AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>040068
MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE
LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI
SCS
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT4G32105 AT4G32105 AT4G32105	protein from Arabidopsis thaliana	1.5e-19
BLAST match view associations BLAST with AT4G32100 AT4G32100 AT4G32100	protein from Arabidopsis thaliana	1.4e-18
BLAST match view associations BLAST with AT4G32110 AT4G32110 AT4G32110	protein from Arabidopsis thaliana	2.2e-18
BLAST match view associations BLAST with AT4G32090 AT4G32090 AT4G32090	protein from Arabidopsis thaliana	3.7e-16
BLAST match view associations BLAST with AT1G32583 AT1G32583 AT1G32583	protein from Arabidopsis thaliana	3.3e-08
BLAST match view associations BLAST with TPD1 TPD1 TPD1 AT4G24972	protein from Arabidopsis thaliana	2.3e-07
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040068
        (123 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006542 - symbol:AT4G32105 species:3702 "Ara...   233  1.5e-19   1
TAIR|locus:2116707 - symbol:AT4G32100 species:3702 "Arabi...   224  1.4e-18   1
TAIR|locus:2116612 - symbol:AT4G32110 species:3702 "Arabi...   222  2.2e-18   1
TAIR|locus:2116702 - symbol:AT4G32090 species:3702 "Arabi...   201  3.7e-16   1
TAIR|locus:1009023131 - symbol:AT1G32583 "AT1G32583" spec...   126  3.3e-08   1
TAIR|locus:1006230300 - symbol:TPD1 "AT4G24972" species:3...   118  2.3e-07   1


>TAIR|locus:505006542 [details] [associations]
            symbol:AT4G32105 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] InterPro:IPR002659 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006486 GO:GO:0008378
            PANTHER:PTHR11214 HOGENOM:HOG000243728 ProtClustDB:CLSN2689712
            EMBL:AY086382 IPI:IPI00527985 RefSeq:NP_567887.1 UniGene:At.31686
            PaxDb:Q8LCV8 EnsemblPlants:AT4G32105.1 GeneID:829342
            KEGG:ath:AT4G32105 TAIR:At4g32105 eggNOG:NOG313586
            InParanoid:Q8LCV8 OMA:VCHINHE PhylomeDB:Q8LCV8
            Genevestigator:Q8LCV8 Uniprot:Q8LCV8
        Length = 124

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 48/118 (40%), Positives = 65/118 (55%)

Query:     6 KFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCI-CTQLELKLS 64
             K L  ++    + +G   C L+ + V QS+TGK V NK EW + + N C  C     KLS
Sbjct:     7 KVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLS 66

Query:    65 CKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISC 122
             C GFQ+V P+  S+++ SGD C ++N GN  +      FNY WDTSF  K I   I C
Sbjct:    67 CVGFQSVTPVATSLLSKSGDIC-LLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123


>TAIR|locus:2116707 [details] [associations]
            symbol:AT4G32100 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] InterPro:IPR002659 EMBL:CP002687
            GO:GO:0016020 GO:GO:0006486 GO:GO:0008378 PANTHER:PTHR11214
            IPI:IPI00542263 RefSeq:NP_194938.4 UniGene:At.54573 PRIDE:F4JTI5
            EnsemblPlants:AT4G32100.1 GeneID:829341 KEGG:ath:AT4G32100
            OMA:KPEWEVK Uniprot:F4JTI5
        Length = 122

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 46/120 (38%), Positives = 70/120 (58%)

Query:     6 KFLAAIMLFTIITKG--NCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKL 63
             KFL  ++LF  +T+G  +   +L+ + V QS+TG  V NK EW + + N+  C      L
Sbjct:     7 KFLCLVLLFAFVTQGYGDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNSSPCYFTHTTL 66

Query:    64 SCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS 123
             SC  F++V PID  +++ SGD C ++ NG+  +    +SF Y WDTSF  K +   I+CS
Sbjct:    67 SCVRFKSVTPIDSKVLSKSGDTC-LLGNGDSIHD---ISFKYVWDTSFDLKVVDGYIACS 122


>TAIR|locus:2116612 [details] [associations]
            symbol:AT4G32110 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISS] InterPro:IPR002659
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006486
            GO:GO:0008378 PANTHER:PTHR11214 HOGENOM:HOG000243728 EMBL:BT014801
            EMBL:BT015698 IPI:IPI00518123 RefSeq:NP_680754.1 UniGene:At.49722
            EnsemblPlants:AT4G32110.1 GeneID:829343 KEGG:ath:AT4G32110
            TAIR:At4g32110 eggNOG:NOG324125 InParanoid:Q6ID72 PhylomeDB:Q6ID72
            ProtClustDB:CLSN2689712 Genevestigator:Q6ID72 Uniprot:Q6ID72
        Length = 124

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 45/118 (38%), Positives = 62/118 (52%)

Query:     6 KFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCI-CTQLELKLS 64
             K L  ++    + +G   C+L+ + V QS+TGK V NK EW + + N C  C     +L 
Sbjct:     7 KLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELL 66

Query:    65 CKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISC 122
             C GF +V PID S++  SGD C +VN G        + F Y WDTSF  K I   + C
Sbjct:    67 CVGFNSVTPIDTSLLLKSGDAC-LVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123


>TAIR|locus:2116702 [details] [associations]
            symbol:AT4G32090 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] InterPro:IPR002659 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006486 GO:GO:0008378
            EMBL:AL021636 EMBL:AL161580 PANTHER:PTHR11214 IPI:IPI00538727
            PIR:T04636 RefSeq:NP_194937.1 UniGene:At.63745
            EnsemblPlants:AT4G32090.1 GeneID:829340 KEGG:ath:AT4G32090
            TAIR:At4g32090 eggNOG:NOG262319 HOGENOM:HOG000243728
            InParanoid:O49383 OMA:ATAQFTY PhylomeDB:O49383
            ProtClustDB:CLSN2686018 Genevestigator:O49383 Uniprot:O49383
        Length = 124

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 39/125 (31%), Positives = 68/125 (54%)

Query:     1 MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60
             MA  LK    ++L ++++ G C CT   I++   +TG+ +  + EW++T+ NTC C Q  
Sbjct:     1 MAFALKCFVVVLLLSMVSHGLCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKH 60

Query:    61 LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120
             + LSC GF   +P+ P ++   G+ C ++  G       T  F YA    + F+P+ S++
Sbjct:    61 VTLSCGGFAPAKPVKPLLLQPQGNTCLMIK-GAALPAGATAQFTYAGQP-YIFRPVGSKV 118

Query:   121 --SCS 123
               SC+
Sbjct:   119 DPSCT 123


>TAIR|locus:1009023131 [details] [associations]
            symbol:AT1G32583 "AT1G32583" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009408 "response to heat"
            evidence=IEP] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009408
            EMBL:DQ487503 IPI:IPI00656613 RefSeq:NP_001031128.1
            UniGene:At.49435 EnsemblPlants:AT1G32583.1 GeneID:3766880
            KEGG:ath:AT1G32583 TAIR:At1g32583 OMA:VEIFNSC PhylomeDB:Q1G3T1
            Genevestigator:Q2V4J6 Uniprot:Q1G3T1
        Length = 179

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 31/102 (30%), Positives = 51/102 (50%)

Query:    24 CTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCI--CTQLELKLSCKGFQTVEPIDPSIIA- 80
             C+ DDI + Q  T         + + + N+C+  C   E+ +SC  F +V  ++P +   
Sbjct:    80 CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query:    81 ISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISC 122
             +  D+C +VN+G P     +LSF YA   S+P    S  +SC
Sbjct:   140 LDYDDC-LVNDGQPLGPGQSLSFQYANSFSYPLSVAS--VSC 178


>TAIR|locus:1006230300 [details] [associations]
            symbol:TPD1 "AT4G24972" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0001709 "cell fate determination"
            evidence=IMP] [GO:0048653 "anther development" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0048653 GO:GO:0001709 EMBL:AY394846
            IPI:IPI00526307 RefSeq:NP_974612.1 UniGene:At.47965 DIP:DIP-29700N
            IntAct:Q6TLJ2 EnsemblPlants:AT4G24972.1 GeneID:2745725
            KEGG:ath:AT4G24972 TAIR:At4g24972 eggNOG:NOG325440
            HOGENOM:HOG000077765 InParanoid:Q6TLJ2 OMA:RIHINCG
            ProtClustDB:CLSN2915210 Genevestigator:Q6TLJ2 Uniprot:Q6TLJ2
        Length = 176

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 32/105 (30%), Positives = 58/105 (55%)

Query:    23 QCTLDDIKVSQSQTGKTVPNK-QEWRLTLNNTCI--CTQLELKLSCKGFQTVEPIDPSII 79
             +C   DI V+Q+ T + +PN    + + + N C+  C    + ++C  F + + I+P + 
Sbjct:    76 KCKSTDIVVNQAVT-EPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVF 134

Query:    80 A-ISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS 123
               I  D+C +VNNG P    +TLSF+YA   +FP+    + ++C+
Sbjct:   135 KRIHYDDC-LVNNGKPLPFGSTLSFHYA--NTFPYHLSVAFVTCA 176


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      123       123   0.00091  102 3  11 22  0.48    30
                                                     29  0.50    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.69u 0.15s 12.84t   Elapsed:  00:00:01
  Total cpu time:  12.69u 0.15s 12.84t   Elapsed:  00:00:01
  Start:  Fri May 10 01:30:58 2013   End:  Fri May 10 01:30:59 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
