BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040067
(195 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118489264|gb|ABK96437.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 220
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/183 (70%), Positives = 147/183 (80%), Gaps = 8/183 (4%)
Query: 3 LVSSNSVPFHSSRTLLTQLQGLRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLL 62
L++ NS+ F S + TQLQG+RIKAKK R+LGA+ AS ADS T TDV ERWLL
Sbjct: 31 LLAHNSITFQSPKNFFTQLQGVRIKAKKQRSLGAVHASGADS------TLTDVE-ERWLL 83
Query: 63 QPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSL 122
PVGDGD+ HIGFKV MPDAFEIAS+EVTVGRLP++ADMVIPVATVS LHARIQ KG +L
Sbjct: 84 VPVGDGDSGHIGFKVKMPDAFEIASSEVTVGRLPDKADMVIPVATVSALHARIQNKGGNL 143
Query: 123 LVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVE-APSKTEES 181
+VTDLDSTNGTFID+KRL G SPGSRITFGDTHLAMF VSK+ VE APSK+EES
Sbjct: 144 VVTDLDSTNGTFIDKKRLPPGASVSVSPGSRITFGDTHLAMFLVSKLAKVESAPSKSEES 203
Query: 182 EEK 184
++K
Sbjct: 204 QDK 206
>gi|224104933|ref|XP_002313623.1| predicted protein [Populus trichocarpa]
gi|222850031|gb|EEE87578.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/189 (69%), Positives = 149/189 (78%), Gaps = 10/189 (5%)
Query: 3 LVSSNSVPFHSSRTLLTQLQGLRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLL 62
L++ NS+ F S + TQLQG+RIKAKK R+LGA+ AS ADS T TDV ERWLL
Sbjct: 31 LLAHNSITFQSPKNFFTQLQGVRIKAKKQRSLGAVHASGADS------TLTDVE-ERWLL 83
Query: 63 QPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSL 122
PVGDGD+ HIGFKV MPDAFEIAS+EVTVGRLP++ADMVIPVATVS LHARIQ KG +L
Sbjct: 84 VPVGDGDSGHIGFKVKMPDAFEIASSEVTVGRLPDKADMVIPVATVSALHARIQNKGGNL 143
Query: 123 LVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVE-APSKTEES 181
+VTDLDSTNGTFID+KRL G SPGSRI FGDTHLAMF VSK+ VE APSK+EES
Sbjct: 144 VVTDLDSTNGTFIDKKRLPPGASVSVSPGSRIIFGDTHLAMFLVSKLAKVESAPSKSEES 203
Query: 182 EEKG--DSP 188
++K DSP
Sbjct: 204 QDKVEIDSP 212
>gi|255571479|ref|XP_002526687.1| conserved hypothetical protein [Ricinus communis]
gi|223533987|gb|EEF35709.1| conserved hypothetical protein [Ricinus communis]
Length = 219
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 148/186 (79%), Gaps = 8/186 (4%)
Query: 3 LVSSNSVPFHSSR-TLLTQLQGLRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWL 61
L++ N +PFHSS+ TLL Q G RIK +KHR+LG I ASE ++ T DV ++W+
Sbjct: 32 LLAHNLIPFHSSKVTLLPQQHGFRIKTRKHRSLGPIHASEGEN------TVRDVQ-DKWI 84
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS 121
L+PVGDGD+ HIG++V MPDAFEIAS EVTVGRLPE+ADMVIPVATVSG+HAR+QKKG++
Sbjct: 85 LEPVGDGDSRHIGYQVKMPDAFEIASNEVTVGRLPEKADMVIPVATVSGVHARLQKKGEN 144
Query: 122 LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEES 181
LLVTDLDSTNGTFI+EKRL GVVA AS GS ITFGD HLAMFR SKI++ P ++EE
Sbjct: 145 LLVTDLDSTNGTFINEKRLSPGVVAAASSGSFITFGDIHLAMFRASKIESASKPEESEER 204
Query: 182 EEKGDS 187
EE G S
Sbjct: 205 EETGSS 210
>gi|363807914|ref|NP_001242194.1| uncharacterized protein LOC100808269 [Glycine max]
gi|255640338|gb|ACU20457.1| unknown [Glycine max]
Length = 222
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 141/185 (76%), Gaps = 9/185 (4%)
Query: 4 VSSNSVPFHSSRTLLTQLQGLRIKAKKHRNL-GAIRASEADSSTTTTTTSTDVAAERWLL 62
V+ +SVP+H L L R KA + +NL G +RASEA TT T+ D AERWLL
Sbjct: 36 VAFSSVPYHHHHLLKCFL--FRSKANEKQNLVGVLRASEA----ATTPTTND--AERWLL 87
Query: 63 QPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSL 122
+PVGDGDT HIGFKV MP +EIAS+EVTVGR+P++AD+VIPVATVSG+HARIQKK +L
Sbjct: 88 EPVGDGDTRHIGFKVEMPGLYEIASSEVTVGRVPDKADLVIPVATVSGVHARIQKKQGNL 147
Query: 123 LVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
LVTDLDSTNGTFI++KRLR GVVA SPGS ITFGDTHLAMFRVSK++ V+ E+E
Sbjct: 148 LVTDLDSTNGTFINDKRLRPGVVATISPGSCITFGDTHLAMFRVSKVEDVKPADTVGETE 207
Query: 183 EKGDS 187
+ D+
Sbjct: 208 IELDT 212
>gi|296083965|emb|CBI24353.3| unnamed protein product [Vitis vinifera]
Length = 1195
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 137/188 (72%), Gaps = 14/188 (7%)
Query: 3 LVSSNSVPFHSSRTLLTQLQGLRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLL 62
L+ S+S+ F ++L TQL GLRIKA++ R + + AS T+ AERWLL
Sbjct: 1017 LLPSHSLSFIYCKSLSTQLYGLRIKARQRRKVSPVFAS------------TENNAERWLL 1064
Query: 63 QPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSL 122
+P+GDGDT HIGFKV P A+EIAS+ VTVGRLP++AD+VIPVATVSGLHARIQKK L
Sbjct: 1065 EPIGDGDTRHIGFKVARPGAYEIASSVVTVGRLPDKADLVIPVATVSGLHARIQKKEGGL 1124
Query: 123 LVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
LVTDLDSTNGTFID+K+L GV A SPGS ITFGD HLA+FRVSK++ E ++E+S
Sbjct: 1125 LVTDLDSTNGTFIDDKKLSPGVAAPVSPGSCITFGDIHLAIFRVSKLENAEVTKESEDSP 1184
Query: 183 EK--GDSP 188
K DSP
Sbjct: 1185 VKPEADSP 1192
>gi|225436005|ref|XP_002273249.1| PREDICTED: zeaxanthin epoxidase, chloroplastic [Vitis vinifera]
Length = 208
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 137/188 (72%), Gaps = 14/188 (7%)
Query: 3 LVSSNSVPFHSSRTLLTQLQGLRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLL 62
L+ S+S+ F ++L TQL GLRIKA++ R + + AS T+ AERWLL
Sbjct: 30 LLPSHSLSFIYCKSLSTQLYGLRIKARQRRKVSPVFAS------------TENNAERWLL 77
Query: 63 QPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSL 122
+P+GDGDT HIGFKV P A+EIAS+ VTVGRLP++AD+VIPVATVSGLHARIQKK L
Sbjct: 78 EPIGDGDTRHIGFKVARPGAYEIASSVVTVGRLPDKADLVIPVATVSGLHARIQKKEGGL 137
Query: 123 LVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
LVTDLDSTNGTFID+K+L GV A SPGS ITFGD HLA+FRVSK++ E ++E+S
Sbjct: 138 LVTDLDSTNGTFIDDKKLSPGVAAPVSPGSCITFGDIHLAIFRVSKLENAEVTKESEDSP 197
Query: 183 EK--GDSP 188
K DSP
Sbjct: 198 VKPEADSP 205
>gi|357443911|ref|XP_003592233.1| Zeaxanthin epoxidase [Medicago truncatula]
gi|355481281|gb|AES62484.1| Zeaxanthin epoxidase [Medicago truncatula]
Length = 227
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 133/191 (69%), Gaps = 14/191 (7%)
Query: 4 VSSNSVPFHSSRTLLTQLQG--LRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWL 61
V+ NS H + L Q G + KA++ NLGAI AS+A + TTT +RW+
Sbjct: 37 VTFNSATHHLHKCFLFQQPGGVIHPKAQEKVNLGAIHASKATTPTTT-------TTQRWI 89
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS 121
L+PVGDGD+ HIGFKV P A+EI S EVTVGR+PE+AD+VIPVATVSG+HARI+ K D+
Sbjct: 90 LEPVGDGDSRHIGFKVERPGAYEITSNEVTVGRVPEKADLVIPVATVSGVHARIRIKQDN 149
Query: 122 LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI-----DTVEAPS 176
LLV DLDSTNGTFI +KRL+ GVV S GS ITFGDT+LAMFRVSKI DTV P
Sbjct: 150 LLVIDLDSTNGTFIGDKRLKPGVVTTVSSGSYITFGDTNLAMFRVSKIEEKAADTVGEPE 209
Query: 177 KTEESEEKGDS 187
E++ K DS
Sbjct: 210 GELENDGKSDS 220
>gi|357462097|ref|XP_003601330.1| Zeaxanthin epoxidase [Medicago truncatula]
gi|355490378|gb|AES71581.1| Zeaxanthin epoxidase [Medicago truncatula]
gi|388521581|gb|AFK48852.1| unknown [Medicago truncatula]
Length = 228
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 131/188 (69%), Gaps = 14/188 (7%)
Query: 4 VSSNSVPFHSSRTLLTQLQG--LRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWL 61
V+ NS H + L Q G + KA++ NLGAI AS+A + TTT +RW+
Sbjct: 37 VTFNSATHHLHKCFLFQQPGGVIHPKAQEKVNLGAIHASKATTPTTT-------TTQRWI 89
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS 121
L+PVGDGD+ HIGFKV P A+EI S EVTVGR+PE+AD+VIPVATVSG+HARI+ K D+
Sbjct: 90 LEPVGDGDSRHIGFKVERPGAYEITSNEVTVGRVPEKADLVIPVATVSGVHARIRIKQDN 149
Query: 122 LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI-----DTVEAPS 176
LLV DLDSTNGTFI +KRL+ GVV S GS ITFGDT+LAMFRVSKI DTV P
Sbjct: 150 LLVIDLDSTNGTFIGDKRLKPGVVTTVSSGSYITFGDTNLAMFRVSKIEEKAADTVGEPE 209
Query: 177 KTEESEEK 184
E++ K
Sbjct: 210 GELENDGK 217
>gi|449463863|ref|XP_004149650.1| PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cucumis
sativus]
gi|449514907|ref|XP_004164512.1| PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cucumis
sativus]
Length = 183
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/129 (68%), Positives = 103/129 (79%)
Query: 56 AAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI 115
A+ RWLL PVGDG+ HIG KV MPDAFEI S EVTVGRLP++AD+VIPVATVS HARI
Sbjct: 47 ASSRWLLVPVGDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVATVSAQHARI 106
Query: 116 QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAP 175
+ + D LLV DLDSTNGTFI++KRL GVVA S G+ ITFGD HLAMF+V+K+ TVEA
Sbjct: 107 KNQEDRLLVIDLDSTNGTFINDKRLNPGVVAAVSSGNSITFGDIHLAMFQVAKLKTVEAA 166
Query: 176 SKTEESEEK 184
SK +E E+
Sbjct: 167 SKIQEETEE 175
>gi|297821347|ref|XP_002878556.1| forkhead-associated domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324395|gb|EFH54815.1| forkhead-associated domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 204
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 116/168 (69%), Gaps = 10/168 (5%)
Query: 18 LTQLQGLRIKAKKHRNLG-AIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFK 76
+ Q+ + AKK R+ +R + A S + T ERWLLQPVGDGDT HIG+K
Sbjct: 42 IDQISYISFTAKKQRSHAPVVRKTRASSDENQSPTP---GGERWLLQPVGDGDTRHIGYK 98
Query: 77 VPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
V MP FEI S +VT+GRLPE+AD+VIPVATVSG+HA I ++LLVTD++STNGTFI+
Sbjct: 99 VAMPAPFEITSGQVTIGRLPEKADVVIPVATVSGVHATINTNENNLLVTDMNSTNGTFIE 158
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
+KRL GV A A PG+RITFGDT+LA+FRV K+ EES EK
Sbjct: 159 DKRLIPGVAAPAFPGTRITFGDTNLAIFRVFKLQ------DREESTEK 200
>gi|330318604|gb|AEC10968.1| hypothetical protein [Camellia sinensis]
Length = 223
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 113/154 (73%), Gaps = 9/154 (5%)
Query: 6 SNSVPFHS-SRTLLTQLQGLRIKAKKHRNLGA-IRASEADSSTTTTTTSTDVAAERWLLQ 63
S SVPF ++ + T+L R+K ++ RNL I AS A+ TT+TD +ERWLL+
Sbjct: 48 SISVPFLGFNKNIPTKLPCTRLKTRQQRNLVVPISASGAE------TTATD-DSERWLLE 100
Query: 64 PVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL 123
PVGDGD+ H+G+KV MP AFEI S VT+GR PE+ADMVIPVATVSGLHARIQKK SL
Sbjct: 101 PVGDGDSRHLGYKVSMPSAFEITSKIVTIGRAPEKADMVIPVATVSGLHARIQKKDGSLF 160
Query: 124 VTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
VTDLDSTNGTFI EKRLR GV A A GS ITFG
Sbjct: 161 VTDLDSTNGTFIGEKRLRPGVAATAPFGSYITFG 194
>gi|30681437|ref|NP_179748.2| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
gi|26452454|dbj|BAC43312.1| unknown protein [Arabidopsis thaliana]
gi|88193816|gb|ABD42997.1| At2g21530 [Arabidopsis thaliana]
gi|330252097|gb|AEC07191.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
Length = 209
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 116/166 (69%), Gaps = 10/166 (6%)
Query: 20 QLQGLRIKAKKHRNLG-AIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVP 78
Q+ + AKK R+ +R + A + TS ERWLL+PVGDGDT HIG+KV
Sbjct: 49 QISNISFIAKKPRSHAPVVRTTRASLDENQSPTS---GGERWLLKPVGDGDTRHIGYKVA 105
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
MP FEI+S +VT+GRLPE+AD+VIPVATVSG+HA I +LLVTD++STNGTFI++K
Sbjct: 106 MPAPFEISSGQVTIGRLPEKADVVIPVATVSGVHATINTNEKNLLVTDMNSTNGTFIEDK 165
Query: 139 RLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
RL GV A A PG+RITFGDT+LA+FRV K+ +EES EK
Sbjct: 166 RLIPGVAAPAFPGTRITFGDTNLAIFRVFKLQ------DSEESIEK 205
>gi|223949229|gb|ACN28698.1| unknown [Zea mays]
gi|414882091|tpg|DAA59222.1| TPA: FHA domain containing protein [Zea mays]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 113/160 (70%), Gaps = 5/160 (3%)
Query: 28 AKKHRNLGAIRASEADSSTTTTTTSTDVAA--ERWLLQPVGDGDTSHIGFKVPMPDAFEI 85
A + R L + R S SS+ T ST V++ ERW+L P GDGD HIG+KV P A EI
Sbjct: 41 AARTRPLDSKRGSWRRSSSATGGRSTAVSSSSERWVLDPAGDGDWRHIGYKVARPGAIEI 100
Query: 86 AS--TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
S T VTVGR+ ++AD+V+PVATVSG HAR++KKG SLLVTDLDSTNGT+I+E+RL G
Sbjct: 101 VSEDTAVTVGRVADKADIVLPVATVSGAHARLEKKGGSLLVTDLDSTNGTYINERRLNPG 160
Query: 144 VVAVASPGSRITFGDTHLAMFRVSKIDTVEAPS-KTEESE 182
A PGS + FGD HLAMFRV K VEAPS TEE+E
Sbjct: 161 FPASVDPGSLLIFGDIHLAMFRVRKTVVVEAPSTSTEEAE 200
>gi|226508540|ref|NP_001150384.1| FHA domain containing protein [Zea mays]
gi|195638808|gb|ACG38872.1| FHA domain containing protein [Zea mays]
Length = 213
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 113/162 (69%), Gaps = 7/162 (4%)
Query: 28 AKKHRNLGAIRASEADSSTTTTTTSTDVAA----ERWLLQPVGDGDTSHIGFKVPMPDAF 83
A + R L + R S SS+ T ST V++ ERW+L P GDGD HIG+KV P A
Sbjct: 40 AARTRPLDSKRGSWRRSSSATGGRSTAVSSSSSSERWVLDPAGDGDWRHIGYKVARPGAI 99
Query: 84 EIAS--TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
EI S T VTVGR+ ++AD+V+PVATVSG HAR++KKG SLLVTDLDSTNGT+I+E+RL
Sbjct: 100 EIVSEDTAVTVGRVADKADIVLPVATVSGAHARLEKKGGSLLVTDLDSTNGTYINERRLN 159
Query: 142 SGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPS-KTEESE 182
G A PGS + FGD HLAMFRV K VEAPS TEE+E
Sbjct: 160 PGFPASVDPGSLLIFGDIHLAMFRVRKTVVVEAPSTSTEEAE 201
>gi|326518688|dbj|BAJ92505.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523039|dbj|BAJ88560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
Query: 44 SSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVI 103
SS +T + S V+ ERW+L+P GDGD HIG++V P A EIAS +TVGR+PE AD+VI
Sbjct: 67 SSASTGSPSAVVSTERWILEPAGDGDWKHIGYRVARPGAIEIASGAMTVGRVPENADVVI 126
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
PVATVSG+HAR++KK SL+VTD+DSTNGT+++E++L G PGS + FGD HLAM
Sbjct: 127 PVATVSGVHARLEKKDGSLVVTDMDSTNGTYVNERKLVPGFPVAVQPGSLLIFGDIHLAM 186
Query: 164 FRVSK--IDTVEAPSKTEESE 182
FRV K +D SK ++ E
Sbjct: 187 FRVRKTIVDVAAEASKDDQQE 207
>gi|168006787|ref|XP_001756090.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692600|gb|EDQ78956.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 103/144 (71%), Gaps = 9/144 (6%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
RW+L P GDG+TSH+G VP+P FE+AS VTVGR+ ++AD+VIPVATVSG+HAR++KK
Sbjct: 122 RWVLDPCGDGNTSHLGAPVPLPSGFELASDNVTVGRVKDKADVVIPVATVSGVHARLEKK 181
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDT---VEAP 175
L VTDLDSTNGT+I+ +R+R G V PGS ITFGD HLA+FR +++ EAP
Sbjct: 182 SGVLYVTDLDSTNGTYINNRRIRPGAVTPVPPGSYITFGDEHLAVFRYLQLEEDSPAEAP 241
Query: 176 SK--TEESEEKGDSP----PLSSA 193
++ +E SE + P PL +A
Sbjct: 242 AEVPSEPSEASAEEPLEAQPLEAA 265
>gi|115483939|ref|NP_001065631.1| Os11g0127800 [Oryza sativa Japonica Group]
gi|77548487|gb|ABA91284.1| FHA domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113644335|dbj|BAF27476.1| Os11g0127800 [Oryza sativa Japonica Group]
gi|125576048|gb|EAZ17270.1| hypothetical protein OsJ_32789 [Oryza sativa Japonica Group]
gi|215678943|dbj|BAG96373.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679050|dbj|BAG96480.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737414|dbj|BAG96544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 230
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIAS-TEVTVGRLPERADMVIPVATVSGLHARIQ 116
ERW+L+P GDGD HIG++V P F+IAS VTVGR+PE+AD+V+ VATVSG HAR++
Sbjct: 90 ERWVLEPAGDGDWRHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVATVSGTHARLE 149
Query: 117 KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPS 176
KK SLLVTDL+STNGT+I+E+RL G PGS + FGD HLAMFRVSK+ V+ S
Sbjct: 150 KKEGSLLVTDLESTNGTYINERRLTPGFPTPIDPGSLLIFGDIHLAMFRVSKM-IVDVSS 208
Query: 177 KTEESEEKGDSPPLSSA 193
T E+E++ ++ +S+A
Sbjct: 209 DTNEAEQEAETAQVSAA 225
>gi|242084608|ref|XP_002442729.1| hypothetical protein SORBIDRAFT_08g001890 [Sorghum bicolor]
gi|241943422|gb|EES16567.1| hypothetical protein SORBIDRAFT_08g001890 [Sorghum bicolor]
Length = 231
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 2/141 (1%)
Query: 45 STTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTE-VTVGRLPERADMVI 103
S+ T +ST V E+W+L P GDGD HIG+KV P A EI S + VTVGR+ ++AD+V+
Sbjct: 76 SSATGGSSTAVTTEKWILDPAGDGDWRHIGYKVARPGAIEIISDDAVTVGRVADKADIVL 135
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
P+ATVSG HAR++KKG SLLVTDLDSTNGT+I+E+RL G PGS + FGD HLAM
Sbjct: 136 PIATVSGTHARLEKKGGSLLVTDLDSTNGTYINERRLNPGFPIAIDPGSFLIFGDIHLAM 195
Query: 164 FRVSKIDTVEAPSKTEESEEK 184
FRV K+ VE S +E ++
Sbjct: 196 FRVRKM-RVEVASTEDEGAQQ 215
>gi|168010498|ref|XP_001757941.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690818|gb|EDQ77183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 100/132 (75%), Gaps = 2/132 (1%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
+W+L PVGDG+TSH+ VP+P FE+AS T+GR+ +RAD+VIPVATVSG+HAR++KK
Sbjct: 92 KWVLDPVGDGNTSHLDAPVPLPSGFELASDAATIGRVKDRADVVIPVATVSGVHARLEKK 151
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI-DTVEAPSK 177
L +TDLDSTNGTFI+ +R+R G V +PGS ITFGD HLA+FR ++ D+ A +
Sbjct: 152 KGVLYITDLDSTNGTFINNRRIRPGAVTPVAPGSHITFGDEHLAVFRFLQLEDSSPAETP 211
Query: 178 TEES-EEKGDSP 188
TEES EE ++P
Sbjct: 212 TEESLEESVETP 223
>gi|115487100|ref|NP_001066037.1| Os12g0124000 [Oryza sativa Japonica Group]
gi|108862121|gb|ABA95710.2| FHA domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113648544|dbj|BAF29056.1| Os12g0124000 [Oryza sativa Japonica Group]
Length = 228
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 96/128 (75%), Gaps = 2/128 (1%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIAS-TEVTVGRLPERADMVIPVATVSGLHARIQ 116
ERW+L+P GDGD HIG++V P F+IAS VTVGR+PE+AD+V+ VATVSG HAR++
Sbjct: 87 ERWVLEPAGDGDWRHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVATVSGTHARLE 146
Query: 117 KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPS 176
KK SLLVTDL+STNGT+I+E+RL G PGS + FGD HLAMFRVSK+ V+ PS
Sbjct: 147 KKEGSLLVTDLESTNGTYINERRLSPGFPTPIDPGSLLIFGDIHLAMFRVSKM-VVDVPS 205
Query: 177 KTEESEEK 184
+E++
Sbjct: 206 DASGAEQE 213
>gi|218185154|gb|EEC67581.1| hypothetical protein OsI_34939 [Oryza sativa Indica Group]
Length = 230
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 102/137 (74%), Gaps = 2/137 (1%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIAS-TEVTVGRLPERADMVIPVATVSGLHARIQ 116
ERW+L+P GDGD HIG++V P F+IAS VTVGR+PE+AD+V+ VATVSG HAR++
Sbjct: 90 ERWVLEPAGDGDWRHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVATVSGTHARLE 149
Query: 117 KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPS 176
KK SLLVTDL+STNGT+I+E+RL G PGS + FGD HLAMFRVSK+ V+ S
Sbjct: 150 KKEGSLLVTDLESTNGTYINERRLTPGFPTPIDPGSLLIFGDIHLAMFRVSKM-IVDVSS 208
Query: 177 KTEESEEKGDSPPLSSA 193
T +E++ ++ +S+A
Sbjct: 209 DTNGAEQEAETAQVSAA 225
>gi|302806294|ref|XP_002984897.1| hypothetical protein SELMODRAFT_446054 [Selaginella moellendorffii]
gi|300147483|gb|EFJ14147.1| hypothetical protein SELMODRAFT_446054 [Selaginella moellendorffii]
Length = 354
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 94/125 (75%), Gaps = 6/125 (4%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
+WLL+P+GDGD HIG +VP+P AFE+++ TVGR+ ++AD+VIPV TVSGLHAR++K+
Sbjct: 223 KWLLEPIGDGDCRHIGEEVPLPSAFELSTDAATVGRVADKADIVIPVGTVSGLHARLEKR 282
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKT 178
L+VTDLDSTNGTF++ +R+R G V PGS ITFGD HLA F+VS I+ K
Sbjct: 283 DSMLMVTDLDSTNGTFVNNRRVRPGAVTPVPPGSSITFGDEHLAQFKVSMIE------KG 336
Query: 179 EESEE 183
EE+ E
Sbjct: 337 EENTE 341
>gi|302808519|ref|XP_002985954.1| hypothetical protein SELMODRAFT_446441 [Selaginella moellendorffii]
gi|300146461|gb|EFJ13131.1| hypothetical protein SELMODRAFT_446441 [Selaginella moellendorffii]
Length = 238
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 90/115 (78%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
+WLL+P+GDGD HIG +VP+P AFE+++ TVGR+ ++AD+VIPV TVSGLHAR++K+
Sbjct: 107 KWLLEPIGDGDCRHIGEEVPLPSAFELSTDAATVGRVADKADIVIPVGTVSGLHARLEKR 166
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVE 173
L+VTDLDSTNGTF++ +R+R G V PGS ITFGD HLA F+VS I+ E
Sbjct: 167 DSMLMVTDLDSTNGTFVNNRRVRPGAVTPVPPGSSITFGDEHLAQFKVSMIEKGE 221
>gi|108862123|gb|ABA95708.2| FHA domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 278
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 96/130 (73%), Gaps = 3/130 (2%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIAS-TEVTVGRLPERADMVIPVAT-VSGLHARI 115
ERW+L+P GDGD HIG++V P F+IAS VTVGR+PE+AD+V+ VAT VSG HAR+
Sbjct: 136 ERWVLEPAGDGDWRHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVATAVSGTHARL 195
Query: 116 QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAP 175
+KK SLLVTDL+STNGT+I+E+RL G PGS + FGD HLAMFRVSK+ V+ P
Sbjct: 196 EKKEGSLLVTDLESTNGTYINERRLSPGFPTPIDPGSLLIFGDIHLAMFRVSKM-VVDVP 254
Query: 176 SKTEESEEKG 185
S +E++
Sbjct: 255 SDASGAEQEA 264
>gi|357157635|ref|XP_003577863.1| PREDICTED: uncharacterized protein LOC100835270 [Brachypodium
distachyon]
Length = 222
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 96/129 (74%), Gaps = 3/129 (2%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEI-ASTEVTVGRLPERADMVIPVATVSGLHARIQ 116
E+W+L+P GDGD HIG++V P A EI S VTVGR+PE+AD+ +PVATVSG+HAR++
Sbjct: 79 EKWVLEPAGDGDWRHIGYRVARPGAIEIPTSGAVTVGRVPEKADVAVPVATVSGVHARLE 138
Query: 117 KKGD-SLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAP 175
K D +L VTD+DSTNGT+++E++L G +PGS + FGD HLAMFRV+K+ V+AP
Sbjct: 139 IKDDGTLAVTDMDSTNGTYVNERKLVPGFAVAVNPGSLLIFGDIHLAMFRVTKV-VVDAP 197
Query: 176 SKTEESEEK 184
T +E+
Sbjct: 198 PVTAAGDEQ 206
>gi|77552913|gb|ABA95709.1| FHA domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215765476|dbj|BAG87173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186348|gb|EEC68775.1| hypothetical protein OsI_37309 [Oryza sativa Indica Group]
gi|222616545|gb|EEE52677.1| hypothetical protein OsJ_35061 [Oryza sativa Japonica Group]
Length = 271
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 92/129 (71%), Gaps = 8/129 (6%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIAS-TEVTVGRLPERADMVIPVATVSGLHARIQ 116
ERW+L+P GDGD HIG++V P F+IAS VTVGR+PE+AD+V+ VATVSG HAR++
Sbjct: 136 ERWVLEPAGDGDWRHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVATVSGTHARLE 195
Query: 117 KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPS 176
KK SLLVTDL+STNGT+I+E+RL G PG D HLAMFRVSK+ V+ PS
Sbjct: 196 KKEGSLLVTDLESTNGTYINERRLSPGFPTPIDPG------DIHLAMFRVSKM-VVDVPS 248
Query: 177 KTEESEEKG 185
+E++
Sbjct: 249 DASGAEQEA 257
>gi|116786062|gb|ABK23956.1| unknown [Picea sitchensis]
Length = 215
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 9/151 (5%)
Query: 24 LRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAF 83
++++++ L IRAS + S T ++W+ + VGDGD+SHIG V P AF
Sbjct: 57 IKVESRSIDRLHPIRASASQPSGGT---------DKWVFEFVGDGDSSHIGQAVSPPKAF 107
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E+ TVGRLPE+AD+VIPVATVSG+HAR+++K L V+D++STNGT+ID RL G
Sbjct: 108 ELTLDVATVGRLPEKADIVIPVATVSGIHARLERKEGILFVSDMNSTNGTYIDNTRLSPG 167
Query: 144 VVAVASPGSRITFGDTHLAMFRVSKIDTVEA 174
V V S GS ITFGD +LA FR SK + +++
Sbjct: 168 AVTVLSAGSCITFGDINLATFRFSKKEGIDS 198
>gi|4567284|gb|AAD23697.1| unknown protein [Arabidopsis thaliana]
Length = 235
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 99/163 (60%), Gaps = 28/163 (17%)
Query: 20 QLQGLRIKAKKHRNLG-AIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVP 78
Q+ + AKK R+ +R + A + TS ERWLL+PVGDGDT HIG+KV
Sbjct: 49 QISNISFIAKKPRSHAPVVRTTRASLDENQSPTS---GGERWLLKPVGDGDTRHIGYKVA 105
Query: 79 MPDAFEIAST--------------EVTVGRLPERADMVIPVAT----------VSGLHAR 114
MP FEI+S +VT+GRLPE+AD+VIPVAT VSG+HA
Sbjct: 106 MPAPFEISSFLVFAKITKMGIEQGQVTIGRLPEKADVVIPVATESNTPSLLTSVSGVHAT 165
Query: 115 IQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
I +LLVTD++STNGTFI++KRL GV A A PG+RITFG
Sbjct: 166 INTNEKNLLVTDMNSTNGTFIEDKRLIPGVAAPAFPGTRITFG 208
>gi|116785298|gb|ABK23669.1| unknown [Picea sitchensis]
Length = 219
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 101/155 (65%), Gaps = 13/155 (8%)
Query: 24 LRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAF 83
++++++ L IRAS + S T ++W+ + VGDGD+SHIG V P AF
Sbjct: 57 IKVESRSIDRLHPIRASASQPSGGT---------DKWVFEFVGDGDSSHIGQAVSPPKAF 107
Query: 84 EIASTEVTVGRLPERADMVIPVAT----VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
E+ TVGRLPE+AD+VIPVAT +SG+HAR+++K L V+D++STNGT+ID R
Sbjct: 108 ELTLDVATVGRLPEKADIVIPVATGSSKLSGIHARLERKEGILFVSDMNSTNGTYIDNTR 167
Query: 140 LRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEA 174
L G V V S GS ITFGD +LA FR SK + +++
Sbjct: 168 LSPGAVTVLSAGSCITFGDINLATFRFSKKEGIDS 202
>gi|224131710|ref|XP_002328089.1| predicted protein [Populus trichocarpa]
gi|222837604|gb|EEE75969.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 84/126 (66%), Gaps = 28/126 (22%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
MPDAFEIAS+EVT E+ADMVIPVATVS LHARIQKKG +L+VTDLDS NGTFIDEK
Sbjct: 1 MPDAFEIASSEVT-----EKADMVIPVATVSALHARIQKKGGTLVVTDLDSNNGTFIDEK 55
Query: 139 RLRSGVVAVAS-------------PGSRITF----------GDTHLAMFRVSKIDTVEAP 175
RLR G++ + S P + GDTHLAMF VSK+ TVEAP
Sbjct: 56 RLRPGLLELLSVYRLEVVSHLNVCPNGAVKILRNDLKTLLVGDTHLAMFLVSKLATVEAP 115
Query: 176 SKTEES 181
SK EES
Sbjct: 116 SKPEES 121
>gi|116793205|gb|ABK26653.1| unknown [Picea sitchensis]
Length = 240
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 101/176 (57%), Gaps = 34/176 (19%)
Query: 24 LRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAF 83
++++++ L IRAS + S T ++W+ + VGDGD+SHIG V P AF
Sbjct: 57 IKVESRSIDRLHPIRASASQPSGGT---------DKWVFEFVGDGDSSHIGQAVSPPKAF 107
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E+ TVGRLPE+AD+VIPVATVSG+HAR+++K L V+D++STNGT+ID RL G
Sbjct: 108 ELTLDVATVGRLPEKADIVIPVATVSGIHARLERKEGILFVSDMNSTNGTYIDNTRLSPG 167
Query: 144 VVAVASPGSRITF-------------------------GDTHLAMFRVSKIDTVEA 174
V V S GS ITF GD +LA FR SK + +++
Sbjct: 168 AVTVLSAGSCITFESKSHDMVIDCITSYSFQSLPSFILGDINLATFRFSKKEGIDS 223
>gi|116783200|gb|ABK22834.1| unknown [Picea sitchensis]
Length = 240
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 96/170 (56%), Gaps = 34/170 (20%)
Query: 24 LRIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAF 83
++++++ L IRAS + S T ++W+ + VGDGD+SHIG V P AF
Sbjct: 57 IKVESRSIDRLHPIRASASQPSGGT---------DKWVFEFVGDGDSSHIGQAVSPPKAF 107
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E+ TVGRLPE+AD+VIPVATVSG+HAR+++K L V+D++STNGT+ID RL G
Sbjct: 108 ELTLDVATVGRLPEKADIVIPVATVSGIHARLERKEGILFVSDMNSTNGTYIDNTRLSPG 167
Query: 144 VVAVASPGSRITF-------------------------GDTHLAMFRVSK 168
V S GS ITF GD +LA FR SK
Sbjct: 168 AVTALSAGSCITFESKSHDMVIDCITCYSFESLPSFILGDINLATFRFSK 217
>gi|384246676|gb|EIE20165.1| SMAD/FHA domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 173
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
+ +L P GDG T H+ V +P+ E+ VGR E AD+VIP+ TVSG HA ++
Sbjct: 45 KLVLVPTGDGSTKHLEEPVSLPEEIELKDGVFEVGR-EEPADVVIPIPTVSGRHALLRIT 103
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRV 166
G + VTDL STNGT++DE+ L + A GSRITFGD LAMF +
Sbjct: 104 GTKVQVTDLGSTNGTYLDEEELPTNRAAEVYVGSRITFGDASLAMFEL 151
>gi|255079456|ref|XP_002503308.1| predicted protein [Micromonas sp. RCC299]
gi|226518574|gb|ACO64566.1| predicted protein [Micromonas sp. RCC299]
Length = 161
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 52 STDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGR-LPERADMVIPVATVSG 110
S V A RWLL+ G H+G V +P FE+ V VGR E + I V TVSG
Sbjct: 41 SLRVFAARWLLKNCGPKTIEHLGEDVEIPGDFELKGPRVVVGRQASESVSLEIAVPTVSG 100
Query: 111 LHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
HA ++ D+++VTDL STNGTFI+ + L++G+ GS + FGD LA F + K+
Sbjct: 101 AHAMLEVSDDAVMVTDLSSTNGTFIEGEELQAGIAYELKEGSEVIFGDEFLACFELLKL 159
>gi|308806770|ref|XP_003080696.1| forkhead-associated domain-containing protein / FHA
domain-containing protein (ISS) [Ostreococcus tauri]
gi|116059157|emb|CAL54864.1| forkhead-associated domain-containing protein / FHA
domain-containing protein (ISS) [Ostreococcus tauri]
Length = 164
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLP-ERADMVIPVATVSGLHARIQK 117
R+ L+ GDG SH+ VP P EI + + +GR+ E ++ I V TVSG HA I
Sbjct: 47 RFTLRNCGDGSQSHLDAPVPAPGDLEIVAVKSVIGRVQSEAVNLAIGVPTVSGAHAMIDL 106
Query: 118 KGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSK 177
++VTDL STNGTFID + L GV G + FGD LA + + ++T++
Sbjct: 107 VNGKVMVTDLTSTNGTFIDGEELLPGVPTQLMVGGEVIFGDEFLARYEL--VETLD---- 160
Query: 178 TEESE 182
EESE
Sbjct: 161 -EESE 164
>gi|307103184|gb|EFN51446.1| hypothetical protein CHLNCDRAFT_140170 [Chlorella variabilis]
Length = 152
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS 121
L P GDG H+ +V +P A ++ +GR P AD++I + TVS HA ++ S
Sbjct: 21 LTPTGDGTQQHLDAEVAIPGAIKLQEGLFELGRAPP-ADILIEIPTVSTRHATLRVGEAS 79
Query: 122 LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVE 173
++VTDL STNGT ID + L + A PGS I FGD ++A FR +D VE
Sbjct: 80 VIVTDLGSTNGTTIDGEELEATQAAELKPGSEIVFGDKYIAKFR---LDVVE 128
>gi|159469692|ref|XP_001692997.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277799|gb|EDP03566.1| predicted protein [Chlamydomonas reinhardtii]
Length = 146
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 38 RASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHI-GFKVPMPDAFEIASTEVTVGRLP 96
RA S T+ T V+ + +LQP+G G T H+ G KV P + + VGR+
Sbjct: 12 RARAGISGRTSRRTHVAVS-NKLVLQPIGSGSTEHLDGEKVTPPGPVPLREGTLDVGRV- 69
Query: 97 ERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF 156
E D+V+PV TVS HA + +GD +LV D++STNGT ++ +++ G I F
Sbjct: 70 EPCDIVLPVPTVSSRHAILTIEGDKVLVIDVNSTNGTMVNGAEIKAMDYVELPIGGEIVF 129
Query: 157 GDTHLAMFRVSKI 169
GD LA F++ K+
Sbjct: 130 GDEFLAKFQLQKL 142
>gi|108863946|gb|ABG22342.1| FHA domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 166
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIAS-TEVTVGRLPERADMVIPVAT 107
ERW+L+P GDGD HIG++V P F+IAS VTVGR+PE+AD+V+ VAT
Sbjct: 90 ERWVLEPAGDGDWRHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVAT 140
>gi|302850814|ref|XP_002956933.1| hypothetical protein VOLCADRAFT_107456 [Volvox carteri f.
nagariensis]
gi|300257814|gb|EFJ42058.1| hypothetical protein VOLCADRAFT_107456 [Volvox carteri f.
nagariensis]
Length = 127
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 66 GDGDTSHI-GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLV 124
G+G H+ G KV +P + + VGR+ + D+V+PV TVS HA + +GD +LV
Sbjct: 18 GNGSCEHLDGEKVELPGPVVLREGTLDVGRV-DPCDIVLPVPTVSSRHAILTVEGDKVLV 76
Query: 125 TDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
D++STNGT I+ +++ G I FGD LA F + K+
Sbjct: 77 IDVNSTNGTSINGTEIKAMDYVELPIGGEIVFGDEFLAKFTLQKV 121
>gi|412991453|emb|CCO16298.1| predicted protein [Bathycoccus prasinos]
Length = 159
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 55 VAAERWLLQPVGDGDTSHI-------GFKVPMPDAFEIASTEVTVGRLPERA-DMVIPVA 106
+ ++ ++L+ VGD D +H+ + +P + + VGR+ A ++ + VA
Sbjct: 35 IQSKAFILRNVGDLDRNHLEEEGNTEKQEDAIPRVLRLNGAKSVVGRVSSSAVNLAVGVA 94
Query: 107 TVSGLHARIQKKGDS-LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFR 165
TVS HA + D ++VTDL STNGT+ID + L G+ + G + FGD H A F
Sbjct: 95 TVSSAHAMVDLTPDGKVMVTDLTSTNGTYIDGEELLPGIPQELTEGGEVIFGDEHCARFE 154
Query: 166 V 166
+
Sbjct: 155 L 155
>gi|145349348|ref|XP_001419098.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579329|gb|ABO97391.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 112
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 71 SHIGFKVPMPDAFEIASTEVTVGRL-PERADMVIPVATVSGLHARIQKKGDSLLVTDLDS 129
+H+ V P I +T+ +GR E ++ I V TVSG HA I ++VTDL S
Sbjct: 2 AHLDAPVRAPGDLTIEATKSVIGRQRSEAVNLPIEVPTVSGAHAMIDLVDGKVMVTDLTS 61
Query: 130 TNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRV 166
TNGTFID + L GV G + FGD LA F +
Sbjct: 62 TNGTFIDGEELLPGVPTQLVVGGEVIFGDEFLARFEL 98
>gi|427725264|ref|YP_007072541.1| GAF sensor-containing adenylate/guanylate cyclase [Leptolyngbya sp.
PCC 7376]
gi|427356984|gb|AFY39707.1| adenylate/guanylate cyclase with GAF sensor and FHA domain
[Leptolyngbya sp. PCC 7376]
Length = 614
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ + +E+ +GRLPE + + ++ VS H RIQ+K D V DL STNGT++++KRL
Sbjct: 66 EVLNLDQSEIVIGRLPE-CTVTLALSQVSRYHTRIQRKDDQWYVEDLKSTNGTYLNDKRL 124
Query: 141 RSGVVAVASPGSRITFGDTHL 161
R V+ + + G + G T +
Sbjct: 125 R--VLQLLNNGDILRIGTTSI 143
>gi|303286697|ref|XP_003062638.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456155|gb|EEH53457.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 733
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 22/120 (18%)
Query: 62 LQPVGDGDTSHI--GFKVPMPDAFEIASTEVTVGRLPER------------ADMVIPVAT 107
L P GDG + H+ G +VP S TV +LP R +D+ + + T
Sbjct: 61 LVPCGDGSSDHLPPGTRVP-------PSLAKTVVKLPRRDGGVVVVGRERPSDVRLNIGT 113
Query: 108 VSGLHARIQKKGDS-LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRV 166
VSG HA ++ D + VTD S+NGT +D + L+ G S G +T GD HLA F V
Sbjct: 114 VSGQHASFERDADGDVYVTDRGSSNGTDVDGRTLKPGTRYKLSVGDVVTLGDPHLARFEV 173
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
V V HA + + G + V DL S GTF+ +++ G+ +PG+ + GD A
Sbjct: 347 VRGVDSAHASVLRVGGGVYVEDLGSAAGTFVGGRQISPGLQYALTPGASVMLGDGGCAF 405
>gi|303278268|ref|XP_003058427.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459587|gb|EEH56882.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 191
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D+ + TVSG HA ++ D++ V DL STNGTFID + L++GV + FGD
Sbjct: 122 DIALYGTTVSGAHAMLEVSEDAVRVVDLSSTNGTFIDGEELQAGVAYALDENGEVVFGDE 181
Query: 160 HLAMFRVSK 168
LA +++ K
Sbjct: 182 FLACYQLVK 190
>gi|345018252|ref|YP_004820605.1| FHA domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033595|gb|AEM79321.1| FHA domain containing protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 134
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GR E D+VI VS HA I+K+G + DL+STNGTF++ KR++ +A
Sbjct: 63 TIGR-SEECDIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFVNGKRIKG--IAKIKN 119
Query: 151 GSRITFGDTHL 161
G IT GD L
Sbjct: 120 GDVITLGDVEL 130
>gi|442318363|ref|YP_007358384.1| Fis family transcriptional regulator [Myxococcus stipitatus DSM
14675]
gi|441486005|gb|AGC42700.1| Fis family transcriptional regulator [Myxococcus stipitatus DSM
14675]
Length = 454
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F +A+ + VG+ P+ D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 43 FPLANEALRVGKAPDN-DVVIDHPTVSRNHLMVRRQGDRFLVQDLGSTNGTFLDGAQVRE 101
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 102 ---AYLRPGALLEVGDVRL 117
>gi|357405464|ref|YP_004917388.1| hypothetical protein MEALZ_2110 [Methylomicrobium alcaliphilum 20Z]
gi|351718129|emb|CCE23796.1| exported protein of unknown function [Methylomicrobium alcaliphilum
20Z]
Length = 448
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 92 VGRLPERADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+GR P + VI VS HA++ +++G LLV DLDSTNG F+D +L + V A
Sbjct: 371 LGRDPNQVSFVIEQTDVSRCHAQLRWHERRG--LLVMDLDSTNGVFVDHAKLANRVWATI 428
Query: 149 SPGSRITFGDTHLAMFRV 166
PG R+ FG + ++R+
Sbjct: 429 KPGQRLIFGSEQV-VYRI 445
>gi|34329429|gb|AAQ63917.1| mutant NtrC-like activator [Myxococcus xanthus]
Length = 507
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F +A+ + VG+ P+ D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 96 FPLANEALRVGKAPDN-DVVIDHPTVSRNHLVVRRQGDRFLVQDLGSTNGTFLDGAQVRE 154
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 155 ---AFLRPGALLEVGDVRL 170
>gi|167039704|ref|YP_001662689.1| FHA domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915047|ref|ZP_07132362.1| FHA domain containing protein [Thermoanaerobacter sp. X561]
gi|307724970|ref|YP_003904721.1| FHA domain containing protein [Thermoanaerobacter sp. X513]
gi|326389759|ref|ZP_08211324.1| FHA domain containing protein [Thermoanaerobacter ethanolicus JW
200]
gi|166853944|gb|ABY92353.1| FHA domain containing protein [Thermoanaerobacter sp. X514]
gi|300888771|gb|EFK83918.1| FHA domain containing protein [Thermoanaerobacter sp. X561]
gi|307582031|gb|ADN55430.1| FHA domain containing protein [Thermoanaerobacter sp. X513]
gi|325994241|gb|EGD52668.1| FHA domain containing protein [Thermoanaerobacter ethanolicus JW
200]
Length = 134
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ T+GR E D+VI VS HA I+K+G + DL+STNGTF++ KR+
Sbjct: 57 NLFEVT----TIGR-SEECDIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFVNGKRI 111
Query: 141 RSGVVAVASPGSRITFGDTHLAM 163
+ +A + IT GD L
Sbjct: 112 KR--IAKITNNDVITLGDVELKF 132
>gi|108758198|ref|YP_629602.1| Fis family transcriptional regulator [Myxococcus xanthus DK 1622]
gi|108462078|gb|ABF87263.1| sigma-54 dependent transcriptional regulator, Fis family
[Myxococcus xanthus DK 1622]
Length = 454
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F +A+ + VG+ P+ D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 43 FPLANEALRVGKAPDN-DVVIDHPTVSRNHLVVRRQGDRFLVQDLGSTNGTFLDGAQVRE 101
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 102 ---AFLRPGALLEVGDVRL 117
>gi|5902707|sp|Q40412.1|ABA2_NICPL RecName: Full=Zeaxanthin epoxidase, chloroplastic; Flags: Precursor
gi|1370274|emb|CAA65048.1| zeaxanthin epoxidase [Nicotiana plumbaginifolia]
Length = 663
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 37 IRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVT 91
R SE + D A ER WLL P G+ + + + + V+
Sbjct: 504 CRLSEKANDQLRNWFEDDDALERATDAEWLLLPAGNSNAALETLVLSRDENMPCNIGSVS 563
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLRS--GVVA 146
+P ++ +VIP+ VS +HARI KG + VTDL S +GT+I + +R R+
Sbjct: 564 HANIPGKS-VVIPLPQVSEMHARISYKGGAFFVTDLRSEHGTWITDNEGRRYRASPNFPT 622
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
P I FG A FRV ++ P KT EE+
Sbjct: 623 RFHPSDIIEFGSDKKAAFRVK---VMKFPPKTAAKEER 657
>gi|256750638|ref|ZP_05491524.1| FHA domain containing protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750478|gb|EEU63496.1| FHA domain containing protein [Thermoanaerobacter ethanolicus
CCSD1]
Length = 134
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ T+GR E D+VI VS HA I+K+G + DL+STNGTF++ KR+
Sbjct: 57 NLFEVT----TIGR-SEECDIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFVNGKRI 111
Query: 141 RSGVVAVASPGSRITFGDTHLAM 163
+ +A + IT GD L
Sbjct: 112 KR--IAKITNNDVITLGDVELKF 132
>gi|225387832|ref|ZP_03757596.1| hypothetical protein CLOSTASPAR_01602 [Clostridium asparagiforme
DSM 15981]
gi|225046075|gb|EEG56321.1| hypothetical protein CLOSTASPAR_01602 [Clostridium asparagiforme
DSM 15981]
Length = 468
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 89 EVTVGRLPERADMVIPVAT--VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
V +GR P R D+V P T VSG+H + +G + + DL S+ GTF++ RL+ +
Sbjct: 383 RVRIGRDPARNDLVFPSGTAGVSGVHCELLLQGGQIGIRDLGSSYGTFVNGNRLKPNQLC 442
Query: 147 VASPGSRITFGDTH 160
PG R+ G H
Sbjct: 443 ELRPGDRVNIGSAH 456
>gi|186681036|ref|YP_001864232.1| FHA domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186463488|gb|ACC79289.1| FHA domain containing protein [Nostoc punctiforme PCC 73102]
Length = 263
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 111 LHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF--GDTHLAMFRVSK 168
+HA+I GD +TDLDS+NGT+I+ +L+ V PG R++F GD MFRV
Sbjct: 59 IHAQIWVNGDEYHITDLDSSNGTYINGAKLQPQVFCPLHPGDRVSFGQGDKITFMFRVQ- 117
Query: 169 IDTVEAPSKTEESEEKGDSPPLSSA 193
+ S +PP SSA
Sbjct: 118 ----------QHSASATKNPPSSSA 132
>gi|289578948|ref|YP_003477575.1| FHA domain-containing protein [Thermoanaerobacter italicus Ab9]
gi|297545160|ref|YP_003677462.1| FHA domain-containing protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528661|gb|ADD03013.1| FHA domain containing protein [Thermoanaerobacter italicus Ab9]
gi|296842935|gb|ADH61451.1| FHA domain containing protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 134
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GR E D+VI VS HA I+K+G + DL+STNGTFI+ KR++ +A
Sbjct: 63 TIGR-SEECDIVIESPYVSARHAIIRKRGRRFYIQDLNSTNGTFINGKRVKG--IAKIKN 119
Query: 151 GSRITFGDTHL 161
IT GD L
Sbjct: 120 NDVITLGDVEL 130
>gi|115374051|ref|ZP_01461340.1| sigma-54 interaction domain family [Stigmatella aurantiaca DW4/3-1]
gi|115368941|gb|EAU67887.1| sigma-54 interaction domain family [Stigmatella aurantiaca DW4/3-1]
Length = 504
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ + +G+ PE D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 93 FPLSGEVLRIGKAPEN-DVVIDHPTVSRNHLLVRRQGDRFLVQDLGSTNGTFLDGAQVRE 151
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 152 ---AYLRPGALLEVGDVRL 167
>gi|255080398|ref|XP_002503779.1| predicted protein [Micromonas sp. RCC299]
gi|226519046|gb|ACO65037.1| predicted protein [Micromonas sp. RCC299]
Length = 689
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 22/120 (18%)
Query: 62 LQPVGDGDTSHI--GFKVPMPDAFEIASTEVTVGRLPERA------------DMVIPVAT 107
L P GDG H+ G +VP +A T++ RLP RA D+ + + T
Sbjct: 59 LVPCGDGTKDHLPKGTRVPG----SLAKTQI---RLPSRAGNSVVVGREKPADVSLGIGT 111
Query: 108 VSGLHARIQKKGDS-LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRV 166
VS HA+ + D + VTD+ S+NGT +D + + G + S G +T GD HLA + V
Sbjct: 112 VSAQHAKFEAGEDGEVYVTDMGSSNGTDVDGRPVPRGQMFKLSVGDIVTLGDPHLARYEV 171
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 40 SEADSSTTTTTTSTDVAAERWLLQPVG-DGDTSHIGFKVPMPDAFEIASTEVTVGRLPER 98
+EA ++ + ER + PVG G + VP+ ++ GR
Sbjct: 279 TEAPAAVAPVRKKKFASEERVVFTPVGWSGPAVELEPGVPI---------KLGTGRKKGD 329
Query: 99 ADMVIP-VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
AD+++ V V HA + + G ++ + DL S+ GTF+ +++R G+ +PG+ + G
Sbjct: 330 ADVILTGVQGVDSSHAVLLRVGGAVYIEDLGSSMGTFVGGRQVRPGLQYELTPGADVQLG 389
Query: 158 DTHLAM 163
D A
Sbjct: 390 DGGCAF 395
>gi|392939400|ref|ZP_10305044.1| FHA domain-containing protein [Thermoanaerobacter siderophilus SR4]
gi|392291150|gb|EIV99593.1| FHA domain-containing protein [Thermoanaerobacter siderophilus SR4]
Length = 134
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ T+GR E D+VI VS HA I+K+G + DL+STNGTF++ KR+
Sbjct: 57 NLFEVT----TIGR-SEECDIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFVNGKRI 111
Query: 141 RSGVVAVASPGSRITFGDTHLAM 163
+ +A IT GD L
Sbjct: 112 KG--IAKIRNNDVITLGDVELKF 132
>gi|167036993|ref|YP_001664571.1| FHA domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115411|ref|YP_004185570.1| Forkhead-associated protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855827|gb|ABY94235.1| FHA domain containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319928502|gb|ADV79187.1| Forkhead-associated protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 134
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ T+GR E D+VI VS HA I+K+G + DL+STNGTFI+ KR+
Sbjct: 57 NLFEVT----TIGR-SEECDIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFINGKRI 111
Query: 141 RSGVVAVASPGSRITFGDTHLAM 163
+ +A IT GD L
Sbjct: 112 KG--IAKIRNNDVITLGDVDLKF 132
>gi|336430825|ref|ZP_08610763.1| hypothetical protein HMPREF0994_06769 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336016581|gb|EGN46361.1| hypothetical protein HMPREF0994_06769 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 523
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ G+L R +++P A+VS +HAR+ +K + + DL+S NGT+I+ RL V
Sbjct: 448 MIAGKLRNRVQLLLPDASVSRIHARLVEKEGRVALMDLNSANGTYINGIRLEQNESMVLE 507
Query: 150 PGSRITFGD 158
G I FGD
Sbjct: 508 KGDEIRFGD 516
>gi|310819370|ref|YP_003951728.1| Fis family sigma-54 dependent transcriptional regulator
[Stigmatella aurantiaca DW4/3-1]
gi|309392442|gb|ADO69901.1| Sigma-54 dependent transcriptional regulator, Fis family
[Stigmatella aurantiaca DW4/3-1]
Length = 454
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ + +G+ PE D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 43 FPLSGEVLRIGKAPEN-DVVIDHPTVSRNHLLVRRQGDRFLVQDLGSTNGTFLDGAQVRE 101
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 102 ---AYLRPGALLEVGDVRL 117
>gi|304311248|ref|YP_003810846.1| hypothetical protein HDN1F_16110 [gamma proteobacterium HdN1]
gi|301796981|emb|CBL45194.1| Hypothetical protein HDN1F_16110 [gamma proteobacterium HdN1]
Length = 336
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+T+GR + ++ I +S HA + KGD L + DLDS NG+F++ +R+ V +
Sbjct: 140 ITLGR-STKCEISIDDEYLSRRHAELSVKGDRLRLLDLDSANGSFVNSERV---VEKLMR 195
Query: 150 PGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSSAKS 195
PG R++FGD +F V+ + E + T+E +E G++ +A S
Sbjct: 196 PGDRLSFGDH---IFLVAGPISAEGQASTDEPDELGEATVFRAAPS 238
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
R +V+ A+V+ +HA +QK+GD L + DL S GT+++ R+R
Sbjct: 34 RNHLVVDDASVAEVHAEVQKEGDHLYLDDLKSPTGTWVNGTRIR 77
>gi|20808373|ref|NP_623544.1| FHA-domain-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|20516984|gb|AAM25148.1| FHA-domain-containing proteins [Thermoanaerobacter tengcongensis
MB4]
Length = 132
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
FE+ S +GR E D+VI VS HA I+K+G + DL+STNGTF++ KR++
Sbjct: 58 FEVTS----IGRSDE-CDIVIESPYVSARHALIKKRGKRFYIEDLNSTNGTFVNGKRVK- 111
Query: 143 GVVAVASPGSRITFGDTHLAM 163
VA G IT GD L
Sbjct: 112 --VARIKNGDIITLGDVDLKF 130
>gi|255281801|ref|ZP_05346356.1| putative FHA domain protein [Bryantella formatexigens DSM 14469]
gi|255267474|gb|EET60679.1| FHA domain protein [Marvinbryantia formatexigens DSM 14469]
Length = 620
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D + + VG+LP ++D+V+ ++VS +HARIQ+ G + D++STNGTF++ +RL
Sbjct: 535 DGIVLENDSYIVGKLPSQSDIVLEHSSVSRVHARIQRYGKDYYLCDMNSTNGTFLNGQRL 594
Query: 141 RSGVVAVASPGSRITFG 157
P I F
Sbjct: 595 AIKEPVKIRPDDEIAFA 611
>gi|290361322|dbj|BAI79257.1| zeaxanthin epoxidase [Citrus unshiu]
Length = 664
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGS 152
R +VIP A VS +HARI K + + DL S +GT++ + R+ S A P
Sbjct: 568 RTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 627
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
I FG A+FRV I T P+ E +E G+
Sbjct: 628 TIEFGSDKKAIFRVKVIGT--PPNNNSERKEAGE 659
>gi|17402597|dbj|BAB78733.1| zeaxanthin epoxidase [Citrus unshiu]
Length = 664
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGS 152
R +VIP A VS +HARI K + + DL S +GT++ + R+ S A P
Sbjct: 568 RTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 627
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
I FG A+FRV I T P+ E +E G+
Sbjct: 628 TIEFGSDKKAIFRVKVIGT--PPNNNSERKEAGE 659
>gi|290361326|dbj|BAI79259.1| zeaxanthin epoxidase [Citrus sinensis]
Length = 664
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGS 152
R +VIP A VS +HARI K + + DL S +GT++ + R+ S A P
Sbjct: 568 RTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 627
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
I FG A+FRV I T P+ E +E G+
Sbjct: 628 TIEFGSDKKAIFRVKVIGT--PPNNNSERKEAGE 659
>gi|190576749|gb|ACE79170.1| zeaxanthin epoxidase [Citrus maxima]
Length = 664
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGS 152
R +VIP A VS +HARI K + + DL S +GT++ + R+ S A P
Sbjct: 568 RTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 627
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
I FG A+FRV I T P+ E +E G+
Sbjct: 628 TIEFGSDKKAIFRVKVIGT--PPNNNSERKEAGE 659
>gi|290361324|dbj|BAI79258.1| zeaxanthin epoxidase [Citrus unshiu]
Length = 664
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGS 152
R +VIP A VS +HARI K + + DL S +GT++ + R+ S A P
Sbjct: 568 RTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 627
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
I FG A+FRV I T P+ E +E G+
Sbjct: 628 TIEFGSDKKAIFRVKVIGT--PPNNNSERKEAGE 659
>gi|406905544|gb|EKD46978.1| hypothetical protein ACD_66C00270G0005 [uncultured bacterium]
Length = 478
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D+VI TVS H IQ DS L+ DL STNGT+I+ R++ G + SPG +T G+T
Sbjct: 61 DIVINDKTVSRYHLEIQSTEDSYLMKDLGSTNGTYINGSRIKEGFL---SPGDILTVGNT 117
Query: 160 HLAM 163
L
Sbjct: 118 KLEF 121
>gi|154338129|ref|XP_001565289.1| putative protein kinase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062338|emb|CAM42197.1| putative protein kinase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 543
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 17/107 (15%)
Query: 66 GDGDTSHIGFKVPMPDAFEI------ASTEVT----------VGRLPERADMVIPVATVS 109
GDG+ G + P+ FE+ A+T V +GR P+ D+V+P+ VS
Sbjct: 56 GDGEEVQHGRQHAEPELFELTPLGGSANTSVCATRFGVEGLRIGRDPDCCDLVLPLNAVS 115
Query: 110 GLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF 156
LH + G+ + V D +S NGTFI+ +R+ G +V P +++F
Sbjct: 116 RLHCVLSVLGNDVFVHD-NSFNGTFINGRRVGRGRCSVLHPRDKLSF 161
>gi|256823926|ref|YP_003147886.1| FHA domain-containing protein [Kytococcus sedentarius DSM 20547]
gi|256687319|gb|ACV05121.1| FHA domain-containing protein [Kytococcus sedentarius DSM 20547]
Length = 163
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 78 PMPDA-FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
PM A + ++ V +GR PE A + + ++SG HAR+ ++ DL STNGT++D
Sbjct: 78 PMRGASLSLTTSPVVIGRNPE-ASLSVDDDSMSGAHARVSPDAHGWVIEDLGSTNGTWVD 136
Query: 137 EKRLRSGVVAVASPGSRITFGDT 159
++RLR V VA G+RI G T
Sbjct: 137 DERLRGVVPLVA--GTRIRVGQT 157
>gi|449542843|gb|EMD33821.1| hypothetical protein CERSUDRAFT_117894 [Ceriporiopsis subvermispora
B]
Length = 494
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 77 VPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ----KKGDSLLVTDLDSTNG 132
VP D + +T ++GR R D V+ +S H I + G SL+ STNG
Sbjct: 71 VPRLDFYRHKNT-YSIGRSNLRCDCVLAGQKISQQHCTIHWEHFENGSSLVTLKDTSTNG 129
Query: 133 TFIDEKRLRSGVVAVASPGSRITFG 157
TF+DE+RLR+G V G + FG
Sbjct: 130 TFVDERRLRTGYTEVLRDGQEVAFG 154
>gi|206901593|ref|YP_002251490.1| forkhead-associated protein [Dictyoglomus thermophilum H-6-12]
gi|206740696|gb|ACI19754.1| forkhead-associated protein [Dictyoglomus thermophilum H-6-12]
Length = 153
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 8 SVPFHSSRTLLTQLQG----LRIKAKKHRNLGAI-RASEADSSTTTTTTSTDVAAERWLL 62
S+ F+ LL L LR+K +K L + + E S++ T + W
Sbjct: 2 SLVFYIMLALLIILVAIDIALRLKKEKKPQLRKLEKGEELISTSNTMKLDASLLPINWAY 61
Query: 63 QPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSL 122
+ G+ FK I E T+GR PE D+VIP TVS HA+I + D
Sbjct: 62 LIIKHGENRGKDFK--------IIKDETTIGREPEN-DIVIPNPTVSRFHAKITRSEDKY 112
Query: 123 LVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
+ DL S NGT ++ R+ ++ G + GD L
Sbjct: 113 FIEDLGSANGTMVNGIRVTKELL---HDGDIVQLGDVVLVF 150
>gi|347755127|ref|YP_004862691.1| serine phosphatase RsbU [Candidatus Chloracidobacterium
thermophilum B]
gi|347587645|gb|AEP12175.1| Serine phosphatase RsbU, regulator of sigma subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 591
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
P + T+GR RAD+++P + S +HA +Q+ G + ++ DL S NGT+ +R
Sbjct: 13 PHRILLVKPRYTIGR-SVRADIMVPDSFASRIHAALQQDGQTYILEDLHSANGTYYQGQR 71
Query: 140 LRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKT 178
L + PG R G+T L + + APS T
Sbjct: 72 LAQPI--RLHPGERFRIGETELELVPETHFTQTAAPSVT 108
>gi|290361328|dbj|BAI79260.1| zeaxanthin epoxidase [Citrus sinensis]
Length = 664
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGS 152
R +VIP A VS +HARI K + + DL S +GT++ + R+ S A P
Sbjct: 568 RTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 627
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
I FG A+FRV + T P+ E +E G+
Sbjct: 628 TIEFGSDKKAIFRVKVMGT--PPNNNSERKEAGE 659
>gi|358637191|dbj|BAL24488.1| metal dependent phosphohydrolase/3',5'-cyclic-nucleotide
phosphodiesterase [Azoarcus sp. KH32C]
Length = 641
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 89 EVTVGRLPERA-----DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
EV +GR P+ + + IP TVS HARI+ +G + V DL S NGTF+ KRL+ G
Sbjct: 32 EVVIGRDPQDSLASDRFLCIPEHTVSRRHARIRLRGGAYFVEDLHSFNGTFVLGKRLQPG 91
Query: 144 VVAVASPGSRITFGDTHLAM 163
G +T H+
Sbjct: 92 AWHPLHDGDELTLSSAHIVF 111
>gi|405355283|ref|ZP_11024509.1| sigma-54 dependent transcriptional regulator, Fis family
[Chondromyces apiculatus DSM 436]
gi|397091625|gb|EJJ22427.1| sigma-54 dependent transcriptional regulator, Fis family
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 454
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F +A+ + VG+ + D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 43 FPLANEALRVGKAADN-DVVIDHPTVSRNHLVVRRQGDRFLVQDLGSTNGTFLDGAQVRE 101
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 102 ---AFLRPGALLEVGDVRL 117
>gi|145294101|ref|YP_001136922.1| hypothetical protein cgR_0059 [Corynebacterium glutamicum R]
gi|417970295|ref|ZP_12611229.1| hypothetical protein CgS9114_04660 [Corynebacterium glutamicum
S9114]
gi|140844021|dbj|BAF53020.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045594|gb|EGV41265.1| hypothetical protein CgS9114_04660 [Corynebacterium glutamicum
S9114]
Length = 154
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 21 LQGLRIK---AKKHRNLGAIRASEADSSTT--TTTTSTDVAAERWLLQPVGDGDTSHIGF 75
L GLRI L A+RA AD T +T+ST VAA + L + +
Sbjct: 6 LLGLRIALLVVLWFFVLMALRAMRADLKVTGQASTSSTSVAAPQGLARAFNRSSPPRLLT 65
Query: 76 KVPMPDA---FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNG 132
V P A E+ S ++T+GR PE V+ SG+HAR+ K+G V DLDS NG
Sbjct: 66 VVEGPLAGSSIEV-SEDMTMGRSPE-CTFVVGDDYASGMHARVFKRGSEWFVEDLDSRNG 123
Query: 133 TFIDEKRL 140
TF+ R+
Sbjct: 124 TFVGGTRI 131
>gi|338530088|ref|YP_004663422.1| sigma-54 dependent transcription regulator [Myxococcus fulvus HW-1]
gi|337256184|gb|AEI62344.1| sigma-54 dependent transcription regulator [Myxococcus fulvus HW-1]
Length = 454
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F +A+ + VG+ + D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 43 FPLANDALRVGKAADN-DVVIDHPTVSRNHLVVRRQGDRFLVQDLGSTNGTFLDGAQVRE 101
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 102 ---AFLRPGALLEVGDVRL 117
>gi|256826783|ref|YP_003150742.1| FHA domain-containing protein [Cryptobacterium curtum DSM 15641]
gi|256582926|gb|ACU94060.1| FHA domain-containing protein [Cryptobacterium curtum DSM 15641]
Length = 138
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
V VGR P AD+VI + VSG HAR G +L + DL STNGT+++ +R+R +
Sbjct: 65 VIVGRNPG-ADIVIGASYVSGRHARFTLMGQNLFIEDLGSTNGTYVNGQRIREAI 118
>gi|108762982|ref|YP_631310.1| type II/IV secretion system protein [Myxococcus xanthus DK 1622]
gi|108466862|gb|ABF92047.1| type II/IV secretion system protein [Myxococcus xanthus DK 1622]
Length = 595
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E EVT+GRLP D+++ VS H+RI K ++ D+ STNGTF++ K++
Sbjct: 17 EYHKNEVTIGRLPGN-DIILAKGNVSKYHSRIVAKDGKFIIVDMKSTNGTFVNGKKI--A 73
Query: 144 VVAVASPGSRITFGDTHL---AMFRVSKIDTVEAPSKTEESEEKGDSP 188
V P ++ GD L A+ + T + E +E+G+ P
Sbjct: 74 APQVLKPTDQVYIGDYILNVEALEDEGPVMTRAGQPEEEYYDEQGEEP 121
>gi|338534291|ref|YP_004667625.1| type II/IV secretion system protein [Myxococcus fulvus HW-1]
gi|337260387|gb|AEI66547.1| type II/IV secretion system protein [Myxococcus fulvus HW-1]
Length = 593
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E EVT+GRLP D+++ VS H+RI K ++ D+ STNGTF++ K++
Sbjct: 17 EYHKNEVTIGRLPGN-DIILAKGNVSKYHSRIVAKDGKFIIVDMKSTNGTFVNGKKI--A 73
Query: 144 VVAVASPGSRITFGDTHL---AMFRVSKIDTVEAPSKTEESEEKGDSP 188
V P ++ GD L A+ + T + E +E+G+ P
Sbjct: 74 APQVLKPTDQVYIGDYILNVEALEDEGPVMTRAGQPEEEYYDEQGEEP 121
>gi|227494211|ref|ZP_03924527.1| FHA domain protein [Actinomyces coleocanis DSM 15436]
gi|226831945|gb|EEH64328.1| FHA domain protein [Actinomyces coleocanis DSM 15436]
Length = 162
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E+ + EV +GR P + +V+ + S HARI K GD + DL STNGT++D++R+ SG
Sbjct: 83 ELVNNEVVIGRSPA-STLVLDDSYASSRHARIFKDGDYWFIEDLGSTNGTYVDDERI-SG 140
Query: 144 V 144
V
Sbjct: 141 V 141
>gi|320104395|ref|YP_004179986.1| protein serine phosphatase with GAF(s) sensor(s) [Isosphaera
pallida ATCC 43644]
gi|319751677|gb|ADV63437.1| protein serine phosphatase with GAF(s) sensor(s) [Isosphaera
pallida ATCC 43644]
Length = 573
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS-----LLVTDLDSTNGTFIDE 137
E+ + +T+GR + D+V P +S HARI + + ++TDLDS+ GT +++
Sbjct: 27 IELRTNTITLGRNSKYCDLVFPAPNISRRHARIDRVIEPDGRVVFMLTDLDSSLGTQLND 86
Query: 138 KRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
+ LR G AV G I GD L S++D V ESE
Sbjct: 87 RVLR-GQSAVLRDGDEIQIGDVFLLFQAESRLDPVTRTDSLTESE 130
>gi|197120560|ref|YP_002132511.1| diguanylate cyclase [Anaeromyxobacter sp. K]
gi|196170409|gb|ACG71382.1| diguanylate cyclase [Anaeromyxobacter sp. K]
Length = 289
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 56 AAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI 115
AA L+ GDG +G +VP+ EV +GR P A + +P + VS HAR+
Sbjct: 18 AAGHCLVFVAGDG---ALGLRVPL-------DGEVVLGRDPSCA-VALPASDVSRRHARV 66
Query: 116 QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
GD LV DL STNGT+++ + + V +PG R+ G
Sbjct: 67 VPDGDGHLVLDLGSTNGTWVNGREV---AVHRLAPGDRVQVG 105
>gi|330834637|ref|YP_004409365.1| FHA domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329566776|gb|AEB94881.1| FHA domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 215
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 55 VAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHAR 114
+ E++ +Q + +S KVP+ FE+ + +++GR PE M IP + +S HA
Sbjct: 105 IVTEKFYIQFIATPVSSLNKTKVPL--DFEVFES-ISLGRSPENVIM-IPDSEISRRHAI 160
Query: 115 IQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ K+G SL + DL+STNGT++ + ++ V
Sbjct: 161 LYKEGSSLFIEDLNSTNGTYVYDGKMFQAV 190
>gi|220915271|ref|YP_002490575.1| diguanylate cyclase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953125|gb|ACL63509.1| diguanylate cyclase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 289
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 56 AAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI 115
AA L+ GDG +G +VP+ EV +GR P A + +P + VS HAR+
Sbjct: 18 AAGHCLVFVAGDG---ALGLRVPL-------DGEVVLGRDPSCA-VALPASDVSRRHARV 66
Query: 116 QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
GD LV DL STNGT+++ + + V +PG R+ G
Sbjct: 67 VPDGDGHLVLDLGSTNGTWVNGREV---AVHRLAPGDRVQVG 105
>gi|298252165|ref|ZP_06975968.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
gi|297546757|gb|EFH80625.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
Length = 813
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 78 PMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
P+ D + + VT+GRL E + +VI T+S HA I ++ DL S NGT ++E
Sbjct: 477 PLTDTYLSQTRVVTIGRL-EGSSLVINHNTISRRHAEISYANGQYVLRDLGSKNGTQVNE 535
Query: 138 KRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEE 183
+R+ + V +P +++ FG A+ ++ +D E+ +E ++
Sbjct: 536 QRVVPNSLTVIAPENQVQFGSVKFAL-KLQTVDPAESVLLNKEQKQ 580
>gi|332298166|ref|YP_004440088.1| FHA domain-containing protein [Treponema brennaborense DSM 12168]
gi|332181269|gb|AEE16957.1| FHA domain containing protein [Treponema brennaborense DSM 12168]
Length = 114
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 68 GDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
DT + + + + ++ + ++++GR PE +++I S HA IQK D+ + D
Sbjct: 20 ADTDKVSYLMFNNNKIKLVA-KISIGRAPEN-NIIIDNKLASRHHALIQKIKDAYFLKDE 77
Query: 128 DSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
+STNGTF++ +R+ S + G +IT G+ +L +
Sbjct: 78 NSTNGTFLNGRRIPSDKYVKLNSGDKITIGNANLII 113
>gi|307104379|gb|EFN52633.1| hypothetical protein CHLNCDRAFT_138731 [Chlorella variabilis]
Length = 705
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 60 WLLQPVGDGDTS-----HIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHAR 114
W+L PV DG ++ H+ F+ + I+ VTVG DMV+ TVS HAR
Sbjct: 560 WVLTPVTDGSSASPEALHLEFEAAKHQSPVISREGVTVGT-GAGCDMVLTAPTVSEQHAR 618
Query: 115 I-QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG-------DTHLAMFRV 166
+ Q + VTDLDS GT+++ +RL + V P ++FG D + MF
Sbjct: 619 LHQCEAGDYHVTDLDSQLGTWVNSRRLPARVPQRLRPDDVVSFGAPGQGSLDFKVCMFHN 678
Query: 167 SKIDT 171
S +++
Sbjct: 679 SLLES 683
>gi|433636430|ref|YP_007270057.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140070017]
gi|432168023|emb|CCK65545.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140070017]
Length = 381
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GRLP R DMV+P VS HA I GDS ++TDL S NG ++ +R+
Sbjct: 297 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGDSFMITDLRSVNGVYVRGRRI--ATT 354
Query: 146 AVASPGSRITFGDTHL 161
A + G I GD L
Sbjct: 355 ATLNDGDHIRIGDHEL 370
>gi|383453251|ref|YP_005367240.1| sigma-54 dependent transcription regulator [Corallococcus
coralloides DSM 2259]
gi|380732048|gb|AFE08050.1| sigma-54 dependent transcription regulator [Corallococcus
coralloides DSM 2259]
Length = 454
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ +A+ ++ VG+ + D+VI TVS H ++++GD LV DL STNGTF+D ++R
Sbjct: 43 YPLATEDLRVGKSTDN-DVVIDHPTVSRNHLVVRRQGDRFLVQDLGSTNGTFLDGAQVRE 101
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG+ + GD L
Sbjct: 102 ---AYLRPGALLEVGDVRL 117
>gi|433643525|ref|YP_007289284.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140070008]
gi|432160073|emb|CCK57389.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140070008]
Length = 381
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GRLP R DMV+P VS HA I GDS ++TDL S NG ++ +R+
Sbjct: 297 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGDSFMITDLRSVNGVYVRGRRI--ATT 354
Query: 146 AVASPGSRITFGDTHL 161
A + G I GD L
Sbjct: 355 ATLNDGDHIRIGDHEL 370
>gi|308813159|ref|XP_003083886.1| unnamed protein product [Ostreococcus tauri]
gi|116055768|emb|CAL57853.1| unnamed protein product [Ostreococcus tauri]
Length = 366
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 37 IRAS-EADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRL 95
+RAS EA + T V W + D + G K+P P + T++ +GR
Sbjct: 179 LRASREAGGAAVAAFTGGQVGEGTWTFTQIIDEEDGSKGKKLP-PLKIKRGETKI-IGRS 236
Query: 96 PE-RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRI 154
D+V+P+ VS +HA + +G+ L + DL STNGT+++ +R G+ +
Sbjct: 237 KGPGVDLVVPLNCVSSVHAELITEGNKLYIQDLGSTNGTYVEGFEVRKDKKFRIFNGAEV 296
Query: 155 TFGDTHLAMFRVSKIDTVEAPSKTEESE 182
FG + + +K A +K E +
Sbjct: 297 RFGAENFNGEQYAKYKATLAGAKELEKD 324
>gi|146304255|ref|YP_001191571.1| FHA domain-containing protein [Metallosphaera sedula DSM 5348]
gi|145702505|gb|ABP95647.1| FHA domain containing protein [Metallosphaera sedula DSM 5348]
Length = 218
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 6/66 (9%)
Query: 76 KVPMP-DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
KVP+ D FE +++GR PE ++IP + +S HA + K+GD+L + DL+STNGT+
Sbjct: 129 KVPLDFDVFE----NISLGRSPENV-LMIPDSEISRRHAILSKEGDTLYIEDLNSTNGTY 183
Query: 135 IDEKRL 140
I + ++
Sbjct: 184 IYDGKV 189
>gi|56476346|ref|YP_157935.1| metal-dependent phosphohydrolase [Aromatoleum aromaticum EbN1]
gi|56312389|emb|CAI07034.1| putative metal-dependent phosphohydrolase, possibly cGMP-dependent
3',5'-cyclic phosphodiesterase (EC 3.1.4.17)
[Aromatoleum aromaticum EbN1]
Length = 680
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 89 EVTVGR-----LPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
EV +GR L E + IP T+S HAR+ G + DL S NGTF+ KRLR G
Sbjct: 71 EVVIGRDPQDSLAEGRFLCIPEHTISRRHARVCLNGGEYFIEDLHSFNGTFVLGKRLRPG 130
Query: 144 VVAVASPGSRITFGDTHLAM 163
V G ++ T LA
Sbjct: 131 VWHPLHDGDELSISSTPLAF 150
>gi|304316128|ref|YP_003851273.1| FHA domain containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654304|ref|YP_007298012.1| FHA domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777630|gb|ADL68189.1| FHA domain containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292493|gb|AGB18315.1| FHA domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 133
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ T+GR + D+V+ VS HA I+KKG ++ DL+STNGT+++ KR+
Sbjct: 56 NLFEVT----TIGR-ADDCDIVVENPYVSSKHAMIRKKGKKFVIQDLNSTNGTYVNGKRV 110
Query: 141 RSGVVAVASPGSRITFGD 158
++ +A I FG+
Sbjct: 111 KN--IARIKNNDVIKFGN 126
>gi|262196650|ref|YP_003267859.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262079997|gb|ACY15966.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 694
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
E +EVT+GR+ + D+++P VS HARI K ++ DL STNGT+++ +++ S
Sbjct: 16 LEFDKSEVTIGRV-QGNDVILPKGNVSKRHARIVLKDGKFIIVDLKSTNGTYVNGRKITS 74
Query: 143 GVVAVASPGSRITFGD 158
+V S +I GD
Sbjct: 75 PLVVKES--DKIYIGD 88
>gi|428781393|ref|YP_007173179.1| multidrug ABC transporter ATPase [Dactylococcopsis salina PCC 8305]
gi|428695672|gb|AFZ51822.1| ABC-type multidrug transport system, ATPase component
[Dactylococcopsis salina PCC 8305]
Length = 919
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
+E+ +GR P+ D VI +VS H RIQK+ +S + DL+STNGT+++ + + V
Sbjct: 146 SELKIGRDPQN-DQVIAHPSVSRFHGRIQKEDESFYIYDLNSTNGTYVNGRAIHKK--RV 202
Query: 148 ASPGSRITFG 157
PG I+ G
Sbjct: 203 LKPGDLISIG 212
>gi|22300013|ref|NP_683260.1| hypothetical protein tlr2471 [Thermosynechococcus elongatus BP-1]
gi|22296198|dbj|BAC10022.1| tlr2471 [Thermosynechococcus elongatus BP-1]
Length = 318
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 99 ADMVIPVATVSGLHARIQKKGDS-LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
D+V+P S H RI+++GD +TDL S NGTF+ KR+++ + G RIT G
Sbjct: 70 CDIVLPDRWCSRHHIRIERQGDHRYYLTDLKSMNGTFVGNKRIQAPY--ILRHGDRITLG 127
Query: 158 DTHLAMFRVSKIDTVEAPS 176
++ L ID + PS
Sbjct: 128 ESEL-----EYIDLRDVPS 141
>gi|225572868|ref|ZP_03781623.1| hypothetical protein RUMHYD_01059 [Blautia hydrogenotrophica DSM
10507]
gi|225039794|gb|EEG50040.1| FHA domain protein [Blautia hydrogenotrophica DSM 10507]
Length = 463
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ VG+L D+V+P TVS +HA+I+K + DL+S NGTF++ + L SG
Sbjct: 388 LIVGKLKTAVDVVLPYPTVSRVHAKIRKIQGKFYLMDLNSRNGTFVNGRVLESGEEYELR 447
Query: 150 PGSRITFGD 158
+ F D
Sbjct: 448 DQDEVQFAD 456
>gi|297537702|ref|YP_003673471.1| FHA domain-containing protein [Methylotenera versatilis 301]
gi|297257049|gb|ADI28894.1| FHA domain containing protein [Methylotenera versatilis 301]
Length = 244
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ F + +T+GR P D+ I VSG HA I KKGD + D +STNGT ++ K +
Sbjct: 14 NEFLLDKERITIGRRPTN-DIHIDNLAVSGEHAVILKKGDDFYIEDKNSTNGTEVNAKLV 72
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRVSKI 169
+S ++ G I+FG L +K+
Sbjct: 73 KSYLL---QSGDLISFGKHQLKFINDAKL 98
>gi|84497150|ref|ZP_00995972.1| putative membrane protein [Janibacter sp. HTCC2649]
gi|84382038|gb|EAP97920.1| putative membrane protein [Janibacter sp. HTCC2649]
Length = 181
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
VGR PE A +V+ SG HARI K + +V DL STNGTFI + RL + A G
Sbjct: 111 VGRSPESA-LVLEDDFASGRHARIYKGPEGWMVEDLGSTNGTFIGQLRLTTPTPVTA--G 167
Query: 152 SRITFGDTHLAMFR 165
S I FG T + + R
Sbjct: 168 SEIRFGTTVVELRR 181
>gi|320160813|ref|YP_004174037.1| hypothetical protein ANT_14090 [Anaerolinea thermophila UNI-1]
gi|319994666|dbj|BAJ63437.1| hypothetical protein ANT_14090 [Anaerolinea thermophila UNI-1]
Length = 217
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 73 IGFKVPM---PDA---FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTD 126
+G+++ M P A F + TE+++GR D+V+ VS HAR+ +G++ ++ D
Sbjct: 3 VGYQLIMRSGPQAGGVFPLTKTEISLGR-DLTNDLVVSDPEVSRHHARLYLQGNTYVLED 61
Query: 127 LDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTV------EAPSKTEE 180
L STNGTF++ RL +G + PG I+ G+ + ++ V D P+ E
Sbjct: 62 LGSTNGTFVNGIRL-TGPYPL-RPGESISLGERVVFLYEVVDEDATVVTPASRIPAGGEL 119
Query: 181 SEEKGDSPPLSSAKS 195
+ G SP + A+S
Sbjct: 120 YPQVGVSPSVGKAQS 134
>gi|108862122|gb|ABA95711.2| FHA domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 120
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEV 90
ERW+L+P GDGD HIG++V P F+IAS
Sbjct: 87 ERWVLEPAGDGDWRHIGYRVARPGGFQIASVSC 119
>gi|405375771|ref|ZP_11029793.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Chondromyces apiculatus DSM 436]
gi|397085936|gb|EJJ17094.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Myxococcus sp. (contaminant ex DSM 436)]
Length = 597
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E EVT+GRLP D+++ VS H+RI K ++ D+ STNGTF++ K++
Sbjct: 17 EYHKNEVTIGRLPGN-DIILAKGNVSKYHSRIVAKDGKFIIVDMKSTNGTFVNGKKI--A 73
Query: 144 VVAVASPGSRITFGD 158
V P ++ GD
Sbjct: 74 APQVLKPTDQVYIGD 88
>gi|372269077|ref|ZP_09505125.1| FHA domain-containing protein [Alteromonas sp. S89]
Length = 340
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
TVGR AD I + +SG+HA IQ G ++ D+ S NGT+++ ++L
Sbjct: 20 TVGRRQGVADTRITLPEISGIHAAIQWTGSHWIIRDV-SRNGTWVNGQQLIPAKNQQLYL 78
Query: 151 GSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPL 190
G +ITFG A +RV +D P E G++ PL
Sbjct: 79 GDKITFGRASNAEWRVENLD---PPENLLIDLESGEATPL 115
>gi|163847549|ref|YP_001635593.1| forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
gi|163668838|gb|ABY35204.1| Forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
Length = 238
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 22/129 (17%)
Query: 37 IRASEADSSTTTTTTSTDVAAER----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTV 92
+R +++D T T +D A R + L +G+ P A IA+T VT+
Sbjct: 120 MRDNQSDQPTMTMIMQSDRAPGRSSGAFFLLQIGNA-----------PQALPIATTTVTI 168
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----EKRLRSGVVAV 147
GR + D+++ VS HA+++ + +TDL STNGTF++ E+ LR G V V
Sbjct: 169 GRGLDN-DIILEDTRVSRKHAQLRYRQRRFWLTDLGSTNGTFVNGERISERALRDGDV-V 226
Query: 148 ASPGSRITF 156
+ G +TF
Sbjct: 227 SLGGLELTF 235
>gi|162448566|ref|YP_001610933.1| FHA domain-containing protein [Sorangium cellulosum So ce56]
gi|161159148|emb|CAN90453.1| FHA domain protein [Sorangium cellulosum So ce56]
Length = 367
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
+AF + T + +GR ER D++ P VSGLH +I +G L +TDL S+NGTF+
Sbjct: 289 NAFPVPDTGLHLGR--ERGDILFPEDGYVSGLHCQISLQGGRLFLTDLGSSNGTFL 342
>gi|266621089|ref|ZP_06114024.1| putative FHA domain protein [Clostridium hathewayi DSM 13479]
gi|288867245|gb|EFC99543.1| putative FHA domain protein [Clostridium hathewayi DSM 13479]
Length = 481
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+PD I+ +G+ AD V+ TVS LHA+I ++G+ +TDL+STNGT + +
Sbjct: 397 VPDII-ISYVPFLIGKQEGLADYVLSRDTVSRLHAKIDREGEEYRITDLNSTNGTMVGGR 455
Query: 139 RLRSGVVAVASPGSRITFGDT 159
L + A PG + +
Sbjct: 456 LLETNETAPLLPGEEVYIANV 476
>gi|83649472|ref|YP_437907.1| FHA domain-containing protein [Hahella chejuensis KCTC 2396]
gi|83637515|gb|ABC33482.1| FOG: FHA domain [Hahella chejuensis KCTC 2396]
Length = 297
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
V +GR E+ D+ +PV+ +S HA++ G+ +LV DL STNGT+++ +R+ G A
Sbjct: 133 VIIGR-DEQCDITVPVSHLSRQHAQLTVAGNYMLVKDLGSTNGTYLNGERITQG---RAK 188
Query: 150 PGSRITF 156
G R+ F
Sbjct: 189 RGDRLRF 195
>gi|302873280|ref|YP_003841913.1| FHA domain-containing protein [Clostridium cellulovorans 743B]
gi|307688553|ref|ZP_07630999.1| FHA domain containing protein [Clostridium cellulovorans 743B]
gi|302576137|gb|ADL50149.1| FHA domain containing protein [Clostridium cellulovorans 743B]
Length = 149
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S ++ +GR + D+++ VSG HAR+ + D L+ DL STNGTF++ +RL
Sbjct: 72 MISGQIVIGR-KDNNDLILSSQYVSGTHARVFLQNDKYLIEDLQSTNGTFLNGERLEG-- 128
Query: 145 VAVASPGSRITFGDTHLAMFRV 166
A S G ++ G+ A F+V
Sbjct: 129 KAQLSIGDTVSIGE---AEFKV 147
>gi|262197792|ref|YP_003269001.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262081139|gb|ACY17108.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 387
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 82 AFEIASTEVTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
A+ + + VT+GR ER ++ P VSGLHAR+ +G S +++DL S+NGTFI
Sbjct: 309 AYPLLNESVTMGR--ERGEINFPEDGYVSGLHARLSNQGGSFVLSDLGSSNGTFI 361
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRL 140
E+ E +GR + ++ +S HA + +GDS++V DL S NG F+ +++ L
Sbjct: 198 ELREGENRIGR--DHGELFENDGYLSPTHAALVVQGDSMVVRDLGSLNGVFVKMSEDEEL 255
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSP 188
R PG I G L + DT+E P + E SP
Sbjct: 256 R--------PGQIIRLGQELL------RFDTIEPPQPLADGTEVMGSP 289
>gi|323357410|ref|YP_004223806.1| FHA domain [Microbacterium testaceum StLB037]
gi|323273781|dbj|BAJ73926.1| FOG: FHA domain [Microbacterium testaceum StLB037]
Length = 513
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 78 PMPDAFEIASTEVTVGRLPERADMVIPVA----------TVSGLHARIQKKGDSLLVTDL 127
P D E+ S+ V VGR P AD P A TVS HAR+Q +GD+ VTDL
Sbjct: 411 PSGDPVELTSSVVIVGRRPA-ADSAFPDAQLIAITDETRTVSKTHARLQLRGDTWFVTDL 469
Query: 128 DSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL---AMFRVSKID 170
DSTNG G A PG I G+ A R+S+ D
Sbjct: 470 DSTNGVLFATLM---GTEIEAPPGEEIEAGERFFLGDAEVRLSRRD 512
>gi|374633460|ref|ZP_09705825.1| FHA domain-containing protein [Metallosphaera yellowstonensis MK1]
gi|373523248|gb|EHP68168.1| FHA domain-containing protein [Metallosphaera yellowstonensis MK1]
Length = 135
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
K +P FE+ T +++GR PE ++IP +S HA + ++GD+L + DL+STNGT++
Sbjct: 44 KTKVPLDFEVFET-ISLGRSPENV-LMIPDNEISRRHALLYREGDNLYIEDLNSTNGTYV 101
Query: 136 DEKRLRSGV 144
+ ++ V
Sbjct: 102 YDGKVFQAV 110
>gi|325109951|ref|YP_004271019.1| protein serine/threonine phosphatase with GAF(s) sensor(s)
[Planctomyces brasiliensis DSM 5305]
gi|324970219|gb|ADY60997.1| protein serine/threonine phosphatase with GAF(s) sensor(s)
[Planctomyces brasiliensis DSM 5305]
Length = 558
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
+I E +GRLPE D+ + VS HA++ ++G+S L+ DL S NGTF++ KR+ G
Sbjct: 16 DITQPETVLGRLPE-CDVQLDSNMVSRRHAKLCQQGESYLIEDLGSGNGTFVNGKRIE-G 73
Query: 144 VVAVASPGSRITFGDTHLAMFRVSKIDTVEAPS 176
A+ G R+ G L + ++ APS
Sbjct: 74 QTALKH-GDRLKLGPILL------RFESASAPS 99
>gi|433632431|ref|YP_007266059.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140070010]
gi|432164024|emb|CCK61456.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140070010]
Length = 381
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GRLP R DMV+P VS HA I G+S ++TDL S NG ++ +R+
Sbjct: 297 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGESFMITDLRSVNGVYVRGRRI--ATT 354
Query: 146 AVASPGSRITFGDTHL 161
A + G I GD L
Sbjct: 355 ATLNDGDHIRIGDHEL 370
>gi|323486503|ref|ZP_08091826.1| hypothetical protein HMPREF9474_03577 [Clostridium symbiosum
WAL-14163]
gi|323400206|gb|EGA92581.1| hypothetical protein HMPREF9474_03577 [Clostridium symbiosum
WAL-14163]
Length = 486
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ EI +G+ PE AD I +TVS LH R+ K+ ++TDL+STNGT + +L
Sbjct: 398 ENIEITYVPFVIGKHPELADFCIRHSTVSRLHLRVDKREGVYIITDLNSTNGTSVGGYKL 457
Query: 141 RSG 143
++
Sbjct: 458 QAN 460
>gi|306969428|ref|ZP_07482089.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu009]
gi|308353035|gb|EFP41886.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu009]
Length = 357
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GRLP R DMV+P VS HA I G+S ++TDL S NG ++ +R+
Sbjct: 273 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGESFMITDLRSVNGVYVRGRRI--ATT 330
Query: 146 AVASPGSRITFGDTHL 161
A + G I GD L
Sbjct: 331 ATLNDGDHIRIGDHEL 346
>gi|323694356|ref|ZP_08108529.1| hypothetical protein HMPREF9475_03393 [Clostridium symbiosum
WAL-14673]
gi|323501596|gb|EGB17485.1| hypothetical protein HMPREF9475_03393 [Clostridium symbiosum
WAL-14673]
Length = 486
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ EI +G+ PE AD I +TVS LH R+ K+ ++TDL+STNGT + +L
Sbjct: 398 ENIEITYVPFVIGKHPELADFCIRHSTVSRLHLRVDKREGVYIITDLNSTNGTSVGGYKL 457
Query: 141 RSG 143
++
Sbjct: 458 QAN 460
>gi|15842920|ref|NP_337957.1| AfsR/DnrI/RedD family transcriptional regulator [Mycobacterium
tuberculosis CDC1551]
gi|31794510|ref|NP_857003.1| transcriptional regulatory protein EmbR2 [Mycobacterium bovis
AF2122/97]
gi|121639253|ref|YP_979477.1| transcriptional regulatory protein embR2 [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224991750|ref|YP_002646439.1| transcriptional regulatory protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289576051|ref|ZP_06456278.1| transcriptional regulatory protein EmbR2 [Mycobacterium
tuberculosis K85]
gi|289755451|ref|ZP_06514829.1| transcriptional regulatory protein EmbR2 [Mycobacterium
tuberculosis EAS054]
gi|289759473|ref|ZP_06518851.1| transcriptional regulatory protein [Mycobacterium tuberculosis T85]
gi|306782380|ref|ZP_07420717.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu002]
gi|306790570|ref|ZP_07428892.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu004]
gi|306795093|ref|ZP_07433395.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu005]
gi|306809324|ref|ZP_07445992.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu007]
gi|339633337|ref|YP_004724979.1| hypothetical protein MAF_33410 [Mycobacterium africanum GM041182]
gi|340628311|ref|YP_004746763.1| putative transcriptional regulatory protein embr2 [Mycobacterium
canettii CIPT 140010059]
gi|378773114|ref|YP_005172847.1| putative transcriptional regulator [Mycobacterium bovis BCG str.
Mexico]
gi|385992569|ref|YP_005910867.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385996199|ref|YP_005914497.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|386000119|ref|YP_005918418.1| AfsR/DnrI/RedD family transcriptional regulator [Mycobacterium
tuberculosis CTRI-2]
gi|424803168|ref|ZP_18228599.1| hypothetical protein TBPG_00288 [Mycobacterium tuberculosis W-148]
gi|433628470|ref|YP_007262099.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140060008]
gi|449065435|ref|YP_007432518.1| hypothetical protein K60_034600 [Mycobacterium bovis BCG str. Korea
1168P]
gi|2909382|emb|CAA76293.1| regulator protein [Mycobacterium tuberculosis]
gi|13883254|gb|AAK47771.1| transcriptional regulator, AfsR/DnrI/RedD family [Mycobacterium
tuberculosis CDC1551]
gi|31620106|emb|CAD95463.1| POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN EMBR2 [Mycobacterium
bovis AF2122/97]
gi|121494901|emb|CAL73384.1| Possible transcriptional regulatory protein embR2 [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224774865|dbj|BAH27671.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|289540482|gb|EFD45060.1| transcriptional regulatory protein EmbR2 [Mycobacterium
tuberculosis K85]
gi|289696038|gb|EFD63467.1| transcriptional regulatory protein EmbR2 [Mycobacterium
tuberculosis EAS054]
gi|289715037|gb|EFD79049.1| transcriptional regulatory protein [Mycobacterium tuberculosis T85]
gi|308325128|gb|EFP13979.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu002]
gi|308333181|gb|EFP22032.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu004]
gi|308336639|gb|EFP25490.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu005]
gi|308344435|gb|EFP33286.1| putative FHA domain protein [Mycobacterium tuberculosis SUMu007]
gi|326902444|gb|EGE49377.1| hypothetical protein TBPG_00288 [Mycobacterium tuberculosis W-148]
gi|339296153|gb|AEJ48264.1| hypothetical protein CCDC5079_3074 [Mycobacterium tuberculosis
CCDC5079]
gi|339299762|gb|AEJ51872.1| hypothetical protein CCDC5180_3035 [Mycobacterium tuberculosis
CCDC5180]
gi|339332693|emb|CCC28411.1| unnamed protein product [Mycobacterium africanum GM041182]
gi|340006501|emb|CCC45684.1| putative transcriptional regulatory protein embr2 [Mycobacterium
canettii CIPT 140010059]
gi|341603278|emb|CCC65956.1| possible transcriptional regulatory protein embR2 [Mycobacterium
bovis BCG str. Moreau RDJ]
gi|344221166|gb|AEN01797.1| AfsR/DnrI/RedD family transcriptional regulator [Mycobacterium
tuberculosis CTRI-2]
gi|356595435|gb|AET20664.1| Putative transcriptional regulator [Mycobacterium bovis BCG str.
Mexico]
gi|432156076|emb|CCK53329.1| EmbR-like regulatory protein [Mycobacterium canettii CIPT
140060008]
gi|440582815|emb|CCG13218.1| DNA-binding transcriptional activator of the SARP family
[Mycobacterium tuberculosis 7199-99]
gi|449033943|gb|AGE69370.1| hypothetical protein K60_034600 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 381
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GRLP R DMV+P VS HA I G+S ++TDL S NG ++ +R+
Sbjct: 297 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGESFMITDLRSVNGVYVRGRRI--ATT 354
Query: 146 AVASPGSRITFGDTHL 161
A + G I GD L
Sbjct: 355 ATLNDGDHIRIGDHEL 370
>gi|355629056|ref|ZP_09050193.1| hypothetical protein HMPREF1020_04272 [Clostridium sp. 7_3_54FAA]
gi|354819379|gb|EHF03824.1| hypothetical protein HMPREF1020_04272 [Clostridium sp. 7_3_54FAA]
Length = 482
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
+ EI +G+ PE AD I +TVS LH R+ K+ ++TDL+STNGT
Sbjct: 394 ENIEITYVPFVIGKHPELADFCIRHSTVSRLHLRVDKREGVYIITDLNSTNGT 446
>gi|254365948|ref|ZP_04981993.1| hypothetical protein TBHG_03263 [Mycobacterium tuberculosis str.
Haarlem]
gi|422814417|ref|ZP_16862782.1| hypothetical protein TMMG_02477 [Mycobacterium tuberculosis
CDC1551A]
gi|424948961|ref|ZP_18364657.1| AfsR/DnrI/RedD family transcriptional regulator [Mycobacterium
tuberculosis NCGM2209]
gi|134151461|gb|EBA43506.1| hypothetical protein TBHG_03263 [Mycobacterium tuberculosis str.
Haarlem]
gi|323718198|gb|EGB27380.1| hypothetical protein TMMG_02477 [Mycobacterium tuberculosis
CDC1551A]
gi|358233476|dbj|GAA46968.1| AfsR/DnrI/RedD family transcriptional regulator [Mycobacterium
tuberculosis NCGM2209]
Length = 382
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GRLP R DMV+P VS HA I G+S ++TDL S NG ++ +R+
Sbjct: 298 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGESFMITDLRSVNGVYVRGRRI--ATT 355
Query: 146 AVASPGSRITFGDTHL 161
A + G I GD L
Sbjct: 356 ATLNDGDHIRIGDHEL 371
>gi|407709726|ref|YP_006793590.1| forkhead-associated protein [Burkholderia phenoliruptrix BR3459a]
gi|407238409|gb|AFT88607.1| forkhead-associated protein [Burkholderia phenoliruptrix BR3459a]
Length = 869
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG+ L V DL STNGTF+ KRL + +A G + FG H ++
Sbjct: 180 VNYISRRHAHIYLKGEQLYVEDLGSTNGTFVGGKRLDESALPLAD-GDVVAFGGDHF-VY 237
Query: 165 RVSKIDTVEAPSKTE 179
RV T++ P + E
Sbjct: 238 RV----TLQTPPEVE 248
>gi|406912442|gb|EKD52054.1| FHA/GGDEF protein [uncultured bacterium]
Length = 299
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 57 AERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ 116
AE +L+ G HIG + +A E+ GR P+ D+ I T+S H RI+
Sbjct: 20 AEPYLIIVAG----MHIG------KTYSLAEGEIIAGRSPD-CDIWIEDNTISRKHFRIR 68
Query: 117 KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRIT 155
K + D++STNGTF++ KRL V AS +I+
Sbjct: 69 KSEGQCTIQDMNSTNGTFVNSKRLTKPVTLQASDKIQIS 107
>gi|291303907|ref|YP_003515185.1| FHA domain-containing protein [Stackebrandtia nassauensis DSM
44728]
gi|290573127|gb|ADD46092.1| FHA domain containing protein [Stackebrandtia nassauensis DSM
44728]
Length = 246
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ I T+GR E+A + +P +S +H RI G +LVTDL STNGT ++ +R+ +
Sbjct: 167 YAITMGSTTIGR-GEQAQIRLPDVGISRVHVRIDFDGGQVLVTDLGSTNGTLVNGQRIST 225
Query: 143 GVVAVASPGSRITFGDTHLAM 163
VA+ PG I G T L +
Sbjct: 226 --VAL-QPGDMIQLGTTSLTL 243
>gi|323528888|ref|YP_004231040.1| Forkhead-associated protein [Burkholderia sp. CCGE1001]
gi|323385890|gb|ADX57980.1| Forkhead-associated protein [Burkholderia sp. CCGE1001]
Length = 869
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG+ L V DL STNGTF+ KRL + +A G + FG H ++
Sbjct: 180 VNYISRRHAHIYLKGEQLYVEDLGSTNGTFVGGKRLDESALPLAD-GDVVAFGGDHF-VY 237
Query: 165 RVSKIDTVEAPSKTE 179
RV T++ P + E
Sbjct: 238 RV----TLQTPPEVE 248
>gi|412985759|emb|CCO16959.1| predicted protein [Bathycoccus prasinos]
Length = 390
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 36 AIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMP--DAFEIASTEVTVG 93
AI+ + + +TD + +W L P +G K+ + D F +G
Sbjct: 209 AIKERVSSKAAAALMEATDTSTAKWTLTPDSSTTKKRLG-KINLKNGDVF-------IIG 260
Query: 94 RLPERA-DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
R D+ +P+ VSG+H +++ + + L VTDL STNGT++D +LR
Sbjct: 261 REKGNGVDVSVPLPCVSGVHCQLEMERNKLYVTDLGSTNGTYVDGFQLR 309
>gi|254785245|ref|YP_003072673.1| FHA domain-containing protein [Teredinibacter turnerae T7901]
gi|237686227|gb|ACR13491.1| FHA domain protein [Teredinibacter turnerae T7901]
Length = 119
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD-------SLLVTDLDSTNGTFI 135
FE+AST+VT+GR PE + I + VS HARI +K + + D STNGT+I
Sbjct: 16 FEVASTDVTLGRHPENT-VTIDDSAVSSHHARITQKANEYFPEYIEYFIEDCGSTNGTYI 74
Query: 136 DEKRLR 141
++ R++
Sbjct: 75 NDLRIQ 80
>gi|184201707|ref|YP_001855914.1| hypothetical protein KRH_20610 [Kocuria rhizophila DC2201]
gi|183581937|dbj|BAG30408.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 273
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ F + + V+VGR E AD+ + VS H I+++G + L DL STNG+++D +R+
Sbjct: 185 ERFSLNADSVSVGRSAE-ADITVEDTGVSRKHLEIRRQGPTFLAVDLGSTNGSYVDGQRI 243
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRV 166
+ V GS IT G T L +FR+
Sbjct: 244 QGRAQLV--DGSVITMGRTRL-VFRL 266
>gi|222525399|ref|YP_002569870.1| FHA domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|222449278|gb|ACM53544.1| FHA domain containing protein [Chloroflexus sp. Y-400-fl]
Length = 238
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 22/129 (17%)
Query: 37 IRASEADSSTTTTTTSTDVAAER----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTV 92
+R +++D T T +D A R + L +G+ P A IA+T VT+
Sbjct: 120 MRDNQSDQPTMTMIMQSDRAPGRSSGAFFLLQIGNA-----------PQALPIATTTVTI 168
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----EKRLRSGVVAV 147
GR + D+++ VS HA+++ + +TDL STNGTF++ E+ LR G V V
Sbjct: 169 GRGLDN-DIILEDTRVSRKHAQLRYRQRRFWLTDLVSTNGTFVNGERISERALRDGDV-V 226
Query: 148 ASPGSRITF 156
+ G +TF
Sbjct: 227 SLGGLELTF 235
>gi|392422136|ref|YP_006458740.1| FHA domain-containing protein [Pseudomonas stutzeri CCUG 29243]
gi|390984324|gb|AFM34317.1| FHA domain-containing protein [Pseudomonas stutzeri CCUG 29243]
Length = 283
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 25 RIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFE 84
+I++ LGA+ D + T ++ A RWLLQ V + H +
Sbjct: 75 QIRSGDRLRLGALELQIVDPAKAGTKLAS---APRWLLQVVKGENQGH---------KYH 122
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I + +T GR + ++ A +S HA KGD L V DL S NG ++ +++ +
Sbjct: 123 ITGS-MTFGR-SVKCELCFSDAELSRRHAEFYLKGDVLEVKDLASANGLLVNREKVTT-- 178
Query: 145 VAVASPGSRITFGDTHL 161
AV PG +I G+T L
Sbjct: 179 -AVLQPGDQIQLGNTTL 194
>gi|225572006|ref|ZP_03780870.1| hypothetical protein RUMHYD_00300 [Blautia hydrogenotrophica DSM
10507]
gi|225040539|gb|EEG50785.1| FHA domain protein [Blautia hydrogenotrophica DSM 10507]
Length = 121
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVT-DLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
D VIP VS H + + D L + DL STNGTFI+ RL+ PG +I+
Sbjct: 48 CDFVIPAIRVSRQHCLLTRMPDGLFIIEDLSSTNGTFINGIRLKEP--TPLYPGDQISLA 105
Query: 158 DTHLAMFRVSK 168
DTHL F+V +
Sbjct: 106 DTHLT-FQVDQ 115
>gi|308808972|ref|XP_003081796.1| unnamed protein product [Ostreococcus tauri]
gi|116060262|emb|CAL56321.1| unnamed protein product [Ostreococcus tauri]
Length = 610
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 101 MVIPVATVSGLHARIQKKGDS----LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF 156
++PV TVSG HA + + + V DL S GT I+ + LR G PG +TF
Sbjct: 26 FMLPVRTVSGKHAELSLGANEDEGRVFVKDLGSKFGTSINGRALRRGETYEIFPGDFVTF 85
Query: 157 GDTHLAMFRVSKIDTVEAPSKTEESEEK 184
GD HLA + + + P K + S+ K
Sbjct: 86 GDEHLARYEAVAVVKI-IPRKDDNSKPK 112
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 55 VAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPER--ADMVIPVATVSGLH 112
V AER LL PVG + P+ D E+ V +G +R AD+++ V H
Sbjct: 202 VTAERVLLAPVG--------WSGPVID-LELGE-RVVLGTSQKRGGADVILSSPGVDKSH 251
Query: 113 ARIQKKGDSLL-VTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVS 167
A + GD ++ V DL S+ GTF+ +++++G+ + G GD+ +F++S
Sbjct: 252 AAVTLAGDGVVYVEDLRSSGGTFVRGRQIKAGLQYSLAAGDEFMLGDSG-CVFQLS 306
>gi|355683177|ref|ZP_09062853.1| hypothetical protein HMPREF9469_05890 [Clostridium citroniae
WAL-17108]
gi|354810659|gb|EHE95299.1| hypothetical protein HMPREF9469_05890 [Clostridium citroniae
WAL-17108]
Length = 540
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D I+ +G+ AD V+ TVS H RI K G + VTDL+STNGT + K L
Sbjct: 457 DEIVISYYPFVIGKNKNLADYVLQKDTVSRFHLRIDKDGGTYTVTDLNSTNGTRVRGKLL 516
Query: 141 RSGVVAVASPGSRITFGD 158
+ AV G I D
Sbjct: 517 DANETAVIEVGDEIIIAD 534
>gi|269793899|ref|YP_003313354.1| FHA domain-containing protein [Sanguibacter keddieii DSM 10542]
gi|269096084|gb|ACZ20520.1| FHA domain-containing protein [Sanguibacter keddieii DSM 10542]
Length = 502
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 74 GFKVPMPDAFEIASTEVTVGR-----LPERADMVIPVATVSGLHARIQKKGDSLLVTDLD 128
G VP+ A I V V R LP +V P +S HA++ G+ +LVTDL+
Sbjct: 399 GLLVPLDRAVLIGRAPV-VSRVAARDLPRLVTVVSPNQDISRTHAQVHTVGEDVLVTDLN 457
Query: 129 STNGTFIDE-----KRLRSGVVAVASPGSRITFGD 158
STNG + E +RLRSG +PG+ + GD
Sbjct: 458 STNGMLLTEVGQAPRRLRSGEPTPITPGALVDLGD 492
>gi|442770725|gb|AGC71432.1| response regulator of zinc sigma-54-dependent two-component system
[uncultured bacterium A1Q1_fos_1070]
Length = 502
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D+V+ TVS H RI++ L+ DL STNGT+++ R+R A SPG I+ G T
Sbjct: 64 DLVLHDETVSRAHCRIEQDELGYLIRDLGSTNGTYVNAVRIRE---AYLSPGCTISVGQT 120
Query: 160 HLAMF 164
+ +
Sbjct: 121 DMQFY 125
>gi|115379231|ref|ZP_01466347.1| Flp pilus assembly protein TadA [Stigmatella aurantiaca DW4/3-1]
gi|310822226|ref|YP_003954584.1| type II secretion system protein e [Stigmatella aurantiaca DW4/3-1]
gi|115363763|gb|EAU62882.1| Flp pilus assembly protein TadA [Stigmatella aurantiaca DW4/3-1]
gi|309395298|gb|ADO72757.1| Type II secretion system protein E [Stigmatella aurantiaca DW4/3-1]
Length = 598
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ E E+++GRL + D+V+ VS H+RI K +V D+ STNGTF++ K++
Sbjct: 14 EQIEFEKNEISIGRLGDN-DIVLAKGNVSKYHSRIVSKDGKFIVVDMKSTNGTFVNGKKI 72
Query: 141 RSGVVAVASPGSRITFGD 158
+ + V P ++ GD
Sbjct: 73 AAPM--VLKPTDKVYIGD 88
>gi|442318647|ref|YP_007358668.1| FHA domain/GGDEF domain-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441486289|gb|AGC42984.1| FHA domain/GGDEF domain-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 306
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 22/141 (15%)
Query: 28 AKKHRNLGAIRASEADSSTTTTTTSTDVAAER----WLLQPVGDGDTSHIGFKVPMPDAF 83
A ++R + A RA D + T ++ D+ ++R L+Q G +G K + D
Sbjct: 2 ASENRVVLASRAMSGDETRVTKISALDLRSQRSTECCLVQIHG----PELGKKYLIDD-- 55
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR---- 139
+E+T+GR + +V+ + VS HAR+ +G +LV DL STNGT+++++
Sbjct: 56 ----SELTIGR-DQHNHIVVDLDNVSRRHARVLGRGGKMLVEDLGSTNGTYLNDQEVLQA 110
Query: 140 --LRSGVVAVASPGSRITFGD 158
LRSG + + GS F D
Sbjct: 111 QPLRSGDL-IKVGGSIFKFLD 130
>gi|223938277|ref|ZP_03630172.1| FHA domain containing protein [bacterium Ellin514]
gi|223892991|gb|EEF59457.1| FHA domain containing protein [bacterium Ellin514]
Length = 180
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+F++ + T+GR+ + A I +VS H I KG+ ++V DL+STNGTFI+ K++
Sbjct: 15 SFDLKVDKTTIGRVEDNA-FQIAQPSVSSHHCEILLKGNEVVVVDLNSTNGTFINGKQIA 73
Query: 142 SGVVAVASPGSRITFGDTHLAM 163
AV PG + G L +
Sbjct: 74 G--EAVLKPGQTLRLGQVDLRL 93
>gi|417305988|ref|ZP_12092924.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
baltica WH47]
gi|327537710|gb|EGF24418.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
baltica WH47]
Length = 617
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F++ E+ VGR P+ D+V+ VS HA+I KKG+ V D S NGTF++ + L
Sbjct: 16 FQLDRDEMQVGRHPD-CDIVVDAGAVSRYHAKITKKGNEFAVEDAGSRNGTFVNGQLLSR 74
Query: 143 GVVAVASPGSRI 154
V S G RI
Sbjct: 75 P--HVLSEGDRI 84
>gi|421611476|ref|ZP_16052616.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
baltica SH28]
gi|408497719|gb|EKK02238.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
baltica SH28]
Length = 617
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F++ E+ VGR P+ D+V+ VS HA+I KKG+ V D S NGTF++ + L
Sbjct: 16 FQLDRDEMQVGRHPD-CDIVVDAGAVSRYHAKITKKGNEFAVEDAGSRNGTFVNGQLLSR 74
Query: 143 GVVAVASPGSRI 154
V S G RI
Sbjct: 75 P--HVLSEGDRI 84
>gi|440713305|ref|ZP_20893906.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
baltica SWK14]
gi|436441771|gb|ELP34963.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
baltica SWK14]
Length = 617
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F++ E+ VGR P+ D+V+ VS HA+I KKG+ V D S NGTF++ + L
Sbjct: 16 FQLDRDEMQVGRHPD-CDIVVDAGAVSRYHAKITKKGNEFAVEDAGSRNGTFVNGQLLSR 74
Query: 143 GVVAVASPGSRI 154
V S G RI
Sbjct: 75 P--HVLSEGDRI 84
>gi|295107887|emb|CBL21840.1| FOG: FHA domain [Ruminococcus obeum A2-162]
Length = 486
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
+ +G++ AD VI + TVS +HA+I+K D ++DL+S NGT ++ + L++G
Sbjct: 411 MVIGKMENAADAVISLPTVSRIHAKIRKADDEYYLSDLNSRNGTSVNGRLLKTG 464
>gi|86156561|ref|YP_463346.1| diguanylate cyclase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773072|gb|ABC79909.1| diguanylate cyclase (GGDEF domain) [Anaeromyxobacter dehalogenans
2CP-C]
Length = 289
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 56 AAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI 115
AA L+ GDG +G +VP+ EV +GR P A + +P VS HAR+
Sbjct: 18 AAGHCLVFVAGDG---ALGLRVPL-------DGEVVLGRDPSCA-VSLPAGDVSRRHARV 66
Query: 116 QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
G+ LV DL STNGT+++ + + V +PG R+ G
Sbjct: 67 VPDGEGHLVLDLGSTNGTWVNGREV---AVHRLAPGDRVQVG 105
>gi|32474688|ref|NP_867682.1| regulatory protein [Rhodopirellula baltica SH 1]
gi|32445227|emb|CAD75229.1| conserved hypothetical protein-putative regulatory protein
[Rhodopirellula baltica SH 1]
Length = 634
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F++ E+ VGR P+ D+V+ VS HA+I KKG+ V D S NGTF++ + L
Sbjct: 33 FQLDRDEMQVGRHPD-CDIVVDAGAVSRYHAKITKKGNEFAVEDAGSRNGTFVNGQLLSR 91
Query: 143 GVVAVASPGSRI 154
V S G RI
Sbjct: 92 P--HVLSEGDRI 101
>gi|384109276|ref|ZP_10010156.1| hypothetical protein MSI_17210 [Treponema sp. JC4]
gi|383869153|gb|EID84772.1| hypothetical protein MSI_17210 [Treponema sp. JC4]
Length = 114
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++T+GR + D+V+ S HA IQK ++ + D+ STNGTFI+ R+ +
Sbjct: 40 KITIGRDTDN-DVVVDNKLASRHHAMIQKIKNAYFIKDMGSTNGTFINGVRIPNDKYVKM 98
Query: 149 SPGSRITFGDTHLAM 163
+PG +IT G+ L +
Sbjct: 99 NPGDKITIGNMSLVV 113
>gi|398015847|ref|XP_003861112.1| protein kinase, putative [Leishmania donovani]
gi|322499337|emb|CBZ34410.1| protein kinase, putative [Leishmania donovani]
Length = 543
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P D+V+P +VS LH + GD + V D +S NGTFI+ +R+ G +V P
Sbjct: 98 IGRDPSCCDLVLPSNSVSRLHCVLSVLGDDVFVHD-NSFNGTFINGRRVGRGRCSVLHPR 156
Query: 152 SRITF 156
++F
Sbjct: 157 DTLSF 161
>gi|339898314|ref|XP_003392535.1| putative protein kinase [Leishmania infantum JPCM5]
gi|321399507|emb|CBZ08703.1| putative protein kinase [Leishmania infantum JPCM5]
Length = 543
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P D+V+P +VS LH + GD + V D +S NGTFI+ +R+ G +V P
Sbjct: 98 IGRDPSCCDLVLPSNSVSRLHCVLSVLGDDVFVHD-NSFNGTFINGRRVGRGRCSVLHPR 156
Query: 152 SRITF 156
++F
Sbjct: 157 DTLSF 161
>gi|386772438|ref|ZP_10094816.1| FHA domain-containing protein [Brachybacterium paraconglomeratum
LC44]
Length = 175
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+ + ST + +GR PE +V+ S HAR+ ++ D +V DL STNGT + +R+
Sbjct: 92 SLTLGSTPILIGRAPE-CTLVLDDDYASNRHARVFQREDEWMVEDLGSTNGTLVSGRRIE 150
Query: 142 SGVVAVASPGSRITFGDTHLAMFR 165
V PG+++ G T + + R
Sbjct: 151 GAV--PFRPGAQVRIGRTEIELRR 172
>gi|401422694|ref|XP_003875834.1| putative protein kinase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492074|emb|CBZ27348.1| putative protein kinase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 543
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P D+V+P VS LH + GD + V D +S NGTFI+ +R+ G +V P
Sbjct: 98 IGRDPNCCDLVLPSNAVSRLHCVLSVLGDDVFVHD-NSFNGTFINGRRVGRGRCSVLHPR 156
Query: 152 SRITF 156
++F
Sbjct: 157 DTLSF 161
>gi|405372164|ref|ZP_11027428.1| FHA domain/GGDEF domain protein [Chondromyces apiculatus DSM 436]
gi|397088537|gb|EJJ19518.1| FHA domain/GGDEF domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 293
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 42 ADSSTTTTTTSTDVAAER----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPE 97
D + T ++ +V A R L+Q G +G K + DA E+T+GR +
Sbjct: 3 GDETRVTKISTLNVHAHRSTECCLVQIHG----PELGKKYLIEDA------ELTIGR-DQ 51
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR------LRSGVVAVASPG 151
+V+ + VS HARI +G +LV DL STNGTF++++ LRSG + V G
Sbjct: 52 HNHIVVDLDNVSRRHARILGRGGKMLVEDLGSTNGTFLNDQEVLQASPLRSGDL-VKVGG 110
Query: 152 SRITFGD 158
S F D
Sbjct: 111 SIFKFLD 117
>gi|366163508|ref|ZP_09463263.1| FHA domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 360
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 61 LLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD 120
++ + D D+S + + F+I +GR+ E +D VI + HA I +
Sbjct: 256 FMERILDTDSSQAE---TIAERFKIFKDNFIIGRISEYSDYVISSRVIGQRHALINLESG 312
Query: 121 SLLVTDLDSTNGTFIDEKRLR 141
+TDLDS NGTF++ +RL+
Sbjct: 313 RYFITDLDSRNGTFVNGQRLQ 333
>gi|15893697|ref|NP_347046.1| FHA domain-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337735619|ref|YP_004635066.1| FHA domain-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384457130|ref|YP_005669550.1| membrane protein, containing FHA domain [Clostridium acetobutylicum
EA 2018]
gi|15023258|gb|AAK78386.1|AE007555_6 Predicted membrane protein, containing FHA domain [Clostridium
acetobutylicum ATCC 824]
gi|325507819|gb|ADZ19455.1| membrane protein, containing FHA domain [Clostridium acetobutylicum
EA 2018]
gi|336290089|gb|AEI31223.1| FHA domain-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 516
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GRL D V + +HA I+K + DLDS NGTFI+++RL S + S
Sbjct: 442 IGRLTGSVDYVSDNRAIGKMHAEIRKINSEYYLMDLDSKNGTFINDRRLESNELYKISEN 501
Query: 152 SRITFGDTH 160
+ F +++
Sbjct: 502 DILKFANSY 510
>gi|220917216|ref|YP_002492520.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955070|gb|ACL65454.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 121
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDEKRLRSGVV 145
S +T+GR E+AD+ + S LHARI ++ D + +VTDL STNGTF++ R+RS V+
Sbjct: 34 SDGLTIGR-AEQADLPVDDRGASRLHARIARRPDGAWMVTDLGSTNGTFVNGVRIRSAVL 92
>gi|162452044|ref|YP_001614411.1| sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
gi|161162626|emb|CAN93931.1| Sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
Length = 566
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
V +GR P AD+ IP ++S HAR + +L+ DL STNGTF+ +R+ GV+
Sbjct: 108 VVIGRDPS-ADVAIPERSLSRRHARFTFQRGDVLIQDLGSTNGTFLSGQRVEHGVL---K 163
Query: 150 PGSRITFGD 158
PG + G+
Sbjct: 164 PGDEVMLGE 172
>gi|436835310|ref|YP_007320526.1| transmembrane ATP-binding protein ABC transporter [Fibrella
aestuarina BUZ 2]
gi|384066723|emb|CCG99933.1| transmembrane ATP-binding protein ABC transporter [Fibrella
aestuarina BUZ 2]
Length = 215
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
VTVGR + +VIP +VS HA++ + GD + D +S+NGTF++E R+ +
Sbjct: 19 VTVGR-SKNNHIVIPTLSVSEQHAQVMRLGDEFWLEDNNSSNGTFVNEFRITRRRL---Q 74
Query: 150 PGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEE 183
P +I G+ + R++K T T+E E
Sbjct: 75 PDDQIRMGNQLITYRRLTKAFTRNPDDYTKEFAE 108
>gi|333896373|ref|YP_004470247.1| FHA domain-containing protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111638|gb|AEF16575.1| FHA domain containing protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 133
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ T+GR + D+V+ VS HA I+KKG ++ DL+STNGTF++ +R+
Sbjct: 56 NLFEVT----TIGR-ADDCDIVVDNPYVSSKHAMIRKKGKKYIIQDLNSTNGTFVNGRRV 110
Query: 141 RSGV 144
++ V
Sbjct: 111 KNIV 114
>gi|390934350|ref|YP_006391855.1| FHA domain-containing protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569851|gb|AFK86256.1| FHA domain containing protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 133
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ T+GR + D+V+ VS HA I+KKG ++ DL+STNGTF++ +R+
Sbjct: 56 NLFEVT----TIGR-ADDCDIVVDNPYVSSKHAMIRKKGKKYIIQDLNSTNGTFVNGRRV 110
Query: 141 RS 142
++
Sbjct: 111 KN 112
>gi|126465451|ref|YP_001040560.1| FHA domain-containing protein [Staphylothermus marinus F1]
gi|126014274|gb|ABN69652.1| FHA domain containing protein [Staphylothermus marinus F1]
Length = 116
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 79 MPDA-FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
MP + + E +GR P D+VIP VS HARI + + DLDSTNGT +D
Sbjct: 24 MPQTEWSLEPGEYVLGRYPTN-DIVIPDPYVSRRHARIFYENGEWYIEDLDSTNGTIVDN 82
Query: 138 KRLRSGVVAVASPGSRITFGDTHLA 162
+ +R + S I G T L+
Sbjct: 83 EDIRGKGPKKINNNSEIVVGLTILS 107
>gi|328870377|gb|EGG18751.1| hypothetical protein DFA_02490 [Dictyostelium fasciculatum]
Length = 551
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKK--GDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
VGRLP D+++ ++S HA IQ + + LL+ DL+ST+GTFI++K+
Sbjct: 167 VGRLP-ICDIIMDNPSISRQHAVIQHRPEDNQLLLYDLNSTHGTFINKKKCNPNHYLAIK 225
Query: 150 PGSRITFGDT 159
G I FG++
Sbjct: 226 DGDFIKFGES 235
>gi|452825566|gb|EME32562.1| hypothetical protein Gasu_03340 [Galdieria sulphuraria]
Length = 350
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 75 FKVP--MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNG 132
F++P P F+ + T +T ++ +P VS LHA+I KG + DL S NG
Sbjct: 42 FEIPDWKPVVFKRSETSLTPSFHRRLGEICLPDPDVSRLHAKISFKGGRFEILDLGSLNG 101
Query: 133 TFIDEKRLRSGVVAVASP-----GSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
TF+++KRL V + P G ++ G T +F VS S+ E E+ D
Sbjct: 102 TFLNDKRLSPERVPLDEPVVLGNGDKLIIGQT---LFEVSIYKRFATISEEVEYEQGQD 157
>gi|410867812|ref|YP_006982423.1| ABC transporter, ATP-binding protein [Propionibacterium
acidipropionici ATCC 4875]
gi|410824453|gb|AFV91068.1| ABC transporter, ATP-binding protein [Propionibacterium
acidipropionici ATCC 4875]
Length = 912
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GR P A + I VS HA+++ GD V DL S+NGT+I+ +R+ G + P
Sbjct: 281 TIGRDPN-AAICIDDPLVSRAHAQLRPAGDGFDVVDLRSSNGTWINSQRITRGHLG---P 336
Query: 151 GSRITFGDTHLAMFRVSKIDTVEAPSKT 178
G R+T G T L + R ++ V P T
Sbjct: 337 GDRLTVGRTSL-VCRDGQLSLVAPPRTT 363
>gi|452910183|ref|ZP_21958865.1| FHA domain containing protein [Kocuria palustris PEL]
gi|452834801|gb|EME37600.1| FHA domain containing protein [Kocuria palustris PEL]
Length = 161
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
A ++ S VT+GR E D+ + SG HAR+ +G + DL STNGT+IDE+RL
Sbjct: 81 AHQLGSAPVTMGRSSE-CDIPLEDDYASGRHARLFPQGSRWFLEDLGSTNGTYIDEQRLT 139
Query: 142 SGV 144
V
Sbjct: 140 RAV 142
>gi|153811274|ref|ZP_01963942.1| hypothetical protein RUMOBE_01666 [Ruminococcus obeum ATCC 29174]
gi|149832772|gb|EDM87856.1| FHA domain protein [Ruminococcus obeum ATCC 29174]
Length = 302
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+G+L + +D+VI + TVS +HARI+K G++ + DL+S NGT ++ + L
Sbjct: 228 IGKLEQASDVVISLPTVSRVHARIRKTGENYYLADLNSRNGTSVNGRLL 276
>gi|124005400|ref|ZP_01690241.1| ABC transporter ATP-binding protein [Microscilla marina ATCC 23134]
gi|123989222|gb|EAY28800.1| ABC transporter ATP-binding protein [Microscilla marina ATCC 23134]
Length = 557
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+F + ++ +GR E D+ IP TVSG HA I + S +TDL STNGTF++ R+
Sbjct: 478 SFSLNKPKMFIGR-SEDNDITIPTQTVSGQHATITIEKGSFYLTDLGSTNGTFVNGSRVS 536
Query: 142 SGVVAVASPGSRITFGDTHLAM 163
++ G I G +L
Sbjct: 537 RTIL---KSGDMIKLGAANLKF 555
>gi|443682453|gb|ELT87041.1| hypothetical protein CAPTEDRAFT_113758 [Capitella teleta]
Length = 105
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRL 140
F++A TVG+ E D+VIP V HA I+ ++ D ++ DL++ GT++++ R+
Sbjct: 12 FQLAPKVTTVGK--EGCDLVIPTHGVDYQHAVIEFSQQEDCFVLQDLNTAQGTYVNDCRV 69
Query: 141 RSGVVAVASPGSRITFG 157
++ V +A PG I FG
Sbjct: 70 QNAAVRLA-PGDIIRFG 85
>gi|332796608|ref|YP_004458108.1| FHA domain-containing protein [Acidianus hospitalis W1]
gi|332694343|gb|AEE93810.1| FHA domain containing protein [Acidianus hospitalis W1]
Length = 233
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
K +P F++ + +++GR PE +VIP +S HA I +G L + DL+STNGT++
Sbjct: 142 KTKLPLEFDVFES-ISIGRSPENV-IVIPDPEISRRHAIISLEGGKLYIEDLNSTNGTYL 199
Query: 136 DEKRLRSGVVAVA--SPGSRITFGDTHL 161
+ +L V +PGS I G +
Sbjct: 200 YDGKLFQPVKGKQELAPGSIIKLGSNTM 227
>gi|379057706|ref|ZP_09848232.1| FHA domain-containing protein [Serinicoccus profundi MCCC 1A05965]
Length = 155
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
G VP+ DA V VGR PE +V+ SG H RI D+ DL STNGT
Sbjct: 73 GTSVPLHDA------GVLVGRNPE-CSLVLTDDYASGRHLRIYPGSDAWYADDLGSTNGT 125
Query: 134 FIDEKRLRSGVVAVASPGSRITFGDTHLAMFR 165
++ +R+ +G A PG++I G T L + R
Sbjct: 126 EVNGQRIGTG--ARLDPGAQIRIGQTVLELRR 155
>gi|338529907|ref|YP_004663241.1| FHA domain/GGDEF domain-containing protein [Myxococcus fulvus HW-1]
gi|337256003|gb|AEI62163.1| FHA domain/GGDEF domain-containing protein [Myxococcus fulvus HW-1]
Length = 293
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 42 ADSSTTTTTTSTDVAAER----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPE 97
D + T ++ +V A R L+Q G +G K + DA E+T+GR +
Sbjct: 3 GDETRVTKISTLNVHAHRSTECCLVQIHG----PELGKKYLIEDA------ELTIGR-DQ 51
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR------LRSGVVAVASPG 151
+V+ + VS HARI +G +LV DL STNGTF++++ LRSG + V G
Sbjct: 52 HNHIVVDLDNVSRRHARILGRGGKMLVEDLGSTNGTFLNDQEVLQASPLRSGDL-VKVGG 110
Query: 152 SRITFGD 158
S F D
Sbjct: 111 SIFKFLD 117
>gi|294993008|ref|ZP_06798699.1| putative transcriptional regulatory protein [Mycobacterium
tuberculosis 210]
Length = 105
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 92 VGRLPERA------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GRLP R DMV+P VS HA I G+S ++TDL S NG ++ +R+
Sbjct: 21 LGRLPLRIGRSKSNDMVLPDGKVSPYHAVIVNTGESFMITDLRSVNGVYVRGRRI--ATT 78
Query: 146 AVASPGSRITFGDTHL 161
A + G I GD L
Sbjct: 79 ATLNDGDHIRIGDHEL 94
>gi|389577332|ref|ZP_10167360.1| FHA domain-containing protein [Eubacterium cellulosolvens 6]
gi|389312817|gb|EIM57750.1| FHA domain-containing protein [Eubacterium cellulosolvens 6]
Length = 275
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 78 PMPDAFEIASTEVTVGRLPERAD-MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
P P FEI + +G P D ++ V TVS +HA I + V+DLDS NGTF++
Sbjct: 188 PAPVTFEIGHRKFRIGTDPVEVDGLITGVDTVSPVHALIGWNEINYYVSDLDSENGTFVN 247
Query: 137 EKRLRSGVVAVASPGSRITFGD 158
++R+ G+ + F D
Sbjct: 248 DQRIAPNTEVPIGEGTVLRFAD 269
>gi|428222968|ref|YP_007107138.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
gi|427996308|gb|AFY75003.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
Length = 336
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA-SPGSRITFGD 158
D+ +P + S HA +Q GD+ + DL S NG+F++ +R+ +V A PG RI+ G+
Sbjct: 41 DIALPDKSTSRYHALLQLLGDNFTLIDLGSRNGSFVNSQRV---IVPTALKPGDRISIGN 97
Query: 159 THLAMF 164
T++ F
Sbjct: 98 TYIDFF 103
>gi|68535104|ref|YP_249809.1| hypothetical protein jk0042 [Corynebacterium jeikeium K411]
gi|68262703|emb|CAI36191.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
Length = 165
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+V++GR + +V+ SG HAR+ ++G V DLDS NGT+I +RL V
Sbjct: 92 DVSIGR-SQSCTLVLEDDFASGTHARLIRRGSDWYVEDLDSRNGTWIGNERLDQPV--KL 148
Query: 149 SPGSRITFGDTHLAM 163
S G I G TH+ M
Sbjct: 149 SAGMEIRIGQTHVRM 163
>gi|220906968|ref|YP_002482279.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Cyanothece sp. PCC 7425]
gi|219863579|gb|ACL43918.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Cyanothece sp. PCC 7425]
Length = 1004
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GR + DMVI VS HARI++K ++L++TDL STNGTF++ + + + P
Sbjct: 251 TLGR-DSQNDMVIDHPMVSRCHARIERKKNALVLTDLGSTNGTFVNGQPITAEY--FLQP 307
Query: 151 GSRITFGDTHLAM 163
G I G +
Sbjct: 308 GDTINIGPSRFVF 320
>gi|383456918|ref|YP_005370907.1| type II/IV secretion system protein [Corallococcus coralloides DSM
2259]
gi|380732989|gb|AFE08991.1| type II/IV secretion system protein [Corallococcus coralloides DSM
2259]
Length = 584
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E E+T+GR+ D+V+ VS H+RI +K ++ D+ STNGTF++ K++
Sbjct: 17 EYPKNEITIGRIAGN-DIVLAKGNVSKTHSRIVEKDGRFIIVDMKSTNGTFVNGKKIAGP 75
Query: 144 VVAVASPGSRITFGDTHL 161
+ V P +++ GD L
Sbjct: 76 M--VLKPTDQVSIGDYIL 91
>gi|442320548|ref|YP_007360569.1| FHA domain- TPR-repeat-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441488190|gb|AGC44885.1| FHA domain- TPR-repeat-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 744
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 77 VPMPDA----FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNG 132
V +PD +E+A E+ +GR P D+++ VS HAR+ + ++ + DL S NG
Sbjct: 6 VRLPDGTENEYEVAG-ELKLGRQPG-CDILLTEGGVSRTHARVFSEAGTVFIEDLGSANG 63
Query: 133 TFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
TF+D +R+ G +P S + GD L +
Sbjct: 64 TFVDGERI--GEPTALTPQSEVVLGDYTLLL 92
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+V VGRLP A +V+ +VS HA ++ +LV DL S NGT ++ L V +
Sbjct: 185 KVLVGRLPP-AGIVLEDDSVSRKHAELEATSAGVLVRDLGSANGTLLNGDPLGPEPVELQ 243
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAPSK 177
+ G ++ FG L+ F + APS+
Sbjct: 244 A-GDQLQFGVVELS-FEAPQAADSAAPSR 270
>gi|385763707|gb|AFI78536.1| protein containing Forkhead-associated domains [uncultured
bacterium ws172H5]
Length = 120
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
VT+GR +D+ I +TVS HA+I D+ + DL+STNGTF++ KR++ ++ +
Sbjct: 23 VTIGR-ATNSDIHIKDSTVSSQHAKIVTYFDASYIEDLESTNGTFVNGKRVQKHIL---N 78
Query: 150 PGSRITFGDTH 160
PG I+ G TH
Sbjct: 79 PGDVISVG-TH 88
>gi|378551421|ref|ZP_09826637.1| hypothetical protein CCH26_15086, partial [Citricoccus sp. CH26A]
Length = 115
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 78 PMPD-AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
P+ D ++ T + +GR E AD+V+ VSG HAR+ +G + DL STNGTF+
Sbjct: 30 PLKDTVIQLNGTPLLLGR-AEDADLVLEDDYVSGRHARLFPQGSRWFLEDLGSTNGTFVS 88
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAM 163
L S VAV PG+ I G T L +
Sbjct: 89 GNPL-SRTVAV-EPGTPIRIGKTVLEL 113
>gi|440781331|ref|ZP_20959673.1| FHA-domain containing protein [Clostridium pasteurianum DSM 525]
gi|440220936|gb|ELP60142.1| FHA-domain containing protein [Clostridium pasteurianum DSM 525]
Length = 158
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EVT+GR E +V+ +SG HARI K ++ + DL+STNGT ++ ++++ V
Sbjct: 85 EVTIGR-KEDNTVVLAEEYISGHHARIYMKNNNYIFEDLNSTNGTIVNGQKIQEKV--YI 141
Query: 149 SPGSRITFG 157
PG +I G
Sbjct: 142 RPGDKIEIG 150
>gi|291561788|emb|CBL40588.1| FOG: FHA domain [butyrate-producing bacterium SS3/4]
Length = 487
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+G+ E +D + + +S +HA+I++ D ++TDL+STNGT ++ + L + PG
Sbjct: 415 IGKNREISDFCLNLPQISRIHAKIEEDKDGYMITDLNSTNGTSVNGRFLETNESIHIEPG 474
Query: 152 SRITFGD 158
++F D
Sbjct: 475 EMLSFAD 481
>gi|307595900|ref|YP_003902217.1| FHA domain-containing protein [Vulcanisaeta distributa DSM 14429]
gi|307551101|gb|ADN51166.1| FHA domain containing protein [Vulcanisaeta distributa DSM 14429]
Length = 134
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
E+T+GR PE ++IP TVS HA I G+ LL+ DL+STNGT++
Sbjct: 51 EITLGRSPENM-VIIPDPTVSRKHAVITMVGNELLIKDLNSTNGTYV 96
>gi|307718392|ref|YP_003873924.1| hypothetical protein STHERM_c06930 [Spirochaeta thermophila DSM
6192]
gi|306532117|gb|ADN01651.1| hypothetical protein STHERM_c06930 [Spirochaeta thermophila DSM
6192]
Length = 127
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
T++T+GR + D+VI S HA IQK + + DL+STNGT+++ R+
Sbjct: 52 TKITIGRASDN-DVVIDNKLASRYHAFIQKVKNEYFLKDLNSTNGTYLNGVRIPPDKYLK 110
Query: 148 ASPGSRITFGDTHLAMF 164
+PG +T G T+L +
Sbjct: 111 LAPGDVVTIGKTNLIVM 127
>gi|406835453|ref|ZP_11095047.1| stage II sporulation E family protein [Schlesneria paludicola DSM
18645]
Length = 565
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
FE+ E +GR PE + I VS HAR+ + G+ LV D+ S NGTF++ K++ +
Sbjct: 15 FELTDDETVIGRHPE-CKVQINSNMVSRKHARVTRSGNEFLVEDMGSGNGTFVNGKKIEN 73
Query: 143 GVV 145
V
Sbjct: 74 ATV 76
>gi|348677693|gb|EGZ17510.1| hypothetical protein PHYSODRAFT_560133 [Phytophthora sojae]
Length = 549
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKG-DS-----LLVTDL 127
G + +PD F+++ + VGR+ R D+ IP +SGLH I+ KG DS + + D
Sbjct: 22 GHRSSLPDHFDLSRSRHCVGRVANRCDLHIPKDFISGLHCIIKVKGKDSRGEPIVEIEDQ 81
Query: 128 DSTNGTFIDEKRL---------RSGVVAVASPGSR 153
S GT++D ++ + GV+ + +P ++
Sbjct: 82 SSRYGTWVDRVKIGYRRTGTLKKGGVIHLTAPNAK 116
>gi|442320547|ref|YP_007360568.1| type II/IV secretion system protein [Myxococcus stipitatus DSM
14675]
gi|441488189|gb|AGC44884.1| type II/IV secretion system protein [Myxococcus stipitatus DSM
14675]
Length = 594
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E E+T+GRLP D+++ VS H+RI K ++ D+ STNGTF++ K++
Sbjct: 17 EYHKPEITIGRLPGN-DIMLAKGNVSKYHSRIVAKDGKCIIVDMKSTNGTFVNGKKI--A 73
Query: 144 VVAVASPGSRITFGD 158
V P I GD
Sbjct: 74 APQVLKPTDEIYIGD 88
>gi|260579603|ref|ZP_05847472.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
gi|258602244|gb|EEW15552.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
Length = 188
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+V++GR + +V+ SG HAR+ ++G V DLDS NGT+I +RL V
Sbjct: 115 DVSIGR-SQSCTLVLEDDFASGTHARLIRRGSDWYVEDLDSRNGTWIGNERLDQPV--KL 171
Query: 149 SPGSRITFGDTHLAM 163
S G I G TH+ M
Sbjct: 172 SAGMEIRIGQTHVRM 186
>gi|303289799|ref|XP_003064187.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454503|gb|EEH51809.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 390
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 90 VTVGRLPERA---DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
V VGR +R D V VSG+H + + +G L VTDL STNGT++D + LR
Sbjct: 255 VVVGR--DRGPGIDYAAKVGCVSGVHCQFEMEGQRLYVTDLGSTNGTYVDGQELR 307
>gi|220909424|ref|YP_002484735.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Cyanothece sp. PCC 7425]
gi|219866035|gb|ACL46374.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Cyanothece sp. PCC 7425]
Length = 890
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
DMVI TVS HARI ++ + +TDLDS+NGTFI+ +++
Sbjct: 134 DMVIDHLTVSAFHARIDRQDNGWTITDLDSSNGTFINGEKI 174
>gi|452748395|ref|ZP_21948175.1| FHA domain-containing protein [Pseudomonas stutzeri NF13]
gi|452007801|gb|EME00054.1| FHA domain-containing protein [Pseudomonas stutzeri NF13]
Length = 284
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 25 RIKAKKHRNLGAIRASEADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFE 84
+I++ LGA+ D + ++ A RWLLQ V + H +
Sbjct: 75 QIRSGDRLRLGALELQIVDPAKAGAKVTS---APRWLLQVVKGENQGH---------KYH 122
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I + +T GR + ++ A +S HA KGD L V DL S NG ++ +++ +
Sbjct: 123 ITGS-MTFGR-SVKCELCFSDAELSRRHAEFYLKGDVLEVKDLASANGLLVNREKVTT-- 178
Query: 145 VAVASPGSRITFGDTHL 161
AV PG +I G+T L
Sbjct: 179 -AVLQPGDQIQLGNTTL 194
>gi|325967761|ref|YP_004243953.1| FHA domain-containing protein [Vulcanisaeta moutnovskia 768-28]
gi|323706964|gb|ADY00451.1| FHA domain containing protein [Vulcanisaeta moutnovskia 768-28]
Length = 135
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
E+T+GR PE ++IP TVS HA I G+ LL+ DL+STNGT++
Sbjct: 51 EITLGRSPENM-VIIPDPTVSRKHAVITMVGNELLIKDLNSTNGTYV 96
>gi|171910869|ref|ZP_02926339.1| putative transcriptional regulatory protein embR2 [Verrucomicrobium
spinosum DSM 4136]
Length = 192
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ + V VGR E D VIP +VS H I KG+S+ + DL STNGT D R+
Sbjct: 16 LDLTTERVRVGRA-EDNDFVIPDGSVSSYHGEIINKGESVELRDLGSTNGTHFDGARVEQ 74
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEES 181
A PG G V EAP+ +ES
Sbjct: 75 ---AEVGPGQSFRLGSV---TGYVEGEAVAEAPAGYDES 107
>gi|86157735|ref|YP_464520.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774246|gb|ABC81083.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 206
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 64 PVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL 123
P+G+G + + +E+A +GR D+VI A VS HA I + G++
Sbjct: 108 PLGEGAGQALSLRRDDGSEWEVARDRFLIGR-GRHCDLVIDSAKVSREHAAIVRDGEAWF 166
Query: 124 VTDLDSTNGTFIDEKRLR 141
+ DL S NGT+ D++R++
Sbjct: 167 IEDLGSANGTWHDQERIQ 184
>gi|377812781|ref|YP_005042030.1| putative forkhead-associated protein [Burkholderia sp. YI23]
gi|357937585|gb|AET91143.1| putative forkhead-associated protein [Burkholderia sp. YI23]
Length = 848
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ T+ T R R V VS HA + KG S V DL STNGTF++ +RL +
Sbjct: 161 FLVSKTDDTFARY--REQYPHQVNYVSRRHAHVFIKGGSPFVEDLGSTNGTFVNGERLGA 218
Query: 143 GVVAVASPGSRITFGDTHLAM 163
V + + G + FG TH A
Sbjct: 219 SAVELNN-GDTLAFGGTHFAY 238
>gi|197122450|ref|YP_002134401.1| FHA domain-containing protein [Anaeromyxobacter sp. K]
gi|196172299|gb|ACG73272.1| FHA domain containing protein [Anaeromyxobacter sp. K]
Length = 121
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDEKRLRSGVV 145
+T+GR E+AD+ + S LHARI ++ D + +VTDL STNGTF++ R+RS V+
Sbjct: 37 LTIGR-AEQADLPVDDRGASRLHARIARRPDGAWMVTDLGSTNGTFVNGVRVRSAVL 92
>gi|296122408|ref|YP_003630186.1| stage II sporulation E family protein [Planctomyces limnophilus DSM
3776]
gi|296014748|gb|ADG67987.1| Stage II sporulation E family protein [Planctomyces limnophilus DSM
3776]
Length = 566
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+EIA EV +GR PE + I VS HAR+ D ++ DL S NGTF++ K+L +
Sbjct: 15 YEIAGGEVVLGRHPE-CSIQINSNMVSRKHARVFSHDDGFVIEDLGSGNGTFLNGKKLEA 73
Query: 143 GVVAVASPGSRITFG 157
G RI G
Sbjct: 74 --ATKIKDGDRIKLG 86
>gi|444915844|ref|ZP_21235969.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Cystobacter fuscus DSM 2262]
gi|444712838|gb|ELW53751.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Cystobacter fuscus DSM 2262]
Length = 580
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ E E+T+GRL + D+ + VS H++I K +V D+ STNGTF++ K++
Sbjct: 14 EQIEFEKNEITIGRL-DGNDIRLAKGNVSKYHSKIIAKDGKFIVVDMKSTNGTFVNGKKI 72
Query: 141 RSGVVAVASPGSRITFGDTHL 161
V P +I+ GD L
Sbjct: 73 AGP--QVVKPTDQISIGDYIL 91
>gi|375108211|ref|ZP_09754472.1| FHA domain-containing protein [Burkholderiales bacterium JOSHI_001]
gi|374668942|gb|EHR73727.1| FHA domain-containing protein [Burkholderiales bacterium JOSHI_001]
Length = 231
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+I + T+GR P D+VI VSG HA +Q G + + DL+STNGT+I+ K ++
Sbjct: 17 QIIKDKTTLGRRPYN-DIVIDNLAVSGEHAVLQMVGQDVFIEDLNSTNGTYINGKAIK 73
>gi|336324606|ref|YP_004604572.1| hypothetical protein CRES_0045 [Corynebacterium resistens DSM
45100]
gi|336100588|gb|AEI08408.1| hypothetical protein CRES_0045 [Corynebacterium resistens DSM
45100]
Length = 172
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EVT+GR + +V+ SG HAR+ ++G + DLDS NGT+++ +R+ +
Sbjct: 99 EVTLGR-SQNCTLVLEDDFASGHHARLLRRGSDWFIEDLDSRNGTWLNNQRIDQ--LERL 155
Query: 149 SPGSRITFGDTHLAM 163
S G+ + G T++ M
Sbjct: 156 SAGAEVRIGQTNVRM 170
>gi|294653510|gb|ADF28629.1| zeaxanthin epoxidase [Solanum tuberosum]
Length = 669
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 37 IRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVT 91
R SE + D A ER WLL P G+G + + + V+
Sbjct: 510 CRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGTSGLEAIVLSRDEDVPCTIGSVS 569
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLRS--GVVA 146
+P ++ +V+P+ VS +HARI K + VTDL S +GT++ + +R R+
Sbjct: 570 HTNIPGKS-VVLPLPQVSEMHARISCKDGAFFVTDLQSEHGTWVTDNEGRRYRTSPNFPT 628
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
P I FG + A FRV + P TE EE+
Sbjct: 629 RFHPSDVIEFG-SDKAAFRVKAMKF--PPKTTERKEER 663
>gi|394988266|ref|ZP_10381104.1| hypothetical protein SCD_00668 [Sulfuricella denitrificans skB26]
gi|393792724|dbj|GAB70743.1| hypothetical protein SCD_00668 [Sulfuricella denitrificans skB26]
Length = 259
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
FEI +T+GR P D+ I +SG HA I + V DL STNGT ++E+ +
Sbjct: 16 FEIDKERITIGRNPHN-DIPIDNLAISGEHAAITTVNNEFFVEDLGSTNGTLVNEQPITK 74
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE---EKGDSPPL 190
+ G I G +R+ ++ E SK E E + + PP+
Sbjct: 75 HTL---HHGDEIEIGK-----YRLKYVNVQELGSKIEAHETGAQGFEKPPI 117
>gi|225020924|ref|ZP_03710116.1| hypothetical protein CORMATOL_00934 [Corynebacterium matruchotii
ATCC 33806]
gi|305681626|ref|ZP_07404432.1| FHA domain protein [Corynebacterium matruchotii ATCC 14266]
gi|224946296|gb|EEG27505.1| hypothetical protein CORMATOL_00934 [Corynebacterium matruchotii
ATCC 33806]
gi|305658786|gb|EFM48287.1| FHA domain protein [Corynebacterium matruchotii ATCC 14266]
Length = 157
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
TE+T+GR P+ D ++ SG HAR+ K+ V DLDS NGTF+ +++ G V V
Sbjct: 83 TEITIGRAPD-CDFLVSDDFASGRHARLIKRDSVWFVEDLDSRNGTFVHGEKI-EGPVRV 140
Query: 148 ASPGSRITFGDT 159
S GS I G T
Sbjct: 141 TS-GSDIKIGRT 151
>gi|294653512|gb|ADF28630.1| zeaxanthin epoxidase [Solanum tuberosum]
Length = 669
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 37 IRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVT 91
R SE + D A ER WLL P G+G + + + V+
Sbjct: 510 CRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGTSGLEAIVLSRDEDVPCTIGSVS 569
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE---KRLRS--GVVA 146
+P ++ +V+P+ VS +HARI K + VTDL S +GT++ + +R R+
Sbjct: 570 HTNIPGKS-VVLPLPQVSEMHARISCKDGAFFVTDLQSEHGTWVTDNEGRRYRTSPNFPT 628
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
P I FG + A FRV + P TE EE+
Sbjct: 629 RFHPSDVIEFG-SDKAAFRVKAMKF--PPKTTERKEER 663
>gi|332526917|ref|ZP_08403010.1| hypothetical protein RBXJA2T_13484 [Rubrivivax benzoatilyticus JA2]
gi|332111359|gb|EGJ11343.1| hypothetical protein RBXJA2T_13484 [Rubrivivax benzoatilyticus JA2]
Length = 220
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
+I + T+GR P D+VI VSG HA +Q G + + DL+STNGT+I+ K ++
Sbjct: 17 QITKDKTTLGRRPYN-DIVIDNLAVSGEHAVLQMVGADVFIEDLNSTNGTYINGKAIKKQ 75
Query: 144 VVA 146
++A
Sbjct: 76 LLA 78
>gi|284041484|ref|YP_003391824.1| FHA domain-containing protein [Conexibacter woesei DSM 14684]
gi|283945705|gb|ADB48449.1| FHA domain containing protein [Conexibacter woesei DSM 14684]
Length = 170
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 56 AAERWLLQPVGDGDTSHIGFKVP-MPD--AFEIASTEVTVGRLPERADMVIPVATVSGLH 112
AA+ L +GDG+ + + PD A+++A VT+GR + P A S H
Sbjct: 62 AADDLLGDAIGDGEPRLVVERAAGHPDGIAYDLARG-VTLGRGDVEIRLEDPFA--SSHH 118
Query: 113 ARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFR 165
ARI+++G L++ DL STNGT+++E+ LR + G RI GD+ + +
Sbjct: 119 ARIERQGSVLVLEDLGSTNGTYLNEEPLRG--IQPLHHGDRIRIGDSEFSYLQ 169
>gi|217968168|ref|YP_002353674.1| FHA domain-containing protein [Dictyoglomus turgidum DSM 6724]
gi|217337267|gb|ACK43060.1| FHA domain containing protein [Dictyoglomus turgidum DSM 6724]
Length = 153
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
F+I E T+GR E D+VIP TVS HA+I + D + DL S NGT ++
Sbjct: 74 FKIVKDETTIGREQEN-DIVIPNPTVSRFHAKIIRSEDKYFIEDLGSANGTMVN 126
>gi|225573392|ref|ZP_03782147.1| hypothetical protein RUMHYD_01584 [Blautia hydrogenotrophica DSM
10507]
gi|225039305|gb|EEG49551.1| ABC transporter, ATP-binding protein [Blautia hydrogenotrophica DSM
10507]
Length = 782
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
E+ +GR +R D+V+ +VS HA I ++GD+ V D STNGTF++ +R++
Sbjct: 143 ELLIGR-EQRCDVVLNHVSVSKRHASIVREGDAFFVVDHSSTNGTFVNGRRVQ 194
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
++ GR P+ D+V+P VS H + + + V DL+STNG + R+ SG++
Sbjct: 47 ISFGRSPDN-DLVLPSPNVSKHHGFFRLTANGVYVEDLNSTNGLLFNGTRVASGLL 101
>gi|15921063|ref|NP_376732.1| hypothetical protein ST0829 [Sulfolobus tokodaii str. 7]
gi|342306306|dbj|BAK54395.1| transcriptional regulator [Sulfolobus tokodaii str. 7]
Length = 238
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 73 IGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNG 132
I K+P+ +F+I + ++VGR PE +++P VS HA I +G L + DL+STNG
Sbjct: 146 INQKIPL--SFDIFPS-ISVGRSPENV-IIVPDPEVSRRHALISLEGGELYIEDLNSTNG 201
Query: 133 TFIDEKRLRSGVVAVA--SPGSRITFGD 158
T+I + +L V SP + I G+
Sbjct: 202 TYIYDGKLFQPVKGKQKISPNTIIKLGN 229
>gi|19551296|ref|NP_599298.1| FHA-domain-containing protein [Corynebacterium glutamicum ATCC
13032]
gi|62388941|ref|YP_224343.1| hypothetical protein cg0063 [Corynebacterium glutamicum ATCC 13032]
gi|418244999|ref|ZP_12871411.1| hypothetical protein KIQ_05823 [Corynebacterium glutamicum ATCC
14067]
gi|21322810|dbj|BAB97439.1| FHA-domain-containing proteins [Corynebacterium glutamicum ATCC
13032]
gi|41324274|emb|CAF18614.1| Secreted PROTEIN [Corynebacterium glutamicum ATCC 13032]
gi|354511014|gb|EHE83931.1| hypothetical protein KIQ_05823 [Corynebacterium glutamicum ATCC
14067]
gi|385142227|emb|CCH23266.1| FHA-domain-containing protein [Corynebacterium glutamicum K051]
Length = 154
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
S ++T+GR PE V+ SG+HAR+ K+G V DLDS NGTF+ R+
Sbjct: 78 VSEDMTMGRSPE-CTFVVGDDYASGMHARVFKRGSEWFVEDLDSRNGTFVGGTRI 131
>gi|383760495|ref|YP_005439481.1| FHA domain-containing protein [Rubrivivax gelatinosus IL144]
gi|381381165|dbj|BAL97982.1| FHA domain containing protein [Rubrivivax gelatinosus IL144]
Length = 221
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
+I + T+GR P D+VI VSG HA +Q G + + DL+STNGT+I+ K ++
Sbjct: 17 QITKDKTTLGRRPYN-DIVIDNLAVSGEHAVLQMVGADVFIEDLNSTNGTYINGKAIKKQ 75
Query: 144 VVA 146
++A
Sbjct: 76 LLA 78
>gi|210635959|ref|ZP_03298633.1| hypothetical protein COLSTE_02572 [Collinsella stercoris DSM 13279]
gi|210158297|gb|EEA89268.1| FHA domain protein [Collinsella stercoris DSM 13279]
Length = 104
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D +E+ S TVGR AD+V+ VS HA++ G + DL+STNGT ++ +R+
Sbjct: 23 DTYELTSARATVGRERSMADVVLRDPNVSRRHAQLTFTGSDWSIEDLNSTNGTLVNNRRI 82
>gi|108757503|ref|YP_629777.1| FHA domain/GGDEF domain-containing protein [Myxococcus xanthus DK
1622]
gi|108461383|gb|ABF86568.1| FHA domain/GGDEF domain protein [Myxococcus xanthus DK 1622]
Length = 354
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR--- 139
+ I E+T+GR + +V+ + VS HARI +G +LV DL STNGTF++++
Sbjct: 99 YLIEDAELTIGR-DQHNHIVVDLDNVSRRHARILGRGGKMLVEDLGSTNGTFLNDQEVLQ 157
Query: 140 ---LRSGVVAVASPGSRITFGD 158
LRSG + V GS F D
Sbjct: 158 ASPLRSGDL-VKVGGSIFKFLD 178
>gi|297526264|ref|YP_003668288.1| FHA domain containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255180|gb|ADI31389.1| FHA domain containing protein [Staphylothermus hellenicus DSM
12710]
Length = 116
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 79 MPDA-FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
MP + + E +GR P D+VIP VS HARI + + DLDSTNGT +D
Sbjct: 24 MPQTEWSLEPGEYVLGRYPTN-DIVIPDPYVSRRHARIFYENGEWHIEDLDSTNGTIVDN 82
Query: 138 KRLRSGVVAVASPGSRITFGDTHLA 162
+ +R + S I G T L+
Sbjct: 83 EDIRGKGPKKINNNSEIVVGLTILS 107
>gi|281210603|gb|EFA84769.1| hypothetical protein PPL_01761 [Polysphondylium pallidum PN500]
Length = 431
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 47 TTTTTSTDVAAERWLLQPVGDGDTSHIGFK----------VPMPDAFEIASTEVTVGRLP 96
T +T + D+ W +P+ + H+ F +P+ D + +GR
Sbjct: 66 TVSTPTIDLDCPFWASEPMSSRN-DHLKFYKGGERSSTFTIPLDDL-----KYIILGRST 119
Query: 97 ERADMVIPVATVSGLHARIQKKGDSLL-VTDLDSTNGTFIDEKRLRSGVVAVASPGSRIT 155
D + T+S HA + D L + DL+S++GTFID+ R+ S + + G +I
Sbjct: 120 TLCDYALTHPTISRKHAMLAHDSDGRLNIVDLNSSHGTFIDQVRIESSIPHLLKHGQKIY 179
Query: 156 FG 157
FG
Sbjct: 180 FG 181
>gi|413964583|ref|ZP_11403809.1| putative forkhead-associated protein [Burkholderia sp. SJ98]
gi|413927257|gb|EKS66546.1| putative forkhead-associated protein [Burkholderia sp. SJ98]
Length = 843
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ T+ T R R + V VS HA + KG + V DL STNGTF++ +RL +
Sbjct: 163 FLVSKTDDTFSRY--RDEYPHQVNYVSRRHAHVFIKGGAPFVEDLGSTNGTFVNGERLGA 220
Query: 143 GVVAVASPGSRITFGDTHLAM 163
V + + G + FG TH A
Sbjct: 221 SAVELKN-GDTVAFGGTHFAY 240
>gi|379733590|ref|YP_005327095.1| hypothetical protein BLASA_0041 [Blastococcus saxobsidens DD2]
gi|378781396|emb|CCG01046.1| Conserved protein of unknown function; putative FHA domain
[Blastococcus saxobsidens DD2]
Length = 154
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 82 AFEIASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
A ++ T++T+G P RAD +V+ S HAR+ +G V DL STNGT++
Sbjct: 67 AGPLSGTKITLGDQPILIGRADDSTLVLTDDFASSRHARLTNRGGQWYVEDLGSTNGTYL 126
Query: 136 DEKRLRSGVVAVASPGSRITFGDTHLAM 163
D++R++ G + VA PG I G T L +
Sbjct: 127 DQQRVQ-GPLLVA-PGQPIRIGQTALEL 152
>gi|444305059|ref|ZP_21140846.1| DNA segregation ATPase FtsK [Arthrobacter sp. SJCon]
gi|443482594|gb|ELT45502.1| DNA segregation ATPase FtsK [Arthrobacter sp. SJCon]
Length = 1358
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+ TVGR A +V+P A +S HAR+ + + DLDS NGT++D +R+R V
Sbjct: 115 QYTVGR--SNARIVLPDAELSREHARLTLTDKDIFIEDLDSANGTYVDGERIRHSAV--- 169
Query: 149 SPGSRITFGDTHLAMF 164
+ GS I G++ +++
Sbjct: 170 TAGSTIRCGNSTMSLM 185
>gi|229815376|ref|ZP_04445711.1| hypothetical protein COLINT_02422 [Collinsella intestinalis DSM
13280]
gi|229809156|gb|EEP44923.1| hypothetical protein COLINT_02422 [Collinsella intestinalis DSM
13280]
Length = 136
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FE+ EVT+GR P + + TVS HA+I + S+L+ DL S NGT++D
Sbjct: 46 NVFELDQPEVTIGRDPSNT-IFLNDMTVSRSHAKILRNAASVLIEDLGSLNGTWVD---- 100
Query: 141 RSGVVAVASP---GSRITFGDTHLAMFRVSKIDTVE 173
G + ++P GS + G T M+ S ++ +E
Sbjct: 101 --GAIVNSAPLHDGSSVQIG-TFTLMYHESTVERIE 133
>gi|333978756|ref|YP_004516701.1| FHA domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822237|gb|AEG14900.1| FHA domain containing protein [Desulfotomaculum kuznetsovii DSM
6115]
Length = 259
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + + + +GR + D+V ++VS HA+++ +G ++TDL STNG +++ R+ +
Sbjct: 180 FPLQPSTMVIGRR-DTCDVVFSDSSVSRRHAQLEYRGGEYVITDLGSTNGVYVNGVRVNT 238
Query: 143 GVVAVASPGSRITFGDTHLAMFRV 166
V+A PG I G T L +F V
Sbjct: 239 KVLA---PGDAIKMGAT-LCIFEV 258
>gi|146279451|ref|YP_001169609.1| hypothetical protein Rsph17025_3427 [Rhodobacter sphaeroides ATCC
17025]
gi|145557692|gb|ABP72304.1| hypothetical protein Rsph17025_3427 [Rhodobacter sphaeroides ATCC
17025]
Length = 503
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S T+GR A + IP +VS LHA ++ G L+++D+ S NGTF++ +R++ G
Sbjct: 425 VPSPTATIGRAGTNA-VPIPDDSVSRLHAELKLSGGGLMLSDMGSLNGTFVNGRRIKEGT 483
Query: 145 VAVASPGSRITFGDTHLAM 163
G +I FG L +
Sbjct: 484 --CVKDGDQIGFGQIRLRL 500
>gi|51246422|ref|YP_066306.1| hypothetical protein DP2570 [Desulfotalea psychrophila LSv54]
gi|50877459|emb|CAG37299.1| hypothetical protein DP2570 [Desulfotalea psychrophila LSv54]
Length = 405
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 68 GDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
GD S +G P+ ++ +GR P D+VI + +SG HA +++K L + DL
Sbjct: 125 GDWSLLGANDPVRGKVFPLVGKMVMGRGPG-CDIVIDSSCISGKHAELEEKAGCLQIRDL 183
Query: 128 DSTNGTFIDEKR-----LRSG 143
STNGTF+ K+ LRSG
Sbjct: 184 SSTNGTFVAGKKITFAELRSG 204
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 73 IGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNG 132
+G V F + +TVGR E D+V+ ATVS HAR+ G V D S NG
Sbjct: 258 VGRGVFSGQIFNLKGAVLTVGRTEEN-DIVLNEATVSSRHARLLVVGGGWKVEDSGSQNG 316
Query: 133 TFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
T I+ K + S + G I+FG
Sbjct: 317 TIINGKPVESQEL---KDGDLISFGKAECCY 344
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 75 FKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
F P E+ +T + +GR + D+V+ +S HA IQ + + DL S NG+F
Sbjct: 6 FTDPQMPTVELNTTRLAIGR-DKSNDLVLADTDISAFHAEIQTEETRSYLVDLGSANGSF 64
Query: 135 IDEKRL 140
+ K++
Sbjct: 65 VGGKKI 70
>gi|209522455|ref|ZP_03271055.1| FHA domain containing protein [Burkholderia sp. H160]
gi|209497107|gb|EDZ97362.1| FHA domain containing protein [Burkholderia sp. H160]
Length = 213
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++ I V +G E D+++ VS HA I+ + +L ++DL S+NGTF++ R+
Sbjct: 113 NSYAIEKPNVRIG-ADEANDLIVRDYYVSRKHANIRFESGTLYLSDLGSSNGTFLNGARV 171
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRVSK 168
+ V SPG +I FG T + R S+
Sbjct: 172 KR--VMTLSPGDQIRFGHTTWEVRRASE 197
>gi|50954865|ref|YP_062153.1| hypothetical protein Lxx12015 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951347|gb|AAT89048.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 130
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFI-----DEKRLRSGVVAVASPGSRITFGD 158
P VSG H RI++ GD+ +VTDL STNGT + +LR G AV G+ + GD
Sbjct: 51 PTQEVSGTHLRIEQSGDAAVVTDLRSTNGTVVLRPGAQAVQLRPGESAVVLAGTVVEIGD 110
Query: 159 THLAMFRVSKIDTVEAP--SKTEESEE 183
++ I+ + AP + EE E
Sbjct: 111 GNI-------IEIIAAPIGDRREEGPE 130
>gi|148053196|gb|ABQ52698.1| zeaxanthin epoxidase [Solanum lycopersicum]
gi|154432877|gb|ABS82068.1| chloroplast zeaxanthin epoxidase precursor [Solanum lycopersicum]
Length = 669
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 37 IRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVT 91
R SE + D A ER WLL P G+G + + + ++
Sbjct: 510 CRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGSSGLEAIVLSRDEDVPCTVGSIS 569
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLRS--GVVA 146
+P ++ +V+P+ VS +HARI K + VTDL S +GT++ + +R R+
Sbjct: 570 HTNIPGKS-IVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPT 628
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
P I FG A FRV ++ P KT E +E+
Sbjct: 629 RFHPSDVIEFGSDK-AAFRVK---AMKFPLKTSERKEE 662
>gi|5902706|sp|P93236.1|ABA2_SOLLC RecName: Full=Zeaxanthin epoxidase, chloroplastic; Flags: Precursor
gi|1772985|emb|CAB06084.1| zeaxanthin epoxidase [Solanum lycopersicum]
Length = 669
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 37 IRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVT 91
R SE + D A ER WLL P G+G + + + ++
Sbjct: 510 CRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGSSGLEAIVLSRDEDVPCTVGSIS 569
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLRS--GVVA 146
+P ++ +V+P+ VS +HARI K + VTDL S +GT++ + +R R+
Sbjct: 570 HTNIPGKS-IVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPT 628
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
P I FG A FRV ++ P KT E +E+
Sbjct: 629 RFHPSDVIEFGSDK-AAFRVK---AMKFPLKTSERKEE 662
>gi|383456917|ref|YP_005370906.1| FHA domain- TPR-repeat-containing protein [Corallococcus
coralloides DSM 2259]
gi|380730116|gb|AFE06118.1| FHA domain- TPR-repeat-containing protein [Corallococcus
coralloides DSM 2259]
Length = 739
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
EIA E+ +GR + D+V+ VS HAR+ +G ++ V D S NGTF+D +R+ G
Sbjct: 17 EIAG-ELKIGRQ-QGNDLVLTEGGVSRQHARVYVEGGTVYVEDGGSQNGTFVDGERI-EG 73
Query: 144 VVAVASPGSRITFGDTHLAM 163
A+ +P S++ GD L +
Sbjct: 74 PTAL-TPASQVLLGDYELKL 92
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ VGR P A +V+ +VS HA ++++G +L DL S NGT ++ + L V +
Sbjct: 190 LLVGRAPP-AAVVLDDDSVSRKHAEVKREGTGVLARDLGSANGTLLNGELLGEEFVDL-Q 247
Query: 150 PGSRITFG 157
PG + FG
Sbjct: 248 PGDVLQFG 255
>gi|381157714|ref|ZP_09866947.1| FHA domain-containing protein [Thiorhodovibrio sp. 970]
gi|380879072|gb|EIC21163.1| FHA domain-containing protein [Thiorhodovibrio sp. 970]
Length = 139
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDS-LLVTDLDSTNGTFI-----DEKRL 140
+T++ +GR P R ++ + TVS HA + GD LL+TD S NGTF+ +RL
Sbjct: 5 TTKIHIGRDP-RCEIALNHHTVSSQHAELSFLGDGKLLLTDCRSRNGTFLIAANGQRQRL 63
Query: 141 RSGVVAVASPGSRITFGDTHL---AMFRVSKIDTVEAPSKTEESEEKGDSP 188
+V SP ++ FG+ L + ++ + A SKTE E +P
Sbjct: 64 HQALV---SPMDQVDFGEARLRVREILEAWRLKSPAAASKTEAPSEPEPTP 111
>gi|302388840|ref|YP_003824661.1| FHA domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302199468|gb|ADL07038.1| FHA domain containing protein [Thermosediminibacter oceani DSM
16646]
Length = 144
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA---- 146
T+GR + +D+VI +S HA I KKG +++ DL STNGTF++ KR++ V
Sbjct: 61 TIGRAGD-SDIVINDPYLSSKHAMIFKKGRRMVIQDLKSTNGTFLNGKRIKKAVALKEKD 119
Query: 147 VASPGSR 153
V + GSR
Sbjct: 120 VITMGSR 126
>gi|296139861|ref|YP_003647104.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Tsukamurella paurometabola DSM 20162]
gi|296027995|gb|ADG78765.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Tsukamurella paurometabola DSM 20162]
Length = 851
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 75 FKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
F+V A + A +VT+GR P+ D+VIP VS HAR+ L+V DL S NGT
Sbjct: 194 FQVAPVSAPQAAGGQVTIGRTPDN-DLVIPDMLVSRRHARLLTGPQGLVVEDLHSANGTQ 252
Query: 135 IDEKRL 140
++ +R+
Sbjct: 253 VNGRRI 258
>gi|443315618|ref|ZP_21045099.1| FHA domain-containing protein [Leptolyngbya sp. PCC 6406]
gi|442784766|gb|ELR94625.1| FHA domain-containing protein [Leptolyngbya sp. PCC 6406]
Length = 246
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 91 TVGRLPERADMVIPVATVSGLHAR-IQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
T+GR P++A + + +S HA + K ++ DL STNGTF++ R+R G
Sbjct: 100 TIGRDPQKAALSLRDRRLSRCHAALVYDKNHGFMIHDLGSTNGTFVNGVRIRHGY--TLQ 157
Query: 150 PGSRITFGDTHLAMFRVSKIDTVEAPS 176
G I G + F ++ APS
Sbjct: 158 DGDHIRLGSLNFRFFHATEFRRTAAPS 184
>gi|383775211|ref|YP_005459777.1| hypothetical protein AMIS_410 [Actinoplanes missouriensis 431]
gi|381368443|dbj|BAL85261.1| hypothetical protein AMIS_410 [Actinoplanes missouriensis 431]
Length = 261
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ ST + G ++A++ +P +S HAR+ G+ +++TDL STNGT ++ +R
Sbjct: 183 LQMGSTVIGRG---DQANLRLPDVGISRRHARLDYDGNQVVLTDLGSTNGTMVNGQR--- 236
Query: 143 GVVAVA-SPGSRITFGDTHLAMFRV 166
V AVA +PG I G T L FRV
Sbjct: 237 -VSAVALNPGDMIQLGTTTLT-FRV 259
>gi|386845114|ref|YP_006263127.1| Oxoglutarate dehydrogenase inhibitor [Actinoplanes sp. SE50/110]
gi|359832618|gb|AEV81059.1| Oxoglutarate dehydrogenase inhibitor [Actinoplanes sp. SE50/110]
Length = 265
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ ST + G ++A++ +P +S HAR+ G+ +++TDL STNGT ++ +R
Sbjct: 187 LQMGSTVIGRG---DQANLRLPDVGISRRHARLDYDGNQVVLTDLGSTNGTMVNGQR--- 240
Query: 143 GVVAVA-SPGSRITFGDTHLAMFRV 166
V AVA +PG I G T L FRV
Sbjct: 241 -VSAVALNPGDMIQLGTTTLT-FRV 263
>gi|359778336|ref|ZP_09281605.1| hypothetical protein ARGLB_085_01170 [Arthrobacter globiformis NBRC
12137]
gi|359304253|dbj|GAB15434.1| hypothetical protein ARGLB_085_01170 [Arthrobacter globiformis NBRC
12137]
Length = 1411
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
A++ +P A +S HARI+ +L + DL S NGT +D KR+ VA+ GSRI G+
Sbjct: 126 AELTVPDADLSREHARIEVSDTALTLVDLGSINGTEVDGKRVSKTAVAI---GSRIRCGN 182
Query: 159 THLAMFRVSKIDTVEA 174
+ +++ + D EA
Sbjct: 183 SSMSVVLAAPSDAREA 198
>gi|295700336|ref|YP_003608229.1| FHA domain-containing protein [Burkholderia sp. CCGE1002]
gi|295439549|gb|ADG18718.1| FHA domain containing protein [Burkholderia sp. CCGE1002]
Length = 869
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ T+ R +R V +S HA + KG L V DL STNGTF++ +R+
Sbjct: 160 FLVSKTDEIFSRYKDRYPH--QVNYISRRHAHLFLKGGQLYVEDLGSTNGTFVNGQRIGE 217
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEA-PSKTEES 181
+A+ G + FG H ++RVS ++ +A P+ T+ S
Sbjct: 218 SALALVD-GDVVAFGGDHF-VYRVSLQNSADAEPTVTQLS 255
>gi|48477359|ref|YP_023065.1| hypothetical protein PTO0287 [Picrophilus torridus DSM 9790]
gi|48430007|gb|AAT42872.1| hypothetical protein PTO0287 [Picrophilus torridus DSM 9790]
Length = 255
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 65 VGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLV 124
V D + K+P+ F++ E+T+GR PE +V+P A VS HA I+ + + +
Sbjct: 156 VNSPDARFVKSKIPL--EFDVFP-EITIGRSPENV-IVVPDADVSKKHAVIRMNNNVIEI 211
Query: 125 TDLDSTNGTFI 135
DL+STNGTF+
Sbjct: 212 EDLNSTNGTFL 222
>gi|108802882|ref|YP_642819.1| FHA domain-containing protein [Rubrobacter xylanophilus DSM 9941]
gi|108764125|gb|ABG03007.1| FHA domain containing protein [Rubrobacter xylanophilus DSM 9941]
Length = 280
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 19/93 (20%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF-----IDEKRLRSGVV 145
TVGR E D+V+P VS HARI + + ++ DL STNGT ID +R+ S
Sbjct: 192 TVGRSQEN-DIVLPDPNVSRRHARILRAENGFVIEDLGSTNGTLLDGAPIDRERIES--- 247
Query: 146 AVASPGSRITFGDTHLAMFRVSKIDTVEAPSKT 178
G +TFG T R +EAP +T
Sbjct: 248 -----GDELTFGQTTARFVR-----RIEAPEET 270
>gi|410658816|ref|YP_006911187.1| hypothetical protein DHBDCA_p2175 [Dehalobacter sp. DCA]
gi|410661802|ref|YP_006914173.1| hypothetical protein DCF50_p2185 [Dehalobacter sp. CF]
gi|409021171|gb|AFV03202.1| hypothetical protein DHBDCA_p2175 [Dehalobacter sp. DCA]
gi|409024158|gb|AFV06188.1| hypothetical protein DCF50_p2185 [Dehalobacter sp. CF]
Length = 261
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ +++ E VGR E D+ + +S H ++ + V DL STNGT++++ R+
Sbjct: 179 EIYDLNKDEYIVGR-QEDCDIEVRDLEISRHHLKLYTENRRWFVQDLGSTNGTYLNKLRV 237
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRVSK 168
+V +PG RI G TH F+V K
Sbjct: 238 DRYMV---NPGDRIKAGQTHFQ-FQVDK 261
>gi|253580442|ref|ZP_04857707.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848172|gb|EES76137.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 296
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+G+L D VI + TVS +HA+I+KK ++ ++D++S NGT ++ + LR P
Sbjct: 223 IGKLETACDAVISLPTVSRIHAKIRKKEENYFLSDMNSRNGTSVNGRLLRPDEEYQLEPE 282
Query: 152 SRITF 156
+ F
Sbjct: 283 DEVDF 287
>gi|163848206|ref|YP_001636250.1| ABC transporter-like protein [Chloroflexus aurantiacus J-10-fl]
gi|222526114|ref|YP_002570585.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Chloroflexus sp. Y-400-fl]
gi|163669495|gb|ABY35861.1| ABC transporter related [Chloroflexus aurantiacus J-10-fl]
gi|222449993|gb|ACM54259.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Chloroflexus sp. Y-400-fl]
Length = 864
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKK-GDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
E+T+GR+ D+++ VS HAR+ + G +L+ D+ STNGTF++ +R+ + V V
Sbjct: 169 EITIGRI--GCDIILDNPQVSRFHARLDRAPGGGVLLRDMGSTNGTFVNGQRVTAPV--V 224
Query: 148 ASPGSRITFGDTHLAMFRVSKID 170
PG I G L ++ V+ +D
Sbjct: 225 LKPGDVIQIGAFKL-VYNVTSLD 246
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+T+GR P+ D+V+ VSG HARI+ G + D+ S NG +R+
Sbjct: 68 LTIGRAPDN-DIVLQSRFVSGRHARIEPNGQGHRIVDVGSRNGLLFAGQRI 117
>gi|28493201|ref|NP_787362.1| hypothetical protein TWT234 [Tropheryma whipplei str. Twist]
gi|28572685|ref|NP_789465.1| hypothetical protein TW536 [Tropheryma whipplei TW08/27]
gi|28410817|emb|CAD67203.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
gi|28476242|gb|AAO44331.1| unknown [Tropheryma whipplei str. Twist]
Length = 143
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 88 TEVTV-GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
T++++ GR P +D+ + TVS HA ++ GD V DL S NGTF+ ++R+ + A
Sbjct: 63 TQISIAGRHPA-SDIFLDDVTVSRRHAEFKRDGDIFRVVDLGSLNGTFVMQQRVDN---A 118
Query: 147 VASPGSRITFGDTHLAMF 164
V G + G HL F
Sbjct: 119 VLCDGFEVQIGKFHLTFF 136
>gi|220918877|ref|YP_002494181.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956731|gb|ACL67115.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 315
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + +GR PE A + I +S +HA +++ D + V DL+S NGTF+ E R+
Sbjct: 16 FALPEIPTVLGRSPE-AHLQIEDPWISSMHAMFERRADGVWVIDLESRNGTFLGEDRIAE 74
Query: 143 GVVAVASPGSRITFGDTHL 161
+ PG + FG T +
Sbjct: 75 ARI---EPGMVLRFGRTEV 90
>gi|225386983|ref|ZP_03756747.1| hypothetical protein CLOSTASPAR_00733 [Clostridium asparagiforme
DSM 15981]
gi|225046995|gb|EEG57241.1| hypothetical protein CLOSTASPAR_00733 [Clostridium asparagiforme
DSM 15981]
Length = 66
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D V+ +TVS LH RI ++G+ +TDL+STNGT + + L + A G I D
Sbjct: 2 DYVLNRSTVSRLHVRIDREGEEYRITDLNSTNGTMVGGRLLEANETAGICTGDEICIADL 61
Query: 160 HLAMFR 165
L FR
Sbjct: 62 -LFTFR 66
>gi|148655804|ref|YP_001276009.1| FHA domain-containing protein [Roseiflexus sp. RS-1]
gi|148567914|gb|ABQ90059.1| FHA domain containing protein [Roseiflexus sp. RS-1]
Length = 346
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ + T+GR P R D+ + VS +H RI+ + DL STNGTFI E+RL
Sbjct: 21 LRQPQYTIGRNPAR-DLHLDSPVVSNMHGRIEAGPQGAQLIDLGSTNGTFIGERRLPPNQ 79
Query: 145 VAVASPGSRITFG 157
PG + G
Sbjct: 80 PYPLVPGEEVRIG 92
>gi|392570477|gb|EIW63650.1| kinase-like protein [Trametes versicolor FP-101664 SS1]
Length = 635
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 83 FEIASTEVTVGRLP-ERADMVIPVATVSGLHARIQKKGD-----SLLVTDLDSTNGTFID 136
FE A E +GR ++V+P +SG H I+ G+ ++ VTD +S NGTFI+
Sbjct: 51 FEKAVQEYRIGRKAGPSVEIVLPAPKISGRHCTIKWNGEENATSAVTVTD-NSRNGTFIN 109
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMFRVSKID 170
R+ +G + G+ I FG L V D
Sbjct: 110 GGRIPTGTSHILRDGNEIAFGSRKLLDLEVEAYD 143
>gi|410667762|ref|YP_006920133.1| cell division protein FtsW [Thermacetogenium phaeum DSM 12270]
gi|409105509|gb|AFV11634.1| cell division protein FtsW [Thermacetogenium phaeum DSM 12270]
Length = 568
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
I E +GR ER +VI VSG HAR+ +G +TDL STNGT ++ +RL
Sbjct: 58 ILGRETILGR-SERCSVVISDPYVSGRHARVFYQGGRYYITDLGSTNGTILNGQRL 112
>gi|283782276|ref|YP_003373031.1| PAS/PAC sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
gi|283440729|gb|ADB19171.1| PAS/PAC sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
Length = 675
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 89 EVTVGRLPER------ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+VT+ LP R A + IP ++VS +HA ++ L + DL STNGTF++ +R+R
Sbjct: 25 QVTITPLPFRVGRSSDAQLWIPSSSVSKIHAEFFERDGQLYLRDLGSTNGTFVNAERIR- 83
Query: 143 GVVAVAS 149
G VAV S
Sbjct: 84 GDVAVQS 90
>gi|197122954|ref|YP_002134905.1| FHA domain-containing protein [Anaeromyxobacter sp. K]
gi|196172803|gb|ACG73776.1| FHA domain containing protein [Anaeromyxobacter sp. K]
Length = 206
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+E+A +GR D+VI A VS HA I + GD+ + DL S NGT+ D++R++
Sbjct: 127 WEVARDRFLIGR-GRHCDLVIDSAKVSREHAAIVRDGDAWFIEDLGSANGTWHDQERIQ 184
>gi|428301966|ref|YP_007140272.1| forkhead-associated protein [Calothrix sp. PCC 6303]
gi|428238510|gb|AFZ04300.1| Forkhead-associated protein [Calothrix sp. PCC 6303]
Length = 188
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P R D+V+ TVSGLH I + S +V +L S N ID +RL G + +
Sbjct: 31 VRIGRDPVRCDIVLSHPTVSGLHIEIFFNLQQHSFMVRNLRSQNPPLIDGQRLVHGELQL 90
Query: 148 ASPGSRITFGDTHLAMFRVSKIDTVEA 174
+ GS I G L + V + V A
Sbjct: 91 HA-GSVIFLGQVQLLVISVPEESNVAA 116
>gi|357590515|ref|ZP_09129181.1| hypothetical protein CnurS_09964 [Corynebacterium nuruki S6-4]
Length = 171
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+TVGR +V+ SG HAR+ ++G+ + DLDS NGTF+D +R+
Sbjct: 98 EITVGR-STGCTLVLEDDFASGTHARLHRRGEDWYLEDLDSRNGTFLDGQRI 148
>gi|162448925|ref|YP_001611292.1| protein kinase [Sorangium cellulosum So ce56]
gi|161159507|emb|CAN90812.1| Protein kinase [Sorangium cellulosum So ce56]
Length = 563
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + +++GR ++ D+V+ ATVSG HA ++ + S LV DL+STNGT+ D R
Sbjct: 327 FPLQKPVLSIGRRSDQ-DLVLAEATVSGSHALLRWQTGSWLVEDLNSTNGTYADFPFERK 385
Query: 143 GVVAVASPGSRITFGDTHL 161
V++ G+ + G+ L
Sbjct: 386 AQVSLLH-GAEVQLGECRL 403
>gi|309811409|ref|ZP_07705196.1| FHA domain protein [Dermacoccus sp. Ellin185]
gi|308434716|gb|EFP58561.1| FHA domain protein [Dermacoccus sp. Ellin185]
Length = 156
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR PE +V+ SG HARI + D + DL STNGT+I +R+ G PG
Sbjct: 86 LGRNPE-CSLVLSDDFASGRHARIYPESDGWYLDDLGSTNGTYIGAERI--GEHVRVEPG 142
Query: 152 SRITFGDTHLAM 163
+RI G T L +
Sbjct: 143 TRIRIGRTVLEL 154
>gi|428222967|ref|YP_007107137.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
gi|427996307|gb|AFY75002.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
Length = 323
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I +T TVGR E + +++ S HA +Q L V DL S NGTF++ KR+ +
Sbjct: 19 INATAWTVGR-SEDSAIILDDTWASRNHAVLQIMESKLYVIDLGSLNGTFVNGKRVN--I 75
Query: 145 VAVASPGSRITFGDTHLAMFRVSKIDTVEAPS 176
V + G +ITF T +F ++ T+EAP+
Sbjct: 76 PIVLNNGDKITFATTESHIFFEEQV-TIEAPA 106
>gi|253742015|gb|EES98870.1| Hypothetical protein GL50581_3904 [Giardia intestinalis ATCC 50581]
Length = 422
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+ VGR + D+ + ++SG HA+I +G + V DL+S NGT+I++ ++++ V V
Sbjct: 21 IVVGRSAD-CDISLDTKSISGHHAKILLEGPTNSAVIDLNSRNGTYINDIKIKNDSVPVY 79
Query: 149 SPGSRITFGDTHLAMFRVS-KIDTVEAPSKTEESEE 183
PG I FG T L FR+ ID P T E E
Sbjct: 80 -PGDTIRFG-TDLPPFRLEFSIDKTLEPLATSEPSE 113
>gi|427419329|ref|ZP_18909512.1| FHA domain-containing protein [Leptolyngbya sp. PCC 7375]
gi|425762042|gb|EKV02895.1| FHA domain-containing protein [Leptolyngbya sp. PCC 7375]
Length = 206
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDS-LLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
T+GR P ++D+ + +S HA +Q D +++DL+STNGT+++ ++L+ V
Sbjct: 92 TIGRDPRQSDLAVLDKRLSRCHAALQYSPDQGFIISDLESTNGTYVNGEKLKR--VYTLR 149
Query: 150 PGSRITFGDTHLAMF 164
G RI G + F
Sbjct: 150 DGDRIRIGSSLFYFF 164
>gi|239916643|ref|YP_002956201.1| FHA domain-containing protein [Micrococcus luteus NCTC 2665]
gi|281414900|ref|ZP_06246642.1| FHA domain-containing protein [Micrococcus luteus NCTC 2665]
gi|239837850|gb|ACS29647.1| FHA domain-containing protein [Micrococcus luteus NCTC 2665]
Length = 303
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++ +GR ERAD+VIP ++VS H R+ G ++ + DL S NG ++ +R+ V
Sbjct: 223 DLILGRSAERADLVIPDSSVSREHLRLLTVGSTVTLLDLGSRNGVLVNGRRVDGSV--TL 280
Query: 149 SPGSRITFGDTHLAMF 164
G +T G T L F
Sbjct: 281 RDGDVVTVGQTELLFF 296
>gi|220917746|ref|YP_002493050.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955600|gb|ACL65984.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 206
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+E+A +GR D+VI A VS HA I + GD+ + DL S NGT+ D++R++
Sbjct: 127 WEVARDRFLIGR-GRHCDLVIDSAKVSREHAAIVRDGDAWFIEDLGSANGTWHDQERIQ 184
>gi|291450637|ref|ZP_06590027.1| ABC transporter ATP-binding protein [Streptomyces albus J1074]
gi|291353586|gb|EFE80488.1| ABC transporter ATP-binding protein [Streptomyces albus J1074]
Length = 847
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
AS T+GR P+ D+ + A VS HA I +G S ++ D STNGTF++ +R++ +
Sbjct: 10 ASRPYTLGRDPQ-GDIALDDARVSWRHASISWRGGSWVIEDHGSTNGTFVEGRRVQQQEI 68
Query: 146 AVASPGSRITFGD 158
PGS + G+
Sbjct: 69 G---PGSAVNLGN 78
>gi|295094181|emb|CBK83272.1| FOG: FHA domain [Coprococcus sp. ART55/1]
Length = 468
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 37 IRASEADSSTTTTTTSTD----VAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTV 92
+ SE D +T T + D +R ++ + DG F V P+ V +
Sbjct: 341 VLGSEDDCTTLLTQHNLDGRESAQEQRLSVRLIEDGGIVATEFPVT-PEG-------VVL 392
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
GR +AD VI +VS H RI + + + V DLDSTNGT I+ RL +G
Sbjct: 393 GRDRRQADQVIEDISVSRRHIRIYEDAEKIYVEDLDSTNGTVINGIRLPTG 443
>gi|428779751|ref|YP_007171537.1| family 3 adenylate cyclase [Dactylococcopsis salina PCC 8305]
gi|428694030|gb|AFZ50180.1| family 3 adenylate cyclase [Dactylococcopsis salina PCC 8305]
Length = 552
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 70 TSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLD 128
T HI + ++A +V +GRLPE D+ +P + VS H +I++ V DL
Sbjct: 8 TLHIYIEGSPEQTLDVAQDQVILGRLPE-CDVYLPSSEVSRRHCQIRRLAQGKWRVEDLG 66
Query: 129 STNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
STNGT +++ RL + + G I G+ + M
Sbjct: 67 STNGTLLNQGRLNQP--TLINDGDVIQLGNVGIRM 99
>gi|15893334|ref|NP_346683.1| FHA domain-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337735245|ref|YP_004634692.1| FHA domain-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384456754|ref|YP_005669174.1| membrane protein, containing FHA domain [Clostridium acetobutylicum
EA 2018]
gi|15022857|gb|AAK78023.1|AE007517_3 Predicted membrane protein, containing FHA domain [Clostridium
acetobutylicum ATCC 824]
gi|325507443|gb|ADZ19079.1| membrane protein, containing FHA domain [Clostridium acetobutylicum
EA 2018]
gi|336289886|gb|AEI31020.1| FHA domain-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 468
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR+ +AD + V LHA I+K+ + + DL S NGTF++ +++ S + G
Sbjct: 394 IGRISGQADYISDNKAVGKLHAEIRKQNEKYYLIDLTSRNGTFVNGQKINSDELYEIRNG 453
Query: 152 SRITFGDTHLAM 163
I F ++
Sbjct: 454 DTIMFANSEFTF 465
>gi|442804884|ref|YP_007373033.1| forkhead-associated FHA domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442740734|gb|AGC68423.1| forkhead-associated FHA domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 512
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
I V +GRL + D I V +HA I +K D + DL+S NGT+++ +R+
Sbjct: 432 ITKDSVLLGRLSDSVDYAINNRAVGKIHAEIVRKDDGYYIIDLNSVNGTYVNNERI 487
>gi|157869979|ref|XP_001683540.1| putative protein kinase [Leishmania major strain Friedlin]
gi|68126606|emb|CAJ04050.1| putative protein kinase [Leishmania major strain Friedlin]
Length = 538
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P D+V+P VS LH + GD + V D +S NGTFI+ +R+ G + P
Sbjct: 98 IGRDPSCCDLVLPSNLVSRLHCVLSVLGDDVFVHD-NSFNGTFINGRRVGRGRCSALHPR 156
Query: 152 SRITF 156
++F
Sbjct: 157 DTLSF 161
>gi|359144473|ref|ZP_09178426.1| ABC transporter ATP-binding protein [Streptomyces sp. S4]
Length = 854
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
AS T+GR P+ D+ + A VS HA I +G S ++ D STNGTF++ +R++ +
Sbjct: 17 ASRPYTLGRDPQ-GDIALDDARVSWRHASISWRGGSWVIEDHGSTNGTFVEGRRVQQQEI 75
Query: 146 AVASPGSRITFGD 158
PGS + G+
Sbjct: 76 G---PGSAVNLGN 85
>gi|257792766|ref|YP_003183372.1| FHA domain-containing protein [Eggerthella lenta DSM 2243]
gi|317489051|ref|ZP_07947576.1| FHA domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325831020|ref|ZP_08164344.1| FHA domain protein [Eggerthella sp. HGA1]
gi|257476663|gb|ACV56983.1| FHA domain containing protein [Eggerthella lenta DSM 2243]
gi|316911783|gb|EFV33367.1| FHA domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486941|gb|EGC89387.1| FHA domain protein [Eggerthella sp. HGA1]
Length = 137
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
V VGR P AD+V+ VSG HAR Q G +L V DL STNGT ++ +
Sbjct: 64 VIVGRSPG-ADIVVGAGYVSGRHARFQLMGQNLFVEDLGSTNGTGVNGQ 111
>gi|444915845|ref|ZP_21235970.1| hypothetical protein D187_08252 [Cystobacter fuscus DSM 2262]
gi|444712839|gb|ELW53752.1| hypothetical protein D187_08252 [Cystobacter fuscus DSM 2262]
Length = 739
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S E+ VGR D+ + VS HAR ++ +++V D+ S NGTF+D +R+ +G A
Sbjct: 19 SGELRVGRQEGTNDLTLAEGGVSRRHARFFEEDGTVMVEDVGSANGTFVDGQRI-TGATA 77
Query: 147 VASPGSRITFGDTHLAM 163
+ +P S + GD L +
Sbjct: 78 L-TPTSEVVLGDYALRL 93
>gi|421738233|ref|ZP_16176599.1| ABC-type multidrug transport system, ATPase component [Streptomyces
sp. SM8]
gi|406693353|gb|EKC97008.1| ABC-type multidrug transport system, ATPase component [Streptomyces
sp. SM8]
Length = 859
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
AS T+GR P+ D+ + A VS HA I +G S ++ D STNGTF++ +R++ +
Sbjct: 17 ASRPYTLGRDPQ-GDIALDDARVSWRHASISWRGGSWVIEDHGSTNGTFVEGRRVQQQEI 75
Query: 146 AVASPGSRITFGD 158
PGS + G+
Sbjct: 76 G---PGSAVNLGN 85
>gi|220917787|ref|YP_002493091.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955641|gb|ACL66025.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 272
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 69 DTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLD 128
D + G ++P+ + T+GR RAD+ +P A S LHAR++ +G ++ V DL
Sbjct: 134 DGASAGARLPL-------GPDQTIGR-SRRADLRLPEAQASRLHARVRVRGGAITVEDLG 185
Query: 129 STNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
+ NG ++ + G A+A PG + G LA+
Sbjct: 186 AKNGLRVNGVAVERGPRALA-PGDELELGGCALALV 220
>gi|124265260|ref|YP_001019264.1| hypothetical protein Mpe_A0067 [Methylibium petroleiphilum PM1]
gi|124258035|gb|ABM93029.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 220
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
++ + T+GR P D+VI VSG HA +Q G + + DL+STNGT+I+ K ++
Sbjct: 17 QLTKDKTTLGRRPYN-DIVIDNLAVSGEHAVLQMVGQDVFIEDLNSTNGTYINGKAVK 73
>gi|156742773|ref|YP_001432902.1| FHA domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156234101|gb|ABU58884.1| FHA domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 354
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+ T+GR P R D+ + VS +H RI + DL STNGTFI E+RL
Sbjct: 37 QYTIGRNPAR-DLHLDSPVVSNMHGRIDAGPQGAQLVDLGSTNGTFIGERRLPPNQPYPL 95
Query: 149 SPGSRITFG 157
PG + G
Sbjct: 96 VPGEEVRIG 104
>gi|338813387|ref|ZP_08625516.1| FHA domain-containing protein [Acetonema longum DSM 6540]
gi|337274746|gb|EGO63254.1| FHA domain-containing protein [Acetonema longum DSM 6540]
Length = 155
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
E+++GR PE ++VIP A VS HA I ++ +TDL STNGT+ +
Sbjct: 82 EISIGRGPEN-NVVIPEAVVSHEHACISRRKQEYWLTDLSSTNGTYYN 128
>gi|442323398|ref|YP_007363419.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441491040|gb|AGC47735.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 175
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDS--LLVTDLDSTNGTFIDEKRLRSGVVAV 147
+TVGR P+ D+V+ +VS HA++ G+S + DL S+NGTF++ + L SG
Sbjct: 86 LTVGRQPD-CDLVVNEPSVSKRHAKLCWWGESKGCTLVDLKSSNGTFVNARELESGGELH 144
Query: 148 ASPGSRITFGDTHLAMF 164
G + FGD A
Sbjct: 145 LRDGDLLGFGDATFAYL 161
>gi|145355236|ref|XP_001421871.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582110|gb|ABP00165.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 313
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
D+V+P+ VS +H ++ +G+ L +TDL STNGT+++
Sbjct: 191 DLVVPLPCVSTVHCELETEGNKLYITDLGSTNGTYVE 227
>gi|126464601|ref|YP_001045714.1| FHA domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|126106412|gb|ABN78942.1| FHA domain containing protein [Rhodobacter sphaeroides ATCC 17029]
Length = 503
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S T+GR A + IP +VS LHA ++ G L+++D+ S NGTF++ +R++ G
Sbjct: 425 VPSPAATIGRAGTNA-VPIPDDSVSRLHAELKLSGSGLMLSDMGSLNGTFVNGRRIKEGT 483
Query: 145 VAVASPGSRITFGDTHLAM 163
G +I FG L +
Sbjct: 484 --RVKDGDQIGFGQIRLRL 500
>gi|209520347|ref|ZP_03269112.1| FHA domain containing protein [Burkholderia sp. H160]
gi|209499221|gb|EDZ99311.1| FHA domain containing protein [Burkholderia sp. H160]
Length = 868
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ T+ R +R V +S HA + KG L V DL STNGTF++ KRL
Sbjct: 160 FLVSKTDEVFSRYKDRYPH--QVNYISRRHAHLFLKGGELYVEDLGSTNGTFVNGKRLDE 217
Query: 143 GVVAVASPGSRITFGDTHLAMFRVS 167
+ + G + FG H ++RVS
Sbjct: 218 SALPLVE-GDVVAFGGDHF-VYRVS 240
>gi|297570715|ref|YP_003696489.1| FHA domain-containing protein [Arcanobacterium haemolyticum DSM
20595]
gi|296931062|gb|ADH91870.1| FHA domain containing protein [Arcanobacterium haemolyticum DSM
20595]
Length = 154
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
A + S+ +TVGR P+ A +V+ S HAR ++GD + DL+STNGT++ ++
Sbjct: 74 ALPLGSSSITVGRSPDSA-LVLDDGYASSRHARFYREGDQWFIEDLNSTNGTWVGTSKI 131
>gi|229816126|ref|ZP_04446439.1| hypothetical protein COLINT_03174, partial [Collinsella
intestinalis DSM 13280]
gi|229808295|gb|EEP44084.1| hypothetical protein COLINT_03174 [Collinsella intestinalis DSM
13280]
Length = 107
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR- 139
D +E+ S TVGR AD+V+ VS HA + G + DL+STNGT ++ +R
Sbjct: 26 DTYELTSARATVGRERSVADVVLRDPNVSRRHAELTFTGSDWSIEDLNSTNGTMVNNRRI 85
Query: 140 ----LRSGVVAVASPGSRITFG 157
LR+G V +TFG
Sbjct: 86 TRCPLRNGDV--------LTFG 99
>gi|149917805|ref|ZP_01906300.1| FHA domain containing protein [Plesiocystis pacifica SIR-1]
gi|149821325|gb|EDM80727.1| FHA domain containing protein [Plesiocystis pacifica SIR-1]
Length = 226
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 82 AFEIASTEVTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
AF + + VT+GR E D+ P VSG H RI + + + DL S+NGT++ R+
Sbjct: 148 AFPVKDSGVTIGR--EDGDITFPTDGYVSGSHCRIVGDDEGVFLEDLGSSNGTYM---RV 202
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRV 166
R G + PGS I G +FR+
Sbjct: 203 RKG--QLVHPGSLILIGQQ---LFRI 223
>gi|297564164|ref|YP_003683137.1| FHA domain-containing protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848613|gb|ADH70631.1| FHA domain containing protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 168
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL- 140
+ ++AS + +GR P+ + +VI SG HAR+ V DL+STNGT++ +++L
Sbjct: 88 SVDLASQPILIGRAPD-STLVITDDYASGRHARVYSDNGRWFVEDLNSTNGTYLGQQKLN 146
Query: 141 RSGVVAVASPGSRITFGDTHLAM 163
R + V P I G T L +
Sbjct: 147 RPQPITVGQP---IRIGKTVLEL 166
>gi|386347192|ref|YP_006045441.1| FHA domain-containing protein [Spirochaeta thermophila DSM 6578]
gi|339412159|gb|AEJ61724.1| FHA domain containing protein [Spirochaeta thermophila DSM 6578]
Length = 114
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
T++T+GR + D+VI S HA IQK + + DL+STNGT ++ R+
Sbjct: 39 TKITIGRASDN-DVVIDNKLASRYHAFIQKIKNEYFLKDLNSTNGTHLNGVRIPPDKYVK 97
Query: 148 ASPGSRITFGDTHLAMF 164
+PG +T G T+L +
Sbjct: 98 LAPGDVVTIGKTNLIVM 114
>gi|115373423|ref|ZP_01460721.1| response regulator HsfA [Stigmatella aurantiaca DW4/3-1]
gi|115369589|gb|EAU68526.1| response regulator HsfA [Stigmatella aurantiaca DW4/3-1]
Length = 467
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ E TVG+ P D+V+ T+S H +++ + + +L DLDS NG+F + LR
Sbjct: 50 LTRAEYTVGKAPT-CDIVLSDKTISRQHLKLEVRDEHVLAIDLDSRNGSFCEG--LRFSQ 106
Query: 145 VAVASPGSRITFGDTHLAM 163
V + PGS IT G T L +
Sbjct: 107 VEL-RPGSAITLGTTELKL 124
>gi|355340877|gb|AER58215.1| serine phosphatase [uncultured Acidobacteria bacterium]
Length = 548
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 106 ATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFR 165
A +S H I++KGDS V DL+S NGTF++ +R+ + P RIT G HLA+
Sbjct: 48 AGLSRQHLIIERKGDSWTVQDLNSKNGTFVNGERITTAF--TLGPNDRITAG--HLAL-- 101
Query: 166 VSKIDTVEAPSKT 178
D V AP+ T
Sbjct: 102 -EFADKVAAPANT 113
>gi|332560745|ref|ZP_08415063.1| FHA domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332274543|gb|EGJ19859.1| FHA domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 503
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S T+GR A + IP +VS LHA ++ G L+++D+ S NGTF++ +R++ G
Sbjct: 425 VPSPAATIGRAGTNA-VPIPDDSVSRLHAELKLSGSGLMLSDMGSLNGTFVNGRRIKEGT 483
Query: 145 VAVASPGSRITFGDTHLAM 163
G +I FG L +
Sbjct: 484 --RVKDGDQIGFGQIRLRL 500
>gi|410663982|ref|YP_006916353.1| FHA domain-containing protein [Simiduia agarivorans SA1 = DSM
21679]
gi|409026339|gb|AFU98623.1| FHA domain-containing protein [Simiduia agarivorans SA1 = DSM
21679]
Length = 277
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F IA +GR + ++VIP +S HA + L + DL S+NGTF++E+RL +
Sbjct: 123 FVIAPGVSAIGRATQ-CEIVIPGTHLSRQHAEFELSNGQLRIRDLGSSNGTFVNEERLTA 181
Query: 143 GVVAVASPGSRITF 156
PG R+ F
Sbjct: 182 NQPLRLVPGDRLRF 195
>gi|229584632|ref|YP_002843133.1| FHA domain-containing protein [Sulfolobus islandicus M.16.27]
gi|238619573|ref|YP_002914398.1| FHA domain-containing protein [Sulfolobus islandicus M.16.4]
gi|228019681|gb|ACP55088.1| FHA domain containing protein [Sulfolobus islandicus M.16.27]
gi|238380642|gb|ACR41730.1| FHA domain containing protein [Sulfolobus islandicus M.16.4]
Length = 208
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 69 DTSHIGF-KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
+T + F K +P F+I + +++GR PE +VIP VS HA I + + L + DL
Sbjct: 109 NTPNPAFNKTKLPLDFDIFPS-ISIGRSPENV-IVIPDPEVSRKHAIISFENNELYLEDL 166
Query: 128 DSTNGTFIDEKRLRS---GVVAVASPGSRITFGDT 159
+STNGT+I + ++ G V V P S I G+
Sbjct: 167 NSTNGTYIYDGKVFQPVKGKVKV-QPNSIIKLGNN 200
>gi|380300738|ref|ZP_09850431.1| FHA domain-containing protein [Brachybacterium squillarum M-6-3]
Length = 169
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ ST + +GR PE +V+ S HAR+ ++ +V DL STNGT + +R+ V
Sbjct: 89 LGSTPILIGRAPE-CTLVLDDDYASNRHARVYERDGEWIVEDLGSTNGTLVSGRRIEGAV 147
Query: 145 VAVASPGSRITFGDTHLAMFR 165
PG+++ G T + + R
Sbjct: 148 --PFRPGAQVRIGRTEIELRR 166
>gi|255078074|ref|XP_002502617.1| predicted protein [Micromonas sp. RCC299]
gi|226517882|gb|ACO63875.1| predicted protein [Micromonas sp. RCC299]
Length = 455
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
D V V VSG+H + + +G+ L VTDL STNGT++ + +R
Sbjct: 331 DYVAKVNCVSGVHCQFEMEGNKLFVTDLGSTNGTYVAGREVR 372
>gi|197122998|ref|YP_002134949.1| FHA domain-containing protein [Anaeromyxobacter sp. K]
gi|196172847|gb|ACG73820.1| FHA domain containing protein [Anaeromyxobacter sp. K]
Length = 272
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 69 DTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLD 128
D + G ++P+ + T+GR RAD+ +P A S LHAR++ +G ++ V DL
Sbjct: 134 DGASAGARLPL-------GPDQTLGR-SRRADLRLPEAQASRLHARVRVRGGAITVEDLG 185
Query: 129 STNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
+ NG ++ + G A+A PG + G LA+
Sbjct: 186 AKNGLRVNGVAVERGPRALA-PGDELELGGCALALV 220
>gi|227827417|ref|YP_002829196.1| FHA domain-containing protein [Sulfolobus islandicus M.14.25]
gi|227459212|gb|ACP37898.1| FHA domain containing protein [Sulfolobus islandicus M.14.25]
Length = 208
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 69 DTSHIGF-KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
+T + F K +P F+I + +++GR PE +VIP VS HA I + + L + DL
Sbjct: 109 NTPNPAFNKTKLPLDFDIFPS-ISIGRSPENV-IVIPDPEVSRKHAIISFENNELYLEDL 166
Query: 128 DSTNGTFIDEKRLRS---GVVAVASPGSRITFGDT 159
+STNGT+I + ++ G V V P S I G+
Sbjct: 167 NSTNGTYIYDGKVFQPVKGKVKV-QPNSIIKLGNN 200
>gi|367471179|ref|ZP_09470835.1| FHA domain containing protein [Patulibacter sp. I11]
gi|365813785|gb|EHN09027.1| FHA domain containing protein [Patulibacter sp. I11]
Length = 156
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
++F +A VT+GR PE +D+ + TVS HA + + D + DL S NGT+++ +R+
Sbjct: 75 ESFPLAGERVTIGRRPE-SDLFLDDVTVSRDHAIVVSRHDGWHIDDLGSLNGTYVNRRRI 133
Query: 141 RSGVVAVASPGSRITFGDTHLAMF 164
S ++ S G + G L
Sbjct: 134 DSSLL---SDGDEVQVGKYKLTFL 154
>gi|336372080|gb|EGO00420.1| hypothetical protein SERLA73DRAFT_160290 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384830|gb|EGO25978.1| hypothetical protein SERLADRAFT_415321 [Serpula lacrymans var.
lacrymans S7.9]
Length = 679
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 38 RASEADSSTTTTTTSTDVAAERW-LLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLP 96
+A+++ + + T S D+ A W LQP + D ++++ T VT+GR P
Sbjct: 22 QATQSTQAASQPTNSNDINAHLWGFLQPCSSS--------LRRIDFWKLSPT-VTLGRGP 72
Query: 97 ERADMVIPVATVSGLHARIQ---KKGDSLLVTDLD-STNGTFIDEKRLRSGVVAVASPGS 152
+ D+V P A VS H R+ K+ VT LD S+NGT+I+ ++ + G+
Sbjct: 73 DN-DVVFPGAKVSNKHCRLMWDGKEDKQSSVTILDTSSNGTYINGVKIGREKTGILKEGN 131
Query: 153 RITFG 157
I FG
Sbjct: 132 EIAFG 136
>gi|6681690|dbj|BAA88842.1| zea-Xanthin epoxidase [Gentiana lutea]
gi|193795402|gb|ACF21781.1| zeaxanthin epoxidase [Gentiana lutea]
Length = 662
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS-----PGSRI 154
D+VI A VS HA+I+ K + V DL S +GT+I + R V S P I
Sbjct: 568 DVVISSAQVSKQHAQIEYKDGAFFVVDLQSEHGTYITDNEGRRYRVTPNSPTRLHPSDII 627
Query: 155 TFGDTHLAMFRVSKIDTVEAPSKTEESEEKGD 186
FG A FRV ++ P K E+ KG+
Sbjct: 628 EFGSDKKAAFRVK---VMKNPPKIAENTSKGN 656
>gi|385773094|ref|YP_005645660.1| FHA domain-containing protein [Sulfolobus islandicus HVE10/4]
gi|385775723|ref|YP_005648291.1| FHA domain-containing protein [Sulfolobus islandicus REY15A]
gi|323474471|gb|ADX85077.1| FHA domain containing protein [Sulfolobus islandicus REY15A]
gi|323477208|gb|ADX82446.1| FHA domain containing protein [Sulfolobus islandicus HVE10/4]
Length = 208
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 69 DTSHIGF-KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
+T + F K +P F+I + +++GR PE +VIP VS HA I + + L + DL
Sbjct: 109 NTPNPAFNKTKLPLDFDIFPS-ISIGRSPENV-IVIPDPEVSRKHAIISFENNELYLEDL 166
Query: 128 DSTNGTFIDEKRLRS---GVVAVASPGSRITFGDT 159
+STNGT+I + ++ G V V P S I G+
Sbjct: 167 NSTNGTYIYDGKVFQPVKGKVKV-QPNSIIKLGNN 200
>gi|310822568|ref|YP_003954926.1| Fis family sigma-54 dependent transcriptional regulator
[Stigmatella aurantiaca DW4/3-1]
gi|309395640|gb|ADO73099.1| Sigma-54 dependent transcriptional regulator, Fis family
[Stigmatella aurantiaca DW4/3-1]
Length = 461
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ E TVG+ P D+V+ T+S H +++ + + +L DLDS NG+F + LR
Sbjct: 44 LTRAEYTVGKAPT-CDIVLSDKTISRQHLKLEVRDEHVLAIDLDSRNGSFCEG--LRFSQ 100
Query: 145 VAVASPGSRITFGDTHLAM 163
V + PGS IT G T L +
Sbjct: 101 VEL-RPGSAITLGTTELKL 118
>gi|257069801|ref|YP_003156056.1| FHA domain-containing protein [Brachybacterium faecium DSM 4810]
gi|256560619|gb|ACU86466.1| FHA domain-containing protein [Brachybacterium faecium DSM 4810]
Length = 175
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+ + ST + +GR PE +V+ S HAR+ ++ +V DL STNGT + +R+
Sbjct: 92 SLTLGSTPILIGRAPE-CTLVLDDDYASNRHARVFQRDGEWMVEDLGSTNGTLVSGRRIE 150
Query: 142 SGVVAVASPGSRITFGDTHLAMFR 165
V PG+++ G T + + R
Sbjct: 151 GAV--PFRPGAQVRIGRTEIELRR 172
>gi|160935903|ref|ZP_02083277.1| hypothetical protein CLOBOL_00796 [Clostridium bolteae ATCC
BAA-613]
gi|158441145|gb|EDP18862.1| hypothetical protein CLOBOL_00796 [Clostridium bolteae ATCC
BAA-613]
Length = 512
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I+ +G+ + AD V+ TVS H R+ + S VTDL+STNGT + + L +
Sbjct: 433 ISYYPFVIGKHKDLADYVLLKDTVSRFHIRLDEDNGSYTVTDLNSTNGTRVKGRLLEANE 492
Query: 145 VAVASPGSRITFGDTHLAMF 164
PG +I D +
Sbjct: 493 TMQLEPGDQIFIADCGYIFY 512
>gi|403715861|ref|ZP_10941509.1| hypothetical protein KILIM_033_00120 [Kineosphaera limosa NBRC
100340]
gi|403210306|dbj|GAB96192.1| hypothetical protein KILIM_033_00120 [Kineosphaera limosa NBRC
100340]
Length = 177
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + + T GR P+ +D+ + TVS HA Q +GDS +V D+ S NGT+++ + +
Sbjct: 94 FLLDAPTTTTGRHPD-SDIFLDDVTVSRKHAVFQVEGDSFVVRDVGSLNGTYVNRELVDQ 152
Query: 143 GVVAVASPGSRITFGDTHLAMF 164
AV PG + G L +
Sbjct: 153 ---AVLRPGDEVQIGKYRLVFY 171
>gi|219848537|ref|YP_002462970.1| FHA domain-containing protein [Chloroflexus aggregans DSM 9485]
gi|219542796|gb|ACL24534.1| FHA domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 238
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 18/107 (16%)
Query: 39 ASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVG 93
+++ D T D AA R LLQ GDTS A IA+T V++G
Sbjct: 122 SNQVDQPNMTKIMQVDQAASRSSGAFLLLQT---GDTSQ---------ALPIATTMVSIG 169
Query: 94 RLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
R + D+++ VS HA+++ + +TDL STNGTF++ +R+
Sbjct: 170 RGLDN-DIILEDTRVSRKHAQLRYRQRRFWLTDLGSTNGTFVNGERI 215
>gi|254786412|ref|YP_003073841.1| FHA domain-containing protein [Teredinibacter turnerae T7901]
gi|237684215|gb|ACR11479.1| FHA domain protein [Teredinibacter turnerae T7901]
Length = 300
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 78 PMPDAF----EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
PM A + + +GR E D+ + VA +S HAR+ L V DLDS NGT
Sbjct: 118 PMSRALGERQYVVNETAVIGRARE-CDISLGVAHLSRRHARLTVTERGLRVDDLDSANGT 176
Query: 134 FIDEKRLRSGVVAVASPGSRITF 156
F++ +R+++ AV PG +++F
Sbjct: 177 FVNGQRIKT---AVLKPGDQLSF 196
>gi|419847687|ref|ZP_14370853.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 1-6B]
gi|419854734|ref|ZP_14377515.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 44B]
gi|291516890|emb|CBK70506.1| FOG: FHA domain [Bifidobacterium longum subsp. longum F8]
gi|386410521|gb|EIJ25302.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 1-6B]
gi|386417392|gb|EIJ31876.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 44B]
Length = 147
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+TVGR P RAD+++ +TVS HA ++ V D S NGT+++ +R+ A
Sbjct: 68 EITVGRDP-RADILLDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQ---AAL 123
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S I
Sbjct: 124 KNGDEIMIGKFRLVFFTKSAI 144
>gi|317483259|ref|ZP_07942254.1| FHA domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
gi|322689189|ref|YP_004208923.1| hypothetical protein BLIF_1002 [Bifidobacterium longum subsp.
infantis 157F]
gi|316915328|gb|EFV36755.1| FHA domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
gi|320460525|dbj|BAJ71145.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 147
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+TVGR P RAD+++ +TVS HA ++ V D S NGT+++ +R+ A
Sbjct: 68 EITVGRDP-RADILLDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQ---ATL 123
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S I
Sbjct: 124 KNGDEIMIGKFRLVFFTKSAI 144
>gi|23335106|ref|ZP_00120344.1| COG1716: FOG: FHA domain [Bifidobacterium longum DJO10A]
gi|23465324|ref|NP_695927.1| signal transduction protein [Bifidobacterium longum NCC2705]
gi|189439336|ref|YP_001954417.1| hypothetical protein BLD_0473 [Bifidobacterium longum DJO10A]
gi|213692241|ref|YP_002322827.1| FHA domain-containing protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|227547231|ref|ZP_03977280.1| FOG: FHA domain protein [Bifidobacterium longum subsp. longum ATCC
55813]
gi|239622177|ref|ZP_04665208.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312132730|ref|YP_004000069.1| protein [Bifidobacterium longum subsp. longum BBMN68]
gi|384199415|ref|YP_005585158.1| hypothetical protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|384201529|ref|YP_005587276.1| hypothetical protein BLNIAS_01440 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|419849897|ref|ZP_14372919.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 35B]
gi|419853031|ref|ZP_14375876.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 2-2B]
gi|23325964|gb|AAN24563.1| possible signal transduction protein [Bifidobacterium longum
NCC2705]
gi|189427771|gb|ACD97919.1| Hypothetical protein BLD_0473 [Bifidobacterium longum DJO10A]
gi|213523702|gb|ACJ52449.1| FHA domain containing protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|227212351|gb|EEI80247.1| FOG: FHA domain protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239515368|gb|EEQ55235.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|311773691|gb|ADQ03179.1| Hypothetical protein BBMN68_459 [Bifidobacterium longum subsp.
longum BBMN68]
gi|320458367|dbj|BAJ68988.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|338754536|gb|AEI97525.1| hypothetical protein BLNIAS_01440 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|386409172|gb|EIJ24040.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 2-2B]
gi|386410851|gb|EIJ25623.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
longum subsp. longum 35B]
Length = 147
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+TVGR P RAD+++ +TVS HA ++ V D S NGT+++ +R+ A
Sbjct: 68 EITVGRDP-RADILLDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQ---ATL 123
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S I
Sbjct: 124 KNGDEIMIGKFRLVFFTKSAI 144
>gi|444912039|ref|ZP_21232206.1| FHA domain protein [Cystobacter fuscus DSM 2262]
gi|444717406|gb|ELW58238.1| FHA domain protein [Cystobacter fuscus DSM 2262]
Length = 171
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDS-LLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+TVGR D+V+ TVS HA Q++ L+TD S NGTF++ RL
Sbjct: 82 ITVGRTGNN-DVVLEDGTVSRFHAWFQRESQGGYLLTDAGSKNGTFVEGVRLLPRRACAL 140
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEA 174
+ G+R+ FG L + S V A
Sbjct: 141 NDGARVRFGHVELTFYLASGFTKVLA 166
>gi|257413127|ref|ZP_04742088.2| FHA domain containing protein [Roseburia intestinalis L1-82]
gi|257204521|gb|EEV02806.1| FHA domain containing protein [Roseburia intestinalis L1-82]
Length = 352
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
D VIP TVS HARI +KG+ + DL+S+NGT + + L V + F D
Sbjct: 287 CDGVIPSGTVSRHHARITRKGEVYFIEDLNSSNGTMVGGELLNCRVKMSLQAQETVMFAD 346
>gi|187918724|ref|YP_001887755.1| FHA domain-containing protein [Burkholderia phytofirmans PsJN]
gi|187717162|gb|ACD18385.1| FHA domain containing protein [Burkholderia phytofirmans PsJN]
Length = 860
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG L V DL STNGTF+ KRL + + G + FG H ++
Sbjct: 180 VNYISRRHAHIFLKGGELYVEDLGSTNGTFVGGKRLDESALPLVE-GDLVAFGGDHF-VY 237
Query: 165 RVS 167
RVS
Sbjct: 238 RVS 240
>gi|148262037|ref|YP_001236164.1| putative adenylate/guanylate cyclase [Acidiphilium cryptum JF-5]
gi|146403718|gb|ABQ32245.1| putative adenylate/guanylate cyclase [Acidiphilium cryptum JF-5]
Length = 310
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I +T+GR P +V+ VS H +++ + D + +TDLDS+NGTF+D RL SG
Sbjct: 213 IGPEPLTIGRTPP-CPVVLRDREVSRQHCQLELRNDEVWLTDLDSSNGTFLDGNRL-SGP 270
Query: 145 VAVASPGSRITFGDTHL 161
+A G+ I G+ L
Sbjct: 271 ALLAH-GAVIRLGNQEL 286
>gi|359418521|ref|ZP_09210502.1| hypothetical protein GOARA_013_00150 [Gordonia araii NBRC 100433]
gi|358245485|dbj|GAB08571.1| hypothetical protein GOARA_013_00150 [Gordonia araii NBRC 100433]
Length = 182
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 82 AFEIASTE-VTVGRLPE--RADMVIPVA---TVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
A IA E V +GR P+ AD+ P + VS +HA ++ G + VTDL S+NGTF+
Sbjct: 89 AITIADGETVGLGRSPDYPHADLFAPESGFDNVSRIHAALRYAGGRVYVTDLGSSNGTFV 148
Query: 136 DEKRLRSGVVAVASPGSRI 154
+ R+ SG PG +
Sbjct: 149 NGTRIESGAEYEVHPGQAL 167
>gi|72163459|ref|YP_291116.1| FHA domain-containing protein [Thermobifida fusca YX]
gi|71917191|gb|AAZ57093.1| FHA domain protein [Thermobifida fusca YX]
Length = 253
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 59 RWLLQPVG---DGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI 115
R LL P G DG + G + A+E+ S +GR + D+ + VS HA I
Sbjct: 151 RLLLSPGGAAADGSLTAQGAQ----QAYELTSEVTLLGRGTD-CDLRLVDNGVSRHHAEI 205
Query: 116 QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFR 165
+ +G+ ++ DL+STNGTF++ ++++ A GSRI+ G T + R
Sbjct: 206 RLEGNEAILVDLNSTNGTFVNGQQVQR---ARLVDGSRISLGRTTMTFRR 252
>gi|336320361|ref|YP_004600329.1| Forkhead-associated protein [[Cellvibrio] gilvus ATCC 13127]
gi|336103942|gb|AEI11761.1| Forkhead-associated protein [[Cellvibrio] gilvus ATCC 13127]
Length = 492
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE-----KRLRSGV 144
VT LP + P +S HA ++ +GD +LVTDL STNG + +RL G
Sbjct: 409 VTNRELPRLVAVPSPQQDISRTHAEVRAEGDHVLVTDLHSTNGVHVSRPGEGARRLHPGE 468
Query: 145 VAVASPGSRITFGD 158
+V +PG + GD
Sbjct: 469 PSVVAPGETVDLGD 482
>gi|326405549|ref|YP_004285631.1| hypothetical protein ACMV_34020 [Acidiphilium multivorum AIU301]
gi|325052411|dbj|BAJ82749.1| hypothetical protein ACMV_34020 [Acidiphilium multivorum AIU301]
Length = 310
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I +T+GR P +V+ VS H +++ + D + +TDLDS+NGTF+D RL SG
Sbjct: 213 IGPEPLTIGRTPP-CPVVLRDREVSRQHCQLELRNDEVWLTDLDSSNGTFLDGNRL-SGP 270
Query: 145 VAVASPGSRITFGDTHL 161
+A G+ I G+ L
Sbjct: 271 ALLAH-GAVIRLGNQEL 286
>gi|22298883|ref|NP_682130.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus
BP-1]
gi|22295064|dbj|BAC08892.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus
BP-1]
Length = 1029
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 77 VPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
VP+ + T+GR P D+VI TVS HA+I+++ L+TDL S+NGTF++
Sbjct: 247 VPVKTISLVGYNTFTIGRDPNN-DLVIGHPTVSRHHAKIERRNGDFLLTDLGSSNGTFVN 305
Query: 137 EK 138
+
Sbjct: 306 GR 307
>gi|83589758|ref|YP_429767.1| FHA domain-containing protein [Moorella thermoacetica ATCC 39073]
gi|83572672|gb|ABC19224.1| FHA domain containing protein [Moorella thermoacetica ATCC 39073]
Length = 252
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 80 PDA---FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
PDA F + +GR P D V+ VS H ++++ D +LVTDL S NGT ++
Sbjct: 167 PDAGRTFLLQKGRQVLGRQPA-CDFVLTDEQVSRRHCQVEESHDRVLVTDLGSRNGTMVN 225
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAM 163
+R+ A PG R+ G + L +
Sbjct: 226 GRRVER---AFLKPGDRLQVGRSVLEL 249
>gi|338983163|ref|ZP_08632389.1| Putative adenylate/guanylate cyclase [Acidiphilium sp. PM]
gi|338207918|gb|EGO95829.1| Putative adenylate/guanylate cyclase [Acidiphilium sp. PM]
Length = 310
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I +T+GR P +V+ VS H +++ + D + +TDLDS+NGTF+D RL SG
Sbjct: 213 IGPEPLTIGRTPP-CPVVLRDREVSRQHCQLELRNDEVWLTDLDSSNGTFLDGNRL-SGP 270
Query: 145 VAVASPGSRITFGDTHL 161
+A G+ I G+ L
Sbjct: 271 ALLAH-GAVIRLGNQEL 286
>gi|291540428|emb|CBL13539.1| FOG: FHA domain [Roseburia intestinalis XB6B4]
Length = 352
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
D VIP TVS HARI +KG+ + DL+S+NGT + + L V + F D
Sbjct: 287 CDGVIPSGTVSRHHARITRKGEVYFIEDLNSSNGTMVGGELLNCRVKMSLQAQETVMFAD 346
>gi|402574139|ref|YP_006623482.1| FHA domain-containing protein [Desulfosporosinus meridiei DSM
13257]
gi|402255336|gb|AFQ45611.1| FHA domain-containing protein [Desulfosporosinus meridiei DSM
13257]
Length = 272
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS-LLVTDLDSTNGTFIDE 137
M F + E VGR + ++V+ +S H +I GD+ + DL STNGTF++
Sbjct: 185 MGQRFSLQDEEAIVGR-HSQCNLVLHDPEISRRHLKIAPGGDNGWWLDDLGSTNGTFVNG 243
Query: 138 KRLRSGVVAVASPGSRITFGDTHLAMFR 165
+R+ A PG RIT G + L + R
Sbjct: 244 QRITHHTTA---PGDRITIGQSTLVIQR 268
>gi|91779617|ref|YP_554825.1| putative forkhead-associated protein [Burkholderia xenovorans
LB400]
gi|91692277|gb|ABE35475.1| putative forkhead-associated protein [Burkholderia xenovorans
LB400]
Length = 860
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG L V DL STNGTF+ KRL + + G + FG H ++
Sbjct: 180 VNYISRRHAHIFLKGGELYVEDLGSTNGTFVGGKRLDESALPLVE-GDVVAFGGDHF-VY 237
Query: 165 RVSKIDTVEAPSKTE 179
RV T++ P + E
Sbjct: 238 RV----TLQKPPEVE 248
>gi|384484527|gb|EIE76707.1| hypothetical protein RO3G_01411 [Rhizopus delemar RA 99-880]
Length = 314
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
VT+GRLP D+ + ++S HA IQ + GD+ + DLDS +GT +++K++
Sbjct: 63 VTIGRLP-ICDIQMEHQSISRYHAVIQFNQDGDAF-IYDLDSAHGTKLNKKQVSPREYIP 120
Query: 148 ASPGSRITFGD-THLAMFRVSK 168
PG ++ FG+ T + +F K
Sbjct: 121 LKPGDQLKFGESTRVCIFESQK 142
>gi|162450784|ref|YP_001613151.1| hypothetical protein sce2512 [Sorangium cellulosum So ce56]
gi|161161366|emb|CAN92671.1| hypothetical protein sce2512 [Sorangium cellulosum So ce56]
Length = 1023
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
P + A +V +GR P RA +V+ +VS HA + D ++V D +ST+GT++ +R
Sbjct: 93 PGSLAPAPGQVVIGRDPGRASLVLQHPSVSSQHATVTL--DRMMVIDHNSTSGTYVGAQR 150
Query: 140 LRSGVVAVASPGSRITFG 157
+ +G P I FG
Sbjct: 151 IAAGSPTPIDPQGAIAFG 168
>gi|224119324|ref|XP_002331283.1| predicted protein [Populus trichocarpa]
gi|222873708|gb|EEF10839.1| predicted protein [Populus trichocarpa]
Length = 717
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 81 DAFEIASTEVTV-GRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDE 137
D FE+ + GR+ E D ++ T+S HA +Q + GD+ L DL ST+GTF+++
Sbjct: 102 DQFEVCEKGAYMFGRV-ELCDFILEHPTISRFHAVLQFKRNGDAYLY-DLGSTHGTFVNK 159
Query: 138 KRLRSGVVAVASPGSRITFG-DTHLAMFR 165
++ GV G I FG + L +F+
Sbjct: 160 SQVEKGVYVALHVGDVIRFGHSSRLYIFQ 188
>gi|76803517|gb|ABA55731.1| zeaxanthin epoxidase [Solanum tuberosum]
Length = 670
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 17/160 (10%)
Query: 37 IRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVT 91
R SE + D A ER WLL P G+G + + + V+
Sbjct: 510 CRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGTSGLEAIVLSRDEDVPCTIGSVS 569
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE---KRLRS--GVVA 146
+P ++ +V+P+ VS +HARI K + VTDL S +GT++ + +R R+
Sbjct: 570 HTNIPGKS-VVLPLPQVSEMHARISCKDGAFFVTDLQSEHGTWVTDNEGRRYRTSPNFPT 628
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVEAPSK--TEESEEK 184
P I FG A FRV ++ P K TE EE+
Sbjct: 629 RFHPSDVIEFGSDK-AAFRVK---AMKFPPKTTTERKEER 664
>gi|309810410|ref|ZP_07704244.1| ABC transporter, ATP-binding protein [Dermacoccus sp. Ellin185]
gi|308435650|gb|EFP59448.1| ABC transporter, ATP-binding protein [Dermacoccus sp. Ellin185]
Length = 854
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+P A + S +T+GR E ++V+ S HAR+ +GDS V DL S+NGT+I+
Sbjct: 192 VPQAMALPSGTITIGRGTEN-EIVVRDLLASRRHARLVPQGDSFAVEDLGSSNGTYINGA 250
Query: 139 RLRSGVV 145
R+ G +
Sbjct: 251 RITRGTL 257
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR------LRSGV 144
T+GR D+ I VS HA++ +G+ V DLDS+NGT++D +R LR G
Sbjct: 17 TIGR-GRDCDITIVDVDVSRRHAQVSAQGEGWQVRDLDSSNGTWVDGQRVHGYRDLRGGE 75
Query: 145 -VAVASP-GSRITF 156
V + P G+R+ F
Sbjct: 76 DVRLGGPRGTRVQF 89
>gi|229582325|ref|YP_002840724.1| FHA domain-containing protein [Sulfolobus islandicus Y.N.15.51]
gi|228013041|gb|ACP48802.1| FHA domain containing protein [Sulfolobus islandicus Y.N.15.51]
Length = 208
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 69 DTSHIGF-KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
+T + F K +P F+I + +++GR PE +VIP VS HA I + + L + DL
Sbjct: 109 NTPNPAFNKTKLPLDFDIFPS-ISIGRSPENV-IVIPDPEVSRKHAIISFENNELYLEDL 166
Query: 128 DSTNGTFIDEKRLRS---GVVAVASPGSRITFGDT 159
+STNGT+I + ++ G V V P S I G+
Sbjct: 167 NSTNGTYIYDGKVFQPVKGKVRV-QPNSIIKLGNN 200
>gi|403509374|ref|YP_006641012.1| FHA domain protein [Nocardiopsis alba ATCC BAA-2165]
gi|402803000|gb|AFR10410.1| FHA domain protein [Nocardiopsis alba ATCC BAA-2165]
Length = 170
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL-RS 142
++AS + +GR P+ + +VI SG HAR+ + V DL+STNGT++ +++L R
Sbjct: 92 DLASQPILIGRAPD-STLVITDDYASGRHARVYSENGRWFVEDLNSTNGTYLGQQKLNRP 150
Query: 143 GVVAVASPGSRITFGDTHLAM 163
+ V P I G T L +
Sbjct: 151 QPITVGQP---IRIGKTVLEL 168
>gi|148658033|ref|YP_001278238.1| FHA modulated ABC efflux pump ATPase/integral membrane protein
[Roseiflexus sp. RS-1]
gi|148570143|gb|ABQ92288.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Roseiflexus sp. RS-1]
Length = 899
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 83 FEIASTE--VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
FE+A + +++GR P+ D+VI VSG HARI+ G + + D+ STNG + KRL
Sbjct: 96 FEVALGQQPLSIGRAPDN-DIVITSRFVSGRHARIEPHGIAHQIVDIGSTNGLLFEGKRL 154
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAP 175
+ V + + GD F +AP
Sbjct: 155 PANTPHVLADSDVLRIGDPATGNFVTLTYRNPQAP 189
>gi|269793379|ref|YP_003312834.1| FHA domain-containing protein [Sanguibacter keddieii DSM 10542]
gi|269095564|gb|ACZ20000.1| FHA domain-containing protein [Sanguibacter keddieii DSM 10542]
Length = 160
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S+ + +GR P +V+ S HARI GD ++ DL STNGTFI +R+ S
Sbjct: 83 LTSSAILIGRAPS-CTLVLDDDYSSSRHARIFPSGDQWILEDLGSTNGTFIGNQRVSSP- 140
Query: 145 VAVASPGSRITFGDTHLAMFR 165
SPG+++ G + + + R
Sbjct: 141 -TPLSPGTQVRIGQSVVELQR 160
>gi|256391840|ref|YP_003113404.1| FHA domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256358066|gb|ACU71563.1| FHA domain containing protein [Catenulispora acidiphila DSM 44928]
Length = 234
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS-- 142
+++ ++ +GR P+ AD+ + VS HA I + G S + DLDSTNGTF+D +R+R+
Sbjct: 158 LSTRQIILGRSPD-ADVRLHDPGVSSRHAVI-RLGRSATIQDLDSTNGTFVDGRRVRNAD 215
Query: 143 ---GVVAVASPGSRITF 156
G V V G R+TF
Sbjct: 216 LHDGAVIVLG-GVRVTF 231
>gi|229578923|ref|YP_002837321.1| FHA domain-containing protein [Sulfolobus islandicus Y.G.57.14]
gi|228009637|gb|ACP45399.1| FHA domain containing protein [Sulfolobus islandicus Y.G.57.14]
Length = 208
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 69 DTSHIGF-KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
+T + F K +P F+I + +++GR PE +VIP VS HA I + + L + DL
Sbjct: 109 NTPNPAFNKTKLPLDFDIFPS-ISIGRSPENV-IVIPDPEVSRKHAIISFENNELYLEDL 166
Query: 128 DSTNGTFIDEKRLRS---GVVAVASPGSRITFGDT 159
+STNGT+I + ++ G V V P S I G+
Sbjct: 167 NSTNGTYIYDGKVFQPVKGKVRV-QPNSIIKLGNN 200
>gi|227830110|ref|YP_002831889.1| forkhead-associated protein [Sulfolobus islandicus L.S.2.15]
gi|284997527|ref|YP_003419294.1| forkhead-associated protein [Sulfolobus islandicus L.D.8.5]
gi|227456557|gb|ACP35244.1| Forkhead-associated protein [Sulfolobus islandicus L.S.2.15]
gi|284445422|gb|ADB86924.1| Forkhead-associated protein [Sulfolobus islandicus L.D.8.5]
Length = 208
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 69 DTSHIGF-KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
+T + F K +P F+I + +++GR PE +VIP VS HA I + + L + DL
Sbjct: 109 NTPNPAFNKTKLPLDFDIFPS-ISIGRSPENV-IVIPDPEVSRKHAIISFENNELYLEDL 166
Query: 128 DSTNGTFIDEKRLRS---GVVAVASPGSRITFGDT 159
+STNGT+I + ++ G V V P S I G+
Sbjct: 167 NSTNGTYIYDGKVFQPVKGKVRV-QPNSIIKLGNN 200
>gi|428208930|ref|YP_007093283.1| FHA modulated ABC efflux pump ATPase/integral membrane protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428010851|gb|AFY89414.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Chroococcidiopsis thermalis PCC 7203]
Length = 1005
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+T+GR E+ D+ I TVS HARI ++ + + DL+S+NGTF++ KR+
Sbjct: 254 NNLTIGR-DEQNDIAIDHPTVSRYHARISRQDGTFAIADLNSSNGTFVNGKRV 305
>gi|374297547|ref|YP_005047738.1| FHA domain-containing protein [Clostridium clariflavum DSM 19732]
gi|359827041|gb|AEV69814.1| FHA domain-containing protein [Clostridium clariflavum DSM 19732]
Length = 150
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S + T+GR ++ +VI +SG HA+I K + + DL S NGT+I++K L+SG
Sbjct: 66 LLSKDSTIGR-QDKNTIVIKDPYISGKHAQIIIKEGTYYIKDLGSKNGTYINDKPLKSGY 124
Query: 145 VAVASPGSRITFGDTHLAM 163
+ G +I G
Sbjct: 125 EWKLTNGDKIKMGQVEFLF 143
>gi|156742770|ref|YP_001432899.1| serine/threonine kinase [Roseiflexus castenholzii DSM 13941]
gi|156234098|gb|ABU58881.1| serine/threonine protein kinase with FHA domain [Roseiflexus
castenholzii DSM 13941]
Length = 1034
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+T GR+ ER D+V+P VS H R++ G ++VTDL S+NGT ++ + L S
Sbjct: 350 LTAGRV-ERNDIVLPGEGVSRHHLRLEWDGAQVMVTDLGSSNGTLLENQPLPS 401
>gi|359459108|ref|ZP_09247671.1| ABC transporter ATP-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 898
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + TEV +GR P+ ++ +VS HA+ + G++ +VTDL+S++GT+++ +L
Sbjct: 20 FPLTQTEVNLGRSPDNQLVLSDDLSVSRHHAQFKYSGNAYVVTDLNSSDGTYVNGIQLAP 79
Query: 143 GVVAVASPGSRITFGD 158
PG ++ G+
Sbjct: 80 HTPRSLVPGDQVRIGN 95
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
T+GR P DM I +VS HA+I+K+ S +V DL+STNGTF++ K++
Sbjct: 150 TLGRDPLN-DMEINHPSVSRFHAQIKKQDGSYIVLDLNSTNGTFLNGKQI 198
>gi|269217795|ref|ZP_06161649.1| putative FHA domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212730|gb|EEZ79070.1| putative FHA domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 173
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ + ++++ VGR P+ A +V+ + S HAR ++G V DLDSTNGT+I R+
Sbjct: 94 SLPLGTSQIIVGRSPDSA-LVLDDSYSSSRHARFYQEGGQWWVEDLDSTNGTYIGGNRI 151
>gi|89902699|ref|YP_525170.1| FHA domain-containing protein [Rhodoferax ferrireducens T118]
gi|89347436|gb|ABD71639.1| FHA domain containing protein [Rhodoferax ferrireducens T118]
Length = 225
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
T+GR P D+VI VSG HA +Q G + + DL+STNGT+++ K ++
Sbjct: 24 TLGRRPYN-DIVIDNLAVSGEHAVVQMTGGQVYLEDLNSTNGTYVNGKAIK 73
>gi|210633098|ref|ZP_03297665.1| hypothetical protein COLSTE_01573 [Collinsella stercoris DSM 13279]
gi|210159252|gb|EEA90223.1| FHA domain protein [Collinsella stercoris DSM 13279]
Length = 136
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ FEI + E+T+GR P + + TVS HA+I + +L+ DL S NGT++D
Sbjct: 46 NVFEIDAPEITIGRDPANT-IFLNDMTVSRSHAKILRNEAGVLIEDLGSLNGTWVD---- 100
Query: 141 RSGVVAVASP---GSRITFGDTHLAMFRVSKIDTVE 173
G + ++P GS + G T M+ S ++ +E
Sbjct: 101 --GAIVNSAPLHDGSSVQIG-TFTLMYHESTVERIE 133
>gi|197124097|ref|YP_002136048.1| FHA domain-containing protein [Anaeromyxobacter sp. K]
gi|196173946|gb|ACG74919.1| FHA domain containing protein [Anaeromyxobacter sp. K]
Length = 313
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + +GR PE A + I +S +HA +++ D + V DL+S NGTF+ + R+
Sbjct: 16 FALPEIPTVLGRSPE-AHLQIEDPWISSMHAMFERRADGVWVIDLESRNGTFLGDDRIAE 74
Query: 143 GVVAVASPGSRITFGDTHL 161
+ PG + FG T +
Sbjct: 75 ARI---EPGMVLRFGRTEV 90
>gi|119512634|ref|ZP_01631709.1| FHA domain containing protein [Nodularia spumigena CCY9414]
gi|119462705|gb|EAW43667.1| FHA domain containing protein [Nodularia spumigena CCY9414]
Length = 305
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GDS + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 244 VSRIHADIRVEGDSHYIEDVGSSNGTYINNSPLLPGNRHRLRPGDRISLGKGDLVTF 300
>gi|406961588|gb|EKD88259.1| FHA protein [uncultured bacterium]
Length = 146
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 80 PDA--FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
P+A + EV +GR E D+ IP +S HAR+ + + DL STNGT++++
Sbjct: 58 PEAVKYTFTQNEVIIGR-EETCDIFIPDPVISARHARLVFRNTHWWIEDLMSTNGTYLND 116
Query: 138 KRLRSGVVAVASPGSRI 154
+R+ S + + R+
Sbjct: 117 ERVESPAILINGDELRV 133
>gi|219847678|ref|YP_002462111.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Chloroflexus aggregans DSM 9485]
gi|219541937|gb|ACL23675.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Chloroflexus aggregans DSM 9485]
Length = 863
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+T+GR+ D+++ VS HA+I + +++ D+ STNGTF++ +R+ + V +
Sbjct: 169 EITIGRV--GCDIILNNPQVSRFHAQIDRTPGGVVLRDMGSTNGTFVNGQRVTAPV--ML 224
Query: 149 SPGSRITFGDTHLAMFRVSKID 170
PG I G L ++ V+++D
Sbjct: 225 KPGDVIQIGAFKL-VYNVTRLD 245
>gi|452821406|gb|EME28437.1| hypothetical protein Gasu_41270 [Galdieria sulphuraria]
Length = 373
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I +GR P+ D+ + +VS LHA IQ G + + D++ST+GTF+++ +L
Sbjct: 39 IGKPYFLIGRTPD-CDVQLEHPSVSRLHAVIQSDGSQVYLYDVESTHGTFLNKTKLEPKQ 97
Query: 145 VAVASPGSRITFG 157
+ G + FG
Sbjct: 98 YYLFHTGELLRFG 110
>gi|302869558|ref|YP_003838195.1| forkhead-associated protein [Micromonospora aurantiaca ATCC 27029]
gi|315503980|ref|YP_004082867.1| fha domain containing protein [Micromonospora sp. L5]
gi|302572417|gb|ADL48619.1| Forkhead-associated protein [Micromonospora aurantiaca ATCC 27029]
gi|315410599|gb|ADU08716.1| FHA domain containing protein [Micromonospora sp. L5]
Length = 148
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + +GR P AD+V+ +S HA ++ + +++TDL STNGT++++ R+ +
Sbjct: 23 FRVGQDAQVIGRAPT-ADIVLADPHLSRRHATVRATPEGVMLTDLGSTNGTWLNDTRV-T 80
Query: 143 GVVAVASPGSRITFGDTHLAMFR--VSKIDTV 172
G VA+A G + G T L ++ V++ D V
Sbjct: 81 GSVAIAD-GDVVRLGRTDLRLYDPGVARTDPV 111
>gi|196229519|ref|ZP_03128384.1| serine/threonine protein kinase with FHA domain [Chthoniobacter
flavus Ellin428]
gi|196226751|gb|EDY21256.1| serine/threonine protein kinase with FHA domain [Chthoniobacter
flavus Ellin428]
Length = 618
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+ +GR E AD+ I +S HAR+ K L+ DLDS NGTFI+ +R+ G V V
Sbjct: 26 DYVIGRGVE-ADIRIDTPLISRAHARLTIKERECLIEDLDSANGTFINGERI--GSVTVL 82
Query: 149 SPGSRITFG 157
P I G
Sbjct: 83 RPEEHIMLG 91
>gi|87307738|ref|ZP_01089881.1| hypothetical protein DSM3645_22666 [Blastopirellula marina DSM
3645]
gi|87289352|gb|EAQ81243.1| hypothetical protein DSM3645_22666 [Blastopirellula marina DSM
3645]
Length = 558
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+A + +GR PE D+++ VS HA+I +K LL+ DL S NGTF+++ + S
Sbjct: 19 LAGEKFVMGRHPE-CDILVDAGAVSRHHAQITRKNQDLLIEDLGSRNGTFVNDTAINS 75
>gi|94971355|ref|YP_593403.1| FHA domain-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94553405|gb|ABF43329.1| FHA domain containing protein [Candidatus Koribacter versatilis
Ellin345]
Length = 228
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ +++T VT+GRLP+ D+ I +VSG HA+I + V D STNGT+++ ++L
Sbjct: 16 YALSNTAVTIGRLPDN-DIHIDDLSVSGHHAKIVLEDGQYAVHDESSTNGTYVNGQKL-- 72
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSK 168
AV + + G HL +F K
Sbjct: 73 -AYAVLTNEDSVLIG-RHLLVFEEEK 96
>gi|434405029|ref|YP_007147914.1| FHA domain-containing protein [Cylindrospermum stagnale PCC 7417]
gi|428259284|gb|AFZ25234.1| FHA domain-containing protein [Cylindrospermum stagnale PCC 7417]
Length = 210
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P + D+V+ TVSGLH I + + +L S N +D K+L G + +
Sbjct: 52 VRIGRDPRQCDIVVTNPTVSGLHVEIFFHNQQQCFYIRNLRSPNPPLVDGKQLVQGEIPL 111
Query: 148 ASPGSRITFGDTHLAMFRVSKIDTVEA 174
S GS I G L + V+ I+++ A
Sbjct: 112 -SEGSLIYLGQMKLQVTAVT-INSIPA 136
>gi|257065380|ref|YP_003145052.1| FHA domain-containing protein [Slackia heliotrinireducens DSM
20476]
gi|256793033|gb|ACV23703.1| FHA domain-containing protein [Slackia heliotrinireducens DSM
20476]
Length = 137
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ VGR P AD+VI + VSG HAR G +L V DL S NGT ++ +R+
Sbjct: 64 IIVGRAPG-ADIVIGASYVSGRHARFSLMGQNLFVEDLGSRNGTAVNGQRI 113
>gi|334564756|ref|ZP_08517747.1| hypothetical protein CbovD2_09291 [Corynebacterium bovis DSM 20582]
Length = 101
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EVT+GR +V+ S HAR+ G V DLDS NGTF+D LR
Sbjct: 28 EVTIGR-SAACTLVVEDDFASASHARLSNTGSGWYVEDLDSRNGTFLDG--LRIDQPESL 84
Query: 149 SPGSRITFGDTHLAM 163
S G I G TH+ M
Sbjct: 85 SAGQEIRIGQTHVRM 99
>gi|158335334|ref|YP_001516506.1| ABC transporter ATP-binding protein [Acaryochloris marina
MBIC11017]
gi|158305575|gb|ABW27192.1| ABC transporter, ATP-binding, FHA domain protein [Acaryochloris
marina MBIC11017]
Length = 898
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
T+GR P DM I +VS HA+I+K+ S +V DL+STNGTF++ K++
Sbjct: 150 TLGRDPLN-DMEINHPSVSRFHAQIKKQDGSYIVLDLNSTNGTFLNGKQI 198
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + TEV +GR P+ ++ +VS HA+ + G++ +VTDL+S++GT+++ +L
Sbjct: 20 FPLTQTEVNLGRSPDNQLVLSDDLSVSRHHAQFKYSGNAYVVTDLNSSDGTYVNGIQLAP 79
Query: 143 GVVAVASPGSRITFGD 158
PG ++ G+
Sbjct: 80 HTPRSLVPGDQVRIGN 95
>gi|115377211|ref|ZP_01464423.1| kinase associated protein phosphatase [Stigmatella aurantiaca
DW4/3-1]
gi|310821198|ref|YP_003953556.1| FHA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115365794|gb|EAU64817.1| kinase associated protein phosphatase [Stigmatella aurantiaca
DW4/3-1]
gi|309394270|gb|ADO71729.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 175
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHA--RIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
S E+ +GRLP+ D+V+ +VS HA R ++TD+ S NGT I+ + +R
Sbjct: 83 SDELHIGRLPDN-DLVVDDPSVSKRHAVLRWDALAHRCMLTDMGSRNGTLINAEYIRDA- 140
Query: 145 VAVASPGSRITFGDTHLAMF 164
A+ S G ++FGDT
Sbjct: 141 NALVSDGDMLSFGDTEFCFL 160
>gi|86158240|ref|YP_465025.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774751|gb|ABC81588.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 121
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDEKRLRSGVV 145
S +T+GR ++AD+ + S LHARI ++ D + +TDL STNGTF++ R+RS V+
Sbjct: 34 SDGLTIGR-ADQADLPVDDRGASRLHARIARRQDGAWTITDLGSTNGTFVNGVRVRSAVL 92
>gi|406039973|ref|ZP_11047328.1| hypothetical protein AursD1_09158 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 217
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
++ VGR + AD+V+ A VS HA + K D L V DL+S+NGTF+++ R+ V
Sbjct: 22 DLLVGR-GQDADLVLQAAEVSRKHAALLLKDDQLWVQDLNSSNGTFVNDLRIEQEV 76
>gi|146283288|ref|YP_001173441.1| FHA domain-containing protein [Pseudomonas stutzeri A1501]
gi|339495073|ref|YP_004715366.1| FHA domain-containing protein [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|386021714|ref|YP_005939738.1| FHA domain-containing protein [Pseudomonas stutzeri DSM 4166]
gi|145571493|gb|ABP80599.1| FHA domain protein [Pseudomonas stutzeri A1501]
gi|327481686|gb|AEA84996.1| FHA domain-containing protein [Pseudomonas stutzeri DSM 4166]
gi|338802445|gb|AEJ06277.1| FHA domain-containing protein [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 279
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
RWLLQ V + H + I + +T GR + ++ A +S HA K
Sbjct: 106 RWLLQVVKGENQGH---------KYHITGS-MTFGR-SVKCELCFSDAELSRRHAEFFLK 154
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
GD L V DL S NG ++ +++ + AV PG +I G+T L
Sbjct: 155 GDVLEVKDLASANGVLVNRQKVST---AVLQPGDQIQLGNTTL 194
>gi|434392377|ref|YP_007127324.1| FHA domain containing protein [Gloeocapsa sp. PCC 7428]
gi|428264218|gb|AFZ30164.1| FHA domain containing protein [Gloeocapsa sp. PCC 7428]
Length = 244
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ V D+ S+NGT+I+ K L+ G G RI G L F
Sbjct: 183 VSRIHADIRVEGDAYFVEDVGSSNGTYINRKPLQPGDRHRLRAGDRIALGKGDLVTF 239
>gi|427708460|ref|YP_007050837.1| FHA domain-containing protein [Nostoc sp. PCC 7107]
gi|427360965|gb|AFY43687.1| FHA domain containing protein [Nostoc sp. PCC 7107]
Length = 267
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ V D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 206 VSRIHADIRVEGDAYYVEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 262
>gi|255565190|ref|XP_002523587.1| zeaxanthin epoxidase, putative [Ricinus communis]
gi|223537149|gb|EEF38782.1| zeaxanthin epoxidase, putative [Ricinus communis]
Length = 665
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 24/170 (14%)
Query: 36 AIRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSH---IGFKVPMPDAFEIAS 87
+ R S+ S T D A ER W L P GD + +P S
Sbjct: 506 SCRLSDKASDQLQTWFEDDNALERALNGEWFLLPFGDDAVQEPICLSRDENIPCMVGSES 565
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLR--S 142
E G+ +VI VS +HARI K V DL S +GTFI D +R R
Sbjct: 566 QEDFPGK-----SIVISSPQVSKMHARISYKDGGFYVIDLQSEHGTFITDNDGRRSRVPP 620
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSS 192
+ P I FG A FRV +++P+K +EKG + L S
Sbjct: 621 NFPTLFHPSEAIEFGSAGKAKFRVK---VMKSPAKI---KEKGGNEILQS 664
>gi|162450787|ref|YP_001613154.1| hypothetical protein sce2515 [Sorangium cellulosum So ce56]
gi|161161369|emb|CAN92674.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum So ce56]
Length = 724
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EV GR + + VSG HA ++ + L V D +S NGT+++ +R+ + V +
Sbjct: 647 EVRAGRDGASCLIALSEPRVSGTHASVKLEAGQLFVRDENSNNGTYVNGQRIAAAVWTLV 706
Query: 149 SPGSRITFGDTHLAM 163
PG+ + FG ++
Sbjct: 707 PPGASLRFGPVEFSV 721
>gi|405984127|ref|ZP_11042431.1| hypothetical protein HMPREF9451_01549 [Slackia piriformis YIT
12062]
gi|404388263|gb|EJZ83346.1| hypothetical protein HMPREF9451_01549 [Slackia piriformis YIT
12062]
Length = 137
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ VGR P AD+VI + VS HAR G +L V DL STNGT ++ +R+
Sbjct: 64 IIVGRAPG-ADIVIGASYVSARHARFSIMGANLFVEDLGSTNGTAVNGRRI 113
>gi|373253318|ref|ZP_09541436.1| FHA domain-containing protein [Nesterenkonia sp. F]
Length = 167
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 66 GDGDTSHIGFKVPMP------------DAFEIASTEVTVGRLPERADMVIPVATVSGLHA 113
G T H G + P P E+ S + +GR E +V+ SG HA
Sbjct: 59 GSTSTPHAGVQRPRPRTLAVTDGPLAGTTLELGSAPIMMGRAQE-CTLVLDDDYASGKHA 117
Query: 114 RIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
R+ +G + DL STNGT++ E++L + PG I G T L +
Sbjct: 118 RLFPQGSRWFLEDLGSTNGTWLAEEQLTR--ASTVEPGDPIRIGKTVLEL 165
>gi|354558668|ref|ZP_08977922.1| FHA domain containing protein [Desulfitobacterium metallireducens
DSM 15288]
gi|353545730|gb|EHC15180.1| FHA domain containing protein [Desulfitobacterium metallireducens
DSM 15288]
Length = 267
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + + VGR + ++V+ VS H RI + G V DL STNGT ++ +R+
Sbjct: 188 FPLKEDVIYVGRHGQ-CEIVLKDVEVSRRHLRISRMGTGWEVDDLGSTNGTCLNSQRVTK 246
Query: 143 GVVAVASPGSRITFGDTHLAMFR 165
++ PG RI G T +A+ R
Sbjct: 247 QILV---PGDRIEIGQTVMALRR 266
>gi|296454175|ref|YP_003661318.1| FHA domain containing protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296183606|gb|ADH00488.1| FHA domain containing protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 147
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+TVGR P RAD+++ +TVS HA ++ V D S NGT+++ +R+ A
Sbjct: 68 EITVGRDP-RADILLDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQ---ASL 123
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S I
Sbjct: 124 KNGDEIMIGKFRLVFFTKSAI 144
>gi|442320000|ref|YP_007360021.1| Pkn9 associate protein 1 [Myxococcus stipitatus DSM 14675]
gi|441487642|gb|AGC44337.1| Pkn9 associate protein 1 [Myxococcus stipitatus DSM 14675]
Length = 553
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
+D+ + ++S HA++ +KGD + + DL S NGTFI+ R+ V ++ G IT G+
Sbjct: 124 SDLRLQHPSISRRHAQVTRKGDQIFLKDLGSQNGTFINRNRVTDEVEVMS--GDEITLGN 181
Query: 159 THLAMFRV 166
AM R+
Sbjct: 182 ---AMMRL 186
>gi|184201708|ref|YP_001855915.1| hypothetical protein KRH_20620 [Kocuria rhizophila DC2201]
gi|183581938|dbj|BAG30409.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 171
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
++++ S V +GR PE A + + SG HAR+ +G + DL STNGTF+ ++L
Sbjct: 91 SYQLGSAPVMLGRSPE-ATVPLEDDYASGRHARLFPQGSRWFLEDLGSTNGTFVQGQKL- 148
Query: 142 SGVVAVASPGSRITFGDTHLAM 163
S AV PG + G T + +
Sbjct: 149 SRATAV-DPGVQFRVGRTVMEL 169
>gi|427736135|ref|YP_007055679.1| FHA domain-containing protein [Rivularia sp. PCC 7116]
gi|427371176|gb|AFY55132.1| FHA domain-containing protein [Rivularia sp. PCC 7116]
Length = 194
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P+R D+V+ T+SGLH I + + +L N +D K+L G AV
Sbjct: 31 VRLGRDPQRCDIVLSHPTISGLHVEIFFNSQQKCFHIRNLRHKNPPLVDGKQL-VGEDAV 89
Query: 148 ASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKG-DSPPLSSA 193
+ GS + G L + +S P+ E + G +S P++ A
Sbjct: 90 LNEGSILCLGQMQLKVINISIPQVNSFPATILEPPKPGQNSQPVTPA 136
>gi|381179962|ref|ZP_09888807.1| FHA domain containing protein [Treponema saccharophilum DSM 2985]
gi|380768058|gb|EIC02052.1| FHA domain containing protein [Treponema saccharophilum DSM 2985]
Length = 296
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+T+GR + A +VIP VS HAR+ +G L V D+ S NG ++ KR+ G A+
Sbjct: 116 LTIGRDIDNA-LVIPDPMVSRRHARLFFEGGYLFVEDVGSKNGLLVNGKRVPPGGRAIVC 174
Query: 150 PGSRITFGDTHLAM 163
GS I G + ++
Sbjct: 175 DGSVIQIGKSEFSV 188
>gi|383454937|ref|YP_005368926.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
gi|380728939|gb|AFE04941.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
Length = 255
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 82 AFEIASTEVTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
AF + + +GR E+ D+ P VSG HA +Q +GD L+V D+ S+NGTFI
Sbjct: 173 AFPLKDGDNLLGR--EQGDIAFPTDGFVSGRHALLQVRGDRLMVRDVGSSNGTFI 225
>gi|308273457|emb|CBX30059.1| hypothetical protein N47_D28680 [uncultured Desulfobacterium sp.]
Length = 236
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ +GR E ++VI VSG HA+I G+ L+TDL S NG+F++E+ + S +
Sbjct: 24 LNIGR-REDNNIVIDNLAVSGHHAKIDSVGEGFLLTDLQSKNGSFVNEQYVSSHWL---Q 79
Query: 150 PGSRITFGDTHLAMFRVSKIDT 171
G IT G H +F+ +T
Sbjct: 80 HGDIITIG-KHNIIFKYQDNET 100
>gi|86160068|ref|YP_466853.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776579|gb|ABC83416.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 334
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + +GR PE A + I +S +HA +++ D + V DL+S NGTF+ + R+
Sbjct: 35 FALPEIPTVLGRSPE-AHLQIEDPWISSMHAMFERRADGVWVIDLESRNGTFLGDDRIAE 93
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG + FG T +
Sbjct: 94 ---ARIEPGMVLRFGRTEV 109
>gi|392570474|gb|EIW63647.1| Pkinase-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 666
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 63 QPVGDGDTSHIGFKVPMPDA-----FEIASTEVTVGRLPE--RADMVIPVATVSGLHARI 115
QP D GF +P F+ + +GR E + D+++P +S H I
Sbjct: 23 QPDYIVDVHLWGFLIPCSSNLRRIDFQKIKPKYMIGRNAEQTKNDIILPGMKISNFHCAI 82
Query: 116 QKKGDSLL-----VTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
+ GD + VTDL S+NGTFI+ ++ G + G+ I FG
Sbjct: 83 EWDGDETIRSAVKVTDL-SSNGTFINGDKIGKGHFKILRDGNEIAFG 128
>gi|357482907|ref|XP_003611740.1| Zeaxanthin epoxidase [Medicago truncatula]
gi|355513075|gb|AES94698.1| Zeaxanthin epoxidase [Medicago truncatula]
Length = 350
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 21/148 (14%)
Query: 36 AIRASEADSSTTTTTTSTDVAAER-----WLLQPVGD--GDTSHIGFKVPMPDAFEIAST 88
R S+ S T D A ER W+L P GD G I + I +T
Sbjct: 186 CCRLSDKASDQLHTWFEDDDALERTINGEWILLPCGDVPGHVKPISLNQDDTKPYIIGNT 245
Query: 89 EVTVGRLPERAD-----MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E+ D + IP+ VS LHARI K + +TDL S +GT+I + R
Sbjct: 246 SAMS---IEQEDYPGSLITIPLPQVSQLHARINFKDGAFFLTDLRSQHGTWITDNEGRRY 302
Query: 144 VV-----AVASPGSRITFGDTHLAMFRV 166
+V A P I FG + A +RV
Sbjct: 303 MVSPNYPARIRPSHVIEFG-CNQASYRV 329
>gi|225387831|ref|ZP_03757595.1| hypothetical protein CLOSTASPAR_01601 [Clostridium asparagiforme
DSM 15981]
gi|225046074|gb|EEG56320.1| hypothetical protein CLOSTASPAR_01601 [Clostridium asparagiforme
DSM 15981]
Length = 473
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 89 EVTVGRLPERADMVIPVAT--VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
E +GR P+R D V P T +SGLH I + L VTD+ ST GT ++ +L
Sbjct: 388 ETRMGRDPQRCDFVYPAGTKGISGLHCIISQGPAGLTVTDVGSTWGTTVNGTKLVPNQPC 447
Query: 147 VASPGSRITFG 157
+ G RI G
Sbjct: 448 PLNIGDRICLG 458
>gi|238061962|ref|ZP_04606671.1| FHA domain-containing protein [Micromonospora sp. ATCC 39149]
gi|237883773|gb|EEP72601.1| FHA domain-containing protein [Micromonospora sp. ATCC 39149]
Length = 267
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ ST + G ++A++ +P +S HAR+ G +++TDL STNGT ++ +R
Sbjct: 189 LQMGSTVIGRG---DQANLRLPDVGISRRHARLDFDGGQVVLTDLGSTNGTMVNGQR--- 242
Query: 143 GVVAVA-SPGSRITFGDTHLAMFRV 166
V AVA +PG I G T L FRV
Sbjct: 243 -VSAVALNPGDMIQLGTTTLT-FRV 265
>gi|300867741|ref|ZP_07112386.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Oscillatoria sp. PCC 6506]
gi|300334324|emb|CBN57558.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Oscillatoria sp. PCC 6506]
Length = 893
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 32/109 (29%)
Query: 64 PVGDGDTSHIG-----FKV-----PMPDAFEIASTEVTVGRLPERA-------------- 99
P+ DGDT IG FK+ P+P A + + E+
Sbjct: 83 PLADGDTIRIGGIELRFKIAAHIAPIPVAANQVTAATVAANMGEQTVFTAHLDLQGRNAF 142
Query: 100 --------DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D+ I TVS HARI+++ S++V DL STNGT+++ K +
Sbjct: 143 TIGRDAQNDIPINHPTVSRFHARIERRNGSVVVKDLTSTNGTYVNGKEI 191
>gi|282900958|ref|ZP_06308891.1| FHA domain protein containing protein [Cylindrospermopsis
raciborskii CS-505]
gi|281194049|gb|EFA69013.1| FHA domain protein containing protein [Cylindrospermopsis
raciborskii CS-505]
Length = 255
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 194 VSRIHADIRVEGDAYYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 250
>gi|328703332|ref|XP_003242172.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-B-like [Acyrthosiphon
pisum]
Length = 321
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 98 RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
++ +VI +SG+H+ I+ + D ++ D+DS GT+++ K++ V V G I F
Sbjct: 41 KSSIVIEELYISGIHSTIRYENDKFILKDIDSCTGTYLNYKKISKEV--VLQNGDLIAFK 98
Query: 158 DTHLAMFRVSKIDTVEAPSKTEESEEKG 185
D V K + P K EE+
Sbjct: 99 DKSKTWDFVYKFCLLSNPKKKLRLEEEN 126
>gi|156743547|ref|YP_001433676.1| FHA modulated ABC efflux pump ATPase/integral membrane protein
[Roseiflexus castenholzii DSM 13941]
gi|156234875|gb|ABU59658.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Roseiflexus castenholzii DSM 13941]
Length = 903
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 83 FEI--ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
FE+ +++GR P+ D+VI VSG HARI+ G + + D+ STNG KRL
Sbjct: 100 FEVTLGQQSLSIGRAPDN-DIVITSRFVSGRHARIEPHGVAHQIVDIGSTNGLLFKGKRL 158
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
+ V + + GD F +AP + +E
Sbjct: 159 PANAPHVLADSDVLRIGDPATGNFVTLTYRNPQAPKVQQAAE 200
>gi|430743439|ref|YP_007202568.1| FHA domain-containing protein [Singulisphaera acidiphila DSM 18658]
gi|430015159|gb|AGA26873.1| FHA domain-containing protein [Singulisphaera acidiphila DSM 18658]
Length = 201
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
TVGR + + I + VS H + +K LLV DL S+NGTF++ KR++ V P
Sbjct: 25 TVGRQ-DDCQLRIKSSQVSRKHCELFEKKGLLLVKDLGSSNGTFVNGKRIQEQ--RVLEP 81
Query: 151 GSRITFGDTHLAMFRVSKI 169
G +T G +F+V+K+
Sbjct: 82 GDELTIGQL---LFKVAKV 97
>gi|183601667|ref|ZP_02963037.1| possible signal transduction protein [Bifidobacterium animalis
subsp. lactis HN019]
gi|219683800|ref|YP_002470183.1| signal transduction protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190834|ref|YP_002968228.1| hypothetical protein Balac_0798 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196240|ref|YP_002969795.1| hypothetical protein Balat_0798 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384191081|ref|YP_005576829.1| putative signal transduction protein GarA [Bifidobacterium animalis
subsp. lactis BB-12]
gi|384192226|ref|YP_005577973.1| signal transduction protein [Bifidobacterium animalis subsp. lactis
CNCM I-2494]
gi|384193828|ref|YP_005579574.1| FHA domain protein [Bifidobacterium animalis subsp. lactis BLC1]
gi|384195392|ref|YP_005581137.1| hypothetical protein BalV_0770 [Bifidobacterium animalis subsp.
lactis V9]
gi|386866971|ref|YP_006279965.1| hypothetical protein BANAN_03950 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|387820702|ref|YP_006300745.1| hypothetical protein W7Y_0801 [Bifidobacterium animalis subsp.
lactis B420]
gi|387822376|ref|YP_006302325.1| hypothetical protein W91_0822 [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423679361|ref|ZP_17654237.1| hypothetical protein FEM_12249 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183219273|gb|EDT89914.1| possible signal transduction protein [Bifidobacterium animalis
subsp. lactis HN019]
gi|219621450|gb|ACL29607.1| possible signal transduction protein [Bifidobacterium animalis
subsp. lactis AD011]
gi|240249226|gb|ACS46166.1| hypothetical protein Balac_0798 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250794|gb|ACS47733.1| hypothetical protein Balat_0798 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178573|gb|ADC85819.1| putative signal transduction protein GarA [Bifidobacterium animalis
subsp. lactis BB-12]
gi|295793823|gb|ADG33358.1| hypothetical protein BalV_0770 [Bifidobacterium animalis subsp.
lactis V9]
gi|340364963|gb|AEK30254.1| Hypothetical signal transduction protein [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|345282687|gb|AEN76541.1| FHA domain protein [Bifidobacterium animalis subsp. lactis BLC1]
gi|366041472|gb|EHN17967.1| hypothetical protein FEM_12249 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|385701054|gb|AFI63002.1| hypothetical protein BANAN_03950 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|386653403|gb|AFJ16533.1| hypothetical protein W7Y_0801 [Bifidobacterium animalis subsp.
lactis B420]
gi|386654984|gb|AFJ18113.1| hypothetical protein W91_0822 [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 146
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EVTVGR P RAD+++ +TVS HA +++ + V D S NGT+++ +R+ A
Sbjct: 67 EVTVGRDP-RADILLDDSTVSRQHAVFRRENGAYTVIDAGSLNGTYVNRQRVDK---ATL 122
Query: 149 SPGSRITFGDTHLAMFRVSKIDTV 172
G I G L F S + +
Sbjct: 123 KNGDEIMIGKFRLIYFTNSAVRNI 146
>gi|449134866|ref|ZP_21770332.1| diguanylate phosphodiesterase [Rhodopirellula europaea 6C]
gi|448886493|gb|EMB16898.1| diguanylate phosphodiesterase [Rhodopirellula europaea 6C]
Length = 371
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 52 STDVAAERWLLQ-PVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSG 110
ST V + W L P+G GDT P+ A VGR A M + TVSG
Sbjct: 15 STCVHEDVWFLSGPMGPGDTLQ---HTPIDQA------PFIVGRKSGVA-MKLQFRTVSG 64
Query: 111 LHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
HA ++ + L+V DL+STNGT+++ KR+ VV
Sbjct: 65 NHAELKIEDGKLIVRDLESTNGTYLNGKRVTEPVV 99
>gi|418292636|ref|ZP_12904570.1| FHA domain-containing protein [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379064053|gb|EHY76796.1| FHA domain-containing protein [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 285
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
RWLLQ V + H + I + +T GR + ++ A +S HA K
Sbjct: 106 RWLLQVVKGENQGH---------KYHITGS-MTFGR-SVKCELCFSDAELSRRHAEFYLK 154
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
GD L V DL S NG ++ +++ + AV PG +I G+T L
Sbjct: 155 GDVLEVKDLASANGLLVNREKVTT---AVLQPGDQIQLGNTTL 194
>gi|330464944|ref|YP_004402687.1| FHA domain-containing protein [Verrucosispora maris AB-18-032]
gi|328807915|gb|AEB42087.1| FHA domain-containing protein [Verrucosispora maris AB-18-032]
Length = 253
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ ST + G ++A++ +P +S HAR+ G +++TDL STNGT ++ +R
Sbjct: 175 LQMGSTVIGRG---DQANLRLPDVGISRRHARLDFDGGQVVLTDLGSTNGTMVNGQR--- 228
Query: 143 GVVAVA-SPGSRITFGDTHLAMFRV 166
V AVA +PG I G T L FRV
Sbjct: 229 -VSAVALNPGDMIQLGTTTLT-FRV 251
>gi|158335614|ref|YP_001516786.1| ABC transporter ATP-binding protein [Acaryochloris marina
MBIC11017]
gi|158305855|gb|ABW27472.1| ABC transporter, ATP-binding protein [Acaryochloris marina
MBIC11017]
Length = 999
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++T GR PE VI VS H +I K S V DL S+NGTF+D +++RS
Sbjct: 240 QLTFGRDPENTH-VIDHPVVSRFHTQIISKEGSWFVEDLHSSNGTFVDGQQIRSQ--QPL 296
Query: 149 SPGSRITFG 157
PGS I G
Sbjct: 297 HPGSTIRIG 305
>gi|377573366|ref|ZP_09802429.1| hypothetical protein MOPEL_021_00300 [Mobilicoccus pelagius NBRC
104925]
gi|377537909|dbj|GAB47594.1| hypothetical protein MOPEL_021_00300 [Mobilicoccus pelagius NBRC
104925]
Length = 154
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + S T GR P+ +D+ + TVS HA ++ GD+ +V D+ S NGT+++ +R+ S
Sbjct: 71 FLLDSAMTTTGRHPD-SDIFLDDVTVSRKHAVFEQDGDTFVVRDVGSLNGTYVNRERIDS 129
Query: 143 GVV 145
V+
Sbjct: 130 AVL 132
>gi|431926495|ref|YP_007239529.1| FHA domain-containing protein [Pseudomonas stutzeri RCH2]
gi|431824782|gb|AGA85899.1| FHA domain-containing protein [Pseudomonas stutzeri RCH2]
Length = 284
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
RWLLQ V + H + I + +T GR + ++ A +S HA K
Sbjct: 106 RWLLQVVKGENQGH---------KYHITGS-MTFGR-SVKCELCFSDAELSRRHAEFYLK 154
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
GD L V DL S NG ++ +++ + AV PG +I G+T L
Sbjct: 155 GDVLEVKDLASANGLLVNREKVTT---AVLQPGDQIQLGNTTL 194
>gi|209522457|ref|ZP_03271057.1| FHA domain containing protein [Burkholderia sp. H160]
gi|209497109|gb|EDZ97364.1| FHA domain containing protein [Burkholderia sp. H160]
Length = 272
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 99 ADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
D+++P+ AT+S HA I + + D STNGT+ D++ + S V + G+RI G
Sbjct: 157 CDVLLPIDATMSNEHALILCRAGRYELFDNRSTNGTYADDQFVESAGVMLRD-GARIKTG 215
Query: 158 DTHLAMFRVSKIDTVEAPSKT 178
DT + +FR +ID+ +AP T
Sbjct: 216 DT-VWLFR--QIDSKDAPEHT 233
>gi|377564801|ref|ZP_09794112.1| hypothetical protein GOSPT_062_00120 [Gordonia sputi NBRC 100414]
gi|377527955|dbj|GAB39277.1| hypothetical protein GOSPT_062_00120 [Gordonia sputi NBRC 100414]
Length = 154
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G+ P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRITLGQQPVLIGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RLRSGV-VAVASP 150
++ + V V +++P
Sbjct: 130 KVTTAVRVPLSTP 142
>gi|444433432|ref|ZP_21228573.1| hypothetical protein GS4_33_01090 [Gordonia soli NBRC 108243]
gi|443885817|dbj|GAC70294.1| hypothetical protein GS4_33_01090 [Gordonia soli NBRC 108243]
Length = 845
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
T+GR P+ D+V+ S HAR+ + D LL+ DL S NGTF++ +R+
Sbjct: 215 TIGRTPDN-DIVVSDVLASRHHARVSARPDGLLIEDLGSVNGTFVNGRRI 263
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 67 DGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTD 126
DG T +G A+ VT+GR PE D+V+ VS H I+ +G ++ D
Sbjct: 14 DGATHQLG-----------ATPRVTIGRTPEN-DIVVNHPLVSRRHLAIEWRGSGWVLAD 61
Query: 127 LDSTNGTFIDEKRL 140
+ STNG F+ +RL
Sbjct: 62 VGSTNGFFVGGQRL 75
>gi|427713297|ref|YP_007061921.1| multidrug ABC transporter ATPase [Synechococcus sp. PCC 6312]
gi|427377426|gb|AFY61378.1| ABC-type multidrug transport system, ATPase component
[Synechococcus sp. PCC 6312]
Length = 1031
Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 77 VPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
VP+ + + E T+GR P + I TVS A+I+ +G ++TDL S+NGT+I+
Sbjct: 252 VPIKTLSLVGNVEFTIGRDPAN-HLQISHPTVSRFQAKIEHRGREFILTDLGSSNGTYIN 310
Query: 137 EKRL 140
+R+
Sbjct: 311 GRRV 314
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
I+ + +T+GR + D+V+ VS HARI++ ++ D+ S GT +++ +L+
Sbjct: 17 GLNISPSILTIGRAADN-DLVLNDIAVSRYHARIERVEAGYVLVDVGSKAGTRLNDAKLQ 75
Query: 142 SGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
S + G ITFG++ L FR+ E + T+ E
Sbjct: 76 SNTPHPLTDGDLITFGNSAL-RFRLRWQHQDEGQTTTQSDE 115
>gi|281208770|gb|EFA82945.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 519
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKK-GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
+GRL + ++ IP +S H R+ K D +L+ DL STNGTFI+ K + G + V
Sbjct: 98 LGRL-KTCNITIPETIISAKHCRLFKSSNDCILIQDL-STNGTFINGKMIGRGNLEVVKN 155
Query: 151 GSRITFG 157
G RI+
Sbjct: 156 GDRISLA 162
>gi|302864602|ref|YP_003833239.1| forkhead-associated protein [Micromonospora aurantiaca ATCC 27029]
gi|315500895|ref|YP_004079782.1| fha domain containing protein [Micromonospora sp. L5]
gi|302567461|gb|ADL43663.1| Forkhead-associated protein [Micromonospora aurantiaca ATCC 27029]
gi|315407514|gb|ADU05631.1| FHA domain containing protein [Micromonospora sp. L5]
Length = 253
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ ST + G ++A++ +P +S HAR+ G +++TDL STNGT ++ +R
Sbjct: 175 LQMGSTVIGRG---DQANLRLPDVGISRRHARLDFDGGQVVLTDLGSTNGTMVNGQR--- 228
Query: 143 GVVAVA-SPGSRITFGDTHLAMFRV 166
V AVA +PG I G T L FRV
Sbjct: 229 -VSAVALNPGDMIQLGTTTLT-FRV 251
>gi|170782283|ref|YP_001710616.1| hypothetical protein CMS_1918 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156852|emb|CAQ02020.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 353
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFI-----DEKRLRSGVVAVASPGSRITFGD 158
P+ +SG H I++ ++VTDLDSTNGT + + LR G V PG+RI GD
Sbjct: 284 PLGEISGTHLGIRQDSGVVVVTDLDSTNGTVVLAPGAERLALRPGESLVVVPGTRIDIGD 343
>gi|87307344|ref|ZP_01089489.1| hypothetical protein DSM3645_17515 [Blastopirellula marina DSM
3645]
gi|87290084|gb|EAQ81973.1| hypothetical protein DSM3645_17515 [Blastopirellula marina DSM
3645]
Length = 401
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 90 VTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+ VGR A+ +IP VSGLH ++ D L++TDL S NGT+++ +RL V
Sbjct: 25 IKVGRT-HAAEFLIPGDPHVSGLHFAVELVDDQLMLTDLKSRNGTYLNGERLTQPV--AL 81
Query: 149 SPGSRITFGDTHL 161
G +T G THL
Sbjct: 82 HDGDVVTVGKTHL 94
>gi|366164285|ref|ZP_09464040.1| FHA domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 151
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GR ++ D+VI +SGLHA+I + + DL S N TF++E LR G +
Sbjct: 73 TIGR-QDKNDIVIKDPYMSGLHAQITIRDGIYYIKDLGSKNKTFVNENILREGYDWRLNN 131
Query: 151 GSRITFGDTHL 161
G +I G
Sbjct: 132 GDKIRLGQVEF 142
>gi|282897689|ref|ZP_06305688.1| FHA domain protein containing protein [Raphidiopsis brookii D9]
gi|281197368|gb|EFA72265.1| FHA domain protein containing protein [Raphidiopsis brookii D9]
Length = 210
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 149 VSRIHADIRVEGDAYYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 205
>gi|149921698|ref|ZP_01910146.1| sigma-54 dependent transcriptional regulator, Fis family protein
[Plesiocystis pacifica SIR-1]
gi|149817436|gb|EDM76908.1| sigma-54 dependent transcriptional regulator, Fis family protein
[Plesiocystis pacifica SIR-1]
Length = 489
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEKR 139
++A +TVGR D+V+ +VSG H +I K+G +L+ DL+STNGT I R
Sbjct: 55 IQVARPRITVGR-SAVNDLVLTDTSVSGTHLQISLGDKRG--ILLRDLESTNGTSIGGYR 111
Query: 140 LRSGVVAVASPGSRITFGDTHLAMFRVSKID 170
+R A PG+ I+ G T ++ +I+
Sbjct: 112 IRE---AYIEPGTTISLGKTDVSFMSADEIE 139
>gi|406898804|gb|EKD42264.1| sigma-54 dependent transcription regulator, partial [uncultured
bacterium]
Length = 301
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+I +++G P+ +VI VS H I K L+TDL+STNGT+++ +++
Sbjct: 147 IKIGKMPLSMGSGPDN-QLVINDDYVSSRHGEITKDAHGYLLTDLNSTNGTYLNGRKISE 205
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVE 173
+V V G + G+T + M K +T++
Sbjct: 206 VIVHV---GDEMRLGETLIKMISTKKEETIK 233
>gi|367467151|ref|ZP_09467156.1| FHA domain containing protein [Patulibacter sp. I11]
gi|365817713|gb|EHN12662.1| FHA domain containing protein [Patulibacter sp. I11]
Length = 161
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D ++I V +GR + D+ I A SG HAR+ ++ ++V DL STNGTF++E+ L
Sbjct: 80 DEYDIGPGAV-IGR-GSQVDIKIDDAYASGKHARLVRQAGVVIVEDLGSTNGTFLNEEPL 137
Query: 141 RSGVVAVASP-----GSRITFGDTHL 161
A P G RI GDT
Sbjct: 138 -------AGPQPLQLGDRIRIGDTEF 156
>gi|376260090|ref|YP_005146810.1| FHA domain-containing protein [Clostridium sp. BNL1100]
gi|373944084|gb|AEY65005.1| FHA domain-containing protein [Clostridium sp. BNL1100]
Length = 142
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++T+GR + MV+P VS HA+I + ++ DLDSTNGTF++ R+
Sbjct: 67 SKLTIGR-NKNNQMVLPSRAVSNFHAKIYFEDGRYMLEDLDSTNGTFVNGNRV 118
>gi|291569449|dbj|BAI91721.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 284
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 100 DMVIPVATVSGL---------HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
D+V P VSG HA I+ +GD+ + D+ S+NGT+I+ L G P
Sbjct: 206 DLVPPDIDVSGFANAEIVSRTHANIRPEGDAYYIEDVGSSNGTYINNIPLPKGNRHRLRP 265
Query: 151 GSRITFGDTHLAMF 164
G RI G + F
Sbjct: 266 GDRIALGKGDMVSF 279
>gi|322691063|ref|YP_004220633.1| hypothetical protein BLLJ_0873 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320455919|dbj|BAJ66541.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 147
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+TVGR P RAD+++ +TVS HA ++ V D S NGT+++ +R+ A
Sbjct: 68 EITVGRDP-RADILLDDSTVSRQHAVFRRVNGQFFVVDAGSLNGTYVNRQRVDQ---APL 123
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S I
Sbjct: 124 KNGDEIMIGKFRLVFFTKSAI 144
>gi|256371907|ref|YP_003109731.1| FHA domain-containing protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256008491|gb|ACU54058.1| FHA domain containing protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 164
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
F + VTVGR P+ +D+ + TVS HA I+++GD+ ++ D S NGT+++ +R
Sbjct: 82 FALDRDVVTVGRHPD-SDVFLNDVTVSRRHAEIRREGDAYVLYDAGSLNGTYVNHER 137
>gi|257069296|ref|YP_003155551.1| hypothetical protein Bfae_21570 [Brachybacterium faecium DSM 4810]
gi|256560114|gb|ACU85961.1| predicted membrane protein/domain [Brachybacterium faecium DSM
4810]
Length = 668
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 82 AFEIASTEVTVGRLPE-RADMVIPVA-----TVSGLHARIQKKGDSLLVTDLDSTNG-TF 134
A + V VGR P AD V+ V +VS H RI GD +LVTDL STNG T
Sbjct: 572 AERVVEKAVVVGRNPAASADEVLFVMKDDTRSVSKTHLRIDGSGDEVLVTDLGSTNGSTL 631
Query: 135 IDEKRLRSGVVAVASP----GSRITFGDTHLAMFRV 166
+ E R +V A G+++T GD L + RV
Sbjct: 632 LREDGARENLVPNAPTVLPIGAQVTLGDRTLTVERV 667
>gi|405345885|ref|ZP_11022624.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397093528|gb|EJJ24235.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 138
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGTFIDEKRLRSGV 144
++EVT+GR E D+V+ +VS LHAR +++ + L VTDL+S GT+ D + G
Sbjct: 36 ASEVTLGRGAE-CDIVLAEPSVSRLHARFRREPHTGLWSVTDLESERGTYQDGVLILPGR 94
Query: 145 VAVASPGSRITFGDTHLAMFR 165
A+ SR+T G+ L +
Sbjct: 95 PALLLCRSRLTLGNVELLFLQ 115
>gi|311064373|ref|YP_003971098.1| signal transduction protein GarA [Bifidobacterium bifidum PRL2010]
gi|421736672|ref|ZP_16175442.1| signal transduction protein GarA [Bifidobacterium bifidum IPLA
20015]
gi|310866692|gb|ADP36061.1| GarA Signal transduction protein [Bifidobacterium bifidum PRL2010]
gi|407296042|gb|EKF15654.1| signal transduction protein GarA [Bifidobacterium bifidum IPLA
20015]
Length = 145
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EVTVGR RAD+++ +TVS HA ++ GD+ +V D S NGT+++ +R+ +
Sbjct: 67 EVTVGR-DSRADILLDDSTVSRSHAVFRRVGDTFVVYDSGSLNGTYVNRQRVDHQQL--- 122
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S +
Sbjct: 123 RNGDEIMIGKFRLVFFTKSAV 143
>gi|187776678|ref|ZP_02993151.1| hypothetical protein CLOSPO_00193 [Clostridium sporogenes ATCC
15579]
gi|424835290|ref|ZP_18259955.1| FHA domain-containing protein [Clostridium sporogenes PA 3679]
gi|187775337|gb|EDU39139.1| FHA domain protein [Clostridium sporogenes ATCC 15579]
gi|365978083|gb|EHN14178.1| FHA domain-containing protein [Clostridium sporogenes PA 3679]
Length = 145
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++T+GR P+ +++ VSG HA+I K ++ DL+STNGT +++K +
Sbjct: 72 DITIGRKPDNV-LILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNDKNITGK--NHL 128
Query: 149 SPGSRITFGDTHLAMFRV 166
SPG I G T +F+V
Sbjct: 129 SPGDLIKIGGT---VFKV 143
>gi|432334573|ref|ZP_19586244.1| EmbR family transcriptional regulator, partial [Rhodococcus
wratislaviensis IFP 2016]
gi|430778500|gb|ELB93752.1| EmbR family transcriptional regulator, partial [Rhodococcus
wratislaviensis IFP 2016]
Length = 222
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F I S V +GR+P+ D+V+ VS HA I G + ++ DL S+NG ++ R+
Sbjct: 140 FRIGSAGVRIGRMPDN-DIVLAQGKVSRHHAIIVDTGMNFVLRDLRSSNGVYVGGNRVVD 198
Query: 143 GVVAVASPGSRITFGDTHL 161
V V G I GDT L
Sbjct: 199 SVWLV--DGDIIRIGDTEL 215
>gi|386775392|ref|ZP_10097770.1| hypothetical protein BparL_16501 [Brachybacterium paraconglomeratum
LC44]
Length = 725
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 107 TVSGLHARIQKKGDSLLVTDLDSTNG-TFIDEKRLRSGVVA----VASPGSRITFGDTHL 161
+VS H RI G+ LLVTDL STNG T + E R +V V G+R+T GD L
Sbjct: 660 SVSKTHLRIDGTGEELLVTDLGSTNGSTILREDGSRENLVPETPTVLPAGARLTLGDRTL 719
Query: 162 AMFRV 166
++ RV
Sbjct: 720 SVERV 724
>gi|325182190|emb|CCA16643.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 553
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 78 PMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ-KKGDSLLVTDLDSTNGTFID 136
P +++IA GR+ E D+ ++S HA Q + L + DL ST+GTF++
Sbjct: 36 PKYKSYQIA------GRMKEGCDVHFNHPSISRTHAVFQFDEQGKLFLMDLKSTHGTFLN 89
Query: 137 EKRLRSGVVAVASPGSRITFGDT 159
+KR+ G + G + FGD+
Sbjct: 90 KKRIHPGKFYALNVGDLLRFGDS 112
>gi|441509675|ref|ZP_20991589.1| hypothetical protein GOACH_15_00420 [Gordonia aichiensis NBRC
108223]
gi|441446191|dbj|GAC49550.1| hypothetical protein GOACH_15_00420 [Gordonia aichiensis NBRC
108223]
Length = 154
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G+ P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRITLGQQPVLIGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RLRSGV 144
++ + V
Sbjct: 130 KVTTAV 135
>gi|220935712|ref|YP_002514611.1| FHA-domain containing protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997022|gb|ACL73624.1| FHA-domain containing protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 251
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 72 HIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTN 131
HI K + E+A +GR E D+V+P TVSG HARI ++ DL STN
Sbjct: 5 HIHHKDSLIAVHELAPGTTRIGR-KEDNDIVLPDRTVSGHHARIHHAYGLAVLEDLGSTN 63
Query: 132 GTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPP 189
G+ ++ KR+ + G I G+ L + +T E T+E E + PP
Sbjct: 64 GSSVNGKRVTRRAL---ENGDIIVIGNCQL------RFETDEQVG-TDEPETQDSGPP 111
>gi|386815703|ref|ZP_10102921.1| FHA domain containing protein [Thiothrix nivea DSM 5205]
gi|386420279|gb|EIJ34114.1| FHA domain containing protein [Thiothrix nivea DSM 5205]
Length = 209
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
F + +T VT GR ++D+ +P T+S HARI + + DL+STNGT++++
Sbjct: 16 FPVKATSVTFGR-SSKSDIALPDRTISNHHARITVVREDCFLEDLESTNGTYVNQ 69
>gi|428316025|ref|YP_007113907.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Oscillatoria nigro-viridis PCC 7112]
gi|428239705|gb|AFZ05491.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Oscillatoria nigro-viridis PCC 7112]
Length = 786
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 83 FEIASTEVTVGRLPERADMVIPVA--TVSGLHARIQKKGDSLLVTDLD----STNGTFID 136
E+ + +GR RAD+VIP A VS +HA +++ GD+ + D D STNG F+D
Sbjct: 28 LELKQQQHVLGRDRTRADLVIPEAWRAVSNIHAVLRQIGDNYWIYDGDGQRPSTNGLFVD 87
Query: 137 EKRLRSGVVAVASPGSRITFG 157
R+ G+ I G
Sbjct: 88 RTRITPNDGYCLKDGTEIKIG 108
>gi|298713073|emb|CBJ48848.1| Chain A, Crystal Structure Of The Brct Repeat Region From The
Mediator Of Dna Damage Checkpoint Protein 1, Mdc1
pdb|2ADO|B Chain B, Crystal Structure Of The Brct Repeat
Region From The Mediator Of Dna [Ectocarpus siliculosus]
Length = 1629
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQ------KKGDSLLVTDLDSTNGTFI-- 135
EI E TVGR E D+ + +VSG HA I+ G L V DL STNGT+I
Sbjct: 39 EIKDGETTVGRN-EDQDITVADPSVSGAHAVIEVLEVPGGGGKRLTVKDLRSTNGTYIID 97
Query: 136 ----DEKRLR-SGVVAVASPGSRITFG 157
D+KRL + G RI FG
Sbjct: 98 TETGDKKRLAPKKATMLPEEGCRIQFG 124
>gi|317472136|ref|ZP_07931468.1| FHA domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316900540|gb|EFV22522.1| FHA domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 384
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID------E 137
E+ S E T GR E D+ +P VS H +I +G ++ DL S NGTF++ E
Sbjct: 305 ELNSAEFTAGRQEEGVDLFLPQPGVSRRHFQIVTEGGGYILRDLGSKNGTFLNGEKVWKE 364
Query: 138 KRLRSGVVAVA 148
L+SG + A
Sbjct: 365 TELKSGDIIKA 375
>gi|385205871|ref|ZP_10032741.1| FHA domain-containing protein [Burkholderia sp. Ch1-1]
gi|385185762|gb|EIF35036.1| FHA domain-containing protein [Burkholderia sp. Ch1-1]
Length = 860
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG L V DL STNGTF+ KRL + + G + FG H ++
Sbjct: 180 VNYISRRHAHIFLKGGELYVEDLGSTNGTFVGGKRLDESALPLVE-GDVVAFGGDHF-VY 237
Query: 165 RVSKIDTVE 173
RV+ T E
Sbjct: 238 RVTLQKTPE 246
>gi|406576090|ref|ZP_11051761.1| FHA domain-containing protein [Janibacter hoylei PVAS-1]
gi|404554494|gb|EKA60025.1| FHA domain-containing protein [Janibacter hoylei PVAS-1]
Length = 91
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
G +P+ DA V +GR PE A +V+ SG HARI + D V DL STNGT
Sbjct: 9 GTSLPLRDA------GVLIGRNPECA-LVLDDEFASGRHARILRAEDGWYVEDLGSTNGT 61
Query: 134 FIDEKRL 140
F+ + R+
Sbjct: 62 FVGQYRV 68
>gi|66826637|ref|XP_646673.1| hypothetical protein DDB_G0271054 [Dictyostelium discoideum AX4]
gi|60474940|gb|EAL72877.1| hypothetical protein DDB_G0271054 [Dictyostelium discoideum AX4]
Length = 578
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKK-GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
+GRLP D+ + AT+S HA IQ + G L + DL+ST+G+ I++++ + +
Sbjct: 95 IGRLP-ICDIQLEHATISRQHAIIQHRDGGKLYLYDLNSTHGSMINKQKCKPNIHIPIKV 153
Query: 151 GSRITFGDT 159
G I FG++
Sbjct: 154 GDVIKFGES 162
>gi|309789856|ref|ZP_07684435.1| transcriptional regulator domain-containing protein [Oscillochloris
trichoides DG-6]
gi|308228160|gb|EFO81809.1| transcriptional regulator domain-containing protein [Oscillochloris
trichoides DG6]
Length = 214
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
P+ F ++ E ++GR D+VIP +S LHARI + G ++ D S NGTF++
Sbjct: 20 PNEFLLSGQEHSLGR-SALCDVVIPRHNISRLHARIVRAGPRYMLHDAGSANGTFVN 75
>gi|423223222|ref|ZP_17209691.1| hypothetical protein HMPREF1062_01877 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392639323|gb|EIY33148.1| hypothetical protein HMPREF1062_01877 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 190
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 108 VSGLHARIQKKGDSLL-VTDLDSTNGTFIDEKRLRSGVVAVASPG 151
VSG HAR+QK + DLDSTNGTF++ RL V AV S G
Sbjct: 133 VSGTHARLQKSASGQWEIVDLDSTNGTFVNGNRLSPNVPAVFSIG 177
>gi|302546477|ref|ZP_07298819.1| ABC transporter, ATP-binding protein [Streptomyces hygroscopicus
ATCC 53653]
gi|302464095|gb|EFL27188.1| ABC transporter, ATP-binding protein [Streptomyces himastatinicus
ATCC 53653]
Length = 869
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S +VGR P+ DMV+ A VS HA ++ G S +V D STNGT++ +R++ +
Sbjct: 22 SRSYSVGRDPQ-GDMVLDDARVSWRHATVRWGGRSWVVEDHGSTNGTYVQGQRIQQTEIG 80
Query: 147 VASPGSRITFGD 158
PGS + G+
Sbjct: 81 ---PGSAVHLGN 89
>gi|167748325|ref|ZP_02420452.1| hypothetical protein ANACAC_03069 [Anaerostipes caccae DSM 14662]
gi|167652317|gb|EDR96446.1| FHA domain protein [Anaerostipes caccae DSM 14662]
Length = 384
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID------E 137
E+ S E T GR E D+ +P VS H +I +G ++ DL S NGTF++ E
Sbjct: 305 ELNSAEFTAGRQEEGVDLFLPQPGVSRRHFQIVTEGGGYILRDLGSKNGTFLNGEKVWKE 364
Query: 138 KRLRSGVVAVA 148
L+SG + A
Sbjct: 365 TELKSGDIIKA 375
>gi|392411405|ref|YP_006448012.1| FHA domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390624541|gb|AFM25748.1| FHA domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 253
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 73 IGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTN 131
+ F+ + + + T VT+GR E D+VI VSG HA I+++ + ++ DL+S N
Sbjct: 6 LKFQDAVLEEYTFEKTPVTIGR-REDNDVVIDNMAVSGHHAIIEEEDPNYYVLADLESLN 64
Query: 132 GTFIDEKRL 140
GTF++EK++
Sbjct: 65 GTFVNEKKI 73
>gi|389861766|ref|YP_006364005.1| hypothetical protein MODMU_0028 [Modestobacter marinus]
gi|388483968|emb|CCH85500.1| Conserved protein of unknown function; putative FHA domain
[Modestobacter marinus]
Length = 153
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 82 AFEIASTEVTVGR---LPERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
A ++ T +T+G L RAD +V+ S HAR+ +G V DL STNGT++
Sbjct: 66 AGPLSGTRITLGEQAILIGRADDSTLVLTDDFASSRHARLTNRGGQWYVEDLGSTNGTYL 125
Query: 136 DEKRLRSGVVAVASPGSRITFGDTHLAM 163
D++R++ + + PG I G T L +
Sbjct: 126 DQQRVQGPL--LVGPGQPIRIGQTVLEL 151
>gi|300863916|ref|ZP_07108834.1| FHA domain-containing protein [Oscillatoria sp. PCC 6506]
gi|300338102|emb|CBN53980.1| FHA domain-containing protein [Oscillatoria sp. PCC 6506]
Length = 262
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 100 DMVIPVATVSGL---------HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
D+V P VSG HA I+ +GD+ + D+ S+NGT+I+ L G P
Sbjct: 184 DLVPPDVDVSGFPNSEVVSRTHADIRVEGDAYYIEDVGSSNGTYINNTPLSKGNRHRLRP 243
Query: 151 GSRITFGDTHLAMF 164
G RI+ G + F
Sbjct: 244 GDRISLGKGDMVSF 257
>gi|220907785|ref|YP_002483096.1| guanylate cyclase [Cyanothece sp. PCC 7425]
gi|219864396|gb|ACL44735.1| adenylate/guanylate cyclase [Cyanothece sp. PCC 7425]
Length = 395
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTNGTFIDEKRLRSG 143
+ S+ T+GR + A +V+P +S HA +Q G + DL S NGTF++ +R+ S
Sbjct: 85 VGSSCWTIGRSEDNA-VVVPDRWMSRNHAMLQSMGAGEFYLIDLGSRNGTFVNGRRV-SV 142
Query: 144 VVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEES 181
VA+ + G R+TFG T L + P + EES
Sbjct: 143 PVALQN-GDRLTFGQTELEFY-------CAPPLRLEES 172
>gi|75907043|ref|YP_321339.1| FHA domain-containing protein [Anabaena variabilis ATCC 29413]
gi|75700768|gb|ABA20444.1| FHA domain containing protein [Anabaena variabilis ATCC 29413]
Length = 193
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P R D+V+ TVSGLH I + + + +L S N ID ++L G +
Sbjct: 31 VRIGRDPLRCDIVLTNPTVSGLHVEIFFHSQQQNFYIRNLRSQNPPLIDGQQLIQGEKPL 90
Query: 148 ASPGSRITFGDTHLAMFRVSKIDTVEA 174
GS I G L + ++ I+T+ A
Sbjct: 91 NQ-GSIIYLGQAQLHITNIT-INTIAA 115
>gi|145524181|ref|XP_001447918.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415451|emb|CAK80521.1| unnamed protein product [Paramecium tetraurelia]
Length = 571
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
+G+ + D+V+ T+S HA +Q K + + DL ST+GTF++ R+ + + P
Sbjct: 47 IGKNEKICDIVLDNPTISRKHAVLQSKNTNEFYLYDLGSTHGTFVNNVRIPTKLFHKLKP 106
Query: 151 GSRITFGDT-HLAMFRVSKIDTVEAPSKTEESEEKGDS 187
++ FG + + + R ++ +A + +E ++K D
Sbjct: 107 YDQLKFGQSLRMYILRCEDLEKEDANVQEQELQKKLDK 144
>gi|219847071|ref|YP_002461504.1| putative winged helix family two component transcriptional
regulator [Chloroflexus aggregans DSM 9485]
gi|219541330|gb|ACL23068.1| putative two component transcriptional regulator, winged helix
family [Chloroflexus aggregans DSM 9485]
Length = 219
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 66 GDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVT 125
G+GD I + P+ +TVGR D++I S HAR ++ + V
Sbjct: 15 GNGDYREIVWDRPI----------ITVGR-DAANDIIIDHPLASRRHARFEQTEEGFFVR 63
Query: 126 DLDSTNGTFIDEKRL 140
DLDSTNGTF++++R+
Sbjct: 64 DLDSTNGTFLNQERV 78
>gi|224536927|ref|ZP_03677466.1| hypothetical protein BACCELL_01803 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521454|gb|EEF90559.1| hypothetical protein BACCELL_01803 [Bacteroides cellulosilyticus
DSM 14838]
Length = 81
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 91 TVGRLPERADMVIPVAT---VSGLHARIQKKGDSLL-VTDLDSTNGTFIDEKRLRSGVVA 146
+GR + D V A+ VSG HAR+QK + DLDSTNGTF++ RL V A
Sbjct: 6 VIGR--RKGDYVSAFASQGYVSGTHARLQKSASGQWEIVDLDSTNGTFVNGNRLSPNVPA 63
Query: 147 VASPG 151
V S G
Sbjct: 64 VFSIG 68
>gi|291456811|ref|ZP_06596201.1| oxoglutarate dehydrogenase inhibitor [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|384196937|ref|YP_005582681.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
breve ACS-071-V-Sch8b]
gi|417942175|ref|ZP_12585452.1| Oxoglutarate dehydrogenase inhibitor [Bifidobacterium breve CECT
7263]
gi|291382088|gb|EFE89606.1| oxoglutarate dehydrogenase inhibitor [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|333109479|gb|AEF26495.1| putative oxoglutarate dehydrogenase inhibitor [Bifidobacterium
breve ACS-071-V-Sch8b]
gi|339479247|gb|ABE95715.1| Signal transduction protein garA [Bifidobacterium breve UCC2003]
gi|376167560|gb|EHS86396.1| Oxoglutarate dehydrogenase inhibitor [Bifidobacterium breve CECT
7263]
Length = 147
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+TVGR P RAD+++ +TVS HA ++ V D S NGT+++ +R+ AV
Sbjct: 68 EITVGRDP-RADILLDDSTVSRQHAVFRRVNGQYSVIDAGSLNGTYVNRQRVDQ---AVL 123
Query: 149 SPGSRITFGDTHLAMF 164
G I G L F
Sbjct: 124 KNGDEIMIGKFRLVFF 139
>gi|452910653|ref|ZP_21959332.1| hypothetical protein C884_02238 [Kocuria palustris PEL]
gi|452834280|gb|EME37082.1| hypothetical protein C884_02238 [Kocuria palustris PEL]
Length = 1014
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
A EI T +TVGR P AD++I VS HA++++ ++TDL STNGT+++ +R+
Sbjct: 312 AREIGGT-LTVGRDPS-ADVLIDGLLVSRRHAQVKRTERGSMLTDLGSTNGTWVNGQRI- 368
Query: 142 SGVVAVASPGSRITFGDTHLAMFRVSKIDTVE 173
SG V + PG++ G FR +++ E
Sbjct: 369 SGTVELL-PGAQAVIGGVP---FRQTEVGLAE 396
>gi|296133925|ref|YP_003641172.1| FHA domain-containing protein [Thermincola potens JR]
gi|296032503|gb|ADG83271.1| FHA domain containing protein [Thermincola potens JR]
Length = 520
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D + + + +GR E D VI ++ HA I+ + DLDS NGTFI+ +L
Sbjct: 435 DKIILDKSTMVIGRNKETCDWVIANKSIGRAHAEIKCIDGVYYIVDLDSRNGTFINGDKL 494
Query: 141 RSGVVAVASPGSRITFGD 158
S +ITF D
Sbjct: 495 ISNKQYALRENDKITFAD 512
>gi|84579404|dbj|BAE72089.1| Lactuca sativa zeaxantin epoxidase 1
Length = 663
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 54 DVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTE---VTVGRLPERA----DM 101
D A ER W L PVG + ++G D ++ E VG +P + +
Sbjct: 521 DDAIERILGGEWFLLPVG---SQNVG-----SDPISLSRDEKKPCIVGSVPHTSIPGNSI 572
Query: 102 VIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLR--SGVVAVASPGSRITF 156
VI +S LHARI K + VTDL S +GT+I +++R R A P + F
Sbjct: 573 VISSPEISKLHARISCKDGAFFVTDLRSEHGTYITDNEDRRYRVPPNFPARFHPSDVLEF 632
Query: 157 GDTHLAMFRVSKIDTVEAPSKTEESEEK 184
G FRV + E P ++E E +
Sbjct: 633 GPNKKVAFRVKVMR--EPPKMSKEGENR 658
>gi|406835410|ref|ZP_11095004.1| ATP-binding region ATPase domain-containing protein [Schlesneria
paludicola DSM 18645]
Length = 582
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
FE+ +++GR R ++ I + VS LHA +Q+ D ++TD +S+NGTF++ +RS
Sbjct: 38 FELLDRPLSLGR-DARNEIRILDSEVSRLHATVQRVKDDFVLTDRNSSNGTFVNGVVIRS 96
Query: 143 GVVAVASPGSRITFGDTHLAMF 164
V+ G +I G++ L +F
Sbjct: 97 HVLV---DGDQIQLGNS-LLLF 114
>gi|309790371|ref|ZP_07684936.1| FHA domain containing protein [Oscillochloris trichoides DG-6]
gi|308227563|gb|EFO81226.1| FHA domain containing protein [Oscillochloris trichoides DG6]
Length = 846
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + S ++ GR PE +VI S HA ++ +G ++ DL+S+NGT ++ +R++
Sbjct: 17 FALGSGPLSFGRTPENT-IVISSPLASRRHAELRFEGGGYVLYDLNSSNGTLLNGQRVQ- 74
Query: 143 GVVAVASPGSRITFGD 158
V PG IT GD
Sbjct: 75 --VQRMRPGDVITIGD 88
>gi|374582945|ref|ZP_09656039.1| FHA domain-containing protein [Desulfosporosinus youngiae DSM
17734]
gi|374419027|gb|EHQ91462.1| FHA domain-containing protein [Desulfosporosinus youngiae DSM
17734]
Length = 272
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQK-KGDSLLVTDLDSTNGTFIDEKRLR 141
F + EV +GR + D+V+ +S H +I + + + DL STNGTF++ +R+
Sbjct: 189 FALQDEEVIIGRHGQ-CDLVLHDPEISRRHLKIAPGRENGWWLDDLGSTNGTFVNGQRIT 247
Query: 142 SGVVAVASPGSRITFGDTHLAMFR 165
VA PG RIT G + L + R
Sbjct: 248 HQTVA---PGDRITIGQSVLVIQR 268
>gi|66768955|ref|YP_243717.1| hypothetical protein XC_2648 [Xanthomonas campestris pv. campestris
str. 8004]
gi|77747827|ref|NP_636956.2| hypothetical protein XCC1585 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|384427520|ref|YP_005636879.1| FHA domain-containing protein [Xanthomonas campestris pv. raphani
756C]
gi|66574287|gb|AAY49697.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|341936622|gb|AEL06761.1| FHA domain protein [Xanthomonas campestris pv. raphani 756C]
Length = 269
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 202
Query: 159 THLAMFRVSKI 169
H + V KI
Sbjct: 203 RHRFVVEVPKI 213
>gi|357053296|ref|ZP_09114394.1| hypothetical protein HMPREF9467_01366 [Clostridium clostridioforme
2_1_49FAA]
gi|355385873|gb|EHG32919.1| hypothetical protein HMPREF9467_01366 [Clostridium clostridioforme
2_1_49FAA]
Length = 483
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I+ +G+ + AD V+ TVS H R+ + VTDL+STNGT + + L +
Sbjct: 404 ISYFPFVIGKHKDLADYVLLKDTVSRFHIRLDENNGRYTVTDLNSTNGTRVRGRLLEANE 463
Query: 145 VAVASPGSRITFGDTHLAMF 164
PG +I D +
Sbjct: 464 TTQLEPGDQIFMADCGYVFY 483
>gi|328947914|ref|YP_004365251.1| FHA domain-containing protein [Treponema succinifaciens DSM 2489]
gi|328448238|gb|AEB13954.1| FHA domain containing protein [Treponema succinifaciens DSM 2489]
Length = 114
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 69 DTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLD 128
++ + + V +IA+ ++T+GR + D+VI S H IQK D+ + D
Sbjct: 21 ESQQVSYLVFNKKKIQIAA-KITMGRESDN-DIVIDSKLASRHHCIIQKIRDAYFLKDEG 78
Query: 129 STNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
STNGTF++ +R+ + G ++T G ++L M
Sbjct: 79 STNGTFLNGRRIPPDKYVKLNAGDKLTIGSSNLIM 113
>gi|338533443|ref|YP_004666777.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337259539|gb|AEI65699.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 452
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
I++ T+GR P R ++V+ VS HA + + GD + + DL+S+NGT+++ +R+
Sbjct: 371 ISTERFTIGRGP-RCNLVVRSERVSREHAVVTRVGDEVFIEDLNSSNGTWLNNERI 425
>gi|283782277|ref|YP_003373032.1| diguanylate phosphodiesterase [Pirellula staleyi DSM 6068]
gi|283440730|gb|ADB19172.1| diguanylate phosphodiesterase [Pirellula staleyi DSM 6068]
Length = 377
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR--- 139
FE+ + + +GR P+ D+ +P+ ++S HA I + L++ D STNGTF++ R
Sbjct: 39 FELGTRPLRIGRTPD-MDVCLPLGSISKHHATITPQSMGLVIRDNGSTNGTFLNGVRATT 97
Query: 140 ---LRSG-VVAVASPGSRIT 155
LR G +V AS R++
Sbjct: 98 DMLLREGDIVQFASEAFRLS 117
>gi|434384832|ref|YP_007095443.1| membrane carboxypeptidase (penicillin-binding protein)
[Chamaesiphon minutus PCC 6605]
gi|428015822|gb|AFY91916.1| membrane carboxypeptidase (penicillin-binding protein)
[Chamaesiphon minutus PCC 6605]
Length = 750
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 78 PMPDAFEIASTEVTVGRLPERADMVIPVATVSGLH---ARIQKKGDSLLVTDLDSTNGTF 134
P PD F + + +GR + D+V+ VS +H +R +KKG + L+ D STNG +
Sbjct: 47 PQPDIFPLLGEKYVLGRSSQSCDIVVRNEVVSQVHLSLSRDRKKGTTFLLKDEGSTNGIY 106
Query: 135 IDEKRL 140
+KR+
Sbjct: 107 RGKKRV 112
>gi|269216573|ref|ZP_06160427.1| FHA domain containing protein [Slackia exigua ATCC 700122]
gi|402829812|ref|ZP_10878685.1| FHA domain protein [Slackia sp. CM382]
gi|269130102|gb|EEZ61184.1| FHA domain containing protein [Slackia exigua ATCC 700122]
gi|402283479|gb|EJU31993.1| FHA domain protein [Slackia sp. CM382]
Length = 137
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ VGR P AD+VI + VS HAR G +L V DL STNGT ++ +R+
Sbjct: 64 IIVGRSPG-ADIVIGASYVSARHARFVLMGQNLFVEDLGSTNGTAVNGQRI 113
>gi|261335250|emb|CBH18244.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 557
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIA--STEVTVGR---LPERADMVIPVATVSGLHARIQ 116
L P+ DG T+ + +VPMP EI S +T+GR LP + + VA VS H ++
Sbjct: 49 LIPIRDGSTASL--RVPMP-ILEIYRDSGTITMGRSRELP--VECRVDVARVSTQHCELR 103
Query: 117 KKGDSLLVTDLD-STNGTFIDEKRLRSGVVAVASPGSRITF 156
+ VT D S NGTF++ KRL GV G +I+F
Sbjct: 104 VNAVTRQVTVRDISLNGTFVNGKRLEKGVDVELQSGDQISF 144
>gi|238060759|ref|ZP_04605468.1| hypothetical protein MCAG_01725 [Micromonospora sp. ATCC 39149]
gi|237882570|gb|EEP71398.1| hypothetical protein MCAG_01725 [Micromonospora sp. ATCC 39149]
Length = 138
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+F +++T +GR P A + + +S HA ++ GD + + DL STNGT+++++R+
Sbjct: 22 SFRLSATPQVIGRAPT-AQVSVDDPHLSRRHASVRLTGDGVWLEDLGSTNGTWLNDRRIE 80
Query: 142 SGVVAVASPGSRITFGDTHLAMF 164
V + S G I G T L F
Sbjct: 81 --VPELLSDGDVIRLGRTELRFF 101
>gi|254480645|ref|ZP_05093892.1| FHA domain protein [marine gamma proteobacterium HTCC2148]
gi|214039228|gb|EEB79888.1| FHA domain protein [marine gamma proteobacterium HTCC2148]
Length = 275
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+A + S+ VT+GR PE ++V+ + S HA+I ++ L + DL STNGT ++ ++L
Sbjct: 14 EAIPLISSSVTLGRGPE-CEIVVDCSEASRQHAKITRRDGRLTIEDLGSTNGTTLNGQQL 72
Query: 141 R 141
R
Sbjct: 73 R 73
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D+ + T+S +HAR+ + ++ V DL+STNGT I+ +++ GV +T GDT
Sbjct: 206 DLEVSDITISSVHARVTLQSNTWHVEDLNSTNGTRINGEKIDRGV---------LTDGDT 256
Query: 160 HLAMFRVSKID 170
R+ K+D
Sbjct: 257 ----LRLGKVD 263
>gi|186472672|ref|YP_001860014.1| FHA domain-containing protein [Burkholderia phymatum STM815]
gi|184195004|gb|ACC72968.1| FHA domain containing protein [Burkholderia phymatum STM815]
Length = 853
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ T+ R +R V +S HA I K V DL STNGTF++ KRL
Sbjct: 157 FLVSKTDELFARYKDRYPH--QVNYISRRHAHIFLKSGEPWVEDLGSTNGTFVNHKRLGE 214
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVE 173
VA+ G I FG H ++R++ + E
Sbjct: 215 SAVALQD-GDTIGFGGDHF-VYRITLAKSFE 243
>gi|148272355|ref|YP_001221916.1| hypothetical protein CMM_1175 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830285|emb|CAN01219.1| hypothetical protein containing putative FHA domain [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 396
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFI-----DEKRLRSGVVAVASPGSRITFGD 158
P+ +SG H +++ ++VTDLDSTNGT + + LR G V PG+RI GD
Sbjct: 327 PLGEISGTHLGLRQDAGVIVVTDLDSTNGTVVLAPGAEHLALRPGESLVVVPGTRIDIGD 386
>gi|147678121|ref|YP_001212336.1| signaling protein [Pelotomaculum thermopropionicum SI]
gi|146274218|dbj|BAF59967.1| hypothetical signaling protein [Pelotomaculum thermopropionicum SI]
Length = 252
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F++ + +GR E D+V+ ++VS HAR++ +TDL STNGT ++ R+ S
Sbjct: 173 FKLGDISMIIGRR-EGCDIVLNDSSVSRRHARLELHRGRYTITDLGSTNGTMVNGVRINS 231
Query: 143 GVVAVASPGSRITFGDTHLAMFRV 166
+ PG IT G T + +F+V
Sbjct: 232 KAL---EPGDVITLGTT-VFIFKV 251
>gi|188992069|ref|YP_001904079.1| hypothetical protein xccb100_2674 [Xanthomonas campestris pv.
campestris str. B100]
gi|167733829|emb|CAP52035.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 283
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 160 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 216
Query: 159 THLAMFRVSKI 169
H + V KI
Sbjct: 217 RHRFVVEVPKI 227
>gi|74025430|ref|XP_829281.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834667|gb|EAN80169.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 557
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIA--STEVTVGR---LPERADMVIPVATVSGLHARIQ 116
L P+ DG T+ + +VPMP EI S +T+GR LP + + VA VS H ++
Sbjct: 49 LIPIRDGSTASL--RVPMP-ILEIYRDSGTITMGRSRELP--VECRVDVARVSTQHCELR 103
Query: 117 KKGDSLLVTDLD-STNGTFIDEKRLRSGVVAVASPGSRITF 156
+ VT D S NGTF++ KRL GV G +I+F
Sbjct: 104 VNAVTRQVTVRDISLNGTFVNGKRLEKGVDVELQSGDQISF 144
>gi|15893795|ref|NP_347144.1| FHA-domain-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337735718|ref|YP_004635165.1| FHA-domain-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384457229|ref|YP_005669649.1| FHA-domain containing protein [Clostridium acetobutylicum EA 2018]
gi|15023366|gb|AAK78484.1|AE007565_3 FHA-domain containing secreted protein [Clostridium acetobutylicum
ATCC 824]
gi|325507918|gb|ADZ19554.1| FHA-domain containing secreted protein [Clostridium acetobutylicum
EA 2018]
gi|336290145|gb|AEI31279.1| FHA-domain-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 159
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
S E+T+GR + + M + VSG HAR+ + + ++ DL+STNGT ++ ++++S
Sbjct: 83 VSREITIGRKDDNSIM-LNEGYVSGHHARVYLRNNQYILEDLNSTNGTVLNGQKIKSK-- 139
Query: 146 AVASPGSRITFGDTHLAMFRV 166
A G I G + +F+V
Sbjct: 140 AYIKSGDEIKIGSS---LFKV 157
>gi|209523683|ref|ZP_03272236.1| FHA domain containing protein [Arthrospira maxima CS-328]
gi|376005203|ref|ZP_09782739.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423065404|ref|ZP_17054194.1| FHA domain containing protein [Arthrospira platensis C1]
gi|209495715|gb|EDZ96017.1| FHA domain containing protein [Arthrospira maxima CS-328]
gi|375326410|emb|CCE18492.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406713097|gb|EKD08271.1| FHA domain containing protein [Arthrospira platensis C1]
Length = 279
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 100 DMVIPVATVSGL---------HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
D+V P VSG HA I+ +GD+ + D+ S+NGT+I+ L G P
Sbjct: 201 DLVPPDIDVSGFTNAEIVSRTHANIRLEGDAYYIEDVGSSNGTYINNIPLPKGNRHRLRP 260
Query: 151 GSRITFGDTHLAMF 164
G RI G L F
Sbjct: 261 GDRIALGKGDLVSF 274
>gi|186682823|ref|YP_001866019.1| FHA domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186465275|gb|ACC81076.1| FHA domain containing protein [Nostoc punctiforme PCC 73102]
Length = 291
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ V D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 230 VSRIHADIRVEGDAHYVEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLMTF 286
>gi|301060732|ref|ZP_07201547.1| FHA domain protein [delta proteobacterium NaphS2]
gi|300445129|gb|EFK09079.1| FHA domain protein [delta proteobacterium NaphS2]
Length = 245
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ +G L + D+VI +SG HA I+ +GD +TD S NGTFI+++ + S +
Sbjct: 24 LNIGVLADN-DLVIDDPAISGHHAEIEAEGDYFYITDRQSRNGTFINDELIISRPL---K 79
Query: 150 PGSRITFGDTHLAMFRVSKIDTVEAPSK 177
G I+ G+ H+ F + +TV + +K
Sbjct: 80 QGDVISMGE-HILEFFYEEGETVPSDAK 106
>gi|269956530|ref|YP_003326319.1| FHA domain containing protein [Xylanimonas cellulosilytica DSM
15894]
gi|269305211|gb|ACZ30761.1| FHA domain containing protein [Xylanimonas cellulosilytica DSM
15894]
Length = 156
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 97 ERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF 156
E A++ + TVS HA ++GD +V D+ S NGT+++ +R+ S V +T
Sbjct: 78 ETAEIFLDDVTVSRKHAEFVREGDRFVVRDIGSLNGTYVNRQRIDSAV---------LTT 128
Query: 157 GD-THLAMFRVSKIDTVEAPSKT 178
GD + FR+S + +AP +T
Sbjct: 129 GDEVQIGKFRMSFQASPQAPRET 151
>gi|119486570|ref|ZP_01620620.1| hypothetical protein L8106_12505 [Lyngbya sp. PCC 8106]
gi|119456187|gb|EAW37319.1| hypothetical protein L8106_12505 [Lyngbya sp. PCC 8106]
Length = 177
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
+ +GR P R D+V+ TVSGLH I D V L TN ID +L S A
Sbjct: 31 IRIGRDPHRCDVVLSHPTVSGLHVEIFFDSTSDQFRVRSLRDTNPPRID-GQLLSSQEAT 89
Query: 148 ASPGSRITFGDTHL----AMFRVSKI 169
+PGS + G L + R+ KI
Sbjct: 90 LNPGSHLCLGQVELEVVSVLNRIEKI 115
>gi|388578826|gb|EIM19160.1| Pkinase-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 578
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 60 W-LLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
W +L PVG D + + F P GR P+ D+++ +S H +I +
Sbjct: 10 WGVLMPVGRRDLNSVTFLNEKP--------LYRFGRHPQENDIILTGKKISNNHCKIYQT 61
Query: 119 GDS-------------LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
GD ++ + S+NGT+I++ R GV PG ++FG+
Sbjct: 62 GDYDNTDDAGSASTEIVIFLEDTSSNGTYINQVRCGRGVKRRLMPGDEVSFGN 114
>gi|443287996|ref|ZP_21027090.1| Conserved hypothetical protein (FHA domain-containing protein)
[Micromonospora lupini str. Lupac 08]
gi|385881958|emb|CCH22183.1| Conserved hypothetical protein (FHA domain-containing protein)
[Micromonospora lupini str. Lupac 08]
Length = 262
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ ST + G ++A++ +P +S HAR+ G +++TDL STNGT ++ +R
Sbjct: 184 LQMGSTVIGRG---DQANLRLPDVGISRRHARLDFDGGQVVLTDLGSTNGTMVNGQR--- 237
Query: 143 GVVAVA-SPGSRITFGDTHLAMFRV 166
V AVA +PG + G T L FRV
Sbjct: 238 -VSAVALNPGDMVQLGTTTLT-FRV 260
>gi|291087345|ref|ZP_06346185.2| putative FHA domain protein [Clostridium sp. M62/1]
gi|291075448|gb|EFE12812.1| FHA domain protein [Clostridium sp. M62/1]
Length = 555
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
EI +G+ E D V+ TVS LH R+ KK + TD++STNGT ++ ++ +
Sbjct: 473 EIPYVPFLIGKHEEMNDYVLNYPTVSRLHLRVDKKEKVYIFTDMNSTNGTTVNGYKMEAN 532
Query: 144 VVAVASPG 151
G
Sbjct: 533 ETVSVKEG 540
>gi|325111097|ref|YP_004272165.1| forkhead-associated protein [Planctomyces brasiliensis DSM 5305]
gi|324971365|gb|ADY62143.1| Forkhead-associated protein [Planctomyces brasiliensis DSM 5305]
Length = 143
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 77 VPMPDA--FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
+P+ D EI VGR D+VI ++S LH + + L + DL STNGT
Sbjct: 6 IPLDDGPTIEITRDVTIVGRKKGICDLVIDHPSISKLHCIVARTDGLLFIRDLGSTNGTK 65
Query: 135 IDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
++ +R+ G + PG + F +F
Sbjct: 66 VNGQRVLRGAIL---PGDELAFAKVRFKVF 92
>gi|295102478|emb|CBL00023.1| FOG: FHA domain [Faecalibacterium prausnitzii L2-6]
Length = 357
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI-DEKRLRSGVV 145
+TEV +G+ +A++++ +S HA+I + + DL S NGTF+ DEK L S V
Sbjct: 280 NTEVVIGK-GSQANIIVSNPIISRAHAKISCRNGVCTIQDLGSKNGTFVGDEKILGSNTV 338
Query: 146 AVASPGSRITFGD 158
+A+ G IT G+
Sbjct: 339 TLAN-GMYITLGN 350
>gi|441518017|ref|ZP_20999746.1| hypothetical protein GOHSU_23_00530 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455159|dbj|GAC57707.1| hypothetical protein GOHSU_23_00530 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 152
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P RAD +V+ S HAR+ K+GD V DL STNGT++D
Sbjct: 68 LANTRITLGDQPVLIGRADDSTLVLSDDYASERHARLSKRGDDWYVEDLGSTNGTYLDRG 127
Query: 139 RLRSGVVA 146
++ + V A
Sbjct: 128 KVTTAVRA 135
>gi|354564984|ref|ZP_08984160.1| serine/threonine protein kinase with FHA domain [Fischerella sp.
JSC-11]
gi|353550110|gb|EHC19549.1| serine/threonine protein kinase with FHA domain [Fischerella sp.
JSC-11]
Length = 582
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
++ +GR P+ D+V+P T+SGLHA I + + +L N +D + L +G +
Sbjct: 324 KIRIGRNPQECDIVLPDLTISGLHAEIFFHTEKQRFYLRNLRQQNPPIVDGQLLLAGEIP 383
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVE 173
+A GS I G FRV I E
Sbjct: 384 LAV-GSHIRLGQQD---FRVKDITCKE 406
>gi|156742036|ref|YP_001432165.1| FHA domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156233364|gb|ABU58147.1| FHA domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 154
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
+GR E+ ++ + + +S HAR++ +G+ ++ DL+STNGTF+++ +R V
Sbjct: 82 IGRSMEQCEIALNDSFLSQQHARLELRGNQWVLEDLNSTNGTFVNDIEVRGATVV 136
>gi|296270778|ref|YP_003653410.1| FHA domain-containing protein [Thermobispora bispora DSM 43833]
gi|296093565|gb|ADG89517.1| FHA domain containing protein [Thermobispora bispora DSM 43833]
Length = 178
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
T VGR P D+V+ TVS +HA +++ + +V DL S NGT ++ RL A
Sbjct: 101 TRYIVGRAPT-CDLVLTDLTVSRVHAELRRVDGTWVVVDLGSMNGTRLNGWRLLGP--AT 157
Query: 148 ASPGSRITFGDT 159
PG + FGD
Sbjct: 158 VRPGDEVAFGDC 169
>gi|222840530|gb|ACM68704.1| zeaxanthin epoxidase [Brassica rapa subsp. pekinensis]
Length = 668
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 101 MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGSRIT 155
+VIP VS +HAR+ K + V DL S +GT++ + R+ A P I
Sbjct: 574 IVIPSPQVSKMHARVIYKDGAFFVMDLRSEHGTYLTDNEGGKYRVTPNFPARFRPSDIIE 633
Query: 156 FGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSSA 193
FG A FRV I T K +EK D L +A
Sbjct: 634 FGSDKKAAFRVKVIRTT---PKLTRRDEKSDGKLLQAA 668
>gi|149921354|ref|ZP_01909808.1| FHA domain containing protein [Plesiocystis pacifica SIR-1]
gi|149817787|gb|EDM77251.1| FHA domain containing protein [Plesiocystis pacifica SIR-1]
Length = 269
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 112 HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
HA + G+ + DL+S NGTF+D +RL SG + + G+++ FG
Sbjct: 5 HAALNWTGEQWTIRDLNSRNGTFVDGRRLGSGERGIIAAGTQLGFG 50
>gi|427731782|ref|YP_007078019.1| FHA domain-containing protein [Nostoc sp. PCC 7524]
gi|427367701|gb|AFY50422.1| FHA domain-containing protein [Nostoc sp. PCC 7524]
Length = 215
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P R D+V+ TVSGLH I + S + +L S N ID ++L G +
Sbjct: 52 VRIGRDPLRCDIVLTNPTVSGLHVEIFFNSQQQSFYIRNLRSPNPPLIDGQQLIQGERPL 111
Query: 148 ASPGSRITFGDTHLAMFRVSKIDTVEA 174
GS I G L + V+ I+T+ A
Sbjct: 112 NQ-GSIIYLGQLQLQVTAVN-INTIAA 136
>gi|400976047|ref|ZP_10803278.1| hypothetical protein SPAM21_09008 [Salinibacterium sp. PAMC 21357]
Length = 172
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
G ++ +PD ++T+GR E + +VI S HAR+ + DS +V DLDSTNGT
Sbjct: 90 GLEISLPDE------QLTIGRSSE-SGLVIRDDYTSTHHARLLRWADSWVVQDLDSTNGT 142
Query: 134 FIDEKRL 140
F+ +R+
Sbjct: 143 FLAGQRV 149
>gi|149200007|ref|ZP_01877033.1| FHA domain protein [Lentisphaera araneosa HTCC2155]
gi|149136880|gb|EDM25307.1| FHA domain protein [Lentisphaera araneosa HTCC2155]
Length = 168
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
FE+ T+GR ER ++ IP T+S HA I++ G+ D STNGT I+ R+
Sbjct: 18 FELTGNLYTIGRTDER-EICIPDGTISSYHAEIERNGEIYTARDKGSTNGTRINGIRI 74
>gi|156742490|ref|YP_001432619.1| FHA domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156233818|gb|ABU58601.1| FHA domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 946
Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVAT--VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
F+I +T+GR AD I +A+ S HA+I+++G S ++ DL S NGT ++ +R+
Sbjct: 17 FDIGDQPLTIGR---AADNHIAIASPRASRHHAQIRREGASFVLYDLGSANGTLVNGQRV 73
Query: 141 RSGVVAVASPGSRITFGD 158
+ AV PG I GD
Sbjct: 74 QR---AVLQPGDLIDIGD 88
>gi|32477698|ref|NP_870692.1| hypothetical protein RB12766 [Rhodopirellula baltica SH 1]
gi|417305815|ref|ZP_12092759.1| diguanylate phosphodiesterase [Rhodopirellula baltica WH47]
gi|421611859|ref|ZP_16052988.1| diguanylate phosphodiesterase [Rhodopirellula baltica SH28]
gi|440718103|ref|ZP_20898567.1| diguanylate phosphodiesterase [Rhodopirellula baltica SWK14]
gi|32448252|emb|CAD77769.1| conserved hypothetical protein-putative EAL domain protein
[Rhodopirellula baltica SH 1]
gi|327537907|gb|EGF24607.1| diguanylate phosphodiesterase [Rhodopirellula baltica WH47]
gi|408497326|gb|EKK01856.1| diguanylate phosphodiesterase [Rhodopirellula baltica SH28]
gi|436436645|gb|ELP30365.1| diguanylate phosphodiesterase [Rhodopirellula baltica SWK14]
Length = 371
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 52 STDVAAERWLLQ-PVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSG 110
ST V + W L P+G GDT P I VGR A M + TVSG
Sbjct: 15 STSVHEDVWFLSGPMGPGDTLQ---HTP------IDQEPFIVGRKSGVA-MKLQFRTVSG 64
Query: 111 LHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
HA ++ + L+V DL+STNGT+++ KR+
Sbjct: 65 NHAELKIEDSKLIVRDLESTNGTYLNGKRV 94
>gi|323356575|ref|YP_004222971.1| FHA domain [Microbacterium testaceum StLB037]
gi|323272946|dbj|BAJ73091.1| FOG: FHA domain [Microbacterium testaceum StLB037]
Length = 164
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
TVGR PE AD+ TVS HA I + G S + D S NG++++ +R+ V+A
Sbjct: 84 TVGRHPE-ADIFFDDVTVSRRHAEIIRSGTSFEIVDQRSLNGSYVNGERVDRSVLA---N 139
Query: 151 GSRITFGDTHLAMFRVSKID 170
G+ + G L F VS +D
Sbjct: 140 GAEVRIGKFRLNFF-VSPVD 158
>gi|405979375|ref|ZP_11037719.1| hypothetical protein HMPREF9241_00442 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404392756|gb|EJZ87814.1| hypothetical protein HMPREF9241_00442 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 164
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ +T + +GR P + +V+ SG HAR+Q + DL S NGTF+D++RL
Sbjct: 87 LGTTPIVIGRSPA-STLVLEDEYASGRHARLQPSEQGWWIEDLSSRNGTFVDDERL 141
>gi|398805158|ref|ZP_10564139.1| FHA domain-containing protein [Polaromonas sp. CF318]
gi|398092320|gb|EJL82735.1| FHA domain-containing protein [Polaromonas sp. CF318]
Length = 219
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
++GR P D+VI VSG HA +Q G+ + + DL+STNGT+++ K ++
Sbjct: 24 SLGRRPYN-DIVIDNLAVSGEHAVLQMSGNEVYLEDLNSTNGTYVNGKAVK 73
>gi|388570236|ref|ZP_10156595.1| FHA-domain-containing protein [Hydrogenophaga sp. PBC]
gi|388262518|gb|EIK88149.1| FHA-domain-containing protein [Hydrogenophaga sp. PBC]
Length = 210
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
T+GR P D+VI VSG HA +Q G + + DL+STNGT+++ K ++
Sbjct: 24 TLGRRPYN-DIVIDNLAVSGEHAVLQMSGADVFLEDLNSTNGTYVNGKAIK 73
>gi|381153088|ref|ZP_09864957.1| ABC-type multidrug transport system, ATPase component
[Methylomicrobium album BG8]
gi|380885060|gb|EIC30937.1| ABC-type multidrug transport system, ATPase component
[Methylomicrobium album BG8]
Length = 759
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK------RLRSG 143
+T+GR+PE D+ I VS HAR+ + + + DL+STNGTF++ + RL+ G
Sbjct: 119 LTIGRIPE-CDLEIASPLVSREHARLYCDANGVEIEDLNSTNGTFVNGRQIEGRLRLKQG 177
Query: 144 -VVAVASPGSRIT 155
V++AS G T
Sbjct: 178 DRVSIASFGFLFT 190
>gi|374289845|ref|YP_005036930.1| hypothetical protein BMS_3225 [Bacteriovorax marinus SJ]
gi|301168386|emb|CBW27976.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 759
Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D + + EV +GR P + +V+ VS HA+++K + ++ D+ S NGT ++ +R+
Sbjct: 257 DKYNVEDQEVIIGRDPAKCQIVLNDPEVSSTHAKLKKNNITCILEDMQSGNGTLLNGERV 316
Query: 141 RSGVV 145
V+
Sbjct: 317 NQAVL 321
>gi|383458173|ref|YP_005372162.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
gi|380730807|gb|AFE06809.1| FHA domain containing protein [Corallococcus coralloides DSM 2259]
Length = 302
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
T +GR P D+ IP VSG HA + G + DL S NGTF++ +RL SG
Sbjct: 16 GTRCLLGRHPA-CDVHIPDGRVSGEHASLHWAGAHWELRDLGSRNGTFVEGRRLASGERV 74
Query: 147 VASPGSRITFGDTHLAMFRV 166
G G + + FR+
Sbjct: 75 ELGQGQDFLLGKSGIG-FRL 93
>gi|284927594|gb|ADC29517.1| zeaxanthin epoxidase [Brassica napus]
gi|290783794|gb|ADD62493.1| zeaxanthin epoxidase [Brassica napus]
Length = 669
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 101 MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGSRIT 155
+VIP VS +HAR+ K + V DL S +GT++ + R+ A P I
Sbjct: 575 IVIPSPQVSKMHARVIYKDGAFFVMDLRSEHGTYLTDNEGGKYRVTPNFPARFRPSDIIE 634
Query: 156 FGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSSA 193
FG A FRV I T K +EK D L +A
Sbjct: 635 FGSDKKAAFRVKVIRTT---PKLTRRDEKSDGKLLQAA 669
>gi|297828263|ref|XP_002882014.1| forkhead-associated domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327853|gb|EFH58273.1| forkhead-associated domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 916
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKK------GDSLLVTDLD-STNGTFIDE 137
+ S E +GRLP A I +SG H ++ +K GD + V +D STNGTF++
Sbjct: 92 LTSDEHCLGRLPCHASYQIESNAISGNHCKVYRKRVTGGDGDDVSVFVVDTSTNGTFLNW 151
Query: 138 KRLRSGVVAVASPGSRITFGD 158
+RL+ P R+ GD
Sbjct: 152 QRLKKN-----GPEVRVQHGD 167
>gi|406916970|gb|EKD55862.1| hypothetical protein ACD_59C00015G0003 [uncultured bacterium]
Length = 734
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F I +T+GR E D+ + +VS HARI G S + D STNGT++++++++
Sbjct: 32 FAINKETLTIGRTNEN-DITLTDGSVSSKHARIINDGFSFKIIDNGSTNGTYVNDQKIKE 90
Query: 143 GVV 145
V+
Sbjct: 91 QVL 93
>gi|298346814|ref|YP_003719501.1| FHA domain-containing protein [Mobiluncus curtisii ATCC 43063]
gi|304389481|ref|ZP_07371444.1| FHA domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315655359|ref|ZP_07908259.1| FHA domain protein [Mobiluncus curtisii ATCC 51333]
gi|315656727|ref|ZP_07909614.1| FHA domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|298236875|gb|ADI68007.1| FHA domain protein [Mobiluncus curtisii ATCC 43063]
gi|304327291|gb|EFL94526.1| FHA domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315490299|gb|EFU79924.1| FHA domain protein [Mobiluncus curtisii ATCC 51333]
gi|315492682|gb|EFU82286.1| FHA domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 148
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + + +T GR P ++D+ + TVS H ++ + +V D+ S NGT+ID +R+ S
Sbjct: 64 FLLDTDRITAGRHP-KSDIFLDDVTVSRRHCEFIRQENGYMVRDVGSLNGTYIDRERVES 122
Query: 143 GVVAVASPGSRITFGDTHLAMF 164
++ + G + G LA +
Sbjct: 123 HLL---TSGEEVQIGKFRLAYY 141
>gi|108763814|ref|YP_634701.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467694|gb|ABF92879.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 168
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGTFIDEKRLRSG 143
A EVTVG E D+V+ TVS LHAR++++ + L VTDL+S GT+ D + G
Sbjct: 65 ADAEVTVGSGAE-CDIVLAEPTVSRLHARLRREPHTGLWCVTDLESERGTYQDGVLILPG 123
Query: 144 VVAVASPGSRITFGDTHLAMFRVSKID 170
A SR+T G+ L + +
Sbjct: 124 RPAPLLCRSRLTLGNVELLFLQTYAFE 150
>gi|116750855|ref|YP_847542.1| FHA domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116699919|gb|ABK19107.1| FHA domain containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 244
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+++GR + D+VI VS HA+I D L+TDLDS NGT+++E + S + S
Sbjct: 24 LSIGR-EKSNDVVIDNLGVSRFHAKIDSVDDRFLLTDLDSKNGTYVNEAPVTSHWL---S 79
Query: 150 PGSRITFGDTHLAM 163
G IT G LA
Sbjct: 80 HGEVITIGKYTLAF 93
>gi|404330994|ref|ZP_10971442.1| hypothetical protein SvinD2_12948 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 226
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 86 ASTEVTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
S V +GR P++ D+VI V +HA I K + DLDS NGT+I+ ++++ G
Sbjct: 149 GSEPVRIGRDPDQCDLVIANDGYVGRVHALIYTKSGKYYLVDLDSKNGTYIESRQVK-GQ 207
Query: 145 VAVASPGSRITFGDTHLAM 163
+A+ G G T L +
Sbjct: 208 EELAA-GQYFKIGKTELVV 225
>gi|284988668|ref|YP_003407222.1| FHA domain containing protein [Geodermatophilus obscurus DSM 43160]
gi|284061913|gb|ADB72851.1| FHA domain containing protein [Geodermatophilus obscurus DSM 43160]
Length = 154
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 112 HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
HAR+ +G V DL STNGT++D++R++ + + PG I G T L +
Sbjct: 103 HARLTNRGGQWYVEDLGSTNGTYLDQQRVQGPL--LVGPGQPIRIGQTALEL 152
>gi|427390828|ref|ZP_18885234.1| hypothetical protein HMPREF9233_00737 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732564|gb|EKU95372.1| hypothetical protein HMPREF9233_00737 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 231
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D + + T +GR + D+ I + VS H +Q + ++ TDLDSTNGT+++ R+
Sbjct: 147 DRYILTGTTTIIGRGSD-CDITIDDSGVSRRHLELQVTPNGVIATDLDSTNGTYVEGHRV 205
Query: 141 RSGVVAVASPGSRITFGDTHLAMF 164
+ A G+ IT G TH+ +
Sbjct: 206 PA---ATLVDGNTITIGRTHIMFW 226
>gi|22298872|ref|NP_682119.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus
BP-1]
gi|22295053|dbj|BAC08881.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus
BP-1]
Length = 1009
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+V +GR P DMV+ VS HAR+ + + DL+S NGTF++ +RL V
Sbjct: 247 QVRIGRDPSN-DMVLDHPVVSRFHARLYLQEGQWYLVDLESANGTFVNNRRLEPRKPVVL 305
Query: 149 SPGSRITFG 157
G+ + G
Sbjct: 306 PTGALVRIG 314
>gi|422301966|ref|ZP_16389330.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9806]
gi|389788949|emb|CCI15123.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9806]
Length = 343
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ T T+GR + D+VI +S HA +Q + GD L+ DL S NGTF++ +R+
Sbjct: 24 LGRTYWTIGRSKDN-DIVIKDHCISRNHAILQSTETGDFYLI-DLGSRNGTFVNGRRVAI 81
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
V + RITFG T + +R + + + P E
Sbjct: 82 PVTIYNT--DRITFGKTEVQFYRPTATNIGKQPRNLE 116
>gi|383456602|ref|YP_005370591.1| sensor histidine kinase [Corallococcus coralloides DSM 2259]
gi|380732140|gb|AFE08142.1| sensor histidine kinase [Corallococcus coralloides DSM 2259]
Length = 597
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 80 PD--AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
PD ++ + +T+GR ++ + IP ++S HARI+ VTDL S NGTF++
Sbjct: 9 PDELSYPLGDAPITIGRADDQG-ICIPHRSLSRQHARIEPSDGRFFVTDLQSKNGTFVNG 67
Query: 138 KRLRSGVVAVASPGSRITFGD 158
++R + PG +T G+
Sbjct: 68 VQIRRKEL---RPGDTLTLGE 85
>gi|440503144|gb|AGC09679.1| putative FHA domain-containing protein [uncultured bacterium]
Length = 279
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F I TVGR + D+VI VS HAR + D+L + DL+STNGT I+ K +R+
Sbjct: 194 FVIRKAVTTVGRALDN-DIVIESGDVSRHHARFEYIDDALRLVDLNSTNGTRINGKSVRA 252
Query: 143 GVVAVASPGSRITFG 157
+ G +TFG
Sbjct: 253 Q--STVRTGDEVTFG 265
>gi|256004188|ref|ZP_05429171.1| FHA domain containing protein [Clostridium thermocellum DSM 2360]
gi|385777964|ref|YP_005687129.1| FHA domain-containing protein [Clostridium thermocellum DSM 1313]
gi|419722000|ref|ZP_14249152.1| Forkhead-associated protein [Clostridium thermocellum AD2]
gi|419726975|ref|ZP_14253985.1| Forkhead-associated protein [Clostridium thermocellum YS]
gi|255991778|gb|EEU01877.1| FHA domain containing protein [Clostridium thermocellum DSM 2360]
gi|316939644|gb|ADU73678.1| FHA domain containing protein [Clostridium thermocellum DSM 1313]
gi|380769561|gb|EIC03471.1| Forkhead-associated protein [Clostridium thermocellum YS]
gi|380782039|gb|EIC11685.1| Forkhead-associated protein [Clostridium thermocellum AD2]
Length = 149
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I VTVGR ++ D+VI +SG+HA I + ++ + D+ S NGTF++ RL G
Sbjct: 67 ILRKSVTVGR-NDKNDIVIKDPFISGIHAYIMTENGTVRIKDMGSKNGTFVNGVRLNEGE 125
Query: 145 VAVASPGSRITFGDTHLAM 163
G I G+
Sbjct: 126 EVPLKDGDNIKIGNVKFLF 144
>gi|108763994|ref|YP_632814.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467874|gb|ABF93059.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 581
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ F ++ E +GR + A + IP +VS H ++K G V+DL S NGT I+
Sbjct: 57 EEFALSEEEYVIGRATDNA-ICIPDTSVSRKHVMVRKSGAGWAVSDLGSGNGTLIN---- 111
Query: 141 RSGVVAVASP---GSRITFGDTHL 161
VV +P G IT GDT L
Sbjct: 112 -GDVVNEETPLANGDVITLGDTEL 134
>gi|125975524|ref|YP_001039434.1| FHA domain-containing protein [Clostridium thermocellum ATCC 27405]
gi|125715749|gb|ABN54241.1| FHA domain containing protein [Clostridium thermocellum ATCC 27405]
Length = 174
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I VTVGR ++ D+VI +SG+HA I + ++ + D+ S NGTF++ RL G
Sbjct: 92 ILRKSVTVGR-NDKNDIVIKDPFISGIHAYIMTENGTVRIKDMGSKNGTFVNGVRLNEGE 150
Query: 145 VAVASPGSRITFGDT 159
G I G+
Sbjct: 151 EVPLKDGDNIKIGNV 165
>gi|388579770|gb|EIM20090.1| SMAD/FHA domain-containing protein [Wallemia sebi CBS 633.66]
Length = 397
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 13/82 (15%)
Query: 71 SHIGFKVPMPDAFEIA------STEVTVGR------LPERADMVIPVATVSGLHARIQKK 118
SH+ F +P+ ++FE+ + +V +GR LP++++ +S HA I
Sbjct: 2 SHL-FLIPLNNSFELKIIALADNEKVKIGRQTNQRTLPKQSNGYFDSKVLSRQHAEIWSA 60
Query: 119 GDSLLVTDLDSTNGTFIDEKRL 140
+ + + D+ S+NGTF++ +RL
Sbjct: 61 NNKIYIKDVKSSNGTFLNNERL 82
>gi|415721050|ref|ZP_11468294.1| hypothetical protein CGSMWGv00703Bmash_02429 [Gardnerella vaginalis
00703Bmash]
gi|415724573|ref|ZP_11469951.1| hypothetical protein CGSMWGv00703C2mash_04506 [Gardnerella
vaginalis 00703C2mash]
gi|388061311|gb|EIK83968.1| hypothetical protein CGSMWGv00703Bmash_02429 [Gardnerella vaginalis
00703Bmash]
gi|388062369|gb|EIK84986.1| hypothetical protein CGSMWGv00703C2mash_04506 [Gardnerella
vaginalis 00703C2mash]
Length = 146
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
V+VGR RAD+++ +TVS HA ++ G+ + D S NGT+++ R+ AV +
Sbjct: 68 VSVGR-DSRADIMLDDSTVSRAHAVFRRNGNVFSIADAGSLNGTYVNRNRVDE---AVLN 123
Query: 150 PGSRITFGDTHLAMFRVSKI 169
G I G L F S +
Sbjct: 124 NGDEIMIGKYRLMFFTQSAV 143
>gi|357406279|ref|YP_004918203.1| phosphonate-transporting ATPase [Methylomicrobium alcaliphilum 20Z]
gi|351718944|emb|CCE24618.1| putative Phosphonate-transporting ATPase [Methylomicrobium
alcaliphilum 20Z]
Length = 773
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+T+GRLP+ D+ IP VS HA++ ++ ++ D STNGTF++ R+
Sbjct: 135 LTIGRLPQ-CDITIPSPLVSREHAKLTRESTGWVIEDCGSTNGTFVNAVRI 184
>gi|160893582|ref|ZP_02074366.1| hypothetical protein CLOL250_01136 [Clostridium sp. L2-50]
gi|156864567|gb|EDO57998.1| FHA domain protein [Clostridium sp. L2-50]
Length = 491
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 90 VTVGRLP------ERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
V V R+P + AD + ++S +HA++ + ++ D++STNGT +++ L+ G
Sbjct: 409 VYVTRIPALIGRGDMADCRLHGESISRVHAKLAYADANFILEDIESTNGTCVNDYPLKKG 468
Query: 144 VVAVASPGSRITFGDTHLAMFRVS 167
+ PG ++FG FRV
Sbjct: 469 YPVLLFPGDEVSFGSERYE-FRVC 491
>gi|359765370|ref|ZP_09269201.1| hypothetical protein GOPIP_019_00720 [Gordonia polyisoprenivorans
NBRC 16320]
gi|378715581|ref|YP_005280470.1| FHA domain-containing protein [Gordonia polyisoprenivorans VH2]
gi|359317304|dbj|GAB22034.1| hypothetical protein GOPIP_019_00720 [Gordonia polyisoprenivorans
NBRC 16320]
gi|375750284|gb|AFA71104.1| FHA domain-containing protein [Gordonia polyisoprenivorans VH2]
Length = 154
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 82 AFEIASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
A +A+T +T+G P RAD +V+ S HAR+ ++GD V DL STNGT++
Sbjct: 67 AGALANTRITLGTQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYL 126
Query: 136 DEKRLRSGV-VAVASP 150
D ++ + V V +++P
Sbjct: 127 DRSKVTTAVKVPLSTP 142
>gi|358061500|ref|ZP_09148154.1| hypothetical protein HMPREF9473_00216 [Clostridium hathewayi
WAL-18680]
gi|356700259|gb|EHI61765.1| hypothetical protein HMPREF9473_00216 [Clostridium hathewayi
WAL-18680]
Length = 138
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+PD IA +G+ D V+ TVS LH RI +K +TDL+STNGT + +
Sbjct: 54 IPDIV-IAYYPFIIGKQENLVDFVMAQDTVSRLHLRIDEKDGVYQITDLNSTNGTGVAGR 112
Query: 139 RLRSGVVAVASPGSRIT 155
L + PG +T
Sbjct: 113 ILENNESTEVHPGDEVT 129
>gi|443729762|gb|ELU15565.1| hypothetical protein CAPTEDRAFT_220183 [Capitella teleta]
Length = 537
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 68 GDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVA-TVSGLHARIQKKGDSLLVTD 126
GD S + + D T+VT+GRL E D+V+ + VS H +KK + ++ D
Sbjct: 13 GDESSARLVIDLED-----QTQVTMGRL-ETNDVVLDESLAVSRHHIYFEKKDNIWMIKD 66
Query: 127 LDSTNGTFIDEKRLRSGVV 145
L+S NGT+I++ R+ GV+
Sbjct: 67 LNSGNGTYINDVRIDPGVL 85
>gi|440681874|ref|YP_007156669.1| FHA domain containing protein [Anabaena cylindrica PCC 7122]
gi|428678993|gb|AFZ57759.1| FHA domain containing protein [Anabaena cylindrica PCC 7122]
Length = 296
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 235 VSRIHADIRVEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 291
>gi|405375772|ref|ZP_11029794.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397085937|gb|EJJ17095.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 743
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 77 VPMPDAFE---IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
V +PD E + E+ +GR + D+++ VS HAR+ ++G ++ + D+ S NGT
Sbjct: 6 VRLPDGTENEYAITGELKLGR-QQGCDILLTEGGVSRTHARVFEEGGTVFIDDVGSANGT 64
Query: 134 FIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
F+D KR+ +P S + GD L +
Sbjct: 65 FVDGKRIMEP--TALTPQSEVLLGDYTLTL 92
>gi|339446242|ref|YP_004712246.1| hypothetical protein EGYY_28710 [Eggerthella sp. YY7918]
gi|338905994|dbj|BAK45845.1| hypothetical protein EGYY_28710 [Eggerthella sp. YY7918]
Length = 137
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
V VGR P AD+V+ VSG HAR G +L V DL STNGT ++ +
Sbjct: 64 VIVGRSPG-ADIVVGAGYVSGRHARFSLMGQNLFVEDLGSTNGTAVNGQ 111
>gi|21112666|gb|AAM40880.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 429
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 306 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 362
Query: 159 THLAMFRVSKI 169
H + V KI
Sbjct: 363 RHRFVVEVPKI 373
>gi|358012067|ref|ZP_09143877.1| FHA domain protein [Acinetobacter sp. P8-3-8]
Length = 248
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 60 WLLQPV-GDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
W LQ + G+ D + + M +GR + AD+V+ A +S HA K
Sbjct: 3 WKLQAITGEFDGQEVAIERDM-----------LIGR-HQDADLVLQSAEISRRHAAFLLK 50
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTV 172
D+L V DL S+NGTF+++ R+ + G + F + +KI++V
Sbjct: 51 DDALWVQDLKSSNGTFVNDIRIEHD--KMLKDGDIVQFASIKFNVLAPAKIESV 102
>gi|309791941|ref|ZP_07686422.1| hypothetical protein OSCT_2373 [Oscillochloris trichoides DG-6]
gi|308226028|gb|EFO79775.1| hypothetical protein OSCT_2373 [Oscillochloris trichoides DG6]
Length = 313
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I + + +GR PE + + I VS HARI G L++DL S+ GT++++ RL + V
Sbjct: 50 IGAEPLVIGRRPE-SSLCINDPRVSRSHARIVWDGQGFLLSDLGSSGGTYLNQSRLIAPV 108
Query: 145 VAVASPGSRITFGD 158
PG +I G+
Sbjct: 109 --YIRPGDQIGLGN 120
>gi|86157694|ref|YP_464479.1| hypothetical protein Adeh_1268 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774205|gb|ABC81042.1| hypothetical protein Adeh_1268 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 270
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 69 DTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLD 128
D + G ++P+ + T+GR RAD+ +P A S LHAR++ +G ++ V DL
Sbjct: 133 DGAAAGARLPL-------GPDQTLGR-SRRADLRLPDAQASRLHARVRVRGGAVTVEDLG 184
Query: 129 STNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
+ NG ++ + G A+A PG + G LA+
Sbjct: 185 AKNGLRVNGVAVDRGPRALA-PGDELEVGGCALALV 219
>gi|425445804|ref|ZP_18825824.1| Adenylate cyclase [Microcystis aeruginosa PCC 9443]
gi|389734102|emb|CCI02188.1| Adenylate cyclase [Microcystis aeruginosa PCC 9443]
Length = 353
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
T+GR + A +VI +S HA +Q + GD L+ DL S NGTF++ +R VA
Sbjct: 44 TIGRSKDNA-IVIKDQCISRNHAILQSTETGDFYLI-DLGSRNGTFVNGRR-------VA 94
Query: 149 SPGS-----RITFGDTHLAMFRVSKIDTVEAPSKTE 179
PG+ RITFG T + +R + + + P E
Sbjct: 95 IPGTIHDKDRITFGKTEVQFYRPTPTNIGKQPHNLE 130
>gi|405981895|ref|ZP_11040221.1| hypothetical protein HMPREF9240_01227 [Actinomyces neuii BVS029A5]
gi|404391790|gb|EJZ86853.1| hypothetical protein HMPREF9240_01227 [Actinomyces neuii BVS029A5]
Length = 173
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
G K+P+ S + +GR P +V+ + S HAR+ G S V D++STNG
Sbjct: 91 GTKMPL------GSAAIVIGRSPA-CTLVVDDSYASSQHARLYLAGGSWHVEDMNSTNGV 143
Query: 134 FIDEKRLRSGVVAVASP-----GSRITFGDTHLAMFR 165
F+D +R ++SP G++I G T L + R
Sbjct: 144 FVDGER-------ISSPRPVGLGNQIRIGQTTLELTR 173
>gi|388257254|ref|ZP_10134433.1| FHA domain protein [Cellvibrio sp. BR]
gi|387938421|gb|EIK44973.1| FHA domain protein [Cellvibrio sp. BR]
Length = 297
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
T+GR E D+ +P A +S HA++Q L V DLDS NGTF++ KR+
Sbjct: 140 TIGRSNE-CDISLPAAHLSRRHAQLQVIDGMLFVKDLDSANGTFLNGKRV 188
>gi|365089328|ref|ZP_09328204.1| FHA domain-containing protein [Acidovorax sp. NO-1]
gi|363416736|gb|EHL23834.1| FHA domain-containing protein [Acidovorax sp. NO-1]
Length = 215
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
T+GR P D+VI VSG HA I GD + + DL STNGT+++ K ++
Sbjct: 21 TLGRRPYN-DIVIDNLAVSGEHAVIHMTGDDVEIEDLGSTNGTYVNAKAVK 70
>gi|427713192|ref|YP_007061816.1| FHA domain-containing protein [Synechococcus sp. PCC 6312]
gi|427377321|gb|AFY61273.1| FHA domain-containing protein [Synechococcus sp. PCC 6312]
Length = 230
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 72 HIGFKVPMPDAFEIASTEV--TVGRLPERADMV-IPVA-TVSGLHARIQKKGDSLLVTDL 127
HI K+P+P +A + R+P D+ P + VS +HA + G+++L+ D+
Sbjct: 128 HIQTKIPVPIPTGLAVIHIGKPNDRIPPNIDLSGFPNSEIVSRIHADLCLDGETILLEDV 187
Query: 128 DSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
S NGT+++ + L G G RI FG L F
Sbjct: 188 GSANGTYVNNQPLPPGNRYSLKNGDRIAFGKGDLVTF 224
>gi|291336361|gb|ADD95919.1| hypothetical protein [uncultured organism MedDCM-OCT-S01-C81]
Length = 637
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
FE+ TE+ +GR P+ A + I +VS HA+I +G S V DL S NGT ++ ++
Sbjct: 196 FELDHTEMVIGRTPDNA-IRIDHRSVSRHHAKIVCRGQSFRVVDLGSANGTLVNSEQY 252
>gi|239629074|ref|ZP_04672105.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519220|gb|EEQ59086.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 490
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
+G+ AD + TVS H RI +G+ VTDL+STNGT ++ K L + +V
Sbjct: 417 VIGKNKNLADYTLQKDTVSRFHLRIDNEGEIYTVTDLNSTNGTRVNGKALDANGTSVIET 476
Query: 151 GSRITFGDT 159
G + D
Sbjct: 477 GDELYIADV 485
>gi|440783641|ref|ZP_20961254.1| FHA domain-containing protein [Clostridium pasteurianum DSM 525]
gi|440219384|gb|ELP58597.1| FHA domain-containing protein [Clostridium pasteurianum DSM 525]
Length = 222
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 42 ADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADM 101
A T T T + E +++ + S G++ F + + +GR + D+
Sbjct: 102 ASEEITGGETETLYSKEEEIIKKYAVVEYSENGYE----KEFIMTENIICIGRDNDSCDL 157
Query: 102 VIPVATVSG-LHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
VI G HA + K SL DL+S NG+FI+EKRL
Sbjct: 158 VINDDKFVGRQHALLYYKNSSLYFVDLNSRNGSFIEEKRL 197
>gi|258515523|ref|YP_003191745.1| FHA domain-containing protein [Desulfotomaculum acetoxidans DSM
771]
gi|257779228|gb|ACV63122.1| FHA domain-containing protein [Desulfotomaculum acetoxidans DSM
771]
Length = 279
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F++ + +GR + D+V+ +++S HA ++K G ++ DL+STNGTFI+ ++
Sbjct: 200 FQLTQDKFVIGR-DQDCDIVLSDSSISRRHAVLEKTGKLYVIRDLNSTNGTFINGVKITE 258
Query: 143 GVVAVASPGSRITFGDT 159
++ P I G T
Sbjct: 259 KII---QPEDEIKLGTT 272
>gi|113474398|ref|YP_720459.1| FHA domain-containing protein [Trichodesmium erythraeum IMS101]
gi|110165446|gb|ABG49986.1| FHA domain containing protein [Trichodesmium erythraeum IMS101]
Length = 272
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLA--MFR 165
VS HA I+ +GDS + D S+NGT+I+ L G PG RI+ G L +F+
Sbjct: 211 VSRSHADIRVEGDSYYIEDTGSSNGTYINNTPLTKGNRHKLRPGDRISLGKGDLVSFLFQ 270
Query: 166 VS 167
+S
Sbjct: 271 IS 272
>gi|224286748|gb|ACN41077.1| unknown [Picea sitchensis]
Length = 356
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
D+V+ A++S HA+++ G++L++TDL S +GTF++ K L SG V + FG
Sbjct: 285 CDVVLDHASISRQHAKMEVVGNTLILTDLRSCHGTFLNGKLLESGQKIVLIDLDDVRFG 343
>gi|310287458|ref|YP_003938716.1| signal transduction protein GarA [Bifidobacterium bifidum S17]
gi|313140239|ref|ZP_07802432.1| FHA domain-containing protein [Bifidobacterium bifidum NCIMB 41171]
gi|390936829|ref|YP_006394388.1| putative signal transduction protein [Bifidobacterium bifidum BGN4]
gi|421734607|ref|ZP_16173671.1| putative signal transduction protein [Bifidobacterium bifidum LMG
13195]
gi|309251394|gb|ADO53142.1| signal transduction protein GarA [Bifidobacterium bifidum S17]
gi|313132749|gb|EFR50366.1| FHA domain-containing protein [Bifidobacterium bifidum NCIMB 41171]
gi|389890442|gb|AFL04509.1| putative signal transduction protein [Bifidobacterium bifidum BGN4]
gi|407077411|gb|EKE50253.1| putative signal transduction protein [Bifidobacterium bifidum LMG
13195]
Length = 145
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EVTVGR RAD+++ +TVS HA ++ GD+ V D S NGT+++ +R+ +
Sbjct: 67 EVTVGR-DSRADILLDDSTVSRSHAVFRRVGDTFAVYDSGSLNGTYVNRQRVDHQQL--- 122
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S +
Sbjct: 123 RNGDEIMIGKFRLVFFTKSAV 143
>gi|91790506|ref|YP_551458.1| FHA domain-containing protein [Polaromonas sp. JS666]
gi|91699731|gb|ABE46560.1| FHA domain containing protein [Polaromonas sp. JS666]
Length = 225
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
++GR P D+VI VSG HA +Q G+ + + DL+STNGT+++ K ++
Sbjct: 24 SLGRRPYN-DIVIDNLAVSGEHAVLQMSGNEVYLEDLNSTNGTYVNGKAVK 73
>gi|403727949|ref|ZP_10947862.1| hypothetical protein GORHZ_167_00120 [Gordonia rhizosphera NBRC
16068]
gi|403203701|dbj|GAB92193.1| hypothetical protein GORHZ_167_00120 [Gordonia rhizosphera NBRC
16068]
Length = 154
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRITLGTQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RLRSGV-VAVASP 150
++ + V V +++P
Sbjct: 130 KVTTAVKVPLSTP 142
>gi|359771067|ref|ZP_09274532.1| hypothetical protein GOEFS_023_00270 [Gordonia effusa NBRC 100432]
gi|359311818|dbj|GAB17310.1| hypothetical protein GOEFS_023_00270 [Gordonia effusa NBRC 100432]
Length = 151
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 67 LANTRITLGEQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRA 126
Query: 139 RLRSGV-VAVASP 150
++ + V V + +P
Sbjct: 127 KVTTAVRVPINTP 139
>gi|311742450|ref|ZP_07716259.1| FHA-domain-containing protein [Aeromicrobium marinum DSM 15272]
gi|311314078|gb|EFQ83986.1| FHA-domain-containing protein [Aeromicrobium marinum DSM 15272]
Length = 147
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 80 PDA---FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
PDA F + S +++VGR P+ A + + +VS HA ++ V DL S NGT+++
Sbjct: 55 PDAGARFLLDSDDISVGRHPDSA-IFLDDISVSRRHAVFRRTDVGFTVADLGSLNGTYVN 113
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMF 164
R+ V V S G + FG L F
Sbjct: 114 RDRIDGDV--VLSGGDEVQFGKYRLIYF 139
>gi|440683445|ref|YP_007158240.1| Forkhead-associated protein [Anabaena cylindrica PCC 7122]
gi|428680564|gb|AFZ59330.1| Forkhead-associated protein [Anabaena cylindrica PCC 7122]
Length = 184
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P R D+V+ TVSGLH I + + +L +N ID K L G V +
Sbjct: 31 VRIGRDPLRCDIVLTHPTVSGLHVEIFFHSQQQRFYIRNLRESNPAQIDGKSLIQGEV-I 89
Query: 148 ASPGSRITFGDTHLAMFRVSKIDTVEA 174
+ GS I G L + +S I+++ A
Sbjct: 90 LNKGSIIYLGQQQLQVTEIS-INSIPA 115
>gi|281419444|ref|ZP_06250458.1| FHA domain containing protein [Clostridium thermocellum JW20]
gi|281406850|gb|EFB37114.1| FHA domain containing protein [Clostridium thermocellum JW20]
Length = 174
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I VTVGR ++ D+VI +SG+HA I + ++ + D+ S NGTF++ RL G
Sbjct: 92 ILRKSVTVGR-NDKNDIVIKDPFISGIHAYIMTENGTVRIKDMGSKNGTFVNGVRLNEGE 150
Query: 145 VAVASPGSRITFGDT 159
G I G+
Sbjct: 151 EVPLKDGDNIKIGNV 165
>gi|428315232|ref|YP_007113114.1| FHA domain containing protein [Oscillatoria nigro-viridis PCC 7112]
gi|428238912|gb|AFZ04698.1| FHA domain containing protein [Oscillatoria nigro-viridis PCC 7112]
Length = 263
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA ++ +GD+ + D+ S+NGT+++ L G PG RI+ G L F
Sbjct: 202 VSRVHANLRVEGDACYLEDVGSSNGTYVNNTPLPKGNRHRLRPGDRISLGKGDLVTF 258
>gi|334117781|ref|ZP_08491872.1| FHA domain containing protein [Microcoleus vaginatus FGP-2]
gi|333460890|gb|EGK89498.1| FHA domain containing protein [Microcoleus vaginatus FGP-2]
Length = 262
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA ++ +GD+ + D+ S+NGT+++ L G PG RI+ G L F
Sbjct: 201 VSRVHANLRVEGDACYLEDVGSSNGTYVNNTPLPKGNRHRLRPGDRISLGKGDLVTF 257
>gi|227487479|ref|ZP_03917795.1| FHA-domain protein [Corynebacterium glucuronolyticum ATCC 51867]
gi|227541208|ref|ZP_03971257.1| FHA-domain protein [Corynebacterium glucuronolyticum ATCC 51866]
gi|227092560|gb|EEI27872.1| FHA-domain protein [Corynebacterium glucuronolyticum ATCC 51867]
gi|227182981|gb|EEI63953.1| FHA-domain protein [Corynebacterium glucuronolyticum ATCC 51866]
Length = 141
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
TEVT+GR P +I SG HAR+ +G+ ++ DLDS NGTF++ ++
Sbjct: 67 TEVTLGRSPSNTFPLID-DFASGTHARLTHRGNDWIIEDLDSRNGTFVNGYKI 118
>gi|427718540|ref|YP_007066534.1| GAF sensor-containing adenylate/guanylate cyclase [Calothrix sp.
PCC 7507]
gi|427350976|gb|AFY33700.1| adenylate/guanylate cyclase with GAF sensor and FHA domain
[Calothrix sp. PCC 7507]
Length = 539
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLL-VTDLDSTNGTFIDE------KRLRSG 143
T+GRLPE ++ +P VS HAR+ KK D++ + DL S NGT ++E + LR G
Sbjct: 25 TIGRLPE-CNLYLPFGGVSRNHARLVKKADNVWTIEDLGSKNGTQVNECLVTYPQELRHG 83
>gi|22299034|ref|NP_682281.1| penicillin-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295216|dbj|BAC09043.1| penicillin-binding protein [Thermosynechococcus elongatus BP-1]
Length = 744
Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS--LLVTDLDSTNGTFIDEKRL 140
F + +GR RAD++I VSG HAR+++ + + DLDSTNG + +RL
Sbjct: 54 FPLVGDRYILGRSQSRADIMIDAEIVSGTHARLKRLTPTGVFEIQDLDSTNGIYRQRQRL 113
Query: 141 RSG 143
+ G
Sbjct: 114 QMG 116
>gi|405356452|ref|ZP_11025421.1| hypothetical protein A176_1556 [Chondromyces apiculatus DSM 436]
gi|397090496|gb|EJJ21351.1| hypothetical protein A176_1556 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 508
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
I+S T+GR P R +V+ VS HA + + GD + + DL+S+NGT+ + +R+
Sbjct: 427 ISSERFTIGRGP-RCSLVVRSERVSREHAVVTRVGDEVFIEDLNSSNGTWFNNERI 481
>gi|385652007|ref|ZP_10046560.1| FHA domain, partial [Leucobacter chromiiresistens JG 31]
Length = 159
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERAD------MVIPVATVSGLHARIQKKGDSLLVTDL 127
G ++P + E+ ++ +GR PE D + P T S HAR+++ GDS + DL
Sbjct: 58 GIELPGGETLELEGDDIVIGRKPEPRDGSTVLQISDPTRTTSKSHARLRRDGDSWTIEDL 117
Query: 128 DSTNGTFI 135
STNG +
Sbjct: 118 QSTNGVSL 125
>gi|374296897|ref|YP_005047088.1| FHA domain-containing protein [Clostridium clariflavum DSM 19732]
gi|359826391|gb|AEV69164.1| FHA domain-containing protein [Clostridium clariflavum DSM 19732]
Length = 527
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 69 DTSHIGFKVPMPDAFE---IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVT 125
D H +V D E I +GRL + D V + +HA I + +
Sbjct: 427 DVKHARLQVIKDDGIEEIIINKPSFIIGRLEGQVDYVHTNNAIGKVHAEIITRDGCYYLK 486
Query: 126 DLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
DL+S NGT+I+ KR+ S RIT ++
Sbjct: 487 DLNSKNGTYINGKRIDSNKEYEIKNNDRITLANSEFIF 524
>gi|225874277|ref|YP_002755736.1| GAF/FHA/SpoE domain-containing protein [Acidobacterium capsulatum
ATCC 51196]
gi|225793281|gb|ACO33371.1| GAF/FHA/SpoE domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 533
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D+ I +T+GRLPE D+V+ VS HA I + G + + D DS +GTF + +R+
Sbjct: 18 DSGTITRLPLTIGRLPEN-DIVLAHPYVSRRHAEIVRDGSTYYIVDSDSRHGTFWNGQRV 76
Query: 141 RSGVVAVASPGSRITFG--DTHLAMFRVS 167
SG A+ + G + FG D L F VS
Sbjct: 77 -SGRKALHT-GDTLAFGTPDGPLLHFGVS 103
>gi|354566736|ref|ZP_08985907.1| FHA domain containing protein [Fischerella sp. JSC-11]
gi|353544395|gb|EHC13849.1| FHA domain containing protein [Fischerella sp. JSC-11]
Length = 308
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +H+ I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 247 VSRIHSDIRVEGDAYYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 303
>gi|338534292|ref|YP_004667626.1| FHA domain- TPR-repeat-containing protein [Myxococcus fulvus HW-1]
gi|337260388|gb|AEI66548.1| FHA domain- TPR-repeat-containing protein [Myxococcus fulvus HW-1]
Length = 738
Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ F IA E+ +GR + +D++I VS HAR+ ++G ++ + D+ S NGTF+D +R+
Sbjct: 14 NEFAIAG-ELKIGR-QQGSDILITEGGVSRTHARVFEEGGAVFIDDVGSANGTFVDGQRI 71
Query: 141 RSGVVAVASPGSRITFGD 158
+ +P S + GD
Sbjct: 72 MAP--TALTPQSEVLLGD 87
>gi|398787097|ref|ZP_10549601.1| ABC transporter ATP-binding protein [Streptomyces auratus AGR0001]
gi|396993259|gb|EJJ04338.1| ABC transporter ATP-binding protein [Streptomyces auratus AGR0001]
Length = 845
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S VGR P+ DMV+ A VS HA ++ G S ++ D STNGT++ +R+ +
Sbjct: 18 SRSYNVGRDPQ-GDMVLDDARVSWRHATLRWAGRSWIIEDQGSTNGTYVQGQRIHQMEIG 76
Query: 147 VASPGSRITFGD 158
PGS + G+
Sbjct: 77 ---PGSTVHLGN 85
>gi|379056572|ref|ZP_09847098.1| FHA domain-containing protein [Serinicoccus profundi MCCC 1A05965]
Length = 153
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + + EVT GR P +D+ + TVS HA+ K+ D V D+ S NGT+++ +R+
Sbjct: 72 FLLDADEVTSGRHPH-SDIFLDDVTVSRRHAQFVKEQDGYAVRDVGSLNGTYVNRQRIEE 130
Query: 143 GVVAVASPGSRITFGDTHLAMFR 165
+ + G + G L +R
Sbjct: 131 MPL---NQGDEVQIGKFRLVYYR 150
>gi|220908105|ref|YP_002483416.1| FHA domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864716|gb|ACL45055.1| FHA domain containing protein [Cyanothece sp. PCC 7425]
Length = 263
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 107 TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S NGT+++ L G PG RI G L F
Sbjct: 201 VVSRIHADIRVEGDTFYIEDVGSANGTYVNSLPLPPGNRHRMRPGDRIALGKGDLVSF 258
>gi|432098089|gb|ELK27976.1| Forkhead-associated domain-containing protein 1 [Myotis davidii]
Length = 1358
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEK 138
D F + + T+GR E +D+V+ + HA I+ + S ++ D +S NGTF+++
Sbjct: 9 DGFFVLNKSTTIGR-HEDSDLVLESKDIDNHHALIEYNEAESSFVLQDFNSRNGTFVNDC 67
Query: 139 RLRSGVVAVASPGSRITFG 157
+++ V + PG R+ FG
Sbjct: 68 HIQNVAVKLL-PGDRLRFG 85
>gi|15897954|ref|NP_342559.1| hypothetical protein SSO1088 [Sulfolobus solfataricus P2]
gi|284173929|ref|ZP_06387898.1| hypothetical protein Ssol98_04620 [Sulfolobus solfataricus 98/2]
gi|384434512|ref|YP_005643870.1| FHA domain-containing protein [Sulfolobus solfataricus 98/2]
gi|13814279|gb|AAK41349.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602666|gb|ACX92269.1| FHA domain containing protein [Sulfolobus solfataricus 98/2]
Length = 209
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 69 DTSHIGF-KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDL 127
+T + F K +P F+I + +++GR PE +VIP VS HA I + + L + DL
Sbjct: 110 NTPNPAFNKTKLPLDFDIFPS-ISIGRSPENV-IVIPDPEVSRKHAIISFENNELYLEDL 167
Query: 128 DSTNGTFIDEKRLRSGV 144
+STNGT++ + ++ V
Sbjct: 168 NSTNGTYVYDGKVFQPV 184
>gi|383452899|ref|YP_005366888.1| sensory box histidine kinase/response regulator [Corallococcus
coralloides DSM 2259]
gi|380732784|gb|AFE08786.1| sensory box histidine kinase/response regulator [Corallococcus
coralloides DSM 2259]
Length = 755
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDEKRL 140
A+ + E +GR E A++ I VS HARI +K D S LVTDL+STNGTF++ +
Sbjct: 40 AYRLEPGEHVIGRGSE-AEVRIDDHGVSRKHARILRKSDGSCLVTDLESTNGTFLNGLPV 98
Query: 141 RSGVVAVASPGSRITFGDTHLAMFRVSKIDTVE 173
+ A G R+ G + +FR S+ + +E
Sbjct: 99 ST---AELQEGDRLQVGT--VTVFRFSRREVLE 126
>gi|145592608|ref|YP_001156905.1| FHA domain-containing protein [Salinispora tropica CNB-440]
gi|145301945|gb|ABP52527.1| FHA domain containing protein [Salinispora tropica CNB-440]
Length = 262
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 97 ERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA-SPGSRIT 155
++A + +P +S HAR+ G +++TDL STNGT ++ +R V AVA +PG I
Sbjct: 195 DQATLRLPDVGISRRHARLDFDGGQVVLTDLGSTNGTMVNGQR----VSAVALNPGDMIQ 250
Query: 156 FGDTHLAMFRV 166
G T L FRV
Sbjct: 251 LGTTTLT-FRV 260
>gi|347754596|ref|YP_004862160.1| FHA domain-containing protein [Candidatus Chloracidobacterium
thermophilum B]
gi|347587114|gb|AEP11644.1| FHA domain protein [Candidatus Chloracidobacterium thermophilum B]
Length = 153
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
+ +EI E+T+GR D+ P +SG HARI ++GD ++ D +S NGTF
Sbjct: 75 EVYEIKGDELTIGR--NSGDIRFPHDGYMSGRHARIIRRGDEFILQDDNSRNGTF 127
>gi|357391349|ref|YP_004906190.1| hypothetical protein KSE_44510 [Kitasatospora setae KM-6054]
gi|311897826|dbj|BAJ30234.1| hypothetical protein KSE_44510 [Kitasatospora setae KM-6054]
Length = 194
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
++ +PD A + +GR+ +D+ + +TVS HA ++ + ++ DL S+NGTF+
Sbjct: 110 RLRLPDP---AVRRLRIGRMTG-SDLRLGDSTVSRHHAELRFEAGDWVLYDLGSSNGTFV 165
Query: 136 DEKRLRSGVVAVASPGSRITFG 157
+++R+ G V A G R+ FG
Sbjct: 166 NDRRVAGGTVVRA--GDRLRFG 185
>gi|159035721|ref|YP_001534974.1| FHA domain-containing protein [Salinispora arenicola CNS-205]
gi|157914556|gb|ABV95983.1| FHA domain containing protein [Salinispora arenicola CNS-205]
Length = 253
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ ST + G ++A + +P +S HAR+ G +++TDL STNGT ++ +R
Sbjct: 175 LQLGSTVIGRG---DQATLRLPDVGISRRHARLDFDGGQVVLTDLGSTNGTMVNGQR--- 228
Query: 143 GVVAVA-SPGSRITFGDTHLAMFRV 166
V AVA +PG I G T L FRV
Sbjct: 229 -VSAVALNPGDMIQLGTTTLT-FRV 251
>gi|431930904|ref|YP_007243950.1| multidrug ABC transporter ATPase [Thioflavicoccus mobilis 8321]
gi|431829207|gb|AGA90320.1| ABC-type multidrug transport system, ATPase component
[Thioflavicoccus mobilis 8321]
Length = 761
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+ VGRL D+ I +S HAR+ + D + + DL STNGT+++ +R+ S V+ A
Sbjct: 120 EMVVGRLAG-CDLPIDSPLISREHARLSLQPDGVYIEDLKSTNGTWVNGRRIDSRVLLQA 178
Query: 149 SPGSRITF 156
G R++F
Sbjct: 179 --GDRVSF 184
>gi|374370998|ref|ZP_09628986.1| FHA domain-containing protein [Cupriavidus basilensis OR16]
gi|373097444|gb|EHP38577.1| FHA domain-containing protein [Cupriavidus basilensis OR16]
Length = 843
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 83 FEIASTEVTVGRLPERADMVIP--VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
F I+ + T R E V P V VS HA I KG+ V DL STNGTF++ R+
Sbjct: 145 FLISKADETFSRYKE----VYPHQVNYVSRRHAHIFLKGNEPFVEDLGSTNGTFVNGMRV 200
Query: 141 RSGVVAVASPGSR--ITFGDTHLAMFRV 166
VA+ G R + FG H ++RV
Sbjct: 201 DEHAVAL---GERDLLAFGGNHF-VYRV 224
>gi|302036871|ref|YP_003797193.1| hypothetical protein NIDE1528 [Candidatus Nitrospira defluvii]
gi|190343285|gb|ACE75673.1| FHA domain containing protein [Candidatus Nitrospira defluvii]
gi|300604935|emb|CBK41268.1| conserved protein of unknown function, contains FHA domain
[Candidatus Nitrospira defluvii]
Length = 244
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E++ T T+GR + D+ + VS HARI + L + DL STNGTF++E+++
Sbjct: 23 LEVSRTPFTIGRKHDN-DLCLEDLAVSAHHARIVQVQQVLFLEDLTSTNGTFVNEQKI 79
>gi|375006719|ref|YP_004975503.1| Putative serine/threonine-protein kinase [Azospirillum lipoferum
4B]
gi|357427977|emb|CBS90927.1| Putative serine/threonine-protein kinase [Azospirillum lipoferum
4B]
Length = 567
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
VT+GR + +VI TVS HAR G+ L V DL++ NG +I V +
Sbjct: 52 VTLGRDNSLSSIVIDDDTVSRQHARFVVSGNELTVEDLNAVNGVYIQHHGFLEPFVPIVV 111
Query: 150 P-GSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSS 192
P G+ + FG+T L + + E +++ S D+ P+ +
Sbjct: 112 PHGTVLEFGETKLTV-------SYEEGTRSSNSGASRDALPIGT 148
>gi|310824436|ref|YP_003956794.1| adenylate and guanylate cyclase catalytic domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309397508|gb|ADO74967.1| Adenylate and Guanylate cyclase catalytic domain protein
[Stigmatella aurantiaca DW4/3-1]
Length = 529
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 12/72 (16%)
Query: 77 VPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF-- 134
+P+P+ T+GR E + V+ A++S HAR++++G+ +++ DL+S NGTF
Sbjct: 15 LPLPEG------PTTIGRTEENSLCVLH-ASLSRRHARVERQGEQVVLFDLNSKNGTFLG 67
Query: 135 ---IDEKRLRSG 143
++++ LR+G
Sbjct: 68 DTRVEQRELRAG 79
>gi|300857457|ref|YP_003782440.1| hypothetical protein cpfrc_00040 [Corynebacterium
pseudotuberculosis FRC41]
gi|375287623|ref|YP_005122164.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
3/99-5]
gi|383313232|ref|YP_005374087.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
P54B96]
gi|384503647|ref|YP_005680317.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
1002]
gi|384505738|ref|YP_005682407.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
C231]
gi|384507830|ref|YP_005684498.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
I19]
gi|384509926|ref|YP_005689504.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
PAT10]
gi|385806480|ref|YP_005842877.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
267]
gi|387135598|ref|YP_005691578.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
42/02-A]
gi|300684911|gb|ADK27833.1| putative secreted protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302205193|gb|ADL09535.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
C231]
gi|302329752|gb|ADL19946.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
1002]
gi|308275435|gb|ADO25334.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
I19]
gi|341823865|gb|AEK91386.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
PAT10]
gi|348606043|gb|AEP69316.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
42/02-A]
gi|371574912|gb|AEX38515.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
3/99-5]
gi|380868733|gb|AFF21207.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
P54B96]
gi|383803873|gb|AFH50952.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
267]
Length = 159
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+T+GR E V+ S HAR+ K+G+ V DLDS NGTF+ R+
Sbjct: 86 EITLGRAKE-CTFVVGDDYASARHARLIKRGNEWFVEDLDSRNGTFVGGYRI 136
>gi|384105862|ref|ZP_10006776.1| EmbR family transcriptional regulator [Rhodococcus imtechensis
RKJ300]
gi|383834780|gb|EID74212.1| EmbR family transcriptional regulator [Rhodococcus imtechensis
RKJ300]
Length = 377
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + S V +GR+P+ D+V+ VS HA I G + ++ DL S+NG ++ R+
Sbjct: 295 FRMGSAGVRIGRMPDN-DIVLAQGKVSRHHAIIVDTGMNFVLRDLRSSNGVYVGGNRVVD 353
Query: 143 GVVAVASPGSRITFGDTHL 161
V V G I GDT L
Sbjct: 354 SVWLV--DGDIIRIGDTEL 370
>gi|371781712|emb|CCD27746.1| predicted FHA domain-containing protein [Stigmatella aurantiaca Sg
a15]
Length = 175
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHA--RIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
S E+ +GRLP+ D+V+ +VS HA R ++TD+ S NGT I+ + +R
Sbjct: 83 SEELQIGRLPDN-DLVVDDPSVSKRHAVLRWDALARRCMLTDMGSRNGTLINAEYIRDA- 140
Query: 145 VAVASPGSRITFGDTHLAMF 164
A+ S G ++FGD
Sbjct: 141 NALVSDGDMLSFGDAEFCFL 160
>gi|149175382|ref|ZP_01854003.1| hypothetical protein PM8797T_17999 [Planctomyces maris DSM 8797]
gi|148845650|gb|EDL59992.1| hypothetical protein PM8797T_17999 [Planctomyces maris DSM 8797]
Length = 563
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTNGTFIDEKRLR 141
EI +VT+GR PE ++ + TVS HARI D + DL S NGTFI++ ++
Sbjct: 16 LEIKGKQVTLGRHPE-CEVCLKSNTVSRYHARITATAEDEYQIEDLGSGNGTFINDVPVK 74
Query: 142 SGVVAVASPGSRITFG 157
V V G +I+ G
Sbjct: 75 DPV--VLQSGDQISIG 88
>gi|160878201|ref|YP_001557169.1| FHA domain-containing protein [Clostridium phytofermentans ISDg]
gi|160426867|gb|ABX40430.1| FHA domain containing protein [Clostridium phytofermentans ISDg]
Length = 580
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D EI +G + VS HA+++K ++TDLDSTNGTF++ ++L
Sbjct: 493 DTIEIKEYPFYIGTAKNNLGYSLINTAVSRYHAKLEKDESRFILTDLDSTNGTFVNGRKL 552
Query: 141 RSGVVAVASPGSRITFGD 158
G ++F +
Sbjct: 553 MPNENFEIKQGDTVSFAN 570
>gi|134299565|ref|YP_001113061.1| FHA domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052265|gb|ABO50236.1| FHA domain containing protein [Desulfotomaculum reducens MI-1]
Length = 268
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF---- 134
M F + ++GR + D+V+ +++S HA+I+KK + ++DL+STNGT+
Sbjct: 185 MGKEFPLGDYRSSIGR-RDTCDIVLNDSSISRRHAQIEKKNNRFCLSDLNSTNGTYVNGI 243
Query: 135 -IDEKRLRSGVVAVASPGSRITFGDTHLAM 163
ID L +G V IT G+T L
Sbjct: 244 PIDRTELTTGDV--------ITLGNTVLVF 265
>gi|88811166|ref|ZP_01126422.1| hypothetical protein NB231_10198 [Nitrococcus mobilis Nb-231]
gi|88791705|gb|EAR22816.1| hypothetical protein NB231_10198 [Nitrococcus mobilis Nb-231]
Length = 803
Score = 42.7 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 34/116 (29%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG------------------------ 143
+S HA I ++ D L V DL STNGTF+D +RL +G
Sbjct: 159 ISRRHALIFRQQDGLYVEDLGSTNGTFLDGRRLVTGARLEDRANIAFGGKFFSYRMELGP 218
Query: 144 VVAVA---SPGS-RITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSSAKS 195
VVA A PG+ +T D+ L F V+AP+ T+E+ D+P L+ AK+
Sbjct: 219 VVAEAFSQEPGTIFVTAADSFLDAF----CPEVDAPADTDEAS--ADNPALAKAKA 268
>gi|403737965|ref|ZP_10950693.1| hypothetical protein AUCHE_05_03750 [Austwickia chelonae NBRC
105200]
gi|403192077|dbj|GAB77463.1| hypothetical protein AUCHE_05_03750 [Austwickia chelonae NBRC
105200]
Length = 150
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
F + + TVGR P+ +D+ + TVS HA +++GD+ +V D+ S NGT+++ +R+
Sbjct: 66 FLLDAPLTTVGRHPD-SDIFLDDVTVSRKHALFEQEGDAFVVRDVGSLNGTYVNRQRI 122
>gi|56476344|ref|YP_157933.1| hypothetical protein ebA1675 [Aromatoleum aromaticum EbN1]
gi|56312387|emb|CAI07032.1| hypothetical protein ebA1675 [Aromatoleum aromaticum EbN1]
Length = 811
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG + + DL STNGTF+ RL V + G + FG +H ++
Sbjct: 155 VNYISRRHAHIFLKGGAPFIEDLGSTNGTFVGGTRLDEHAVEL-HDGDIVAFGGSHF-VY 212
Query: 165 RVSKIDTVEAPSKTEESEEKGDSPPLSSAK 194
RVS E + E G +PP+++A+
Sbjct: 213 RVSLQHEAEVEA---EPTLTGFTPPVAAAE 239
>gi|227875398|ref|ZP_03993539.1| FHA domain protein [Mobiluncus mulieris ATCC 35243]
gi|269977348|ref|ZP_06184321.1| oxoglutarate dehydrogenase inhibitor [Mobiluncus mulieris 28-1]
gi|306818711|ref|ZP_07452433.1| oxoglutarate dehydrogenase inhibitor [Mobiluncus mulieris ATCC
35239]
gi|307701107|ref|ZP_07638132.1| putative oxoglutarate dehydrogenase inhibitor [Mobiluncus mulieris
FB024-16]
gi|227843952|gb|EEJ54120.1| FHA domain protein [Mobiluncus mulieris ATCC 35243]
gi|269934651|gb|EEZ91212.1| oxoglutarate dehydrogenase inhibitor [Mobiluncus mulieris 28-1]
gi|304648397|gb|EFM45700.1| oxoglutarate dehydrogenase inhibitor [Mobiluncus mulieris ATCC
35239]
gi|307614102|gb|EFN93346.1| putative oxoglutarate dehydrogenase inhibitor [Mobiluncus mulieris
FB024-16]
Length = 145
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + + +T GR P R+D+ + TVS H + LV D+ S NGT++D R+ S
Sbjct: 63 FLLDTDRITAGRHP-RSDIFLDDVTVSRKHCEFLRGDGGYLVRDIGSLNGTYVDRIRVES 121
Query: 143 GVVAVASPGSRITFGDTHLAMF 164
++A G + G LA +
Sbjct: 122 HLLAA---GEEVQIGKFRLAYY 140
>gi|453362579|dbj|GAC81503.1| hypothetical protein GM1_036_00030 [Gordonia malaquae NBRC 108250]
Length = 154
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 82 AFEIASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
A +A+T +T+G P RAD +V+ S HARI +GD V DL STNGT++
Sbjct: 67 AGALANTRITLGAQPVLIGRADDSTLVLTDDYASERHARISPRGDDWYVEDLGSTNGTYL 126
Query: 136 DEKRLRSGVVA 146
D ++ + V A
Sbjct: 127 DRSKVTTAVRA 137
>gi|427730292|ref|YP_007076529.1| family 3 adenylate cyclase [Nostoc sp. PCC 7524]
gi|427366211|gb|AFY48932.1| family 3 adenylate cyclase [Nostoc sp. PCC 7524]
Length = 546
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTNGTFIDE 137
T+GRLPE ++ +P VS HA+I KK DS ++ DL S NGT +++
Sbjct: 25 TIGRLPE-CNLYLPFGGVSRKHAQIVKKAHDSWIIEDLGSKNGTQVNQ 71
>gi|218132574|ref|ZP_03461378.1| hypothetical protein BACPEC_00433 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992300|gb|EEC58303.1| FHA domain protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 452
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+GR AD+ I A VS +HA+I + + ++V DL S NGT+++ +RL +
Sbjct: 373 CVIGRHGMEADVFIDDAYVSRMHAQISIENEEVVVKDLYSGNGTYVNGRRLIPNEPERLN 432
Query: 150 PGSRITFGDTHLAMFRV 166
G ITF +++RV
Sbjct: 433 NGDVITFA---ASLYRV 446
>gi|56384438|gb|AAV85824.1| zeaxanthin epoxidase [Eutrema halophilum]
Length = 666
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 101 MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSR-----IT 155
+VIP VS +HAR+ K + + DL S +GT++ + R V P I
Sbjct: 572 IVIPAPQVSKMHARVTYKDGAFFLMDLRSEHGTYVTDNEGRRYRVTPNFPARFRSSDIIE 631
Query: 156 FGDTHLAMFRVSKIDTV-EAPSKTEESEEK 184
FG A FRV I T ++ SK +ES K
Sbjct: 632 FGSDKKAAFRVKVIRTTPKSTSKNKESNGK 661
>gi|427739474|ref|YP_007059018.1| FHA domain-containing protein [Rivularia sp. PCC 7116]
gi|427374515|gb|AFY58471.1| FHA domain-containing protein [Rivularia sp. PCC 7116]
Length = 341
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+++ L G PG R++ G L F
Sbjct: 280 VSRIHADIRVEGDAYYIEDVGSSNGTYVNGMSLLPGNRHRLRPGDRVSMGKGDLVSF 336
>gi|383810006|ref|ZP_09965517.1| FtsK/SpoIIIE family protein [Rothia aeria F0474]
gi|383447194|gb|EID50180.1| FtsK/SpoIIIE family protein [Rothia aeria F0474]
Length = 1444
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
+ VGR P+ AD+V+P + S H RI++ + + +TD STNGTF++
Sbjct: 103 LIVGRSPQ-ADIVLPTESASWEHCRIERTEEGVKITDAGSTNGTFVN 148
>gi|376260844|ref|YP_005147564.1| FHA domain-containing protein [Clostridium sp. BNL1100]
gi|373944838|gb|AEY65759.1| FHA domain-containing protein [Clostridium sp. BNL1100]
Length = 462
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D ++ + VGR+ D +I V +HA I + DS + D S NGT++++ R+
Sbjct: 376 DIIKVDKNSILVGRMGSFVDHIIDNNAVGKVHAEILNEEDSYFIMDCSSRNGTYLNDDRI 435
Query: 141 RSGVVAVASPGSRITFGDTHLAMF 164
+ P ++I + + F
Sbjct: 436 K--------PNTKIKVNNNDIIRF 451
>gi|386739391|ref|YP_006212571.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
31]
gi|387137653|ref|YP_005693632.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
CIP 52.97]
gi|387139707|ref|YP_005695685.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
1/06-A]
gi|389849401|ref|YP_006351636.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
258]
gi|392399621|ref|YP_006436221.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
Cp162]
gi|349734131|gb|AEQ05609.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
CIP 52.97]
gi|355391498|gb|AER68163.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
1/06-A]
gi|384476085|gb|AFH89881.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
31]
gi|388246707|gb|AFK15698.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
258]
gi|390530699|gb|AFM06428.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
Cp162]
Length = 159
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+T+GR E V+ S HAR+ K+G+ V DLDS NGTF+ R+
Sbjct: 86 EITLGRAKE-CTFVVGDDYASARHARLIKRGNEWFVEDLDSRNGTFVGGYRI 136
>gi|148655915|ref|YP_001276120.1| FHA domain-containing protein [Roseiflexus sp. RS-1]
gi|148568025|gb|ABQ90170.1| FHA domain containing protein [Roseiflexus sp. RS-1]
Length = 154
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+GR E ++ + + +S HAR++ +G+ ++ DL+STNGTF+++ +R V
Sbjct: 82 IGRSMEHCEIALNDSFLSQQHARLELRGNQWVLEDLNSTNGTFVNDIEVRDATV 135
>gi|75910414|ref|YP_324710.1| FHA domain-containing protein [Anabaena variabilis ATCC 29413]
gi|75704139|gb|ABA23815.1| FHA domain containing protein [Anabaena variabilis ATCC 29413]
Length = 287
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 226 VSRVHADIRLEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 282
>gi|411118903|ref|ZP_11391283.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410710766|gb|EKQ68273.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 327
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRSG 143
S T+GR E + V+P +S HA +Q + G+ L+ DL S NG+F++++R+
Sbjct: 25 GSNCWTIGR-SEDNNFVLPDRWISRNHAMLQFMENGEFYLI-DLGSRNGSFVNDRRV--S 80
Query: 144 VVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
+ + G R+TFG T L + AP ++ EK
Sbjct: 81 IPVTLNNGDRLTFGQTELEFY-------CPAPKPHDDDPEK 114
>gi|289706955|ref|ZP_06503290.1| FHA domain protein [Micrococcus luteus SK58]
gi|289556280|gb|EFD49636.1| FHA domain protein [Micrococcus luteus SK58]
Length = 311
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 94 RLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSR 153
R ERAD+VIP ++VS H R+ G ++ + DL S NG ++ +R+ V G
Sbjct: 236 RSAERADLVIPDSSVSREHLRLLTVGSTVTLLDLGSRNGVLVNGRRVDGSV--TLRDGDV 293
Query: 154 ITFGDTHLAMF 164
+T G T L F
Sbjct: 294 VTVGQTELLFF 304
>gi|210631128|ref|ZP_03296763.1| hypothetical protein COLSTE_00648 [Collinsella stercoris DSM 13279]
gi|210160160|gb|EEA91131.1| type VII secretion protein EssC [Collinsella stercoris DSM 13279]
Length = 1436
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK--------RLR 141
+GR P+ A++ VSG HAR+ +GD+ V DL STNGT ++ + RLR
Sbjct: 27 CVIGRSPD-AEIRYEAPEVSGGHARLTLRGDAFTVEDLGSTNGTLVNGRALPARTPLRLR 85
Query: 142 SG-VVAVAS 149
+G VV +A+
Sbjct: 86 AGDVVQIAA 94
>gi|427713363|ref|YP_007061987.1| multidrug ABC transporter ATPase [Synechococcus sp. PCC 6312]
gi|427377492|gb|AFY61444.1| ABC-type multidrug transport system, ATPase component
[Synechococcus sp. PCC 6312]
Length = 1030
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
D+VI +VS HA+I ++ SL++TDL+S NGTF++ K
Sbjct: 275 DLVIEHPSVSRFHAKIDRQQGSLVLTDLESCNGTFVNGK 313
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 80 PD-AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
PD F IA +T+GR PE +V+ +VS HARI + +TDL ST+GT I+ +
Sbjct: 15 PDYGFPIAQDTLTIGRTPENT-IVLADRSVSRQHARIVCSNEGFSITDLGSTSGTRINYR 73
Query: 139 RLRSGVVAVASPGSRITFGDTHL 161
L + G I GD+ L
Sbjct: 74 PLSPHTSESLNDGDLIQIGDSVL 96
>gi|409990568|ref|ZP_11273924.1| FHA domain-containing protein, partial [Arthrospira platensis str.
Paraca]
gi|409938560|gb|EKN79868.1| FHA domain-containing protein, partial [Arthrospira platensis str.
Paraca]
Length = 92
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 100 DMVIPVATVSGL---------HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
D+V P VSG HA I+ +GD+ + D+ S+NGT+I+ L G P
Sbjct: 14 DLVPPDIDVSGFANAEIVSRTHANIRPEGDAYYIEDVGSSNGTYINNIPLPKGNRHRLRP 73
Query: 151 GSRITFGDTHLAMF 164
G RI G + F
Sbjct: 74 GDRIALGKGDMVSF 87
>gi|148655958|ref|YP_001276163.1| FHA domain-containing protein [Roseiflexus sp. RS-1]
gi|148568068|gb|ABQ90213.1| FHA domain containing protein [Roseiflexus sp. RS-1]
Length = 863
Score = 42.7 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + +T+GR + A +VI S HA I+++G + ++ DL S NGT ++ +R++
Sbjct: 17 FALGDQPLTIGRAADNA-VVIASPRASRHHAHIRREGAAFVIYDLGSANGTLVNGQRVQR 75
Query: 143 GVVAVASPGSRITFGD 158
AV PG I GD
Sbjct: 76 ---AVLQPGDLIDIGD 88
>gi|442322048|ref|YP_007362069.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441489690|gb|AGC46385.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 580
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI------D 136
F++ E +GR + + IP +VS H ++K G V+DL S NGT + D
Sbjct: 57 FQLEDGEYVIGRATDNP-ICIPDTSVSRKHVMVRKSGGGWTVSDLGSGNGTLVNGDAIGD 115
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMFRVSK-IDTVEAPSKT 178
E L +G V IT GDT L V+ + V AP+++
Sbjct: 116 ETPLANGDV--------ITLGDTELRFEDVANSTNVVSAPARS 150
>gi|260439385|ref|ZP_05793201.1| FHA-domain-containing protein [Butyrivibrio crossotus DSM 2876]
gi|292808181|gb|EFF67386.1| FHA-domain-containing protein [Butyrivibrio crossotus DSM 2876]
Length = 407
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+G E+AD V+ +S +HA+I K+ + DL+STNGT ++ + L + + S
Sbjct: 335 IGSSAEKADCVVEGNGISRIHAKIIKEDSVYYIKDLNSTNGTRVNGELLATYRLMPLSVN 394
Query: 152 SRITFGDTHL 161
RIT G+ L
Sbjct: 395 DRITVGNIDL 404
>gi|115379234|ref|ZP_01466350.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310822225|ref|YP_003954583.1| FHA domain/tetratricopeptide repeat protein [Stigmatella aurantiaca
DW4/3-1]
gi|115363766|gb|EAU62885.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309395297|gb|ADO72756.1| FHA domain/tetratricopeptide repeat protein [Stigmatella aurantiaca
DW4/3-1]
Length = 746
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S+E+ +GR E D+ + VS HAR+ + +LV DL+S+NGT++D R+
Sbjct: 19 SSELKIGRH-ESNDLPLTEGGVSRQHARVFVENGDVLVEDLNSSNGTYVDAGRVSDPT-- 75
Query: 147 VASPGSRITFGDTHLAM 163
+P S++ GD L +
Sbjct: 76 PLTPQSQVVIGDYELRL 92
>gi|331003053|ref|ZP_08326565.1| hypothetical protein HMPREF0491_01427 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413097|gb|EGG92472.1| hypothetical protein HMPREF0491_01427 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 378
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
EI +G+ D V+ VS LH + +K ++L V DL+S NGT+I+ K+L +
Sbjct: 297 EIGYLPFIIGKQDRICDYVLDAEGVSRLHLQFFEKENTLYVRDLNSRNGTYINGKKLENE 356
Query: 144 VVAVASPGSRIT 155
+ G I
Sbjct: 357 ENMEMNNGDNIN 368
>gi|345872513|ref|ZP_08824446.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Thiorhodococcus drewsii AZ1]
gi|343918761|gb|EGV29523.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Thiorhodococcus drewsii AZ1]
Length = 761
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
E S + VGR+P + I VS HAR+ + D + V DL S NGT+++ R+++
Sbjct: 114 EDQSGSIIVGRVPG-CGLPILSPLVSREHARLSLRPDGVFVEDLRSVNGTWVNGARIKT- 171
Query: 144 VVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSK 177
+ +PG R+ F + + +F S ++ V+A ++
Sbjct: 172 -LTQLTPGDRVAFA-SFVFVFTGSALEPVDASNR 203
>gi|17229095|ref|NP_485643.1| hypothetical protein alr1603 [Nostoc sp. PCC 7120]
gi|1169734|sp|P46017.1|FRAH_NOSS1 RecName: Full=Protein FraH
gi|556608|gb|AAA50356.1| putative heterocyst to vegetative cell connection protein [Nostoc
sp. PCC 7120]
gi|17135423|dbj|BAB77969.1| alr1603 [Nostoc sp. PCC 7120]
Length = 289
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 228 VSRVHADIRLEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 284
>gi|150019670|ref|YP_001311924.1| FHA domain-containing protein [Clostridium beijerinckii NCIMB 8052]
gi|149906135|gb|ABR36968.1| FHA domain containing protein [Clostridium beijerinckii NCIMB 8052]
Length = 147
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++T+GR + + +V+ VSG HARI + SL + DL+STNGT++++ ++
Sbjct: 73 SDLTIGRKDDNS-IVLCDQHVSGSHARIIIRNSSLFIEDLNSTNGTYLNKNKI 124
>gi|326205019|ref|ZP_08194869.1| Forkhead-associated protein [Clostridium papyrosolvens DSM 2782]
gi|325984824|gb|EGD45670.1| Forkhead-associated protein [Clostridium papyrosolvens DSM 2782]
Length = 449
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D ++ + VGR+ D +I V +HA I + DS + D S NGT++++ R+
Sbjct: 363 DIIKVDKNSILVGRMGSFVDHIIDNNAVGKVHAEILHEDDSYFIMDCSSRNGTYLNDDRI 422
Query: 141 RSGVVAVASPGSRITFGDTHLAM 163
+ + I F +
Sbjct: 423 KPNTKVKVNNNDVIRFANKEFTF 445
>gi|168335250|ref|ZP_02693352.1| hypothetical protein Epulo_09398 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 411
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 93 GRLPERADMVIPVA--TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
G P+ +D V+ ++S HA I ++ D + D +S+NGTF++++RL+ + +
Sbjct: 323 GNKPKESDYEFDVSIKSISRKHATIVRENDVYYLVDFNSSNGTFLNDERLKRNIQYQLNY 382
Query: 151 GSRITF 156
+I+F
Sbjct: 383 NDKISF 388
>gi|162450519|ref|YP_001612886.1| sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
gi|161161101|emb|CAN92406.1| Sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
Length = 426
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 78 PMPDAFEIASTEVTVGR--LPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
P P AF + + +GR L ER + A VSG H RI + G +L V D+ S NGT++
Sbjct: 31 PRPMAFALPDSGTVIGRAWLAERG---LADAEVSGKHLRIDRAGGALRVADVGSRNGTWV 87
Query: 136 DEKRL 140
+ RL
Sbjct: 88 NGSRL 92
>gi|220910510|ref|YP_002485821.1| FHA domain-containing protein [Cyanothece sp. PCC 7425]
gi|219867121|gb|ACL47460.1| FHA domain containing protein [Cyanothece sp. PCC 7425]
Length = 320
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 74 GFKVPMP------DAFE-----IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSL 122
F P+P D FE + E +GR E + +VIP +S HA ++ L
Sbjct: 42 AFVAPVPRLLIRSDYFERSLSLVHRKEWVIGRGKE-STIVIPDRRISRRHAIVEAIAPGL 100
Query: 123 L-VTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
+ DLDS NG+F++++R+ V + G RI FG T +
Sbjct: 101 FSLIDLDSLNGSFVNQQRVTKPV--ILQNGDRILFGQTEV 138
>gi|427715561|ref|YP_007063555.1| FHA domain-containing protein [Calothrix sp. PCC 7507]
gi|427347997|gb|AFY30721.1| FHA domain containing protein [Calothrix sp. PCC 7507]
Length = 293
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G + F
Sbjct: 232 VSRIHADIRVEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDMVTF 288
>gi|408794729|ref|ZP_11206334.1| FHA domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461964|gb|EKJ85694.1| FHA domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 490
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D F++ EVT+G E +VI TV+GLHA+I+ K ++ D S G +++ K+L
Sbjct: 408 DPFQLQFDEVTIGSW-ESNHLVISDPTVAGLHAKIKNKKGKYILFDCVSETGVYLNGKKL 466
>gi|389720834|ref|ZP_10187642.1| hypothetical protein HADU_12024 [Acinetobacter sp. HA]
gi|388609300|gb|EIM38483.1| hypothetical protein HADU_12024 [Acinetobacter sp. HA]
Length = 217
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++ VGR + AD+V+ A +S HA K D+L V DL S+NGTF+++ R+ S A+
Sbjct: 22 DMLVGR-HQAADIVLQAAEISRKHAAFLLKEDALWVQDLGSSNGTFVNDMRIDSE--ALL 78
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVE 173
G + F ++ ++ VE
Sbjct: 79 KQGDIVQFASLKFSVLEPAQEVIVE 103
>gi|412994022|emb|CCO14533.1| predicted protein [Bathycoccus prasinos]
Length = 709
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDS--LLVTDLDSTNGTFIDEKRLRSGVVAV 147
VT GR P D+VI + S LH +Q K ++ + + D ST+G F+++++L+ G+ A
Sbjct: 61 VTFGRHP-LCDVVIEHPSSSRLHCVLQFKKNTKEMYLFDPGSTHGVFVNKRKLKKGIHAP 119
Query: 148 ASPGSRITFGDT 159
G +I FG++
Sbjct: 120 IFVGDQIKFGES 131
>gi|379711404|ref|YP_005266609.1| transcriptional regulator [Nocardia cyriacigeorgica GUH-2]
gi|374848903|emb|CCF65979.1| transcriptional regulator [Nocardia cyriacigeorgica GUH-2]
Length = 372
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 76 KVPMPD--AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
++ MPD A +A + +GR+ + D+VI S HA+I LL+ DL S NG
Sbjct: 282 QILMPDGRAVVVAQAGLRIGRMTDN-DLVIDDPKASRYHAQILPSRAGLLIKDLHSANGV 340
Query: 134 FIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSK 168
F++E + +G A+ + G I G T L +F+ ++
Sbjct: 341 FVNELPIETG--ALLADGDAIRIGGTVL-VFQAAR 372
>gi|168704347|ref|ZP_02736624.1| hypothetical protein GobsU_32724 [Gemmata obscuriglobus UQM 2246]
Length = 594
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ +GR + +VIP VS HA+I + G + DL S N TF++ K + G
Sbjct: 28 IVIGRDEKECQVVIPHHAVSRRHAQIVRAGGQFYIEDLKSRNRTFVNSKEVPPGGRQALK 87
Query: 150 PGSRITFGD 158
P RI D
Sbjct: 88 PDDRIKICD 96
>gi|405373478|ref|ZP_11028251.1| hypothetical protein A176_4812 [Chondromyces apiculatus DSM 436]
gi|397087737|gb|EJJ18767.1| hypothetical protein A176_4812 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 467
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D+ + ++S HA + ++GD + DL S NGTF++ R+ S V + PG I+ G+
Sbjct: 15 DLRLQHPSISRRHAHLTRRGDRFFLKDLSSQNGTFLNRHRIASEVELM--PGDEISLGNA 72
Query: 160 HLAM 163
L +
Sbjct: 73 LLRL 76
>gi|257059783|ref|YP_003137671.1| FHA modulated glycosyl transferase/transpeptidase [Cyanothece sp.
PCC 8802]
gi|256589949|gb|ACV00836.1| FHA modulated glycosyl transferase/transpeptidase [Cyanothece sp.
PCC 8802]
Length = 751
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHA---R 114
E W+ GDGD P + + +GR D+VIP VS +H R
Sbjct: 42 ELWV--EAGDGDR---------PQVYSLIGDRYILGRSSRSCDIVIPNGVVSQVHCSLHR 90
Query: 115 IQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEA 174
+K ++ D STNG + + +RL+S + G IT G LA + +KI
Sbjct: 91 DKKNPHHFILEDEHSTNGIYCNRRRLKSLTL---RHGDVITLGPPELA--KTAKITYHNP 145
Query: 175 PS 176
P+
Sbjct: 146 PA 147
>gi|427727739|ref|YP_007073976.1| FHA domain-containing protein [Nostoc sp. PCC 7524]
gi|427363658|gb|AFY46379.1| FHA domain-containing protein [Nostoc sp. PCC 7524]
Length = 303
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 242 VSRVHADIRVEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 298
>gi|262196854|ref|YP_003268063.1| Fis family transcriptional regulator [Haliangium ochraceum DSM
14365]
gi|262080201|gb|ACY16170.1| sigma54 specific transcriptional regulator, Fis family [Haliangium
ochraceum DSM 14365]
Length = 451
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 97 ERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF 156
E D+ + T+S H I + ++ DLDSTNGTF+D +R + V +RI
Sbjct: 53 ESCDLALSDRTISRQHCEIALSREGYIIRDLDSTNGTFLDRGNVRIREIVVDGE-TRIRL 111
Query: 157 GDTHLAMFRVSKID-TVEAP 175
GDT + R+ +D TV+ P
Sbjct: 112 GDTSV---RIQPLDETVDIP 128
>gi|451942768|ref|YP_007463404.1| hypothetical protein A605_00120 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451902155|gb|AGF71042.1| hypothetical protein A605_00120 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 164
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+ +GR P+ D V+ S HAR+ ++G V DLDS NGTF+ R+
Sbjct: 91 EIVLGRSPD-CDFVLGDDYASARHARLFRRGSDWFVEDLDSRNGTFVGGYRI 141
>gi|435853627|ref|YP_007314946.1| FHA domain-containing protein [Halobacteroides halobius DSM 5150]
gi|433670038|gb|AGB40853.1| FHA domain-containing protein [Halobacteroides halobius DSM 5150]
Length = 249
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT-----FID 136
+F + S E +GR ++VI +VS +HA+I K LV DL+STNG FI
Sbjct: 166 SFVLDSVETNIGRQLS-NEIVISDRSVSRVHAQIIDKKYYYLVRDLNSTNGVLVNDEFIT 224
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMFRVSKID 170
EK+L + G +I G+ L F SK+D
Sbjct: 225 EKQL--------TDGDKIKLGEAILE-FCCSKVD 249
>gi|379714324|ref|YP_005302661.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
316]
gi|377653030|gb|AFB71379.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
316]
Length = 154
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+T+GR E V+ S HAR+ K+G+ V DLDS NGTF+ R+
Sbjct: 86 EITLGRAKE-CTFVVGDDYASARHARLIKRGNEWFVEDLDSRNGTFVGGYRI 136
>gi|338214578|ref|YP_004658641.1| forkhead-associated protein [Runella slithyformis DSM 19594]
gi|336308407|gb|AEI51509.1| Forkhead-associated protein [Runella slithyformis DSM 19594]
Length = 244
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 90 VTVGRLPERADMVIPVATVSGLHA---RIQKKGDSLLVTDLDSTNGTFIDEKR-LRSGVV 145
VTVGR P +V+P A VSG HA + ++ + D S NGTF+D +R LR V
Sbjct: 8 VTVGRKPGNT-IVLPNADVSGDHAILTLLDAPTNTWEIQDAGSRNGTFVDGQRILRKEV- 65
Query: 146 AVASPGSRITFGDTHL 161
+P +++TFG T L
Sbjct: 66 ---TPNNKVTFGSTPL 78
>gi|433649717|ref|YP_007294719.1| DNA-binding transcriptional activator of the SARP family
[Mycobacterium smegmatis JS623]
gi|433299494|gb|AGB25314.1| DNA-binding transcriptional activator of the SARP family
[Mycobacterium smegmatis JS623]
Length = 373
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 67 DGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTD 126
D +H + AF + + +GRL + D+V+ A VS HA I G S ++TD
Sbjct: 273 DMSHTHANLRSAAGHAFPLRAAATRIGRLTDN-DIVLDDANVSRHHAVIIDTGTSFVITD 331
Query: 127 LDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVS 167
L S NG + +R+R A + G RI D H F ++
Sbjct: 332 LRSANGVDVGGQRIRG--TATLADGDRIRICD-HEFTFEIA 369
>gi|330792792|ref|XP_003284471.1| hypothetical protein DICPUDRAFT_148227 [Dictyostelium purpureum]
gi|325085614|gb|EGC39018.1| hypothetical protein DICPUDRAFT_148227 [Dictyostelium purpureum]
Length = 574
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKK-GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
VGRLP D+ + T+S HA IQ K G L + DL ST+G+ I++++ + V
Sbjct: 109 VGRLP-VCDIPLEHPTISRQHAVIQHKPGGYLFLFDLASTHGSMINKQKCKPNVYIPIKS 167
Query: 151 GSRITFGDT 159
G I FG++
Sbjct: 168 GDVIKFGES 176
>gi|260221899|emb|CBA30924.1| hypothetical protein Csp_C25980 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 221
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+I T+GR P D+VI VSG HA I G + + DL+STNGT+++ K ++
Sbjct: 17 QITKDRTTLGRRPYN-DIVIDNLAVSGEHAVILMAGADIFLEDLNSTNGTYVNGKAVK 73
>gi|168181964|ref|ZP_02616628.1| FHA domain protein [Clostridium botulinum Bf]
gi|237796844|ref|YP_002864396.1| FHA domain-containing protein [Clostridium botulinum Ba4 str. 657]
gi|182674737|gb|EDT86698.1| FHA domain protein [Clostridium botulinum Bf]
gi|229263613|gb|ACQ54646.1| FHA domain protein [Clostridium botulinum Ba4 str. 657]
Length = 145
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+T+GR P+ +++ VSG HA+I K ++ DL+STNGT ++ K + S
Sbjct: 73 ITIGRKPDNI-LILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNNKNITGK--NQLS 129
Query: 150 PGSRITFGDTHLAMFRV 166
PG I G T +F+V
Sbjct: 130 PGDLIKIGGT---VFKV 143
>gi|148381326|ref|YP_001255867.1| FHA domain-containing protein [Clostridium botulinum A str. ATCC
3502]
gi|153933647|ref|YP_001385702.1| FHA domain-containing protein [Clostridium botulinum A str. ATCC
19397]
gi|153937307|ref|YP_001389108.1| FHA domain-containing protein [Clostridium botulinum A str. Hall]
gi|153940341|ref|YP_001392741.1| FHA domain-containing protein [Clostridium botulinum F str.
Langeland]
gi|168178933|ref|ZP_02613597.1| FHA domain protein [Clostridium botulinum NCTC 2916]
gi|170754919|ref|YP_001783022.1| FHA domain-containing protein [Clostridium botulinum B1 str. Okra]
gi|170758891|ref|YP_001788714.1| FHA domain-containing protein [Clostridium botulinum A3 str. Loch
Maree]
gi|226950835|ref|YP_002805926.1| FHA domain-containing protein [Clostridium botulinum A2 str. Kyoto]
gi|384463704|ref|YP_005676299.1| FHA domain-containing protein [Clostridium botulinum F str. 230613]
gi|387819664|ref|YP_005680011.1| fha-domain containing secreted protein [Clostridium botulinum
H04402 065]
gi|421836004|ref|ZP_16270605.1| fha-domain containing secreted protein [Clostridium botulinum
CFSAN001627]
gi|429245433|ref|ZP_19208819.1| fha-domain containing secreted protein [Clostridium botulinum
CFSAN001628]
gi|148290810|emb|CAL84944.1| putative phosphopeptide-binding membrane protein [Clostridium
botulinum A str. ATCC 3502]
gi|152929691|gb|ABS35191.1| FHA domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152933221|gb|ABS38720.1| FHA domain protein [Clostridium botulinum A str. Hall]
gi|152936237|gb|ABS41735.1| FHA domain protein [Clostridium botulinum F str. Langeland]
gi|169120131|gb|ACA43967.1| FHA domain protein [Clostridium botulinum B1 str. Okra]
gi|169405880|gb|ACA54291.1| FHA domain protein [Clostridium botulinum A3 str. Loch Maree]
gi|182669993|gb|EDT81969.1| FHA domain protein [Clostridium botulinum NCTC 2916]
gi|226844127|gb|ACO86793.1| FHA domain protein [Clostridium botulinum A2 str. Kyoto]
gi|295320721|gb|ADG01099.1| FHA domain protein [Clostridium botulinum F str. 230613]
gi|322807708|emb|CBZ05283.1| fha-domain containing secreted protein [Clostridium botulinum
H04402 065]
gi|409742222|gb|EKN41715.1| fha-domain containing secreted protein [Clostridium botulinum
CFSAN001627]
gi|428757520|gb|EKX80006.1| fha-domain containing secreted protein [Clostridium botulinum
CFSAN001628]
Length = 145
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+T+GR P+ +++ VSG HA+I K ++ DL+STNGT ++ K + S
Sbjct: 73 ITIGRKPDNI-LILDDPYVSGHHAKIYSKNTQHIIEDLNSTNGTLLNNKNITGK--NQLS 129
Query: 150 PGSRITFGDTHLAMFRV 166
PG I G T +F+V
Sbjct: 130 PGDLIKIGGT---VFKV 143
>gi|58426608|gb|AAW75645.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 313
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 190 ADIVIDYPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 246
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 247 RHRFVVEVPR 256
>gi|90020764|ref|YP_526591.1| FHA domain-containing protein [Saccharophagus degradans 2-40]
gi|89950364|gb|ABD80379.1| Forkhead-associated [Saccharophagus degradans 2-40]
Length = 116
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI--QKKGD-----SLLVTDLDSTN 131
M FE+ EV +GR PE D+V+ + VS HA I +K D V DL STN
Sbjct: 12 MVHKFELRKEEVLLGRHPEN-DIVVDDSAVSSYHAAITLEKNKDFPEFLEFYVKDLGSTN 70
Query: 132 GTFIDE 137
GTFI++
Sbjct: 71 GTFIND 76
>gi|428305541|ref|YP_007142366.1| FHA domain-containing protein [Crinalium epipsammum PCC 9333]
gi|428247076|gb|AFZ12856.1| FHA domain containing protein [Crinalium epipsammum PCC 9333]
Length = 248
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S NGT+I+ L G PG RI+ G + F
Sbjct: 187 VSRIHADIRLEGDTYYLEDVGSANGTYINHTPLPRGNRHRLRPGDRISLGKGDMMTF 243
>gi|163845655|ref|YP_001633699.1| transcriptional regulator domain-containing protein [Chloroflexus
aurantiacus J-10-fl]
gi|222523360|ref|YP_002567830.1| putative winged helix family two component transcriptional
regulator [Chloroflexus sp. Y-400-fl]
gi|163666944|gb|ABY33310.1| transcriptional regulator domain protein [Chloroflexus aurantiacus
J-10-fl]
gi|222447239|gb|ACM51505.1| putative two component transcriptional regulator, winged helix
family [Chloroflexus sp. Y-400-fl]
Length = 219
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 67 DGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTD 126
+GD I + P+ +TVGR D++I S HAR ++ + + D
Sbjct: 15 NGDYREIVWDQPV----------ITVGR-DGANDIIIDHPLASRRHARFERTDEGFFIRD 63
Query: 127 LDSTNGTFIDEKRL 140
LDSTNGTF++++RL
Sbjct: 64 LDSTNGTFLNQERL 77
>gi|319764913|ref|YP_004128850.1| forkhead-associated protein [Alicycliphilus denitrificans BC]
gi|317119474|gb|ADV01963.1| Forkhead-associated protein [Alicycliphilus denitrificans BC]
Length = 208
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----EKRLRSG 143
TVGR P D+VI VSG HA GD + V DL STNGT+++ ++ LRSG
Sbjct: 24 TVGRRPYN-DVVIDNLAVSGEHAVFVMTGDDVQVYDLGSTNGTYVNGKAIKQQSLRSG 80
>gi|385653208|ref|ZP_10047761.1| transcriptional regulator [Leucobacter chromiiresistens JG 31]
Length = 154
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 43 DSSTTTTTTSTDVAA-ERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTV-GRLPERAD 100
D S T +TD+ ER ++ + G + + P A + +VTV GR P D
Sbjct: 24 DLSAIIRTRATDLTIDEREAVEALPSGAALLVVRRGPDQGARFLLDQDVTVAGRHPA-VD 82
Query: 101 MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTH 160
+ + TVS HA ++ G + V DL S NGTF D R+ V V + G+ + G
Sbjct: 83 IFLDDVTVSRRHAEFRRNGTAFSVADLGSLNGTFCDGTRIDGSV--VLADGAEVQVGKFR 140
Query: 161 LAMFRVSKIDTVE 173
F S+ D E
Sbjct: 141 FTFF-ASRFDLAE 152
>gi|222112551|ref|YP_002554815.1| fha domain-containing protein [Acidovorax ebreus TPSY]
gi|221731995|gb|ACM34815.1| FHA domain containing protein [Acidovorax ebreus TPSY]
Length = 211
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
TVGR P D+VI VSG HA GD + V DL STNGT+++ K ++
Sbjct: 24 TVGRRPYN-DVVIDNLAVSGEHAVFLMNGDDVEVEDLGSTNGTYVNGKAIK 73
>gi|88854519|ref|ZP_01129186.1| secreted protein [marine actinobacterium PHSC20C1]
gi|88816327|gb|EAR26182.1| secreted protein [marine actinobacterium PHSC20C1]
Length = 172
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
G ++ +P+ ++T+GR E + +VI S HAR+ + DS +V DLDSTNGT
Sbjct: 90 GLEISLPEE------QLTIGRSSE-SGLVIRDDYTSTHHARLLRWADSWVVQDLDSTNGT 142
Query: 134 FIDEKRL 140
F+ +R+
Sbjct: 143 FLAGQRV 149
>gi|383457379|ref|YP_005371368.1| Pkn9 associate protein 1 [Corallococcus coralloides DSM 2259]
gi|380733148|gb|AFE09150.1| Pkn9 associate protein 1 [Corallococcus coralloides DSM 2259]
Length = 496
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+T+GR +D+ + A++S HA++ ++G+ V DL S NGTF++ R++ G V +
Sbjct: 113 ITLGRS-STSDLRLQHASISRRHAQLTRRGNVFTVRDLGSQNGTFVNRLRIK-GEVEL-Q 169
Query: 150 PGSRITFGDTHLAM 163
PG ++ G+ L +
Sbjct: 170 PGDELSLGNATLRL 183
>gi|377574610|ref|ZP_09803632.1| hypothetical protein MOPEL_083_00020 [Mobilicoccus pelagius NBRC
104925]
gi|377536607|dbj|GAB48797.1| hypothetical protein MOPEL_083_00020 [Mobilicoccus pelagius NBRC
104925]
Length = 157
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
V +GR PE +VI SG HAR+ S V DL STNGTF+D +R+
Sbjct: 85 VLLGRNPE-CTLVIDDDYASGRHARVYADDASWYVEDLGSTNGTFVDGRRI 134
>gi|218780321|ref|YP_002431639.1| FHA domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
gi|218761705|gb|ACL04171.1| FHA domain containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 236
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+T+GRL + ++V+ VSG HA++ GD L+TDL S N TF++ + + S
Sbjct: 24 LTIGRLSDN-NVVVENLAVSGHHAKLDSVGDGYLLTDLQSKNHTFVNAQMITS 75
>gi|402829372|ref|ZP_10878248.1| oxoglutarate dehydrogenase inhibitor family protein [Slackia sp.
CM382]
gi|402284353|gb|EJU32856.1| oxoglutarate dehydrogenase inhibitor family protein [Slackia sp.
CM382]
Length = 149
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ F +A+ +T+GR P+ D+ + TVS HA I++ + DLDS NG +++ + +
Sbjct: 64 NVFRLAADVITIGRSPQ-CDIFLNDMTVSRSHAEIRRVNGVFHIVDLDSFNGLWVNNRNV 122
Query: 141 R 141
R
Sbjct: 123 R 123
>gi|392426902|ref|YP_006467896.1| FHA domain-containing protein [Desulfosporosinus acidiphilus SJ4]
gi|391356865|gb|AFM42564.1| FHA domain-containing protein [Desulfosporosinus acidiphilus SJ4]
Length = 266
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+F++ +V +GR + D+V+ VS H +I + + DL STNG+F++ +R+
Sbjct: 183 SFKLGDHDVFIGRHGQ-CDIVLHDPEVSRRHLKITPGQNGWWLDDLGSTNGSFVNGQRIT 241
Query: 142 SGVVAVASPGSRITFGDTHLAMFRV 166
VA PG RI G + L + +V
Sbjct: 242 HQTVA---PGDRIQMGLSLLVIQKV 263
>gi|162453453|ref|YP_001615820.1| sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
gi|161164035|emb|CAN95340.1| Sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
Length = 732
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
V +GR P + + I ++S HAR + GD +++ DL STNGT++ +R+ G V
Sbjct: 168 VVIGRAPP-SQVQIGDVSLSREHARFTQSGDKVVIEDLRSTNGTWLGGERITRGEV---K 223
Query: 150 PGSRITFGDTHLAM 163
PG + G +A+
Sbjct: 224 PGEEVILGKVVVAV 237
>gi|449137473|ref|ZP_21772799.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
europaea 6C]
gi|448883925|gb|EMB14432.1| protein serine phosphatase with GAF(s) sensor(s) [Rhodopirellula
europaea 6C]
Length = 593
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P+ D+V+ VS HA+I KKG+ V D S NGTF++ + L V S G
Sbjct: 1 MGRHPD-CDIVVDAGAVSRYHAKITKKGNEFAVEDAGSRNGTFVNGQLLSRP--HVLSEG 57
Query: 152 SRI 154
RI
Sbjct: 58 DRI 60
>gi|220929877|ref|YP_002506786.1| FHA domain-containing protein [Clostridium cellulolyticum H10]
gi|220000205|gb|ACL76806.1| FHA domain containing protein [Clostridium cellulolyticum H10]
Length = 142
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
+++T+GR + MV+ VS HA+I + ++ DLDSTNGTF++ R+ +
Sbjct: 67 SKLTIGR-NKNNQMVLASRAVSNYHAKIYFEDSRYMIEDLDSTNGTFVNGNRVDKKSL-- 123
Query: 148 ASPGSRITFGDT 159
PG I +T
Sbjct: 124 -QPGDEIRISET 134
>gi|428304418|ref|YP_007141243.1| forkhead-associated protein [Crinalium epipsammum PCC 9333]
gi|428245953|gb|AFZ11733.1| Forkhead-associated protein [Crinalium epipsammum PCC 9333]
Length = 181
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P R D+++ TVSGLH I + + + +L STN +D K + +G V++
Sbjct: 31 VRIGRDPARCDIILTDPTVSGLHIEIFFNSQQQNFYLRNLRSTNPAVVDGKVIVTGEVSL 90
Query: 148 ASPGSRITFGDTHLAMFRVSKID 170
GS I G L + ++ D
Sbjct: 91 RQ-GSTIYLGQIALFITAINSAD 112
>gi|390569342|ref|ZP_10249630.1| FHA domain-containing protein [Burkholderia terrae BS001]
gi|389939055|gb|EIN00896.1| FHA domain-containing protein [Burkholderia terrae BS001]
Length = 867
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
V +S HA I KG + DL STNGTF++ KRL VA+ + G + FG H
Sbjct: 177 VNYISRRHAHIFMKGGEPWIEDLGSTNGTFLNLKRLGESAVALQN-GDIVGFGGDHF 232
>gi|377572149|ref|ZP_09801246.1| hypothetical protein GOTRE_152_00050 [Gordonia terrae NBRC 100016]
gi|377530645|dbj|GAB46411.1| hypothetical protein GOTRE_152_00050 [Gordonia terrae NBRC 100016]
Length = 154
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +++G+ P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRISLGQQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RLRSGV 144
++ + V
Sbjct: 130 KVTTAV 135
>gi|262197882|ref|YP_003269091.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262081229|gb|ACY17198.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 173
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 16/141 (11%)
Query: 34 LGAIRASEADSS-TTTTTTSTDVAAERWLLQPVGD--GDTSHIGFKVPMPDAFEIASTEV 90
+GA+ A D+ + T T ++ERW Q + + HI P V
Sbjct: 34 IGAMPAMAHDAGDSVTMFTQAGWSSERWASQYAREYGNNVCHI-LNTLRP---------V 83
Query: 91 TVGRLPERADMVIPVATVSGLHARIQ-KKGDS-LLVTDLDSTNGTFIDEKRLRSGVVAVA 148
T+GR + I +VS LHAR+ +GD V D DS NGTF++ +RL G
Sbjct: 84 TIGR-SRSCSLRILDGSVSSLHARLYFDRGDCEYYVVDEDSRNGTFLNGERLTPGENTRL 142
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G+ + FG T S +
Sbjct: 143 YSGAMLWFGKTAFVFLLSSTV 163
>gi|121606836|ref|YP_984165.1| FHA domain-containing protein [Polaromonas naphthalenivorans CJ2]
gi|120595805|gb|ABM39244.1| FHA domain containing protein [Polaromonas naphthalenivorans CJ2]
Length = 188
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
++GR P D+VI VSG HA +Q G+ + DL+STNGT+++ K ++
Sbjct: 24 SLGRRPYN-DIVIDNMAVSGEHAVLQMSGNEGYIEDLNSTNGTYVNGKTVK 73
>gi|50083569|ref|YP_045079.1| hypothetical protein ACIAD0295 [Acinetobacter sp. ADP1]
gi|49529545|emb|CAG67257.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 218
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
++ VGR + AD+++ A +S HA + + D L V DL+S+NGTF+++ R+ V
Sbjct: 23 DMLVGRH-QDADLLLQAAEISRKHAALLLQNDQLWVQDLNSSNGTFVNDIRIEQEV 77
>gi|420247831|ref|ZP_14751218.1| FHA domain-containing protein [Burkholderia sp. BT03]
gi|398070092|gb|EJL61410.1| FHA domain-containing protein [Burkholderia sp. BT03]
Length = 861
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 73 IGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNG 132
IGF F ++ T+ R +R V +S HA I KG + DL STNG
Sbjct: 153 IGFP------FLVSKTDELFSRYKDRYPH--QVNYISRRHAHIFMKGGEPWIEDLGSTNG 204
Query: 133 TFIDEKRLRSGVVAVASPGSRITFGDTHL 161
TF++ KRL VA+ + G + FG H
Sbjct: 205 TFLNLKRLGESAVALQN-GDIVGFGGDHF 232
>gi|154483645|ref|ZP_02026093.1| hypothetical protein EUBVEN_01349 [Eubacterium ventriosum ATCC
27560]
gi|149735555|gb|EDM51441.1| FHA domain protein [Eubacterium ventriosum ATCC 27560]
Length = 256
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F I + +GR E AD+ IP +S +H I K + D DSTNGT ++ +LR
Sbjct: 174 FVINKSPFVIGR--ENADITIPETYISKIHVIISYKDGKYRIADYDSTNGTKVNGTKLRP 231
Query: 143 GVVAVASPGSRITFGD 158
V G I +
Sbjct: 232 KVYYEIRDGYEIELSE 247
>gi|404212665|ref|YP_006666840.1| forkhead-associated protein [Gordonia sp. KTR9]
gi|403643464|gb|AFR46704.1| forkhead-associated protein [Gordonia sp. KTR9]
Length = 154
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +++G+ P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRISLGQQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RLRSGV 144
++ + V
Sbjct: 130 KVTTAV 135
>gi|377562572|ref|ZP_09791953.1| hypothetical protein GOOTI_266_00070 [Gordonia otitidis NBRC
100426]
gi|377520247|dbj|GAB37118.1| hypothetical protein GOOTI_266_00070 [Gordonia otitidis NBRC
100426]
Length = 154
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRITLGTQPVLIGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RLRSGV 144
++ + V
Sbjct: 130 KVTTAV 135
>gi|148655807|ref|YP_001276012.1| protein kinase [Roseiflexus sp. RS-1]
gi|148567917|gb|ABQ90062.1| protein kinase [Roseiflexus sp. RS-1]
Length = 1073
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+TVGR+ ER D+V+ VS H R++ G +L TDL S+NGT ++E+ L
Sbjct: 350 LTVGRV-ERNDVVLTGEGVSRHHLRLEWDGIQVLATDLGSSNGTLLEERPL 399
>gi|444911435|ref|ZP_21231610.1| hypothetical protein D187_02954 [Cystobacter fuscus DSM 2262]
gi|444718193|gb|ELW59009.1| hypothetical protein D187_02954 [Cystobacter fuscus DSM 2262]
Length = 466
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 80 PDAFEIAST---EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
PDA S+ ++T+G P D+V+ TVS HA + ++ V DL STNGT +D
Sbjct: 50 PDAGTTVSSSAEKLTLGTAPGN-DLVLTDTTVSRFHAELVRERGGYRVKDLGSTNGTRVD 108
Query: 137 EKRLRSGVVAVASPGSRITFGDT 159
R++ VA GS +TFG T
Sbjct: 109 HVRVQDAYVA---DGSTLTFGGT 128
>gi|444913007|ref|ZP_21233164.1| FHA domain protein [Cystobacter fuscus DSM 2262]
gi|444716420|gb|ELW57271.1| FHA domain protein [Cystobacter fuscus DSM 2262]
Length = 314
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL-VTDLDSTNGTFIDEKRLRSGV 144
A ++ +GR E DMV+ VS HARI G + + DL STNGTF++ ++++
Sbjct: 28 AGKQIVIGRSSE-LDMVLVEDMVSRKHARITVNGAGQISIEDLGSTNGTFVNGEKVKQST 86
Query: 145 VAVASPGSRITFGDTHLAMFR----VSKIDTVEAPSKTEE 180
+ G RI G + L + S++D A + EE
Sbjct: 87 L---KEGDRILIGTSILKLIHQGVGASEVDDAVAKQRLEE 123
>gi|343928766|ref|ZP_08768211.1| hypothetical protein GOALK_120_01930 [Gordonia alkanivorans NBRC
16433]
gi|404260609|ref|ZP_10963890.1| hypothetical protein GONAM_52_00460 [Gordonia namibiensis NBRC
108229]
gi|409392625|ref|ZP_11244179.1| hypothetical protein GORBP_101_00410 [Gordonia rubripertincta NBRC
101908]
gi|343761515|dbj|GAA15137.1| hypothetical protein GOALK_120_01930 [Gordonia alkanivorans NBRC
16433]
gi|403197568|dbj|GAB87413.1| hypothetical protein GORBP_101_00410 [Gordonia rubripertincta NBRC
101908]
gi|403400917|dbj|GAC02300.1| hypothetical protein GONAM_52_00460 [Gordonia namibiensis NBRC
108229]
Length = 154
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +++G+ P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRISLGQQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RLRSGV 144
++ + V
Sbjct: 130 KVTTAV 135
>gi|121596327|ref|YP_988223.1| FHA domain-containing protein [Acidovorax sp. JS42]
gi|120608407|gb|ABM44147.1| FHA domain containing protein [Acidovorax sp. JS42]
Length = 211
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
TVGR P D+VI VSG HA GD + V DL STNGT+++ K ++
Sbjct: 24 TVGRRPYN-DVVIDNLAVSGEHAVFLMNGDDVEVEDLGSTNGTYVNGKAIK 73
>gi|441521794|ref|ZP_21003452.1| hypothetical protein GSI01S_16_01400 [Gordonia sihwensis NBRC
108236]
gi|441458732|dbj|GAC61413.1| hypothetical protein GSI01S_16_01400 [Gordonia sihwensis NBRC
108236]
Length = 154
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P RAD +V+ S HARI +GD V DL STNGT++D
Sbjct: 70 LANTRITLGTQPVLIGRADDSTLVLTDDYASERHARISPRGDDWYVEDLGSTNGTYLDRA 129
Query: 139 RLRSGVVA 146
++ + V A
Sbjct: 130 KVTTAVRA 137
>gi|358451164|ref|ZP_09161598.1| FHA domain-containing protein [Marinobacter manganoxydans MnI7-9]
gi|385330638|ref|YP_005884589.1| hypothetical protein HP15_897 [Marinobacter adhaerens HP15]
gi|311693788|gb|ADP96661.1| protein containing forkhead-associated domain [Marinobacter
adhaerens HP15]
gi|357224397|gb|EHJ02928.1| FHA domain-containing protein [Marinobacter manganoxydans MnI7-9]
Length = 116
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL-------VTDLDSTNGT 133
+ FE+ E +GR P+ D+ I +VSG HA I+ ++ L +TD +STNGT
Sbjct: 14 NTFELGQPETRIGRRPDN-DIQIDEISVSGQHALIEAVPNAYLEGTVDYYITDSNSTNGT 72
Query: 134 FIDEKRL 140
F++E R+
Sbjct: 73 FVNELRV 79
>gi|408677160|ref|YP_006876987.1| putative ABC transporter ATP-binding protein [Streptomyces
venezuelae ATCC 10712]
gi|328881489|emb|CCA54728.1| putative ABC transporter ATP-binding protein [Streptomyces
venezuelae ATCC 10712]
Length = 872
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S T+GR P+ D+VI A VS HA I G S ++ D STNGTF+ +R+ +
Sbjct: 22 SRSYTLGRDPQ-GDLVIDDARVSWRHATISWGGRSWVIEDHGSTNGTFLLGQRIHQVEIG 80
Query: 147 VASPGSRITFGD 158
PGS + G+
Sbjct: 81 ---PGSAVHLGN 89
>gi|115373450|ref|ZP_01460747.1| nitrogen fixation protein AnfA [Stigmatella aurantiaca DW4/3-1]
gi|115369456|gb|EAU68394.1| nitrogen fixation protein AnfA [Stigmatella aurantiaca DW4/3-1]
Length = 443
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIASTE---VTVGRLPERADMVIPVATVSGLHARIQKK 118
LQP G G V PDA T+ +TVG PE +++ T S H IQ
Sbjct: 3 LQP-GTGPHKCRLLVVAGPDAGRSLVTDKERLTVGAHPENDLVLVEDRTASRHHFEIQFT 61
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
G L+ DL STNGTF+D +R+ A SP S++ G +
Sbjct: 62 GRGPLLVDLGSTNGTFLDGRRVER---AYLSPASQVRAGSS 99
>gi|386285898|ref|ZP_10063104.1| hypothetical protein DOK_00904 [gamma proteobacterium BDW918]
gi|385281051|gb|EIF44957.1| hypothetical protein DOK_00904 [gamma proteobacterium BDW918]
Length = 361
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+P A+ ++GR + D+VI A +S HAR++ D +TDL STNG+F++ +
Sbjct: 16 LPQQIPFAAQATSIGRGADN-DIVIHNAALSRRHARLELVNDKPALTDLGSTNGSFVNRQ 74
Query: 139 RL 140
R+
Sbjct: 75 RI 76
>gi|269215525|ref|ZP_06159379.1| putative FHA domain protein [Slackia exigua ATCC 700122]
gi|269131012|gb|EEZ62087.1| putative FHA domain protein [Slackia exigua ATCC 700122]
Length = 141
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ F +A+ +T+GR P+ D+ + TVS HA I++ + DLDS NG +++ + +
Sbjct: 56 NVFRLAADVITIGRSPQ-CDIFLNDMTVSRSHAEIRRVNGVFHIVDLDSFNGLWVNNRNV 114
Query: 141 R 141
R
Sbjct: 115 R 115
>gi|442320896|ref|YP_007360917.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441488538|gb|AGC45233.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 177
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 61 LLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHA--RIQKK 118
LL + D D + F P D E+TVGR D+V+P +VS HA R
Sbjct: 61 LLAMLRDFDNLEVHFLNPKVDG-----EELTVGR--SECDLVVPDPSVSQHHATLRWNAA 113
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKT 178
LV D S NGT+I+ L + G + FGD A F + +TV +
Sbjct: 114 TGGFLVRDAQSMNGTWINGAPLGFRAQVTLNDGDTLAFGD---AQFLYLRAETVHEHLRL 170
Query: 179 EESEEK 184
+EK
Sbjct: 171 ASPQEK 176
>gi|308163256|gb|EFO65612.1| Hypothetical protein GLP15_1713 [Giardia lamblia P15]
Length = 422
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+ VGR + D+ + ++SG HA+I +G + V DL+S NGT+I++ ++++ V V
Sbjct: 21 IVVGRSAD-CDISLDSRSISGHHAKILLEGPKNSAVIDLNSRNGTYINDIKIKNDSVPVY 79
Query: 149 SPGSRITFGDTHLAMFRVS-KIDTVEAPSKTEESEEKGDSP 188
PG + FG T L FR+ +D P T ++ E D+P
Sbjct: 80 -PGDALRFG-TDLPPFRLEFSVDKAIEPLSTPKASE--DTP 116
>gi|153006614|ref|YP_001380939.1| FHA domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152030187|gb|ABS27955.1| FHA domain containing protein [Anaeromyxobacter sp. Fw109-5]
Length = 306
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + +GR PE + + I +S +HA +++G+ + V DL+S NGTF+ E R+
Sbjct: 10 FVLPDIPTVLGRSPE-SHLQIGDPWISSMHAMFERRGEEVWVIDLESRNGTFLGEDRVGE 68
Query: 143 GVVAVASPGSRITFGDTHL 161
A GS + FG T +
Sbjct: 69 ---ARLDDGSIVRFGRTQV 84
>gi|338532373|ref|YP_004665707.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337258469|gb|AEI64629.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 159
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGTFIDEKRLRSG 143
A +VTVG E D+V+ +TVS LHAR +++ + L VTDL+S GT+ D + G
Sbjct: 56 ADADVTVGSGAE-CDIVLAESTVSRLHARFRREPHTGLWSVTDLESERGTYQDGVLILPG 114
Query: 144 VVAVASPGSRITFGDTHLAMFR 165
A SR+T G+ L +
Sbjct: 115 RPAPLLCRSRLTLGNVELVFLQ 136
>gi|163846328|ref|YP_001634372.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222524092|ref|YP_002568563.1| serine/threonine protein kinase with FHA domain-containing protein
[Chloroflexus sp. Y-400-fl]
gi|163667617|gb|ABY33983.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222447971|gb|ACM52237.1| serine/threonine protein kinase with FHA domain protein
[Chloroflexus sp. Y-400-fl]
Length = 460
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 109 SGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
S LHA I+++GD ++TD STNGT I+ K++ V G RI G+ +
Sbjct: 403 SRLHAIIERRGDHYILTDQKSTNGTEINGKQILPNVPQRLQAGDRIKIGEVEM 455
>gi|359463926|ref|ZP_09252489.1| ABC transporter ATP-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 999
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++T GR PE V+ VS H +I + S V DL S+NGTF+D +++RS
Sbjct: 240 QLTFGRDPENTH-VLDHPVVSRFHTQIISQDGSWFVEDLHSSNGTFVDGQQIRSQ--QPL 296
Query: 149 SPGSRITFG 157
PGS I G
Sbjct: 297 HPGSTIRIG 305
>gi|159901490|ref|YP_001547737.1| FHA domain-containing protein [Herpetosiphon aurantiacus DSM 785]
gi|159894529|gb|ABX07609.1| FHA domain containing protein [Herpetosiphon aurantiacus DSM 785]
Length = 158
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 14/89 (15%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
AFE+ + + +GR P+ +D+ + + +S HA ++ +GDS + D STNGTFI++
Sbjct: 79 AFELGAVNM-IGRRPD-SDVALNDSFLSSEHALLEWRGDSWWLEDQRSTNGTFIND---- 132
Query: 142 SGVVAVASPGSRITFGDTHLAMFRVSKID 170
+ VA P + I +GD + R+ +I+
Sbjct: 133 ---IEVADP-TPIVYGD----IIRIGRIE 153
>gi|397729684|ref|ZP_10496460.1| putative transcriptional regulator [Rhodococcus sp. JVH1]
gi|396934455|gb|EJJ01589.1| putative transcriptional regulator [Rhodococcus sp. JVH1]
Length = 377
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F I S V +GR+P+ D+V+ VS H I G + ++ DL S+NG ++ R+
Sbjct: 295 FRIGSAGVRIGRMPDN-DIVLAQGKVSRHHTIIVDTGMNFVLRDLRSSNGVYVGGNRVVD 353
Query: 143 GVVAVASPGSRITFGDTHL 161
V V G I GDT L
Sbjct: 354 SVWLV--DGDIIRIGDTEL 370
>gi|383806777|ref|ZP_09962338.1| hypothetical protein IMCC13023_03000 [Candidatus Aquiluna sp.
IMCC13023]
gi|383299207|gb|EIC91821.1| hypothetical protein IMCC13023_03000 [Candidatus Aquiluna sp.
IMCC13023]
Length = 223
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
E++S + GR AD+ I +S +H I GD + DL STNGTF+D R+
Sbjct: 136 LELSSGTTSFGR-DASADVAIDDRGLSRIHFEIAFNGDVAAIRDLQSTNGTFVDGSRVNE 194
Query: 143 GVVAVASPGSRITFGDTHL 161
V GS+IT G T
Sbjct: 195 ---VVLRSGSKITAGRTEF 210
>gi|326204135|ref|ZP_08193995.1| Forkhead-associated protein [Clostridium papyrosolvens DSM 2782]
gi|325985646|gb|EGD46482.1| Forkhead-associated protein [Clostridium papyrosolvens DSM 2782]
Length = 142
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 60 WLLQPVGDGDTSHI--GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQK 117
W L+ GD S + G VP+ +++T+GR + MV+P VS H +I
Sbjct: 44 WKLRIEYSGDKSSLEDGDIVPI-------GSKLTIGR-NKNNQMVLPSRAVSNFHVKIYF 95
Query: 118 KGDSLLVTDLDSTNGTFIDEKRL 140
+ ++ D+DSTNGTF++ R+
Sbjct: 96 EDGRYMLEDMDSTNGTFVNGNRV 118
>gi|111017531|ref|YP_700503.1| EmbR family transcriptional regulator [Rhodococcus jostii RHA1]
gi|110817061|gb|ABG92345.1| probable transcriptional regulator, EmbR family protein
[Rhodococcus jostii RHA1]
Length = 377
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F I S V +GR+P+ D+V+ VS H I G + ++ DL S+NG ++ R+
Sbjct: 295 FRIGSAGVRIGRMPDN-DIVLAQGKVSRHHTIIVDTGMNFVLRDLRSSNGVYVGGNRVVD 353
Query: 143 GVVAVASPGSRITFGDTHL 161
V V G I GDT L
Sbjct: 354 SVWLV--DGDIIRIGDTEL 370
>gi|383806776|ref|ZP_09962337.1| hypothetical protein IMCC13023_02990 [Candidatus Aquiluna sp.
IMCC13023]
gi|383299206|gb|EIC91820.1| hypothetical protein IMCC13023_02990 [Candidatus Aquiluna sp.
IMCC13023]
Length = 162
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EV +GR P +DMVI S +HA++ G ++ DL+STNGT +D K++ + V A
Sbjct: 89 EVLIGRAPS-SDMVISDEFASSMHAKLVHVGADWVLQDLNSTNGTNLDGKKITTPVTIRA 147
Query: 149 SPGSRI 154
RI
Sbjct: 148 GMTIRI 153
>gi|378725450|gb|EHY51909.1| serine/threonine-protein kinase Chk2 [Exophiala dermatitidis
NIH/UT8656]
Length = 703
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+GR PE DM+I + TVS H I + GD++ V + S+NGTF++E +
Sbjct: 198 IGRHPE-CDMIIDIPTVSNRHCLIFNETRNGDTVAVLEDLSSNGTFVNEALVGRNKRREL 256
Query: 149 SPGSRITFGDTHLAMFRVSK 168
G IT D +FR K
Sbjct: 257 EDGDEITILDEARFVFRYPK 276
>gi|359415233|ref|ZP_09207698.1| FHA domain containing protein [Clostridium sp. DL-VIII]
gi|357174117|gb|EHJ02292.1| FHA domain containing protein [Clostridium sp. DL-VIII]
Length = 147
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++T+GR + +V+ VSG HA+I + D+L + DL+STNGT+++ +L
Sbjct: 73 SDLTIGR-KDNNSIVLGDQHVSGCHAKIIVRNDTLYLEDLNSTNGTYLNGNKL 124
>gi|307726907|ref|YP_003910120.1| FHA domain containing protein [Burkholderia sp. CCGE1003]
gi|307587432|gb|ADN60829.1| FHA domain containing protein [Burkholderia sp. CCGE1003]
Length = 868
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG+ L + DL STNGTF+ KRL + G + FG H ++
Sbjct: 180 VNYISRRHAHIFLKGNELYLEDLGSTNGTFVGGKRLDESAQPLVD-GDIVAFGGDHF-VY 237
Query: 165 RVSKIDTVEAPSKTE 179
RV T+ P + E
Sbjct: 238 RV----TLHRPPEAE 248
>gi|310825354|ref|YP_003957712.1| Fis family sigma-54 dependent transcriptional regulator
[Stigmatella aurantiaca DW4/3-1]
gi|309398426|gb|ADO75885.1| Sigma-54 dependent transcriptional regulator, Fis family
[Stigmatella aurantiaca DW4/3-1]
Length = 476
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+TVG PE +++ T S H IQ G L+ DL STNGTF+D +R+ A S
Sbjct: 66 LTVGAHPENDLVLVEDRTASRHHFEIQFTGRGPLLVDLGSTNGTFLDGRRVER---AYLS 122
Query: 150 PGSRITFGDT 159
P S++ G +
Sbjct: 123 PASQVRAGSS 132
>gi|163847548|ref|YP_001635592.1| forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
gi|222525398|ref|YP_002569869.1| FHA domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163668837|gb|ABY35203.1| Forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
gi|222449277|gb|ACM53543.1| FHA domain containing protein [Chloroflexus sp. Y-400-fl]
Length = 153
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
+GR P D+V+ + +S HAR++++G L+ DL+STNGTF++ + +G+ V P
Sbjct: 79 VIGRSPH-CDIVLNDSFLSSEHARLERRGGVWLLEDLNSTNGTFLNGFEV-TGLTEV-HP 135
Query: 151 GSRITFGDTHLAM 163
G I G L +
Sbjct: 136 GDAIRVGRVELRL 148
>gi|332707924|ref|ZP_08427928.1| FHA domain-containing protein, partial [Moorea producens 3L]
gi|332353303|gb|EGJ32839.1| FHA domain-containing protein [Moorea producens 3L]
Length = 70
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
++T+GR A++ + VS HA+I+++ + + + DL+S NGT ++EKRL+
Sbjct: 17 KLTIGRNGHGAEIEVDGRRVSREHAQIERRSEGVFIIDLESANGTKVNEKRLQ 69
>gi|170781742|ref|YP_001710074.1| hypothetical protein CMS_1347 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156310|emb|CAQ01458.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 160
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 78 PMPDAFEIASTEVTV-GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
P A + +VTV GR P+ AD+ + TVS HA ++G S V DL S NGT+ D
Sbjct: 65 PNQGARFLLDADVTVAGRHPD-ADIFLDDVTVSRRHAEFVRQGTSFQVKDLGSLNGTYFD 123
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTV 172
R+ + A+ G+ + G L F S+ D V
Sbjct: 124 GVRIDT---ALLQDGAEVQVGKFRL-TFYASRTDLV 155
>gi|291303906|ref|YP_003515184.1| FHA domain-containing protein [Stackebrandtia nassauensis DSM
44728]
gi|290573126|gb|ADD46091.1| FHA domain containing protein [Stackebrandtia nassauensis DSM
44728]
Length = 158
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 84 EIASTEVTVGRLPER------ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
E+A T++ +G P R + +VI SG HA++ +GD LV DL STNGT++
Sbjct: 73 ELAGTQLPLGNAPIRIGRAPDSTLVITDDYASGRHAQLVPRGDQWLVEDLGSTNGTYLGR 132
Query: 138 KRLRSGVVAVASPGSRITFGDTHLAM 163
++ SG + + G I G T + +
Sbjct: 133 AKV-SGPTPIPA-GVPIRIGRTSIEL 156
>gi|50953947|ref|YP_061235.1| secreted protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950429|gb|AAT88130.1| secreted protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 185
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 86 ASTEVTVGRLP------ERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
A TE+ +GR P + +VI S HAR+ D ++ DLDSTNGTF+D +R
Sbjct: 102 AGTELALGRDPITIGRSNESGLVIRDDYTSTHHARLLLWNDEWMIQDLDSTNGTFLDGRR 161
Query: 140 L 140
+
Sbjct: 162 V 162
>gi|419859685|ref|ZP_14382336.1| putative secreted protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387983865|gb|EIK57316.1| putative secreted protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 155
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
TE+T+GR + D V+ S HAR+ K+G DLDS NGT++ R+
Sbjct: 81 TEITLGRSKD-CDFVVGDDYASARHARLIKRGSEWFAEDLDSRNGTYVGGYRI 132
>gi|379706293|ref|YP_005261498.1| hypothetical protein NOCYR_0029 [Nocardia cyriacigeorgica GUH-2]
gi|374843792|emb|CCF60854.1| conserved protein of unknown function [Nocardia cyriacigeorgica
GUH-2]
Length = 155
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A T +T+G P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 71 LAGTRITLGTQPVLIGRADDSTLVLTDDYASTRHARLSQRGDDWYVEDLGSTNGTYLDRA 130
Query: 139 RLRSGV-VAVASP 150
++ + V V + +P
Sbjct: 131 KVTTAVRVPLGAP 143
>gi|330827117|ref|YP_004390420.1| FHA domain-containing protein [Alicycliphilus denitrificans K601]
gi|329312489|gb|AEB86904.1| FHA domain containing protein [Alicycliphilus denitrificans K601]
Length = 208
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
TVGR P D+VI VSG HA GD + V DL STNGT+++ K ++
Sbjct: 24 TVGRRPYN-DVVIDNLAVSGEHAVFVMTGDDVQVYDLGSTNGTYVNGKAIKQ 74
>gi|148273065|ref|YP_001222626.1| transcriptional regulator [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830995|emb|CAN01940.1| putative transcriptional regulator with FHA domain [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 160
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 78 PMPDAFEIASTEVTV-GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
P A + +VTV GR P+ AD+ + TVS HA ++G S V DL S NGT+ D
Sbjct: 65 PNQGARFLLDADVTVAGRHPD-ADIFLDDVTVSRRHAEFVRQGTSFQVKDLGSLNGTYFD 123
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTV 172
R+ + A+ G+ + G L F S+ D V
Sbjct: 124 GVRIDT---ALLQDGAEVQVGKFRL-TFYASRTDLV 155
>gi|108762591|ref|YP_632168.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108466471|gb|ABF91656.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 180
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 61 LLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHA--RIQKK 118
LL + D D + F P D E+TVGR E D+V+P +VS HA R
Sbjct: 63 LLAMLRDFDNLEVHFLQPSVDG-----EELTVGR-TEACDLVVPDPSVSQHHATMRWSAA 116
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
V D +S NGTFI+ L + G + FGD R +
Sbjct: 117 RGGFSVRDAESMNGTFINGAPLGYRAQVLLHDGDTLAFGDAQFLYLRAETV 167
>gi|384248272|gb|EIE21756.1| FAD/NAD(P)-binding domain-containing protein [Coccomyxa
subellipsoidea C-169]
Length = 626
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 67 DGDTSHIGFKVPMPDA-FEIASTEVTVGRLPERADMVIPVATVSGLHARIQK-KGDSLLV 124
+G+ G ++ P+A EI + V +G + AD+ + V+ HAR++ + V
Sbjct: 490 NGERHQFGLRIAYPEAALEICTAGVLIGSGAD-ADVKLDSPVVAEAHARLRNSEAGGYTV 548
Query: 125 TDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
DL S +GT+++ +RL+ A PG + FG R +I V A + S E
Sbjct: 549 EDLASPSGTWLNGRRLQPRQPAQLCPGDELCFGCRETEAVRY-RIKMVHASVCEQLSTEN 607
Query: 185 GD 186
G+
Sbjct: 608 GN 609
>gi|354554654|ref|ZP_08973958.1| adenylate/guanylate cyclase [Cyanothece sp. ATCC 51472]
gi|353553463|gb|EHC22855.1| adenylate/guanylate cyclase [Cyanothece sp. ATCC 51472]
Length = 328
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ T+GR + D I +S HA +Q + GD LL+ DL S NGTF++++R+
Sbjct: 24 VGKNYWTIGRGKDN-DFSIGDHCISRNHAILQSTETGDFLLI-DLGSRNGTFVNDRRV-- 79
Query: 143 GVVAVASPGSRITFGDTHLAM 163
G+ G ++TFG T++A
Sbjct: 80 GIPVTLKSGDKVTFGKTNVAF 100
>gi|326331336|ref|ZP_08197627.1| GarA protein [Nocardioidaceae bacterium Broad-1]
gi|325950870|gb|EGD42919.1| GarA protein [Nocardioidaceae bacterium Broad-1]
Length = 160
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + V GR P+ +D+ + TVS HA ++ GD+ V+D+ S NGT+++ R+ +
Sbjct: 77 FLLDQDTVVAGRHPD-SDIFLDDVTVSRRHAEFKRTGDTFEVSDVGSLNGTYVNRDRIEN 135
Query: 143 GVVAVASPGSRITFGDTHLAMF 164
V G + G L +
Sbjct: 136 ---VVLKDGDEVQVGKFRLVFY 154
>gi|122879180|ref|YP_201030.6| hypothetical protein XOO2391 [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 269
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDYPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|108763750|ref|YP_630478.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467630|gb|ABF92815.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 473
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++ T+GR P R +V+ VS HA + + GD + + DL+S+NGT+ + +R+
Sbjct: 392 VSTERFTIGRGP-RCSLVVKSERVSREHAVVTRVGDEVFIEDLNSSNGTWFNNERI 446
>gi|405371863|ref|ZP_11027209.1| Sigma-54 dependent transcriptional regulator, Fis family
[Chondromyces apiculatus DSM 436]
gi|397088700|gb|EJJ19670.1| Sigma-54 dependent transcriptional regulator, Fis family
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 486
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 107 TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRV 166
T S H IQ L+ DL STNGTF+D +R+ A SPGS+I G + L +
Sbjct: 93 TASRHHFEIQFTERGYLLVDLGSTNGTFLDGRRIER---AYLSPGSQIRAGSSLLTFAPL 149
Query: 167 SKIDTVEAPSKTEESEEKGDS 187
+ T+E + E E G S
Sbjct: 150 DEEVTIEPDREGELCEMVGQS 170
>gi|442324106|ref|YP_007364127.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441491748|gb|AGC48443.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 174
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGTFID 136
EVTVGR PE D+V+P TVS HAR + + + + VTDL+S GT+++
Sbjct: 74 EVTVGRSPE-CDIVLPEPTVSRQHARFRPEPHTEVWSVTDLESHGGTYLE 122
>gi|434402242|ref|YP_007145127.1| FHA domain-containing protein [Cylindrospermum stagnale PCC 7417]
gi|428256497|gb|AFZ22447.1| FHA domain-containing protein [Cylindrospermum stagnale PCC 7417]
Length = 304
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G + F
Sbjct: 243 VSRIHADIRVEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDMVTF 299
>gi|310819572|ref|YP_003951930.1| FHA domain/GGDEF domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309392644|gb|ADO70103.1| FHA domain/GGDEF domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 293
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ I E T+GR E +V+ + VS HARI + + V DL STNGT+++++ +R
Sbjct: 38 YVIEDVEYTIGR-DEGNHIVVDLDNVSRRHARILVRQGRMFVEDLGSTNGTYLNDQEVRQ 96
>gi|441514638|ref|ZP_20996454.1| hypothetical protein GOAMI_31_00280 [Gordonia amicalis NBRC 100051]
gi|441450549|dbj|GAC54415.1| hypothetical protein GOAMI_31_00280 [Gordonia amicalis NBRC 100051]
Length = 154
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +++G+ P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 70 LANTRISLGQQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 129
Query: 139 RL 140
++
Sbjct: 130 KV 131
>gi|29833014|ref|NP_827648.1| ABC transporter ATP-binding protein [Streptomyces avermitilis
MA-4680]
gi|29610135|dbj|BAC74183.1| putative ABC transporter ATP-binding protein [Streptomyces
avermitilis MA-4680]
Length = 843
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
AS T+GR P+ D+ + A VS HA I G S ++ D STNGTF+ +R+ +
Sbjct: 17 ASRPYTLGRDPQ-GDITLDDARVSWRHATISWNGRSWVIEDHGSTNGTFVQGQRIHQMEI 75
Query: 146 AVASPGSRITFGD 158
PGS + G+
Sbjct: 76 G---PGSAVHLGN 85
>gi|242022558|ref|XP_002431707.1| Kanadaptin, putative [Pediculus humanus corporis]
gi|212517015|gb|EEB18969.1| Kanadaptin, putative [Pediculus humanus corporis]
Length = 447
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 99 ADMVIPVATVSGLHARIQKK--GDS-----LLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
D+V+ TVS HA +Q + GDS + DL+ST+GTF+++ R++S + G
Sbjct: 11 CDIVMAHPTVSRFHAVMQYRTEGDSDNNPGFYIYDLNSTHGTFLNKNRIKSNIYVRVQVG 70
Query: 152 SRITFG 157
I G
Sbjct: 71 HIIKLG 76
>gi|38232694|ref|NP_938461.1| hypothetical protein DIP0058 [Corynebacterium diphtheriae NCTC
13129]
gi|38198952|emb|CAE48566.1| Putative secreted protein [Corynebacterium diphtheriae]
Length = 162
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
TE+T+GR + D V+ S HAR+ K+G DLDS NGT++ R+
Sbjct: 88 TEITLGRSKD-CDFVVGDDYASARHARLIKRGSEWFAEDLDSRNGTYVGGYRI 139
>gi|414152952|ref|ZP_11409279.1| Forkhead-associated protein [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
gi|411455334|emb|CCO07181.1| Forkhead-associated protein [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
Length = 262
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
F + ++GR + D+V+ ++VS HA+I+K G +TDL+STNGT+++
Sbjct: 183 FPLTDYRTSIGRR-DTCDIVLADSSVSRRHAQIEKTGGRFWLTDLNSTNGTYVN 235
>gi|440718187|ref|ZP_20898651.1| diguanylate cyclase [Rhodopirellula baltica SWK14]
gi|436436729|gb|ELP30449.1| diguanylate cyclase [Rhodopirellula baltica SWK14]
Length = 331
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 80 PDAFE----IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
PD E + E +GR P+ +D+ + A+VS HA++ + D L+ DL STNGT +
Sbjct: 68 PDVVEGMQLLEQEEFQIGRSPD-SDLPLFDASVSRQHAKLIRGQDGYLIRDLGSTNGTMV 126
Query: 136 DEKRLRSGVVAVASPGSRI-TFGDTHLAMFRVSKIDTVE 173
+E ++S + + RI +F +FR D++E
Sbjct: 127 NETTIQSDHMLESGDTVRIGSF------LFRFLSADSIE 159
>gi|425735994|ref|ZP_18854304.1| FHA domain-containing protein [Brevibacterium casei S18]
gi|425478928|gb|EKU46111.1| FHA domain-containing protein [Brevibacterium casei S18]
Length = 171
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS-- 142
++ VT GR P+ +VI S HARI +G + ++ DL STNGTF+D ++ +
Sbjct: 94 LSGAPVTFGRAPDNT-IVIGDDFASSHHARIIARGGAWVLEDLSSTNGTFVDGSKITAPF 152
Query: 143 --GVVAVASPGSRITFGDTHL 161
G+ G++IT G T L
Sbjct: 153 DLGI------GNQITIGHTTL 167
>gi|149198858|ref|ZP_01875900.1| ABC transporter ATP-binding protein [Lentisphaera araneosa
HTCC2155]
gi|149138056|gb|EDM26467.1| ABC transporter ATP-binding protein [Lentisphaera araneosa
HTCC2155]
Length = 681
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ +GR E +D++I +VS HA+I + S+++ DL S NGT ++ +++R +V
Sbjct: 602 LVIGR-NEESDLMIEDISVSRRHAKISIRDKSVMLEDLKSINGTKVNLEKVRRSIVV--- 657
Query: 150 PGSRITFGDTHLAM 163
PG +T G+ +
Sbjct: 658 PGDVVTIGNVSFLL 671
>gi|381181323|ref|ZP_09890157.1| FHA domain containing protein [Treponema saccharophilum DSM 2985]
gi|380766543|gb|EIC00548.1| FHA domain containing protein [Treponema saccharophilum DSM 2985]
Length = 130
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++++GR P+ +V+ S LHA IQK D+ + D STNGTF++ R+
Sbjct: 56 KMSIGRNPD-CTIVVEDKAASRLHATIQKIKDAYFLKDEKSTNGTFVNGHRIPEDKFVKL 114
Query: 149 SPGSRITFGDTHLAM 163
G + G+T L
Sbjct: 115 KAGDELKIGNTTLVF 129
>gi|376247415|ref|YP_005139359.1| putative secreted protein [Corynebacterium diphtheriae HC04]
gi|376250220|ref|YP_005137101.1| putative secreted protein [Corynebacterium diphtheriae HC03]
gi|376256064|ref|YP_005143955.1| putative secreted protein [Corynebacterium diphtheriae VA01]
gi|376283552|ref|YP_005156762.1| putative secreted protein [Corynebacterium diphtheriae 31A]
gi|376286580|ref|YP_005159146.1| putative secreted protein [Corynebacterium diphtheriae BH8]
gi|376289254|ref|YP_005161501.1| putative secreted protein [Corynebacterium diphtheriae C7 (beta)]
gi|376292167|ref|YP_005163841.1| putative secreted protein [Corynebacterium diphtheriae HC02]
gi|371577067|gb|AEX40735.1| putative secreted protein [Corynebacterium diphtheriae 31A]
gi|371583914|gb|AEX47579.1| putative secreted protein [Corynebacterium diphtheriae BH8]
gi|372102650|gb|AEX66247.1| putative secreted protein [Corynebacterium diphtheriae C7 (beta)]
gi|372109490|gb|AEX75550.1| putative secreted protein [Corynebacterium diphtheriae HC02]
gi|372111724|gb|AEX77783.1| putative secreted protein [Corynebacterium diphtheriae HC03]
gi|372113983|gb|AEX80041.1| putative secreted protein [Corynebacterium diphtheriae HC04]
gi|372118581|gb|AEX82315.1| putative secreted protein [Corynebacterium diphtheriae VA01]
Length = 162
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
TE+T+GR + D V+ S HAR+ K+G DLDS NGT++ R+
Sbjct: 88 TEITLGRSKD-CDFVVGDDYASARHARLIKRGSEWFAEDLDSRNGTYVGGYRI 139
>gi|78064007|ref|YP_373915.1| FHA domain-containing protein [Burkholderia sp. 383]
gi|77971892|gb|ABB13271.1| FHA domain containing protein [Burkholderia sp. 383]
Length = 333
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR R D VI A+VS +HA I+ G + D S+NGT + LR G AV G
Sbjct: 22 GRDTARCDTVIRDASVSRVHAHIRWAGGLWELHD-HSSNGTSVSGVPLRDGEHAVLQRGD 80
Query: 153 RITFGDTHLAMFRVSKID 170
I FG +A +RV +D
Sbjct: 81 VIRFGTAGVAPWRVDALD 98
>gi|153956167|ref|YP_001396932.1| hypothetical protein CKL_3570 [Clostridium kluyveri DSM 555]
gi|219856492|ref|YP_002473614.1| hypothetical protein CKR_3149 [Clostridium kluyveri NBRC 12016]
gi|146349025|gb|EDK35561.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219570216|dbj|BAH08200.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 146
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQ-KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
EVT+GR + +++ SG HARI K ++ DL STNGT ++ K+LR
Sbjct: 72 EVTIGRKNDN-QLILEDPYTSGHHARIYIKNAKDCVLEDLGSTNGTLLNGKKLRGK--HY 128
Query: 148 ASPGSRITFGDT 159
+PG I G+T
Sbjct: 129 LAPGDEIKIGNT 140
>gi|405365014|ref|ZP_11026460.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397089579|gb|EJJ20488.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 312
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
A ++ +GR E DMV+ VS HARI S+ + DL STNGTF++ ++++ +
Sbjct: 25 ADKQIVIGRSSE-LDMVLVEDMVSRKHARISFSDGSITIEDLGSTNGTFVNGEKVKQSRL 83
Query: 146 AVASPGSRITFGDTHLAM 163
G RI G + L +
Sbjct: 84 ---KEGDRILIGTSILKL 98
>gi|375289777|ref|YP_005124317.1| putative secreted protein [Corynebacterium diphtheriae 241]
gi|375292023|ref|YP_005126562.1| putative secreted protein [Corynebacterium diphtheriae INCA 402]
gi|376241746|ref|YP_005132598.1| putative secreted protein [Corynebacterium diphtheriae CDCE 8392]
gi|376244609|ref|YP_005134848.1| putative secreted protein [Corynebacterium diphtheriae HC01]
gi|376253172|ref|YP_005141631.1| putative secreted protein [Corynebacterium diphtheriae PW8]
gi|371579448|gb|AEX43115.1| putative secreted protein [Corynebacterium diphtheriae 241]
gi|371581694|gb|AEX45360.1| putative secreted protein [Corynebacterium diphtheriae INCA 402]
gi|372104988|gb|AEX71050.1| putative secreted protein [Corynebacterium diphtheriae CDCE 8392]
gi|372107239|gb|AEX73300.1| putative secreted protein [Corynebacterium diphtheriae HC01]
gi|372116256|gb|AEX68726.1| putative secreted protein [Corynebacterium diphtheriae PW8]
Length = 162
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
TE+T+GR + D V+ S HAR+ K+G DLDS NGT++ R+
Sbjct: 88 TEITLGRSKD-CDFVVGDDYASARHARLIKRGSEWFAEDLDSRNGTYVGGYRI 139
>gi|310819388|ref|YP_003951746.1| FHA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309392460|gb|ADO69919.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 528
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 73 IGFKVPMPDA------FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTD 126
+GF++ + + F+ EV +GR PE D+V+ A +S H RI G+ V D
Sbjct: 1 MGFQLKIAEGKDAGKEFQFEHEEVLIGRTPE-CDVVLYDAGISRKHCRIFSLGERYFVED 59
Query: 127 LDSTNGTFID 136
+ S+NGT ++
Sbjct: 60 MGSSNGTKVN 69
>gi|149923797|ref|ZP_01912189.1| Pkn9 associate protein 1 [Plesiocystis pacifica SIR-1]
gi|149815368|gb|EDM74910.1| Pkn9 associate protein 1 [Plesiocystis pacifica SIR-1]
Length = 237
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
P + +T+GR E D+ + A +SG H +I + G+ + DL STNGT+++ ++
Sbjct: 13 PREMKFDRPAITIGRR-EGNDLRLQTAGISGKHCKISRVGNGFQLEDLGSTNGTYLNRRK 71
Query: 140 L 140
+
Sbjct: 72 V 72
>gi|220927964|ref|YP_002504873.1| FHA domain-containing protein [Clostridium cellulolyticum H10]
gi|219998292|gb|ACL74893.1| FHA domain containing protein [Clostridium cellulolyticum H10]
Length = 475
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 21 LQGLRIKAKKHRNLGAIRASEADSSTTTTTTSTDV---AAERWLLQPVGDGDTSHIGFKV 77
LQ + K +++ L +ASE DS ++ E +L+ D ++ K
Sbjct: 327 LQYITEKMRENSALTVKQASEKDSKKAEEVHIKNINNRGGETVILKSNEPKDIPYLQEK- 385
Query: 78 PMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
D ++ T + VGR+ D ++ V +HA I + S V D S NGT+I++
Sbjct: 386 DGEDIIKVNKTSILVGRMGSFVDHIVDNNAVGKVHAEIINEDGSYFVMDCSSRNGTYIND 445
Query: 138 KRLRSGVVAVASPGSRITFGDTHLAM 163
R++ + I F +
Sbjct: 446 GRIKPNTKTSVNNNDVIRFANKEFIF 471
>gi|148271198|ref|YP_001220759.1| hypothetical protein CMM_0020 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829128|emb|CAN00026.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 194
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ + +T+GR E + +VI S HAR+ D ++ DLDSTNGTF+D KR+
Sbjct: 117 LGTEPLTIGRSSE-SGLVIRDDYTSTHHARLLLWNDEWMIQDLDSTNGTFLDGKRV 171
>gi|213965994|ref|ZP_03394184.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium amycolatum
SK46]
gi|213951408|gb|EEB62800.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium amycolatum
SK46]
Length = 141
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
T GR P+ +D+ + TVS HA +K GDS V D+ S NGT+++ + S V+A
Sbjct: 69 TAGRHPD-SDIFLDDVTVSRRHAEFRKNGDSYEVVDVGSLNGTYVNREPKNSAVLA 123
>gi|170780484|ref|YP_001708816.1| hypothetical protein CMS_0022 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155052|emb|CAQ00148.1| putative secreted protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 193
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ + +T+GR E + +VI S HAR+ D ++ DLDSTNGTF+D KR+
Sbjct: 116 LGTEPLTIGRSSE-SGLVIRDDYTSTHHARLLLWNDEWMIQDLDSTNGTFLDGKRV 170
>gi|219849334|ref|YP_002463767.1| FHA domain-containing protein [Chloroflexus aggregans DSM 9485]
gi|219543593|gb|ACL25331.1| FHA domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 1011
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR--- 139
F+++ T +T+GR P+ + +VI S HA I+++G ++ DL S+NGT ++ K
Sbjct: 17 FQLSDTPITIGRSPDNS-IVIASQLASRRHAEIRREGGVYVLVDLGSSNGTLLNGKPVQR 75
Query: 140 --LRSG 143
LRSG
Sbjct: 76 QILRSG 81
>gi|5902705|sp|Q96375.1|ABA2_CAPAN RecName: Full=Zeaxanthin epoxidase, chloroplastic; AltName:
Full=Beta-cyclohexenyl epoxidase; AltName:
Full=Xanthophyll epoxidase; Flags: Precursor
gi|1673406|emb|CAA62795.1| Xanthophyll epoxidase [Capsicum annuum]
Length = 660
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 37 IRASEADSSTTTTTTSTDVAAER-----WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVT 91
R SE + D A ER WLL P G+ + + + + V+
Sbjct: 502 CRLSEKANDQLRNWFEDDDALERATDAEWLLLPAGNSNAALETLVLSRDENMPCTIGSVS 561
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT-FIDEKRLRSGVVAVASP 150
+P ++ +VIP++ VS +HARI G + L T S +GT FID + R V SP
Sbjct: 562 HANIPGKS-VVIPLSQVSDMHARISYNGGAFLGTAFRSDHGTWFIDNEGRRYRV----SP 616
Query: 151 GSRITFGDTHLAMFRVSK----IDTVEAPSKTEESEEK 184
+ F + + +F K I ++ KT E++
Sbjct: 617 NFPMRFHSSDVIVFGSDKAAFRIKAMKFAPKTAAKEDR 654
>gi|389860431|ref|YP_006362670.1| FHA domain-containing protein [Thermogladius cellulolyticus 1633]
gi|388525334|gb|AFK50532.1| FHA domain containing protein [Thermogladius cellulolyticus 1633]
Length = 111
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 78 PMPD-AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
P+P ++E E +GR P D+V+ TVS LHARI + DL STNGT +D
Sbjct: 23 PLPAVSWEFPPGEYVLGRNPT-CDVVLLDPTVSRLHARIYFSDGEWFIEDLGSTNGTVVD 81
>gi|156741463|ref|YP_001431592.1| winged helix family two component response transcriptional
regulator [Roseiflexus castenholzii DSM 13941]
gi|156232791|gb|ABU57574.1| putative two component transcriptional regulator, winged helix
family [Roseiflexus castenholzii DSM 13941]
Length = 221
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+TVGR P D+VI S HAR ++ + L+ DL+STNGT+++ +R+ V
Sbjct: 28 LTVGRDPAN-DIVIEHPLASRRHARFERDENGYLIRDLESTNGTYVNGERIEGA--QVLH 84
Query: 150 PGSRITFGDTHLAM 163
RI D +
Sbjct: 85 NQDRIWVADAEIVF 98
>gi|441175925|ref|ZP_20969797.1| ABC transporter ATP-binding protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440614757|gb|ELQ78000.1| ABC transporter ATP-binding protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 848
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S ++GR P+ DMV+ A VS HA ++ G S ++ D STNGT++ +R+ +
Sbjct: 11 SRSYSLGRDPQ-GDMVLDDARVSWRHAIVRWGGHSWVIEDQGSTNGTYVQGQRIHQLEIG 69
Query: 147 VASPGSRITFGD 158
PGS + G+
Sbjct: 70 ---PGSAVHLGN 78
>gi|359423029|ref|ZP_09214174.1| hypothetical protein GOAMR_04_00740 [Gordonia amarae NBRC 15530]
gi|358241712|dbj|GAB03756.1| hypothetical protein GOAMR_04_00740 [Gordonia amarae NBRC 15530]
Length = 409
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GR P+ D+V+ S HAR+ + G+ L++ DL S NGTF++ R+ AV
Sbjct: 134 TIGRTPDN-DIVVNDVLASRHHARLSQVGEGLVLEDLHSVNGTFVNGSRISR---AVLRE 189
Query: 151 GSRITFGDTHLAMFR 165
+T G++ + R
Sbjct: 190 NDVVTIGNSDFVVSR 204
>gi|337281399|ref|YP_004620871.1| FHA-domain-containing proteins [Ramlibacter tataouinensis TTB310]
gi|334732476|gb|AEG94852.1| FHA-domain-containing proteins-like protein [Ramlibacter
tataouinensis TTB310]
Length = 218
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
T+GR P D+VI VSG HA +Q G + + DL+STNG++++ K ++
Sbjct: 24 TLGRRPYN-DIVIDNLAVSGEHAVLQMTGSDVYLEDLNSTNGSYVNGKAVK 73
>gi|218248925|ref|YP_002374296.1| guanylate cyclase [Cyanothece sp. PCC 8801]
gi|257061985|ref|YP_003139873.1| adenylate/guanylate cyclase [Cyanothece sp. PCC 8802]
gi|218169403|gb|ACK68140.1| adenylate/guanylate cyclase [Cyanothece sp. PCC 8801]
gi|256592151|gb|ACV03038.1| adenylate/guanylate cyclase [Cyanothece sp. PCC 8802]
Length = 329
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 100 DMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
D IP +S HA +Q + G+ LL+ DL S NGTF++++R+ G+ G ITFG
Sbjct: 38 DCAIPDHCISRNHAILQCTETGEFLLI-DLGSRNGTFVNDRRV--GIPVTLRNGDNITFG 94
Query: 158 DTHLAMF 164
T + +
Sbjct: 95 KTQVEFY 101
>gi|108761898|ref|YP_630236.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108465778|gb|ABF90963.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 312
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
A ++ +GR E DMV+ VS HARI S+ + DL STNGTF++ ++++ +
Sbjct: 25 ADKQIVIGRSSE-LDMVLVEDMVSRKHARISFSDGSITIEDLGSTNGTFVNGEKVKQSRL 83
Query: 146 AVASPGSRITFGDTHLAM 163
G RI G + L +
Sbjct: 84 ---KEGDRILIGTSILKL 98
>gi|383454527|ref|YP_005368516.1| sigma-54 dependent transcription regulator [Corallococcus
coralloides DSM 2259]
gi|380734001|gb|AFE10003.1| sigma-54 dependent transcription regulator [Corallococcus
coralloides DSM 2259]
Length = 460
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 52 STDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGL 111
+T V W ++ VG D G KV D+ ++ D+V+ TVS
Sbjct: 19 ATRVPLHEWTVEVVGGPDK---GKKVTTQDSLVRVGSDAA-------GDLVLSDPTVSRR 68
Query: 112 HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDT 171
H +++ LL+ D S NGTF+D +R+ + A + G ++ G T LA+ ++
Sbjct: 69 HLEVERLPQGLLLRDTGSRNGTFLDGRRI---LQAFVTSGDKVELGKTKLAVKVAARATE 125
Query: 172 VE 173
VE
Sbjct: 126 VE 127
>gi|428226906|ref|YP_007111003.1| FHA domain-containing protein [Geitlerinema sp. PCC 7407]
gi|427986807|gb|AFY67951.1| FHA domain containing protein [Geitlerinema sp. PCC 7407]
Length = 220
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S NGT+I+ + L G G RI+ G L F
Sbjct: 159 VSRIHADIRLEGDAYFIEDVGSANGTYINHQSLLPGNRHRLRSGDRISLGKGDLVTF 215
>gi|75910841|ref|YP_325137.1| adenylate/guanylate cyclase [Anabaena variabilis ATCC 29413]
gi|75704566|gb|ABA24242.1| adenylate/guanylate cyclase [Anabaena variabilis ATCC 29413]
Length = 546
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDE 137
T+GRLPE ++ +P A VS HA++ KK D ++ DL S NGT +++
Sbjct: 25 TIGRLPE-CNLYLPFAGVSRKHAQLVKKADGKWIIEDLGSKNGTQVNQ 71
>gi|297621825|ref|YP_003709962.1| type III secretion system protein SctD [Waddlia chondrophila WSU
86-1044]
gi|297377126|gb|ADI38956.1| putative type III secretion system protein SctD [Waddlia
chondrophila WSU 86-1044]
gi|337294091|emb|CCB92076.1| type III secretion integral inner membrane ring protein [Waddlia
chondrophila 2032/99]
Length = 596
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ-K 117
RWLL+ +G G + F + ++ I G P D+V +VS HA+I
Sbjct: 145 RWLLKVIG-GPNNGAEFSMQTGSSYMI-------GTDPTSCDVVFHDTSVSRQHAKITVS 196
Query: 118 KGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF-RVSKIDTVEAP 175
K D+L + DL S NGT +D L P + +T G T ++ R ++ T+ +P
Sbjct: 197 KNDALSIEDLKSRNGTLVDGNPLEGQ--QTFEPNTLVTLGTTSFVVYDREGEMQTIISP 253
>gi|108763000|ref|YP_632815.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108466880|gb|ABF92065.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 484
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID------ 136
FE A EV +GR E D+V+ VS HARI +GD V D+ S+NGT ++
Sbjct: 19 FEAA--EVNIGRTSEN-DLVLHDHGVSRRHARIVLRGDKYFVADMGSSNGTVLNGGLLSG 75
Query: 137 EKRLRSG 143
E++LR G
Sbjct: 76 EQQLRDG 82
>gi|108757246|ref|YP_631311.1| FHA domain- TPR-repeat-containing protein [Myxococcus xanthus DK
1622]
gi|108461126|gb|ABF86311.1| FHA domain/tetratricopeptide repeat protein [Myxococcus xanthus DK
1622]
Length = 743
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+ +GR + +D++I VS HAR+ +G ++ + D+ S NGTF+D +R+
Sbjct: 21 ELKIGR-QQGSDILITEGGVSRTHARVFDEGGTVFIEDVGSANGTFVDGQRIMEP--TAL 77
Query: 149 SPGSRITFGD 158
+P S + GD
Sbjct: 78 TPQSEVLLGD 87
>gi|410966238|ref|XP_003989641.1| PREDICTED: LOW QUALITY PROTEIN: forkhead-associated
domain-containing protein 1 [Felis catus]
Length = 1401
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEK 138
+ F + + TVGR E +D+V+ + HA I+ + DS ++ D +S NGTF++E
Sbjct: 9 EGFLVLNKSTTVGR-HEDSDLVLESPDIDNHHALIEYNEAEDSFVLQDFNSRNGTFVNEC 67
Query: 139 RLRSGVVAVASPGSRITFG 157
+++ V + PG + FG
Sbjct: 68 HIQNVAVKLL-PGDILRFG 85
>gi|425463813|ref|ZP_18843143.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9809]
gi|389829069|emb|CCI29842.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9809]
Length = 360
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
T+GR + D+VI +S HA +Q + GD L+ DL S NGTF++ +R+ +
Sbjct: 45 TIGRGKDN-DIVIKDYCISRNHAILQSTETGDFYLI-DLGSRNGTFVNGRRV--AIPVTI 100
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
RITFG T + +R + + + P E
Sbjct: 101 HDKDRITFGQTEVQFYRPTPTNIGKQPHNLE 131
>gi|296120510|ref|YP_003628288.1| ATP-binding region ATPase domain-containing protein [Planctomyces
limnophilus DSM 3776]
gi|296012850|gb|ADG66089.1| ATP-binding region ATPase domain protein [Planctomyces limnophilus
DSM 3776]
Length = 567
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVS 167
VS HA I+++GD ++ D +S+NGTF++ +++S + PG +I G T L +
Sbjct: 8 VSRTHAAIEREGDKFVLKDRNSSNGTFVNGAQVKSRTL---KPGDQIQIGRTILQFLQGD 64
Query: 168 KIDTVEAPSKTE 179
+ + A + E
Sbjct: 65 HVGSRRAADRVE 76
>gi|288921813|ref|ZP_06416030.1| serine/threonine protein kinase with FHA domain [Frankia sp. EUN1f]
gi|288346837|gb|EFC81149.1| serine/threonine protein kinase with FHA domain [Frankia sp. EUN1f]
Length = 1217
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++ V +GR PE D+V+ VS HA +++ G + DL S NGTF++ +R+
Sbjct: 554 MSTASVVIGRAPE-CDVVLGDPLVSRRHAELRRTGAEWKIVDLGSWNGTFVNGRRI 608
>gi|172036849|ref|YP_001803350.1| putative adenylate/guanylate cyclase [Cyanothece sp. ATCC 51142]
gi|171698303|gb|ACB51284.1| putative adenylate/guanylate cyclase [Cyanothece sp. ATCC 51142]
Length = 358
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ T+GR + D I +S HA +Q + GD LL+ DL S NGTF++++R+
Sbjct: 54 VGKNYWTIGRGKDN-DFSIGDHCISRNHAILQSTETGDFLLI-DLGSRNGTFVNDRRV-- 109
Query: 143 GVVAVASPGSRITFGDTHLAM 163
G+ G ++TFG T++A
Sbjct: 110 GIPVTLKSGDKVTFGKTNVAF 130
>gi|156742037|ref|YP_001432166.1| FHA domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156233365|gb|ABU58148.1| FHA domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 242
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----EKRLR 141
ST +T+GR D+V+ A VS HA+++ K +TDL STNGTF++ E+ LR
Sbjct: 165 STSMTIGR-GLNNDIVLEDARVSRNHAQLRYKSRRFWLTDLGSTNGTFVNGEPITERALR 223
Query: 142 SGVVAVASPGSRITF 156
G V ++ G +TF
Sbjct: 224 DGDV-ISLGGLELTF 237
>gi|148655809|ref|YP_001276014.1| forkhead-associated protein [Roseiflexus sp. RS-1]
gi|148567919|gb|ABQ90064.1| Forkhead-associated protein [Roseiflexus sp. RS-1]
Length = 894
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E++S VT+GRL + +D+V+ T+S HAR++ G VTDL S GTF+ RL
Sbjct: 46 EVSSDGVTIGRL-KGSDLVLDDPTISRNHARVEWDGRHARVTDLGSKLGTFLGAVRL 101
>gi|397905360|ref|ZP_10506216.1| FHA-domain-containing proteins [Caloramator australicus RC3]
gi|397161425|emb|CCJ33550.1| FHA-domain-containing proteins [Caloramator australicus RC3]
Length = 141
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D+VI VSG HA+I K D L + DL STNGT+++ +R+
Sbjct: 78 DLVIKDPYVSGNHAKIFVKDDRLFIEDLGSTNGTYVNGRRI 118
>gi|170077742|ref|YP_001734380.1| FHA domain-containing protein [Synechococcus sp. PCC 7002]
gi|169885411|gb|ACA99124.1| FHA domain protein [Synechococcus sp. PCC 7002]
Length = 438
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 89 EVTVGRLPERADMVIP--VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
E+ +GR P + P VS H I+ +G DL S NGTFI+ +RL+ +
Sbjct: 30 EILIGREPSCQIALNPNLYTVVSRRHVLIRPQGQGWEAVDLGSANGTFINGQRLQGSRIL 89
Query: 147 VASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSP 188
A G R+T GD PS + E + +G +P
Sbjct: 90 QA--GDRLTLGD--------------NGPSFSFELQSQGHNP 115
>gi|347533425|ref|YP_004840188.1| hypothetical protein RHOM_15750 [Roseburia hominis A2-183]
gi|345503573|gb|AEN98256.1| hypothetical protein RHOM_15750 [Roseburia hominis A2-183]
Length = 411
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
D + I ST GR IP ATVS HA+I KKG + DL+S+NGT
Sbjct: 336 DNYVIGSTAECDGR--------IPSATVSRRHAKISKKGAVFFIEDLNSSNGT 380
>gi|17228238|ref|NP_484786.1| adenylate cyclase [Nostoc sp. PCC 7120]
gi|1754644|dbj|BAA14001.1| adenylate cyclase [Anabaena sp.]
gi|17130088|dbj|BAB72700.1| adenylate cyclase [Nostoc sp. PCC 7120]
Length = 546
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDE 137
T+GRLPE ++ +P A VS HA++ KK D ++ DL S NGT +++
Sbjct: 25 TIGRLPE-CNLYLPFAGVSRKHAQLVKKADGKWIIEDLGSKNGTQVNQ 71
>gi|428777996|ref|YP_007169783.1| FHA domain-containing protein [Halothece sp. PCC 7418]
gi|428692275|gb|AFZ45569.1| FHA domain containing protein [Halothece sp. PCC 7418]
Length = 900
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 83 FEIASTEVTV-GRLPERADMVIPV--ATVSGLHARIQ--KKGDS--LLVTDLDSTNGTFI 135
+ ++S EVTV GR PE + P+ TVS HA I+ KKG + D +TNGT +
Sbjct: 408 YFLSSEEVTVIGRSPECQIALNPMEYVTVSRRHAEIKYIKKGQEAGWQIRDTGTTNGTLV 467
Query: 136 DEKRLRSGVVAVASPGSRITFGDTHLAM-FRVSKI-DTVEAPSKTEESEEKGDSPP 189
+++R+ G ++ S G R+T G + F S + TV P T E EEK DS P
Sbjct: 468 NDERIE-GWYSLKS-GDRVTLGYKGPELIFEHSALPTTVFIPVSTPE-EEKSDSQP 520
>gi|296127899|ref|YP_003635149.1| FHA domain-containing protein [Cellulomonas flavigena DSM 20109]
gi|296019714|gb|ADG72950.1| FHA domain containing protein [Cellulomonas flavigena DSM 20109]
Length = 169
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ ++ V VGR P +V+ S HARI +G+ V DL STNGTF+ E R+
Sbjct: 90 LPLGTSAVLVGRAPS-CTLVLDDDYSSSRHARIFPQGEQWFVEDLGSTNGTFVGETRV 146
>gi|410729417|ref|ZP_11367495.1| FHA domain-containing protein [Clostridium sp. Maddingley MBC34-26]
gi|410595718|gb|EKQ50413.1| FHA domain-containing protein [Clostridium sp. Maddingley MBC34-26]
Length = 147
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+++T+GR + +V+ VSG HA+I + DSL + DL+STNGT+++ ++ +
Sbjct: 73 SDLTIGR-KDGNSIVLSDPHVSGNHAKIIVRNDSLYIEDLNSTNGTYVNGNKINN 126
>gi|159107520|ref|XP_001704039.1| Hypothetical protein GL50803_14347 [Giardia lamblia ATCC 50803]
gi|157432087|gb|EDO76365.1| hypothetical protein GL50803_14347 [Giardia lamblia ATCC 50803]
Length = 422
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+ VGR + D+ + ++SG HA+I +G + V DL+S NGT+I++ ++++ V V
Sbjct: 21 IVVGRSAD-CDISLDSKSISGHHAKILLEGPRNSAVIDLNSRNGTYINDIKIKNDSVPVY 79
Query: 149 SPGSRITFGDTHLAMFRV 166
PG + FG T L FR+
Sbjct: 80 -PGDTLRFG-TDLPPFRL 95
>gi|428312956|ref|YP_007123933.1| FHA domain-containing protein [Microcoleus sp. PCC 7113]
gi|428254568|gb|AFZ20527.1| FHA domain-containing protein [Microcoleus sp. PCC 7113]
Length = 254
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 107 TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG-DTHLA-MF 164
VS +HA I +G++ L+ DL S NGT++++ LR G RI G D + +F
Sbjct: 55 VVSRIHAHILVQGNTYLIEDLGSANGTYLNDSLLRPLTQHQLKLGDRIDLGKDNQVTFLF 114
Query: 165 RVSK-IDTVEAPSKTEESEE 183
++SK I V + ++ EE+E
Sbjct: 115 QLSKTIPPVTSKAEKEEAEH 134
>gi|383453549|ref|YP_005367538.1| FHA domain/GGDEF domain-containing protein [Corallococcus
coralloides DSM 2259]
gi|380734976|gb|AFE10978.1| FHA domain/GGDEF domain-containing protein [Corallococcus
coralloides DSM 2259]
Length = 293
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR--- 139
+ + TE T+GR + +V+ + VS HARI + V DL STNGT+++++
Sbjct: 38 YVLEETEFTIGR-DQHNHIVVDLDNVSRRHARIWTRQGKTFVEDLQSTNGTYLNDREVLQ 96
Query: 140 ---LRSGVVAVASPGSRITFGD 158
LRSG + V GS F D
Sbjct: 97 AQPLRSGDL-VKVGGSIFKFLD 117
>gi|67923487|ref|ZP_00516963.1| Forkhead-associated [Crocosphaera watsonii WH 8501]
gi|67854675|gb|EAM49958.1| Forkhead-associated [Crocosphaera watsonii WH 8501]
Length = 222
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 79 MPDAFEIASTEVTVGRLPERADMV-IPVA-TVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
MP EI ++P D+ +P A VS +HA I+ + + D+ S+NGT+I+
Sbjct: 130 MPQGLEIIHIGKPNEQIPPDLDVSGLPDADVVSRIHADIRNEAGIFYIEDVGSSNGTYIN 189
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMF 164
L G PG RI+ G L F
Sbjct: 190 YNALSPGNRHRLHPGDRISLGKGDLVTF 217
>gi|338531041|ref|YP_004664375.1| sigma-54 dependent transcription regulator [Myxococcus fulvus HW-1]
gi|337257137|gb|AEI63297.1| sigma-54 dependent transcription regulator [Myxococcus fulvus HW-1]
Length = 449
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 107 TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRV 166
T S H IQ L+ DL STNGTF+D +R+ A SPGS+I G + L +
Sbjct: 56 TASRHHFEIQFTERGYLLVDLGSTNGTFLDGRRIER---AYLSPGSQIRAGSSVLTFAPL 112
Query: 167 SKIDTVEAPSKTEESEEKGDS 187
+ T+E + E E G S
Sbjct: 113 DEEVTIEPDREGELCEMVGQS 133
>gi|301772114|ref|XP_002921478.1| PREDICTED: LOW QUALITY PROTEIN: forkhead-associated
domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1405
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEK 138
+ F + + TVGR E +D+V+ A + HA I+ + DS ++ D +S NGTF++E
Sbjct: 9 EGFFVLNKSTTVGR-HEDSDLVLESADIDNHHALIEYNEAEDSFVLQDFNSRNGTFVNEC 67
Query: 139 RLRSGVVAVASPGSRITFG 157
+++ V + + G + FG
Sbjct: 68 HIQNVAVKLLA-GDILRFG 85
>gi|339484859|ref|YP_004696645.1| Forkhead-associated protein [Nitrosomonas sp. Is79A3]
gi|338807004|gb|AEJ03246.1| Forkhead-associated protein [Nitrosomonas sp. Is79A3]
Length = 575
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 15/76 (19%)
Query: 74 GFKVPMPDAFEIASTEVTVGRL--------PERADMVIPVATVSGLHARIQKKG-DSLLV 124
G K ++FE+ +T GR PE+ D+V S H +I +G D+ L+
Sbjct: 11 GTKANQTESFELPFDAITFGRNTNCQVNYDPEKEDLV------SRNHLKITPQGEDTFLL 64
Query: 125 TDLDSTNGTFIDEKRL 140
TDL+S+NGTF+++K++
Sbjct: 65 TDLNSSNGTFVNDKQV 80
>gi|262200074|ref|YP_003271282.1| forkhead-associated protein [Gordonia bronchialis DSM 43247]
gi|262083421|gb|ACY19389.1| Forkhead-associated protein [Gordonia bronchialis DSM 43247]
Length = 153
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +++G P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 69 LANTRISLGNQPVLLGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRT 128
Query: 139 RLRSGV-VAVASP 150
++ + V V +++P
Sbjct: 129 KVTTPVKVPISTP 141
>gi|196233184|ref|ZP_03132031.1| FHA domain containing protein [Chthoniobacter flavus Ellin428]
gi|196222828|gb|EDY17351.1| FHA domain containing protein [Chthoniobacter flavus Ellin428]
Length = 253
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ I +GR + D+V+ +VS HA + K+GD ++ DL+++NG FI KR+
Sbjct: 169 YPITKAATRIGR-KQDNDIVMKNNSVSSHHAELIKRGDKFIIADLEASNGVFIGGKRV 225
>gi|428222286|ref|YP_007106456.1| membrane carboxypeptidase [Synechococcus sp. PCC 7502]
gi|427995626|gb|AFY74321.1| membrane carboxypeptidase (penicillin-binding protein)
[Synechococcus sp. PCC 7502]
Length = 729
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK-GDSLLVTDLDSTNGTFIDEK 138
P+ +++ +GR + +VI VS +HA I ++ ++ +++D DSTNG + +
Sbjct: 38 PEVYDLVGDRYVLGRSSGKCQIVIQTPVVSQVHAEITRRNANNFVISDQDSTNGIYRGHQ 97
Query: 139 RLRS 142
RL+S
Sbjct: 98 RLKS 101
>gi|395333224|gb|EJF65602.1| Pkinase-domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 677
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 83 FEIASTEVTVGRLPE--RADMVIPVATVSGLHARIQKKGD-----SLLVTDLDSTNGTFI 135
F+ T +GR E + D+++P +S H I+ GD ++ VTD S+NGTFI
Sbjct: 46 FQKIKTSYRIGRNREEHKNDIILPGMKISNFHCIIEWDGDETPKSAIKVTDA-SSNGTFI 104
Query: 136 DEKRLRSGVVAVASPGSRITFGDT 159
+ +R+ G V + G+ I FG +
Sbjct: 105 NGERIGKGKVKILRDGNEIAFGTS 128
>gi|170690704|ref|ZP_02881870.1| FHA domain containing protein [Burkholderia graminis C4D1M]
gi|170143953|gb|EDT12115.1| FHA domain containing protein [Burkholderia graminis C4D1M]
Length = 875
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 105 VATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
V +S HA I KG L V DL STNGTF+ R+ + +A G + FG H ++
Sbjct: 180 VNYISRRHAHIFLKGAELYVEDLGSTNGTFVGGIRVGESALPLAD-GDVVAFGGDHF-VY 237
Query: 165 RVSKIDTVEAPSKTE 179
RV T++ P + E
Sbjct: 238 RV----TLQKPPEVE 248
>gi|298490669|ref|YP_003720846.1| FHA domain-containing protein ['Nostoc azollae' 0708]
gi|298232587|gb|ADI63723.1| FHA domain containing protein ['Nostoc azollae' 0708]
Length = 295
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +H+ I+ +GD+ + D+ S+NGT+I+ L G PG RI+ G L F
Sbjct: 234 VSRIHSDIRVEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 290
>gi|296130040|ref|YP_003637290.1| FHA domain-containing protein [Cellulomonas flavigena DSM 20109]
gi|296021855|gb|ADG75091.1| FHA domain containing protein [Cellulomonas flavigena DSM 20109]
Length = 585
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 94 RLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE-----KRLRSGVVAVA 148
LP + P +S HA ++ +GD ++VTDLDSTNG + +RL G +V
Sbjct: 505 ELPRLVTVPSPNQDISRTHAEVRVEGDHVIVTDLDSTNGVHVSRPGEGVRRLHPGEPSVV 564
Query: 149 SPGSRITFGD 158
P + GD
Sbjct: 565 GPDEVVDLGD 574
>gi|162450735|ref|YP_001613102.1| hypothetical protein sce2463 [Sorangium cellulosum So ce56]
gi|161161317|emb|CAN92622.1| hypothetical protein with FHA domain [Sorangium cellulosum So ce56]
Length = 326
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
E+ VGR + DMV+ VS HARI S+++ DL STNGTF++ ++++ +
Sbjct: 52 EIVVGRSSD-LDMVLVEDMVSRRHARIACTEQSIVIEDLGSTNGTFVNGEKIKKTTL--- 107
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSSAKS 195
G R+ G + + +V D P++ ++ D P L S ++
Sbjct: 108 KEGDRVLIGTS---ILKVVSTDPGAPPAR-----KRMDEPSLRSGQT 146
>gi|336319167|ref|YP_004599135.1| FHA domain containing protein [[Cellvibrio] gilvus ATCC 13127]
gi|336102748|gb|AEI10567.1| FHA domain containing protein [[Cellvibrio] gilvus ATCC 13127]
Length = 171
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ + V +GR P +V+ S HARI +G V DL STNGTF+ E+R+ V
Sbjct: 94 LTQSAVLIGRAPG-CTLVLDDDYSSSRHARIYPQGGDWYVEDLGSTNGTFVGEQRVEQPV 152
Query: 145 VAVASPGSRITFG 157
+PGS + G
Sbjct: 153 --RLAPGSTVRVG 163
>gi|158334907|ref|YP_001516079.1| 1A family penicillin-binding protein [Acaryochloris marina
MBIC11017]
gi|158305148|gb|ABW26765.1| penicillin-binding protein, 1A family [Acaryochloris marina
MBIC11017]
Length = 747
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD--SLLVTDLDSTNGTFIDE 137
P ++ + S +GR D+VI VS +HA IQ+ G + L+ D STNG F +
Sbjct: 52 PQSYPLISDRYIIGRSARTCDIVIRNPIVSQVHASIQRDGKRRTFLIRDEQSTNGIFRRK 111
Query: 138 KRLRS 142
+R+ S
Sbjct: 112 RRVDS 116
>gi|86157276|ref|YP_464061.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773787|gb|ABC80624.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 150
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
R L V D G + P+ D +VT GR E +VI S HARI
Sbjct: 52 RAALVVVHSADAGEQGRRYPLGD------EDVTFGR-EEGNTVVIGSDQASRRHARIFVS 104
Query: 119 GDSLLVTDLDSTNGTFIDEKR-----LRSG-VVAVAS 149
G + ++ DLDSTNGTF++ K+ LR G V+ VAS
Sbjct: 105 GGAHVLVDLDSTNGTFLNSKQVKEQTLRHGDVIRVAS 141
>gi|359462286|ref|ZP_09250849.1| 1A family penicillin-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 732
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD--SLLVTDLDSTNGTFIDE 137
P ++ + S +GR D+VI VS +HA IQ+ G + L+ D STNG F +
Sbjct: 37 PQSYPLISDRYIIGRSARTCDIVIRNPIVSQVHASIQRDGKHRTFLIRDEQSTNGIFRRK 96
Query: 138 KRLRS 142
+R+ S
Sbjct: 97 RRVDS 101
>gi|281209603|gb|EFA83771.1| protein kinase 1 [Polysphondylium pallidum PN500]
Length = 518
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 42 ADSSTTTTTTSTDVAAERWLLQPVGDGDT-SHIGFKVPMPDAFEIASTEVTVGRLPERAD 100
++++T +TT D +LQ +GDG T + P+ + E+ V GR P
Sbjct: 18 VNNNSTDSTTVNDTPD---VLQ-IGDGATWGRLVSLNPIYPSIELRQNVVIFGRTPALCQ 73
Query: 101 MVIPVATVSGLHARIQK----KGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF 156
+ TVSG HA+I + K + + + D STNGTFI+++ + G + S G I+
Sbjct: 74 VTFNTPTVSGKHAKIHRDPTAKQNIVFLEDT-STNGTFINKELIGKGSKILVSNGCEISI 132
>gi|259508270|ref|ZP_05751170.1| secreted protein [Corynebacterium efficiens YS-314]
gi|259164142|gb|EEW48696.1| secreted protein [Corynebacterium efficiens YS-314]
Length = 153
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ E+A ++ +GR P+ V+ SG HARI K+G V DLDS NGTF+ R+
Sbjct: 74 SMEVAD-DMVIGRSPD-CTFVVGDDYASGRHARIFKRGAEWFVEDLDSRNGTFVSGVRI 130
>gi|311739310|ref|ZP_07713146.1| FHA domain protein [Corynebacterium pseudogenitalium ATCC 33035]
gi|311305608|gb|EFQ81675.1| FHA domain protein [Corynebacterium pseudogenitalium ATCC 33035]
Length = 277
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + +GR AD+ +P VS HA I G ++ DL STNGT ++E + +
Sbjct: 191 YHVQEGSNIIGR-SNDADLRLPDTGVSRQHAEITWNGQDAVLVDLQSTNGTTVNETPIDN 249
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDT 171
++A G IT G +H+ + R++ +D+
Sbjct: 250 WLLA---DGDVITMGHSHIEV-RITGLDS 274
>gi|25026594|ref|NP_736648.1| hypothetical protein CE0038 [Corynebacterium efficiens YS-314]
gi|23491873|dbj|BAC16848.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 155
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ E+A ++ +GR P+ V+ SG HARI K+G V DLDS NGTF+ R+
Sbjct: 76 SMEVAD-DMVIGRSPD-CTFVVGDDYASGRHARIFKRGAEWFVEDLDSRNGTFVSGVRI 132
>gi|325110895|ref|YP_004271963.1| diguanylate phosphodiesterase [Planctomyces brasiliensis DSM 5305]
gi|324971163|gb|ADY61941.1| diguanylate phosphodiesterase [Planctomyces brasiliensis DSM 5305]
Length = 390
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I + T+GR P D I VS LHA + + +L+ DL STNGTF++ RL
Sbjct: 35 IHRSPFTIGRNPG-CDCPINSRKVSKLHAEVIVASEVVLIKDLGSTNGTFVNGYRLHD-- 91
Query: 145 VAVASPGSRITFGDTHLAMFR 165
+ G + F D + R
Sbjct: 92 ITPVGAGDLVQFADMEFQIER 112
>gi|255325710|ref|ZP_05366806.1| FHA domain protein [Corynebacterium tuberculostearicum SK141]
gi|255297204|gb|EET76525.1| FHA domain protein [Corynebacterium tuberculostearicum SK141]
Length = 277
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + +GR AD+ +P VS HA I G ++ DL STNGT ++E + +
Sbjct: 191 YHVQEGSNIIGR-SNDADLRLPDTGVSRQHAEITWNGQDAVLVDLQSTNGTTVNETPIDN 249
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDT 171
++A G IT G +H+ + R++ +D+
Sbjct: 250 WLLA---DGDVITMGHSHIEV-RITGLDS 274
>gi|197120877|ref|YP_002132828.1| diguanylate cyclase [Anaeromyxobacter sp. K]
gi|220915577|ref|YP_002490881.1| diguanylate cyclase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170726|gb|ACG71699.1| diguanylate cyclase [Anaeromyxobacter sp. K]
gi|219953431|gb|ACL63815.1| diguanylate cyclase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 326
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 79 MPDAFEIAS-TEVTVGRLPERADMVIPVA--TVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
+ D + +AS E+ +GR R D +P+ VS HA I+ +G+ L+ DL S NGT++
Sbjct: 36 LGDIYPLASDRELVIGR---RDDCDLPIHDDGVSRRHAAIRVEGEGALLRDLGSANGTYV 92
Query: 136 DEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
D R G V +A G R++ G + F + D +EA + + +E
Sbjct: 93 DGARA-EGEVRLAD-GGRVSLGGATVLKF--AWADELEARWQMKLAE 135
>gi|6681688|dbj|BAA88841.1| zea-xanthin epoxidase [Gentiana lutea]
Length = 663
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS-----PGSRI 154
D VI + VS HARI+ K + V DL S GT+I + R V S P I
Sbjct: 568 DAVISSSQVSKQHARIEYKDGAFFVVDLQSEYGTYITDNEGRRYRVTPNSPTRFHPSDII 627
Query: 155 TFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPLSSA 193
FG A FRV ++ K E KG L +A
Sbjct: 628 EFGSDKKATFRVK---VMKNTPKIAEKTSKGSEEALQAA 663
>gi|388256746|ref|ZP_10133927.1| FHA domain protein [Cellvibrio sp. BR]
gi|387940446|gb|EIK46996.1| FHA domain protein [Cellvibrio sp. BR]
Length = 239
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 95 LPER---------ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
LPER D+VIP +S H I +G+ L + DL S NGTF++E R+ +
Sbjct: 88 LPERSMVIGRGNQCDIVIPGTHLSRRHTEISIEGNHLRIKDLGSANGTFLNELRIDN--- 144
Query: 146 AVASPGSRITF 156
A A+ G R+
Sbjct: 145 ATANNGDRLRL 155
>gi|444912198|ref|ZP_21232363.1| hypothetical protein D187_04116 [Cystobacter fuscus DSM 2262]
gi|444717106|gb|ELW57941.1| hypothetical protein D187_04116 [Cystobacter fuscus DSM 2262]
Length = 459
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
+D+V+ TVS H +++ +L+ DL S NGTF+D R+ + + G ++ G
Sbjct: 56 SDLVLSDQTVSRRHLELERSSQGILLRDLGSRNGTFLDGHRV---IQVLLQHGDKVQLGK 112
Query: 159 THLAMFRVSKIDTVE 173
T L + + S+ VE
Sbjct: 113 TKLVIKQESRATEVE 127
>gi|256389335|ref|YP_003110899.1| FHA domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256355561|gb|ACU69058.1| FHA domain containing protein [Catenulispora acidiphila DSM 44928]
Length = 189
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ +GR+PE D+ + TVS HA ++ + + DL STNGT ++ R+ +
Sbjct: 116 LRIGRMPE-CDLQLFDTTVSRYHAEFRRSQNGWFLVDLGSTNGTRVNGWRITA--PTAVQ 172
Query: 150 PGSRITFGDTHLAM 163
PG ++FG ++
Sbjct: 173 PGDEVSFGSVVFSL 186
>gi|162455409|ref|YP_001617776.1| sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
gi|161165991|emb|CAN97296.1| Sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
Length = 610
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
VGR E +D+ +P T+S HAR +LV DL STNGT+I R+ VA+ G
Sbjct: 56 VGR-GEPSDLCLPDRTLSREHARFSLNEGRILVEDLGSTNGTWIAGTRIERAEVAL---G 111
Query: 152 SRITFGDTHLAMFRVSKIDTVEAPSKTEES 181
+ G + R+ + T P + EES
Sbjct: 112 GEVMLGTV---VARIVVLGTATLPLEGEES 138
>gi|148657758|ref|YP_001277963.1| winged helix family two component response transcriptional
regulator [Roseiflexus sp. RS-1]
gi|148569868|gb|ABQ92013.1| putative two component transcriptional regulator, winged helix
family [Roseiflexus sp. RS-1]
Length = 220
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+T+GR P D+VI S HAR+++ L+ DLDSTNGT+++ +R+ GV + +
Sbjct: 28 LTLGRDPAN-DIVIDHPLASRRHARLERDESGYLIRDLDSTNGTYVNGERI-EGVQTLHN 85
Query: 150 PGSRITFGDTHLAM 163
RI D +
Sbjct: 86 -QDRIWIADAEIVF 98
>gi|443474985|ref|ZP_21064949.1| FHA modulated glycosyl transferase/transpeptidase [Pseudanabaena
biceps PCC 7429]
gi|443020242|gb|ELS34225.1| FHA modulated glycosyl transferase/transpeptidase [Pseudanabaena
biceps PCC 7429]
Length = 756
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHA-----RIQKKGDSLLVTDLDSTNGTF 134
P+ +++ +GR + D+V+ VS +HA R QKK ++ D DSTNG +
Sbjct: 59 PEIYDLVGDRYILGRSTGKCDIVVQTPLVSQVHAQLVRDRTQKK-SQFILQDRDSTNGIY 117
Query: 135 IDEKRLRS 142
+++RL+S
Sbjct: 118 RNKQRLKS 125
>gi|326383938|ref|ZP_08205622.1| Forkhead-associated protein [Gordonia neofelifaecis NRRL B-59395]
gi|326197397|gb|EGD54587.1| Forkhead-associated protein [Gordonia neofelifaecis NRRL B-59395]
Length = 155
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 82 AFEIASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
A +A+T +T+G P RAD +V+ S HAR+ +GD V DL STNGT++
Sbjct: 68 AGALANTRITLGTQPVLIGRADDSTLVLTDDYASERHARLSPRGDDWYVEDLGSTNGTYL 127
Query: 136 DEKRLRSGVVA 146
D ++ + V A
Sbjct: 128 DRSKVTTAVRA 138
>gi|400536183|ref|ZP_10799718.1| transcriptional regulator [Mycobacterium colombiense CECT 3035]
gi|400330265|gb|EJO87763.1| transcriptional regulator [Mycobacterium colombiense CECT 3035]
Length = 379
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GRL + D+V+ VS HA + G ++ DL S+NG + +R+RS A
Sbjct: 300 TIGRLSDN-DIVLDSPKVSRHHAVVVDTGTGYIIDDLRSSNGVHVQHQRIRSA--ATLQD 356
Query: 151 GSRITFGDTHLAMFRVS 167
G R+ GD H F+V+
Sbjct: 357 GDRVRIGD-HEFTFQVA 372
>gi|416397678|ref|ZP_11686681.1| FHA domain containing protein, partial [Crocosphaera watsonii WH
0003]
gi|357262706|gb|EHJ11809.1| FHA domain containing protein, partial [Crocosphaera watsonii WH
0003]
Length = 120
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 79 MPDAFEIASTEVTVGRLPERADMV-IPVA-TVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
MP EI ++P D+ +P A VS +HA I+ + + D+ S+NGT+I+
Sbjct: 28 MPQGLEIIHIGKPNEQIPPDLDVSGLPDADVVSRIHADIRNEAGIFYIEDVGSSNGTYIN 87
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMF 164
L G PG RI+ G L F
Sbjct: 88 YNALSPGNRHRLRPGDRISLGKGDLVTF 115
>gi|325182253|emb|CCA16707.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325187273|emb|CCA21813.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 434
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGT 133
I ST VT+GR A + A++SG H GD +TDL+STNGT
Sbjct: 333 IGSTPVTLGRKSSNALSIPEDASISGRHCVFSHLGDGFYITDLNSTNGT 381
>gi|145495334|ref|XP_001433660.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400779|emb|CAK66263.1| unnamed protein product [Paramecium tetraurelia]
Length = 593
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+ EI+ T+GR ++ D V VS +H I+ K VTDL S+NGT+I+EK++
Sbjct: 19 SIEISKPIFTLGR-DQKNDKVFSDIKVSSIHLTIEYKDSQFTVTDL-SSNGTYINEKKIG 76
Query: 142 SGVVAVASPGSRI 154
G G +I
Sbjct: 77 KGNTVSILNGDKI 89
>gi|119482536|ref|XP_001261296.1| serine/threonine-protein kinase chk2 (cds1) [Neosartorya fischeri
NRRL 181]
gi|119409451|gb|EAW19399.1| serine/threonine-protein kinase chk2 (cds1) [Neosartorya fischeri
NRRL 181]
Length = 661
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
VGR PE D+VI + T+S H I K GDS+ + + S+NGTF+++ +
Sbjct: 182 VGRHPE-CDLVINIPTISNRHFLIFSENKNGDSVAIVEDLSSNGTFVNDAIIGRNKYREL 240
Query: 149 SPGSRITFGDTHLAMFRVSK 168
G IT D +FR +
Sbjct: 241 EDGDEITILDEARFVFRYPR 260
>gi|377567984|ref|ZP_09797184.1| hypothetical protein GOTRE_014_00440 [Gordonia terrae NBRC 100016]
gi|377534825|dbj|GAB42349.1| hypothetical protein GOTRE_014_00440 [Gordonia terrae NBRC 100016]
Length = 852
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P+ D+V+ S HA++ +G +L++ DL S NGTF++ +R+ S A + G
Sbjct: 218 IGRTPDN-DIVVSDVLASRHHAQVSSRGSALVIEDLGSVNGTFVNGRRVSS---APLTDG 273
Query: 152 SRITFGDT 159
+T G++
Sbjct: 274 DVVTIGNS 281
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
S VT+GR P+ D+VI VS H I+ +G + + D+ STNG F++ +R+ +V
Sbjct: 18 GSRRVTLGREPDN-DIVINHPMVSRRHLAIEWRGAAWCLVDIGSTNGFFVNGQRMAEFMV 76
Query: 146 A 146
A
Sbjct: 77 A 77
>gi|411118240|ref|ZP_11390621.1| FHA domain-containing protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410711964|gb|EKQ69470.1| FHA domain-containing protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 257
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITF--GDTHLAMFR 165
VS +HA I+ +GD+ + D+ S+NGT+I+ L G PG RI GD +F+
Sbjct: 196 VSRIHADIRLEGDAYYIEDVGSSNGTYINNLPLVRGNRHRLRPGDRIALGKGDKVTFLFQ 255
Query: 166 VS 167
+S
Sbjct: 256 LS 257
>gi|403509373|ref|YP_006641011.1| FHA domain protein [Nocardiopsis alba ATCC BAA-2165]
gi|402800387|gb|AFR07797.1| FHA domain protein [Nocardiopsis alba ATCC BAA-2165]
Length = 252
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 59 RWLLQPVG---DGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI 115
R L+ P G +G+ + G M +FE+ + +GR + D+ + VS H I
Sbjct: 150 RLLISPGGATAEGNIASQG----MQQSFELTTPVTLLGRGTD-CDLRLVDNGVSRHHVEI 204
Query: 116 QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFR 165
+ GD +++ D STNGTF++ +++R A G+RI+ G T + R
Sbjct: 205 RVDGDEVILEDKGSTNGTFVNGQQVRQ---ARLVDGTRISLGRTTMTFRR 251
>gi|397670271|ref|YP_006511806.1| oxoglutarate dehydrogenase inhibitor [Propionibacterium propionicum
F0230a]
gi|395141057|gb|AFN45164.1| oxoglutarate dehydrogenase inhibitor [Propionibacterium propionicum
F0230a]
Length = 149
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
F I S T+GR PE +D+ + TVS HA++ + G L++ DL S NGT+++
Sbjct: 64 FLIDSDVTTLGRHPE-SDIFLDDVTVSRHHAKLVRAGGQLMLEDLGSLNGTYVN 116
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 50 TTSTDVAAERW-LLQPV-----GDGDTSHIGFKVPMPDA-FEIASTEVTVGRLPERADMV 102
T T + +E W +L P+ DG T + P+ A F + ++ V VGR P+ DMV
Sbjct: 4332 NTRTSIPSEAWGVLYPLPVLQDTDGSTPD---ETPLNTAPFPLVTSVVRVGRAPDSCDMV 4388
Query: 103 IPVATVSGLHARIQK----KGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRIT 155
+ +VSG H +++ G+ S NG+ ++ R+ G SPGSRI+
Sbjct: 4389 VNDRSVSGRHFHLRRIHGNDGEQCFELQDFSKNGSIVNGVRVH-GTSTRISPGSRIS 4444
>gi|238059635|ref|ZP_04604344.1| hypothetical protein MCAG_00601 [Micromonospora sp. ATCC 39149]
gi|237881446|gb|EEP70274.1| hypothetical protein MCAG_00601 [Micromonospora sp. ATCC 39149]
Length = 199
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
Query: 47 TTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVA 106
TT S DVAA R L P G P+P + EV +GR + ++ + +
Sbjct: 88 TTRDASPDVAAFR-LDFPFG-----------PVP----VGRAEVRIGRADDLGEIALRLG 131
Query: 107 ---TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
VS HA + + D L V DL STNGT+++++RL
Sbjct: 132 AHGNVSRQHALVWVEHDELYVQDLSSTNGTYVNDRRL 168
>gi|220916013|ref|YP_002491317.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953867|gb|ACL64251.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 122
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 59 RWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKK 118
R L V GD G + P+ D +VT+GR + +VI S HARI
Sbjct: 24 RAALVVVHSGDAGRQGTRYPLGD------EDVTLGR-DDGNTVVIGSDQASRRHARIFVS 76
Query: 119 GDSLLVTDLDSTNGTFIDEKRLR 141
G ++ DLDSTNGTF++ K+++
Sbjct: 77 GGVHVLVDLDSTNGTFLNSKQVK 99
>gi|441516385|ref|ZP_20998135.1| hypothetical protein GOHSU_02_02450 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441456971|dbj|GAC56096.1| hypothetical protein GOHSU_02_02450 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 858
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
T+GR P+ D+V+ S HAR+ G +L++ DL S NGTF++ R+
Sbjct: 217 TIGRTPDN-DIVVADVLASRRHARLSSVGGALVIEDLGSVNGTFVNGHRI 265
>gi|29348183|ref|NP_811686.1| adenylate cyclase [Bacteroides thetaiotaomicron VPI-5482]
gi|29340086|gb|AAO77880.1| putative adenylate cyclase [Bacteroides thetaiotaomicron VPI-5482]
Length = 493
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLL-VTDLDSTNGTFIDEKRLRSGVVAVA 148
+ VGR P D+V+ VS HA I ++ + DL+S NGTF++ R+++ V
Sbjct: 4 IKVGRNPVN-DVVVSDPGVSSQHAVITVSSSGIVCIKDLNSKNGTFVNSMRIQNQV--QL 60
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDS--PP 189
S G ++ G+T + R+ ++ P KT S KG PP
Sbjct: 61 SNGDKVKLGNTSIDWNRI-----IQQPEKTVVSAGKGQVIIPP 98
>gi|392550911|ref|ZP_10298048.1| FHA domain-containing protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 307
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR PE A +I +VS H I+ + + + D+ S NGT+I+ KR+ +
Sbjct: 21 IGRHPETAHTLIRETSVSRSHCLIEWQQGNWFLQDI-SANGTYINGKRVAKNIKHDLKVN 79
Query: 152 SRITFGDTHLAMFRVSKID 170
+ FGD+ ++VS ++
Sbjct: 80 DVVQFGDSESVKWQVSSLE 98
>gi|308175845|ref|YP_003915251.1| FHA domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307743308|emb|CBT74280.1| FHA domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 159
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 109 SGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
SG HAR+ +G + DL STNGTF+ + +L PG RI G T + +
Sbjct: 105 SGRHARLFPQGSRWFIEDLGSTNGTFVGDSQLSRA--QAVEPGQRIRIGKTVMEL 157
>gi|430744372|ref|YP_007203501.1| serine phosphatase RsbU, regulator of sigma subunit [Singulisphaera
acidiphila DSM 18658]
gi|430016092|gb|AGA27806.1| serine phosphatase RsbU, regulator of sigma subunit [Singulisphaera
acidiphila DSM 18658]
Length = 568
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 78 PMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE 137
P E+ +GR PE +V+ VS HA +++ G+ + DL S N T ++
Sbjct: 11 PAGQIIELKGDVTVIGRSPE-CHIVLDPNGVSRRHAEVRRVGEKFFLADLHSRNLTKVNN 69
Query: 138 KRLRSGVVAVASPGSRITFGDTHLAMF 164
R+ G PG RI D F
Sbjct: 70 SRVEPGKDHPLQPGDRINICDVEFLYF 96
>gi|262198833|ref|YP_003270042.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262082180|gb|ACY18149.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 258
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----EKRLRSGVVAVASPGSR 153
D+ I A VSGLH I+++G L+ D +STNGT ++ E LR PG
Sbjct: 131 CDIRIDDAAVSGLHCVIERRGAYTLLRDCESTNGTQLNRAMSYEAELR--------PGDL 182
Query: 154 ITFGDTHLAMF 164
+T G T+L +
Sbjct: 183 LTVGRTNLVAY 193
>gi|218246298|ref|YP_002371669.1| FHA domain-containing protein [Cyanothece sp. PCC 8801]
gi|257059345|ref|YP_003137233.1| FHA domain-containing protein [Cyanothece sp. PCC 8802]
gi|218166776|gb|ACK65513.1| FHA domain containing protein [Cyanothece sp. PCC 8801]
gi|256589511|gb|ACV00398.1| FHA domain containing protein [Cyanothece sp. PCC 8802]
Length = 237
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 79 MPDAFEIASTEVTVGRLPERADMV-IPVA-TVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
+P E+ ++P D+ P A VS +HA I+ +GD + D+ S+NGT+I+
Sbjct: 145 LPQGLEVIHIGKPNPKIPPDIDISGFPHADIVSRIHADIRVEGDGFYIEDVGSSNGTYIN 204
Query: 137 EKRLRSGVVAVASPGSRITFG 157
K L G G RI+ G
Sbjct: 205 HKSLPHGNRHRLRSGDRISLG 225
>gi|428217262|ref|YP_007101727.1| FHA modulated glycosyl transferase/transpeptidase [Pseudanabaena
sp. PCC 7367]
gi|427989044|gb|AFY69299.1| FHA modulated glycosyl transferase/transpeptidase [Pseudanabaena
sp. PCC 7367]
Length = 766
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 78 PMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARI-----QKKGDSLLVTDLDSTNG 132
P P ++ + +GR R+D+V+ VS +HA++ QKK ++ D STNG
Sbjct: 67 PKPHSYNLVGDRYIIGRSSSRSDIVVKTPLVSQVHAKLVRDSSQKKA-KFVIKDQGSTNG 125
Query: 133 TFIDEKRLRS 142
+ +RL+S
Sbjct: 126 IYRKRQRLKS 135
>gi|453381372|dbj|GAC84035.1| hypothetical protein GP2_017_00640 [Gordonia paraffinivorans NBRC
108238]
Length = 153
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T + +G+ P RAD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 69 LANTRIGLGQQPVLIGRADDSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRS 128
Query: 139 RLRSGV 144
++ + V
Sbjct: 129 KVTTAV 134
>gi|374997151|ref|YP_004972650.1| FHA domain-containing protein [Desulfosporosinus orientis DSM 765]
gi|357215517|gb|AET70135.1| FHA domain-containing protein [Desulfosporosinus orientis DSM 765]
Length = 272
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS-LLVTDLDSTNGTFIDEKR 139
++F + E+ +GR + D V+ VS H +I G+ + D+ STNGT ++ +R
Sbjct: 187 ESFSLEDEEMIIGRHGQ-CDFVVHDPEVSRRHLKIAPGGEKGWWLDDMGSTNGTLVNGQR 245
Query: 140 LRSGVVAVASPGSRITFGDTHLAM 163
+ +A+PG RIT G + L +
Sbjct: 246 ITH---YMAAPGDRITIGQSVLVI 266
>gi|333978757|ref|YP_004516702.1| FHA domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822238|gb|AEG14901.1| FHA domain containing protein [Desulfotomaculum kuznetsovii DSM
6115]
Length = 173
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL-RSGVVAVA 148
+T+GR E +VIP S HA I +GD V DL S NGT+++E RL R V+A
Sbjct: 92 ITLGR-GEHNGLVIPDPFSSQEHAVIFSRGDQYWVQDLGSLNGTYLNEVRLDRPTVLA-- 148
Query: 149 SPGSRITFGDTHLAMFR 165
G R+ G R
Sbjct: 149 -DGDRLRIGGVTFQFVR 164
>gi|258652403|ref|YP_003201559.1| SARP family transcriptional regulator [Nakamurella multipartita DSM
44233]
gi|258555628|gb|ACV78570.1| transcriptional regulator, SARP family [Nakamurella multipartita
DSM 44233]
Length = 385
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
++P ++ + S + +GR+ + D+VI VS HA I + + VTDL STNGT +
Sbjct: 294 RLPSGESLPVPSRGLRLGRMDDN-DLVIAGEKVSRYHAVIGESANGFTVTDLRSTNGTHV 352
Query: 136 DEKRLRSGVVAVASPGSRITFGDTHL 161
+++R+ + G RI G T L
Sbjct: 353 NDERVVES--HLLRDGDRIRIGGTEL 376
>gi|338533809|ref|YP_004667143.1| Pkn9 associate protein 1 [Myxococcus fulvus HW-1]
gi|337259905|gb|AEI66065.1| Pkn9 associate protein 1 [Myxococcus fulvus HW-1]
Length = 484
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
+D+ + ++S HA + ++GD + DL S NGTF++ R+ + V + PG ++ G+
Sbjct: 95 SDLRLQHPSISRRHAHLTRRGDRFFLKDLSSQNGTFLNRHRIAAEVELM--PGDEVSLGN 152
Query: 159 THLAM 163
L +
Sbjct: 153 ALLRL 157
>gi|120611722|ref|YP_971400.1| FHA domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120590186|gb|ABM33626.1| FHA domain containing protein [Acidovorax citrulli AAC00-1]
Length = 320
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T GR P+ V+ A VS LHA ++ G V D S NGT +D R+R +
Sbjct: 20 TFGRHPDSCRTVLQEADVSKLHAIVRWSGMRWEVAD-QSRNGTLLDNARMRPAHWHGLAE 78
Query: 151 GSRITFGDTHLAMF 164
GS I FG + A++
Sbjct: 79 GSEIRFGASVAAVW 92
>gi|115359733|ref|YP_776871.1| FHA domain-containing protein [Burkholderia ambifaria AMMD]
gi|115285021|gb|ABI90537.1| FHA domain containing protein [Burkholderia ambifaria AMMD]
Length = 333
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR R D VI +VS +HA I+ G + D S+NGT + LR G AV G
Sbjct: 22 GRDDARCDTVIRDGSVSRVHAHIRWVGGLWELYD-HSSNGTSVSGVALRDGEHAVLHRGD 80
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKT 178
I FG +A +RV DT++ P+ T
Sbjct: 81 VIRFGRAGIAPWRV---DTLDDPADT 103
>gi|317507742|ref|ZP_07965446.1| FHA domain-containing protein [Segniliparus rugosus ATCC BAA-974]
gi|316253941|gb|EFV13307.1| FHA domain-containing protein [Segniliparus rugosus ATCC BAA-974]
Length = 157
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 87 STEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+T + +G P RAD +V+ S HAR+ K+G+ V DL STNGT++D+ ++
Sbjct: 75 NTRIALGDAPVLIGRADDSTLVVTDEYASSRHARLLKRGEDWFVEDLGSTNGTYLDQVKV 134
Query: 141 RSGV-VAVASP 150
+ V V + SP
Sbjct: 135 TAAVRVPLGSP 145
>gi|118465098|ref|YP_880660.1| transcriptional regulator [Mycobacterium avium 104]
gi|118166385|gb|ABK67282.1| putative transcriptional regulator [Mycobacterium avium 104]
Length = 381
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GRL + D+V+ VS HA I G S ++ DL S+NG + ++R+ S AV
Sbjct: 302 TIGRLDDN-DIVLDSPKVSRHHAVIVDTGTSYIINDLRSSNGVHVQDQRIHSA--AVLQD 358
Query: 151 GSRITFGDTHLAMFRVSK 168
G RI + H FR+++
Sbjct: 359 GDRIRICE-HEFTFRLAE 375
>gi|452910182|ref|ZP_21958864.1| Adenylate cyclase [Kocuria palustris PEL]
gi|452834800|gb|EME37599.1| Adenylate cyclase [Kocuria palustris PEL]
Length = 256
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+ + VS H I+++G+ L DL STNG+ +D +RLR V G+ I G
Sbjct: 182 ADITVEDTGVSRQHLEIRREGEHWLAVDLGSTNGSLVDGQRLRGRTELVN--GAVIEMGR 239
Query: 159 THLAMFRV 166
T + +FR+
Sbjct: 240 TRI-VFRL 246
>gi|257454587|ref|ZP_05619843.1| FHA domain protein [Enhydrobacter aerosaccus SK60]
gi|257447897|gb|EEV22884.1| FHA domain protein [Enhydrobacter aerosaccus SK60]
Length = 296
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++GR + ++V+ + +S HA+I + G+ L V DL S+NGTFI+ +R+
Sbjct: 43 LSIGR-SDSNNLVLATSQISRQHAKINRIGEQLYVQDLGSSNGTFINGERI 92
>gi|146161134|ref|XP_976679.2| FHA domain containing protein [Tetrahymena thermophila]
gi|146146844|gb|EAR86084.2| FHA domain containing protein [Tetrahymena thermophila SB210]
Length = 309
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 58 ERWLLQPVGDGDTSHI-GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQ 116
+R++L+ + D++ I +K+ + + +GR ++ ++ I ++S HA I
Sbjct: 2 KRYILKLIDGKDSTTIQKWKLKKDNTY-------IIGR-SDKVEIPIQQESISRKHAEIC 53
Query: 117 KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
+S + DL S NGTFID+K + + G++I GD+
Sbjct: 54 VLENSATIKDLGSANGTFIDDKIAKHNQIIFLKNGTKIYLGDS 96
>gi|444918143|ref|ZP_21238221.1| response regulator HsfA [Cystobacter fuscus DSM 2262]
gi|444710039|gb|ELW51028.1| response regulator HsfA [Cystobacter fuscus DSM 2262]
Length = 440
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+ + E VG+ P D+++ T+S H +++ + +L DLDS NG+F + R
Sbjct: 30 GYSLDQREYIVGKAPT-CDIILADKTISRQHLKLEVHEEHVLAVDLDSRNGSFCEGLRFS 88
Query: 142 SGVVAVASPGSRITFGDTHL 161
+ PGS IT G T L
Sbjct: 89 QMEL---RPGSVITLGTTEL 105
>gi|22299953|ref|NP_683200.1| adenylate cyclase [Thermosynechococcus elongatus BP-1]
gi|12060475|dbj|BAB20624.1| adenylate cyclase [Thermosynechococcus elongatus]
gi|22296138|dbj|BAC09962.1| adenylate cyclase [Thermosynechococcus elongatus BP-1]
Length = 399
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKG-DSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
T+GR E +V+ +S HA IQ+ G + DL S NGTF++ +R+ S +A+ +
Sbjct: 93 TIGR-SEDNSIVLSDRWMSRNHAMIQRMGRGEFYLIDLGSRNGTFVNGRRV-SIPIALHN 150
Query: 150 PGSRITFGDTHLAMF 164
G RITFG T L F
Sbjct: 151 -GDRITFGQTELDFF 164
>gi|440777939|ref|ZP_20956718.1| transcriptional regulator [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436721747|gb|ELP45835.1| transcriptional regulator [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 381
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GRL + D+V+ VS HA I G S ++ DL S+NG + ++R+ S AV
Sbjct: 302 TIGRLDDN-DIVLDSPKVSRHHAVIVDTGTSYIINDLRSSNGVHVQDQRIHSA--AVLQD 358
Query: 151 GSRITFGDTHLAMFRVSK 168
G RI + H FR+++
Sbjct: 359 GDRIRICE-HEFTFRLAE 375
>gi|41408601|ref|NP_961437.1| EmbR_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396959|gb|AAS04820.1| EmbR_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 380
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GRL + D+V+ VS HA I G S ++ DL S+NG + ++R+ S AV
Sbjct: 301 TIGRLDDN-DIVLDSPKVSRHHAVIVDTGTSYIINDLRSSNGVHVQDQRIHSA--AVLQD 357
Query: 151 GSRITFGDTHLAMFRVSK 168
G RI + H FR+++
Sbjct: 358 GDRIRICE-HEFTFRLAE 374
>gi|308234209|ref|ZP_07664946.1| FHA domain containing protein [Atopobium vaginae DSM 15829]
Length = 437
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ +E+ + + +GR A +V+ + +S HA+I G + L+ DL STNGT ++ +
Sbjct: 355 ETYEVFAPQTVIGRERSHAQIVLRDSNISRRHAQITYNGRNWLIQDLGSTNGTQVNNMTV 414
Query: 141 RSGVVAVASPGSRITFGDTHL 161
S V+ G IT T+L
Sbjct: 415 DSCVL---RNGDIITLALTNL 432
>gi|227549472|ref|ZP_03979521.1| FHA domain protein [Corynebacterium lipophiloflavum DSM 44291]
gi|227078471|gb|EEI16434.1| FHA domain protein [Corynebacterium lipophiloflavum DSM 44291]
Length = 148
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 84 EIASTE-VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
EIAS E +T+GR +D V+ S HAR+ ++G + DLDS NGTF+ R+
Sbjct: 69 EIASVEDLTLGR-ANSSDFVLGDDFASSTHARLFRRGSEWFIEDLDSRNGTFVQGLRI 125
>gi|427723232|ref|YP_007070509.1| FHA modulated ABC efflux pump ATPase/integral membrane protein
[Leptolyngbya sp. PCC 7376]
gi|427354952|gb|AFY37675.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Leptolyngbya sp. PCC 7376]
Length = 796
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
+ P + I + ++T+GR + AD+++ TVS HA + + S V + STNG F+
Sbjct: 129 QTPQKRSVLIQNKKITIGR-DDNADLILDAPTVSRTHATVTQLSPSKFVLEDKSTNGVFV 187
Query: 136 DEKRLRSGVVAVASPGSRITFGDTHLAM 163
+ ++++S P S I G L +
Sbjct: 188 NGQKVQSA--TTLDPNSTIRIGPYTLVL 213
>gi|231274765|emb|CAX36916.1| zeaxanthin epoxidase enzyme [Triticum aestivum]
Length = 364
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 101 MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGSRIT 155
+ P+ VS +HA I K +TDL S +GT+ ++ RL P I
Sbjct: 273 LSFPLPQVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIE 332
Query: 156 FGDTHLAMFRVSKIDTV 172
FG AMFRV + T+
Sbjct: 333 FGSDKKAMFRVKVLSTL 349
>gi|390566390|ref|ZP_10246780.1| FHA domain containing protein [Nitrolancetus hollandicus Lb]
gi|390170349|emb|CCF86126.1| FHA domain containing protein [Nitrolancetus hollandicus Lb]
Length = 252
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 78 PMPD-AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
P PD AF + T+GR + D+VI V VS HAR+ + DL+STNGT ++
Sbjct: 161 PSPDQAFVVRKPSTTIGRSLDN-DVVIEVPEVSRHHARLDYTNGVFRIVDLNSTNGTAVN 219
Query: 137 EKRLRSGVVAVASPGSRITFGDTHLAMF 164
+ + V G RIT G T L
Sbjct: 220 GTKAKQQNV---KDGDRITLGLTTLEFL 244
>gi|383458038|ref|YP_005372027.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
gi|380730739|gb|AFE06741.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
Length = 180
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 58 ERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQK 117
E LL + D D + F P D E TVGR + D+++P +VS HA ++
Sbjct: 59 EERLLAMLRDFDNLEVHFLQPNQDG-----EEFTVGRT-DACDLMVPEPSVSQHHATLRW 112
Query: 118 KGDS--LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
S V D S NGTFI+ L + G+ + FGD R +
Sbjct: 113 NAASGDFSVRDAQSMNGTFINGAPLGFKAQVMLHDGATLAFGDVQFLYLRAETL 166
>gi|340794265|ref|YP_004759728.1| inhibitor of ODH activity [Corynebacterium variabile DSM 44702]
gi|340534175|gb|AEK36655.1| inhibitor of ODH activity [Corynebacterium variabile DSM 44702]
Length = 144
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + T GR P+ +D+ + TVS HA ++ GD V D+ S NGT+++ + S
Sbjct: 61 FLLDQDTTTAGRHPD-SDIFLDDVTVSRRHAEFRRSGDDYEVVDVGSLNGTYVNREPKNS 119
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSK 168
AV S G I G L +K
Sbjct: 120 ---AVLSNGDEIQIGKFRLVFLNGAK 142
>gi|318081534|ref|ZP_07988850.1| ABC transporter ATP-binding subunit [Streptomyces sp. SA3_actF]
Length = 106
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
TVGR P+ AD+V A VS HA + + D STNGTF D +R+ AV P
Sbjct: 26 TVGRDPQ-ADIVAEDARVSWRHATLGWTASGWTIEDGGSTNGTFTDGRRI---TRAVLGP 81
Query: 151 GSRITFGD 158
G+ + G+
Sbjct: 82 GTVVNLGN 89
>gi|453382321|dbj|GAC83204.1| hypothetical protein GP2_009_00680 [Gordonia paraffinivorans NBRC
108238]
Length = 839
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P+ D+V+ S HAR+ +G L++ DL S NGTF++ R+ S A + G
Sbjct: 205 IGRTPDN-DIVVSDVLASRHHARVSTRGGMLVIEDLGSVNGTFVNGHRVAS---APLNEG 260
Query: 152 SRITFGDT 159
+T G++
Sbjct: 261 DVVTIGNS 268
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S +T+GR P+ D+V+ VS H I+ +G + + DL STNG F +R+ A
Sbjct: 24 SPRLTLGREPDN-DIVVNHPLVSRRHLAIEWRGSAWYLVDLGSTNGFFAGGQRVPE--FA 80
Query: 147 VASPGSRITFGD 158
V+ P +R+ GD
Sbjct: 81 VSGP-TRVRLGD 91
>gi|359419919|ref|ZP_09211865.1| hypothetical protein GOARA_048_01360 [Gordonia araii NBRC 100433]
gi|358244289|dbj|GAB09934.1| hypothetical protein GOARA_048_01360 [Gordonia araii NBRC 100433]
Length = 152
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P RAD +V+ S HAR+ ++GD + DL STNGT++D
Sbjct: 68 LANTRITLGDQPLLLGRADDSTLVLTDDYASERHARLSRRGDDWYLEDLGSTNGTYLDRA 127
Query: 139 RLRSGV 144
++ + V
Sbjct: 128 KVTTAV 133
>gi|309790900|ref|ZP_07685442.1| transcriptional regulator domain-containing protein [Oscillochloris
trichoides DG-6]
gi|308227014|gb|EFO80700.1| transcriptional regulator domain-containing protein [Oscillochloris
trichoides DG6]
Length = 231
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+TVGR D+VI S HAR ++G+ + DL+STNGTFI+ +RL
Sbjct: 37 ITVGR-DSSNDIVIDHPLASRRHARFVREGEGFTLLDLESTNGTFINGERL 86
>gi|328943490|ref|ZP_08240955.1| hypothetical protein HMPREF0091_10180 [Atopobium vaginae DSM 15829]
gi|327491459|gb|EGF23233.1| hypothetical protein HMPREF0091_10180 [Atopobium vaginae DSM 15829]
Length = 435
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ +E+ + + +GR A +V+ + +S HA+I G + L+ DL STNGT ++ +
Sbjct: 353 ETYEVFAPQTVIGRERSHAQIVLRDSNISRRHAQITYNGRNWLIQDLGSTNGTQVNNMTV 412
Query: 141 RSGVVAVASPGSRITFGDTHL 161
S V+ G IT T+L
Sbjct: 413 DSCVL---RNGDIITLALTNL 430
>gi|421864309|ref|ZP_16295996.1| hypothetical protein I35_0684 [Burkholderia cenocepacia H111]
gi|358075886|emb|CCE46874.1| hypothetical protein I35_0684 [Burkholderia cenocepacia H111]
Length = 353
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR R D VI +VS +HA I+ G + D S+NGT + LR G AV G
Sbjct: 42 GRDDARCDTVIRDGSVSRVHAHIRWVGGLWELHD-HSSNGTSVSGVSLRDGEHAVLQQGD 100
Query: 153 RITFGDTHLAMFRVSKID 170
I FG +A +RV +D
Sbjct: 101 VIRFGRAGIAPWRVESLD 118
>gi|253999961|ref|YP_003052024.1| FHA domain-containing protein [Methylovorus glucosetrophus SIP3-4]
gi|253986640|gb|ACT51497.1| FHA domain containing protein [Methylovorus glucosetrophus SIP3-4]
Length = 232
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D+ I +SG HA++ G + L+ DLDSTNGT I+ R++ V+ G I G
Sbjct: 32 DIAIDNLMISGEHAQVMSIGRNALLQDLDSTNGTMINGVRVKQHVL---QHGDIIMLGHY 88
Query: 160 HLAMFRVSKIDT----VEAPSKTEESEE 183
L + + V+AP+ E++E
Sbjct: 89 QLRYWDEAAASGNPVPVDAPAVAPEADE 116
>gi|229817653|ref|ZP_04447935.1| hypothetical protein BIFANG_02924 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785442|gb|EEP21556.1| hypothetical protein BIFANG_02924 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 147
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
EVTVGR P +D+++ +TVS HA ++ + V D S NGT+++ +R+ A
Sbjct: 69 EVTVGRDPH-SDILLDDSTVSRAHAVFRRMNGAFTVVDAGSLNGTYVNRQRIDH---AQL 124
Query: 149 SPGSRITFGDTHLAMFRVSKI 169
G I G L F S I
Sbjct: 125 KNGDEIMIGKFRLVFFTKSAI 145
>gi|310822229|ref|YP_003954587.1| FHA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309395301|gb|ADO72760.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 298
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D +I + +GR + D+VI VS HA I ++G + ++ DL S+NGT+ +++R+
Sbjct: 217 DQQKIGNDRFVIGR-GKHCDLVINSGKVSREHAVILREGPNFIIEDLGSSNGTWFNKQRI 275
Query: 141 R 141
+
Sbjct: 276 K 276
>gi|262195387|ref|YP_003266596.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262078734|gb|ACY14703.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 306
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S++ VGR ++ + VS HA + +G+ + DL S NGT+++++RL++G
Sbjct: 14 MLSSQSLVGR-ARTCNLHLGELWVSSQHAALCWRGEGWELRDLHSKNGTYVNQRRLQAGE 72
Query: 145 VAVASPGSRITFGDT 159
++I FGD
Sbjct: 73 SVWVFKDNQIAFGDV 87
>gi|300853515|ref|YP_003778499.1| hypothetical protein CLJU_c03130 [Clostridium ljungdahlii DSM
13528]
gi|300433630|gb|ADK13397.1| conserved hypothetical protein with a FHA domain [Clostridium
ljungdahlii DSM 13528]
Length = 146
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQ-KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
E+T+GR + M+ T SG HARI K G ++ D+ STNGT ++ K+LR G +
Sbjct: 72 EITIGRKGDNQLMLEDPYT-SGHHARIYIKNGKECILEDMGSTNGTLLNGKKLR-GKHYL 129
Query: 148 ASPGSRITFGDT 159
AS G I G+T
Sbjct: 130 AS-GDEIKIGNT 140
>gi|283781772|ref|YP_003372527.1| protein serine phosphatase [Pirellula staleyi DSM 6068]
gi|283440225|gb|ADB18667.1| protein serine phosphatase with GAF(s) sensor(s) [Pirellula staleyi
DSM 6068]
Length = 566
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+++ + +GR P+ D+VI V VS H ++ + G++ + DL S NGTF++++
Sbjct: 16 YDLRDPKYVMGRHPD-CDIVIEVGAVSRNHCQLVRDGNAYFLEDLGSRNGTFLNDE 70
>gi|224094316|ref|XP_002310139.1| predicted protein [Populus trichocarpa]
gi|222853042|gb|EEE90589.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 101 MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE---KRLRS--GVVAVASPGSRIT 155
+VIP VS HARI K + + DL S +G+FI + +R R+ P I
Sbjct: 551 IVIPAPQVSKTHARITCKDGAFYLIDLRSEHGSFITDIEGRRYRAPPNFPTRFHPSDMIE 610
Query: 156 FGDTHLAMFRVSKIDTVEAPSKTEESEEKG 185
FG +FRV + +P K E +++G
Sbjct: 611 FGSDKKVIFRVK---VMRSPPKISEKKDEG 637
>gi|88855336|ref|ZP_01130000.1| hypothetical protein A20C1_00896 [marine actinobacterium PHSC20C1]
gi|88815243|gb|EAR25101.1| hypothetical protein A20C1_00896 [marine actinobacterium PHSC20C1]
Length = 202
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----EKRLRSGVVAVASPGSRITFGD 158
P VS H +++ G S++VTDL STNG+ + ++LR G V S G+ + GD
Sbjct: 130 PTREVSETHVEVRQLGSSVIVTDLRSTNGSLVQVPGNAARKLRQGESVVVSAGTLVDIGD 189
Query: 159 THL 161
++
Sbjct: 190 GNI 192
>gi|359460901|ref|ZP_09249464.1| ABC transporter ATP-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 995
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 77 VPMPDAFEIASTEV-------TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDS 129
+P D E T V + GR P R VI VS HA+I K + ++ DL S
Sbjct: 220 IPQTDVIEQVETLVLRELKSLSFGRDP-RNTTVIDHPVVSRFHAQIDLKSGTWVIEDLHS 278
Query: 130 TNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
+NGT+++ ++LR+ PG I G H
Sbjct: 279 SNGTYVNGRQLRNP--QPLRPGDTIRIGPYHFVF 310
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF-----IDE 137
F + +T+GR P+ D+VI + VS HA++ + ++ + DLDS +G I E
Sbjct: 140 FPLNQETLTLGRHPQ-CDIVIDLPVVSDRHAQLNWENETYTIRDLDSLHGLIFAGDRIQE 198
Query: 138 KRLRSG 143
K L+ G
Sbjct: 199 KALQDG 204
>gi|291521746|emb|CBK80039.1| FOG: FHA domain [Coprococcus catus GD/7]
Length = 434
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
VG L VIPV +S HARI+K + + DL+STNGT I+ + L+
Sbjct: 360 CMVGSLQAEDVYVIPVRGISRKHARIEKTEKGIYLMDLNSTNGTRINGEELK 411
>gi|171316043|ref|ZP_02905270.1| FHA domain containing protein [Burkholderia ambifaria MEX-5]
gi|171098847|gb|EDT43639.1| FHA domain containing protein [Burkholderia ambifaria MEX-5]
Length = 333
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR R D VI +VS +HA I+ G + D S+NGT + LR G AV G
Sbjct: 22 GRDDTRCDTVIRDGSVSRVHAHIRWVGGLWELHD-HSSNGTSVSGVALRDGEHAVLQRGD 80
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKT 178
I FG +A +RV DT++ P+ T
Sbjct: 81 VIRFGRAGIAPWRV---DTLDDPADT 103
>gi|383454027|ref|YP_005368016.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
gi|380728435|gb|AFE04437.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
Length = 314
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
A+ ++ VGR E DMV+ VS HA+I ++ + DL STNGTF++ ++++
Sbjct: 29 ANKQIVVGRSSE-LDMVLVEDMVSRKHAKILFSDGAITIEDLGSTNGTFVNGEKVKQ--- 84
Query: 146 AVASPGSRITFGDTHLAM 163
A G RI G + L +
Sbjct: 85 AKLKEGDRILIGTSILKL 102
>gi|153003777|ref|YP_001378102.1| FHA domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152027350|gb|ABS25118.1| FHA domain containing protein [Anaeromyxobacter sp. Fw109-5]
Length = 120
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----E 137
F + + T+GR E + +V+ S HARI G + ++ DLDSTNGTF++ E
Sbjct: 40 FRLGEEDATLGR-DEGSTVVVASDQASRRHARIFVSGGAHVLVDLDSTNGTFLNSKLVQE 98
Query: 138 KRLRSG-VVAVAS 149
+ LR G V+ +AS
Sbjct: 99 QTLRHGDVIRIAS 111
>gi|373486131|ref|ZP_09576808.1| Forkhead-associated protein [Holophaga foetida DSM 6591]
gi|372012320|gb|EHP12894.1| Forkhead-associated protein [Holophaga foetida DSM 6591]
Length = 453
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+TVGR P+ A + + +VS HA + G + ++ DL STNGT+++E+R++ V
Sbjct: 22 LTVGRGPDNA-LRLDDGSVSSHHAVFRCLGGNWMLQDLGSTNGTWVNEERVQERV--WLK 78
Query: 150 PGSRITFGDTHLAMFRVSKIDT-VEAPSKTEESEEKGDSPPL 190
G R+ FG L M +V + AP + + PP+
Sbjct: 79 EGDRLRFG---LVMAQVGGLPAPFTAPLRPPPVPARSLPPPV 117
>gi|366166763|ref|ZP_09466518.1| FHA domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 551
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GRL + D V + +HA I + + DL+S NGT+I+ KRL S
Sbjct: 477 IGRLDGQVDYVHSNNAIGKMHAEIITRAGCYYLKDLNSKNGTYINGKRLESNKEYEIRNN 536
Query: 152 SRITFGDTHLAM 163
+IT ++
Sbjct: 537 DKITLANSEFIF 548
>gi|206561898|ref|YP_002232661.1| putative FHA-domain-containing protein [Burkholderia cenocepacia
J2315]
gi|444359951|ref|ZP_21161221.1| FHA domain protein [Burkholderia cenocepacia BC7]
gi|444371092|ref|ZP_21170677.1| FHA domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|198037938|emb|CAR53883.1| putative FHA-domain protein [Burkholderia cenocepacia J2315]
gi|443596099|gb|ELT64627.1| FHA domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|443601149|gb|ELT69305.1| FHA domain protein [Burkholderia cenocepacia BC7]
Length = 353
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR R D VI +VS +HA I+ G + D S+NGT + LR G AV G
Sbjct: 42 GRDDARCDTVIRDGSVSRVHAHIRWVGGLWELHD-HSSNGTSVSGVSLRDGEHAVLQQGD 100
Query: 153 RITFGDTHLAMFRVSKID 170
I FG +A +RV +D
Sbjct: 101 VIRFGRAGIAPWRVESLD 118
>gi|121533697|ref|ZP_01665524.1| FHA domain containing protein [Thermosinus carboxydivorans Nor1]
gi|121307688|gb|EAX48603.1| FHA domain containing protein [Thermosinus carboxydivorans Nor1]
Length = 151
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR--- 139
FE+A T ++GR + D+VI A VS HA I + DL+STNGTF++ +R
Sbjct: 73 FELAET-TSIGR-SDANDIVINEAYVSHEHACISFYKQQYWLADLNSTNGTFVNGQRITG 130
Query: 140 ---LRSG 143
LRSG
Sbjct: 131 EVPLRSG 137
>gi|291517860|emb|CBK73081.1| Uncharacterized conserved protein, contains FHA domain
[Butyrivibrio fibrisolvens 16/4]
Length = 312
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 66 GDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPV-ATVSGLHARIQKKGDSLLV 124
G G + P P I+ +V +G+ + D I +S H RI K+ + +
Sbjct: 213 GAGSIRLVACDAPYPFEISISENDVLIGKKADLVDKAIEYNGAISRRHCRIVKQNGNFFI 272
Query: 125 TDLDSTNGTFIDEKRLRSG 143
D S NGTF++ R+ G
Sbjct: 273 MDEGSANGTFVNGNRVDMG 291
>gi|392594419|gb|EIW83743.1| kinase-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 475
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS-----LLVTDLDSTNGTFIDEK 138
E++ +GR E D V+ +SG H IQ G +++TD STNGT+ID
Sbjct: 54 ELSKKVFAIGR-SEENDFVLRGNKISGKHCTIQWNGQDDNTSFVMITDT-STNGTWIDGD 111
Query: 139 RLRSGVVAVASPGSRITFG 157
R+ + GS + FG
Sbjct: 112 RIYKDQFLLLKEGSEVVFG 130
>gi|388490590|gb|AFK33361.1| unknown [Lotus japonicus]
Length = 223
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 60 WLLQPVGDGDTSHIGFKVPMPDAFEIASTEV---TVGRLPERADMVIPVATVSGLHARIQ 116
W L P GD +T H + I+ E+ +G + + IP VS +HARI
Sbjct: 97 WTLLPCGD-ETGH-------SEPIRISQNEMKPCIIGSELQGTSVTIPSPQVSPMHARIN 148
Query: 117 KKGDSLLVTDLDSTNGTFIDE---KRLR--SGVVAVASPGSRITFGDTHLAMFRVSKIDT 171
K + DL S +GT+I + KR R A P + FG ++ FRV T
Sbjct: 149 YKDGGFFLIDLRSEHGTWISDIEGKRYRVPPNYPARIHPSDVLEFGSRKVS-FRVKVTRT 207
Query: 172 VEAPSKTEESEEK 184
AP +EE K
Sbjct: 208 --APRVSEEERTK 218
>gi|351731646|ref|ZP_08949337.1| FHA domain-containing protein [Acidovorax radicis N35]
Length = 218
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
T+GR P D+VI VSG HA I G + + DL STNGT+++ K ++
Sbjct: 24 TLGRRPYN-DIVIDNLAVSGEHAVIHMAGQDVEIEDLGSTNGTYVNAKAVK 73
>gi|309791905|ref|ZP_07686388.1| winged helix family two component response transcriptional
regulator [Oscillochloris trichoides DG-6]
gi|308226077|gb|EFO79822.1| winged helix family two component response transcriptional
regulator [Oscillochloris trichoides DG6]
Length = 217
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
P F + T +T+GR + D+V+ VS HARI++ G L+ D S NGT+I+ +
Sbjct: 29 PSTFSLRGTVITIGRGSD-CDVVVQRREVSRRHARIERVGIRYLLIDEQSANGTYINGR 86
>gi|381399883|ref|ZP_09924900.1| Forkhead-associated protein [Microbacterium laevaniformans OR221]
gi|380772846|gb|EIC06533.1| Forkhead-associated protein [Microbacterium laevaniformans OR221]
Length = 183
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ S +T+GR E + +VI S HAR+ GD ++ DLDSTNGT+ D R+ + V
Sbjct: 106 LGSEALTIGRSSE-SGLVIRDDYTSSHHARLLLWGDQWMIQDLDSTNGTWHDGARVSTPV 164
Query: 145 -VAVASP 150
V V +P
Sbjct: 165 PVRVGAP 171
>gi|261854787|ref|YP_003262070.1| FHA domain containing protein [Halothiobacillus neapolitanus c2]
gi|261835256|gb|ACX95023.1| FHA domain containing protein [Halothiobacillus neapolitanus c2]
Length = 172
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 73 IGFKVPMPDA-FEIASTEVTVGRLPERAD--MVIPVATVSGLHARIQKKGDSLLVTDLDS 129
IG P + F + + T+GR RAD +V+ +VS LHA I + V ++ S
Sbjct: 48 IGLTPPFINQRFTLRQGKTTIGR---RADNNIVLADGSVSSLHAWIIEDNGQYRVMNILS 104
Query: 130 TNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
TNG+F+++ R+ A G RI FG L +
Sbjct: 105 TNGSFVNDARITE---APLQDGDRIRFGGVELQL 135
>gi|149173775|ref|ZP_01852404.1| probable protein kinase yloP-putative serine/threonine protein
kinase [Planctomyces maris DSM 8797]
gi|148847305|gb|EDL61639.1| probable protein kinase yloP-putative serine/threonine protein
kinase [Planctomyces maris DSM 8797]
Length = 546
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 50 TTSTDVAAER------WLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVI 103
T STDV AE+ +LQP+ D + F I V +GR D+ +
Sbjct: 400 TESTDVMAEKASSALTGVLQPIDLIDLDN-------KQRFPITKERVVLGR-NAGCDIRL 451
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
+SG H + +VTDL S NGT ++ KR++ ++ PG+ ++ T+
Sbjct: 452 DRPGISGEHCAFHYENTGWIVTDLKSKNGTEVEGKRVQEQIL---FPGNTLSLAATY--H 506
Query: 164 FRVSKIDTVEAPSKTE 179
FRV+ + SK++
Sbjct: 507 FRVASPNQYVKKSKSK 522
>gi|318057742|ref|ZP_07976465.1| ABC transporter ATP-binding subunit [Streptomyces sp. SA3_actG]
Length = 141
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
TVGR P+ AD+V A VS HA + + D STNGTF D +R+ AV
Sbjct: 25 YTVGRDPQ-ADIVAEDARVSWRHATLGWTASGWTIEDGGSTNGTFTDGRRI---TRAVLG 80
Query: 150 PGSRITFGD 158
PG+ + G+
Sbjct: 81 PGTVVNLGN 89
>gi|254774296|ref|ZP_05215812.1| putative transcriptional regulator [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 381
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GRL + D+V+ VS HA I G S ++ DL S+NG + ++R+ S AV
Sbjct: 302 TIGRLDDN-DIVLDSPRVSRHHAVIVDTGTSYIINDLRSSNGVHVQDQRIHSA--AVLQD 358
Query: 151 GSRITFGDTHLAMFRVSK 168
G RI + H FR+++
Sbjct: 359 GDRIRICE-HEFTFRLAE 375
>gi|87299447|dbj|BAE79556.1| zeaxanthin epoxidase [Chrysanthemum x morifolium]
Length = 658
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 33/151 (21%)
Query: 54 DVAAER-----WLLQPVG--DGDTSHIGF----KVPMPDAFEIASTEVTVGRLPERA--- 99
D A ER W L P+G + D++ + K+P VG +P +
Sbjct: 516 DDALERALTGEWFLLPIGSSNADSAPVSLSRDEKMP-----------CIVGSVPHTSIPG 564
Query: 100 -DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLR--SGVVAVASPGSR 153
+VI +S LHARI K + VTDL S +GT+I +++R R A P
Sbjct: 565 NSIVISSPEISKLHARISCKDGAFYVTDLRSEHGTWITDNEDRRYRVPPNFPARFHPSDV 624
Query: 154 ITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
+ FG FRV I + P TEE ++
Sbjct: 625 LEFGPNKKVAFRVKVIRS--QPKITEEGGDR 653
>gi|83589759|ref|YP_429768.1| FHA domain-containing protein [Moorella thermoacetica ATCC 39073]
gi|83572673|gb|ABC19225.1| FHA domain containing protein [Moorella thermoacetica ATCC 39073]
Length = 162
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
+++GR D++I + VS HA I ++G + DLDSTNGT+++ RL +G ++
Sbjct: 73 NISIGR-DNHNDIIINDSHVSARHAVITRQGREWKILDLDSTNGTYVNGLRL-TGPHSL- 129
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAP 175
PG +I+ G F+V D +P
Sbjct: 130 RPGDKISIGGV---TFKVGWEDASRSP 153
>gi|337289668|ref|YP_004628689.1| hypothetical protein CULC22_00049 [Corynebacterium ulcerans
BR-AD22]
gi|384514594|ref|YP_005709686.1| hypothetical protein CULC809_00051 [Corynebacterium ulcerans 809]
gi|397652801|ref|YP_006493484.1| hypothetical protein CULC0102_0049 [Corynebacterium ulcerans 0102]
gi|334695795|gb|AEG80592.1| putative secreted protein [Corynebacterium ulcerans 809]
gi|334697974|gb|AEG82770.1| putative secreted protein [Corynebacterium ulcerans BR-AD22]
gi|393401757|dbj|BAM26249.1| putative membrane protein [Corynebacterium ulcerans 0102]
Length = 159
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+T+GR E V+ S HAR+ K+G+ DLDS NGTF+ R+
Sbjct: 86 EITLGRAKE-CTFVVGDDYASARHARLIKRGNEWFAEDLDSRNGTFVGGYRI 136
>gi|333369880|ref|ZP_08461968.1| FHA domain protein [Psychrobacter sp. 1501(2011)]
gi|332969116|gb|EGK08152.1| FHA domain protein [Psychrobacter sp. 1501(2011)]
Length = 383
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+TVGR + D+V+ VS HA + D L V DL S+NGT +++++L +
Sbjct: 29 LTVGRGQDN-DVVLGSKQVSRQHAELTVVNDQLSVQDLGSSNGTLVNDEKLVPHEPKILK 87
Query: 150 PGSRITFGDTHLAMFRVSKIDTVE 173
ITF FRV+++ TV+
Sbjct: 88 DADVITFA---AFSFRVNQVQTVQ 108
>gi|327348218|gb|EGE77075.1| hypothetical protein BDDG_00012 [Ajellomyces dermatitidis ATCC
18188]
Length = 649
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 85 IASTEVTVGRLPER---ADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEK 138
+AS + T G L R D V+ + T+S H I K+GDS+ + + S+NGTFI+E
Sbjct: 171 LASQDHTGGYLIGRHSECDFVLDIPTISNRHCLIYNENKRGDSVAILEDLSSNGTFINEA 230
Query: 139 RLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
+ G IT D +FR KI
Sbjct: 231 IIGRNKRRELEDGDEITVLDEARFVFRYPKI 261
>gi|320160548|ref|YP_004173772.1| hypothetical protein ANT_11380 [Anaerolinea thermophila UNI-1]
gi|319994401|dbj|BAJ63172.1| hypothetical protein ANT_11380 [Anaerolinea thermophila UNI-1]
Length = 150
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 80 PDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
P F++ E+ VGR A+ I TVS HAR+ V DL STNGTF++ +R
Sbjct: 59 PATFDLP--EILVGR-SASANYTIRNETVSSQHARLSYHHHQWWVEDLKSTNGTFLNGER 115
Query: 140 LRSGVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
+ S V + G + G ++ + TV P K +
Sbjct: 116 VVSPTVVMN--GDELRCGQVNIRV-------TVHEPQKQQ 146
>gi|302550475|ref|ZP_07302817.1| ABC transporter ATP-binding protein [Streptomyces viridochromogenes
DSM 40736]
gi|302468093|gb|EFL31186.1| ABC transporter ATP-binding protein [Streptomyces viridochromogenes
DSM 40736]
Length = 852
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S T+GR P+ D+V A VS HA + G S ++ D STNGTF+ +R+ +
Sbjct: 18 SRAYTLGRDPQ-GDVVFDDARVSWRHATVSFNGRSWVIEDHGSTNGTFVQGQRIHQMELG 76
Query: 147 VASPGSRITFGD 158
PGS + G+
Sbjct: 77 ---PGSAVNLGN 85
>gi|433455849|ref|ZP_20413917.1| FHA domain-containing protein [Arthrobacter crystallopoietes
BAB-32]
gi|432197053|gb|ELK53462.1| FHA domain-containing protein [Arthrobacter crystallopoietes
BAB-32]
Length = 161
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++A++ + +GR E A +V+ SG HAR+ +G + DL STNGT++ + +L
Sbjct: 82 LDLAASPILLGRAQE-ATLVLEDDYASGRHARLFPQGSRWFIEDLGSTNGTYLGDTQLTR 140
Query: 143 GVVAVASPGSRITFGDT 159
+ PG I G T
Sbjct: 141 AL--PVEPGVPIRIGKT 155
>gi|404214965|ref|YP_006669160.1| ABC-type multidrug transport system, ATPase component [Gordonia sp.
KTR9]
gi|403645764|gb|AFR49004.1| ABC-type multidrug transport system, ATPase component [Gordonia sp.
KTR9]
Length = 845
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P+ D+V+ S HA++ +G +L++ DL S NGTF++ +R+ S A + G
Sbjct: 211 IGRTPDN-DIVVSDVLASRHHAQVSSRGAALVIEDLGSVNGTFVNGRRVSS---APLTDG 266
Query: 152 SRITFGDT 159
+T G++
Sbjct: 267 DVVTIGNS 274
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
S VT+GR P+ D+VI VS H I+ +G + + D+ STNG F++ +R+ +V
Sbjct: 13 GSPRVTLGREPDN-DIVINHPMVSRRHLAIEWRGAAWCLVDIGSTNGFFVNGQRMAEFMV 71
Query: 146 AVASPGS-RITFGDT 159
PGS ++ GD
Sbjct: 72 ----PGSMQVRLGDV 82
>gi|390362001|ref|XP_003730056.1| PREDICTED: forkhead-associated domain-containing protein 1-like,
partial [Strongylocentrotus purpuratus]
Length = 346
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD--SLLVTDLDSTNGTFIDEKRL 140
F+++ + VGR E D+ I ++++ HA I+ ++ DL++ +GT++++ R+
Sbjct: 13 FQLSPSVTLVGR--ENCDLNIQLSSIELQHAVIEYSDSESCFVIQDLNTAHGTYVNDCRV 70
Query: 141 RSGVVAVASPGSRITFGDT 159
++ V +A PG I FG T
Sbjct: 71 QNAAVRLA-PGDSIRFGYT 88
>gi|417749924|ref|ZP_12398306.1| DNA-binding transcriptional activator of the SARP family, partial
[Mycobacterium avium subsp. paratuberculosis S397]
gi|336458611|gb|EGO37578.1| DNA-binding transcriptional activator of the SARP family
[Mycobacterium avium subsp. paratuberculosis S397]
Length = 417
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T+GRL + D+V+ VS HA I G S ++ DL S+NG + ++R+ S AV
Sbjct: 338 TIGRLDDN-DIVLDSPKVSRHHAVIVDTGTSYIINDLRSSNGVHVQDQRIHSA--AVLQD 394
Query: 151 GSRITFGDTHLAMFRVSK 168
G RI + H FR+++
Sbjct: 395 GDRIRICE-HEFTFRLAE 411
>gi|225571335|ref|ZP_03780331.1| hypothetical protein CLOHYLEM_07433 [Clostridium hylemonae DSM
15053]
gi|225159811|gb|EEG72430.1| hypothetical protein CLOHYLEM_07433 [Clostridium hylemonae DSM
15053]
Length = 785
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI---DEKRLRSGVVA 146
VT+GR E+ D+VIP VS LH G+ D S NGTFI ++RL +G
Sbjct: 45 VTLGRSREQCDIVIPDNIVSKLHGTFFLDGERTWYEDNGSMNGTFIGDGQQRRLLTGGSG 104
Query: 147 VASPGSR--ITFGDTH------LAMFRVSKIDTV--EAPSKTE 179
A + + GD H L ++RV V +AP K E
Sbjct: 105 YAELYDKTVLRIGDVHAPDKMILLLYRVIPEGEVWKKAPLKGE 147
>gi|115379225|ref|ZP_01466341.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115363757|gb|EAU62876.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 270
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D +I + +GR + D+VI VS HA I ++G + ++ DL S+NGT+ +++R+
Sbjct: 189 DQQKIGNDRFVIGR-GKHCDLVINSGKVSREHAVILREGPNFIIEDLGSSNGTWFNKQRI 247
Query: 141 R 141
+
Sbjct: 248 K 248
>gi|108802881|ref|YP_642818.1| FHA domain-containing protein [Rubrobacter xylanophilus DSM 9941]
gi|108764124|gb|ABG03006.1| FHA domain containing protein [Rubrobacter xylanophilus DSM 9941]
Length = 155
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVA-TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKR 139
F I + T+GR +D+V+ VSG HAR+ + G L V DL STNGTF++ ++
Sbjct: 75 FPIGNGTTTIGR-SSASDIVLKSDDYVSGRHARLTRHGGLLYVEDLGSTNGTFVNGRK 131
>gi|445499462|ref|ZP_21466317.1| FHA domain containing protein [Janthinobacterium sp. HH01]
gi|444789457|gb|ELX11005.1| FHA domain containing protein [Janthinobacterium sp. HH01]
Length = 191
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+++ +T+GR P R D+V+ VSG HA I D + DL STNGTF++ R+
Sbjct: 16 IQLSKERMTIGRHP-RNDIVLTHPAVSGDHAVIVTILDDSFLEDLHSTNGTFVNGHRI 72
>gi|301112573|ref|XP_002998057.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112351|gb|EEY70403.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 486
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQ-KKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
S+ V GR+ D+ + ++S HA +Q + +L + D+ ST+G F+++KR+++ V
Sbjct: 40 GSSYVVAGRMETVCDLALAHPSISRTHAALQFDEQGALFLYDIHSTHGCFVNKKRVQADV 99
Query: 145 VAVASPGSRITFGDT 159
G + FG++
Sbjct: 100 YVRLHIGDVLGFGES 114
>gi|271969255|ref|YP_003343451.1| FHA domain-containing protein [Streptosporangium roseum DSM 43021]
gi|270512430|gb|ACZ90708.1| FHA repeat-domain-containing protein-like protein
[Streptosporangium roseum DSM 43021]
Length = 181
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 88 TEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
T VGR D+V+ TVS +HA +++ + +V DL S NGT +++ RL A
Sbjct: 103 TRYVVGR-GSACDLVLADLTVSRVHAELRRDEEGWIVVDLGSLNGTRLNDWRLVGP--AK 159
Query: 148 ASPGSRITFGDTHLAMFRV 166
PG ++FGD MF V
Sbjct: 160 VRPGDVLSFGD---CMFLV 175
>gi|338533206|ref|YP_004666540.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337259302|gb|AEI65462.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 312
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
A + +GR E DMV+ VS HARI S+ + DL STNGTF++ ++++ +
Sbjct: 25 ADKHIVIGRSSE-LDMVLVEDMVSRKHARISFSDGSITIEDLGSTNGTFVNGEKVKQSRL 83
Query: 146 AVASPGSRITFGDTHLAM 163
G RI G + L +
Sbjct: 84 ---KEGDRILIGTSILKL 98
>gi|340793023|ref|YP_004758486.1| hypothetical protein CVAR_0066 [Corynebacterium variabile DSM
44702]
gi|340532933|gb|AEK35413.1| putative secreted protein [Corynebacterium variabile DSM 44702]
Length = 164
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
EVTVGR +V+ SG HAR+ ++G + DLDS NGTF+ +R+
Sbjct: 91 EVTVGR-SSGCTLVLEDDFASGTHARLIRRGPDWYLEDLDSRNGTFLAGQRI 141
>gi|300780109|ref|ZP_07089965.1| secreted protein [Corynebacterium genitalium ATCC 33030]
gi|300534219|gb|EFK55278.1| secreted protein [Corynebacterium genitalium ATCC 33030]
Length = 148
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+++GR + D V+ S HAR+ ++G V DLDS NGTF+D R+
Sbjct: 75 ELSLGR-ADNNDFVLGDDFASSRHARLFRRGSEWFVEDLDSRNGTFVDGIRI 125
>gi|239611770|gb|EEQ88757.1| serine/threonine-protein kinase chk2 [Ajellomyces dermatitidis
ER-3]
Length = 656
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 85 IASTEVTVGRLPER---ADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEK 138
+AS + T G L R D V+ + T+S H I K+GDS+ + + S+NGTFI+E
Sbjct: 171 LASQDHTGGYLIGRHSECDFVLDIPTISNRHCLIYNENKRGDSVAILEDLSSNGTFINEA 230
Query: 139 RLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
+ G IT D +FR KI
Sbjct: 231 IIGRNKRRELEDGDEITVLDEARFVFRYPKI 261
>gi|114563547|ref|YP_751060.1| FHA domain-containing protein [Shewanella frigidimarina NCIMB 400]
gi|114334840|gb|ABI72222.1| FHA domain containing protein [Shewanella frigidimarina NCIMB 400]
Length = 458
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 29/124 (23%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D + ++V +P+ P VSG HARI K+ D + DL STNG +++
Sbjct: 32 DTLTLGRSDVCDWHMPD------PEKVVSGTHARIIKRSDDFFIEDL-STNGLYVNR--- 81
Query: 141 RSGVVAVASPGSR----------ITFGDTHLAMFRVSKIDTVEAPSKTEESEEKGDSPPL 190
AV + G+ TFGD ++ +K+ + S + ++ D+PP+
Sbjct: 82 -----AVEALGANREHKIEHDDLFTFGDYEIS----AKLQMLNVTSNSHVQQDVHDAPPV 132
Query: 191 SSAK 194
++ +
Sbjct: 133 ATLQ 136
>gi|84623928|ref|YP_451300.1| hypothetical protein XOO_2271 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84367868|dbj|BAE69026.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 282
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 159 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 215
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 216 RHRFVVEVPR 225
>gi|338535861|ref|YP_004669195.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337261957|gb|AEI68117.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 555
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F ++ E +GR + + IP +VS H ++K G V+DL S NGT I+
Sbjct: 31 FALSEEEYVIGRATDNV-ICIPDTSVSRKHVMVRKVGGGWAVSDLGSGNGTLIN-----G 84
Query: 143 GVVAVASP---GSRITFGDTHL 161
V++ +P G IT GDT L
Sbjct: 85 DVISDETPLANGDVITLGDTEL 106
>gi|261201212|ref|XP_002627006.1| serine/threonine-protein kinase chk2 [Ajellomyces dermatitidis
SLH14081]
gi|239592065|gb|EEQ74646.1| serine/threonine-protein kinase chk2 [Ajellomyces dermatitidis
SLH14081]
Length = 668
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 85 IASTEVTVGRLPER---ADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEK 138
+AS + T G L R D V+ + T+S H I K+GDS+ + + S+NGTFI+E
Sbjct: 171 LASQDHTGGYLIGRHSECDFVLDIPTISNRHCLIYNENKRGDSVAILEDLSSNGTFINEA 230
Query: 139 RLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
+ G IT D +FR KI
Sbjct: 231 IIGRNKRRELEDGDEITVLDEARFVFRYPKI 261
>gi|427426001|ref|ZP_18916072.1| FHA domain protein [Acinetobacter baumannii WC-136]
gi|425697144|gb|EKU66829.1| FHA domain protein [Acinetobacter baumannii WC-136]
Length = 208
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 19/91 (20%)
Query: 84 EIASTEVTVGR-----LPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-- 136
EI E+ V R + AD+++ A +S HA + K +L V DL+S+NGTF++
Sbjct: 11 EITGQEINVDRDMLVGRHQDADVLLQAAEISRRHAALLLKDQALWVQDLNSSNGTFVNDI 70
Query: 137 ----EKRLRSGVV--------AVASPGSRIT 155
EK+L G + +V +P +IT
Sbjct: 71 RIEQEKQLHDGDIVQFASFKFSVLAPAQKIT 101
>gi|406879785|gb|EKD28289.1| hypothetical protein ACD_79C00352G0001 [uncultured bacterium]
Length = 533
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
E+ + +++GR + AD+V+ +VS LHA I+K+G ++ D +S NG F+++ R+
Sbjct: 18 ELKTHSLSLGR-GKTADVVLKDPSVSRLHASIRKEGKFFIIYDENSNNGVFVNDSRV 73
>gi|289749819|ref|ZP_06509197.1| transcriptional regulator embR [Mycobacterium tuberculosis T92]
gi|289690406|gb|EFD57835.1| transcriptional regulator embR [Mycobacterium tuberculosis T92]
Length = 313
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 226 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 284
Query: 143 GVVAVASPGSRITFGDTHLAMFRVS 167
V + G I D H F++S
Sbjct: 285 AV--TLNDGDHIRICD-HEFTFQIS 306
>gi|257069800|ref|YP_003156055.1| FHA domain-containing protein [Brachybacterium faecium DSM 4810]
gi|256560618|gb|ACU86465.1| FHA domain-containing protein [Brachybacterium faecium DSM 4810]
Length = 237
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 16 TLLTQLQGLRIK-AKKHRNL--GAIRAS-EADSSTTTTTTSTDVAAERWLLQPVGDGDTS 71
TLL +LQ + ++ A K R + GA+ S E D T+ ER + P D S
Sbjct: 75 TLLDELQRVLMEHADKQRYMFVGAVSVSLEQDDEVRAGRFETESRTERGSVAPATDAAQS 134
Query: 72 HIGFK--VPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLD 128
G + + + + VTV AD+++ VS H ++ + D +L+ TDL
Sbjct: 135 GSGGSPIIEIDGQQYLLTGPVTVIGRGGDADIILEDTGVSRHHLELRAEADGTLIATDLG 194
Query: 129 STNGTFIDEKRLRSGV 144
STNGTF+D +R+R+ V
Sbjct: 195 STNGTFVDGERIRTPV 210
>gi|187735232|ref|YP_001877344.1| FHA domain-containing protein [Akkermansia muciniphila ATCC
BAA-835]
gi|187425284|gb|ACD04563.1| FHA domain containing protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 198
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR E ++V+P +VSG HA +Q K ++ DL STNGT I+ L A G
Sbjct: 28 IGR-DEHCEIVLPFQSVSGEHALLQFKEGGYVLEDLGSTNGTKIN--GLTPMGAATLYDG 84
Query: 152 SRITFGDTHL 161
I GD L
Sbjct: 85 DEIALGDARL 94
>gi|289662406|ref|ZP_06483987.1| hypothetical protein XcampvN_04750 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667721|ref|ZP_06488796.1| hypothetical protein XcampmN_04229 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 269
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|220910808|ref|YP_002486117.1| FHA domain-containing protein [Arthrobacter chlorophenolicus A6]
gi|219857686|gb|ACL38028.1| FHA domain containing protein [Arthrobacter chlorophenolicus A6]
Length = 160
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+A++ V +GR E A +V+ SG HAR+ +G + DL STNGT++ +++L
Sbjct: 81 LPLAASPVLLGRAQE-ATLVLEDDYASGRHARLFPQGSRWFIEDLGSTNGTYLADQQLTR 139
Query: 143 GVVAVASPGSRITFGDTHLAM 163
+ PG + G T + +
Sbjct: 140 AL--PVEPGVPVRIGKTVIEL 158
>gi|444432280|ref|ZP_21227437.1| hypothetical protein GS4_21_00050 [Gordonia soli NBRC 108243]
gi|443886873|dbj|GAC69158.1| hypothetical protein GS4_21_00050 [Gordonia soli NBRC 108243]
Length = 154
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P RAD +V+ S HAR+ +GD V DL STNGT++D
Sbjct: 70 LANTRITLGAQPVLLGRADDSTLVLTDDYASERHARLSPRGDDWYVEDLGSTNGTYLDRG 129
Query: 139 RLRSGV 144
++ + V
Sbjct: 130 KVTTAV 135
>gi|358372999|dbj|GAA89599.1| serine/threonine-protein kinase Chk2 (cds1) [Aspergillus kawachii
IFO 4308]
Length = 643
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 92 VGRLPERADMVIPVATVSGLHARI---QKKGDSL-LVTDLDSTNGTFIDEKRLRSGVVAV 147
+GR PE D+VI + TVS HA + +KGD++ + DL STNGTF+++ +
Sbjct: 178 IGRHPE-CDLVINIPTVSNRHALVFSENRKGDAVAFLQDL-STNGTFVNDAMVGQNKHRE 235
Query: 148 ASPGSRITFGDTHLAMFRVSK 168
G +T D +FR +
Sbjct: 236 LEDGDEVTILDEARFVFRYPR 256
>gi|358447329|ref|ZP_09157854.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium casei UCMA
3821]
gi|356606698|emb|CCE56214.1| oxoglutarate dehydrogenase inhibitor [Corynebacterium casei UCMA
3821]
Length = 144
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 12/122 (9%)
Query: 42 ADSSTTTTTTSTDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADM 101
A SST T+T D + L V G + F + P T GR PE AD+
Sbjct: 30 AASSTETSTAGADNLPDGQALLVVKRGPNAGARFLLDQP--------TTTAGRHPE-ADI 80
Query: 102 VIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
+ TVS HA + G+ V D+ S NGT+++ + S V+ V G I G L
Sbjct: 81 FLDDVTVSRRHAEFRIDGEKFEVVDVGSLNGTYVNREPRNSQVLEV---GDEIQIGKFRL 137
Query: 162 AM 163
Sbjct: 138 VF 139
>gi|383641194|ref|ZP_09953600.1| ABC transporter ATP-binding protein [Streptomyces chartreusis NRRL
12338]
Length = 842
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S T+GR P+ D+V A VS HA + G S ++ D STNGTF+ +R+ +
Sbjct: 18 SRAYTLGRDPQ-GDVVFDDARVSWRHATVSFNGRSWVIEDHGSTNGTFVQGQRIHQMELG 76
Query: 147 VASPGSRITFGD 158
PGS + G+
Sbjct: 77 ---PGSAVNLGN 85
>gi|383807241|ref|ZP_09962801.1| transcriptional regulator [Candidatus Aquiluna sp. IMCC13023]
gi|383298595|gb|EIC91210.1| transcriptional regulator [Candidatus Aquiluna sp. IMCC13023]
Length = 139
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
GR PE AD+ + TVS H +I +KG + + DL S NGT++D R+
Sbjct: 66 GRHPE-ADIFLDDVTVSRKHVQISRKGSAFQLEDLGSMNGTYVDGDRV 112
>gi|241764835|ref|ZP_04762840.1| FHA domain containing protein [Acidovorax delafieldii 2AN]
gi|241365630|gb|EER60354.1| FHA domain containing protein [Acidovorax delafieldii 2AN]
Length = 217
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
E+ T+GR P D+VI +SG HA I G + + DL STNGT+++ K ++
Sbjct: 17 ELTKERTTLGRRPYN-DIVIDNLAISGEHAVIHMSGSDVEIEDLGSTNGTYVNAKAVK 73
>gi|449542769|gb|EMD33747.1| hypothetical protein CERSUDRAFT_125997 [Ceriporiopsis subvermispora
B]
Length = 673
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 47 TTTTTSTDVAAERWLLQPVGDGDTSHI-GFKVPM-PDAFEI----ASTEVTVGRLPERAD 100
T T ST A++ P+ D +H+ G+ +P P I + T+GR P+ +D
Sbjct: 15 TQATQSTQDASQSSQPNPLID---AHLWGYLIPCNPSVHRIDFIKTRPQYTIGRNPDHSD 71
Query: 101 MVIPVATVSGLHARIQKKGD-----SLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRIT 155
+ +S H RI G ++ V DL S+NGTF++ ++ G A+ G+ I
Sbjct: 72 CRLMGMKISNTHCRISWDGKEDRIAAITVHDL-SSNGTFVNGIKIGKGRHALLHDGNEIA 130
Query: 156 FG 157
FG
Sbjct: 131 FG 132
>gi|54022049|ref|YP_116291.1| hypothetical protein nfa850 [Nocardia farcinica IFM 10152]
gi|54013557|dbj|BAD54927.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 155
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A T +T+G P RAD +V+ S HAR+ +GD V DL STNGT++D
Sbjct: 71 LAGTRITLGTQPVLIGRADDSTLVLTDDYASTRHARLSPRGDDWYVEDLGSTNGTYLDRA 130
Query: 139 RLRSGV-VAVASP 150
++ + V V + +P
Sbjct: 131 KVTTAVRVPLGTP 143
>gi|392594135|gb|EIW83460.1| kinase-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 822
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 30 KHRNLGAIRASEADSSTTTTTTSTDVAAERW-LLQPVGDGDTSHIGFKVPMPDAFEIAST 88
+H A +++E D S +T DV W +LQP + D F++
Sbjct: 29 QHETQQATQSTE-DGSQSTEGGKNDV----WGVLQPCSQ--------SLNRIDLFKLQPV 75
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKG---DSLLVTDLD-STNGTFIDEKRLRSGV 144
V+VGR E ++V+P VS H +I+ G + VT D S+NGT+I+ +++ G
Sbjct: 76 -VSVGRNQEGNEVVLPGLKVSNKHCKIRWDGRTDEKSHVTVYDTSSNGTWINGQKIGKGK 134
Query: 145 VAVASPGSRITFG 157
+ G+ I FG
Sbjct: 135 SGILKDGNEIAFG 147
>gi|328875053|gb|EGG23418.1| putative protein serine/threonine kinase [Dictyostelium
fasciculatum]
Length = 547
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
+ +GRL + ++ I VS H R+ + DS+ + DL STNGT+++ K + G + +
Sbjct: 111 LVLGRL-KSCNVQIAELVVSAKHCRLFRNNDSIFIQDL-STNGTYLNGKPIGRGNLELIK 168
Query: 150 PGSRITF 156
G RI+
Sbjct: 169 NGDRISL 175
>gi|283781408|ref|YP_003372163.1| FHA domain-containing protein [Pirellula staleyi DSM 6068]
gi|283439861|gb|ADB18303.1| FHA domain containing protein [Pirellula staleyi DSM 6068]
Length = 151
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 18/122 (14%)
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS 121
L PVG GD P+P + T +TVGR E D+V+ VSG H ++ +
Sbjct: 5 LVPVGGGD--------PIP----LLKTTLTVGRR-ESCDVVLRFGNVSGQHCQLTVESGY 51
Query: 122 LLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDT-VEAPSKTEE 180
V DL+S NG ++ +R+ V PG I+ H + D P +E
Sbjct: 52 WFVQDLNSQNGVKVNGQRVSRKRV---DPGDEISMA-KHAYRLHYTPTDLGANGPPPADE 107
Query: 181 SE 182
+E
Sbjct: 108 TE 109
>gi|147782863|emb|CAN61301.1| hypothetical protein VITISV_011317 [Vitis vinifera]
Length = 285
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 102 VIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDE-----KRLRSGVVAVASPGSRITF 156
VIP VS +HARI K + +TDL S +GT+I + +R+ P I F
Sbjct: 195 VIPSPKVSKMHARISCKDGAFFLTDLQSEHGTWITDNVGRRQRVSPNFPTRFHPSEVIDF 254
Query: 157 GDTHLAMFRVSKIDT-VEAPSKTEESE 182
G + A FRV + T + +K EES+
Sbjct: 255 G-SEKASFRVKVVRTPPDNAAKNEESK 280
>gi|375136800|ref|YP_004997450.1| FHA domain-containing protein [Acinetobacter calcoaceticus PHEA-2]
gi|325124245|gb|ADY83768.1| FHA domain protein [Acinetobacter calcoaceticus PHEA-2]
Length = 208
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 19/91 (20%)
Query: 84 EIASTEVTVGR-----LPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-- 136
EI E+ V R + AD+++ A +S HA + K +L V DL+S+NGTF++
Sbjct: 11 EITGQEINVDRDMLVGRHQDADVLLQAAEISRRHAALLLKDQALWVQDLNSSNGTFVNDI 70
Query: 137 ----EKRLRSGVV--------AVASPGSRIT 155
EK+L G + +V +P +IT
Sbjct: 71 RIEQEKQLHDGDIVQFASFKFSVLAPAQKIT 101
>gi|401429007|ref|XP_003878986.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495235|emb|CBZ30539.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 410
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 104 PVATVSGLHA--RIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGSRITF 156
P+A +S + A I GD+ ++D +STNGTF+ + RL + SPG RI F
Sbjct: 42 PLAAISRMQAFVDIGANGDAW-ISDCNSTNGTFLGIRPGPGIRLEANRYYQLSPGCRIVF 100
Query: 157 GDTHLAMFRVSKIDTV-EAPSKTEESEEKGDSPPLSSAKS 195
GD V +T+ EAP + S SP S+ K+
Sbjct: 101 GDV------VCTFETLSEAPPTPQHSAHPLTSPSRSARKT 134
>gi|257068715|ref|YP_003154970.1| FHA domain-containing protein [Brachybacterium faecium DSM 4810]
gi|256559533|gb|ACU85380.1| FHA domain-containing protein [Brachybacterium faecium DSM 4810]
Length = 147
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF-----IDE 137
F + S GR P ++++ + TVS HA + GD LV DL S NGT+ +DE
Sbjct: 64 FLLDSETTVAGRHP-KSEIFLDDVTVSRKHAAFVRDGDGFLVRDLGSLNGTYVGKDRVDE 122
Query: 138 KRLRSG 143
RL +G
Sbjct: 123 ARLHAG 128
>gi|428300090|ref|YP_007138396.1| FHA domain-containing protein [Calothrix sp. PCC 6303]
gi|428236634|gb|AFZ02424.1| FHA domain containing protein [Calothrix sp. PCC 6303]
Length = 329
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D S+NGT+++ L G PG R+ G L F
Sbjct: 268 VSRIHADIRIEGDAYYIEDAGSSNGTYVNNLPLLPGNRHRLRPGDRVGLGKGDLVTF 324
>gi|118352925|ref|XP_001009733.1| FHA domain containing protein [Tetrahymena thermophila]
gi|89291500|gb|EAR89488.1| FHA domain containing protein [Tetrahymena thermophila SB210]
Length = 648
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGD-SLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
+G+ + D V+ T+S HA +Q K + + + DL S++GTF++ KRL S + P
Sbjct: 51 LGKYQDLCDFVLEHPTISRKHAIVQHKANGEIFIYDLGSSHGTFVNNKRLPSKIYHKLHP 110
Query: 151 GSRITFGDT 159
I F +
Sbjct: 111 FDSIRFASS 119
>gi|171056882|ref|YP_001789231.1| FHA domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774327|gb|ACB32466.1| FHA domain containing protein [Leptothrix cholodnii SP-6]
Length = 228
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
++ + T+GR P D+VI VSG HA +Q G + + D +STNGT+I+ + ++
Sbjct: 17 QLTKDKTTLGRRPYN-DIVIDNLAVSGEHAVLQMVGQDVYIEDQNSTNGTYINGRAVK 73
>gi|406574582|ref|ZP_11050312.1| FHA domain-containing protein [Janibacter hoylei PVAS-1]
gi|404556041|gb|EKA61513.1| FHA domain-containing protein [Janibacter hoylei PVAS-1]
Length = 149
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
F + TEVT GR PE +D+ + TVS HA ++ V D+ S NGT+++++R+
Sbjct: 67 FLLDDTEVTTGRGPE-SDIFLDDVTVSRKHAVFSREDQGFGVRDVGSLNGTYVNKERI 123
>gi|338813386|ref|ZP_08625515.1| FHA domain containing protein [Acetonema longum DSM 6540]
gi|337274745|gb|EGO63253.1| FHA domain containing protein [Acetonema longum DSM 6540]
Length = 261
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 84 EIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSG 143
+IA V +GRL E ++ + S LHA I + ++ D S NGT+I+E R+
Sbjct: 183 DIARQRVNIGRL-ESNELPLTDMNASRLHAYIILEEGKHVLNDAKSLNGTYINEHRI--- 238
Query: 144 VVAVASPGSRITFGDT 159
V V + G RI G+T
Sbjct: 239 VRKVLASGDRIKLGNT 254
>gi|298243618|ref|ZP_06967425.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
gi|297556672|gb|EFH90536.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
Length = 558
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 107 TVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
T+S +HA + G+S +TDL+STN T ++ KRL + G I+FG
Sbjct: 499 TISRVHAAFEHSGNSFTLTDLNSTNSTRVNGKRLEPDKATPLNDGDSISFG 549
>gi|21242395|ref|NP_641977.1| hypothetical protein XAC1645 [Xanthomonas axonopodis pv. citri str.
306]
gi|21107834|gb|AAM36513.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 269
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|347755886|ref|YP_004863450.1| serine phosphatase RsbU [Candidatus Chloracidobacterium
thermophilum B]
gi|347588404|gb|AEP12934.1| Serine phosphatase RsbU, regulator of sigma subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 568
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 75 FKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
F+VP+ S +T+GR R D+ + VS LHA I++ G+ ++ D S NGT+
Sbjct: 20 FEVPL------RSVRLTIGR-SSRNDLCLNDPFVSRLHAEIRRDGEFFVLYDSGSANGTY 72
Query: 135 IDEKRLRSGVVAVASPGSRITFGDTHL 161
+ +R+ S A G I G+T L
Sbjct: 73 HNGQRIDSS--AALQFGDVIRIGETEL 97
>gi|343927941|ref|ZP_08767407.1| hypothetical protein GOALK_099_00730 [Gordonia alkanivorans NBRC
16433]
gi|343762164|dbj|GAA14333.1| hypothetical protein GOALK_099_00730 [Gordonia alkanivorans NBRC
16433]
Length = 839
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P+ D+V+ S HA++ +G L++ DL S NGTF++ +R+ + A S G
Sbjct: 205 IGRTPDN-DIVVSDVLASRHHAQVSSRGGVLVIDDLGSVNGTFVNGRRVNN---APLSDG 260
Query: 152 SRITFGDTHLAM 163
+T G++ +
Sbjct: 261 DVVTIGNSDFVV 272
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S +T+GR P+ D+VI VS H I+ +G + + D+ STNG F +RL +
Sbjct: 19 SPRITLGREPDN-DIVINHPMVSRRHLAIEWRGAAWYLVDIGSTNGFFAGGRRLAE--LM 75
Query: 147 VASPGSRITFGDT 159
VA P +++ GD
Sbjct: 76 VAGP-TQVRLGDV 87
>gi|188576374|ref|YP_001913303.1| FHA domain-containing protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188520826|gb|ACD58771.1| FHA domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 269
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|418517859|ref|ZP_13084016.1| hypothetical protein MOU_13748 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410705442|gb|EKQ63915.1| hypothetical protein MOU_13748 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 269
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|418519885|ref|ZP_13085936.1| hypothetical protein WS7_02485 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704545|gb|EKQ63027.1| hypothetical protein WS7_02485 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 269
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQA---GDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|349574211|ref|ZP_08886169.1| hypothetical protein HMPREF9371_0674 [Neisseria shayeganii 871]
gi|348014297|gb|EGY53183.1| hypothetical protein HMPREF9371_0674 [Neisseria shayeganii 871]
Length = 576
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF-----IDEKRLRSGV 144
+ VGR AD+V+ + VS H R++ G +L V DL S NG+F +D RL++G
Sbjct: 394 IVVGR-SRDADVVLALPEVSARHVRLRYDGTALAVEDLGSRNGSFVNGRRVDNARLQAGD 452
Query: 145 VAVASPGSR 153
V P R
Sbjct: 453 VLRLGPDER 461
>gi|262193465|ref|YP_003264674.1| Fis family transcriptional regulator [Haliangium ochraceum DSM
14365]
gi|262076812|gb|ACY12781.1| sigma54 specific transcriptional regulator, Fis family [Haliangium
ochraceum DSM 14365]
Length = 500
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 100 DMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
D+V+ VSG H I + DLDS+NG F+ E R+R PG+ G T
Sbjct: 69 DLVLTDKAVSGTHFEIVADDAGYRLRDLDSSNGIFVGELRIRE---VYLQPGTVFRLGHT 125
Query: 160 HL 161
HL
Sbjct: 126 HL 127
>gi|124491165|gb|ABN12917.1| EmbR [Mycobacterium tuberculosis]
Length = 191
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 121 YPLQAAATRIGRLHDN-DIVVDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 179
Query: 143 GV 144
V
Sbjct: 180 AV 181
>gi|390951664|ref|YP_006415423.1| FHA domain-containing protein [Thiocystis violascens DSM 198]
gi|390428233|gb|AFL75298.1| FHA domain-containing protein [Thiocystis violascens DSM 198]
Length = 264
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQ----KKGDSLLVTDLDSTNGTFIDEKRLR-SGVVA 146
+GR+ E D+ +P +S HA++ G L + DLDS NGT+++++RLR S +A
Sbjct: 185 IGRM-EGVDLRLPDGCISRRHAKLSVSRSSSGPVLTLDDLDSANGTYVNQERLRASRCLA 243
Query: 147 VASPGSRITFGDTHL 161
V G I G+ L
Sbjct: 244 V---GDLIELGNVRL 255
>gi|308176639|ref|YP_003916045.1| RDD domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307744102|emb|CBT75074.1| RDD domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 360
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 49/122 (40%), Gaps = 23/122 (18%)
Query: 67 DGDTSHIGFKVPMPDAFEI---------ASTEVTVGRLPERADMVI---------PVATV 108
D D H + P+A + S + +GR P AD I P TV
Sbjct: 238 DADLGHTQIRSEAPEALHLLFDDSQCLEVSNSILLGRNPSYADGDIGVHLVAVDDPERTV 297
Query: 109 SGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGSRITFGDTHLAM 163
S H IQ DS+ VTD DS NG+ I +K L G A G + FGD + +
Sbjct: 298 SKTHLLIQPGVDSVWVTDRDSGNGSSIVDKDGNVRELVPGKPEQAMAGHVVYFGDRYFQV 357
Query: 164 FR 165
R
Sbjct: 358 ER 359
>gi|445447522|ref|ZP_21443762.1| FHA domain protein [Acinetobacter baumannii WC-A-92]
gi|445461801|ref|ZP_21448975.1| FHA domain protein [Acinetobacter baumannii OIFC047]
gi|444759097|gb|ELW83581.1| FHA domain protein [Acinetobacter baumannii WC-A-92]
gi|444770883|gb|ELW95020.1| FHA domain protein [Acinetobacter baumannii OIFC047]
Length = 209
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ VGR + AD+++ A +S HA + K +L V DL+S+NGTF+++ R+
Sbjct: 22 DMLVGR-HQDADLLLQAAEISRRHAALLLKDQALWVQDLNSSNGTFVNDMRIEQ 74
>gi|172062170|ref|YP_001809821.1| FHA domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171994687|gb|ACB65605.1| FHA domain containing protein [Burkholderia ambifaria MC40-6]
Length = 333
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR R D VI VS +HA I+ G + D S+NGT + LR G AV G
Sbjct: 22 GRDDARCDTVIRDGAVSRVHAHIRWVGGLWELHD-HSSNGTSVSGVALRDGEHAVLQRGD 80
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKT 178
I FG +A +RV DT++ P+ T
Sbjct: 81 VIRFGRAGIAPWRV---DTLDDPADT 103
>gi|407644486|ref|YP_006808245.1| EmbR family transcriptional regulator [Nocardia brasiliensis ATCC
700358]
gi|407307370|gb|AFU01271.1| EmbR family transcriptional regulator [Nocardia brasiliensis ATCC
700358]
Length = 372
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + T +GRLP+ D+V+ VS HA I G + L+ DL S NG ++D R+
Sbjct: 286 YAVTGTITRIGRLPDN-DIVLEHGKVSRHHAAILHNGLTYLIKDLLSANGVWVDGMRIVD 344
Query: 143 GVVAVASPGSRITFGDTHL 161
+ G+ I GD L
Sbjct: 345 S--EALTDGAEIRIGDYEL 361
>gi|256831698|ref|YP_003160425.1| FHA domain-containing protein [Jonesia denitrificans DSM 20603]
gi|256685229|gb|ACV08122.1| FHA domain containing protein [Jonesia denitrificans DSM 20603]
Length = 534
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 74 GFKVPMPDAFEIA----STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDS 129
G ++P+ I ++ + V LP ++ P VS HA+++ G+ +LVTDL+S
Sbjct: 431 GVRIPLDRTVLIGRAPQASRLPVHELPRLVNVASPNNDVSRTHAQVRIDGELVLVTDLNS 490
Query: 130 TNGTFIDE-----KRLRSGVVAVASPGSRITFGD 158
TNG + E +RL S G+ + GD
Sbjct: 491 TNGVLLTEPGQQPRRLHPDEPTPLSSGALVDLGD 524
>gi|158336013|ref|YP_001517187.1| ABC transporter ATP-binding protein [Acaryochloris marina
MBIC11017]
gi|158306254|gb|ABW27871.1| ABC transporter, ATP-binding protein [Acaryochloris marina
MBIC11017]
Length = 994
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 77 VPMPDAFEIASTEV-------TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDS 129
+P D E T V + GR P R VI VS HA+I K + ++ DL S
Sbjct: 219 IPQTDVIEQVETLVLRELKSLSFGRDP-RNTTVIDHPVVSRFHAQIGLKSGTWVIEDLHS 277
Query: 130 TNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
+NGT+++ ++LR+ PG I G H
Sbjct: 278 SNGTYVNGRQLRNP--QPLRPGDTIRIGPYHFVF 309
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNG-TF----IDE 137
F + +T+GR P+ D+VI + V+ HA++ + ++ + DLDS +G TF I E
Sbjct: 139 FPLNQETLTLGRHPQ-CDIVIDLPVVADRHAQLNWENETYTIRDLDSPHGLTFAGDRIQE 197
Query: 138 KRLRSG 143
K L+ G
Sbjct: 198 KALQDG 203
>gi|124491179|gb|ABN12924.1| EmbR [Mycobacterium tuberculosis]
Length = 199
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 129 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 187
Query: 143 GV 144
V
Sbjct: 188 AV 189
>gi|78047242|ref|YP_363417.1| hypothetical protein XCV1686 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035672|emb|CAJ23363.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 324
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 201 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWL---QAGDQVVFDA 257
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 258 RHRFVVEVPR 267
>gi|405375905|ref|ZP_11029922.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397085859|gb|EJJ17032.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 176
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Query: 61 LLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHA--RIQKK 118
LL + D D + F P D E+TVGR E D+++P +VS HA R
Sbjct: 59 LLAMLRDFDNLEVHFLQPSVDG-----EELTVGRT-EDCDLMVPDPSVSQHHATLRWNAT 112
Query: 119 GDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKI 169
V D +S NGTFI+ L G + FGD R +
Sbjct: 113 RGGFSVRDAESMNGTFINGAPLAYRAQVQLQDGDTLAFGDAQFLYLRAETV 163
>gi|425459138|ref|ZP_18838624.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9808]
gi|389823194|emb|CCI28786.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9808]
Length = 358
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + T+GR + D+VI +S HA +Q + GD L+ DL S NGTF++ +R+
Sbjct: 39 VGRSYWTIGRGKDN-DIVIKDHCISRNHAILQSTETGDFYLI-DLGSLNGTFVNGRRV-- 94
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
+ +ITFG T + +R + + + P E
Sbjct: 95 AIPVTIHNTDQITFGKTEVQFYRATPTNVGKQPRNLE 131
>gi|302336304|ref|YP_003801511.1| FHA domain-containing protein [Olsenella uli DSM 7084]
gi|301320144|gb|ADK68631.1| FHA domain containing protein [Olsenella uli DSM 7084]
Length = 1517
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD-THLAMFRV 166
VS HA ++ +G+SL V DL S NGTF++ + L V A +PG + D T LA RV
Sbjct: 136 VSARHAELKLEGESLSVCDLGSANGTFVNGQALTPHVPAALAPGDVVQVMDLTILAGKRV 195
>gi|162452681|ref|YP_001615048.1| hypothetical protein sce4405 [Sorangium cellulosum So ce56]
gi|161163263|emb|CAN94568.1| unnamed protein product [Sorangium cellulosum So ce56]
Length = 433
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
D +I + VGR P +V+ VS H ++ +G +LV DL S NGTF+ R+
Sbjct: 28 DPVKIGIAPIVVGRDPS-CGVVVDDPEVSSTHCDLRAEGPGVLVRDLGSKNGTFVSTVRI 86
Query: 141 RSGVVAVAS 149
R ++ A
Sbjct: 87 REAILTAAC 95
>gi|440783642|ref|ZP_20961255.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Clostridium pasteurianum DSM 525]
gi|440219385|gb|ELP58598.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Clostridium pasteurianum DSM 525]
Length = 776
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
+ T+ T+GR PE D+VI VS HA ++ ++ DL+STNG +++ + S V+
Sbjct: 33 SKTKYTIGRSPEN-DIVINSPIVSVKHAELEISDGFFVIRDLNSTNGIYVNGNKTNSAVL 91
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
EV +GR + D+VI + VS HA+I+ + + + DL+STNGT+++
Sbjct: 135 EVAIGRKSDN-DLVIFHSLVSKQHAKIKVYSNRVTIEDLNSTNGTYVN 181
>gi|440755289|ref|ZP_20934491.1| FHA domain protein [Microcystis aeruginosa TAIHU98]
gi|440175495|gb|ELP54864.1| FHA domain protein [Microcystis aeruginosa TAIHU98]
Length = 344
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + T+GR + D+VI +S HA +Q + GD L+ DL S NGTF++ +R+
Sbjct: 25 VGRSYWTIGRGKDN-DIVIKDHCISRNHAILQSTETGDFYLI-DLGSRNGTFVNGRRV-- 80
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
+ +ITFG T + +R + + + P E
Sbjct: 81 AIPVTIHNTDQITFGKTEVQFYRATPTNVGKQPRNLE 117
>gi|54022831|ref|YP_117073.1| ABC transporter ATP-binding protein [Nocardia farcinica IFM 10152]
gi|54014339|dbj|BAD55709.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
Length = 859
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 86 ASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+S VT+GR PE + + VS +HA + +G ++TD STNG F+D +RL
Sbjct: 22 SSQLVTLGRAPE-VTLFVDSPLVSRVHATLTWQGSGWVLTDNGSTNGVFVDARRL 75
>gi|340714475|ref|XP_003395754.1| PREDICTED: angiogenic factor with G patch and FHA domains 1-like
isoform 2 [Bombus terrestris]
Length = 543
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGT 133
K+ + F +A T ++GR + + +VIP +S HARI D + V DL S NGT
Sbjct: 280 KLKIGSLFFVAYTGGSIGREGDHS-VVIPDINISKHHARILYNEDKKIYEVIDLGSRNGT 338
Query: 134 FIDEKRL 140
F++ KRL
Sbjct: 339 FLNGKRL 345
>gi|322434241|ref|YP_004216453.1| protein serine/threonine phosphatase with GAF(s) sensor(s)
[Granulicella tundricola MP5ACTX9]
gi|321161968|gb|ADW67673.1| protein serine/threonine phosphatase with GAF(s) sensor(s)
[Granulicella tundricola MP5ACTX9]
Length = 540
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF-----IDEKRLRSG 143
E+T+GR + D+V+ VS HA + ++G++ D ST GTF I+ KRLR G
Sbjct: 24 EITLGR-ADGQDIVVREQCVSRRHAAVVREGEAHFAVDHQSTLGTFVNGVRIERKRLRPG 82
Query: 144 -VVAVASP-GSRITF 156
V+ + SP +RI F
Sbjct: 83 DVLQLGSPEATRIVF 97
>gi|406934701|gb|EKD68908.1| hypothetical protein ACD_47C00372G0002 [uncultured bacterium]
Length = 553
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
E T+GR PE + MV S LHAR+ + S V+D STNGT+++ K++R +A
Sbjct: 22 EYTLGRSPECSVMV-KSTIASRLHARLFFRDGSWRVSDNQSTNGTWLNGKKIRESAIA 78
>gi|69054057|gb|AAN63502.2|AF384103_1 zeaxanthin epoxidase [Triticum aestivum]
Length = 363
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 103 IPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGSRITFG 157
P+ VS +HA I K +TDL S +GT+ ++ RL P I FG
Sbjct: 274 FPLPQVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFG 333
Query: 158 DTHLAMFRVSKIDTV 172
AMFRV + T+
Sbjct: 334 SDKKAMFRVKVLSTL 348
>gi|417553902|ref|ZP_12204971.1| FHA domain protein [Acinetobacter baumannii Naval-81]
gi|417563132|ref|ZP_12214011.1| FHA domain protein [Acinetobacter baumannii OIFC137]
gi|421201144|ref|ZP_15658303.1| FHA domain protein [Acinetobacter baumannii OIFC109]
gi|421456917|ref|ZP_15906255.1| FHA domain protein [Acinetobacter baumannii IS-123]
gi|421634727|ref|ZP_16075338.1| FHA domain protein [Acinetobacter baumannii Naval-13]
gi|421802553|ref|ZP_16238502.1| FHA domain protein [Acinetobacter baumannii WC-A-694]
gi|395525714|gb|EJG13803.1| FHA domain protein [Acinetobacter baumannii OIFC137]
gi|395563176|gb|EJG24829.1| FHA domain protein [Acinetobacter baumannii OIFC109]
gi|400210621|gb|EJO41590.1| FHA domain protein [Acinetobacter baumannii IS-123]
gi|400390319|gb|EJP57366.1| FHA domain protein [Acinetobacter baumannii Naval-81]
gi|408703750|gb|EKL49132.1| FHA domain protein [Acinetobacter baumannii Naval-13]
gi|410414746|gb|EKP66542.1| FHA domain protein [Acinetobacter baumannii WC-A-694]
Length = 209
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
++ VGR + AD+++ A +S HA + K +L V DL+S+NGTF+++ R+
Sbjct: 22 DMLVGR-HQDADLLLQAAEISRRHAALLLKDQALWVQDLNSSNGTFVNDMRIEQ 74
>gi|383807853|ref|ZP_09963408.1| FHA domain protein [Rothia aeria F0474]
gi|383449317|gb|EID52259.1| FHA domain protein [Rothia aeria F0474]
Length = 161
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 109 SGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
SG HAR+ +G + DL STNGT++D +RL V PG+ G T + +
Sbjct: 107 SGRHARLFPQGSRWFLEDLGSTNGTYVDGQRLSR--ATVIEPGTEFRVGGTTMQL 159
>gi|425454555|ref|ZP_18834285.1| Adenylate cyclase [Microcystis aeruginosa PCC 9807]
gi|389804746|emb|CCI16019.1| Adenylate cyclase [Microcystis aeruginosa PCC 9807]
Length = 339
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
T+GR + A +VI +S HA +Q + GD L+ DL S NGTF++ +R+ +
Sbjct: 30 TIGRSKDNA-IVIKDQCISRNHAILQSTETGDFYLI-DLGSRNGTFVNGRRV--AIPVTI 85
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
RITFG T + +R + + + P E
Sbjct: 86 HDKDRITFGKTEVQFYRPTPTNIGKQPHNLE 116
>gi|297564165|ref|YP_003683138.1| FHA domain-containing protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848614|gb|ADH70632.1| FHA domain containing protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 255
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
M +FE+ + +GR + D+ + VS H I+ GD ++ D STNGTF++ +
Sbjct: 172 MQQSFELTTPVTLLGRGTD-CDLRLVDNGVSRHHVEIRLDGDEAILVDKGSTNGTFVNGQ 230
Query: 139 RLRSGVVAVASPGSRITFGDTHLAMFR 165
++R A GSRI+ G T + R
Sbjct: 231 QVRQ---ARLVDGSRISLGRTTMTFRR 254
>gi|227502280|ref|ZP_03932329.1| FHA domain protein [Corynebacterium accolens ATCC 49725]
gi|227077104|gb|EEI15067.1| FHA domain protein [Corynebacterium accolens ATCC 49725]
Length = 277
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + +GR AD+ +P VS HA I G+ ++ DL STNGT +++ + +
Sbjct: 191 YHVQEGSNIIGR-SNDADLRLPDTGVSRQHAEITWNGEDAVLVDLQSTNGTTVNDTPIDN 249
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDT 171
++A G IT G +H+ + R++ +D+
Sbjct: 250 WLLA---DGDVITMGHSHVEV-RITGLDS 274
>gi|289442705|ref|ZP_06432449.1| transcriptional regulator embR [Mycobacterium tuberculosis T46]
gi|289569276|ref|ZP_06449503.1| transcriptional regulator embR [Mycobacterium tuberculosis T17]
gi|289753343|ref|ZP_06512721.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
EAS054]
gi|386004261|ref|YP_005922540.1| transcriptional regulatory protein EMBR [Mycobacterium tuberculosis
RGTB423]
gi|289415624|gb|EFD12864.1| transcriptional regulator embR [Mycobacterium tuberculosis T46]
gi|289543030|gb|EFD46678.1| transcriptional regulator embR [Mycobacterium tuberculosis T17]
gi|289693930|gb|EFD61359.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
EAS054]
gi|380724749|gb|AFE12544.1| putative transcriptional regulatory protein EMBR [Mycobacterium
tuberculosis RGTB423]
Length = 388
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 301 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 359
Query: 143 GVVAVASPGSRITFGDTHLAMFRVS 167
V + G I D H F++S
Sbjct: 360 AV--TLNDGDHIRICD-HEFTFQIS 381
>gi|455644301|gb|EMF23403.1| ABC transporter ATP-binding protein [Streptomyces gancidicus BKS
13-15]
Length = 848
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
S T+GR P+ D+VI A VS HA I G S ++ D STNGTF+ +R+
Sbjct: 18 SRAYTLGRDPQ-GDVVIDDARVSWRHATISFNGHSWVIEDHGSTNGTFVQGQRI 70
>gi|16331866|ref|NP_442594.1| heterocyst to vegetative cell connection protein [Synechocystis sp.
PCC 6803]
gi|383323609|ref|YP_005384463.1| heterocyst-to-vegetative cell connection protein [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326778|ref|YP_005387632.1| heterocyst-to-vegetative cell connection protein [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492662|ref|YP_005410339.1| heterocyst-to-vegetative cell connection protein [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437930|ref|YP_005652655.1| heterocyst-to-vegetative cell connection protein [Synechocystis sp.
PCC 6803]
gi|451816018|ref|YP_007452470.1| heterocyst to vegetative cell connection protein [Synechocystis sp.
PCC 6803]
gi|1001785|dbj|BAA10665.1| heterocyst to vegetative cell connection protein [Synechocystis sp.
PCC 6803]
gi|339274963|dbj|BAK51450.1| heterocyst-to-vegetative cell connection protein homolog
[Synechocystis sp. PCC 6803]
gi|359272929|dbj|BAL30448.1| heterocyst-to-vegetative cell connection protein homolog
[Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276099|dbj|BAL33617.1| heterocyst-to-vegetative cell connection protein homolog
[Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279269|dbj|BAL36786.1| heterocyst-to-vegetative cell connection protein homolog
[Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960498|dbj|BAM53738.1| heterocyst to vegetative cell connectionprotein [Bacillus subtilis
BEST7613]
gi|451781987|gb|AGF52956.1| heterocyst to vegetative cell connection protein [Synechocystis sp.
PCC 6803]
Length = 210
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +G+ + D+ S NGT+++ L G + PG R+ G L F
Sbjct: 149 VSRVHADIRLEGNEYFLEDVGSANGTYVNHTALLPGNRHLLRPGDRLALGKGDLVTF 205
>gi|328723923|ref|XP_001942712.2| PREDICTED: hypothetical protein LOC100158843 [Acyrthosiphon pisum]
Length = 713
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGD-------SLLVTDLDSTNGTFIDEKRLRSG 143
T+GR R D+V+P VS LHA I G+ +V D STNGTF+D K+L +
Sbjct: 445 TIGRSTNR-DVVVPDDNVSKLHAEISFIGNVNKVGRGHYIVKDKGSTNGTFLDGKKL-TK 502
Query: 144 VVAVASP-----GSRITFGDT 159
+ + P GS +T GDT
Sbjct: 503 HSSSSEPRHLVHGSELTVGDT 523
>gi|256370911|ref|YP_003108735.1| FHA domain-containing protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256007495|gb|ACU53062.1| FHA domain containing protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 170
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 8/52 (15%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDT 159
VSG HA + K+G ++V DL STNGTF++ +R+ + R+T GD
Sbjct: 115 VSGHHAEVVKEGRRIIVRDLGSTNGTFVNGERVEGSM--------RVTRGDV 158
>gi|192359357|ref|YP_001980967.1| FHA domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190685522|gb|ACE83200.1| FHA domain protein [Cellvibrio japonicus Ueda107]
Length = 274
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 75 FKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
F+VP PD + +GR + D+VIP +S HA I +G+ L + DL S NGTF
Sbjct: 120 FQVP-PDK------SLVMGR-GNQCDIVIPGTHLSRRHAEICVEGNHLRIRDLGSANGTF 171
Query: 135 IDEKRLRSGVVAVASPGSRITFGDTHLAMFRVSKIDT 171
+++ ++ + A A+ G R+ + FR+ DT
Sbjct: 172 LNDVQISN---ATANNGDRLRLD---VYSFRIIAPDT 202
>gi|15608407|ref|NP_215783.1| Probable transcriptional regulatory protein EmbR [Mycobacterium
tuberculosis H37Rv]
gi|15840713|ref|NP_335750.1| AfsR/DnrI/RedD family transcriptional regulator [Mycobacterium
tuberculosis CDC1551]
gi|31792459|ref|NP_854952.1| transcriptional regulator EmbR [Mycobacterium bovis AF2122/97]
gi|121637195|ref|YP_977418.1| transcriptional regulatory protein embR [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148661054|ref|YP_001282577.1| transcriptional regulatory protein EmbR [Mycobacterium tuberculosis
H37Ra]
gi|148822484|ref|YP_001287238.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
F11]
gi|167969589|ref|ZP_02551866.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
H37Ra]
gi|224989670|ref|YP_002644357.1| transcriptional regulatory protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253799688|ref|YP_003032689.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN
1435]
gi|254231524|ref|ZP_04924851.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
C]
gi|254550274|ref|ZP_05140721.1| transcriptional regulator embR [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289446861|ref|ZP_06436605.1| transcriptional regulator embR [Mycobacterium tuberculosis CPHL_A]
gi|289573929|ref|ZP_06454156.1| transcriptional regulator embR [Mycobacterium tuberculosis K85]
gi|289745012|ref|ZP_06504390.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
02_1987]
gi|289757366|ref|ZP_06516744.1| transcriptional regulatory protein [Mycobacterium tuberculosis T85]
gi|289761419|ref|ZP_06520797.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
GM 1503]
gi|294994823|ref|ZP_06800514.1| transcriptional regulator embR [Mycobacterium tuberculosis 210]
gi|297633816|ref|ZP_06951596.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN
4207]
gi|297730802|ref|ZP_06959920.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN
R506]
gi|298524770|ref|ZP_07012179.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
94_M4241A]
gi|306802964|ref|ZP_07439632.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu008]
gi|313658134|ref|ZP_07815014.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN
V2475]
gi|340626282|ref|YP_004744734.1| putative transcriptional regulatory protein EMBR [Mycobacterium
canettii CIPT 140010059]
gi|375296929|ref|YP_005101196.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN
4207]
gi|378771029|ref|YP_005170762.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Mexico]
gi|385998050|ref|YP_005916348.1| transcriptional regulatory protein EMBR [Mycobacterium tuberculosis
CTRI-2]
gi|392385961|ref|YP_005307590.1| embR [Mycobacterium tuberculosis UT205]
gi|392433139|ref|YP_006474183.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN 605]
gi|397673107|ref|YP_006514642.1| transcriptional regulator embR [Mycobacterium tuberculosis H37Rv]
gi|424803613|ref|ZP_18229044.1| transcriptional regulator embR [Mycobacterium tuberculosis W-148]
gi|433626367|ref|YP_007259996.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140060008]
gi|433630373|ref|YP_007264001.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140070010]
gi|433634330|ref|YP_007267957.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140070017]
gi|433641419|ref|YP_007287178.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140070008]
gi|449063333|ref|YP_007430416.1| transcriptional regulator embR [Mycobacterium bovis BCG str. Korea
1168P]
gi|54037035|sp|P66800.1|EMBR_MYCBO RecName: Full=Transcriptional regulatory protein EmbR
gi|54041036|sp|P66799.1|EMBR_MYCTU RecName: Full=Transcriptional regulatory protein EmbR
gi|88192977|pdb|2FEZ|A Chain A, Mycobacterium Tuberculosis Embr
gi|88192978|pdb|2FF4|A Chain A, Mycobacterium Tuberculosis Embr In Complex With Low
Affinity Phosphopeptide
gi|88192979|pdb|2FF4|B Chain B, Mycobacterium Tuberculosis Embr In Complex With Low
Affinity Phosphopeptide
gi|13880902|gb|AAK45564.1| transcriptional regulator, AfsR/DnrI/RedD family [Mycobacterium
tuberculosis CDC1551]
gi|31618048|emb|CAD94159.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN EMBR [Mycobacterium
bovis AF2122/97]
gi|121492842|emb|CAL71313.1| Probable transcriptional regulatory protein embR [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124600583|gb|EAY59593.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
C]
gi|148505206|gb|ABQ73015.1| putative transcriptional regulatory protein EmbR [Mycobacterium
tuberculosis H37Ra]
gi|148721011|gb|ABR05636.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
F11]
gi|224772783|dbj|BAH25589.1| putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253321191|gb|ACT25794.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN
1435]
gi|289419819|gb|EFD17020.1| transcriptional regulator embR [Mycobacterium tuberculosis CPHL_A]
gi|289538360|gb|EFD42938.1| transcriptional regulator embR [Mycobacterium tuberculosis K85]
gi|289685540|gb|EFD53028.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
02_1987]
gi|289708925|gb|EFD72941.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
GM 1503]
gi|289712930|gb|EFD76942.1| transcriptional regulatory protein [Mycobacterium tuberculosis T85]
gi|298494564|gb|EFI29858.1| transcriptional regulatory protein embR [Mycobacterium tuberculosis
94_M4241A]
gi|308350338|gb|EFP39189.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu008]
gi|326902889|gb|EGE49822.1| transcriptional regulator embR [Mycobacterium tuberculosis W-148]
gi|328459434|gb|AEB04857.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN
4207]
gi|340004472|emb|CCC43615.1| putative transcriptional regulatory protein EMBR [Mycobacterium
canettii CIPT 140010059]
gi|341601213|emb|CCC63886.1| probable transcriptional regulatory protein embR [Mycobacterium
bovis BCG str. Moreau RDJ]
gi|344219096|gb|AEM99726.1| transcriptional regulatory protein EMBR [Mycobacterium tuberculosis
CTRI-2]
gi|356593350|gb|AET18579.1| Putative transcriptional regulatory protein [Mycobacterium bovis
BCG str. Mexico]
gi|378544512|emb|CCE36786.1| embR [Mycobacterium tuberculosis UT205]
gi|379027485|dbj|BAL65218.1| transcriptional regulator [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|392054548|gb|AFM50106.1| transcriptional regulator embR [Mycobacterium tuberculosis KZN 605]
gi|395138012|gb|AFN49171.1| transcriptional regulator embR [Mycobacterium tuberculosis H37Rv]
gi|432153973|emb|CCK51200.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140060008]
gi|432157967|emb|CCK55249.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140070008]
gi|432161966|emb|CCK59325.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140070010]
gi|432165923|emb|CCK63409.1| Putative transcriptional regulatory protein EmbR [Mycobacterium
canettii CIPT 140070017]
gi|440580742|emb|CCG11145.1| putative TRANSCRIPTIONAL REGULATORY protein EMBR [Mycobacterium
tuberculosis 7199-99]
gi|444894767|emb|CCP44023.1| Probable transcriptional regulatory protein EmbR [Mycobacterium
tuberculosis H37Rv]
gi|449031841|gb|AGE67268.1| transcriptional regulator embR [Mycobacterium bovis BCG str. Korea
1168P]
Length = 388
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 301 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 359
Query: 143 GVVAVASPGSRITFGDTHLAMFRVS 167
V + G I D H F++S
Sbjct: 360 AV--TLNDGDHIRICD-HEFTFQIS 381
>gi|84496382|ref|ZP_00995236.1| hypothetical protein JNB_02645 [Janibacter sp. HTCC2649]
gi|84383150|gb|EAP99031.1| hypothetical protein JNB_02645 [Janibacter sp. HTCC2649]
Length = 164
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVAS 149
V+ GR P+ +D+ + TVS HA ++ D +V D+ S NGT+++ +R+ V+
Sbjct: 89 VSSGRHPD-SDIFLDDVTVSRQHATFERVQDQFVVKDVGSLNGTYVNRERIDESVLQT-- 145
Query: 150 PGSRITFGDTHLAMF 164
G + G L +
Sbjct: 146 -GDEVQIGKYRLVFY 159
>gi|262375158|ref|ZP_06068392.1| FHA domain-containing protein [Acinetobacter lwoffii SH145]
gi|262310171|gb|EEY91300.1| FHA domain-containing protein [Acinetobacter lwoffii SH145]
Length = 219
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
++ VGR + AD+V+ A +S HA K D+L V DL S+NGTF+++ ++ +
Sbjct: 22 DMLVGRH-QAADIVLQAAEISRKHAAFLLKDDALWVQDLGSSNGTFVNDVQIAQE--TLL 78
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESEEK 184
+ F ++ + TVE P++ E + EK
Sbjct: 79 KQDDIVQFASLKFSVMAPAA--TVEVPAEIEATAEK 112
>gi|308231799|ref|ZP_07413772.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu001]
gi|308370010|ref|ZP_07419989.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu002]
gi|308370677|ref|ZP_07422309.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu003]
gi|308371925|ref|ZP_07426673.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu004]
gi|308373095|ref|ZP_07430979.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu005]
gi|308374272|ref|ZP_07435386.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu006]
gi|308375421|ref|ZP_07443822.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu007]
gi|308377681|ref|ZP_07480014.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu009]
gi|308378891|ref|ZP_07484206.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu010]
gi|308380030|ref|ZP_07488428.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu011]
gi|308399325|ref|ZP_07492941.2| transcriptional regulator embR [Mycobacterium tuberculosis SUMu012]
gi|385990697|ref|YP_005908995.1| transcriptional regulator embR [Mycobacterium tuberculosis
CCDC5180]
gi|385994296|ref|YP_005912594.1| transcriptional regulator embR [Mycobacterium tuberculosis
CCDC5079]
gi|422812250|ref|ZP_16860638.1| transcriptional regulator embR [Mycobacterium tuberculosis
CDC1551A]
gi|424947006|ref|ZP_18362702.1| transcriptional regulatory protein [Mycobacterium tuberculosis
NCGM2209]
gi|308216055|gb|EFO75454.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu001]
gi|308325613|gb|EFP14464.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu002]
gi|308331223|gb|EFP20074.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu003]
gi|308335039|gb|EFP23890.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu004]
gi|308338847|gb|EFP27698.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu005]
gi|308342532|gb|EFP31383.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu006]
gi|308346397|gb|EFP35248.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu007]
gi|308354968|gb|EFP43819.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu009]
gi|308358915|gb|EFP47766.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu010]
gi|308362878|gb|EFP51729.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu011]
gi|308366511|gb|EFP55362.1| transcriptional regulator embR [Mycobacterium tuberculosis SUMu012]
gi|323720223|gb|EGB29322.1| transcriptional regulator embR [Mycobacterium tuberculosis
CDC1551A]
gi|339294250|gb|AEJ46361.1| transcriptional regulator embR [Mycobacterium tuberculosis
CCDC5079]
gi|339297890|gb|AEJ50000.1| transcriptional regulator embR [Mycobacterium tuberculosis
CCDC5180]
gi|358231521|dbj|GAA45013.1| transcriptional regulatory protein [Mycobacterium tuberculosis
NCGM2209]
Length = 382
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 295 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 353
Query: 143 GVVAVASPGSRITFGDTHLAMFRVS 167
V + G I D H F++S
Sbjct: 354 AV--TLNDGDHIRICD-HEFTFQIS 375
>gi|425438865|ref|ZP_18819203.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9717]
gi|389716743|emb|CCH99045.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9717]
Length = 339
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
T+GR + A +VI +S HA +Q + GD L+ DL S NGTF++ +R+ +
Sbjct: 30 TIGRSKDNA-IVIKDQCISRNHAILQSTETGDFYLI-DLGSRNGTFVNGRRV--AIPVTI 85
Query: 149 SPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
RITFG T + +R + + + P E
Sbjct: 86 HDKDRITFGKTEVQFYRPTPTNIGKQPHNLE 116
>gi|354564784|ref|ZP_08983960.1| Forkhead-associated protein [Fischerella sp. JSC-11]
gi|353549910|gb|EHC19349.1| Forkhead-associated protein [Fischerella sp. JSC-11]
Length = 216
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
+ +GR P R D+V+ TVSGLH I + L+ +L N +D ++L G + +
Sbjct: 31 IRIGRDPVRCDIVLSHPTVSGLHVEIFFNAQQQRFLMKNLREQNPPLVDGQKLVQGEIPL 90
Query: 148 ASPGSRITFGDTHLAMFRVS 167
GS I G L + +S
Sbjct: 91 RE-GSIIYLGQQLLKVTEIS 109
>gi|124491175|gb|ABN12922.1| EmbR [Mycobacterium tuberculosis]
Length = 200
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 130 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 188
Query: 143 GV 144
V
Sbjct: 189 AV 190
>gi|121711199|ref|XP_001273215.1| serine/threonine-protein kinase chk2 (cds1) [Aspergillus clavatus
NRRL 1]
gi|119401366|gb|EAW11789.1| serine/threonine-protein kinase chk2 (cds1) [Aspergillus clavatus
NRRL 1]
Length = 647
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARI---QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVA 148
VGR PE D+VI + T+S H I K GDS+ + + S+NGTF+++ +
Sbjct: 182 VGRHPE-CDLVINIPTISNRHFLIYTENKNGDSIAIVEDLSSNGTFVNDAIIGRNKHREL 240
Query: 149 SPGSRITFGDTHLAMFRVSK 168
G IT D +FR +
Sbjct: 241 EDGDEITILDEARFVFRYPQ 260
>gi|444915841|ref|ZP_21235966.1| FHA domain containing protein [Cystobacter fuscus DSM 2262]
gi|444712835|gb|ELW53748.1| FHA domain containing protein [Cystobacter fuscus DSM 2262]
Length = 299
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
I +GR + D+VI VS HA I ++GD + DL S+NGT+ +++R++
Sbjct: 222 ITKERFVIGR-GKHCDLVINSGKVSREHAVIVREGDDFFIEDLGSSNGTWFNKQRIKRRK 280
Query: 145 VA------VASPGSRITF 156
V + S R+T+
Sbjct: 281 VEDGDEYFICSERVRLTY 298
>gi|386774509|ref|ZP_10096887.1| FHA domain-containing protein [Brachybacterium paraconglomeratum
LC44]
Length = 173
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF-----IDE 137
F + S GR P ++++ + TVS HA + GD LV DL S NGT+ +DE
Sbjct: 90 FLLDSETTIAGRHP-KSEIFLDDVTVSRKHAAFVRDGDGFLVRDLGSLNGTYVGKDRVDE 148
Query: 138 KRLRSG 143
RL +G
Sbjct: 149 ARLHAG 154
>gi|306834842|ref|ZP_07467904.1| FHA domain protein [Corynebacterium accolens ATCC 49726]
gi|304569279|gb|EFM44782.1| FHA domain protein [Corynebacterium accolens ATCC 49726]
Length = 277
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + +GR AD+ +P VS HA I G+ ++ DL STNGT +++ + +
Sbjct: 191 YHVQEGSNIIGR-SNDADLRLPDTGVSRQHAEITWNGEDAVLVDLQSTNGTTVNDTPIDN 249
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDT 171
++A G IT G +H+ + R++ +D+
Sbjct: 250 WLLA---DGDVITMGHSHVEV-RITGLDS 274
>gi|444915639|ref|ZP_21235770.1| Adenylate cyclase [Cystobacter fuscus DSM 2262]
gi|444713362|gb|ELW54265.1| Adenylate cyclase [Cystobacter fuscus DSM 2262]
Length = 536
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
T+GR E + V+ + ++S HA + ++ + +L+TDLDS NGT +DE RL
Sbjct: 23 TIGRTQESSLCVLHM-SLSRRHALLVREAERVLLTDLDSKNGTLVDEVRL 71
>gi|395774137|ref|ZP_10454652.1| ABC transporter ATP-binding protein [Streptomyces acidiscabies
84-104]
Length = 758
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
VGR P +D+V+ + VS HA ++ +GD V D STNGTF D R+ + V PG
Sbjct: 32 VGRDP-LSDIVLDDSRVSWHHAVLRPEGDHWTVEDEHSTNGTFTDGHRVHAEDVG---PG 87
Query: 152 SRITFG 157
S + FG
Sbjct: 88 SVLCFG 93
>gi|425449493|ref|ZP_18829332.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
7941]
gi|389763767|emb|CCI09763.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
7941]
Length = 358
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + T+GR + D+VI +S HA +Q + GD L+ DL S NGTF++ +R+
Sbjct: 39 VGRSYWTIGRGKDN-DIVIKDHCISRNHAILQSTETGDFYLI-DLGSRNGTFVNGRRV-- 94
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
+ +ITFG T + +R + + + P E
Sbjct: 95 AIPVTIHNTDQITFGKTEVQFYRATPTNVGKQPRNLE 131
>gi|339631335|ref|YP_004722977.1| transcriptional regulator [Mycobacterium africanum GM041182]
gi|339330691|emb|CCC26360.1| putative transcriptional regulatory protein EMBR [Mycobacterium
africanum GM041182]
Length = 388
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 301 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 359
Query: 143 GVVAVASPGSRITFGDTHLAMFRVS 167
V + G I D H F++S
Sbjct: 360 AV--TLNDGDHIRICD-HEFTFQIS 381
>gi|380011443|ref|XP_003689815.1| PREDICTED: LOW QUALITY PROTEIN: angiogenic factor with G patch and
FHA domains 1-like [Apis florea]
Length = 531
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGT 133
K+ + F +A T ++GR + + +VIP +S HAR D + +TDL S NGT
Sbjct: 268 KLKVGSLFLVAYTGGSIGREGDHS-VVIPDINISKQHARFLYNEDKKIYEITDLGSRNGT 326
Query: 134 FIDEKRL 140
F++ KRL
Sbjct: 327 FLNGKRL 333
>gi|124491163|gb|ABN12916.1| EmbR [Mycobacterium tuberculosis]
Length = 207
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 137 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 195
Query: 143 GV 144
V
Sbjct: 196 AV 197
>gi|409392283|ref|ZP_11243864.1| putative ABC transporter permease/ATP-binding protein [Gordonia
rubripertincta NBRC 101908]
gi|403197883|dbj|GAB87098.1| putative ABC transporter permease/ATP-binding protein [Gordonia
rubripertincta NBRC 101908]
Length = 838
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPG 151
+GR P+ D+V+ S HA++ +G L++ DL S NGTF++ +R+ + A S G
Sbjct: 204 IGRTPDN-DIVVSDVLASRHHAQVSSRGGVLVIDDLGSVNGTFVNGRRVNN---APLSDG 259
Query: 152 SRITFGDTHLAM 163
+T G++ +
Sbjct: 260 DVVTIGNSDFVV 271
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S +T+GR P+ D+VI VS H I+ +G + + D+ STNG F +R+ +VA
Sbjct: 19 SPRITLGREPDN-DIVINHPMVSRRHLAIEWRGTAWYLVDIGSTNGFFAGGRRMAEMIVA 77
>gi|326317029|ref|YP_004234701.1| forkhead-associated protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373865|gb|ADX46134.1| Forkhead-associated protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 320
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASP 150
T GR P+ V+ A VS LHA ++ G V D S NGT +D RL+ +
Sbjct: 20 TFGRHPDSCRTVLQEADVSKLHAIVRWSGMRWEVAD-QSRNGTLLDNARLQPAHWHGLAE 78
Query: 151 GSRITFGDTHLAMF 164
GS I FG + A++
Sbjct: 79 GSEIRFGASAAAVW 92
>gi|429731513|ref|ZP_19266140.1| FHA domain protein [Corynebacterium durum F0235]
gi|429145430|gb|EKX88518.1| FHA domain protein [Corynebacterium durum F0235]
Length = 160
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
EV +GR P+ V+ S HAR+ K G V DLDS NGTF+ R+
Sbjct: 87 EVVMGRSPQ-CTFVVGDDFASARHARLFKHGSEWFVEDLDSRNGTFVGGYRI 137
>gi|404422103|ref|ZP_11003802.1| FHA domain-containing protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403658093|gb|EJZ12842.1| FHA domain-containing protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 155
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 69 DTSHIGFKVPMPDAFEIASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSL 122
D HI ++ + + +A T +T+G P RAD +V+ S HAR+ +G
Sbjct: 56 DKRHIARQLVVTEG-ALAGTRITLGAQPVLIGRADDSTLVLTDDYASTRHARLSPRGSEW 114
Query: 123 LVTDLDSTNGTFIDEKRLRSGV-VAVASP 150
V DL STNGT++D ++ + V V++ +P
Sbjct: 115 YVEDLGSTNGTYLDRAKVTTAVRVSIGTP 143
>gi|359425043|ref|ZP_09216146.1| hypothetical protein GOAMR_43_00210 [Gordonia amarae NBRC 15530]
gi|358239623|dbj|GAB05728.1| hypothetical protein GOAMR_43_00210 [Gordonia amarae NBRC 15530]
Length = 150
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 85 IASTEVTVGRLP----ERAD--MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A+T +T+G P AD +V+ S HAR+ ++GD V DL STNGT++D
Sbjct: 66 LANTRITLGAQPVLMGRAADSTLVLTDDYASERHARLSRRGDDWYVEDLGSTNGTYLDRA 125
Query: 139 RLRSGV 144
++ + V
Sbjct: 126 KVTTAV 131
>gi|384419792|ref|YP_005629152.1| FHA domain-containing protein [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353462705|gb|AEQ96984.1| FHA domain protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 270
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWL---QAGDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|262195593|ref|YP_003266802.1| diguanylate cyclase [Haliangium ochraceum DSM 14365]
gi|262078940|gb|ACY14909.1| diguanylate cyclase [Haliangium ochraceum DSM 14365]
Length = 294
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
AD+ + VS H R+ GDS+LV DL STNGT+I+++
Sbjct: 55 ADIRLEQEAVSRNHCRLFNTGDSVLVRDLGSTNGTYINDR 94
>gi|124491173|gb|ABN12921.1| EmbR [Mycobacterium tuberculosis]
Length = 195
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 125 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 183
Query: 143 GV 144
V
Sbjct: 184 AV 185
>gi|108757744|ref|YP_633056.1| Fis family transcriptional regulator [Myxococcus xanthus DK 1622]
gi|108461624|gb|ABF86809.1| sigma-54 dependent transcriptional regulator, Fis family
[Myxococcus xanthus DK 1622]
Length = 459
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
D+V+ ATVS H +++ L++ D S NGTF+D +++ V A + G ++ G
Sbjct: 55 CDLVLTDATVSRRHLEVERTARGLMLRDTGSRNGTFLDGRQV---VQAYLTSGDKVELGK 111
Query: 159 THLAM 163
T L++
Sbjct: 112 TKLSV 116
>gi|400974461|ref|ZP_10801692.1| hypothetical protein SPAM21_00750 [Salinibacterium sp. PAMC 21357]
Length = 169
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 91 TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVV 145
TVGR PE AD+ + TVS H ++G S V DL S NGT++ R+ S V
Sbjct: 87 TVGRHPE-ADIFLDDVTVSRRHVEFLRQGTSFDVKDLGSLNGTYLGGDRIESTAV 140
>gi|383763312|ref|YP_005442294.1| hypothetical protein CLDAP_23570 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383580|dbj|BAM00397.1| hypothetical protein CLDAP_23570 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 213
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+ E++ TVGR E A + + S HA I + V DL S NG FID KRL
Sbjct: 17 EEIELSQEVTTVGRAAE-AGVRLEDPYASRRHAEILRLEQGYQVRDLHSKNGVFIDGKRL 75
Query: 141 RSGVVAVASPGSRITFGDTHL 161
G A + G+ + F T
Sbjct: 76 EPGGSAWLTDGAEVQFASTRF 96
>gi|328776632|ref|XP_394532.4| PREDICTED: angiogenic factor with G patch and FHA domains 1-like
[Apis mellifera]
Length = 545
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGT 133
K+ + F +A T ++GR + + +VIP +S HAR D + +TDL S NGT
Sbjct: 282 KLKVGSLFLVAYTGGSIGREGDHS-VVIPDINISKQHARFLYNEDKKIYEITDLGSRNGT 340
Query: 134 FIDEKRL 140
F++ KRL
Sbjct: 341 FLNGKRL 347
>gi|326533862|dbj|BAJ93704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 695
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 60 WLLQPVGDGDTSHIGFKVPMPDAFEIASTE---VTVGRLPERAD----MVIPVATVSGLH 112
W L P+ GD S + + E +++G P+ ++ + +P+ VS +H
Sbjct: 563 WYLFPMSSGDDSAL-------QPIRLIRDEQRTLSIGSKPDPSNSDSSLSLPLPQVSEIH 615
Query: 113 ARIQKKGDSLLVTDLDSTNGTFIDEK-----RLRSGVVAVASPGSRITFGDTHLAMFRV 166
A I K +TDL S +GT+ ++ RL P I FG AMFRV
Sbjct: 616 ATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRV 674
>gi|301095910|ref|XP_002897054.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108483|gb|EEY66535.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 526
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 79 MPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+PD F+++ + +GR+P R+D++IP +S LH I+ G S G +++ K
Sbjct: 28 LPDLFDLSRSMHRIGRVPNRSDLIIPKKYISTLHCIIRLHG---------SRYGLWVNRK 78
Query: 139 RLRSGVVAVASPGSRITFGD 158
++ G I F D
Sbjct: 79 KVGIRRKVQLKKGYVIHFAD 98
>gi|453078416|ref|ZP_21981147.1| membrane protein [Rhodococcus triatomae BKS 15-14]
gi|452757172|gb|EME15579.1| membrane protein [Rhodococcus triatomae BKS 15-14]
Length = 154
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 85 IASTEVTVGRLP---ERAD---MVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEK 138
+A T +T+G P RAD +V+ S HARI +G V DL STNGT++D
Sbjct: 70 LAGTRITLGTQPVLIGRADDSTLVLTDDYASTRHARISPRGTDWYVEDLGSTNGTYLDRA 129
Query: 139 RLRSGV-VAVASP 150
R+ + V V + +P
Sbjct: 130 RVTTAVRVPLGTP 142
>gi|427420229|ref|ZP_18910412.1| FHA domain-containing protein [Leptolyngbya sp. PCC 7375]
gi|425762942|gb|EKV03795.1| FHA domain-containing protein [Leptolyngbya sp. PCC 7375]
Length = 251
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
VS +HA I+ +GD + D+ S+NGT+I+ L G PG RI G
Sbjct: 190 VSRVHANIRIEGDVYYIEDVGSSNGTYINNLPLAVGNRHRLRPGDRIALG 239
>gi|17231576|ref|NP_488124.1| hypothetical protein all4084 [Nostoc sp. PCC 7120]
gi|17133219|dbj|BAB75783.1| all4084 [Nostoc sp. PCC 7120]
Length = 193
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 90 VTVGRLPERADMVIPVATVSGLHARI--QKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAV 147
V +GR P R D+V+ TVSGLH I + + + +L S N +D ++L G +
Sbjct: 31 VRIGRDPLRCDIVLTNPTVSGLHVEIFFHSQQQNFYIRNLRSQNPPLVDGQQLIQGEKPL 90
Query: 148 ASPGSRITFGDTHL 161
GS I G L
Sbjct: 91 NQ-GSIIYLGQAQL 103
>gi|345872524|ref|ZP_08824457.1| FHA domain containing protein [Thiorhodococcus drewsii AZ1]
gi|343918772|gb|EGV29534.1| FHA domain containing protein [Thiorhodococcus drewsii AZ1]
Length = 406
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 52 STDVAAERWLLQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGL 111
S D A E +P +G + + AF++ VT+GR + D+ I +S
Sbjct: 293 SRDTAVEAAAAKPSANGSIPTLILEFREDSAFQLDQETVTIGRATDN-DICIRDLRISRY 351
Query: 112 HARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA----VASPGSRITFGDTH 160
HA++ + + DL STNG +++++R++ ++ + RI F + H
Sbjct: 352 HAKLTTSRKGISIEDLGSTNGVYVNKERVKVRLLQDGDLIGIDEHRIRFENRH 404
>gi|340714473|ref|XP_003395753.1| PREDICTED: angiogenic factor with G patch and FHA domains 1-like
isoform 1 [Bombus terrestris]
Length = 529
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 76 KVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLL--VTDLDSTNGT 133
K+ + F +A T ++GR + + +VIP +S HARI D + V DL S NGT
Sbjct: 266 KLKIGSLFFVAYTGGSIGREGDHS-VVIPDINISKHHARILYNEDKKIYEVIDLGSRNGT 324
Query: 134 FIDEKRL 140
F++ KRL
Sbjct: 325 FLNGKRL 331
>gi|320102040|ref|YP_004177631.1| forkhead-associated protein [Isosphaera pallida ATCC 43644]
gi|319749322|gb|ADV61082.1| Forkhead-associated protein [Isosphaera pallida ATCC 43644]
Length = 564
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 108 VSGLHARIQ---KKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHL 161
+SG HARI + G+S +TDL+ + GTF++ +RL +G V G I G L
Sbjct: 48 MSGRHARIDPPAQPGESPRLTDLEGSTGTFVNRQRLLAGQVRPLKAGDLIQLGPVQL 104
>gi|157273352|gb|ABV27251.1| FHA domain containing protein [Candidatus Chloracidobacterium
thermophilum]
Length = 305
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 83 FEIASTEVTVGR-------LPE-RADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTF 134
F + TE +GR P+ D P A VS HARI + L+ DL STNGTF
Sbjct: 212 FLLTETESNIGRWDADGGIFPDIDLDQDDPEAKVSRRHARIVYQDGHYLLEDLGSTNGTF 271
Query: 135 IDE-KRLRSGVVAVASPGSRITFGDTHL 161
++ +RL G + + G I G T L
Sbjct: 272 VNRGRRLLPGNRYLLNDGDEIIVGKTFL 299
>gi|124491161|gb|ABN12915.1| EmbR [Mycobacterium tuberculosis]
Length = 167
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 97 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 155
Query: 143 GVVAVASPGSRI 154
V +RI
Sbjct: 156 AVTLNDGDHTRI 167
>gi|346724525|ref|YP_004851194.1| FHA-domain-containing protein [Xanthomonas axonopodis pv. citrumelo
F1]
gi|346649272|gb|AEO41896.1| FHA-domain-containing protein [Xanthomonas axonopodis pv. citrumelo
F1]
Length = 269
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 99 ADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGD 158
AD+VI + HAR+++ GD +L+ DL S G++I+ ++R G + G ++ F
Sbjct: 146 ADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGSWINGVQVRDGWL---QAGDQVVFDA 202
Query: 159 THLAMFRVSK 168
H + V +
Sbjct: 203 RHRFVVEVPR 212
>gi|320102726|ref|YP_004178317.1| FHA domain-containing protein [Isosphaera pallida ATCC 43644]
gi|319750008|gb|ADV61768.1| FHA domain containing protein [Isosphaera pallida ATCC 43644]
Length = 223
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 20/102 (19%)
Query: 62 LQPVGDGDTSHIGFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDS 121
L+P+G GD P+P + E+ VGR P D+ + VSG H ++
Sbjct: 10 LKPIGGGD--------PVP----LVRGELKVGRRPTN-DIRLDFENVSGKHCVLRFHNGL 56
Query: 122 LLVTDLDSTNGTFIDEKR-------LRSGVVAVASPGSRITF 156
V DL STNGT I+ +R L ++A A+ RI +
Sbjct: 57 WYVRDLGSTNGTLINGQRITTEHSVLPDDILAFATHLYRIEY 98
>gi|307353470|ref|YP_003894521.1| ArsR family transcriptional regulator [Methanoplanus petrolearius
DSM 11571]
gi|307156703|gb|ADN36083.1| transcriptional regulator, ArsR family [Methanoplanus petrolearius
DSM 11571]
Length = 264
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 103 IPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
+ V +SG+HA IQ+ G + +D STNG++I+ K + G + S G I G
Sbjct: 197 LSVTRISGVHAEIQRHGTQYIFSDPGSTNGSYINYKPVIKGESIILSDGDIIDLG 251
>gi|219848536|ref|YP_002462969.1| FHA domain-containing protein [Chloroflexus aggregans DSM 9485]
gi|219542795|gb|ACL24533.1| FHA domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 149
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID 136
+GR P D+V+ +S HAR+ ++GD ++ DL+STNGTF++
Sbjct: 80 IGRSPH-CDIVLNDNFLSSEHARLARQGDVWILEDLNSTNGTFLN 123
>gi|400976394|ref|ZP_10803625.1| hypothetical protein SPAM21_10846 [Salinibacterium sp. PAMC 21357]
Length = 219
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-----EKRLRSGVVAVASPGSRITFGD 158
P VS H +++ G S++VTDL STNG+ + ++LR G V S G+ + GD
Sbjct: 147 PTREVSETHVEVRQLGSSVIVTDLRSTNGSIVQVPGNAAQKLRQGESVVVSAGTLVDIGD 206
Query: 159 THL 161
++
Sbjct: 207 GNI 209
>gi|374310885|ref|YP_005057315.1| forkhead-associated protein [Granulicella mallensis MP5ACTX8]
gi|358752895|gb|AEU36285.1| Forkhead-associated protein [Granulicella mallensis MP5ACTX8]
Length = 701
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 104 PVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAM 163
P VS H + K+ + V DLDS+NGT+++ +RL +G G R+ +
Sbjct: 636 PDRLVSRFHLEVHKRKNLYYVIDLDSSNGTYLNGRRLPAGAATRLRSGDRLALANAVSFT 695
Query: 164 FRVSK 168
++SK
Sbjct: 696 LQLSK 700
>gi|159028924|emb|CAO87385.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 344
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + T+GR + D+VI +S HA +Q + GD L+ DL S NGTF++ +R+
Sbjct: 25 VGRSYWTIGRGKDN-DIVIKDHCISRNHAILQSTETGDFYLI-DLGSLNGTFVNGRRV-- 80
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
+ +ITFG T + +R + + + P E
Sbjct: 81 SIPVTIHNTDQITFGKTEVQFYRATPTNVGKQPRNLE 117
>gi|296269667|ref|YP_003652299.1| FHA domain-containing protein [Thermobispora bispora DSM 43833]
gi|296092454|gb|ADG88406.1| FHA domain containing protein [Thermobispora bispora DSM 43833]
Length = 167
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
F + S T GR PE +D+ + TVS HA ++G V D+ S NGT+++ +R+
Sbjct: 83 FLLDSDLTTAGRHPE-SDIFLDDVTVSRRHAEFYRRGGRFTVRDVGSLNGTYVNRERIEE 141
Query: 143 GVVA 146
+A
Sbjct: 142 APLA 145
>gi|170696867|ref|ZP_02887963.1| FHA domain containing protein [Burkholderia ambifaria IOP40-10]
gi|170138041|gb|EDT06273.1| FHA domain containing protein [Burkholderia ambifaria IOP40-10]
Length = 338
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR R D VI +VS +HA I+ G + D S+NGT + LR G AV G
Sbjct: 22 GRDDVRCDTVIRDGSVSRVHAHIRWVGGLWELHD-HSSNGTSVSGVVLRDGEHAVLQRGD 80
Query: 153 RITFGDTHLAMFRVSKIDTVEAPSKT 178
I FG +A +RV DT++ P+ T
Sbjct: 81 VIRFGRAGIAPWRV---DTLDDPADT 103
>gi|153006242|ref|YP_001380567.1| sigma-54 dependent trancsriptional regulator [Anaeromyxobacter sp.
Fw109-5]
gi|152029815|gb|ABS27583.1| sigma54 specific transcriptional regulator, Fis family
[Anaeromyxobacter sp. Fw109-5]
Length = 557
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
+ + V VG+ P D I VS H RI+ +G V DL STNGTFI R+
Sbjct: 141 VTAAGVVVGKDPT-CDAPIDDPYVSARHLRIEPRGGLWHVVDLGSTNGTFISGARVSQAQ 199
Query: 145 VAVASPGSRITFGDTHLAMFR 165
+ + P ++ GD + + R
Sbjct: 200 LPLGVP---VSLGDAEIVLER 217
>gi|68535980|ref|YP_250685.1| hypothetical protein jk0903 [Corynebacterium jeikeium K411]
gi|260578680|ref|ZP_05846588.1| FHA-domain-containing protein [Corynebacterium jeikeium ATCC 43734]
gi|123651122|sp|Q4JVU0.1|ODHI_CORJK RecName: Full=Oxoglutarate dehydrogenase inhibitor
gi|68263579|emb|CAI37067.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
gi|258603177|gb|EEW16446.1| FHA-domain-containing protein [Corynebacterium jeikeium ATCC 43734]
Length = 144
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 93 GRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGS 152
GR P+ +D+ + TVS HA ++ GD V D+ S NGT+++ + S V+ S G
Sbjct: 71 GRHPD-SDIFLDDVTVSRRHAEFRRNGDQYEVVDVGSLNGTYVNREPKNSSVL---SNGD 126
Query: 153 RITFGDTHLAMFRVSK 168
I G L SK
Sbjct: 127 EIQIGKFRLVFLNGSK 142
>gi|149925146|ref|ZP_01913450.1| sigma-54 dependent transcriptional regulator, Fis family protein
[Plesiocystis pacifica SIR-1]
gi|149813978|gb|EDM73619.1| sigma-54 dependent transcriptional regulator, Fis family protein
[Plesiocystis pacifica SIR-1]
Length = 441
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+I S V +G+ + ++ +P +VS HA ++++GDS + D STNGTF+ R+
Sbjct: 38 IDITSEVVRIGK-SRQCEVTLPDESVSRTHAELRREGDSYRLLDRASTNGTFVSGSRIAD 96
Query: 143 GVVAVASPGSRITFGDTHL 161
A PG I G L
Sbjct: 97 ---AWLRPGDVIGLGKIEL 112
>gi|425743207|ref|ZP_18861298.1| FHA domain protein [Acinetobacter baumannii WC-487]
gi|425484359|gb|EKU50764.1| FHA domain protein [Acinetobacter baumannii WC-487]
Length = 209
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID------EKRLRS 142
++ VGR + AD+++ A +S HA + K L V DL+S+NGTFI+ EK+L
Sbjct: 22 DMLVGRH-QDADLLLQAAEISRRHAALLLKDQLLWVQDLNSSNGTFINDIRIEQEKQLHD 80
Query: 143 G-VVAVAS 149
G +V AS
Sbjct: 81 GDIVQFAS 88
>gi|425437111|ref|ZP_18817538.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9432]
gi|389677992|emb|CCH93123.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9432]
Length = 358
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 85 IASTEVTVGRLPERADMVIPVATVSGLHARIQ--KKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + T+GR + D+VI +S HA +Q + GD L+ DL S NGTF++ +R+
Sbjct: 39 VGRSYWTIGRGKDN-DIVIKDHCISRNHAILQSTETGDFYLI-DLGSLNGTFVNGRRV-- 94
Query: 143 GVVAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTE 179
+ +ITFG T + +R + + + P E
Sbjct: 95 SIPVTIHNTDQITFGKTEVQFYRATPTNVGKQPRNLE 131
>gi|346311266|ref|ZP_08853274.1| hypothetical protein HMPREF9452_01143 [Collinsella tanakaei YIT
12063]
gi|345901211|gb|EGX71016.1| hypothetical protein HMPREF9452_01143 [Collinsella tanakaei YIT
12063]
Length = 85
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 81 DAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRL 140
+A I VGR AD+V+ VS HA++ G + DL+STNGT ++ +R+
Sbjct: 4 EALGINGARCIVGRERAAADVVLRDPNVSRRHAQLTYTGSDWSIEDLNSTNGTLVNNRRI 63
>gi|434397282|ref|YP_007131286.1| FHA domain containing protein [Stanieria cyanosphaera PCC 7437]
gi|428268379|gb|AFZ34320.1| FHA domain containing protein [Stanieria cyanosphaera PCC 7437]
Length = 329
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 108 VSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFGDTHLAMF 164
VS +HA I+ +GD+ + D+ S+NGT+++ L G G RI+ G L F
Sbjct: 268 VSRIHADIRVEGDTYFLEDVGSSNGTYVNHSPLPPGNRHRLRTGDRISLGKGDLVTF 324
>gi|403526413|ref|YP_006661300.1| transmembrane protein, RDD family domain protein [Arthrobacter sp.
Rue61a]
gi|403228840|gb|AFR28262.1| putative transmembrane protein, RDD family domain protein
[Arthrobacter sp. Rue61a]
Length = 539
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 90 VTVGRLP-----ERADMVIPVA----TVSGLHARIQKKGDSLLVTDLDSTNGTFID---- 136
V +GR P E + ++PV+ ++S H ++ GD + VTD +STNG+ +
Sbjct: 449 VLLGRNPAPQPRESVEQLLPVSDPGRSISKTHLHLRVDGDGVWVTDRNSTNGSAVTTPDG 508
Query: 137 -EKRLRSGVVAVASPGSRITFGD 158
+ RL G + PGS + FGD
Sbjct: 509 IQTRLHPGEASFVRPGSTVHFGD 531
>gi|296268047|ref|YP_003650679.1| FHA domain-containing protein [Thermobispora bispora DSM 43833]
gi|296090834|gb|ADG86786.1| FHA domain containing protein [Thermobispora bispora DSM 43833]
Length = 245
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+FE+ + +GR + D+ + VS HA ++ +GD +++ DL STNGTF++ + +R
Sbjct: 165 SFELTTPVTLLGRGTD-CDLRLVDPGVSRHHAELRIEGDKVVLVDLGSTNGTFVNGQPVR 223
Query: 142 SGVVAVASPGSRITFGDTHLAMFR 165
G+R+T G T L R
Sbjct: 224 R---IEMQDGTRVTLGRTTLVFRR 244
>gi|124491167|gb|ABN12918.1| EmbR [Mycobacterium tuberculosis]
Length = 185
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 FEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRS 142
+ + + +GRL + D+V+ A VS HA I G + ++ DL S+NG + +R+RS
Sbjct: 115 YPLQAAATRIGRLHDN-DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRS 173
Query: 143 GV 144
V
Sbjct: 174 AV 175
>gi|119964181|ref|YP_947202.1| transRDD family protein [Arthrobacter aurescens TC1]
gi|119951040|gb|ABM09951.1| putative transmembrane protein, RDD family domain [Arthrobacter
aurescens TC1]
Length = 534
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 90 VTVGRLP-----ERADMVIPVA----TVSGLHARIQKKGDSLLVTDLDSTNGTFID---- 136
V +GR P E + ++PV+ ++S H ++ GD + VTD +STNG+ +
Sbjct: 444 VLLGRNPAPQPGESVEQLLPVSDPGRSISKTHLHLRVDGDGVWVTDRNSTNGSAVTTPDG 503
Query: 137 -EKRLRSGVVAVASPGSRITFGD 158
+ RL G + PGS + FGD
Sbjct: 504 IQTRLHPGEASFVRPGSTVHFGD 526
>gi|445437208|ref|ZP_21440938.1| FHA domain protein [Acinetobacter baumannii OIFC021]
gi|444754118|gb|ELW78750.1| FHA domain protein [Acinetobacter baumannii OIFC021]
Length = 209
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 89 EVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID------EKRLRS 142
++ VGR + AD+++ A +S HA + K L V DL+S+NGTFI+ EK+L
Sbjct: 22 DMLVGRH-QDADLLLQAAEISRRHAALLLKDQLLWVQDLNSSNGTFINDIRIEQEKQLHD 80
Query: 143 G-VVAVAS 149
G +V AS
Sbjct: 81 GDIVQFAS 88
>gi|424744774|ref|ZP_18173057.1| FHA domain protein [Acinetobacter baumannii WC-141]
gi|422942554|gb|EKU37601.1| FHA domain protein [Acinetobacter baumannii WC-141]
Length = 208
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 19/91 (20%)
Query: 84 EIASTEVTVGR-----LPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFID-- 136
EI E++V R + AD+++ A +S HA + K +L V DL+S+NGTF++
Sbjct: 11 EITGQEISVDRDMLVGRHQDADVLLQAAEISRRHAALLLKDQALWVQDLNSSNGTFVNDI 70
Query: 137 ----EKRLRSGVV--------AVASPGSRIT 155
EK+L G + +V +P ++T
Sbjct: 71 RIEQEKQLHDGDIVQFASFKFSVLAPAQKVT 101
>gi|392409763|ref|YP_006446370.1| family 3 adenylate cyclase [Desulfomonile tiedjei DSM 6799]
gi|390622899|gb|AFM24106.1| family 3 adenylate cyclase [Desulfomonile tiedjei DSM 6799]
Length = 542
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 80 PDAFEIASTEV----TVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFI 135
PD EIA V VGR E+ D+ + VS H I ++G +V DL+S NGT+I
Sbjct: 9 PDGQEIAQEFVGDQTIVGR-HEKCDLRLVDGMVSRNHCLILQEGKRFVVKDLESRNGTWI 67
Query: 136 DEKRLRS 142
+ +R+++
Sbjct: 68 NGRRIKN 74
>gi|345496941|ref|XP_001601225.2| PREDICTED: kanadaptin-like [Nasonia vitripennis]
Length = 700
Score = 40.0 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 92 VGRLPERADMVIPVATVSGLHARIQ-------KKGDSLLVTDLDSTNGTFIDEKRLRSGV 144
VGRLP DM + T+S HA Q K G + V DL ST+GTF + R+R V
Sbjct: 150 VGRLPN-CDMSMAHPTISRYHAVFQYRANGDEKNGKGMYVYDLGSTHGTFWNGNRIRPKV 208
Query: 145 VAVASPGSRITFGDTHLAMFRVSKIDTVEAPSKTEESE 182
G I FG + V+AP +E E
Sbjct: 209 YVRVQGGHMIRFGCSQRKFI-------VKAPPCDQEEE 239
>gi|320583563|gb|EFW97776.1| hypothetical protein HPODL_0406 [Ogataea parapolymorpha DL-1]
Length = 156
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 74 GFKVPMPDAFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVT----DLDS 129
G K+P+ ++ + T+G+ P+ D+V+ VS HA +Q + + +T DLDS
Sbjct: 60 GQKIPLINS----KSYYTIGKDPQTNDIVVADELVSANHAVLQFRSKNSEITAYIIDLDS 115
Query: 130 TNGTFIDEKRLRSGVVAVASPGSRITFGD 158
TNGTFI + L + FGD
Sbjct: 116 TNGTFIKDHELPPNRYVEVLHKDVLRFGD 144
>gi|182439483|ref|YP_001827202.1| ABC transporter ATP-binding protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178467999|dbj|BAG22519.1| putative ABC transporter ATP-binding protein [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 864
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 87 STEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLRSGVVA 146
S T+GR P+ D+ I A VS HA I G S + D STNGT++ +R++ +
Sbjct: 22 SRSYTLGRDPQ-GDLAIDDARVSWRHATISWSGRSWFIEDHGSTNGTYVRGQRIQQVEIG 80
Query: 147 VASPGSRITFGD 158
PGS + G+
Sbjct: 81 ---PGSVLHLGN 89
>gi|170092243|ref|XP_001877343.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647202|gb|EDR11446.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 576
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 64 PVGDGDTSHI-GFKVPMPDA-----FEIASTEVTVGRLPERADMVIPVATVSGLHARIQK 117
P+ SH+ G+ P + F ++GR E +V+P VS H I+
Sbjct: 43 PIATAADSHLWGYLQPCSSSLTRIDFWKIHPRYSIGRNTEVNQVVLPGFKVSNQHCVIKW 102
Query: 118 KGD---SLLVTDLDSTNGTFIDEKRLRSGVVAVASPGSRITFG 157
G+ +++V DL S+NGTFI+ ++ G + G+ I FG
Sbjct: 103 DGEGNSNVVVHDL-SSNGTFINNTKIGKGQSRILREGNEIAFG 144
>gi|400293092|ref|ZP_10794977.1| FHA domain protein [Actinomyces naeslundii str. Howell 279]
gi|399901798|gb|EJN84668.1| FHA domain protein [Actinomyces naeslundii str. Howell 279]
Length = 896
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 82 AFEIASTEVTVGRLPERADMVIPVATVSGLHARIQKKGDSLLVTDLDSTNGTFIDEKRLR 141
+F I S+ T+GR P+ +V+ +S HARI + L+VTDL STNG +++ +R+
Sbjct: 207 SFRITSSG-TIGRAPDNT-LVLDDPLISKHHARIDVSPNGLVVTDLGSTNGIYVEGQRVS 264
Query: 142 SGVVAVASPGSRITFGDTHLAM 163
V V P + G T +A+
Sbjct: 265 Q--VQVTRP-VLLGLGSTFIAL 283
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.127 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,859,191,020
Number of Sequences: 23463169
Number of extensions: 111550557
Number of successful extensions: 288388
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 1575
Number of HSP's that attempted gapping in prelim test: 287120
Number of HSP's gapped (non-prelim): 2646
length of query: 195
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 60
effective length of database: 9,191,667,552
effective search space: 551500053120
effective search space used: 551500053120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 73 (32.7 bits)