BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040067
SLLVSSNSVPFHSSRTLLTQLQGLRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERW
LLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD
SLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEE
SEEKGDSPPLSSAKS

High Scoring Gene Products

Symbol, full name Information P value
AT2G21530 protein from Arabidopsis thaliana 1.3e-38
MT3428
Regulator protein
protein from Mycobacterium tuberculosis 0.00012

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040067
        (195 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2050034 - symbol:AT2G21530 "AT2G21530" species...   413  1.3e-38   1
UNIPROTKB|O53145 - symbol:MT3428 "Regulator protein" spec...   114  0.00012   1


>TAIR|locus:2050034 [details] [associations]
            symbol:AT2G21530 "AT2G21530" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
            membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0000023 "maltose metabolic process" evidence=RCA]
            [GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
            "rRNA processing" evidence=RCA] [GO:0009657 "plastid organization"
            evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
            evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
            [GO:0019252 "starch biosynthetic process" evidence=RCA] [GO:0043085
            "positive regulation of catalytic activity" evidence=RCA]
            InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
            SMART:SM00240 GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0009535 EMBL:BT024599
            EMBL:AK118718 IPI:IPI00525288 RefSeq:NP_179748.2 UniGene:At.19824
            UniGene:At.46763 ProteinModelPortal:Q8GWP4 SMR:Q8GWP4 STRING:Q8GWP4
            PaxDb:Q8GWP4 PRIDE:Q8GWP4 ProMEX:Q8GWP4 EnsemblPlants:AT2G21530.1
            GeneID:816692 KEGG:ath:AT2G21530 TAIR:At2g21530 eggNOG:NOG280860
            HOGENOM:HOG000148315 InParanoid:Q8GWP4 OMA:MEITISQ PhylomeDB:Q8GWP4
            ProtClustDB:CLSN2918055 Genevestigator:Q8GWP4 Uniprot:Q8GWP4
        Length = 209

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 88/160 (55%), Positives = 112/160 (70%)

Query:    20 QLQGLRIKAKKHRNLG-AIRASEADXXXXXXXXXXDVAAERWLLQPVGDGDTSHIGFKVP 78
             Q+  +   AKK R+    +R + A               ERWLL+PVGDGDT HIG+KV 
Sbjct:    49 QISNISFIAKKPRSHAPVVRTTRASLDENQSPTS---GGERWLLKPVGDGDTRHIGYKVA 105

Query:    79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
             MP  FEI+S +VT+GRLPE+AD+VIPVATVSG+HA I     +LLVTD++STNGTFI++K
Sbjct:   106 MPAPFEISSGQVTIGRLPEKADVVIPVATVSGVHATINTNEKNLLVTDMNSTNGTFIEDK 165

Query:   139 RLRSGVVAVASPGSRITFGDTHLAMFRVSKI-DTVEAPSK 177
             RL  GV A A PG+RITFGDT+LA+FRV K+ D+ E+  K
Sbjct:   166 RLIPGVAAPAFPGTRITFGDTNLAIFRVFKLQDSEESIEK 205


>UNIPROTKB|O53145 [details] [associations]
            symbol:MT3428 "Regulator protein" species:1773
            "Mycobacterium tuberculosis" [GO:0006469 "negative regulation of
            protein kinase activity" evidence=IDA] InterPro:IPR000253
            InterPro:IPR001867 InterPro:IPR008984 InterPro:IPR011990
            InterPro:IPR016032 Pfam:PF00486 Pfam:PF00498 PROSITE:PS50006
            SMART:SM00240 SMART:SM00862 GO:GO:0006355 EMBL:AE000516
            GenomeReviews:AE000516_GR GO:GO:0035556 GO:GO:0006469 GO:GO:0003677
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005622 Gene3D:1.25.40.10
            GO:GO:0000156 SUPFAM:SSF46894 HOGENOM:HOG000233295
            ProtClustDB:CLSK791063 InterPro:IPR005158 Pfam:PF03704
            SMART:SM01043 HSSP:P30749 EMBL:Y16569 RefSeq:NP_337957.1 SMR:O53145
            PhosSite:P0805315 EnsemblBacteria:EBMYCT00000069474 GeneID:926351
            KEGG:mtc:MT3428 PATRIC:18129290 Uniprot:O53145
        Length = 381

 Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
 Identities = 31/81 (38%), Positives = 42/81 (51%)

Query:    92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
             +GRLP R       DMV+P   VS  HA I   G+S ++TDL S NG ++  +R+ +   
Sbjct:   297 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGESFMITDLRSVNGVYVRGRRIAT--T 354

Query:   146 AVASPGSRITFGDTHLAMFRV 166
             A  + G  I  GD H   F V
Sbjct:   355 ATLNDGDHIRIGD-HELTFEV 374


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.129   0.356    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      195       185   0.00080  110 3  11 23  0.49    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  543 (58 KB)
  Total size of DFA:  126 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.61u 0.11s 16.72t   Elapsed:  00:00:00
  Total cpu time:  16.61u 0.11s 16.72t   Elapsed:  00:00:00
  Start:  Fri May 10 01:27:57 2013   End:  Fri May 10 01:27:57 2013

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