ILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFNYL 800
Query: 310 AIGSQDRTITVWTT 323
GS+D+ + +W+T
Sbjct: 801 VSGSEDKYVYIWST 814
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 33 GDHKVRIWNMK--SVGKNFEN--DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
G+H +W MK G+ + ++ R+ A L++ F N +R + S S Q
Sbjct: 507 GEHMGAVWTMKFSHCGRLLASAGQDNVVRIWA-LKNAFDYFNNMRMKYNTEGRVSPSPSQ 565
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASGS 144
L K G+ E PD +N + +GHTAD++DL+WS + +L+S S
Sbjct: 566 ESLNSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS-S 624
Query: 145 LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA- 202
+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 625 MDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVAL 683
Query: 203 -HRTDG 207
+ DG
Sbjct: 684 WNEVDG 689
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 60/204 (29%), Positives = 90/204 (44%)
Query: 64 DHFGSVNCVRWAKH--GRYIASGSDDQVILIHEKKPGSG--TTEFGSGEPPDIEN--WKV 117
DH SVN + WA H G +A GS D I + + G T+ P + + W
Sbjct: 101 DHKSSVNSIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 160
Query: 118 AMTLRGH--TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGHSSLVK 171
A T G ++ ++D + LASG DNT+ +W ++ G C L+ H+ V+
Sbjct: 161 A-TAPGALVSSGLLDPVYK-----LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVR 214
Query: 172 GVAWDP-IG---SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW P +G S IAS S D VIIW + +G K + +R + WS G
Sbjct: 215 DVAWAPNLGLPKSTIASGSQDGKVIIWTVG--KEGEQWEGKVLKDFMTPVWR-VSWSLTG 271
Query: 228 HFITTTHGFQKPRHSAPVLERGEW 251
+ + + G ++ GEW
Sbjct: 272 NLLAVSDGNNNVTVWKEAVD-GEW 294
Score = 98 (39.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 64/237 (27%), Positives = 94/237 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE + + + + R AT D ++I + + N S Q LATL H G V
Sbjct: 10 HEDI-VHDVQMDYYGKRIATASSDCTIKITGVSN------NGGSQQ--LATLTGHRGPVW 60
Query: 71 CVRWA--KHGRYIASGS-DDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTAD 127
V WA K+G +AS S D QVIL E G W H +
Sbjct: 61 EVAWAHPKYGSILASCSYDGQVILWKE-----GNQN----------QWTQDHVFTDHKSS 105
Query: 128 VVDLNWSPDDS--ILASGSLDNTIHIWNMST--GICTAVL-RGHSSLVKGVAWDPI---G 179
V + W+P D LA GS D I ++ G T+ + + H V V+W P G
Sbjct: 106 VNSIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPG 165
Query: 180 SFI-----------ASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSP 225
+ + AS D TV +W+ ++ S + D A + + R + W+P
Sbjct: 166 ALVSSGLLDPVYKLASGGCDNTVKVWKLANGSW--KMDCFPALQKHTDWVRDVAWAP 220
Score = 68 (29.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 305 PYNVIAIGSQDRTITVWTTASPRPLF---VAKHFFTQSVVDLSWSPDGYSLFACSLDG 359
P + IA GSQD + +WT + V K F T V +SWS G +L A S DG
Sbjct: 225 PKSTIASGSQDGKVIIWTVGKEGEQWEGKVLKDFMTP-VWRVSWSLTG-NLLAVS-DG 279
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 179 (68.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 90 ILIHEKKPGSGTTEFGS-GEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
I H+ +GT + G D+ + M L GH ++ +N+SP+ +A+GS DNT
Sbjct: 370 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 429
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPI-GSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
+W++ C + H +LV GV ++PI G+F+ + + D T IW WS G
Sbjct: 430 CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAG 489
Query: 208 HWAKSLG 214
H K +G
Sbjct: 490 HEGKVMG 496
Score = 135 (52.6 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + + GH+ V D+ + D S+ +G LD +W++ TG C L GH +
Sbjct: 350 DLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
G+ + P G IA+ S D T +W
Sbjct: 410 YGINFSPNGYHIATGSGDNTCKVW 433
Score = 104 (41.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 120 TLRGHTADVVDLNWSPDDSI--------LASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
TLRGH +V + + P ++ LAS + D ++ +W++ + A + GH+ V
Sbjct: 267 TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 326
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRT-SDWSLAHRTDGH 208
V W P G F+ + D++ +W + + H+ +GH
Sbjct: 327 RVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ-EGH 363
Score = 67 (28.6 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 298 IGGKESQPY--NVIAIGSQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSPDGYSLFA 354
+ G + +P N + G+ D T +WT PL +A H V+ L S DG +
Sbjct: 451 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH--EGKVMGLDISSDGQLIAT 508
Query: 355 CSLDGT 360
CS D T
Sbjct: 509 CSYDRT 514
Score = 40 (19.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 26 LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
+ A+ D V++W++ S DE +A + H V V W GR++ +
Sbjct: 293 VNLASCAADGSVKLWSLDS-------DEP----VADIEGHTVRVARVTWHPSGRFLGTTC 341
Query: 86 DDQ 88
D+
Sbjct: 342 YDR 344
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 162 (62.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 45/146 (30%), Positives = 65/146 (44%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
++A TL G +A V+ +SPD +L SGS+D T+ ++ G+ L H V A+
Sbjct: 230 QLAHTLTGQSAPVLSCAYSPDGQMLVSGSVDKTVTVYQADEGVLLYTLHQHDRYVTACAF 289
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHG 235
P IA+ S DK+V IWR + S A G + F G CGH
Sbjct: 290 SPTAPLIATGSMDKSVNIWRMEEGSSAQ---GELFADEKAAFSNTEGRKACGHSRLMVSE 346
Query: 236 FQKPRHSAPVLERGEWAATFDFLGHN 261
+ + A + E G A T F +N
Sbjct: 347 WSEEEVLAWLREEGLEAVTDAFKSNN 372
Score = 102 (41.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 39/119 (32%), Positives = 55/119 (46%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR--GHSSLVKGVAWDPI 178
L GH V +S LAS S D T +W+M TG AVL G S V+ A+ P
Sbjct: 50 LSGHGYGVHCCCFSACGQYLASCSTDATTMVWSMDTGEIEAVLEHPGRSP-VRVCAFSPD 108
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGH-FIT-TTHG 235
S + S D ++ +W + +L R G + T ++PCG FIT +T+G
Sbjct: 109 SSHLVSGGSDGSIALWDFTSRTL--RRTG----VVNDTSIVACSFTPCGQMFITGSTYG 161
Score = 57 (25.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 58 LLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKK 96
L+ TL+ H VNCV ++ G +A+ S D+ I ++ +
Sbjct: 4 LICTLQSHRDDVNCVAFS--GDLLATCSADKSICVYSSR 40
Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 22/89 (24%), Positives = 41/89 (46%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
++ GS D+T+TV+ A L H + V ++SP + S+D +V N +
Sbjct: 253 MLVSGSVDKTVTVYQ-ADEGVLLYTLHQHDRYVTACAFSPTAPLIATGSMDKSV-NI-WR 309
Query: 368 VKELGHRLSDAELDELKRSRYGDVRGRLA 396
++E + DE ++ + + GR A
Sbjct: 310 MEEGSSAQGELFADE--KAAFSNTEGRKA 336
Score = 51 (23.0 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 309 IAIGSQDRTITVWTTA---SPRPLFVAKHFFT-QS--VVDLSWSPDGYSLFACSLDGTV 361
+A QD + +W + S H T QS V+ ++SPDG L + S+D TV
Sbjct: 205 LASCGQDSLLKIWIVSLLPSAGIKMQLAHTLTGQSAPVLSCAYSPDGQMLVSGSVDKTV 263
Score = 41 (19.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 23 PGALRFATGGGDHKVRIWNMKS 44
P + +GG D + +W+ S
Sbjct: 107 PDSSHLVSGGSDGSIALWDFTS 128
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 50/163 (30%), Positives = 71/163 (43%)
Query: 108 EPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHS 167
E P N+ + +TL GH+A + + +SP+ LAS + D I IW G C L GHS
Sbjct: 22 EEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHS 81
Query: 168 SLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
+ VAW S + S SDDKT+ +W GH S F ++P
Sbjct: 82 LEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGH------SDFVFCCDFNPPS 135
Query: 228 HFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFN 270
+ I + F + V + G+ T H+ PI V FN
Sbjct: 136 NLIVSG-SFDESVKIWEV-KTGKCLKTLS--AHSDPISAVNFN 174
Score = 140 (54.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + K TL+GH+ V +++P +++ SGS D ++ IW + TG C L HS +
Sbjct: 109 DMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPI 168
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
V ++ GS I S S D IW
Sbjct: 169 SAVNFNCNGSLIVSGSYDGLCRIW 192
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 41/150 (27%), Positives = 73/150 (48%)
Query: 52 DESTQRLLATLRDHFGS-VNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPP 110
D ++ + L TL D V+ V+++ +G+YI + + D + + + G + +G
Sbjct: 193 DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY-TGH-- 249
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
+N K + + V W + SGS DN ++IWN+ T L+GH+ +V
Sbjct: 250 --KNEKYCLFA---SFSVTGRKW------VVSGSEDNMVYIWNLQTKEIVQRLQGHTDVV 298
Query: 171 KGVAWDPIGSFIASQS--DDKTVIIWRTSD 198
A P + IAS + +DKT+ +W +SD
Sbjct: 299 ISAACHPTKNIIASAALENDKTIKVW-SSD 327
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 41/158 (25%), Positives = 64/158 (40%)
Query: 55 TQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGT-TEFGSGEPPDIE 113
T + L TL H ++ V + +G I SGS D + I + G T G PP
Sbjct: 154 TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP--- 210
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSS--LVK 171
V + +SP+ + + +LDNT+ +W+ S G C GH +
Sbjct: 211 --------------VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCL 256
Query: 172 GVAWDPIG-SFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
++ G ++ S S+D V IW + R GH
Sbjct: 257 FASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGH 294
Score = 52 (23.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPG 98
TL H ++ V W+ + S SDD+ + + + + G
Sbjct: 76 TLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSG 113
>TAIR|locus:2168606 [details] [associations]
symbol:AT5G53500 "AT5G53500" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB015476
HOGENOM:HOG000239143 EMBL:AY091118 EMBL:AY142508 IPI:IPI00519714
RefSeq:NP_200162.1 UniGene:At.29552 ProteinModelPortal:Q9FJD3
SMR:Q9FJD3 EnsemblPlants:AT5G53500.1 GeneID:835432
KEGG:ath:AT5G53500 TAIR:At5g53500 InParanoid:Q9FJD3 OMA:EIDPSCM
PhylomeDB:Q9FJD3 ProtClustDB:CLSN2916315 ArrayExpress:Q9FJD3
Genevestigator:Q9FJD3 Uniprot:Q9FJD3
Length = 654
Score = 157 (60.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 90 ILIHEKKPGSGTTEFGSGE-------PPDIENW--KVAMTLRGHTADVVDLNWSPDDSIL 140
+L++E+KP T F PP + K RGHT +V+D++WS D+ +L
Sbjct: 284 VLVNEEKPKKTTESFRKTSDSACVVFPPKVFRIMEKPLYEFRGHTGEVLDISWSKDNYLL 343
Query: 141 ASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTSDW 199
S S+D T+ +W + + C V H+S V V ++P+ ++ S S D V IW S
Sbjct: 344 -SASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISGC 401
Query: 200 SLAHRTD 206
S+ D
Sbjct: 402 SVVDWAD 408
Score = 66 (28.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 16/71 (22%), Positives = 38/71 (53%)
Query: 24 GALRFATGGGD--HKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI 81
G +R ++G GD +V++ + K K +Q + A H G++ ++++ G+++
Sbjct: 181 GRMRASSGYGDVISRVKVKHCKKQAKELSALYQSQDIKA----HDGAILAMKFSNDGKFL 236
Query: 82 ASGSDDQVILI 92
AS +D ++ +
Sbjct: 237 ASSGEDGIVRV 247
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 179 (68.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 90 ILIHEKKPGSGTTEFGS-GEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
I H+ +GT + G D+ + M L GH ++ +N+SP+ +A+GS DNT
Sbjct: 386 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 445
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPI-GSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
+W++ C + H +LV GV ++PI G+F+ + + D T IW WS G
Sbjct: 446 CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAG 505
Query: 208 HWAKSLG 214
H K +G
Sbjct: 506 HEGKVMG 512
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + + GH+ V D+ + D S+ +G LD +W++ TG C L GH +
Sbjct: 366 DLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 425
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
G+ + P G IA+ S D T +W
Sbjct: 426 YGINFSPNGYHIATGSGDNTCKVW 449
Score = 103 (41.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 120 TLRGHTADVVDLNWSPDDSI--------LASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
TLRGH +V + + P ++ LAS + D ++ +W++ + A + GH+ V
Sbjct: 283 TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 342
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRT-SDWSLAHRTDGH 208
V W P G F+ + D++ +W + + H+ +GH
Sbjct: 343 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ-EGH 379
Score = 67 (28.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 298 IGGKESQPY--NVIAIGSQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSPDGYSLFA 354
+ G + +P N + G+ D T +WT PL +A H V+ L S DG +
Sbjct: 467 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH--EGKVMGLDISSDGQLIAT 524
Query: 355 CSLDGT 360
CS D T
Sbjct: 525 CSYDRT 530
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 26 LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
+ A+ D V++W++ S DE +A + H V V W GR++ +
Sbjct: 309 VNLASCAADGSVKLWSLDS-------DEP----VADIEGHTVRVARVMWHPSGRFLGTTC 357
Query: 86 DDQ 88
D+
Sbjct: 358 YDR 360
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 179 (68.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 90 ILIHEKKPGSGTTEFGS-GEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
I H+ +GT + G D+ + M L GH ++ +N+SP+ +A+GS DNT
Sbjct: 388 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 447
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPI-GSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
+W++ C + H +LV GV ++PI G+F+ + + D T IW WS G
Sbjct: 448 CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAG 507
Query: 208 HWAKSLG 214
H K +G
Sbjct: 508 HEGKVMG 514
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + + GH+ V D+ + D S+ +G LD +W++ TG C L GH +
Sbjct: 368 DLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 427
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
G+ + P G IA+ S D T +W
Sbjct: 428 YGINFSPNGYHIATGSGDNTCKVW 451
Score = 103 (41.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 120 TLRGHTADVVDLNWSPDDSI--------LASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
TLRGH +V + + P ++ LAS + D ++ +W++ + A + GH+ V
Sbjct: 285 TLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVA 344
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRT-SDWSLAHRTDGH 208
V W P G F+ + D++ +W + + H+ +GH
Sbjct: 345 RVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ-EGH 381
Score = 67 (28.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 298 IGGKESQPY--NVIAIGSQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSPDGYSLFA 354
+ G + +P N + G+ D T +WT PL +A H V+ L S DG +
Sbjct: 469 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH--EGKVMGLDISSDGQLIAT 526
Query: 355 CSLDGT 360
CS D T
Sbjct: 527 CSYDRT 532
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 26 LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
+ A+ D V++W++ S DE +A + H V V W GR++ +
Sbjct: 311 VNLASCAADGSVKLWSLDS-------DEP----VADIEGHTVRVARVMWHPSGRFLGTTC 359
Query: 86 DDQ 88
D+
Sbjct: 360 YDR 362
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 154 (59.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 46/142 (32%), Positives = 72/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ +G D E
Sbjct: 44 SLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNV--------YG-----DCE 90
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 91 NYA---TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC 147
Query: 174 AWDPIGSFIA-SQSDDKTVIIW 194
G +A + SDD TV +W
Sbjct: 148 FPARRGPQLACTGSDDGTVKLW 169
Score = 141 (54.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 37/106 (34%), Positives = 51/106 (48%)
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICT--AVLRGHSSLVKGVAWD 176
M L GH +V + P+ + LAS D I +WN+ G C A L+GHS V + ++
Sbjct: 50 MLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHYN 108
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
GS + S S DKTV +W + R GH + S F R G
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGH-TSFVNSCFPARRG 153
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ +++GH V L+ S D S L S S+DN++ +W++ C + +G+
Sbjct: 211 DLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGN 270
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W GS IA+ S D+ V IW T+ + ++ GH A S+ F
Sbjct: 271 VHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGH-AGSVNEVAF 325
Score = 118 (46.6 bits), Expect = 0.00069, P = 0.00069
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +L+ +++ H SV + + G Y+ S S D + + + +P + +
Sbjct: 211 DLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGN 270
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ N++ + LR +WS D S +A+GS D ++IW+ +T L GH+ V
Sbjct: 271 VHNFEKNL-LR--------CSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVN 321
Query: 172 GVAWDPIGSFIASQSDDKTVII 193
VA+ P + S S DK + I
Sbjct: 322 EVAFHPEEPIVLSGSSDKRLYI 343
Score = 59 (25.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/90 (24%), Positives = 40/90 (44%)
Query: 293 NGTSKIGGKESQPYNVIAIGSQDRTITVWTTA--SPRP----LFVAK-HFFTQSVVDLSW 345
+G S G S + + S D ++ VW +P+ +F H F ++++ SW
Sbjct: 224 HGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSW 283
Query: 346 SPDGYSLFACSLDGTVANFHFEVKELGHRL 375
S DG + A S D V + + + ++L
Sbjct: 284 SADGSKIAAGSADRFVYIWDTTTRRIVYKL 313
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 178 (67.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 90 ILIHEKKPGSGTTEFGS-GEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
I H+ +GT + G D+ + M L GH ++ +N+SP+ +A+GS DNT
Sbjct: 370 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNT 429
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPI-GSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
+W++ C + H +LV GV ++PI G F+ + + D T IW WS G
Sbjct: 430 CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAG 489
Query: 208 HWAKSLG 214
H K +G
Sbjct: 490 HEGKVMG 496
Score = 135 (52.6 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + + GH+ V D+ + D S+ +G LD +W++ TG C L GH +
Sbjct: 350 DLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
G+ + P G IA+ S D T +W
Sbjct: 410 YGINFSPNGYHIATGSGDNTCKVW 433
Score = 62 (26.9 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 298 IGGKESQPYN--VIAIGSQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSPDGYSLFA 354
+ G + +P + + G+ D T +WT PL +A H V+ L S DG +
Sbjct: 451 VTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGH--EGKVMGLDISSDGQLIAT 508
Query: 355 CSLDGT 360
CS D T
Sbjct: 509 CSYDRT 514
Score = 40 (19.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 26 LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
+ A+ D V++W++ S DE +A + H V V W GR++ +
Sbjct: 293 VNLASCAADGSVKLWSLDS-------DEP----VADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 86 DDQ 88
D+
Sbjct: 342 YDR 344
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 166 (63.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 76/262 (29%), Positives = 110/262 (41%)
Query: 11 HEGMQIFSID-VQP--GALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFG 67
HEG ++ +D P G + A+ D KV IW EN +Q +A H
Sbjct: 52 HEG-PVWRVDWAHPKFGTI-LASCSYDGKVLIWKE-------ENGRWSQ--IAVHAVHSA 100
Query: 68 SVNCVRWAKH--GRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHT 125
SVN V+WA H G + S D + + E K +GTT P I+ + +
Sbjct: 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE-NGTTS-----PIIIDAHAIGVNSASWA 154
Query: 126 ADVVDL----NWSPDDSILASGSLDNTIHIWNMS----TGICTAVLRGHSSLVKGVAWDP 177
++ N + + +G DN + IW + T + + L GHS V+ VAW P
Sbjct: 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214
Query: 178 ---IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL--GSTF---FRRLGWSPCGHF 229
+ S++AS S D+T IIW T D G W K+L F R WS G+
Sbjct: 215 TVLLRSYLASVSQDRTCIIW-TQD-----NEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 268
Query: 230 ITTTHGFQKPRHSAPVLERGEW 251
+ + G K LE G+W
Sbjct: 269 LALSGGDNKVTLWKENLE-GKW 289
Score = 41 (19.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 307 NVIAIGSQDRTITVW 321
NV+A+ D +T+W
Sbjct: 267 NVLALSGGDNKVTLW 281
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 175 (66.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 54/205 (26%), Positives = 88/205 (42%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
I ++DV L F + D +R+W M G+ + L G+V+C R
Sbjct: 389 ILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVV----CVAQGLGHAHG-VGAVSCSRLK 443
Query: 76 KHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP 135
+ ++ + S D I + P S T++ + E MT RGH D+ + SP
Sbjct: 444 ES--FVVTSSQDCTIKVWNI-PESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSP 500
Query: 136 DDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWR 195
+D ++A+GS D +W+ V GH + V + P+ +A+ S D T+ +W
Sbjct: 501 NDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWG 560
Query: 196 TSDWSLAHRTDGHWAKSLGSTFFRR 220
D+S +GH A L F R
Sbjct: 561 LQDFSCLKTFEGHDASVLKIIFVSR 585
Score = 114 (45.2 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 121 LRGHTADVVDLNWSPDDSILA--SGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
L+G + V + + PD S L S S+D I IW++++ C AVL GH S V +A+
Sbjct: 148 LKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTAD 207
Query: 179 GSFIASQSDDKTVIIW 194
G+ + S DK ++W
Sbjct: 208 GNTLISSGRDKICMVW 223
Score = 109 (43.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 25/92 (27%), Positives = 39/92 (42%)
Query: 123 GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
GH + + +SP D ILA+ S D T+ +W + C GH + V + + G+ +
Sbjct: 530 GHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQL 589
Query: 183 ASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLG 214
S D + +W DGH K G
Sbjct: 590 LSGGSDGLLKLWTIKTNECVKTLDGHEDKIWG 621
Score = 61 (26.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 26 LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
L+ + D+K+RIW++ S + +A L HF +V + + G + S
Sbjct: 167 LQLFSSSMDYKIRIWDLNS-----------SKCVAVLDGHFSAVTSLAFTADGNTLISSG 215
Query: 86 DDQVILIHEKK 96
D++ ++ K
Sbjct: 216 RDKICMVWNLK 226
Score = 51 (23.0 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFV-AKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+IA GSQDR +W+ L V H + + + +SP L S DGT+
Sbjct: 504 LIATGSQDRLAKLWSCPDCSLLGVFTGH--KRGIWCVQFSPVDQILATSSADGTL 556
Score = 48 (22.0 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 29 ATGGGDHKVRIWNM 42
ATGG D ++IW+M
Sbjct: 126 ATGGCDSTIKIWDM 139
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 140 (54.3 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 38/115 (33%), Positives = 56/115 (48%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
A GH V +N+SP +LASGS D T+ IW + + V R H++ V+ V +
Sbjct: 54 AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCS 113
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
G + + SDDKTV +W T HR ++ S + R +SP G I +
Sbjct: 114 DGQSLVTASDDKTVKVWST------HRQKFLFSLSQHINWVRCARFSPDGRLIVS 162
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 67/290 (23%), Positives = 108/290 (37%)
Query: 19 IDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHG 78
++ P A+G D VRIW G EST R H +V V + G
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKG------EST-----VFRAHTATVRSVHFCSDG 115
Query: 79 RYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS 138
+ + + SDD+ + + K +L H V +SPD
Sbjct: 116 QSLVTASDDKTVKVWST-----------------HRQKFLFSLSQHINWVRCARFSPDGR 158
Query: 139 ILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW--RT 196
++ S S D T+ +W+ ++ C H V V + P G+ IA+ S D TV +W RT
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRT 218
Query: 197 SDW------------SLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAP 244
+L+ G++ + S ++ G + T HG Q P +
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 245 VLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNG 294
GE+ A+ G + ++V K N + AP+ T+G
Sbjct: 279 FSRTGEYFASG---GSDEQVMVWKSNFDVVDYREVIKVHRPPAPLA-TSG 324
Score = 119 (46.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 122 RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF 181
+GH + +++S + LASGS+D+ + +W+M GH V V + P G
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 182 IASQSDDKTVIIW 194
+AS S DKTV IW
Sbjct: 76 LASGSRDKTVRIW 88
Score = 65 (27.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFE 367
+ S D+T+ VW+T + LF +++H V +SPDG + + S D TV +
Sbjct: 118 LVTASDDKTVKVWSTHRQKFLFSLSQHI--NWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 368 VKELGH 373
+E H
Sbjct: 176 SRECVH 181
Score = 64 (27.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQS--VVDLSWSPDGYSLFACSLDGTV 361
IA S D T+ VW + R L +H+ S V LS+ P G L S D T+
Sbjct: 202 IAAASMDNTVKVWDVRTHRLL---QHYQLHSAAVNALSFHPSGNYLLTASSDSTL 253
Score = 52 (23.4 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF 104
+ H ++ V ++ + + +ASGS D +++ KP S F
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRF 57
>MGI|MGI:2449311 [details] [associations]
symbol:Gemin5 "gem (nuclear organelle) associated protein 5"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016604 "nuclear body" evidence=ISO] [GO:0017069
"snRNA binding" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2449311 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0016604 GO:GO:0017069 KO:K13133
CTD:25929 HOVERGEN:HBG051721 OrthoDB:EOG43BMN0 EMBL:AK049216
EMBL:AK143536 EMBL:AL672182 IPI:IPI00226397 RefSeq:NP_001160141.1
RefSeq:NP_001160142.1 RefSeq:NP_001160143.1 RefSeq:NP_766146.2
UniGene:Mm.275349 ProteinModelPortal:Q8BX17 IntAct:Q8BX17
STRING:Q8BX17 PhosphoSite:Q8BX17 PaxDb:Q8BX17 PRIDE:Q8BX17
Ensembl:ENSMUST00000035604 GeneID:216766 KEGG:mmu:216766
GeneTree:ENSGT00620000088064 InParanoid:Q3UPH2 NextBio:375298
Bgee:Q8BX17 CleanEx:MM_GEMIN5 Genevestigator:Q8BX17
GermOnline:ENSMUSG00000037275 Uniprot:Q8BX17
Length = 1502
Score = 171 (65.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 53/151 (35%), Positives = 69/151 (45%)
Query: 57 RLLATLRDHFGSVNCVRWA-KHGR------YIASGSDDQVILIHEKKPGSGTTEFGSGEP 109
RLL T++ H VN + W +HG +ASGS++ VI +H K E P
Sbjct: 569 RLLCTIQQHHKLVNAIVWHHEHGSRPELSCLLASGSNNAVIYVHNLK---AVLESNPESP 625
Query: 110 PDI-ENWKVAMTLRGHTADVVDLNWSPD-DSILASGSLDNTIHIWNMSTGICTAVLRGHS 167
I E ++ TL GHTA + L WSP D L S D T +W+ RGH
Sbjct: 626 ITITEPYR---TLSGHTAKITSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHR 682
Query: 168 SLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
+ VAW P+ I S +DD V W TS
Sbjct: 683 GRLLCVAWSPVDPECIYSGADDFCVYRWLTS 713
Score = 59 (25.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 17 FS-IDVQPGALRFATGGGDHKVRIWNMKSVGKNFE 50
FS +DV G+L A G GD +R+WN S+ N++
Sbjct: 387 FSPVDV--GSL--AIGVGDGMIRVWNTLSIKNNYD 417
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 141 (54.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 57/191 (29%), Positives = 91/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + + D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDP---SGECTPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++ST G I A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 76 (31.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 73/286 (25%), Positives = 117/286 (40%)
Query: 97 PGSGTTEFGSGE-----PPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIH 150
PG+G + G PP + + M L GH +V + P+ S LAS D I
Sbjct: 32 PGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 91
Query: 151 IWNMSTGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+WN+ G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 92 LWNVY-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH 150
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVK 268
+ S + R G P + T G + + TF + ++ V
Sbjct: 151 -TSFVNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAIQTFQ---NTYQVLAVT 200
Query: 269 FNHSMFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTIT 319
FN + + N +++ + +T + S G S + + + D T+
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 260
Query: 320 VWTTA--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLD 358
VW +P+ +F H F ++++ SWSPDG + A S D
Sbjct: 261 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 306
Score = 153 (58.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ +G +AS D++IL+ +G D +
Sbjct: 54 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV--------YG-----DCD 100
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 101 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 157
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLW 179
Score = 147 (56.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ T+RGH V L+ S + S L S ++DNT+ +W++ C + +G+
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 280
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W P GS IA+ S D+ V +W T+ + ++ GH A S+ F
Sbjct: 281 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH-AGSINEVAF 335
Score = 121 (47.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF-GSV 69
HEG +++ P A+ G D + +WN+ N+ + + L + GS+
Sbjct: 65 HEG-EVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 70 --------NCVRW-AKHGRYIA--SGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW--- 115
W ++ G + G V + + G GS + ++ W
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT-VKLWDIR 182
Query: 116 -KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVA 174
K A+ +T V+ + ++ + SG +DN I +W++ T +RGH+ V G++
Sbjct: 183 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 242
Query: 175 WDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRL---GWSPCG 227
GS++ S + D TV +W ++ R + ++ + F + L WSP G
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN-FEKNLLRCSWSPDG 297
Score = 61 (26.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPD 348
IA GS DR + VW T S R L+ + H S+ ++++ PD
Sbjct: 300 IAAGSADRFVYVWDTTSRRILYKLPGH--AGSINEVAFHPD 338
Score = 52 (23.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
I G D I VW + + + SV LS S +G L + ++D TV
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGH-ADSVTGLSLSSEGSYLLSNAMDNTV 259
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 70/282 (24%), Positives = 115/282 (40%)
Query: 96 KPGSGTTEFGSGEPPDIENWKVA-MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM 154
+P +G SG PP + + M L GH +V + P + LAS D I +WN+
Sbjct: 65 QPSTGAL-LQSG-PPRCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNV 122
Query: 155 STGICT--AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKS 212
G C A L+GHS V + ++ GS + S S DKTV +W + R GH
Sbjct: 123 Y-GDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGH-TSF 180
Query: 213 LGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS 272
+ S + R G P + T G + + TF + ++ V FN +
Sbjct: 181 VNSCYPARRG--P--QLVCT--GSDDGTVKLWDIRKKAAVQTFQ---NTYQVLAVTFNDT 231
Query: 273 MFR------RNSASSQEVKAAPVGWT---NGTSKIGGKESQPYNVIAIGSQDRTITVWTT 323
+ N +++ + +T + S G S + + + D T+ +W
Sbjct: 232 SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDV 291
Query: 324 A--SPRP----LFVAK-HFFTQSVVDLSWSPDGYSLFACSLD 358
+P+ +F H F ++++ SWSPDG + S D
Sbjct: 292 RPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSAD 333
Score = 151 (58.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 44/142 (30%), Positives = 70/142 (49%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q + L H G V C ++ G +AS D++IL+ +G D +
Sbjct: 81 SLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNV--------YG-----DCD 127
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ TL+GH+ V++L+++ D S+L S S D T+ +W+ TG L+GH+S V
Sbjct: 128 NYA---TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC 184
Query: 174 AWDPIG-SFIASQSDDKTVIIW 194
G + + SDD TV +W
Sbjct: 185 YPARRGPQLVCTGSDDGTVKLW 206
Score = 146 (56.5 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 52/209 (24%), Positives = 90/209 (43%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HEG +++ P A+ G D + +WN+ N+ ATL+ H G+V
Sbjct: 92 HEG-EVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNY----------ATLKGHSGAVM 140
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGS------GTTEF-GSGEP----PD-------- 111
+ + G + S S D+ + + + + G G T F S P P
Sbjct: 141 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 200
Query: 112 --IENW----KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRG 165
++ W K A+ +T V+ + ++ + SG +DN I +W++ T +RG
Sbjct: 201 GTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 260
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
H+ V G++ GS++ S + D TV IW
Sbjct: 261 HADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
Score = 145 (56.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI----CTAVLRGH 166
D+ K+ T+RGH V L+ S + S L S ++DNT+ IW++ C + +G+
Sbjct: 248 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGN 307
Query: 167 -SSLVKGV---AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
+ K + +W P GS IA S D+ V +W T+ + ++ GH A S+ F
Sbjct: 308 VHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGH-AGSVNELAF 362
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPD 111
D +L T+R H SV + + G Y+ S + D + I + +P + +
Sbjct: 248 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGN 307
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ N++ + LR +WSPD S +A GS D +++W+ ++ L GH+ V
Sbjct: 308 VHNFEKNL-LR--------CSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVN 358
Query: 172 GVAWDPIGSFIASQSDDK 189
+A+ P I S S DK
Sbjct: 359 ELAFHPEEPIILSASSDK 376
Score = 62 (26.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLD 358
IA GS DR + VW T S R L+ + H SV +L++ P+ + + S D
Sbjct: 327 IAGGSADRFVYVWDTTSRRILYKLPGH--AGSVNELAFHPEEPIILSASSD 375
Score = 52 (23.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
I G D I VW + + + SV LS S +G L + ++D TV
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGH-ADSVTGLSLSSEGSYLLSNAMDNTV 286
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 172 (65.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 53 ESTQRLLATLRDHFG-SVNCVRWAKHGRYIASGSDDQVILIHEKKP--GSGTTEFGSGEP 109
+ST RLLAT D +V V +H + + + I K+ +G+ + GS
Sbjct: 30 KSTGRLLATGGDDCRVNVWSVAQLRHDLLTGHTTPIESLQISAKEELIVAGS-QSGSIRV 88
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
D+E K+ TL GH A++ L++ P S +ASGSLD I +W++ C + H+
Sbjct: 89 WDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQA 148
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHW 209
V+ + + P G ++AS +DD TV +W + + GH+
Sbjct: 149 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 188
Score = 150 (57.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 42/171 (24%), Positives = 74/171 (43%)
Query: 107 GEPPDIENWKVAMT----LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAV 162
G+ + W VA L GHT + L S + ++ +GS +I +W++
Sbjct: 40 GDDCRVNVWSVAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRT 99
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG 222
L GH + + + + P GSF+AS S D + +W + H + R L
Sbjct: 100 LLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSH------TQAVRCLR 153
Query: 223 WSPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSM 273
+SP G ++ + H+ + + F+F GH P+ VV+F+ S+
Sbjct: 154 FSPDGKWLASA----ADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSI 200
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 161 (61.7 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 44/154 (28%), Positives = 71/154 (46%)
Query: 65 HFGSVNCVRWAKHG-RYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRG 123
H G + V +AK + SGS D+ + + G +E S EP N K +
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL---DGISE-DSEEPI---NLKTRSVVAA 497
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIA 183
H D+ + + +DS++ +GS D T IW + + L+GH + V + + +
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 184 SQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTF 217
+ S DKTV IW SD S +GH + L ++F
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASF 591
Score = 129 (50.5 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E K + +GH V+ + +LA+ D + +W++ G CT RGH +V
Sbjct: 88 DLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVV 147
Query: 171 KGVAWDPIGS--FIASQSDDKTVIIW 194
+ + P + + S SDD TV +W
Sbjct: 148 SSILFHPDSNKNILISGSDDATVRVW 173
Score = 128 (50.1 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D + V T+ G + + L SPDD +L S I +W++ T C +GH V
Sbjct: 46 DSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPV 105
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
G+A G +A+ D+ V++W H GH
Sbjct: 106 MGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH 143
Score = 111 (44.1 bits), Expect = 6.5e-06, Sum P(4) = 6.5e-06
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS--ILASGSLDNTIHIWNMSTGI----CTAVLR 164
D++ RGH V + + PD + IL SGS D T+ +W+++ C A++
Sbjct: 130 DVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIME 189
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWS 200
H S V +A G + S DK V +W D+S
Sbjct: 190 KHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYS 225
Score = 111 (44.1 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
PD+ + +TL+GH + + +S D + + S D T+ IW +S G C GH+S
Sbjct: 529 PDLVH---VVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSS 585
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH----WAKSLG 214
V ++ G+ S D + +W + D H WA ++G
Sbjct: 586 VLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVG 634
Score = 110 (43.8 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS---ILASGSLDNTIHIWNMSTGICTAVLRGHS 167
D+ + L GH V+ L+ S ++ +GS D T+ +WN ++ C V GH+
Sbjct: 387 DVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHN 446
Query: 168 SLVKGVAWDPIG-SFIASQSDDKTVIIW 194
+ VA+ SF S S D+T+ +W
Sbjct: 447 GDILAVAFAKKSFSFFVSGSGDRTLKVW 474
Score = 94 (38.1 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
T GHT+ V+ ++ D + S D + +WN++T C A H V +A
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKT 637
Query: 180 SFIASQSDDKTVIIWRTS 197
IA+ D + +W S
Sbjct: 638 EMIATGGGDAVINLWHDS 655
Score = 89 (36.4 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 27/116 (23%), Positives = 55/116 (47%)
Query: 111 DIENWKVAMTLR--GHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGICTAVLRGHS 167
++E ++ ++ R G+ ++ D+ + D+ LA + + +++++T C+ VL GH
Sbjct: 342 NVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHK 401
Query: 168 SLVKGV--AWDPIGS-FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRR 220
+V + G+ I + S DKTV +W + S GH L F ++
Sbjct: 402 EVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKK 457
Score = 76 (31.8 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 14/65 (21%), Positives = 34/65 (52%)
Query: 28 FATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDD 87
F +G GD +++W++ + ++ E + + + + H +N V A++ + +GS+D
Sbjct: 462 FVSGSGDRTLKVWSLDGISEDSE-EPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSED 520
Query: 88 QVILI 92
+ I
Sbjct: 521 RTASI 525
Score = 74 (31.1 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 11 HEGMQIFSIDVQPGALR--FATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGS 68
H+G+ + SI P + + +G D VR+W++ + KN E ++ LA + HF +
Sbjct: 143 HKGV-VSSILFHPDSNKNILISGSDDATVRVWDLNA--KNTE-----KKCLAIMEKHFSA 194
Query: 69 VNCVRWAKHGRYIASGSDDQVI 90
V + ++ G + S D+V+
Sbjct: 195 VTSIALSEDGLTLFSAGRDKVV 216
Score = 70 (29.7 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 307 NVIAIGSQDRTITVW-----TTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
N++ GS D T+ VW T + KHF +V ++ S DG +LF+ D V
Sbjct: 159 NILISGSDDATVRVWDLNAKNTEKKCLAIMEKHF--SAVTSIALSEDGLTLFSAGRDKVV 216
Score = 59 (25.8 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 7 SWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNM 42
SW HEG + G L AT G D KV +W++
Sbjct: 97 SWKGHEGPVMGMACHASGGL-LATAGADRKVLVWDV 131
Score = 59 (25.8 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEV 368
+ S D+T+ +W + L + T SV+ S+ DG +C DG + ++
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGH-TSSVLRASFITDGTQFVSCGADGLLKLWNVNT 614
Query: 369 KE 370
E
Sbjct: 615 SE 616
Score = 54 (24.1 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 18/77 (23%), Positives = 28/77 (36%)
Query: 250 EWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVI 309
E A FLG + V N R ++ G + S NV+
Sbjct: 359 EEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVL 418
Query: 310 AI-GSQDRTITVWTTAS 325
+ GS+D+T+ +W S
Sbjct: 419 IVTGSKDKTVRLWNATS 435
Score = 47 (21.6 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 440 TTKTSEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQREYRRPDGR---KRIIPEAVG 495
T +T P+ + K+ +A+ + + + + +P ++R+ ++ G+ KR+I EA G
Sbjct: 815 TVETEYPKDEKKKEKDVIAA--MEQDTDELKQETPSRKRKSQKSKGKSNKKRLIAEAQG 871
Score = 46 (21.3 bits), Expect = 5.3e-06, Sum P(4) = 5.3e-06
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 307 NVIAIGSQDRTITVW 321
+++ GS+DRT ++W
Sbjct: 512 SLVCTGSEDRTASIW 526
Score = 43 (20.2 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 264 IIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWT 322
+IV R +A+S+ G NG + ++ GS DRT+ VW+
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGH-NGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 166 (63.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 53/174 (30%), Positives = 80/174 (45%)
Query: 58 LLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV 117
L+ H ++ + W+ Y S SDD + I + + P E KV
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDAR-----------SP--YECLKV 123
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
LRGHT V +N++P +++ SGS D TI IW + TG C +++ HS + V ++
Sbjct: 124 ---LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 178 IGSFIASQSDDKTVIIWRTSDWS-LAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
GS I S S D + IW + + L D KS +F + +SP G FI
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDD---KSPAVSFAK---FSPNGKFI 228
Score = 153 (58.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 59/243 (24%), Positives = 99/243 (40%)
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI-CTAVLRGHSSLVKG 172
N+ + GH++ + DL WS D S S D T+ IW+ + C VLRGH++ V
Sbjct: 74 NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Query: 173 VAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
V ++P + I S S D+T+ IW H + + S F R G ++
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAH-SMPISSVHFNRDG----SLIVSA 188
Query: 233 TH-GFQK---PRHSA---PVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVK 285
+H G K + +++ A +F N I+V S + ++ ++ +
Sbjct: 189 SHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL 248
Query: 286 AAPVGWTNGTSKIGGKESQPYN-VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLS 344
G TN I S I GS+D + +W + R + T +V+ +S
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQA-RNILQRLEGHTDAVISVS 307
Query: 345 WSP 347
P
Sbjct: 308 CHP 310
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 106 SGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRG 165
SG P + ++ TL GHTA + + +S D ++LAS S+D T+ +W+ + G
Sbjct: 24 SGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEG 83
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
HSS + +AW + S SDD T+ IW
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIW 112
>UNIPROTKB|F1NIQ6 [details] [associations]
symbol:CORO1C "Coronin" species:9031 "Gallus gallus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 EMBL:AADN02034974
EMBL:AADN02034968 EMBL:AADN02034969 EMBL:AADN02034970
EMBL:AADN02034971 EMBL:AADN02034972 EMBL:AADN02034973
IPI:IPI00587350 Ensembl:ENSGALT00000007837 ArrayExpress:F1NIQ6
Uniprot:F1NIQ6
Length = 201
Score = 147 (56.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/136 (33%), Positives = 65/136 (47%)
Query: 61 TLRDHFGSVNCVRWAKHG-RYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
T+ H G V + W H + IASGS+D +++ + P +G T EP +
Sbjct: 75 TVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQI-PENGLT-LSLTEP--------VV 124
Query: 120 TLRGHTADVVDLNWSPDD-SILASGSLDNTIHIWNMSTGICTAVLRG-HSSLVKGVAWDP 177
L GH+ V + W P ++L S DN I IWN+ TG L H ++ V+W+
Sbjct: 125 VLEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHVDVIYNVSWNR 184
Query: 178 IGSFIASQSDDKTVII 193
GS I + S DK V I
Sbjct: 185 NGSLICTASKDKKVRI 200
>RGD|1586275 [details] [associations]
symbol:Gemin5 "gem (nuclear organelle) associated protein 5"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017069 "snRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1586275 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016604
GO:GO:0017069 OrthoDB:EOG43BMN0 GeneTree:ENSGT00620000088064
IPI:IPI00957464 ProteinModelPortal:D3ZGD0 PRIDE:D3ZGD0
Ensembl:ENSRNOT00000044299 UCSC:RGD:1586275 Uniprot:D3ZGD0
Length = 1501
Score = 169 (64.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 53/151 (35%), Positives = 69/151 (45%)
Query: 57 RLLATLRDHFGSVNCVRWA-KHGR------YIASGSDDQVILIHEKKPGSGTTEFGSGEP 109
+LL T++ H VN + W +HG +ASGS++ VI +H K E P
Sbjct: 569 KLLCTIQQHHKLVNAIVWHHEHGSRPELSCLLASGSNNAVIYVHNLK---AVLESNPESP 625
Query: 110 PDI-ENWKVAMTLRGHTADVVDLNWSPD-DSILASGSLDNTIHIWNMSTGICTAVLRGHS 167
I E ++ TL GHTA V L WSP D L S D T +W+ RGH
Sbjct: 626 ITITEPYR---TLSGHTAKVTSLAWSPHHDGRLVSACYDGTAQVWDALREEPLFNFRGHR 682
Query: 168 SLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
+ VAW P+ I S +DD V W TS
Sbjct: 683 GRLLCVAWSPVDPECIYSGADDFCVYRWLTS 713
Score = 59 (25.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 17 FS-IDVQPGALRFATGGGDHKVRIWNMKSVGKNFE 50
FS +DV G+L A G GD +R+WN S+ N++
Sbjct: 387 FSPVDV--GSL--AIGVGDGMIRVWNTLSIKNNYD 417
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 134 (52.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 32/93 (34%), Positives = 47/93 (50%)
Query: 102 TEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTA 161
T+ E P +E RGH + +++S + LASGS+D+ + IW+M +
Sbjct: 2 TQHSVEEDPSLERH-----FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAY 56
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
L GH V V + P G +AS S DKTV +W
Sbjct: 57 CLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLW 89
Score = 128 (50.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 43/174 (24%), Positives = 72/174 (41%)
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+ K +L H V +SPD ++AS S D T+ +W+ ++ C H
Sbjct: 133 VHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFAN 192
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFIT 231
V + P G+ IA+ DKTV +W L H A ++ S L + P G+++
Sbjct: 193 HVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTA-AVNS-----LSFHPSGNYLI 246
Query: 232 TTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSM-FRRNSASSQEV 284
T + +L+ E + GH P V F+ + F + S ++V
Sbjct: 247 TASNDS----TLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQV 296
Score = 126 (49.4 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
A L GH V+ + +SP ++ASGS D T+ +W S + V + H++ V+ V +
Sbjct: 55 AYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSS 114
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
G + + SDDKT+ +W HR ++ S + R +SP G I +
Sbjct: 115 DGQSLVTASDDKTIKVWTV------HRQKFLFSLSQHINWVRCARFSPDGRLIAS 163
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 43/147 (29%), Positives = 66/147 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRY-IASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW 115
RL+A+ D +V W K R I S + H + SGT +G ++ W
Sbjct: 159 RLIASASDD-KTVKL--WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Query: 116 KVAMT-----LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
V M + HTA V L++ P + L + S D+T+ I ++ G L GH
Sbjct: 216 DVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPA 275
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
VA+ G F AS D+ V++W+T+
Sbjct: 276 TCVAFSRTGDFFASGGSDEQVMVWKTN 302
Score = 120 (47.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 42/141 (29%), Positives = 67/141 (47%)
Query: 67 GSVN-CVR-WAKHGR---YIASGSDDQVILIHEKKPGSGTTEFGSGEPPD---IENWKVA 118
GS++ C++ W+ + Y G D V+ + + P GS + + + K
Sbjct: 38 GSMDSCLKIWSMKPQMRAYCLVGHKDAVMCV-QFSPSGHLVASGSRDKTVCLWVPSVKGE 96
Query: 119 MTL-RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
T+ + HTA V +++S D L + S D TI +W + L H + V+ + P
Sbjct: 97 STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP 156
Query: 178 IGSFIASQSDDKTVIIW-RTS 197
G IAS SDDKTV +W +TS
Sbjct: 157 DGRLIASASDDKTVKLWDKTS 177
Score = 83 (34.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 2 IAEKPSWVRH-EGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRL 58
+ E PS RH G + I S+D + A+G D ++IW+MK Q
Sbjct: 6 VEEDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKP-----------QMR 54
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
L H +V CV+++ G +ASGS D+ + +
Sbjct: 55 AYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCL 88
Score = 64 (27.6 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHF--FTQSVVDLSWSPDGYSLFACSLDGTV 361
IA D+T+ VW R L +H+ T +V LS+ P G L S D T+
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLL---QHYQVHTAAVNSLSFHPSGNYLITASNDSTL 254
Score = 63 (27.2 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+ S D+TI VWT + LF +++H V +SPDG + + S D TV
Sbjct: 119 LVTASDDKTIKVWTVHRQKFLFSLSQHI--NWVRCARFSPDGRLIASASDDKTV 170
Score = 57 (25.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ + P A+G D V +W + SV EST + H +V V ++
Sbjct: 65 VMCVQFSPSGHLVASGSRDKTVCLW-VPSV-----KGEST-----VFKAHTATVRSVHFS 113
Query: 76 KHGRYIASGSDDQVI---LIHEKK 96
G+ + + SDD+ I +H +K
Sbjct: 114 SDGQSLVTASDDKTIKVWTVHRQK 137
Score = 53 (23.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKP 97
E D S +R R H ++ V ++ + + +ASGS D + I KP
Sbjct: 7 EEDPSLER---HFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKP 51
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 66/249 (26%), Positives = 101/249 (40%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST-GICTAVLRGHSS 168
D+ K+ + L HT V DL ++PD S IL S S D T+ +W++ G VLRGH +
Sbjct: 156 DVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQN 215
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF---------- 218
V G A+ P S + S K V +W +S+ + +GH + F
Sbjct: 216 WVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPDGALLATAS 275
Query: 219 ---RRLGWSPCGHFITTTHGFQKPRHSAPVLERG---EWAATFDFLGHNAPIIVVKFNHS 272
R W P I G P + P+ G W + F H+ I +
Sbjct: 276 YDTRVYVWDPYIGVILREFGHLFPPPT-PIFAGGANDRWVRSVSF-SHDGLHIASLADDK 333
Query: 273 MFRRNSASSQ-EVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV 331
M R + V+ AP+ NG + +V+A G QD ++ W T PR +
Sbjct: 334 MVRFWRIDEEYPVQVAPLN--NGLCCTFSTDG---SVLAAG-QDGSVHFWAT--PRQVSS 385
Query: 332 AKHFFTQSV 340
+H ++
Sbjct: 386 LQHLCRMAI 394
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 165 (63.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 64/228 (28%), Positives = 100/228 (43%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + TL GHT +N++P +++ SGS D T+ IW+++TG C VL HS V
Sbjct: 99 DVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPV 158
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGS------TFFRRLGWS 224
V ++ GS I S S D IW + GH K+L +F R +S
Sbjct: 159 TAVDFNRDGSLIVSSSYDGLCRIWDSGT--------GHCVKTLIDDENPPVSFVR---FS 207
Query: 225 PCGHFI---TTTHGFQKPR-HSAPVLE------RGEWAATFDFLGHNAPIIVVKFNHSMF 274
P G FI T + + SA L+ ++ + F N IV +
Sbjct: 208 PNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 275 RRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWT 322
+S+++ G T + ++ N+IA GS D+T+ +WT
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTE--NLIASGSLDKTVRIWT 313
Score = 144 (55.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 81/316 (25%), Positives = 124/316 (39%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT 120
TL H +V+ V+++ GR +AS S D+ I + T EP
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYT----INTINDPIAEP--------VQE 66
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
GH + D+ +S D + S S D T+ +W++ TG L GH++ V ++P +
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 181 FIASQSDDKTVIIWR-TSDWSL----AH---------RTDGHWAKSLGSTFFRRLGWSPC 226
I S S D+TV IW T+ L AH DG S R+ S
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 227 GHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKA 286
GH + T + P PV +F N I+V + R + SS +
Sbjct: 187 GHCVKTLIDDENP----PV--------SFVRFSPNGKFILVGTLDNTLRLWNISSAKFLK 234
Query: 287 APVGWTNGTSKIGGKESQPYNV-IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSW 345
G N I S I GS+D + +W S + L T++V++++
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKK-LLQKLEGHTETVMNVAC 293
Query: 346 SPDGYSLFACSLDGTV 361
P + + SLD TV
Sbjct: 294 HPTENLIASGSLDKTV 309
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 70/275 (25%), Positives = 108/275 (39%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMST---GICTAV--LRGHSSLVKG 172
+ TL H V + +S D +LAS S D TI + ++T I V GH + +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 173 VAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHF--- 229
VA+ FI S SDDKT+ +W SL GH + F + G F
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136
Query: 230 -----ITTTHGFQK-PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRR-NSASSQ 282
+TT + P HS PV DF + +IV + R +S +
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPV-------TAVDF-NRDGSLIVSSSYDGLCRIWDSGTGH 188
Query: 283 EVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV-AKHFFTQSVV 341
VK S + + S I +G+ D T+ +W +S + L H Q +
Sbjct: 189 CVKTLIDDENPPVSFV--RFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Query: 342 DLSWS-PDGYSLFACSLDGTVANFHFEVKELGHRL 375
++S +G + + S D V + K+L +L
Sbjct: 247 SSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKL 281
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 139 (54.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 112 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 162
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 163 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 221
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 222 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 275
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 276 EFILATGSADK 286
Score = 119 (46.9 bits), Expect = 0.00073, P = 0.00073
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 280 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 329
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 330 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 384
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 385 EDNIMQIWQMAENI 398
Score = 75 (31.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 263 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 319
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 320 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 350
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 317 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 374
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 375 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 412
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 139 (54.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 112 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 162
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 163 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 221
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 222 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 275
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 276 EFILATGSADK 286
Score = 119 (46.9 bits), Expect = 0.00073, P = 0.00073
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 280 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 329
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 330 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 384
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 385 EDNIMQIWQMAENI 398
Score = 75 (31.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 263 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 319
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 320 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 350
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 317 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 374
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 375 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 412
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 170 (64.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 55/186 (29%), Positives = 82/186 (44%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ ++ + P L A G D VR+W+ + G E E+ H SV V +A
Sbjct: 402 VTTVAMSPDGLYVAAGSLDKTVRVWDT-TTGYLVERLENPD-------GHKDSVYSVAFA 453
Query: 76 KHGRYIASGSDDQVILIHEKK-PGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWS 134
+G+ + SGS D+ I + E P G G K T GH V+ + +
Sbjct: 454 PNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGG-------KCHRTFEGHKDFVLSVCLT 506
Query: 135 PDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
PD + SGS D + W+ TG +L+GH + V VA P G+ A+ S D IW
Sbjct: 507 PDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Query: 195 RTSDWS 200
R S ++
Sbjct: 567 RYSAYT 572
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 66/241 (27%), Positives = 95/241 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE I+S+D A+G GD VR+W++ GK L+ TL G V
Sbjct: 357 HE-QDIYSLDFAGNGRYIASGSGDKTVRLWDIAE-GK----------LVYTLSIEDG-VT 403
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
V + G Y+A+GS D+ + + + G E PD GH V
Sbjct: 404 TVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERL---ENPD-----------GHKDSVYS 449
Query: 131 LNWSPDDSILASGSLDNTIHIWNMST-----------GICTAVLRGHSSLVKGVAWDPIG 179
+ ++P+ L SGSLD TI +W ++ G C GH V V P G
Sbjct: 450 VAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDG 509
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKP 239
++ S S D+ V W + GH S+ S + SP G+ T G +
Sbjct: 510 HWVMSGSKDRGVQFWDPITGNAQMMLQGH-KNSVIS-----VAPSPTGNLFATGSGDMRA 563
Query: 240 R 240
R
Sbjct: 564 R 564
Score = 133 (51.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 108 EPPDIENWKVAM-TLR----GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAV 162
E I W +A T++ GH D+ L+++ + +ASGS D T+ +W+++ G
Sbjct: 336 EDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYT 395
Query: 163 LRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT---DGH 208
L V VA P G ++A+ S DKTV +W T+ L R DGH
Sbjct: 396 LSIEDG-VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGH 443
Score = 42 (19.8 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 312 GSQDRTITVWTTASPR 327
GS D+TI +W PR
Sbjct: 462 GSLDKTIKLWELNLPR 477
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 57/191 (29%), Positives = 87/191 (45%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDP---SGECSPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W++S G AV GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + ES H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHSFES----------HKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH V +W++ + K + ++ A H V V W H S +DDQ ++I
Sbjct: 198 DHTVCLWDISAGPKEGKVVDAK----AVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S TT K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 254 WDTR--SNTTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 D 348
+
Sbjct: 384 N 384
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 384 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 384 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 384 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 384 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 384 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 384 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 421
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 139 (54.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 D 348
+
Sbjct: 384 N 384
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 169 (64.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 98 GSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG 157
G+G + G D+ + M L GH ++ LN+SP+ +A+GS DNT +W++
Sbjct: 380 GTGGLD-AFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQR 438
Query: 158 ICTAVLRGHSSLVKGVAWDPI-GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLG 214
C + H +LV GV ++P G+F+ + + D T IW WS GH K +G
Sbjct: 439 KCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMG 496
Score = 132 (51.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + + GH+ V D+ + D S+ +G LD +W++ TG C L GH +
Sbjct: 350 DLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
G+ + P G +A+ S D T +W
Sbjct: 410 YGLNFSPNGYHVATGSGDNTCKVW 433
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 45/137 (32%), Positives = 68/137 (49%)
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAM 119
A L H V C+ W+ +G Y+A+ S D+ + I E TE D E +
Sbjct: 372 AALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWE------ATE-------DDE-FDCLA 417
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTAVLRGHSSLVKGVAWDP 177
L+ HT DV + W P + +L SGS DN+I W + T L+GH++ V +A+ P
Sbjct: 418 VLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSP 477
Query: 178 IGSFIASQSDDKTVIIW 194
G+ +AS +D V +W
Sbjct: 478 NGNTLASADNDGNVFLW 494
Score = 153 (58.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 113 ENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI---CTAVLRGHSSL 169
++W+ L GH +V + WS + + LA+ S D ++ IW + C AVL+ H+
Sbjct: 366 DDWECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQD 425
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTS--DWSLAHRTDGH 208
VK V W P + S S D ++ WR DW+L + GH
Sbjct: 426 VKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGH 466
Score = 60 (26.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRD-HFGSV 69
H G +++S+ P FAT D VRI+N +T L+ + H S+
Sbjct: 289 HTG-RLWSVAAHPMLPLFATSSQDKSVRIYN-----------SNTYNLVHVIDGFHTRSI 336
Query: 70 NCVRWAKHGR-YIASGSDDQVILIHEK 95
V W R +A S D V+ I+EK
Sbjct: 337 RRVAWRPIERPVLAVASFDSVVSINEK 363
>UNIPROTKB|Q5JSH3 [details] [associations]
symbol:WDR44 "WD repeat-containing protein 44" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 GO:GO:0030334
GO:GO:0005874 HSSP:P38262 CTD:54521 HOVERGEN:HBG080376
OrthoDB:EOG4K6G3H EMBL:AK001978 EMBL:AK092077 EMBL:AK127556
EMBL:AM393332 EMBL:AM393787 EMBL:BX537578 EMBL:BX538087
EMBL:AL391474 EMBL:AL391803 EMBL:AL391830 EMBL:BC028697
IPI:IPI00444371 IPI:IPI00807730 IPI:IPI00872729
RefSeq:NP_001171894.1 RefSeq:NP_001171895.1 RefSeq:NP_061918.3
UniGene:Hs.98510 ProteinModelPortal:Q5JSH3 SMR:Q5JSH3 IntAct:Q5JSH3
STRING:Q5JSH3 PhosphoSite:Q5JSH3 DMDM:74762196 PaxDb:Q5JSH3
PRIDE:Q5JSH3 DNASU:54521 Ensembl:ENST00000254029
Ensembl:ENST00000371825 GeneID:54521 KEGG:hsa:54521 UCSC:uc004eqn.3
UCSC:uc004eqo.3 GeneCards:GC0XP117480 H-InvDB:HIX0017006
HGNC:HGNC:30512 HPA:HPA038084 neXtProt:NX_Q5JSH3
PharmGKB:PA128394668 InParanoid:Q5JSH3 OMA:KTDHTEV PhylomeDB:Q5JSH3
GenomeRNAi:54521 NextBio:56920 ArrayExpress:Q5JSH3 Bgee:Q5JSH3
CleanEx:HS_WDR44 Genevestigator:Q5JSH3 GermOnline:ENSG00000131725
Uniprot:Q5JSH3
Length = 913
Score = 172 (65.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 78/313 (24%), Positives = 129/313 (41%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
A+ G D+ VRIW +K+ F D+F ++ +++ GR S S Q
Sbjct: 527 ASAGQDNVVRIWALKNA---F--------------DYFNNMR-MKYNTEGR--VSPSPSQ 566
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASGS 144
L K G+ E PD +N + +GHTAD++DL+WS + +L+S S
Sbjct: 567 ESLSSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS-S 625
Query: 145 LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA- 202
+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 626 MDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVAL 684
Query: 203 -HRTDGHWAKSLGSTFFRRLGWSPCGH------FITTTH-GFQKPRHSAPVLER---GEW 251
+ DG + F + ++ G F T H + H R G
Sbjct: 685 WNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKVGRK 744
Query: 252 AATFDFL-GHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIA 310
+ L G N I+V N S R + G+ N +S+I S + +
Sbjct: 745 ITGIEPLPGENK--ILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLV 802
Query: 311 IGSQDRTITVWTT 323
GS+D+ + +W+T
Sbjct: 803 SGSEDKYVYIWST 815
Score = 150 (57.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 33 GDHKVRIWNMK--SVGKNFEN--DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
G+H +W MK G+ + ++ R+ A L++ F N +R + S S Q
Sbjct: 508 GEHMGAVWTMKFSHCGRLLASAGQDNVVRIWA-LKNAFDYFNNMRMKYNTEGRVSPSPSQ 566
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASGS 144
L K G+ E PD +N + +GHTAD++DL+WS + +L+S S
Sbjct: 567 ESLSSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS-S 625
Query: 145 LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA- 202
+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 626 MDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVAL 684
Query: 203 -HRTDG 207
+ DG
Sbjct: 685 WNEVDG 690
>TAIR|locus:2119151 [details] [associations]
symbol:CDC20.1 "AT4G33270" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSN2915879 EMBL:BT026138 IPI:IPI00524152 PIR:T05978
RefSeq:NP_195053.1 UniGene:At.368 SMR:Q9SZA4 IntAct:Q9SZA4
STRING:Q9SZA4 EnsemblPlants:AT4G33270.1 GeneID:829463
KEGG:ath:AT4G33270 TAIR:At4g33270 InParanoid:Q9SZA4
Genevestigator:Q9SZA4 Uniprot:Q9SZA4
Length = 457
Score = 146 (56.5 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 41/129 (31%), Positives = 58/129 (44%)
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAV------LRGHSSLV 170
+ T RGHT +V L WS LASG DN +HIW+ S + L H+S V
Sbjct: 258 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 317
Query: 171 KGVAWDPI-GSFIASQSD--DKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
K +AW P + +A+ D+T+ W T + + D GS L WS
Sbjct: 318 KALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVD------TGSQVCSLL-WSKNE 370
Query: 228 HFITTTHGF 236
+ ++HGF
Sbjct: 371 RELLSSHGF 379
Score = 66 (28.3 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
DH V +W+ S G E L T+ + G V + WA GR++A G ++ +
Sbjct: 159 DHTVYLWDA-STGSTSE--------LVTIDEEKGPVTSINWAPDGRHVAVGLNNSEV 206
Score = 42 (19.8 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 312 GSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH-FEVK 369
G +T+W S + + H T V+ ++ SPDG ++ + + D T+ ++ F V
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGH--TSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVP 435
Query: 370 ELGHRLSDAELDE 382
E + + + E
Sbjct: 436 ETAKKAAPKAVSE 448
>UNIPROTKB|F5GZ90 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
HGNC:HGNC:30288 IPI:IPI01011401 ProteinModelPortal:F5GZ90
SMR:F5GZ90 Ensembl:ENST00000542077 UCSC:uc010ptb.2
ArrayExpress:F5GZ90 Bgee:F5GZ90 Uniprot:F5GZ90
Length = 688
Score = 128 (50.1 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 34/83 (40%), Positives = 43/83 (51%)
Query: 134 SPDDSILASGSLDNTIHIWNMSTGICT-AVLRGHSSLVKGVAWDPIG-SFIASQSDDKTV 191
SPDD L SGS D +IW +ST VL GHS V V W P + IA+ SDD T+
Sbjct: 284 SPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTL 343
Query: 192 IIWRTSDWSLAHRTDGHWAKSLG 214
IWR + L + G ++G
Sbjct: 344 KIWRLNR-GLEEKPGGDKLSTVG 365
Score = 88 (36.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI- 182
H V DL W P + L + + D T W++ G +GH +K VA+ +
Sbjct: 55 HWNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVF 114
Query: 183 ASQSDDKTVIIWRT 196
+ D +++W T
Sbjct: 115 CTGGRDGNIMVWDT 128
Score = 84 (34.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 53/224 (23%), Positives = 86/224 (38%)
Query: 284 VKAAPV----GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASP--RPLFVAKHFFT 337
+K +PV G N T + S + GS D +W ++P P + H +
Sbjct: 261 LKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGH--S 318
Query: 338 QSVVDLSWSPDGYSLFA-CSLDGTVA----NFHFEVKELGHRLSDA--ELDELKRSRYGD 390
Q V + W P ++ A CS D T+ N E K G +LS + K SR G
Sbjct: 319 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL 378
Query: 391 VRGRLANLAETPAQL-LLEAASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTD 449
V + + TPA+ + + + + + A P+ S+ + KTS +
Sbjct: 379 VT--VTSSQSTPAKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPT-FSIKTSPAKAR 435
Query: 450 NGKKSGGVASDGLNKVSTSGRISSPVKQREYRRPDGRKRIIPEA 493
+ G S K +S ++S ++ R P I P A
Sbjct: 436 SPINRRGSVSSVSPKPPSSFKMS--IRNWVTRTPSSSPPITPPA 477
Score = 77 (32.2 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 35/164 (21%), Positives = 74/164 (45%)
Query: 8 WVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFG 67
W+ H +F + PG L+ T GD + W++K+ G+ L+ T + H
Sbjct: 52 WMAHWNA-VFDLAWVPGELKLVTAAGDQTAKFWDVKA-GE----------LIGTCKGHQC 99
Query: 68 SVNCVRWAKHGRYI-ASGSDDQVILIHE----KKPG--------SG---TTEFGS-GEPP 110
S+ V ++K + + +G D I++ + KK G SG T++ + +P
Sbjct: 100 SLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYRQVNQISGAHNTSDKQTPSKPK 159
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM 154
+N K V + + +++++++G++D I +W++
Sbjct: 160 KKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGIIKVWDL 203
Score = 58 (25.5 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 357 LDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQL 405
LDG V N H ++ L D D L ++ + G +++E P+ +
Sbjct: 535 LDGQVENLHLDLCCLAGNQEDLSKDSLGPTKSSKIEGAGTSISEPPSPI 583
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 150 (57.9 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 40/119 (33%), Positives = 60/119 (50%)
Query: 81 IASGSDDQVILIHEKKPGSGTTEFGSGEPP----DIENWKVAMTLRGHTAD-VVDLNWSP 135
+ +G + ++ + K G T GSG+ D+E + + L HT D V + +SP
Sbjct: 383 LLTGHEQEIYSLDFSKDGK-TLVSGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSP 439
Query: 136 DDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
D +A+GSLD I IW S+G L GH V VA+ P G ++ S S D T+ +W
Sbjct: 440 DGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 497
Score = 146 (56.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 41/122 (33%), Positives = 61/122 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DI +V L GH ++ L++S D L SGS D T+ +W++ G +L V
Sbjct: 374 DIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG-V 432
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
V + P G FIA+ S DK + IW TS +L + GH +S+ S F SP G ++
Sbjct: 433 TTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGH-EESVYSVAF-----SPDGKYL 485
Query: 231 TT 232
+
Sbjct: 486 VS 487
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 45/147 (30%), Positives = 64/147 (43%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDI- 112
S+ L+ L H SV V ++ G+Y+ SGS D I + E + S P +
Sbjct: 458 SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVA-------PSMY 510
Query: 113 -ENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
E T GH ++ + SPD + SGS D TI W+ + L+GH++ V
Sbjct: 511 KEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVI 570
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSD 198
VA P G A+ S D IW D
Sbjct: 571 SVAVSPNGHCFATGSGDLRARIWSYED 597
Score = 121 (47.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 1 MIAEKPSWVRHEG-MQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLL 59
++ E+ S + EG + + S+ P ATG D ++RIW D + +R+
Sbjct: 335 LLQEESS--KREGDLYVRSVAFSPDGKYLATGVEDQQIRIW-----------DIAQKRVY 381
Query: 60 ATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGS---------GTT-------- 102
L H + + ++K G+ + SGS D+ + + + + G G T
Sbjct: 382 RLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDG 441
Query: 103 EFGSGEPPD--IENWKVAMTL----RGHTADVVDLNWSPDDSILASGSLDNTIHIWNM 154
+F + D I W + TL GH V + +SPD L SGSLDNTI +W +
Sbjct: 442 QFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 499
Score = 111 (44.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 46/171 (26%), Positives = 75/171 (43%)
Query: 40 WNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGS 99
W + S N E S Q LL TL +H + VR++ G+++A+G + + ++ + G
Sbjct: 275 WTVTSNVPNKEPPISVQ-LLHTL-EHTSVICYVRFSADGKFLATGCN-RAAMVFNVETGK 331
Query: 100 GTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGIC 159
T E+ K R V + +SPD LA+G D I IW+++
Sbjct: 332 LITLLQE------ESSK-----REGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRV 380
Query: 160 TAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW--RTSDWSLA-HRTDG 207
+L GH + + + G + S S D+TV +W + L H DG
Sbjct: 381 YRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG 431
Score = 67 (28.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 309 IAIGSQDRTITVWTTASPRP-LFVAKHFFTQSVVDLSWSPDGY 350
I GS+DRTI W+ SP L + H SV+ ++ SP+G+
Sbjct: 539 IISGSKDRTIQFWSPDSPHSQLTLQGH--NNSVISVAVSPNGH 579
Score = 44 (20.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 312 GSQDRTITVWT---TASPRPLF-----VAKHFFT---QSVVDLSWSPDGYSLFACSLDGT 360
GS D TI +W ++ P + K FT ++ ++ SPDG + + S D T
Sbjct: 488 GSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRT 547
Query: 361 V 361
+
Sbjct: 548 I 548
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 151 (58.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + T GHT DV+ L+ +PD + SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKT 190
+ + P G+ A+ SDD T
Sbjct: 230 NAICFFPNGNAFATGSDDAT 249
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R TLR H + + W R + S S D ++I
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII 81
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 151 (58.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + T GHT DV+ L+ +PD + SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKT 190
+ + P G+ A+ SDD T
Sbjct: 230 NAICFFPNGNAFATGSDDAT 249
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R TLR H + + W R + S S D ++I
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII 81
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 151 (58.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + T GHT DV+ L+ +PD + SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKT 190
+ + P G+ A+ SDD T
Sbjct: 230 NAICFFPNGNAFATGSDDAT 249
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R TLR H + + W R + S S D ++I
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII 81
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 151 (58.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + T GHT DV+ L+ +PD + SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKT 190
+ + P G+ A+ SDD T
Sbjct: 230 NAICFFPNGNAFATGSDDAT 249
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R TLR H + + W R + S S D ++I
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII 81
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 151 (58.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + T GHT DV+ L+ +PD + SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKT 190
+ + P G+ A+ SDD T
Sbjct: 230 NAICFFPNGNAFATGSDDAT 249
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R TLR H + + W R + S S D ++I
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII 81
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 151 (58.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + T GHT DV+ L+ +PD + SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKT 190
+ + P G+ A+ SDD T
Sbjct: 230 NAICFFPNGNAFATGSDDAT 249
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R TLR H + + W R + S S D ++I
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII 81
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 151 (58.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIE + T GHT DV+ L+ +PD + SG+ D + +W++ G+C GH S +
Sbjct: 170 DIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
Query: 171 KGVAWDPIGSFIASQSDDKT 190
+ + P G+ A+ SDD T
Sbjct: 230 NAICFFPNGNAFATGSDDAT 249
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R TLR H + + W R + S S D ++I
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLII 81
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 78/329 (23%), Positives = 127/329 (38%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
L T + H V C+ W+ IAS + I I K G ++
Sbjct: 140 LHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGE----------------QIG 183
Query: 119 MTLRGHTADVVDLNWSP---DDS--ILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
TL+ H + L W P D + +LAS D I IW+ G L GH++ V +
Sbjct: 184 KTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCL 243
Query: 174 AWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAKSLG-STFF--RRLGWSPCGH 228
W G I S S D+TV +WR D + GH W +L +T + R + P
Sbjct: 244 RWGGEG-LIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKR 302
Query: 229 FIT--TTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKA 286
I T QK + + + A + G ++ + ++F N +++
Sbjct: 303 CIKPDTVEECQK-------VAQTRYEAALEIAGGER-LVSGSDDFTLFMWNPKETKQSIN 354
Query: 287 APVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWS 346
G +++ Y IA S D+++ +W + + L + V ++WS
Sbjct: 355 RMTGHMQLVNQVVFSPDTRY--IASASFDKSVKLWCGRTGKYL-ASLRGHVGPVYQVAWS 411
Query: 347 PDGYSLFACSLDGTVANFHFEVKELGHRL 375
D L + S D T+ F + K L + L
Sbjct: 412 ADSRLLVSGSADSTLKVFELKTKSLYYDL 440
Score = 141 (54.7 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K +LRGH V + WS D +L SGS D+T+ ++ + T L GH V V W
Sbjct: 393 KYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDW 452
Query: 176 DPIGSFIASQSDDKTVIIWR 195
P G+ + S DK + +WR
Sbjct: 453 SPEGTKVVSGGKDKVLKLWR 472
Score = 130 (50.8 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 36/107 (33%), Positives = 49/107 (45%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
+ GH V + +SPD +AS S D ++ +W TG A LRGH V VAW
Sbjct: 356 MTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSR 415
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
+ S S D T+ ++ SL + GH G F + WSP G
Sbjct: 416 LLVSGSADSTLKVFELKTKSLYYDLPGH-----GDEVFT-VDWSPEG 456
Score = 128 (50.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 41/137 (29%), Positives = 57/137 (41%)
Query: 84 GSDDQVILIHEKKPGSGTTEFGSGEPP----DIENWKVAMTLRGHTADVVDLNWSPDDSI 139
G + VI G G GSG+ DIE T + H + V+ + WSPD +
Sbjct: 103 GHGEPVISAQFSPDGRGLAS-GSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATK 161
Query: 140 LASGSLDNTIHIWNMSTGICTA-VLRGHSSLVKGVAW-----DPIGSFIASQSDDKTVII 193
+AS + I IWN TG L+ H + +AW DP +AS D + I
Sbjct: 162 IASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFI 221
Query: 194 WRTSDWSLAHRTDGHWA 210
W T ++ GH A
Sbjct: 222 WDTVQGTVVRCLSGHTA 238
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
+ + ++ GH V+ +SPD LASGS D T+ IW++ + + H S V +AW
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAW 155
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRT-DGH--WAKSL 213
P + IAS + + IW +T H W SL
Sbjct: 156 SPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSL 196
Score = 73 (30.8 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 23/86 (26%), Positives = 34/86 (39%)
Query: 13 GMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCV 72
G + S P A+G GD +RIW+++ + L T + H V C+
Sbjct: 105 GEPVISAQFSPDGRGLASGSGDQTMRIWDIE-----------LELPLHTCKSHKSWVLCI 153
Query: 73 RWAKHGRYIASGSDDQVILIHEKKPG 98
W+ IAS + I I K G
Sbjct: 154 AWSPDATKIASACKNGEICIWNAKTG 179
Score = 63 (27.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 46 GKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
G F D ++ L H SV C+RW G I SGS D+ +
Sbjct: 217 GNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEG-LIYSGSQDRTV 260
Score = 61 (26.5 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 24 GALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIAS 83
G R +G D + +WN K E +S R+ H VN V ++ RYIAS
Sbjct: 328 GGERLVSGSDDFTLFMWNPK------ETKQSINRMTG----HMQLVNQVVFSPDTRYIAS 377
Query: 84 GSDDQVI 90
S D+ +
Sbjct: 378 ASFDKSV 384
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
R A++ H V +++ GR +ASGS DQ + I
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRI 131
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 139 (54.0 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 165 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 215
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 216 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 274
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 275 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 328
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 329 EFILATGSADK 339
Score = 119 (46.9 bits), Expect = 0.00088, P = 0.00088
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 333 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 382
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 383 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 437
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 438 EDNIMQIWQMAENI 451
Score = 75 (31.5 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 316 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 372
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 373 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 403
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 370 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 427
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 428 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 465
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 139 (54.0 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ +I + S D ++ + K P SGE PD+
Sbjct: 165 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP---SGECNPDLR------ 215
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W+++ G A+ GHS++V+
Sbjct: 216 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 274
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 275 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE------VNCLSFNPYS 328
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 329 EFILATGSADK 339
Score = 119 (46.9 bits), Expect = 0.00088, P = 0.00088
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + L T H + V W+ H I +SG+D
Sbjct: 333 ATGSADKTVALWDLRNL----------KLKLHTFESHKDEIFQVHWSPHNETILASSGTD 382
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 383 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 437
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 438 EDNIMQIWQMAENI 451
Score = 75 (31.5 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 316 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHTFESHKDEIFQVHWSPHN 372
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 373 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 403
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/98 (22%), Positives = 37/98 (37%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 370 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 427
Query: 348 -DGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELK 384
+ + + + S D + + SD EL+
Sbjct: 428 NEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELE 465
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 143 (55.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICT--AVLRGHSSLVKGVAWDPIGSF 181
H +V + +SP +LA+G +D + +W + +G C L G ++ + + +D GS+
Sbjct: 316 HDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSY 375
Query: 182 IASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTF 217
+ + S+D IW D+ L H GH K L + F
Sbjct: 376 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARF 411
Score = 141 (54.7 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 126 ADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVL-RGHSSLVKGVAWDPIGSFIAS 184
+D + +SPD S +A+GS D +++WN+ TG L +GHSS + V+W G+F+AS
Sbjct: 533 SDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSWSLSGAFVAS 592
Query: 185 QSDDKTVIIW 194
++W
Sbjct: 593 VEKGSKAVLW 602
Score = 68 (29.0 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKS 44
H+G ++ ++ PG+ ATGG D +V++W + S
Sbjct: 316 HDG-EVNAVRFSPGSRLLATGGMDRRVKLWEVVS 348
Score = 50 (22.7 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 19/58 (32%), Positives = 24/58 (41%)
Query: 57 RLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHE--KKPGSGTTEFGSGEPPDI 112
RL TL H G V R+ I SGS D+ + + + K S T F DI
Sbjct: 394 RLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDI 451
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLD 358
+A GS D + +W + + + ++ +SWS G F S++
Sbjct: 547 VAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSWSLSG--AFVASVE 594
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 309 IAIGSQDRTITVWTTAS 325
I GS DRT+ +W S
Sbjct: 418 IVSGSYDRTLKLWDLRS 434
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 323 TASPRPLFVAKHFFTQS-VVDLSWSPDGYSLFACSLDGTV 361
T + R F A+ F S +++SPDG + A S DG +
Sbjct: 517 TNAVRQTFNAQGFKCGSDFTRVTFSPDGSFVAAGSADGVL 556
Score = 39 (18.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 27 RFATGGGDHKVRIWNMKS 44
R +G D +++W+++S
Sbjct: 417 RIVSGSYDRTLKLWDLRS 434
>UNIPROTKB|Q9NZJ0 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0009411 "response to UV" evidence=IDA]
[GO:0019985 "translesion synthesis" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0006513
"protein monoubiquitination" evidence=IDA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IDA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA;TAS] [GO:0000209 "protein polyubiquitination"
evidence=IDA;TAS] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0009411 EMBL:CH471100 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0031965 eggNOG:COG2319 GO:GO:0006511 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 OMA:ICTYFHR
OrthoDB:EOG4N5VWH EMBL:AF345896 EMBL:DQ641253 EMBL:AF195765
EMBL:AK000742 EMBL:AK001206 EMBL:AK001261 EMBL:AK027651
EMBL:AK292343 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
EMBL:BC033540 EMBL:BC033297 IPI:IPI00643808 IPI:IPI00827740
RefSeq:NP_057532.2 UniGene:Hs.656473 ProteinModelPortal:Q9NZJ0
SMR:Q9NZJ0 IntAct:Q9NZJ0 STRING:Q9NZJ0 PhosphoSite:Q9NZJ0
DMDM:302393825 PaxDb:Q9NZJ0 PRIDE:Q9NZJ0 DNASU:51514
Ensembl:ENST00000366991 GeneID:51514 KEGG:hsa:51514 UCSC:uc001hiz.4
GeneCards:GC01P212208 H-InvDB:HIX0020157 HGNC:HGNC:30288
HPA:HPA028016 MIM:610617 neXtProt:NX_Q9NZJ0 PharmGKB:PA142671941
InParanoid:Q9NZJ0 GenomeRNAi:51514 NextBio:55210
ArrayExpress:Q9NZJ0 Bgee:Q9NZJ0 CleanEx:HS_DTL
Genevestigator:Q9NZJ0 Uniprot:Q9NZJ0
Length = 730
Score = 128 (50.1 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 34/83 (40%), Positives = 43/83 (51%)
Query: 134 SPDDSILASGSLDNTIHIWNMSTGICT-AVLRGHSSLVKGVAWDPIG-SFIASQSDDKTV 191
SPDD L SGS D +IW +ST VL GHS V V W P + IA+ SDD T+
Sbjct: 326 SPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTL 385
Query: 192 IIWRTSDWSLAHRTDGHWAKSLG 214
IWR + L + G ++G
Sbjct: 386 KIWRLNR-GLEEKPGGDKLSTVG 407
Score = 88 (36.0 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI- 182
H V DL W P + L + + D T W++ G +GH +K VA+ +
Sbjct: 97 HWNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVF 156
Query: 183 ASQSDDKTVIIWRT 196
+ D +++W T
Sbjct: 157 CTGGRDGNIMVWDT 170
Score = 84 (34.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 53/224 (23%), Positives = 86/224 (38%)
Query: 284 VKAAPV----GWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASP--RPLFVAKHFFT 337
+K +PV G N T + S + GS D +W ++P P + H +
Sbjct: 303 LKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGH--S 360
Query: 338 QSVVDLSWSPDGYSLFA-CSLDGTVA----NFHFEVKELGHRLSDA--ELDELKRSRYGD 390
Q V + W P ++ A CS D T+ N E K G +LS + K SR G
Sbjct: 361 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL 420
Query: 391 VRGRLANLAETPAQL-LLEAASAKETTTKKVVSDVQAIQAPVKSSVNIGVTTKTSEPQTD 449
V + + TPA+ + + + + + A P+ S+ + KTS +
Sbjct: 421 VT--VTSSQSTPAKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPT-FSIKTSPAKAR 477
Query: 450 NGKKSGGVASDGLNKVSTSGRISSPVKQREYRRPDGRKRIIPEA 493
+ G S K +S ++S ++ R P I P A
Sbjct: 478 SPINRRGSVSSVSPKPPSSFKMS--IRNWVTRTPSSSPPITPPA 519
Score = 77 (32.2 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 35/164 (21%), Positives = 74/164 (45%)
Query: 8 WVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFG 67
W+ H +F + PG L+ T GD + W++K+ G+ L+ T + H
Sbjct: 94 WMAHWNA-VFDLAWVPGELKLVTAAGDQTAKFWDVKA-GE----------LIGTCKGHQC 141
Query: 68 SVNCVRWAKHGRYI-ASGSDDQVILIHE----KKPG--------SG---TTEFGS-GEPP 110
S+ V ++K + + +G D I++ + KK G SG T++ + +P
Sbjct: 142 SLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYRQVNQISGAHNTSDKQTPSKPK 201
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNM 154
+N K V + + +++++++G++D I +W++
Sbjct: 202 KKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGIIKVWDL 245
Score = 58 (25.5 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 357 LDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQL 405
LDG V N H ++ L D D L ++ + G +++E P+ +
Sbjct: 577 LDGQVENLHLDLCCLAGNQEDLSKDSLGPTKSSKIEGAGTSISEPPSPI 625
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 137 (53.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 69 VNCVRWAKHGR---YIASGSDDQVILIHEKKP--GSGTTEFGSGEPPDIENWKVAMTLRG 123
V C W +HGR + SG D V+ + + SG+ + + ++ ++ L G
Sbjct: 255 VEC-NW-RHGRCRQVVLSGHSDGVMCLQLVRNILASGSYD-ATIRLWNLATFQQVALLEG 311
Query: 124 HTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIA 183
H++ V L + D L SGS+D TI IWN T C ++L GH+ V + +D + +
Sbjct: 312 HSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLLV 367
Query: 184 SQSDDKTVIIWRTS 197
S S D TV +W S
Sbjct: 368 SGSADCTVKLWHFS 381
Score = 129 (50.5 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 44/111 (39%), Positives = 59/111 (53%)
Query: 114 NWKVA----MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
NW+ + L GH+ V+ L + ILASGS D TI +WN++T A+L GHSS
Sbjct: 258 NWRHGRCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSG 315
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIW--RTSDW-SLAHRTDGHWAKSLGSTF 217
V + +D + S S DKT+ IW RTS+ S+ H GH L TF
Sbjct: 316 VTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILH---GHTDSVLCLTF 361
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 31/88 (35%), Positives = 42/88 (47%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
L GHT V+ L + D ++L SGS D T+ +W+ S G LRGH+ V V
Sbjct: 349 LHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRG 405
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+ S SDD T+ IW + H H
Sbjct: 406 LVLSGSDDSTIKIWSLETNTCLHTFSAH 433
Score = 80 (33.2 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 308 VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDL-SWSPDGYSLFACSLDGTVANFHF 366
++ GS D TI +W+ + L H F+ + + S + LF+CSLDGT+ +
Sbjct: 406 LVLSGSDDSTIKIWSLETNTCL----HTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDI 461
Query: 367 EVKELGHRL 375
E K+ H L
Sbjct: 462 EKKKCVHTL 470
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 173 (66.0 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 90 ILIHEKKPGSGTTEFGS-GEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
I H+ +GT + G D+ + M L GH ++ +++SP+ +A+GS DNT
Sbjct: 370 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNT 429
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPI-GSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
+W++ C + H +LV GV ++PI G F+ + + D T IW WS G
Sbjct: 430 CKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAG 489
Query: 208 HWAKSLG 214
H K +G
Sbjct: 490 HEGKVMG 496
Score = 138 (53.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + + GH+ V D+ + D S+ +G LD +W++ TG C L GH +
Sbjct: 350 DLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 409
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
G+++ P G IA+ S D T +W
Sbjct: 410 YGISFSPNGYHIATGSGDNTCKVW 433
Score = 62 (26.9 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 298 IGGKESQPYN--VIAIGSQDRTITVWTTASPRPL-FVAKHFFTQSVVDLSWSPDGYSLFA 354
+ G + +P + + G+ D T +WT PL +A H V+ L S DG +
Sbjct: 451 VTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGH--EGKVMGLDISSDGQLIAT 508
Query: 355 CSLDGT 360
CS D T
Sbjct: 509 CSYDRT 514
Score = 40 (19.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 26 LRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
+ A+ D V++W++ S DE +A + H V V W GR++ +
Sbjct: 293 VNLASCAADGSVKLWSLDS-------DEP----VADIEGHTVRVARVMWHPSGRFLGTTC 341
Query: 86 DDQ 88
D+
Sbjct: 342 YDR 344
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 135 (52.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 87 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 137
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 138 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 196
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 197 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 250
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 251 EFILATGSADK 261
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 164 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 219
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 220 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 265
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 266 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 313
Score = 76 (31.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 238 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 294
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 295 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 325
Score = 39 (18.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 292 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 349
Query: 348 D 348
+
Sbjct: 350 N 350
>UNIPROTKB|A4R7U3 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:242507 "Magnaporthe oryzae 70-15"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM001234 OrthoDB:EOG4CVKH5 RefSeq:XP_003716845.1
ProteinModelPortal:A4R7U3 STRING:A4R7U3 GeneID:2676736
KEGG:mgr:MGG_03150 Uniprot:A4R7U3
Length = 446
Score = 166 (63.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 54/163 (33%), Positives = 76/163 (46%)
Query: 50 ENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEP 109
+ND+ + L L H + ++ G+Y+A+ S D+ I I E + G+ E
Sbjct: 130 DNDDDWEFTLV-LEGHENEIKSAAFSPSGQYLATCSRDKSIWIWE--------DVGANEG 180
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPD----------DSILASGSLDNTIHIWNMS-TG- 157
D W+ L H DV + W PD +LAS S D+TI IW G
Sbjct: 181 DD--EWETVAVLTEHDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGE 238
Query: 158 -ICTAVLRGHSSLVKGVAWDP-IGS--F--IASQSDDKTVIIW 194
C AVL GHSS V GV W+P + + F + S S DKT+ +W
Sbjct: 239 WACVAVLEGHSSTVWGVQWEPKVDNTKFPRLISWSADKTIRVW 281
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/151 (31%), Positives = 63/151 (41%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE +I S P AT D + IW + VG N E D+ + + A L +H G V
Sbjct: 144 HEN-EIKSAAFSPSGQYLATCSRDKSIWIW--EDVGAN-EGDDEWETV-AVLTEHDGDVK 198
Query: 71 CVRWAKH--GRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADV 128
CV W GR I+S S D + E G GE W L GH++ V
Sbjct: 199 CVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGE------WACVAVLEGHSSTV 252
Query: 129 VDLNWSPD-DSI----LASGSLDNTIHIWNM 154
+ W P D+ L S S D TI +W +
Sbjct: 253 WGVQWEPKVDNTKFPRLISWSADKTIRVWTL 283
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 133 (51.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 40/126 (31%), Positives = 57/126 (45%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E GH+ +V + ++ D S+LASG LD+ +W++ TG +L GH +
Sbjct: 320 DVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREI 379
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWA-KSLGSTFFRRLGWSPCGHF 229
G+ W G + S S D V W D T G A KS+ S R S F
Sbjct: 380 FGLDWGVDGYRVLSGSGDGWVKCW---DLRQVKNTGGIGAHKSVVSDV-RWYKGSESASF 435
Query: 230 ITTTHG 235
+ TT G
Sbjct: 436 LPTTEG 441
Score = 102 (41.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 28/108 (25%), Positives = 47/108 (43%)
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSI-----------LASGSLDNTIHIWNMSTGICT 160
+ N + ++++GHT V L+W P ++ SG + + +W++
Sbjct: 226 VPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPL 285
Query: 161 AVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
A L GHS V + P G +IAS S D T +W + +GH
Sbjct: 286 ATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGH 333
Score = 82 (33.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 7 SWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHF 66
SW G + +V A+ F +GGG+ V +W++ + D+ LATL H
Sbjct: 246 SWF--PGATLPESNVSESAVNFVSGGGEGNVCLWSL-------DKDQP----LATLEGHS 292
Query: 67 GSVNCVRWAKHGRYIASGSDD 87
G V + G+YIAS S D
Sbjct: 293 GRVCRTEFHPSGKYIASASYD 313
Score = 65 (27.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 307 NVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
+++A G D VW + R + + + + + L W DGY + + S DG V +
Sbjct: 347 SLLASGGLDSIGRVWDLRTGRTVMILEGHIRE-IFGLDWGVDGYRVLSGSGDGWVKCWDL 405
Query: 367 -EVKELG 372
+VK G
Sbjct: 406 RQVKNTG 412
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 169 (64.5 bits), Expect = 6.0e-09, Sum P(4) = 6.0e-09
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 102 TEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTA 161
++ GS D+E K+ TL GH A++ L++ P +ASGS D I +W++ C
Sbjct: 82 SQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF 141
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
RGHS V+ + + P G ++AS +DD TV +W + + GH
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Score = 155 (59.6 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 41/163 (25%), Positives = 73/163 (44%)
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
M+L GHT+ V + + + ++ +GS +I +W++ L GH + + + + P
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY 116
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
G F+AS S D + +W R GH S R L +SP G ++ +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGH------SQAVRCLRFSPDGKWLASA----A 166
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASS 281
H+ + + +F GH P+ VV+F+ + + S SS
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Score = 135 (52.6 bits), Expect = 5.7e-07, Sum P(4) = 5.7e-07
Identities = 45/165 (27%), Positives = 71/165 (43%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DI RGH+ V L +SPD LAS + D+T+ +W+++ G + GH+ V
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG---WSPCG 227
V + P +AS S D+T+ W + + +G + S F G +S C
Sbjct: 193 NVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE-PGPVRSVLFNPDGCCLYSGCQ 251
Query: 228 HFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS 272
+ +G++ R VL W D N +I V F+ S
Sbjct: 252 DSLRV-YGWEPERCFDVVLVN--WGKVADLAICNDQLIGVAFSQS 293
Score = 56 (24.8 bits), Expect = 5.7e-07, Sum P(4) = 5.7e-07
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDD 87
D ++L TL H ++ + + +G ++ASGS D
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 126
Score = 46 (21.3 bits), Expect = 6.0e-09, Sum P(4) = 6.0e-09
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 408 EAASAKETTTKKVVSDVQAIQAPVKS-SVNIGVTTKTSEP 446
+AA+ KE + DVQ Q PV + V + TS P
Sbjct: 410 DAATVKEVSKPSPAMDVQLPQLPVPNLEVPARPSVMTSTP 449
Score = 42 (19.8 bits), Expect = 6.0e-09, Sum P(4) = 6.0e-09
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 483 PDGRKR--IIPEAVGVPVQQEGVTGGAQSQL---HD--FPPVSSDHR 522
P G K +P AV VP Q E V A SQ+ HD F ++S H+
Sbjct: 465 PIGLKASDFLP-AVKVPQQAELVDEDAMSQIRKGHDTMFVVLTSRHK 510
Score = 39 (18.8 bits), Expect = 6.0e-09, Sum P(4) = 6.0e-09
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 65 HFGSVNCVRWAK-HGRYIASGSDD-QVILIHEKKP 97
H +V+ + K GR +A+G DD +V L KP
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP 53
>TAIR|locus:2119141 [details] [associations]
symbol:CDC20.2 "AT4G33260" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0033597 "mitotic checkpoint complex" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AL035678 EMBL:AL161583
HSSP:P16649 GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514
EMBL:AF029263 IPI:IPI00519553 PIR:T05977 RefSeq:NP_195052.1
UniGene:At.48930 ProteinModelPortal:Q9S7I8 SMR:Q9S7I8 STRING:Q9S7I8
EnsemblPlants:AT4G33260.1 GeneID:829462 KEGG:ath:AT4G33260
TAIR:At4g33260 InParanoid:Q9S7I8 OMA:AVALDNC PhylomeDB:Q9S7I8
ProtClustDB:CLSN2915879 ArrayExpress:Q9S7I8 Genevestigator:Q9S7I8
Uniprot:Q9S7I8
Length = 447
Score = 146 (56.5 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 41/129 (31%), Positives = 58/129 (44%)
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAV------LRGHSSLV 170
+ T RGHT +V L WS LASG DN +HIW+ S + L H+S V
Sbjct: 248 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 307
Query: 171 KGVAWDPI-GSFIASQSD--DKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG 227
K +AW P + +A+ D+T+ W T + + D GS L WS
Sbjct: 308 KALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVD------TGSQVCSLL-WSKNE 360
Query: 228 HFITTTHGF 236
+ ++HGF
Sbjct: 361 RELLSSHGF 369
Score = 66 (28.3 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
DH V +W+ S G E L T+ + G V + WA GR++A G ++ +
Sbjct: 149 DHTVYLWDA-STGSTSE--------LVTIDEEKGPVTSINWAPDGRHVAVGLNNSEV 196
Score = 40 (19.1 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 312 GSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH-FEVK 369
G +T+W S + + H T V+ ++ SPDG ++ + + D T+ ++ F V
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGH--TSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVP 425
Query: 370 ELGHRLSDAELDE 382
E + + + E
Sbjct: 426 ETAKKAAPKAVAE 438
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 168 (64.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 50/179 (27%), Positives = 78/179 (43%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ ++ + P A G D VR+W++ G E E H SV V ++
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQ-GCPVERLEGPD-------GHKDSVYSVAFS 483
Query: 76 KHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP 135
+GR + +GS D+ I + E G + G + + T GH V+ + +P
Sbjct: 484 PNGRDLVTGSLDKTIKLWELATPRGNMQ-NQGS----KGGRCVKTFEGHRDFVLSVALTP 538
Query: 136 DDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
D+ + SGS D + W+ TG +L+GH + V VA P G F A+ S D IW
Sbjct: 539 DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 159 (61.0 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 67/242 (27%), Positives = 96/242 (39%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE I+S+D A+G GD VR+W++ EN T + T+ D V
Sbjct: 387 HE-QDIYSLDFARDGRTIASGSGDRTVRLWDI-------EN--GTALTVFTIED---GVT 433
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVD 130
V + +Y+A+GS D+ + + + G E PD GH V
Sbjct: 434 TVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERL---EGPD-----------GHKDSVYS 479
Query: 131 LNWSPDDSILASGSLDNTIHIWNMST------------GICTAVLRGHSSLVKGVAWDPI 178
+ +SP+ L +GSLD TI +W ++T G C GH V VA P
Sbjct: 480 VAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPD 539
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
++ S S D+ V W S GH S+ S + SP G F T G +
Sbjct: 540 NQWVMSGSKDRGVQFWDPRTGSTQLMLQGH-KNSVIS-----VAPSPTGGFFATGSGDMR 593
Query: 239 PR 240
R
Sbjct: 594 AR 595
Score = 121 (47.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DI + + GH D+ L+++ D +ASGS D T+ +W++ G V V
Sbjct: 374 DITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDG-V 432
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
VA P ++A+ S DK+V +W + R +G
Sbjct: 433 TTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEG 469
Score = 52 (23.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 309 IAIGSQDRTITVWTTASPR 327
+ GS D+TI +W A+PR
Sbjct: 489 LVTGSLDKTIKLWELATPR 507
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 165 (63.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 45/144 (31%), Positives = 65/144 (45%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPP-DI 112
+T + T H V VR G A+ S+DQ I + E E +
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVEC 282
Query: 113 ENW--KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
W + A + A + LASGS D TI IW++S G+C L GH + V
Sbjct: 283 IAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWV 342
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+G+A+ P G ++ S SDDKT+ +W
Sbjct: 343 RGLAFHPGGKYLVSASDDKTIRVW 366
Score = 143 (55.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI-CTAVLRGHSSL 169
D E + +L+GHT V D+ + +LAS S D +I +W+ C + GH
Sbjct: 136 DFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHN 195
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAK 211
V VA+ P G ++ S S D+T+ +W + GH W +
Sbjct: 196 VSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVR 239
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/188 (25%), Positives = 76/188 (40%)
Query: 12 EGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNC 71
E +++ + ++ G++ FAT D +R+W S E LRDH +V C
Sbjct: 236 EWVRMVRVHIE-GSI-FATCSNDQTIRVWLTNSKDCKVE-----------LRDHEHTVEC 282
Query: 72 VRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA-----MTLRGHTA 126
+ WA AS ++ ++K G I W V+ +TL GH
Sbjct: 283 IAWAPEAA--ASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDN 340
Query: 127 DVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQS 186
V L + P L S S D TI +W++ C L H + + ++ S S
Sbjct: 341 WVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Query: 187 DDKTVIIW 194
D+TV +W
Sbjct: 401 VDQTVKVW 408
Score = 130 (50.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 38/143 (26%), Positives = 62/143 (43%)
Query: 113 ENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKG 172
++++ T+ GH +V + + P + S S D TI +W ++TG C GH V+
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRM 240
Query: 173 VAWDPIGSFIASQSDDKTVIIWRTS--DWSLAHRTDGHWAKSLGSTFFRRLGWSP--CGH 228
V GS A+ S+D+T+ +W T+ D + R H + + W+P
Sbjct: 241 VRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIA--------WAPEAAAS 292
Query: 229 FITTTHGF--QKPRHSAPVLERG 249
I G +K H P L G
Sbjct: 293 AINEAAGADNKKGHHQGPFLASG 315
Score = 129 (50.5 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+L GH A + + + P +++ S S D TI IW+ TG L+GH+ V+ VA+D G
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 180 SFIASQSDDKTVIIW 194
+AS S D ++ +W
Sbjct: 163 KLLASCSADLSIKLW 177
Score = 63 (27.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 279 ASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLF-VAKHFFT 337
A + E A+ + G G P+ +A GS+D+TI +W + L ++ H
Sbjct: 284 AWAPEAAASAINEAAGADNKKGHHQGPF--LASGSRDKTIRIWDVSVGLCLLTLSGH--D 339
Query: 338 QSVVDLSWSPDGYSLFACSLDGTV 361
V L++ P G L + S D T+
Sbjct: 340 NWVRGLAFHPGGKYLVSASDDKTI 363
Score = 52 (23.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 307 NVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPD 348
++ A S D+TI VW T S + V +V ++W+P+
Sbjct: 248 SIFATCSNDQTIRVWLTNS-KDCKVELRDHEHTVECIAWAPE 288
Score = 51 (23.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 291 WTNGTS-KIGGKESQPYNVIAIGSQDRTITVWTTASPR---PLFVAKHFFT 337
W G + GGK Y V A S D+TI VW + R L+ +HF T
Sbjct: 341 WVRGLAFHPGGK----YLVSA--SDDKTIRVWDLRNKRCMKTLYAHQHFCT 385
Score = 44 (20.5 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 302 ESQPYNVIAIGSQDRTITVW 321
++ PY VI+ GS D+T+ VW
Sbjct: 391 KAHPY-VIS-GSVDQTVKVW 408
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 313 SQDRTITVWTTASPRPLFVAKHF--FTQSVVDLSWSPDGYSLFA-CSLDGTVANFHFEVK 369
S+DRTI +W A+ + K + + V + +G S+FA CS D T+ + K
Sbjct: 212 SRDRTIKMWEVATG---YCVKTYTGHREWVRMVRVHIEG-SIFATCSNDQTIRVWLTNSK 267
Query: 370 ELGHRLSDAE 379
+ L D E
Sbjct: 268 DCKVELRDHE 277
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 140 (54.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 31/84 (36%), Positives = 42/84 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E + GH V L++ D S+L +G LD +W++ TG C L GH V
Sbjct: 381 DLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAV 440
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
GV + P G IA+ S D T IW
Sbjct: 441 FGVDFSPNGFHIATGSQDNTCKIW 464
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + M L GH V +++SP+ +A+GS DNT IW++ + H++L+
Sbjct: 423 DLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLI 482
Query: 171 KGVAWDP-IGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
V + GSF+ + S D T IW W GH
Sbjct: 483 SDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGH 521
Score = 75 (31.5 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 309 IAIGSQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPD-GYSLFACSLDGTV---AN 363
IA GSQD T +W +P++ + H T + D+ + + G L CS D T +N
Sbjct: 452 IATGSQDNTCKIWDLRRRQPVYTIPAH--TNLISDVKYQQECGSFLVTCSYDSTTKIWSN 509
Query: 364 FHFE-VKEL-GHRLSDAELDELKRSRY 388
++ +K L GH +D S+Y
Sbjct: 510 KTWQPLKTLQGHDNKVISVDIAPNSQY 536
>RGD|727965 [details] [associations]
symbol:Wdr44 "WD repeat domain 44" species:10116 "Rattus
norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005874 "microtubule" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=IDA] [GO:0030334 "regulation of cell
migration" evidence=IMP] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:727965 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 GO:GO:0030334
GO:GO:0005874 GO:GO:0017137 HSSP:P38262 HOGENOM:HOG000267152
HOVERGEN:HBG080376 OrthoDB:EOG4K6G3H EMBL:AF130121 IPI:IPI01016390
UniGene:Rn.79380 ProteinModelPortal:Q9R037 STRING:Q9R037
PhosphoSite:Q9R037 PRIDE:Q9R037 UCSC:RGD:727965 ArrayExpress:Q9R037
Genevestigator:Q9R037 GermOnline:ENSRNOG00000029068 Uniprot:Q9R037
Length = 908
Score = 170 (64.9 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 78/313 (24%), Positives = 129/313 (41%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
A+ G D+ VRIW +K+ F D+F ++ +++ GR S S Q
Sbjct: 522 ASAGQDNIVRIWALKNA---F--------------DYFNNMR-MKYNTEGR--VSPSPSQ 561
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASGS 144
L K G+ E PD +N + +GHTAD++DL+WS + +L+S S
Sbjct: 562 ESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS-S 620
Query: 145 LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA- 202
+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 621 MDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVAL 679
Query: 203 -HRTDGHWAKSLGSTFFRRLGWSPCGH------FITTTH-GFQKPRHSAPVLER---GEW 251
+ DG + F + ++ G F T H + H R G
Sbjct: 680 WNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKVGRK 739
Query: 252 AATFDFL-GHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIA 310
+ L G N I+V N S R + G+ N +S+I S + +
Sbjct: 740 ITGIEPLPGENK--ILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLV 797
Query: 311 IGSQDRTITVWTT 323
GS+D+ + +W+T
Sbjct: 798 SGSEDKYVYIWST 810
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 33 GDHKVRIWNMK--SVGKNFEN--DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
G+H +W MK G+ + ++ R+ A L++ F N +R + S S Q
Sbjct: 503 GEHMGAVWTMKFSHCGRLLASAGQDNIVRIWA-LKNAFDYFNNMRMKYNTEGRVSPSPSQ 561
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASGS 144
L K G+ E PD +N + +GHTAD++DL+WS + +L+S S
Sbjct: 562 ESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS-S 620
Query: 145 LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA- 202
+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 621 MDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVAL 679
Query: 203 -HRTDG 207
+ DG
Sbjct: 680 WNEVDG 685
>MGI|MGI:1919654 [details] [associations]
symbol:Wdr44 "WD repeat domain 44" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005874 "microtubule" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=ISO] [GO:0030334 "regulation of cell migration"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919654 GO:GO:0005829 GO:GO:0005794
GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008
GO:GO:0030334 GO:GO:0005874 GeneTree:ENSGT00530000063479
HSSP:P38262 CTD:54521 HOGENOM:HOG000267152 HOVERGEN:HBG080376
OrthoDB:EOG4K6G3H EMBL:AK088885 EMBL:AK139877 EMBL:BC068151
EMBL:BC049191 IPI:IPI00308560 IPI:IPI00676517 RefSeq:NP_780389.2
UniGene:Mm.423 ProteinModelPortal:Q6NVE8 SMR:Q6NVE8 STRING:Q6NVE8
PhosphoSite:Q6NVE8 PaxDb:Q6NVE8 PRIDE:Q6NVE8
Ensembl:ENSMUST00000035766 Ensembl:ENSMUST00000101670 GeneID:72404
KEGG:mmu:72404 UCSC:uc009suy.1 InParanoid:Q6NVE8 NextBio:336206
Bgee:Q6NVE8 CleanEx:MM_WDR44 Genevestigator:Q6NVE8
GermOnline:ENSMUSG00000036769 Uniprot:Q6NVE8
Length = 915
Score = 170 (64.9 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 78/313 (24%), Positives = 129/313 (41%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
A+ G D+ VRIW +K+ F D+F ++ +++ GR S S Q
Sbjct: 529 ASAGQDNIVRIWALKNA---F--------------DYFNNMR-MKYNTEGR--VSPSPSQ 568
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASGS 144
L K G+ E PD +N + +GHTAD++DL+WS + +L+S S
Sbjct: 569 ESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS-S 627
Query: 145 LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA- 202
+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 628 MDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVAL 686
Query: 203 -HRTDGHWAKSLGSTFFRRLGWSPCGH------FITTTH-GFQKPRHSAPVLER---GEW 251
+ DG + F + ++ G F T H + H R G
Sbjct: 687 WNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIFYDTEHLKYHTQIHVRSTRGRNKVGRK 746
Query: 252 AATFDFL-GHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIA 310
+ L G N I+V N S R + G+ N +S+I S + +
Sbjct: 747 ITGIEPLPGENK--ILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDFTYLV 804
Query: 311 IGSQDRTITVWTT 323
GS+D+ + +W+T
Sbjct: 805 SGSEDKYVYIWST 817
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 33 GDHKVRIWNMK--SVGKNFEN--DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQ 88
G+H +W MK G+ + ++ R+ A L++ F N +R + S S Q
Sbjct: 510 GEHMGAVWTMKFSHCGRLLASAGQDNIVRIWA-LKNAFDYFNNMRMKYNTEGRVSPSPSQ 568
Query: 89 VILIHEKKPGSGTTEFGSGEPPDIEN----WKVAMTLRGHTADVVDLNWSPDDSILASGS 144
L K G+ E PD +N + +GHTAD++DL+WS + +L+S S
Sbjct: 569 ESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSS-S 627
Query: 145 LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS-FIASQSDDKTVIIWRTSDWSLA- 202
+D T+ +W++S C + H V +A+ P + S S D + +W D +A
Sbjct: 628 MDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVAL 686
Query: 203 -HRTDG 207
+ DG
Sbjct: 687 WNEVDG 692
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 147 (56.8 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 36/102 (35%), Positives = 50/102 (49%)
Query: 117 VAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWD 176
V +T GHT + + P S LA+ S D+TI +W+++ G CT L GH+ V W
Sbjct: 394 VLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWH 453
Query: 177 PIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF 218
G F+AS S D T IW + + GH S+ S F
Sbjct: 454 SCGDFVASASLDMTSKIWDVNSERCRYTLYGH-TDSVNSIEF 494
Score = 143 (55.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + +TL GH V W +AS SLD T IW++++ C L GH+ V
Sbjct: 430 DLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSV 489
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFI 230
+ + P + + + S DKT+ +W GH +TF +P GH I
Sbjct: 490 NSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATF------TPRGHII 543
Query: 231 TT 232
+
Sbjct: 544 AS 545
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 27/84 (32%), Positives = 39/84 (46%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ + + TL GHT V + + P +IL + S D T+ +W+ TG C L GH V
Sbjct: 472 DVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSV 531
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+ P G IAS +W
Sbjct: 532 NDATFTPRGHIIASCDARGVTKLW 555
Score = 69 (29.3 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 295 TSKIGGKESQPY-NVIAIGSQDRTITVW---TTASPRPLFVAKHFFTQSVVDLSWSPDGY 350
T + E P+ N++ S D+T++VW T + L+ H SV D +++P G+
Sbjct: 486 TDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMH----SVNDATFTPRGH 541
Query: 351 SLFACSLDGTVANFHF 366
+ +C G + F
Sbjct: 542 IIASCDARGVTKLWDF 557
Score = 46 (21.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/73 (26%), Positives = 28/73 (38%)
Query: 541 RGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTT 600
RG + S D + GVT + + I + + V +QSG V A S
Sbjct: 539 RGHIIASCDAR---GVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGI-- 593
Query: 601 TLSIRVFDKKEGE 613
I + D K G+
Sbjct: 594 ---IHLLDLKSGQ 603
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 170 (64.9 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+E K+ TL GH A + L++ P LASGS+D+ I +W++ C +GH+ V
Sbjct: 91 DLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAV 150
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+ +A+ P G ++AS SDD TV +W
Sbjct: 151 RCLAFSPDGKWLASASDDSTVKLW 174
Score = 139 (54.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 44/165 (26%), Positives = 74/165 (44%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ +GHT V L +SPD LAS S D+T+ +W++ G H+S V
Sbjct: 133 DVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAV 192
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLG---WSPCG 227
V + P +AS S D+TV +W +++ ++G + S F G +S
Sbjct: 193 NVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGV-VRSVLFNPDGSCLYSGSE 251
Query: 228 HFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHS 272
+ + +G++ P V+ G W D N +I V ++H+
Sbjct: 252 NTLRV-YGWE-PDRCFDVVHVG-WGKVSDLAISNNQMIAVSYSHT 293
Score = 60 (26.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
D ++L TL H S++ + + G Y+ASGS D I
Sbjct: 91 DLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNI 129
Score = 51 (23.0 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGS 85
ATGG D +V IW +V K + +L H +V C+++ + +GS
Sbjct: 37 ATGGEDCRVNIW---AVSK--------PNCIMSLTGHTSAVGCIQFNSSEERVVAGS 82
Score = 37 (18.1 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 568 IEKVPASAAGDGNVGVEQSGNVKASGSVAATTTTLSIRVF 607
+EK + +G GV +S GS + + ++RV+
Sbjct: 218 LEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVY 257
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 169 (64.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 54/208 (25%), Positives = 87/208 (41%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ ++DV FA+ D +RIW M G+ + + + G++ C R
Sbjct: 379 VLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSV-----GTICCSRLK 433
Query: 76 KHGRYIASGSDDQVILIH---EKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLN 132
+ ++ +GS D + + E P T G D+ + T R H D+ L
Sbjct: 434 ES--FLVTGSQDCTVKLWPLPEALPSKNTASDG-----DLIPLQAQSTQRCHDKDINSLA 486
Query: 133 WSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVI 192
SP+D +LA+GS D T +W + V GH + V + P +A+ S D T+
Sbjct: 487 VSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIK 546
Query: 193 IWRTSDWSLAHRTDGHWAKSLGSTFFRR 220
+W D+S +GH A L F R
Sbjct: 547 LWALQDFSCLKTFEGHDASVLKVAFVSR 574
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 143 (55.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 46/142 (32%), Positives = 60/142 (42%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
L+ L H V V W G +AS D+ I + + GS + +
Sbjct: 6 LSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCK--------------S 51
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS--TGICTAVLRGHSSLVKGVAWD 176
+ L GH V ++WS LAS S D T IW T A L GH + VK W
Sbjct: 52 VLLDGHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWS 111
Query: 177 PIGSFIASQSDDKTVIIWRTSD 198
P G F+A+ S DKTV IW +
Sbjct: 112 PSGRFLATCSRDKTVWIWEVGE 133
Score = 139 (54.0 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 52/188 (27%), Positives = 79/188 (42%)
Query: 49 FENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGE 108
+ + T ATL H V W+ GR++A+ S D+ + I E GE
Sbjct: 85 WRRQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWIWEV-----------GE 133
Query: 109 PPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIW--NMSTGICTAVLRGH 166
E ++ A H+ DV + W PD LAS S DNTI + + C L H
Sbjct: 134 D---EEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKH 190
Query: 167 SSLVKGVAWDPIGS-FIASQSDDKTVIIWRTS----DWSLAHRTDGHWAKSLGSTFFRRL 221
+S V G+++ P +AS + D +V +W T W L + H ++ R
Sbjct: 191 ASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTR 250
Query: 222 GW--SPCG 227
G+ + CG
Sbjct: 251 GFLATACG 258
Score = 129 (50.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 107 GEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICT-----A 161
G D +W++ TL H V D++W LA+ DN + ++ G C+
Sbjct: 220 GTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGDCSWRLGCT 279
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWR 195
+ + HS V V+W P G +AS DD V +W+
Sbjct: 280 LTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLWQ 313
Score = 78 (32.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVN 70
HE +++++ P A+ GGD +R+W ++ G ++ + +L L H +V
Sbjct: 12 HED-RVWNVAWNPSGTILASCGGDKSIRLWGLE--GGSWV----CKSVL--LDGHQRTVR 62
Query: 71 CVRWAKHGRYIASGSDDQVILIHEKK 96
V W+ GRY+AS S D I ++
Sbjct: 63 GVSWSNCGRYLASSSFDGTTCIWRRQ 88
Score = 48 (22.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 337 TQSVVDLSWSPDGYSLFACSLDGTV 361
+Q V +SWSP G L + DG V
Sbjct: 285 SQDVNSVSWSPSGGLLASAGDDGYV 309
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 134 (52.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 45/161 (27%), Positives = 74/161 (45%)
Query: 91 LIHEKKPGSGTTEFGSGEPPDI--EN-WKVAMTLRGHTADVVDLNWSPD-DSILASGSLD 146
+I K P + F + P + +N + + L+GHT + L+W+P+ + ++ S S D
Sbjct: 135 IIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDD 194
Query: 147 NTIHIWNMS-----TGICTA--VLRGHSSLVKGVAWDPI--GSFIASQSDDKTVIIWRTS 197
T+ W+++ G A + +GH S+V+ VAW + G F S DDK ++IW
Sbjct: 195 QTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVF-GSVGDDKKLLIWDLR 253
Query: 198 DWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
H D H A+ L ++P FI T K
Sbjct: 254 TNVPGHAIDAHSAE------VNCLAFNPYSEFILATGSADK 288
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 55/203 (27%), Positives = 85/203 (41%)
Query: 53 ESTQRLLATLRDHFGSVNCVRWA--KHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPP 110
++T L L+ H + W K G I S SDDQ + + +G +GE
Sbjct: 159 DNTFNPLLKLKGHTKEGYGLSWNPNKEG-LILSASDDQTVCHWDINGNAGA----NGE-- 211
Query: 111 DIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHIWNMSTGICTAVLRGHSSL 169
K +GH + V D+ W D + S D + IW++ T + + HS+
Sbjct: 212 ----LKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAE 267
Query: 170 VKGVAWDPIGSFI-ASQSDDKTVIIWRTSDWSLA-HRTDGHWAKSLGSTFFRRLGWSPCG 227
V +A++P FI A+ S DKTV +W + L H + H F+ + WSP
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESH-----RDEIFQ-VQWSPHN 321
Query: 228 HFITTTHGFQKPRHSAPVLERGE 250
I + G K H + + GE
Sbjct: 322 ETILASSGTDKRLHVWDLSKIGE 344
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + ES H + V+W+ H I +SG+D
Sbjct: 282 ATGSADKTVALWDLRNLRLKLHSFES----------HRDEIFQVQWSPHNETILASSGTD 331
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G T E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 332 KRLHVWDLSKIGEDQTAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVVCSVS 386
Query: 145 LDNTIHIWNMSTGI 158
DN + +W M+ I
Sbjct: 387 EDNILQVWQMADNI 400
Score = 77 (32.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 305 PYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVA 362
PY+ ++A GS D+T+ +W + R + + + WSP ++ A S GT
Sbjct: 275 PYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASS--GTDK 332
Query: 363 NFH-FEVKELGH--RLSDAE 379
H +++ ++G DAE
Sbjct: 333 RLHVWDLSKIGEDQTAEDAE 352
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLF 330
HS F + +V+ +P T S K +++ IG +D+T P LF
Sbjct: 303 HS-FESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG-EDQTAEDAEDGPPELLF 360
Query: 331 V-AKHFFTQSVVDLSWSPD 348
+ H T + D SW+P+
Sbjct: 361 IHGGH--TAKISDFSWNPN 377
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 161 (61.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 62/212 (29%), Positives = 88/212 (41%)
Query: 12 EGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDES------------TQR 57
EG Q + S+DV P A+ D +R+W+++S GK ++ +
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLES-GKQIRAIDAGPVDAWSVAFSPDSQ 119
Query: 58 LLATLRDHFGSVNC--VRWAKHGRYIASGSDDQVILIHEKKPG----SGTTEFGSGEPPD 111
LAT H G VN V K Y ++ I G SG + G D
Sbjct: 120 HLAT-GSHVGKVNIFGVETGKK-EYSLDTRGKFILSIAYSPDGKYLASGAID-GIINIFD 176
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
I K+ TL GH + L +SPD +L + S D I I+ + A L GH S V
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVL 236
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSDWSLAH 203
VA+ P + S S DK+V +W S + H
Sbjct: 237 NVAFSPDDTHFVSSSSDKSVKVWDVSARTCVH 268
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 112 IENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVK 171
+E K +L ++ + +SPD LASG++D I+I++++TG L GH+ ++
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 194
Query: 172 GVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCG-HFI 230
+ + P + + SDD + I+ SLA GH GS + + +SP HF+
Sbjct: 195 SLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH-----GS-WVLNVAFSPDDTHFV 248
Query: 231 TTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNS-ASSQEV 284
+++ S V + FL H + VK+N + + S A QE+
Sbjct: 249 SSSSD-----KSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEI 298
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
++++ +A TL GH + V+++ +SPDD+ S S D ++ +W++S C H V
Sbjct: 218 EVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQV 277
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
GV ++ GS I S +DD+ + ++
Sbjct: 278 WGVKYNKNGSKIVSVADDQEIHVY 301
Score = 120 (47.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 65/260 (25%), Positives = 109/260 (41%)
Query: 35 HKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDD-QVILIH 93
H+ IW++ GKN ND S + +L D V +W+ + S + Q+ ++
Sbjct: 15 HEDAIWSV-GWGKN-SNDGSELVISGSLDD---LVKVWKWSDERLELQSTLEGHQLGVVS 69
Query: 94 EKKPGSGTTEFGSGEPPDIENWKV--AMTLRGHTADVVD---LNWSPDDSILASGSLDNT 148
SG S I W + +R A VD + +SPD LA+GS
Sbjct: 70 VDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGK 129
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH 208
++I+ + TG L + +A+ P G ++AS + D + I+ + L H +GH
Sbjct: 130 VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 209 WAKSLGSTFFRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLGHNAPIIV 266
A + R L +SP + T G+ K ++ AAT GH + ++
Sbjct: 190 -AMPI-----RSLTFSPDSQLLVTASDDGYIKIYE----VQHASLAATLS--GHGSWVLN 237
Query: 267 VKFN-HSMFRRNSASSQEVK 285
V F+ +S+S + VK
Sbjct: 238 VAFSPDDTHFVSSSSDKSVK 257
Score = 43 (20.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/61 (19%), Positives = 30/61 (49%)
Query: 340 VVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLA 399
V+++++SPD + S D +V + + H D + D++ +Y ++ ++A
Sbjct: 235 VLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQ-DQVWGVKYNKNGSKIVSVA 293
Query: 400 E 400
+
Sbjct: 294 D 294
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 56/191 (29%), Positives = 90/191 (47%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SGE PD+
Sbjct: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP---SGECNPDLR------ 172
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST----G-ICTA--VLRGHSSLVK 171
LRGH + L+W+P+ S L S S D+TI +W++S G + A + GH+++V+
Sbjct: 173 -LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
V+W + S S +DD+ ++IW R+++ S +H D H A+ L ++P
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE------VNCLSFNPYS 285
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 286 EFILATGSADK 296
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH + +W++ +V K E + + T H V V W H S +DDQ ++I
Sbjct: 199 DHTICLWDISAVPK--EGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S T K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 255 WDTR--SNNTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
Score = 76 (31.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHN 329
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 330 ETILASS--GTDRRLNVWDLSKIGEEQSPEDAE 360
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH--TAKISDFSWNP 384
Query: 348 D 348
+
Sbjct: 385 N 385
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 161 (61.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 46/146 (31%), Positives = 67/146 (45%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWA--KHGRYIASGSDDQVILIHEKKPGSGTTEF 104
K FE + T +L+ TL+ H G V CV WA K G +AS S D +LI ++ S T
Sbjct: 38 KIFEIEGDTHKLVETLKGHEGPVWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPI 97
Query: 105 GSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS--ILASGSLDNTIHIWNMSTGICT-A 161
GSG W HTA V ++W+P ++ +LA S D + + T
Sbjct: 98 GSGA------WTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVLEFRDNSWTHQ 151
Query: 162 VLRGHSSLVKGVAWDPI---GSFIAS 184
+ H V ++W P GS ++S
Sbjct: 152 IFHAHGMGVNSISWAPAASPGSLVSS 177
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 110 PDIENWKVAMTLRGHTADVVDLNWSPD---DSILASGSLDNTIHIWNMST---GICTAVL 163
P+ + + TL GH+ V D+ WSP S +AS S D T+ +W G T+ +
Sbjct: 203 PETKTYNATQTLEGHSDWVRDVAWSPSILSKSYIASASQDKTVRVWTADASNPGQWTSQV 262
Query: 164 RGHSSLVKGVAWDPIGSFIASQSDDKTVIIWR 195
+++ V+W P G+ +A D V +W+
Sbjct: 263 LEFDNVLWRVSWSPSGNILAVSGGDNKVSLWK 294
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 164 (62.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 53/166 (31%), Positives = 78/166 (46%)
Query: 33 GDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
GDH V K++ K +E +T + T H V VR + G +AS S+DQ + +
Sbjct: 204 GDHIVSASRDKTM-KMWE--VATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRV 260
Query: 93 HEKKPGSGTTEFGSGEPP-DIENW---KVAMTLRGHTADVVDLNWSPDDSILASGSLDNT 148
E E + +W T+ T + P +L SGS D T
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLL-SGSRDKT 319
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
I +W++STG+C L GH + V+GV + P G F+ S +DDKT+ IW
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Score = 146 (56.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 35/103 (33%), Positives = 47/103 (45%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D E TL+GHT V D+++ +LAS S D TI +W+ C + GH V
Sbjct: 136 DYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 195
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAK 211
VA P G I S S DKT+ +W + GH W +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVR 238
Score = 133 (51.9 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D + ++ T+ GH +V + P+ + S S D T+ +W ++TG C GH V
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWV 237
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+ V + G+ +AS S+D+TV +W
Sbjct: 238 RMVRPNQDGTLLASCSNDQTVRVW 261
Score = 130 (50.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
L GH + V + + P S++ S S D TI +W+ G L+GH+ V+ +++D G
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGH 208
+AS S D T+ +W + GH
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGH 191
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 48/182 (26%), Positives = 77/182 (42%)
Query: 22 QPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI 81
Q G L A+ D VR+W + +T+ A LR+H V C+ WA +
Sbjct: 244 QDGTL-LASCSNDQTVRVWVV-----------ATKECKAELREHEHVVECISWAPESAHP 291
Query: 82 ----ASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA-----MTLRGHTADVVDLN 132
A+GS+++ KPG GS + I+ W ++ MTL GH V +
Sbjct: 292 TISEATGSENK----KSGKPGPFLLS-GSRDKT-IKMWDISTGMCLMTLVGHDNWVRGVL 345
Query: 133 WSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVI 192
+ P + S + D T+ IW+ C L H V + + ++ + S D+TV
Sbjct: 346 FHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVK 405
Query: 193 IW 194
+W
Sbjct: 406 VW 407
Score = 56 (24.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 292 TNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLF--VAKHFFTQSVVDLSWSPDG 349
+ T K +P + GS+D+TI +W ++ L V + + V+ + P G
Sbjct: 294 SEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVL---FHPGG 350
Query: 350 YSLFACSLDGTVANFHFEVKELGHRLSDAE 379
+ +C+ D T+ + ++ K LS E
Sbjct: 351 RFVVSCADDKTLRIWDYKNKRCMKTLSAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHF--FTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
I S+D+T+ +W A+ + K F + V + + DG L +CS D TV +
Sbjct: 207 IVSASRDKTMKMWEVATG---YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVV 263
Query: 367 EVKELGHRLSDAE 379
KE L + E
Sbjct: 264 ATKECKAELREHE 276
Score = 46 (21.3 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
TL+ H SV + + + G+ +AS S D I
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTI 174
Score = 44 (20.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 302 ESQPYNVIAIGSQDRTITVW 321
++ PY + GS D+T+ VW
Sbjct: 390 KASPY--VVTGSVDQTVKVW 407
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 157 (60.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 52/166 (31%), Positives = 76/166 (45%)
Query: 33 GDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
GDH V K++ K +E T + T H V VR + G IAS S+DQ + +
Sbjct: 139 GDHIVSASRDKTI-KMWE--VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 195
Query: 93 HEKKPGSGTTEFGSGEPP-DIENWKVAMT---LRGHTADVVDLNWSPDDSILASGSLDNT 148
E E + +W + + T + P +L SGS D T
Sbjct: 196 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKT 254
Query: 149 IHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
I +W++STG+C L GH + V+GV + G FI S +DDKT+ +W
Sbjct: 255 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Score = 149 (57.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 35/103 (33%), Positives = 46/103 (44%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D E TL+GHT V D+++ +LAS S D TI +W+ C + GH V
Sbjct: 71 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV 130
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGH--WAK 211
VA P G I S S DKT+ +W GH W +
Sbjct: 131 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 173
Score = 141 (54.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 94 EKKPGSGTTEFGSGEP----PDIENW----KVAMTLRGHTADVVDLNWSPDDSILASGSL 145
E K EF SG P D + W L GH + V + + P S++ S S
Sbjct: 4 ESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASE 63
Query: 146 DNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRT 205
D TI +W+ TG L+GH+ V+ +++D G +AS S D T+ +W +
Sbjct: 64 DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 123
Query: 206 DGH 208
GH
Sbjct: 124 HGH 126
Score = 137 (53.3 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D + ++ T+ GH +V + P+ + S S D TI +W + TG C GH V
Sbjct: 113 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 172
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+ V + G+ IAS S+D+TV +W
Sbjct: 173 RMVRPNQDGTLIASCSNDQTVRVW 196
Score = 128 (50.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 45/179 (25%), Positives = 69/179 (38%)
Query: 22 QPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI 81
Q G L A+ D VR+W + +T+ A LR+H V C+ WA Y
Sbjct: 179 QDGTL-IASCSNDQTVRVWVV-----------ATKECKAELREHEHVVECISWAPESSY- 225
Query: 82 ASGSDDQVILIHEKKPGS-GTTEFGSGEPPDIENWKVA-----MTLRGHTADVVDLNWSP 135
S + KK G G I+ W V+ MTL GH V + +
Sbjct: 226 --SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 283
Query: 136 DDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIW 194
+ S + D T+ +W+ C L H V + + ++ + S D+TV +W
Sbjct: 284 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 57 (25.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPR-PLFVAKHFFTQSVVD-LSWSPDG-YS 351
+ +Q +IA S D+T+ VW A+ + +H + VV+ +SW+P+ YS
Sbjct: 176 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVECISWAPESSYS 226
Score = 47 (21.6 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 301 KESQPYNVIAIGSQDRTITVWTTASPRPLF--VAKHFFTQSVVDLSWSPDGYSLFACSLD 358
K +P + GS+D+TI +W ++ L V + + V+ + G + +C+ D
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL---FHSGGKFILSCADD 294
Query: 359 GTVANFHFEVK 369
T+ + ++ K
Sbjct: 295 KTLRVWDYKNK 305
Score = 47 (21.6 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHF--FTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
I S+D+TI +W + + K F + V + + DG + +CS D TV +
Sbjct: 142 IVSASRDKTIKMWEVQTG---YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 198
Query: 367 EVKELGHRLSDAE 379
KE L + E
Sbjct: 199 ATKECKAELREHE 211
Score = 46 (21.3 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVI 90
D T TL+ H SV + + G+ +AS S D I
Sbjct: 71 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTI 109
Score = 43 (20.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 302 ESQPYNVIAIGSQDRTITVW 321
++ PY + GS D+T+ VW
Sbjct: 325 KTAPY--VVTGSVDQTVKVW 342
>TAIR|locus:2100267 [details] [associations]
symbol:AT3G01340 "AT3G01340" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC010676
HOGENOM:HOG000216895 KO:K14004 ProtClustDB:CLSN2683847
EMBL:AF370262 EMBL:AY063079 IPI:IPI00528696 RefSeq:NP_001030616.1
RefSeq:NP_186783.1 UniGene:At.18565 ProteinModelPortal:Q9SRI1
SMR:Q9SRI1 IntAct:Q9SRI1 STRING:Q9SRI1 PRIDE:Q9SRI1 ProMEX:Q9SRI1
DNASU:821216 EnsemblPlants:AT3G01340.1 EnsemblPlants:AT3G01340.2
GeneID:821216 KEGG:ath:AT3G01340 TAIR:At3g01340 InParanoid:Q9SRI1
OMA:KIDQAHP PhylomeDB:Q9SRI1 ArrayExpress:Q9SRI1
Genevestigator:Q9SRI1 Uniprot:Q9SRI1
Length = 302
Score = 163 (62.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 61/205 (29%), Positives = 92/205 (44%)
Query: 47 KNFENDESTQRLLATLRDHFGSVNCVRWAKH--GRYIASGSDDQVILIHEKKPGSG--TT 102
K ++ TQ + T DH SVN + WA H G +A G+ D I + + G TT
Sbjct: 86 KEGNQNQWTQAHVFT--DHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADGGWDTT 143
Query: 103 EFGSGEPPDIEN--WKVAMTLRGH--TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGI 158
+ P + + W A T G ++ ++D + LASG D+T+ +W S G
Sbjct: 144 KIDQAHPVGVTSVSWAPA-TEPGALVSSGMIDPVYK-----LASGGCDSTVKVWKFSNGS 197
Query: 159 ----CTAVLRGHSSLVKGVAWDP-IG---SFIASQSDDKTVIIWRTSDWSLAHRTDGHWA 210
C L H+ V+ VAW P +G S IAS S+D VIIW + +G
Sbjct: 198 WKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIG--KEGEQWEGTVL 255
Query: 211 KSLGSTFFRRLGWSPCGHFITTTHG 235
K + +R + WS G+ + + G
Sbjct: 256 KDFKTPVWR-VSWSLTGNLLAVSDG 279
Score = 38 (18.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 307 NVIAIGSQDRTITVW 321
N++A+ + +TVW
Sbjct: 272 NLLAVSDGNNNVTVW 286
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 164 (62.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 63/249 (25%), Positives = 100/249 (40%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST-GICTAVLRGHSS 168
D+ K+ + L HT V DL ++PD S IL S S D T+ +W++ G VLRGH +
Sbjct: 156 DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQN 215
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF---------- 218
V A+ P S + S K V +W +++ + +GH + F
Sbjct: 216 WVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATAS 275
Query: 219 ---RRLGWSPCGHFITTTHGFQKPRHSAPVLERG---EWAATFDFLGHNAPIIVVKFNHS 272
R W P I G P + P+ G W + F H+ + +
Sbjct: 276 YDTRVYIWDPHNGDILMEFGHLFPPPT-PIFAGGANDRWVRSVSF-SHDGLHVASLADDK 333
Query: 273 MFRR-NSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV 331
M R V+ AP+ +NG + +V+A G+ D ++ W T PR +
Sbjct: 334 MVRFWRIDEDYPVQVAPL--SNGLCCAFSTDG---SVLAAGTHDGSVYFWAT--PRQVPS 386
Query: 332 AKHFFTQSV 340
+H S+
Sbjct: 387 LQHLCRMSI 395
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 164 (62.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 63/249 (25%), Positives = 100/249 (40%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST-GICTAVLRGHSS 168
D+ K+ + L HT V DL ++PD S IL S S D T+ +W++ G VLRGH +
Sbjct: 156 DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQN 215
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF---------- 218
V A+ P S + S K V +W +++ + +GH + F
Sbjct: 216 WVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATAS 275
Query: 219 ---RRLGWSPCGHFITTTHGFQKPRHSAPVLERG---EWAATFDFLGHNAPIIVVKFNHS 272
R W P I G P + P+ G W + F H+ + +
Sbjct: 276 YDTRVYIWDPHNGDILMEFGHLFPPPT-PIFAGGANDRWVRSVSF-SHDGLHVASLADDK 333
Query: 273 MFRR-NSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV 331
M R V+ AP+ +NG + +V+A G+ D ++ W T PR +
Sbjct: 334 MVRFWRIDEDYPVQVAPL--SNGLCCAFSTDG---SVLAAGTHDGSVYFWAT--PRQVPS 386
Query: 332 AKHFFTQSV 340
+H S+
Sbjct: 387 LQHLCRMSI 395
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 167 (63.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 53 ESTQRLLAT----LRDHFGSVN---CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFG 105
+ST RLLAT R + SVN CV + G + + I E+ +G+ + G
Sbjct: 30 KSTGRLLATGGDDCRVNVWSVNKPNCVM-SLTGH--TTPIESLQISAKEELIVAGS-QSG 85
Query: 106 SGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRG 165
S D+E K+ TL GH A++ L++ P S +ASGSLD I +W++ C +
Sbjct: 86 SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS 145
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHW 209
H+ V+ + + P G ++AS +DD TV +W + + GH+
Sbjct: 146 HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 189
Score = 151 (58.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 39/156 (25%), Positives = 70/156 (44%)
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
M+L GHT + L S + ++ +GS +I +W++ L GH + + + + P
Sbjct: 57 MSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY 116
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
GSF+AS S D + +W + H + R L +SP G ++ +
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSH------TQAVRCLRFSPDGKWLASA----A 166
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMF 274
H+ + + F+F GH P+ VV+F+ S +
Sbjct: 167 DDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEY 202
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 167 (63.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 53 ESTQRLLAT----LRDHFGSVN---CVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFG 105
+ST RLLAT R + SVN CV + G + + I E+ +G+ + G
Sbjct: 30 KSTGRLLATGGDDCRVNVWSVNKPNCVM-SLTGH--TTPIESLQISAKEELIVAGS-QSG 85
Query: 106 SGEPPDIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRG 165
S D+E K+ TL GH A++ L++ P S +ASGSLD I +W++ C +
Sbjct: 86 SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS 145
Query: 166 HSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHW 209
H+ V+ + + P G ++AS +DD TV +W + + GH+
Sbjct: 146 HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 189
Score = 151 (58.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 119 MTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPI 178
M+L GHT + L S + ++ +GS +I +W++ L GH + + + + P
Sbjct: 57 MSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY 116
Query: 179 GSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQK 238
GSF+AS S D + +W + H + R L +SP G ++ +
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSH------TQAVRCLRFSPDGKWLASA----A 166
Query: 239 PRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSM 273
H+ + + F+F GH P+ VV+F+ S+
Sbjct: 167 DDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSI 201
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 167 (63.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 121 LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS 180
+ GH +DV + W P+ + +A+GS D T+ +W++ TG C + GH S+V +A P G
Sbjct: 498 MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGR 557
Query: 181 FIASQSDDKTVIIWRTS 197
++AS +D T+++W S
Sbjct: 558 YMASGDEDGTIMMWDLS 574
Score = 151 (58.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 32/84 (38%), Positives = 47/84 (55%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D++ + GH + V+ L SPD +ASG D TI +W++ST C L GH+S V
Sbjct: 530 DVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 589
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+++ GS +AS S D TV +W
Sbjct: 590 WSLSYSGEGSLLASGSADCTVKLW 613
Score = 139 (54.0 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 61/233 (26%), Positives = 86/233 (36%)
Query: 11 HEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGK------NFENDESTQRLLATLRD 64
H G+ SI G+L A G D +++W+M +G+ END S Q +
Sbjct: 352 HNGLNCSSIS-HDGSL-VAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSI------ 403
Query: 65 HFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTL--- 121
N + + G V PG S I W +
Sbjct: 404 ---GPN----GRRSYTLLLGHSGPVYSATFSPPGDFV--LSSSADTTIRLWSTKLNANLV 454
Query: 122 --RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
+GH V D +SP AS S D T IW+M ++ GH S V V W P
Sbjct: 455 CYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNC 514
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
++IA+ S DKTV +W GH + L L SP G ++ +
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS------LAMSPDGRYMAS 561
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 135 (52.6 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 55/191 (28%), Positives = 87/191 (45%)
Query: 64 DHFGSVNCVRWAKHGRYIASG---SDDQVILIHEKKPGSGTTEFGSGE-PPDIENWKVAM 119
+H G VN R+ I + S D ++ + K P SG+ PD+
Sbjct: 121 NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDP---SGDCSPDLR------ 171
Query: 120 TLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMSTGI-------CTAVLRGHSSLVK 171
LRGH + L+W+ + S L S S D+T+ +W++S G A+ GHS++V+
Sbjct: 172 -LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVE 230
Query: 172 GVAWDPIG-SFIASQSDDKTVIIW--RTSDWSL-AHRTDGHWAKSLGSTFFRRLGWSPCG 227
VAW + S S +DD+ ++IW R++ S +H D H A+ L ++P
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAE------VNCLSFNPYS 284
Query: 228 HFITTTHGFQK 238
FI T K
Sbjct: 285 EFILATGSADK 295
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 34 DHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRW-AKHGRYIASGSDDQVILI 92
DH V +W++ S G E + + T H V V W H S +DDQ ++I
Sbjct: 198 DHTVCLWDI-SAGPK-EGKVVDAKAIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 93 HEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSP-DDSILASGSLDNTIHI 151
+ + S TT K + ++ HTA+V L+++P + ILA+GS D T+ +
Sbjct: 254 WDTR--SNTTS------------KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 152 WNM-STGICTAVLRGHSSLVKGVAWDPIG-SFIASQSDDKTVIIWRTS 197
W++ + + H + V W P + +AS D+ + +W S
Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 29 ATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAKHGRYI--ASGSD 86
ATG D V +W+++++ + ES H + V W+ H I +SG+D
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHSFES----------HKDEIFQVHWSPHNETILASSGTD 338
Query: 87 DQVILIHEKKPGSG-TTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGS 144
++ + K G + E PP++ GHTA + D +W+P++ ++ S S
Sbjct: 339 RRLNVWDLSKIGEEQSAEDAEDGPPEL-----LFIHGGHTAKISDFSWNPNEPWVICSVS 393
Query: 145 LDNTIHIWNMSTGI 158
DN + IW M+ I
Sbjct: 394 EDNIMQIWQMAENI 407
Score = 75 (31.5 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 295 TSKIGGKESQPYN--VIAIGSQDRTITVWTTASPRPLFVAKHFFTQ---SVVDLSWSPDG 349
T+++ PY+ ++A GS D+T+ +W R L + H F + + WSP
Sbjct: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVHWSPHN 328
Query: 350 YSLFACSLDGTVANFH-FEVKELGHRLS--DAE 379
++ A S GT + +++ ++G S DAE
Sbjct: 329 ETILASS--GTDRRLNVWDLSKIGEEQSAEDAE 359
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 305 PYN--VIAIGSQDRTITVWTTAS--------------PRPLFV-AKHFFTQSVVDLSWSP 347
P+N ++A DR + VW + P LF+ H T + D SW+P
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH--TAKISDFSWNP 383
Query: 348 D 348
+
Sbjct: 384 N 384
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 164 (62.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 46/122 (37%), Positives = 61/122 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
DIEN K+ M L+GH D+ L++ P L SGS D T+ IW++ TG C+ L V
Sbjct: 471 DIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-V 529
Query: 171 KGVAWDP-IGSFIASQSDDKTVIIWRTSDWSLAHRTD-------GHWAKSLGSTFFRRLG 222
VA P G +IA+ S D+ V +W + L R D GH S+ S F R G
Sbjct: 530 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH-KDSVYSVVFTRDG 588
Query: 223 WS 224
S
Sbjct: 589 QS 590
Score = 51 (23.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQ--SVVDLSWSPDG--YSLFA 354
I GS+DR + W S PL + + SV + SP G Y++FA
Sbjct: 645 ILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFA 694
Score = 42 (19.8 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 306 YNVIAIGSQDRTITVW 321
YNV A GS D +W
Sbjct: 690 YNVFATGSGDCKARIW 705
>MGI|MGI:1859866 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0040020 "regulation of meiosis" evidence=IGI]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050773
"regulation of dendrite development" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISO] [GO:0090129
"positive regulation of synapse maturation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1859866 GO:GO:0005813 GO:GO:0048471
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0050773 GO:GO:0000922
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0040020
GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OMA:RTPGKSN OrthoDB:EOG4CC414 EMBL:AB045313
EMBL:AF312208 EMBL:AK075998 EMBL:AK076030 EMBL:AK083459
EMBL:AK168650 EMBL:BC003215 IPI:IPI00320406 RefSeq:NP_075712.2
UniGene:Mm.289747 ProteinModelPortal:Q9JJ66 SMR:Q9JJ66
IntAct:Q9JJ66 MINT:MINT-2834618 STRING:Q9JJ66 PhosphoSite:Q9JJ66
PRIDE:Q9JJ66 DNASU:107995 Ensembl:ENSMUST00000006565 GeneID:107995
KEGG:mmu:107995 GeneTree:ENSGT00580000081599 InParanoid:Q9JJ66
NextBio:359849 Bgee:Q9JJ66 CleanEx:MM_CDC20 Genevestigator:Q9JJ66
GermOnline:ENSMUSG00000006398 Uniprot:Q9JJ66
Length = 499
Score = 167 (63.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 49/163 (30%), Positives = 72/163 (44%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ATL H V +RWA GR++ASG +D ++ + PG SG W
Sbjct: 302 VATLSGHSQEVCGLRWAPDGRHLASGGNDNIVNVWPSGPGE------SG-------WAPL 348
Query: 119 MTLRGHTADVVDLNWSP-DDSILASG--SLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T H V + W P +ILA+G + D I IWN+ +G C + + HS V + W
Sbjct: 349 QTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQ-VCSILW 407
Query: 176 DP-IGSFIASQS-DDKTVIIWRTSDWSLAHRTDGHWAKSLGST 216
P I+ ++IW+ + GH A+ LG T
Sbjct: 408 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLGLT 450
Score = 135 (52.6 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 44/153 (28%), Positives = 66/153 (43%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICT-AVLRG---HSSLVKGVAW 175
TL GH+ +V L W+PD LASG DN +++W G A L+ H VK VAW
Sbjct: 304 TLSGHSQEVCGLRWAPDGRHLASGGNDNIVNVWPSGPGESGWAPLQTFTQHQGAVKAVAW 363
Query: 176 DPIGSFIASQ---SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
P S I + + D+ + IW + D H + S WSP + +
Sbjct: 364 CPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVH--SQVCSIL-----WSPHYKELIS 416
Query: 233 THGFQKPRHSAPVLERGEWAATFDFLGHNAPII 265
HGF + + + + A + GH A ++
Sbjct: 417 GHGFAQ--NQLVIWKYPTMAKVAELKGHTARVL 447
Score = 122 (48.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 37/132 (28%), Positives = 56/132 (42%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGIC-TAVLRGHSSL 169
D++ K + H+A V L+W+ IL+SGS IH ++ A L GHS
Sbjct: 254 DVQQQKRLRNMTSHSARVSSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 311
Query: 170 VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHF 229
V G+ W P G +AS +D V +W + + + G+ + + W P
Sbjct: 312 VCGLRWAPDGRHLASGGNDNIVNVWPSGPGESGWAPLQTFTQHQGAV--KAVAWCPWQSN 369
Query: 230 ITTTHGFQKPRH 241
I T G RH
Sbjct: 370 ILATGGGTSDRH 381
Score = 111 (44.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 126 ADVVDLNWSPDDSILASGS--LDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIA 183
+ V + WSP L SG N + IW T A L+GH++ V G+ P G+ +A
Sbjct: 400 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLGLTMSPDGATVA 459
Query: 184 SQSDDKTVIIWRTSDWSLAHRTD 206
S + D+T+ +WR + A R +
Sbjct: 460 SAAADETLRLWRCFEMDPALRRE 482
Score = 57 (25.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 19/63 (30%), Positives = 25/63 (39%)
Query: 23 PGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWAK-HGRYI 81
P A+GG D+ V +W G ES L T H G+V V W +
Sbjct: 319 PDGRHLASGGNDNIVNVWPS---GPG----ESGWAPLQTFTQHQGAVKAVAWCPWQSNIL 371
Query: 82 ASG 84
A+G
Sbjct: 372 ATG 374
Score = 46 (21.3 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 69 VNCVRWAKHGRYIASGSDD 87
++ V W K G Y+A G+ +
Sbjct: 229 ISSVAWIKEGNYLAVGTSN 247
Score = 43 (20.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 337 TQSVVDLSWSPDGYSLFACSLDGTV 361
T V+ L+ SPDG ++ + + D T+
Sbjct: 443 TARVLGLTMSPDGATVASAAADETL 467
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/249 (25%), Positives = 100/249 (40%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST-GICTAVLRGHSS 168
D+ K+ + L HT V DL ++PD S IL S S D T+ +W++ G VLRGH +
Sbjct: 156 DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQN 215
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFF---------- 218
V A+ P S + S K V +W +++ + +GH + F
Sbjct: 216 WVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATAS 275
Query: 219 ---RRLGWSPCGHFITTTHGFQKPRHSAPVLERG---EWAATFDFLGHNAPIIVVKFNHS 272
R W P I G P + P+ G W + F H+ + +
Sbjct: 276 YDTRVYIWDPHTGAILMEFGHLFPPPT-PIFAGGANDRWVRSVSF-SHDGLHVASLADDK 333
Query: 273 MFRR-NSASSQEVKAAPVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV 331
M R V+ AP+ +NG + +V+A G+ D ++ W T PR +
Sbjct: 334 MVRFWRIDEDYPVQVAPL--SNGLCCAFSTDG---SVLAAGTHDGSVYFWAT--PRQVPS 386
Query: 332 AKHFFTQSV 340
+H S+
Sbjct: 387 LQHLCRMSI 395
>UNIPROTKB|Q5H7C0 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9823 "Sus scrofa" [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0090129 "positive regulation
of synapse maturation" evidence=ISS] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0005815
GO:GO:0005680 GO:GO:0000922 GO:GO:0031145 GO:GO:0090129
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OMA:RTPGKSN
OrthoDB:EOG4CC414 GeneTree:ENSGT00580000081599 EMBL:AB192873
RefSeq:NP_001116566.1 UniGene:Ssc.17001 ProteinModelPortal:Q5H7C0
STRING:Q5H7C0 Ensembl:ENSSSCT00000004368 GeneID:397379
KEGG:ssc:397379 Uniprot:Q5H7C0
Length = 499
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/163 (28%), Positives = 70/163 (42%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ATL H V +RWA GR++ASG +D ++ + PG G W
Sbjct: 302 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG-------------GWVPL 348
Query: 119 MTLRGHTADVVDLNWSP-DDSILASG--SLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T H V + W P ++LA+G + D I IWN+ +G C + + HS V + W
Sbjct: 349 QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-VCSILW 407
Query: 176 DP-IGSFIASQS-DDKTVIIWRTSDWSLAHRTDGHWAKSLGST 216
P I+ ++IW+ + GH A+ L T
Sbjct: 408 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLT 450
Score = 142 (55.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG----ICTAVLRGHSSLVKGVAW 175
TL GH+ +V L W+PD LASG DN +++W + G + H VK VAW
Sbjct: 304 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 363
Query: 176 DPIGSFIASQ---SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
P S + + + D+ + IW + D H + S WSP + +
Sbjct: 364 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSIL-----WSPHYKELIS 416
Query: 233 THGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
HGF + + + + A + GH A ++ + + SA++ E
Sbjct: 417 GHGFAQ--NQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADE 465
Score = 46 (21.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 69 VNCVRWAKHGRYIASGS 85
V+ V W K G Y+A G+
Sbjct: 229 VSSVAWIKEGNYLAVGT 245
>UNIPROTKB|F1MRW5 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005680 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 EMBL:DAAA02009047 IPI:IPI00715664
UniGene:Bt.639 ProteinModelPortal:F1MRW5 Ensembl:ENSBTAT00000012945
Uniprot:F1MRW5
Length = 499
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/163 (28%), Positives = 70/163 (42%)
Query: 59 LATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVA 118
+ATL H V +RWA GR++ASG +D ++ + PG G W
Sbjct: 302 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG-------------GWVPL 348
Query: 119 MTLRGHTADVVDLNWSP-DDSILASG--SLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
T H V + W P ++LA+G + D I IWN+ +G C + + HS V + W
Sbjct: 349 QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-VCSILW 407
Query: 176 DP-IGSFIASQS-DDKTVIIWRTSDWSLAHRTDGHWAKSLGST 216
P I+ ++IW+ + GH A+ L T
Sbjct: 408 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLT 450
Score = 142 (55.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTG----ICTAVLRGHSSLVKGVAW 175
TL GH+ +V L W+PD LASG DN +++W + G + H VK VAW
Sbjct: 304 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 363
Query: 176 DPIGSFIASQ---SDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
P S + + + D+ + IW + D H + S WSP + +
Sbjct: 364 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSIL-----WSPHYKELIS 416
Query: 233 THGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
HGF + + + + A + GH A ++ + + SA++ E
Sbjct: 417 GHGFAQ--NQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADE 465
Score = 45 (20.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 69 VNCVRWAKHGRYIASGS 85
++ V W K G Y+A G+
Sbjct: 229 ISSVAWIKEGNYLAVGT 245
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 158 (60.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 47/142 (33%), Positives = 67/142 (47%)
Query: 54 STQRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIE 113
S Q L L H G + C ++ G+YIASGS D+ IL+ +G D E
Sbjct: 48 SLQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWR----------ANG---DCE 94
Query: 114 NWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGV 173
N+ + L GH ++DL WS D I+ S S D + W+++TG GH ++ +
Sbjct: 95 NYGI---LSGHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSL 151
Query: 174 AWDPIGSFIA-SQSDDKTVIIW 194
G I S SDD T+ IW
Sbjct: 152 DISKRGEEILFSGSDDGTIGIW 173
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 42/150 (28%), Positives = 61/150 (40%)
Query: 76 KHGR-YIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKV-----AMTLRGHTADVV 129
KH YI S + I E +G + G DI+ W V + GH +
Sbjct: 178 KHAADYIESDFPVTAVAISE----AGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTIT 233
Query: 130 DLNWSPDDSILASGSLDNTIHIWNMSTGICT---------AVLRGHSSLVKGVAWDPIGS 180
L SPD L S ++D+T W++ T A + +LV+G WD G
Sbjct: 234 TLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRG-GWDKEGK 292
Query: 181 FIASQSDDKTVIIWRTSDWSLAHRTDGHWA 210
+A + D TV+IW L ++ GH A
Sbjct: 293 RVAMGAADGTVVIWSNETGKLTYKLPGHKA 322
Score = 46 (21.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 287 APVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWT 322
AP+G + GG + + V A+G+ D T+ +W+
Sbjct: 274 APMGIEKNLVR-GGWDKEGKRV-AMGAADGTVVIWS 307
Score = 40 (19.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 338 QSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRL 375
+++V W +G + + DGTV + E +L ++L
Sbjct: 280 KNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKL 317
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 72/255 (28%), Positives = 113/255 (44%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMS---TGICTA-VLR-----GHSS 168
AM LRGH ++V W+P +LASGS D+T IWN+S TG T VLR G
Sbjct: 158 AMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQD 217
Query: 169 L-----VKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGW 223
+ V + W+ G+ +A+ S D IW T D +LA H K G F L W
Sbjct: 218 VPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQH--K--GPIF--ALKW 270
Query: 224 SPCGHFITTTHGFQKPRHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQE 283
+ G+FI + G K GE F F H+AP + V + + + ++
Sbjct: 271 NKKGNFILSA-GVDKTTIIWDA-HTGEAKQQFPF--HSAPALDVDWQSNNTFASCSTDMC 326
Query: 284 VKAAPVG-------WTNGTSKIGGKESQPY-NVIAIGSQDRTITVWTTASPRPLF-VAKH 334
+ +G + T+++ + P N++A S D T+ +W+ + + H
Sbjct: 327 IHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAH 386
Query: 335 FFTQSVVDLSWSPDG 349
++ + + WSP G
Sbjct: 387 --SKEIYTIKWSPTG 399
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 56 QRLLATLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENW 115
+R + T + H VN ++W G +AS SDD + + K + + +I
Sbjct: 335 ERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDL-QAHSKEIYTI 393
Query: 116 KVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAW 175
K + T G +L + S S D+T+ +W+ G C L H V VA+
Sbjct: 394 KWSPTGPGTNNPNANL------MLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAF 447
Query: 176 DPIGSFIASQSDDKTVIIWRTSDWSLAHRTDG 207
P G +AS S DK V IW T +L + G
Sbjct: 448 SPDGRHLASGSFDKCVHIWNTQSGALVNSYRG 479
Score = 144 (55.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 51 NDESTQRLLAT-LRDHFGSVNCVRWAKHGRYIASGSDDQ--VILIHEKKPGSGTTEFGSG 107
N E T LLAT D F + W K G ++ + + + K G+ G
Sbjct: 230 NSEGT--LLATGSYDGFARI----WTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD 283
Query: 108 EPP---DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLR 164
+ D + H+A +D++W +++ AS S D IH+ + +
Sbjct: 284 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQERPIKTFQ 342
Query: 165 GHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWS 224
GH++ V + WDP G+ +AS SDD T+ +W + H H +K + + + WS
Sbjct: 343 GHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAH-SKEIYT-----IKWS 396
Query: 225 PCG 227
P G
Sbjct: 397 PTG 399
Score = 138 (53.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 76/316 (24%), Positives = 118/316 (37%)
Query: 62 LRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGS--GTTEFGSGEPPDIENWKVAM 119
LR H V W +ASGS D I S G+T+ V
Sbjct: 161 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPS 220
Query: 120 TLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIG 179
DV L+W+ + ++LA+GS D IW G + L H + + W+ G
Sbjct: 221 N-----KDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 274
Query: 180 SFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSL-----GSTFFRRLGWSPCGHFITTTH 234
+FI S DKT IIW + H A +L + F C H
Sbjct: 275 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKL-- 332
Query: 235 GFQKP-----RHSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPV 289
G ++P H+ V +W T + L + + +K SM + + + +
Sbjct: 333 GQERPIKTFQGHTNEV-NAIKWDPTGNLLASCSDDMTLKL-WSMKQDTCVHDLQAHSKEI 390
Query: 290 GWTNGTSKIGGKESQPY-NVIAIGSQ--DRTITVWTTASPRPLF-VAKHFFTQSVVDLSW 345
+T S G + P N++ S D T+ +W + + KH + V +++
Sbjct: 391 -YTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKH--QEPVYSVAF 447
Query: 346 SPDGYSLFACSLDGTV 361
SPDG L + S D V
Sbjct: 448 SPDGRHLASGSFDKCV 463
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 73/281 (25%), Positives = 107/281 (38%)
Query: 162 VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTD---GHWAKSLGSTF- 217
VLRGH S V AW+P+ +AS S D T IW S+ S T H + G
Sbjct: 160 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVP 219
Query: 218 ----FRRLGWSPCGHFITTTH--GFQKPRHSAPVLERGEWAATFDFLG-HNAPIIVVKFN 270
L W+ G + T GF + + G A+T LG H PI +K+N
Sbjct: 220 SNKDVTSLDWNSEGTLLATGSYDGFARIW-----TKDGNLAST---LGQHKGPIFALKWN 271
Query: 271 HSMFRRNSASSQEVKAAPVGWTNGTSKIGGKESQPY-------------NVIAIGSQDRT 317
+ N S V + W T + K+ P+ N A S D
Sbjct: 272 K---KGNFILSAGVDKTTIIWDAHTGE--AKQQFPFHSAPALDVDWQSNNTFASCSTDMC 326
Query: 318 ITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKELGHRLSD 377
I V RP+ + T V + W P G L +CS D T+ + + H L
Sbjct: 327 IHVCKLGQERPIKTFQGH-TNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQ- 384
Query: 378 AELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTK 418
A E+ ++ G N A L+L +++ ++T +
Sbjct: 385 AHSKEIYTIKWSPT-GPGTN--NPNANLMLARSASFDSTVR 422
Score = 107 (42.7 bits), Expect = 0.00040, Sum P(2) = 0.00039
Identities = 47/206 (22%), Positives = 77/206 (37%)
Query: 3 AEKPSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATL 62
A K +R ++F P + A+G GD RIWN+ STQ +L
Sbjct: 155 ASKAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTG----GSTQLVLR-- 208
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLR 122
+C+R + G+ + S D + + + T + ++ +A TL
Sbjct: 209 -------HCIR--EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLG 259
Query: 123 GHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFI 182
H + L W+ + + S +D T IW+ TG HS+ V W +F
Sbjct: 260 QHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF- 318
Query: 183 ASQSDDKTVIIWRTSDWSLAHRTDGH 208
AS S D + + + GH
Sbjct: 319 ASCSTDMCIHVCKLGQERPIKTFQGH 344
Score = 62 (26.9 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTV 361
+A GS D+ + +W T S V + T + ++ W+ G + A + DG+V
Sbjct: 454 LASGSFDKCVHIWNTQSGA--LVNSYRGTGGIFEVCWNSTGDKVGASASDGSV 504
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 68/270 (25%), Positives = 114/270 (42%)
Query: 26 LRFATGGGDHKVRIW------NMKSVGKNFENDE----STQRL----LATLRDHFGSVNC 71
+ AT D ++W N + N +N+E +T + + +L H VN
Sbjct: 333 VNIATTSADSTCKLWPLLNNDNNNNNNNNNDNEEEDNDATVSIETQPILSLEGHSDVVNR 392
Query: 72 VRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDL 131
+ GRYI + S+D+ + + + G K + GH+ V+ +
Sbjct: 393 CSFHPCGRYITTSSNDKSWRLWDLESGG----------------KCLLDQEGHSDGVMGI 436
Query: 132 NWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTV 191
+ D S+LA+GS D + IW++ +G +GHS V V W P G +AS S+D TV
Sbjct: 437 SIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTV 496
Query: 192 IIW--RTSDWS---LAHRTDGH---WAKSLGSTFFRRLGWSP-CGHFITTTHGFQKPRHS 242
+IW R + S LAH + + K T SP C +++ T K +
Sbjct: 497 VIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTW 556
Query: 243 APVLERGEWAATFDFLGHNAPIIVVKFNHS 272
+P W+ F GH++ + + +S
Sbjct: 557 SP----NTWSPLATFEGHSSKVTSIDLTNS 582
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 51/181 (28%), Positives = 75/181 (41%)
Query: 16 IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLATLRDHFGSVNCVRWA 75
+ I +Q ATG D VRIW+++S G R + + H V V W+
Sbjct: 433 VMGISIQSDGSLLATGSQDGLVRIWDLRS-G----------RPILYFQGHSKQVISVDWS 481
Query: 76 KHGRYIASGSDDQVILIHE-KKPGSGTTEFGSGEPPDIENWKVAMTLRGHTADVVDLNWS 134
+G +AS S+D ++I + +K ++ T + + N S
Sbjct: 482 PNGYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNN----NSS 537
Query: 135 PDD-SILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVII 193
P + LA+ S D I W+ +T A GHSS V + D S I S S DKT I
Sbjct: 538 PGCVNYLATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSI--DLTNSKILSTSFDKTWKI 595
Query: 194 W 194
W
Sbjct: 596 W 596
Score = 112 (44.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 307 NVIAIGSQDRTITVWTTASPRP-LFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFH 365
+++A GSQD + +W S RP L+ H ++ V+ + WSP+GY L + S D TV +
Sbjct: 443 SLLATGSQDGLVRIWDLRSGRPILYFQGH--SKQVISVDWSPNGYQLASSSEDNTVVIWD 500
Query: 366 FEVKE 370
KE
Sbjct: 501 IRKKE 505
Score = 74 (31.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 133 WSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF----------I 182
+SPD +A GS +W++S G +L GHS V +A+ P+ I
Sbjct: 277 FSPDGKNVAIGSWSGVSKVWSVS-GQKKQILAGHSQRVSCIAYHPLSGIDGNHTKNLVNI 335
Query: 183 ASQSDDKTVIIW 194
A+ S D T +W
Sbjct: 336 ATTSADSTCKLW 347
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 138 (53.6 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 38/115 (33%), Positives = 55/115 (47%)
Query: 118 AMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDP 177
A GH V +N+SP +LASGS D T+ IW + + V R H++ V+ V +
Sbjct: 54 AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS 113
Query: 178 IGSFIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITT 232
G + SDDKTV +W T HR ++ S + R +SP G I +
Sbjct: 114 DGQSFVTASDDKTVKVWST------HRQKFLFSLSQHINWVRCAKFSPDGRLIVS 162
Score = 121 (47.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 122 RGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSF 181
+GH V +++S + LASGS+D+ + +W+M GH V V + P G
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 182 IASQSDDKTVIIW 194
+AS S DKTV IW
Sbjct: 76 LASGSRDKTVRIW 88
Score = 121 (47.7 bits), Expect = 0.00042, P = 0.00042
Identities = 45/215 (20%), Positives = 86/215 (40%)
Query: 19 IDVQPGALRFATGGGDHKVRIW--NMKSVGKNFENDESTQRLLATLRDHFGSVNC----- 71
++ P A+G D VRIW N+K F +T R + D V
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 72 VR-WAKHGRYIASGSDDQVILIH-EKKPGSGTTEFGSGEPPDIENW-KVAM----TLRGH 124
V+ W+ H + + + K G + + ++ W K + + H
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 125 TADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGSFIAS 184
V +++ P + +A+ +DNT+ +W++ T + HS+ V +++ P G+++ +
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 246
Query: 185 QSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFR 219
S D T+ I + L + GH + F R
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSR 281
Score = 108 (43.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
D+ ++ + H+A V L++ P + L + S D+T+ I ++ G L GH
Sbjct: 215 DVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 171 KGVAWDPIGSFIASQSDDKTVIIWRTS 197
VA+ G + AS D+ V++W+++
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 78 (32.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 4 EKPSWVRH-EGMQ--IFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA 60
E PS RH +G + + S+D + A+G D + +W+MK + +
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYR---------- 56
Query: 61 TLRDHFGSVNCVRWAKHGRYIASGSDDQVILI 92
H +V CV ++ G +ASGS D+ + I
Sbjct: 57 -FAGHKDAVTCVNFSPSGHLLASGSRDKTVRI 87
Score = 65 (27.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 313 SQDRTITVWTTASPRPLF-VAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHFEVKEL 371
S D+T+ VW+T + LF +++H V +SPDG + + S D TV + +E
Sbjct: 122 SDDKTVKVWSTHRQKFLFSLSQHI--NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 372 GH 373
H
Sbjct: 180 VH 181
Score = 59 (25.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQS--VVDLSWSPDGYSLFACSLDGTV 361
IA D T+ VW + R L +H+ S V LS+ P G L S D T+
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNALSFHPSGNYLVTASSDSTL 253
Score = 50 (22.7 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 63 RDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEF 104
+ H +V V ++ + + +ASGS D +++ KP + F
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRF 57
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 64/243 (26%), Positives = 103/243 (42%)
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDS-ILASGSLDNTIHIWNMST-GICTAVLRGHSS 168
D+ K+ + L HT V DL ++PD S +L S S D T+ +W++ G VLRGH +
Sbjct: 157 DVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQN 216
Query: 169 LVKGVAWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTDGHW-----------AKSLGSTF 217
V A+ P S + S K V +W ++L + +GH L +
Sbjct: 217 WVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHNDVVCCEFSPDGALLATAS 276
Query: 218 F--RRLGWSPCGHFITTTHGFQKPRHSAPVLERG---EWAATFDFLGHNAPIIVVKFNHS 272
+ R + W P + G P S P+ G W + F H+ I +
Sbjct: 277 YDTRVIVWDPHTATVLLELGHLFPPPS-PIFAGGANDRWVRSVAFC-HDGRHIASVTDDR 334
Query: 273 MFRRNSASSQEVKA-APVGWTNGTSKIGGKESQPYNVIAIGSQDRTITVWTTASPRPLFV 331
+ R S + +A P+ TNG + +V++ GS+D ++ W ASPR +
Sbjct: 335 LVRFWSIDEKSPQAIGPL--TNGLCCAFSTDG---SVLSAGSRDGSVHFW--ASPRSIAS 387
Query: 332 AKH 334
+H
Sbjct: 388 LQH 390
Score = 116 (45.9 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 39/144 (27%), Positives = 61/144 (42%)
Query: 52 DESTQRLLATLRDHFGSVNCVRWAKHGRYI-ASGSDDQVILIHEKKPGSGTTEFGSGEPP 110
D T +LL L DH V + +A G + S S D+ + + + K
Sbjct: 157 DVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLK-------------- 202
Query: 111 DIENWKVAMTLRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLV 170
++ + LRGH V +SPD S+L S + +W+M L GH + V
Sbjct: 203 --DDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHNDV 260
Query: 171 KGVAWDPIGSFIASQSDDKTVIIW 194
+ P G+ +A+ S D VI+W
Sbjct: 261 VCCEFSPDGALLATASYDTRVIVW 284
Score = 47 (21.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 309 IAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGTVANFHF 366
IA + DR + W+ P + T + ++S DG L A S DG+V HF
Sbjct: 327 IASVTDDRLVRFWSIDEKSPQAIGP--LTNGLC-CAFSTDGSVLSAGSRDGSV---HF 378
WARNING: HSPs involving 679 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 689 689 0.00080 121 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 929
No. of states in DFA: 631 (67 KB)
Total size of DFA: 389 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.76u 0.15s 63.91t Elapsed: 00:00:03
Total cpu time: 63.85u 0.15s 64.00t Elapsed: 00:00:03
Start: Fri May 10 01:06:06 2013 End: Fri May 10 01:06:09 2013
WARNINGS ISSUED: 2