Your job contains 1 sequence.
>040073
MEEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDL
TSTTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRR
LRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVI
NNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHH
QFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNVLDLLC
RCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQVGVV
SKLCLVLQVDASVKTKERAREILKLNARAWRDSPCVPAHLLSSYPSS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040073
(407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 684 1.6e-117 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 1157 1.8e-117 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 540 4.4e-52 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 507 1.4e-48 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 428 3.3e-40 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 418 3.7e-39 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 383 1.9e-35 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 364 2.0e-33 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 366 4.2e-33 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 360 5.2e-33 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 335 1.7e-29 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 318 8.7e-28 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 316 1.3e-27 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 305 3.6e-27 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 289 1.4e-24 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 281 2.8e-23 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 280 1.5e-22 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 275 9.2e-22 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 254 3.7e-20 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 263 4.0e-20 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 185 4.3e-18 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 240 1.9e-17 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 224 5.6e-16 1
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 216 2.5e-15 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 216 1.2e-14 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 208 3.6e-14 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 188 1.0e-13 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 207 1.4e-13 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 205 2.0e-13 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 204 2.8e-13 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 179 1.9e-12 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 131 2.2e-12 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 137 1.0e-11 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 190 1.1e-11 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 186 3.1e-11 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 179 1.8e-10 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 145 2.9e-09 3
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 166 4.6e-09 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 140 7.6e-09 2
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 158 1.9e-08 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 141 2.4e-08 2
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 141 5.2e-08 2
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 149 1.9e-07 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 149 1.9e-07 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 151 2.4e-07 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 149 4.1e-07 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 144 6.7e-07 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 144 6.7e-07 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 142 1.1e-06 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 141 1.4e-06 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 139 1.8e-06 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 138 4.1e-06 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 133 4.8e-06 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 136 5.1e-06 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 139 5.3e-06 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 133 6.6e-06 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 132 8.7e-06 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 134 1.8e-05 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 131 1.9e-05 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 134 1.9e-05 1
UNIPROTKB|Q6K762 - symbol:PUB73 "U-box domain-containing ... 132 2.0e-05 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 129 6.8e-05 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 125 7.7e-05 2
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 124 9.5e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 118 0.00058 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 120 0.00062 1
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 684 (245.8 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 138/259 (53%), Positives = 187/259 (72%)
Query: 152 DAGSDECDEALSILYHLNVSESYLKSIVINN-GEEFLESLMRVLKCGNYQSRSYAIMLLK 210
D+ DEALS+LYHL+ SE+ LKS++ N G +++L ++++ G Y+SR+YA +LLK
Sbjct: 179 DSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLK 238
Query: 211 SIFEVADPFQLISVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEX 270
+ EVADP Q+I +++E F E++ +L H Q S +A+++A+++LV CPWGRNR KAVE
Sbjct: 239 KLLEVADPMQIILLERELFGEVIQIL--HDQISHKATRSAMQILVITCPWGRNRHKAVEG 296
Query: 271 XXXXXXXXXXXXXT---ERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVS 327
T ERR E+ + VLD+LC+CAEGRAE L HGA +AVVSKKILRVS
Sbjct: 297 GTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVS 356
Query: 328 HAASDRAVRILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNA 387
S+RAVR+L SV +F AT +LQEMLQ+GVV+KLCLVLQV KTKE+A+E+LKL+A
Sbjct: 357 QITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHA 416
Query: 388 RAWRDSPCVPAHLLSSYPS 406
R WR+SPCVP +L SYP+
Sbjct: 417 RVWRESPCVPRNLYDSYPA 435
Score = 494 (179.0 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 100/190 (52%), Positives = 135/190 (71%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
+EIE+P+ FLCPISL +M+DPV VSTGITYDR +IE+WLF+ K N+CPVTKQV+ ETDLT
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 62 STTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRL 121
PNHTLRRLIQ+WCT+NA +GIERIPTP+PP+ K++I K++ ++ S KCL+RL
Sbjct: 63 ---PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRL 119
Query: 122 RSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVIN 181
R I ++ N+ CLEAA EFLA I++ S D + S L N+++ +S ++
Sbjct: 120 RQIVSENTTNKRCLEAAEVPEFLANIVSNS---VDTYNSPSSSLSSSNLNDM-CQSNMLE 175
Query: 182 NGEEFLESLM 191
N + SLM
Sbjct: 176 NRFDSSRSLM 185
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 226/408 (55%), Positives = 299/408 (73%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
EEIE+P FLCPISL++M+DPV VSTGITYDR +IE+WLF K N+CPVTKQ + + DLT
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 62 STTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRL 121
PNHTLRRLIQ+WCT+NA +G+ERIPTP+PP+ K++I K++ D+ S KCL+RL
Sbjct: 68 ---PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRL 124
Query: 122 RSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVIN 181
R I ++ N+ CLEAAG EFLA I++ DEAL++LYHL SE+ LK+++ N
Sbjct: 125 RQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNN 184
Query: 182 NGEE-FLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHH 240
+ ++SL ++++ G Y+SR YA +LLK+I EVADP Q +++K E FTE+V +L D
Sbjct: 185 KKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDD-- 242
Query: 241 QFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXX---XXXTERRVCELMLNVLD 297
+ SQ+A+KAA+ +LV +CPWGRNR KAVE +ERR E+ + VLD
Sbjct: 243 RISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLD 302
Query: 298 LLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQV 357
LLC+CAEGRAE L HGA +AVV KKILRVS ASDRAVR+L SV +F AT +L EMLQ+
Sbjct: 303 LLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQL 362
Query: 358 GVVSKLCLVLQVDASVKTKERAREILKLNARAWRDSPCVPAHLLSSYP 405
GVV+KLCLVLQV KTKE+A+E+LKL+AR W+DSPC+P +++ +YP
Sbjct: 363 GVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAYP 410
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 141/398 (35%), Positives = 213/398 (53%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I++P HF CPISL+LM+DPVTV TG TYDR +IE W+ N TCPVT+ L +D T
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPL--SDFT-L 68
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPST-----GRKC- 117
PNHTLRRLIQ WC N +G+ERIPTP+ P D T + +L+ A T R
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128
Query: 118 LRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
LRRLR S++NR + A A E L I+ S+ E+L++L L ++E +
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPN-QF 187
Query: 178 IVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIF---EVADPFQLISVKQEFFTEIVN 234
+ I++ +E L R+L + ++R A L++ + + AD IS + F +++
Sbjct: 188 VSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLD 247
Query: 235 VLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLN 294
+LR+ S++A K +K L LC R A+ +R E L
Sbjct: 248 LLRNPIS-SRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALA 306
Query: 295 VLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEM 354
++LLCR EG A +H + ++ K ILRVS A++ A L ++C +A R +E
Sbjct: 307 TVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC--TAEERWREEA 364
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRD 392
GVV +L L++Q + + + K++A+++LKL +W D
Sbjct: 365 AGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPD 402
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 135/406 (33%), Positives = 209/406 (51%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I++P HF CPISL LM DPVT+STG TYDR +I+ W+ N TCPVT+ L +D T
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWI-AMGNTTCPVTRVAL--SDFT-L 67
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPST-----GRKC- 117
PNHTLRRLIQ WC N +G+ERIPTP+ P D + +L+ A T R
Sbjct: 68 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAA 127
Query: 118 LRRLRSITLQSERNRSCLEAAGAIEFLATI----ITKSDAGSDECDEALSILYHLNVSES 173
+RRLR + SE+NR + A E L I I + S+ E+L++L L+++E+
Sbjct: 128 IRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTET 187
Query: 174 YLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQL---ISVKQEFFT 230
+++ + + + R+L + + R A L++ + A L IS F
Sbjct: 188 ECEAVASDPSR--VGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFE 245
Query: 231 EIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCE 290
++++L++ S++A K +K + LC + R A+ +R E
Sbjct: 246 GVLDLLKNPIS-SRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTE 304
Query: 291 LMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARV 350
L ++LLCR EG A +H + ++ K ILRVS A++ A L ++C +A R
Sbjct: 305 RGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC--TAEERC 362
Query: 351 LQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDSPCV 396
E G+V++L L++Q D + + K +A+ +LKL +W D V
Sbjct: 363 RDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 120/406 (29%), Positives = 197/406 (48%)
Query: 3 EIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTS 62
EI +P F CPIS+ LM+DPV +STGITYDRV+IE W+ N TCPVT VL D
Sbjct: 28 EITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWI-NSGNKTCPVTNTVLTTFD--- 83
Query: 63 TTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG--RKC--- 117
PNHT+R++IQ WC I+RIPTP+ P+ ++ +I + G KC
Sbjct: 84 QIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVI 143
Query: 118 LRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDEC----DEALSIL-YHLNVSE 172
+ +++ + +SE+NR C+ L K +G ++ +E LS+L + +
Sbjct: 144 IEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKF-SGDEKLTFMLNEILSLLTWMFPIGL 202
Query: 173 SYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADP-FQLISVKQEFFTE 231
+ + + F + +LK + R A ++K I + + +V+
Sbjct: 203 EGISKLA--SATSF-RCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEA 259
Query: 232 IVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCEL 291
+V ++RD S ++K++L + ++ E VCE
Sbjct: 260 LVKLIRD--SVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEK 317
Query: 292 MLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVL 351
L VLD +C GR E+ K+ + ++ KKI +VS A+ ++ ++ + K T V
Sbjct: 318 ALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAV- 376
Query: 352 QEMLQVGVVSKLCLVLQVDASVKTKERAREILKL-NARAWRDSPCV 396
++ +++G K+ LVLQV +TKE+A E+LK+ N + S CV
Sbjct: 377 EDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCV 422
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 125/397 (31%), Positives = 195/397 (49%)
Query: 3 EIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTS 62
EI +P+ F CPIS +LM+DPV +++GITYDR NIE+W F TCPVT VL T L
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKW-FESGYQTCPVTNTVL--TSLEQ 86
Query: 63 TTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG--RKCLRR 120
PNHT+RR+IQ WC + GIERIPTP+ PV Q+ +I + G C+
Sbjct: 87 I-PNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEM 145
Query: 121 LRSITL---QSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
+ +T +SERNR C++ GA L DA S+ + +L + ++V +++
Sbjct: 146 VTKMTRLGKESERNRKCVKENGAGLVLCVCF---DAFSENANASLLLEETVSVL-TWMLP 201
Query: 178 IVINNGEEFLES-----LMRVLKCGNYQSRSYAIMLLKSIFE--VADPFQLISVK--QEF 228
I + + + L+ +L+ G+ A L+K + E V L + QE
Sbjct: 202 IGLEGQSKLTTTSSFNRLVELLRNGDQN----AAFLIKELLELNVTHVHALTKINGVQEA 257
Query: 229 FTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRV 288
F + +N RD + S + L + + +E V
Sbjct: 258 FMKSIN--RDSTCVNSLISIHHMILT------NQETVSRFLELDLVNITVEMLVDSENSV 309
Query: 289 CELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATA 348
CE L VL+++C EGR ++ ++ + ++ KKIL++S V ++ VCK S
Sbjct: 310 CEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCK-SGDG 366
Query: 349 RVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKL 385
++E L++G KL ++LQV TKE+ E+LK+
Sbjct: 367 SEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKM 403
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 122/396 (30%), Positives = 195/396 (49%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
VP F CPISL +M+ PV++STG+TYDRV+I+RWL NNTCP T Q+LQ + P
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDD-GNNTCPATMQILQNKEFV---P 66
Query: 66 NHTLRRLIQAWC-TINACHGIERIPTPQPPVDKTQIV----KILNDAKKSPSTGRKCLRR 120
N TL RLI W +IN E + P D+ +I NDA+ K LR
Sbjct: 67 NLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARS------KILRF 120
Query: 121 LRSITLQSERNRSCLEAAGAIEFLATIITK-SDAG--SDE----CDEALSILYHLN---V 170
R +S+ NR L AG +F+A ++ SD+ SD EA+ IL +
Sbjct: 121 AR----ESDENREFL--AGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIF 174
Query: 171 SESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFT 230
L ++++ NG + L S ++K GN + + +L+ I A+ +I+ + T
Sbjct: 175 DRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVT 234
Query: 231 EIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAV-EXXXXXXXXXXXXXXTERRVC 289
EI+ ++ S +A L LL+ + R ++ + E T V
Sbjct: 235 EIIKLISSDSDSS--LIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVT 292
Query: 290 ELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATAR 349
E L +L+ + C EGR+E+ G + V K+++VS AA++ AV +L SVC +
Sbjct: 293 EKCLKLLEAISSCKEGRSEICD-GVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKK 351
Query: 350 VLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKL 385
++++ V+K+ L+LQ + S+ + ++LK+
Sbjct: 352 AQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKV 387
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 117/401 (29%), Positives = 192/401 (47%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I VP F CPISL +M+ PV++ TG+TYDR +I+RWL NNTCP T Q+LQ D
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQILQNKDFI-- 64
Query: 64 TPNHTLRRLIQAWC-TINACHGIERIPTPQPPVDKTQIVKILNDAK--KSPSTGRKCLRR 120
PN TL+RLI+ W ++ +E P D +I ++ K K R+ L +
Sbjct: 65 -PNRTLQRLIEIWSDSVRRRTCVESAELAAPTRD--EIADAIDRVKIEKEERDDREVLSK 121
Query: 121 LRSITLQSERNRSCLEAAGAIEFLATII---------TKSDAGSDECDEALSILYHLN-- 169
+ +S+ NR L AG +F+ ++ T S A S EA+ IL +
Sbjct: 122 IVRFGRESDDNRGFL--AGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSK 179
Query: 170 VSESY-LKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEF 228
VS+ ++++ NG + L ++ + K GN + + LL+ I A+ LI+ +
Sbjct: 180 VSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGL 239
Query: 229 FTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTER-- 286
TE++ + S +++L L+ + R ++ + T
Sbjct: 240 ITELMKSISKDSDLS--LIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLS 297
Query: 287 -RVCELMLNVLDLLCRCAEGRAELLK-HGAGLAVVSKKILRVSHAASDRAVRILCSVCKF 344
V E L +L++L EGR+E+ G L V KK+++VS AA++ AV +L SV
Sbjct: 298 VSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYL 357
Query: 345 SATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKL 385
+ L+ + V V+K+ L+LQ + S + ++LK+
Sbjct: 358 FKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKV 398
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 366 (133.9 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 113/395 (28%), Positives = 199/395 (50%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
+++ +P FLCP+SL+LM+DPV V+TG TY+R I+RW+ C N TCP T+Q L+ LT
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWI-DCGNLTCPKTQQKLENFTLT 295
Query: 62 STTPNHTLRRLIQAWCTINACHGIER----IPTPQPPVDKTQIVKILNDAKKSPSTG--R 115
PN+ LR LI WC A H IE+ I +++ L S ST R
Sbjct: 296 ---PNYVLRSLISRWC---AEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRR 349
Query: 116 KCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL 175
+ +RS++ +S NR + AGAI L ++T D + E A++ + +L++ E+
Sbjct: 350 NAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQE--NAITCVLNLSIYENN- 406
Query: 176 KSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
K +++ G + S+++VL+ G ++R A L S+ +AD ++I +V++
Sbjct: 407 KELIMFAGA--VTSIVQVLRAGTMEARENAAATLFSL-SLADENKIIIGGSGAIPALVDL 463
Query: 236 LRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNV 295
L + + + K A L LC + N+ +AV T R+ + L +
Sbjct: 464 LENG---TPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTI 520
Query: 296 LDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAAS-DRAVRILCSVCKFSATARVLQEM 354
L +L + ++ ++K A++ IL+ + + A IL S+CK T +++ +
Sbjct: 521 LSVLANNQDAKSAIVKANTLPALIG--ILQTDQTRNRENAAAILLSLCKRD-TEKLIT-I 576
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREILKLNARA 389
++G V L + L + + + K +A +L+L +A
Sbjct: 577 GRLGAVVPL-MDLSKNGTERGKRKAISLLELLRKA 610
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 115/394 (29%), Positives = 190/394 (48%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I VP+ F CPISL +MR PV++ TG+TYDR +I+RWL NNTCP T Q+L+ D
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQLLKTKDFV-- 66
Query: 64 TPNHTLRRLIQAWC-TINACHGIERIPTPQPP----VDKTQIVKILNDAKKSPSTGRKCL 118
PN TL+RLI W +I H + P PP V + V +L + S K +
Sbjct: 67 -PNLTLQRLINIWSDSIGRRHNGDS-PVLNPPSGREVPTKEEVNVLLERLMSLENLMKIV 124
Query: 119 RRLRSITLQSERNRSCL-EAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
R ++ S+ NR L + + L II + A+ IL + V L +
Sbjct: 125 RFVKD----SDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSN 180
Query: 178 IVI-NNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVL 236
+++ N+G + L +++ ++ GN +S+ ++ +L I A +I+ + TE++ +
Sbjct: 181 LMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSI 240
Query: 237 RDHHQFSQQASKAALKLLVELCPWGRNRIK--AVEXXXXXXXXXXXXXXTERRVCELMLN 294
+A+L L+ + R R K A + T V E L
Sbjct: 241 SITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKSLK 300
Query: 295 VLDLLCRCAEGRAELLKHGAGLAV--VSKKILRVSHAASDRAVRILCSVCKFSATARVLQ 352
+L+ L EGR E+ G V V KK+L+VS A++ AV IL +C + ++
Sbjct: 301 LLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVE 360
Query: 353 EMLQ-VGVVSKLCLVLQVDASVKTKERAREILKL 385
E ++ V+KL +V+Q + S ++ A++++K+
Sbjct: 361 ETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKV 394
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 114/394 (28%), Positives = 190/394 (48%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I +P F CPISL+LM+DPV VSTG TY+R IE+W+ + ++TCP T+Q + + LT
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIAS-GHHTCPTTQQKMSTSALT-- 327
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILN-DA--KK--SPSTG--RK 116
PN+ LR LI WC N +R P P + N DA K SP T R
Sbjct: 328 -PNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRS 386
Query: 117 CLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLK 176
LR + ++ NR C+ AGAI L ++++ SD + E A++ L +L++ E K
Sbjct: 387 AAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQE--HAVTALLNLSIHEDN-K 443
Query: 177 SIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVL 236
+ +I++G + S++ VLK G+ ++R A L S+ V D +++ +V +L
Sbjct: 444 ASIISSGA--VPSIVHVLKNGSMEARENAAATLFSL-SVIDEYKVTIGGMGAIPALVVLL 500
Query: 237 RDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVL 296
+ SQ+ K A L LC + N+ +A+ T + E M +L
Sbjct: 501 GEG---SQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMA-IL 556
Query: 297 DLLCRCAEGRAELLKHGAG--LAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEM 354
+L EG+A + GA + V+ + I + + A ++ +C L
Sbjct: 557 SILSSHPEGKAAI---GAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARA 613
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREILKLNAR 388
+ G++ L L ++ + + K +A ++L+ +R
Sbjct: 614 QECGIMVPL-RELALNGTDRGKRKAVQLLERMSR 646
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 318 (117.0 bits), Expect = 8.7e-28, P = 8.7e-28
Identities = 109/401 (27%), Positives = 193/401 (48%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
+ + +P FLCPISL+LM+DP VSTG TY+R I+RW+ C N +CP T+Q L+ LT
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DCGNLSCPKTQQKLENFTLT 297
Query: 62 STTPNHTLRRLIQAWCT---INACHGIERIPTPQPPV-------DKTQI-VKILNDAKKS 110
PN+ LR LI WCT I G T D + I + + +S
Sbjct: 298 ---PNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQS 354
Query: 111 PSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNV 170
R + +RS++ +S NR + AGAI L ++T SD ++ + A++ + +L++
Sbjct: 355 IEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLT-SDGDTETQENAVTCILNLSI 413
Query: 171 SESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFT 230
E + K +++ G + S++ VL+ G+ ++R A L S+ +AD ++I
Sbjct: 414 YE-HNKELIMLAGA--VTSIVLVLRAGSMEARENAAATLFSL-SLADENKIIIGASGAIM 469
Query: 231 EIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCE 290
+V++L+ S + K A L LC + N+ +AV + R+ +
Sbjct: 470 ALVDLLQ---YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMAD 526
Query: 291 LMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARV 350
L +L +L + +L+ A + + + + + A IL +CK T ++
Sbjct: 527 EALTILSVLASNQVAKTAILRANA-IPPLIDCLQKDQPRNRENAAAILLCLCKRD-TEKL 584
Query: 351 LQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWR 391
+ + ++G V L + L D + + K +A +L+L ++ R
Sbjct: 585 IS-IGRLGAVVPL-MELSRDGTERAKRKANSLLELLRKSSR 623
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 316 (116.3 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 114/399 (28%), Positives = 185/399 (46%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F CPISL+LM+DPV VS+G TY+R I++WL + + TCP T+Q L T LT P
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDS-GHKTCPKTQQPLSHTSLT---P 283
Query: 66 NHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQ----------IVKILNDAKK-SPSTG 114
N L+ LI WC N GIE Q DK +V ++N + +
Sbjct: 284 NFVLKSLISQWCEAN---GIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQ 340
Query: 115 RKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESY 174
R +R + ++ NR C+ AGAI L +++ SD + E A++ L +L++ E+
Sbjct: 341 RAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQE--HAVTALLNLSIHENN 398
Query: 175 LKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVN 234
SIV ++ + ++ VLK G+ ++R A L S+ V D ++ ++N
Sbjct: 399 KASIVDSHA---IPKIVEVLKTGSMETRENAAATLFSL-SVVDENKVTIGAAGAIPPLIN 454
Query: 235 VLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLN 294
+L D S + K A + LC + N+++AV+ T + E L+
Sbjct: 455 LLCDG---SPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEA-LS 510
Query: 295 VLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEM 354
+L +L EG+ ++ + + + I S + A IL +C + T + L
Sbjct: 511 LLSILAGNPEGKI-VIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCS-ADTEQTLAAK 568
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDS 393
GV L L + + K +A IL+L +A DS
Sbjct: 569 A-AGVEDAL-KELSETGTDRAKRKASSILELMHQANEDS 605
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 305 (112.4 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 107/394 (27%), Positives = 184/394 (46%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
++P+ F+CPISL+ M+DPVT+ TG TY+R+NI +W F + TCP T Q L + + T
Sbjct: 63 DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKW-FNLGHLTCPTTMQELWDD---TVT 118
Query: 65 PNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGR-KCLRRLRS 123
PN TL LI W + +R Q + ++IL KK+ R L L+
Sbjct: 119 PNKTLHHLIYTWFSQKYVLMKKRSEDVQG-----RAIEILGTLKKAKGQARVHALSELKQ 173
Query: 124 ITLQSERNRSCLEAAGAIEFLATII---TKSDAGSDECDEALSILYHLNVSESYLKSIVI 180
I + R + G + +++++ T GS E ++IL L++ +S KS ++
Sbjct: 174 IVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGS----EVVAILVSLDL-DSDSKSGLM 228
Query: 181 NNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVAD-PFQLISVKQEFFTEIVNVLRDH 239
+ L ++ +L G+ +++ L++ + E +L+S ++ +++D
Sbjct: 229 QPAKVSL--IVDMLNDGSNETKINCARLIRGLVEEKGFRAELVS-SHSLLVGLMRLVKDK 285
Query: 240 HQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVLDLL 299
+ AL+LL + + R V + EL L VLD L
Sbjct: 286 RH--RNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSL-DPECLELALFVLDAL 342
Query: 300 CRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQVGV 359
C EGR + + + ++RVS ++ A+ IL SVCK A ++VG+
Sbjct: 343 CTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKL-APEECSPLAVEVGL 401
Query: 360 VSKLCLVLQVDASVKTKERAREILKLNARAWRDS 393
+KL LV+Q K+R+ E+LKL + + D+
Sbjct: 402 AAKLLLVIQSGCDAALKQRSAELLKLCSLHYSDT 435
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 107/394 (27%), Positives = 188/394 (47%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F CPISL++MRDPV VS+G TY+R IE+W+ ++TCP T+Q L T LT P
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWI-EGGHSTCPKTQQALTSTTLT---P 311
Query: 66 NHTLRRLIQAWCTINACHGIERIPTPQP--------PVDKTQIVKIL-NDAKKSPSTGRK 116
N+ LR LI WC N + + +P P + +I ++ A +P R
Sbjct: 312 NYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRS 371
Query: 117 CLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLK 176
+R + ++ NR + AGAI L +++ D+ E +++ L +L++ E+ K
Sbjct: 372 AAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQE--HSVTALLNLSICENN-K 428
Query: 177 SIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVL 236
+++ G + +++VLK G+ ++R A L S+ V D ++ +V +L
Sbjct: 429 GAIVSAGA--IPGIVQVLKKGSMEARENAAATLFSL-SVIDENKVTIGALGAIPPLVVLL 485
Query: 237 RDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVL 296
+ +Q+ K A L LC + N+ KA+ V E L +L
Sbjct: 486 NEG---TQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEA-LAIL 541
Query: 297 DLLCRCAEGRAELLKHGAGLAVVSK-KILRVSHAAS-DRAVRILCSVCKFSATARVLQEM 354
+L EG+A + G+ AV S + +R + + A +L +C S + L E
Sbjct: 542 AILSSHPEGKAII---GSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC--SGDPQHLVEA 596
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREILKLNAR 388
++G++ L + L + + + K +A ++L+ +R
Sbjct: 597 QKLGLMGPL-IDLAGNGTDRGKRKAAQLLERISR 629
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 281 (104.0 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 109/398 (27%), Positives = 188/398 (47%)
Query: 1 MEEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDL 60
+E E+P+ F+CPISL+ M+DPVT+ TG TY+R NI +W F + TCP T Q L + DL
Sbjct: 55 LELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKW-FNIGHCTCPTTMQELWD-DL 112
Query: 61 TSTTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGR-KCLR 119
TPN TL +LI W + +R Q + ++IL +K+ + L
Sbjct: 113 V--TPNKTLHQLIYTWFSQKYVLMKKRSEDVQG-----RAIEILGTLRKAKGKAKVHALS 165
Query: 120 RLRSITL-QSERNRSCLEAAGA--IEFLATIITKSDAGSDECDEALSILYHLNVSESYLK 176
L+ + + + ++ ++ G I L + T GS EA++IL +L + +S K
Sbjct: 166 ELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGS----EAIAILVNLEL-DSDSK 220
Query: 177 SIVINNGEEFLESLMRVLKCGNYQSRSYAIMLL-KSIFEVADPFQLISVKQEFFTEIVNV 235
+ ++ L ++ +L G+ +++ L+ + + E +L+S ++ +
Sbjct: 221 AGLMQPARVSL--MVDMLNDGSIETKINCARLIGRLVEEKGFRAELVS-SHSLLVGLMRL 277
Query: 236 LRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNV 295
++D + + AL LL + + R V + E L V
Sbjct: 278 VKDRRR--RNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCL-DVECLESALFV 334
Query: 296 LDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEML 355
LD LC +EGR L + + +++VS ++ A+ IL SVCK A+ +
Sbjct: 335 LDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKL-ASEECSSLAV 393
Query: 356 QVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDS 393
+VG+ +KL LV+Q K+R+ E+LKL + + DS
Sbjct: 394 EVGLAAKLLLVIQSGCDPALKQRSAELLKLCSLHYSDS 431
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 280 (103.6 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 101/390 (25%), Positives = 180/390 (46%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P +F CPISL+LM+DPV VSTG TY+R +I++WL + TCP +++ L LT P
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLLHAGLT---P 303
Query: 66 NHTLRRLIQAWCTIN---------ACHGIERIPTPQPPVDKTQIVKILND-AKKSPSTGR 115
N+ L+ LI WC N +C + + D+T ++ +L A + R
Sbjct: 304 NYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQR 363
Query: 116 KCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL 175
LR + ++ NR C+ AGAI L +++ D + E +++ L +L+++E
Sbjct: 364 AAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQE--HSVTALLNLSINEGN- 420
Query: 176 KSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
K +++ G + ++ VLK G+ ++R A L S+ V D ++ ++++
Sbjct: 421 KGAIVDAGA--ITDIVEVLKNGSMEARENAAATLFSL-SVIDENKVAIGAAGAIQALISL 477
Query: 236 LRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNV 295
L + +++ K A + LC + N+ +AV+ V E L +
Sbjct: 478 LEEG---TRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEA-LAI 533
Query: 296 LDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEML 355
L +L EG+ + + + V+ + I S + A IL +C R L
Sbjct: 534 LAILSTNQEGKTAIAE-AESIPVLVEIIRTGSPRNRENAAAILWYLC-IGNIER-LNVAR 590
Query: 356 QVGVVSKLCLVLQVDASVKTKERAREILKL 385
+VG L L + + + K +A +L+L
Sbjct: 591 EVGADVAL-KELTENGTDRAKRKAASLLEL 619
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 275 (101.9 bits), Expect = 9.2e-22, P = 9.2e-22
Identities = 84/303 (27%), Positives = 150/303 (49%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P FLCPI+L++M DPV ++TG TY++ +I++W F + TCP T+Q E D S P
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKW-FDAGHKTCPKTRQ---ELDHLSLAP 345
Query: 66 NHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG--RKCLRRLRS 123
N L+ LI WC N E+ +P ++ V +L +A S R+ ++++R
Sbjct: 346 NFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRL 405
Query: 124 ITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVINNG 183
+ ++ NR + AGAI L +++ D+G E A++ L +L++ E K ++ N G
Sbjct: 406 LARENPENRVLIANAGAIPLLVQLLSYPDSGIQE--NAVTTLLNLSIDEVN-KKLISNEG 462
Query: 184 EEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHHQFS 243
+ +++ +L+ GN ++R + L S+ + D ++ +V++L+ H +
Sbjct: 463 A--IPNIIEILENGNREARENSAAALFSL-SMLDENKVTIGLSNGIPPLVDLLQ--HG-T 516
Query: 244 QQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVLDLLCRCA 303
+ K AL L L N+ +A++ + E L++L LL
Sbjct: 517 LRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEA-LSILLLLASHP 575
Query: 304 EGR 306
EGR
Sbjct: 576 EGR 578
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 254 (94.5 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 86/322 (26%), Positives = 149/322 (46%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
++P F CPISL++M DPV + +G T+DRV+I++W+ + N TCP+TK L ET
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDS-GNRTCPITKLPLSETPYL--I 60
Query: 65 PNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQ-IVKILNDAKKSPSTGRKCLRRLRS 123
PNH LR LI + ++ + ++Q ++ L S ++ + L RL
Sbjct: 61 PNHALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120
Query: 124 ITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVINNG 183
+T + R + +GA+ + + E ++LS+L +L++ + +V +
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQE--KSLSLLLNLSLEDDNKVGLVADG- 177
Query: 184 EEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHHQFS 243
+ ++ VL+ G+ ++ A LL S+ V I + + +V++LR +
Sbjct: 178 --VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRE 235
Query: 244 QQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVLDLLCRCA 303
++ S AL LC + NR + V+ ER V VL LL +C
Sbjct: 236 RKESATAL---YALCSFPDNRKRVVDCGSVPILVEAADSGLERAV-----EVLGLLVKCR 287
Query: 304 EGRAELLKHGAGLAVVSKKILR 325
GR E+ K +G V +LR
Sbjct: 288 GGREEMSKV-SGFVEVLVNVLR 308
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 263 (97.6 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 102/402 (25%), Positives = 182/402 (45%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I VP F+CPISL LM DPV +STG TYDR +I RW+ + TCP T Q+L ++ +
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEE-GHCTCPKTGQMLMDSRIV-- 359
Query: 64 TPNHTLRRLIQAWCTINAC-HGIERIPTPQP------PV------DKTQI---VKILNDA 107
PN L+ LI WCT + + E +P P +K + +K L D
Sbjct: 360 -PNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADG 418
Query: 108 KKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYH 167
++ T R +R + + NR+ + AGAI L ++T +A + E +++ + +
Sbjct: 419 SQAAQT--VAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQE--NSVTAMLN 474
Query: 168 LNVSESYLKSIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQ 226
L++ E KS ++ G+ LES++ VL G +++ A L S+ V + + I++
Sbjct: 475 LSIYEKN-KSRIMEEGD-CLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVD 532
Query: 227 EFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTER 286
+ + +L++ + + K A+ L L N + +E
Sbjct: 533 QCVEALALLLQNG---TPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALK---NE 586
Query: 287 RVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSA 346
V E L LL R + G + K + +A + + + + AV L +C+ S
Sbjct: 587 GVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCR-SG 645
Query: 347 TARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNAR 388
A V +++L+ ++ L L + + + +A + ++ R
Sbjct: 646 GAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQR 687
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 185 (70.2 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+ + A F CP+SL++M DPV VS+G TY++ I+RW+ CP T+Q L T L
Sbjct: 231 VAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI-DLGLKVCPKTRQTLTHTTLI-- 287
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG 114
PN+T++ LI WC N ++P P ++ +L+ PSTG
Sbjct: 288 -PNYTVKALIANWCETNDV----KLPDPNKSTSLNELSPLLSCTDSIPSTG 333
Score = 112 (44.5 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 62/289 (21%), Positives = 127/289 (43%)
Query: 97 KTQIVKILNDAKKSP-STGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGS 155
+TQ+ K++ + K S T R+ LR + + NR + +GAI L ++ +D+ +
Sbjct: 543 ETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSAT 602
Query: 156 DECDEALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEV 215
E A++ L +L+++++ K+I + G +E L+ VL+ G+ +++ + L S+ +
Sbjct: 603 QE--NAVTALLNLSINDNNKKAIA-DAGA--IEPLIHVLENGSSEAKENSAATLFSLSVI 657
Query: 216 ADPFQLISVKQE-FFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXX 274
+ I + Q +V++L + + + K A L L N+ V+
Sbjct: 658 EE--NKIKIGQSGAIGPLVDLLGNG---TPRGKKDAATALFNLSIHQENKAMIVQSGAVR 712
Query: 275 XXXXXXXXXTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRA 334
+ + + VL L EGR + + G G+ ++ + + S + A
Sbjct: 713 YLIDLMDPAAG--MVDKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENA 769
Query: 335 VRILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREIL 383
L + S R +LQ G V L + L + + +E+A+ +L
Sbjct: 770 AAALLQLSTNSG--RFCNMVLQEGAVPPL-VALSQSGTPRAREKAQALL 815
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 240 (89.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 78/265 (29%), Positives = 134/265 (50%)
Query: 1 MEEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDL 60
+ + +PA F CPI+L+LMRDPV V+TG TYDR +I+ W+ + +NTCP T QVL+ T L
Sbjct: 269 LSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQS-GHNTCPKTGQVLKHTSL 327
Query: 61 TSTTPNHTLRRLIQAWCT-------INACHGIERIPTPQPPVDKTQIVKILNDAKKSPST 113
PN L+ LI WC + G E P + V+ T+++ K S +
Sbjct: 328 V---PNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEA-VEFTKMMVSFLIEKLSVAD 383
Query: 114 GRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSES 173
+ LR++ R+C+ AGAI L + ++ S + + +IL +L++ E
Sbjct: 384 SNGVVFELRALAKSDTVARACIAEAGAIPKLVRYLA-TECPSLQINAVTTIL-NLSILEQ 441
Query: 174 YLKSIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEI 232
I+ +G L ++ VL+ G +++++ A L S+ V+ + + K + +
Sbjct: 442 NKTRIMETDGA--LNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGL 499
Query: 233 VNVLRDHHQFSQQ-ASKAALKLLVE 256
V++ + S++ A A L L+ E
Sbjct: 500 VDLAKQGPTSSKRDALVAILNLVAE 524
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 224 (83.9 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 99/380 (26%), Positives = 172/380 (45%)
Query: 1 MEEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDL 60
+E + P F CP+S +LMRDPV +++G TYD++ I++WL + N TCP T+QVL T L
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWL-SSGNRTCPKTQQVLPHTAL 127
Query: 61 TSTTPNHTLRRLIQAWCTINACHGIERIPTPQPP-VDKTQIV-----KILND--AKKSPS 112
T PN +R +I WC N G+E P V++ + V +I N K S S
Sbjct: 128 T---PNLLIREMISKWCKKN---GLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSS 181
Query: 113 T---GRKCLRRLRSITLQSERNRSCL-EAAGAIEFLATIITKSDAGSDECDE-ALSILYH 167
+ + LR +T + R+ E+ I L + ++ E ++ L +
Sbjct: 182 NLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLN 241
Query: 168 LNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQE 227
+++ + K +V N + L+ L+ G +RS A + ++ D +++ K
Sbjct: 242 ISIHDDSNKKLVCEN-PNVIPLLIDALRRGTVATRSNAAAAIFTL-SALDSNKVLIGKSG 299
Query: 228 FFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERR 287
++++L + + + + AA+ LC NR +AV
Sbjct: 300 ILKPLIDLLEEGNPLAIKDVAAAI---FTLCIAHENRSRAVRDGAVRVLGKKISNGLY-- 354
Query: 288 VCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDR--AVRILCSVCKFS 345
V EL L +L +L + EL + G G++ + K I R S ++ A+ IL ++C
Sbjct: 355 VDEL-LAILAMLVTHWKAVEELGELG-GVSWLLK-ITRESECKRNKENAIVILHTICFSD 411
Query: 346 ATA--RVLQEMLQVGVVSKL 363
T + +E G ++KL
Sbjct: 412 RTKWKEIKEEENAHGTITKL 431
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 216 (81.1 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 89/323 (27%), Positives = 149/323 (46%)
Query: 85 IERIPTPQ---PPVDKTQIVKILNDAKKSPSTGRKCLR---RLRSITLQSERNRSCLEAA 138
IERI +P+ P D +I + L +A +CL +++++ + N+ CL
Sbjct: 40 IERIQSPRVLLTPRDAVEISRRLQNAAAREEYA-ECLEIVSKIKNLGRGGDTNKKCLVQN 98
Query: 139 GAIEFLATIITKSDAGSDE----CDEALSILYH---LNVSESYLKSIVINNGEEFLESLM 191
G++ L++ + A D +E L +L LN SE + K L L+
Sbjct: 99 GSVLALSSCFERFAAARDGHMRLLEEILFVLSSWLPLNRSEGFNKM----GSTASLNCLV 154
Query: 192 RVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTE-IVNVLRDHHQFSQQASKAA 250
R L + ++R A ++ + V + E E +V ++RD S ++KA+
Sbjct: 155 RFLNGKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACEGLVKIIRD--SVSTSSTKAS 212
Query: 251 LKLLVELCPWGRNRI--KAVEXXXXXXXXXXXXXXTERRVCELMLNVLDLLCRCAEGRAE 308
L ++ ++I K V+ E+ VCE L VL+ C +G+ +
Sbjct: 213 LMVIYRAIS-SNDKITEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKED 271
Query: 309 LLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATA----RVLQEMLQVGVVSKLC 364
+L++ + ++ KKILRVS A+ +V IL + K R+L E LQVG KL
Sbjct: 272 VLRNALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLL 331
Query: 365 LVLQVDASVKTKERAREILK-LN 386
++LQV KTKE+A E+L+ LN
Sbjct: 332 VLLQVGCEDKTKEKASELLRNLN 354
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 77/262 (29%), Positives = 130/262 (49%)
Query: 11 LCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPNHTLR 70
LCPISL++M DPV + TG TYDR +I +W F N TCP+T ++L T+L N ++R
Sbjct: 293 LCPISLEIMTDPVVIETGHTYDRSSITKW-FGSGNITCPITGKILTSTELVD---NVSVR 348
Query: 71 RLIQAWCTINAC--HGIERIPTPQPPVDKTQIV-----KILNDAKKSP--STGRKCL-RR 120
++I+ C N GI R V + K++ S + G + + R
Sbjct: 349 QVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRA 408
Query: 121 LRSITLQSER---NRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL-K 176
+R I +Q++ NRSCL AGA+ L +++ D E A++ + LN+S+ K
Sbjct: 409 VREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQE--NAMAGI--LNLSKHVTGK 464
Query: 177 SIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
S + G L+ L+ +L G ++R Y+ L + V D +LI + ++N+
Sbjct: 465 SKIAGEG---LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNI 521
Query: 236 LRDHHQFSQQASKAALKLLVEL 257
++ + A ++AL ++ L
Sbjct: 522 VKGD-DYGDSAKRSALLAVMGL 542
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 208 (78.3 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 85/356 (23%), Positives = 154/356 (43%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+EVP F+C +S ++M +P+ +++G T+++ I WL TCP TKQVL +
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK--HERTCPRTKQVLYHRFMI-- 118
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDK-TQIVKILNDAKKSPSTGRKCLRRLR 122
PNH + +I+ WC I H +R T +D T ++ L SPS+ +
Sbjct: 119 -PNHLINEVIKEWCLI---HNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAK 174
Query: 123 SITLQSERNRS-CLEAAGAI-EFLATIITKSDAGSDECDEAL-SILYHLNV-SESYLKSI 178
+ L+++R S C+ I + + ++T D E L +I+ L++ S S
Sbjct: 175 ELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKNKT 234
Query: 179 VINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRD 238
++ L L + +K G +R ++ + S+ D ++I E +++V+ +
Sbjct: 235 LVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSL-SYTDSNKIIIGNSEVLKALIHVIEE 293
Query: 239 HHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVLDL 298
A+ A L LCP KAV + ++L++L
Sbjct: 294 GDSL---ATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSN---VSMLLSLLAF 347
Query: 299 LCRCAEGRAELLKHGAGLAVVSKKILRVSHAA--SDRAVRILCSVCK-FSATARVL 351
+ E + + GL ILR S++ + AV I+ ++CK + A V+
Sbjct: 348 VSTQNHQTTEEMDN-LGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVV 402
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 188 (71.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 71/271 (26%), Positives = 130/271 (47%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+EVP F C +S +M DPV + +G TY++ I WL + TCP KQVL LT
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN--HDLTCPTAKQVLYRVCLT-- 127
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPP-VDK-TQI----VKILNDAKKSPSTG-RK 116
PNH + LI WC N +R P P+P +D T++ ++ L SPS+
Sbjct: 128 -PNHLINELITRWCLANK---YDR-PAPKPSDIDYVTELFTDGIESLLQRISSPSSSVAD 182
Query: 117 CLRRLRSITLQSE-----RNRSCLEAAGAIEFLATIIT----KSDAGSDECDEALSILYH 167
+ + LQ+E R+ E +I L T ++ + D+ + + ++ L++
Sbjct: 183 QTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFN 242
Query: 168 LNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQE 227
++ E K+++ N + + L + +K G+ +R A + L S+ ++ D ++I
Sbjct: 243 MSTFEKN-KTVLAEN-HQVIPLLAKSMKQGSVVTRRNATLTLASLSDI-DSNKIIIGNSV 299
Query: 228 FFTEIVNVLRDHHQFSQQASKAALKLLVELC 258
+++++ + S A+ AL +++LC
Sbjct: 300 ALKALIDLIGELDDLS--ATHDALCAVIDLC 328
Score = 58 (25.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 295 VLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEM 354
V+DL C E + + GLA + K ++ A L ++ S RV+QE+
Sbjct: 324 VIDLCCDERENWKKAIS--LGLAPAAIKNIK----ARRNLFESLAALALISPHERVIQEV 377
Query: 355 LQVGVVSKLCLVLQVDASVKTKERA 379
+GV+ L +L+ + + T E A
Sbjct: 378 ANLGVIYDLLSILRKTSCMVTCENA 402
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 207 (77.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 66/190 (34%), Positives = 97/190 (51%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P CPISLQLM DPV +++G TY+RV IE+W F+ +NTCP T+Q L LT PN
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKW-FSDGHNTCPKTQQQLPHISLT---PN 328
Query: 67 HTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKI-LNDAKKSPSTGRKCLRRLRSIT 125
+ ++ LI +WC N +IP+ P ++ L+D S ST + + + S
Sbjct: 329 NCVKGLIASWCEQNGT----QIPSGPPESQDLDYWRLALSD---SESTKSQSVNSIGSYK 381
Query: 126 LQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVINNGEE 185
L+ + LE G + T+ SD+ DE S +NV E Y + + N EE
Sbjct: 382 LKGVKIVP-LEENGTT-VVERQNTEESFVSDDDDEEDS---DINVLERYQDLLAVLNEEE 436
Query: 186 FLESLMRVLK 195
LE +V++
Sbjct: 437 GLEKKCKVVE 446
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 205 (77.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 88/347 (25%), Positives = 153/347 (44%)
Query: 12 CPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPNHTLRR 71
CPISL++M DPV + +G TYDR +I +W F N TCP T + L T L N ++++
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKW-FASGNITCPKTGKTLVSTVLVD---NFSVKQ 339
Query: 72 LIQAWCTINAC----HGIERIPTPQP----PVDKTQIVKILNDAKKSPSTGR-KCLRRLR 122
+IQ++ N G +++ + K + + K K L +R
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIR 399
Query: 123 SITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL-KSIVIN 181
+T S RSCL AG +E L I+ D E A++ + +N+S+ K+ ++
Sbjct: 400 ILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQE--NAMAGI--MNLSKDIAGKTRIVG 455
Query: 182 NGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLR--D 238
L ++ VL G +SR YA L + + D +LI + +V +++ D
Sbjct: 456 EDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCD 515
Query: 239 HHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVLDL 298
+ +++ + A++ L+ P RI A ++ + M +L
Sbjct: 516 YGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMA-ILAK 574
Query: 299 LCRCAEGRAELLKHGAGLAVVSKKIL---RVSHAASDRAVRILCSVC 342
+ +G +L+ G GL + + KIL VS A V +L ++C
Sbjct: 575 MAEYPDGMISVLRRG-GLKL-AVKILGSSEVSPATKQHCVALLLNLC 619
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 97/405 (23%), Positives = 181/405 (44%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
VP F CPISL LMRDPV STG TYDR +I +W+ ++TCP + Q L + L P
Sbjct: 297 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEE-GHSTCPNSGQTLADHRLV---P 352
Query: 66 NHTLRRLIQAWCTI--------NACHGI-ERIP---TPQPPVDKTQ-----IVKILNDAK 108
N LR LI WC + + G+ E + + + ++ + +V++L D
Sbjct: 353 NRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDG- 411
Query: 109 KSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHL 168
S + + +R + ++NR+ + GAI L ++ +D + E A++ L +L
Sbjct: 412 -SENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQE--NAVTALLNL 468
Query: 169 NVSESYLKSIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQE 227
++ E I+ G L ++ VL+ G +++ A L S+ V + +LI +
Sbjct: 469 SIFEPNKGRIMEQEG--CLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPG 526
Query: 228 FFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERR 287
E+ ++L + + + K A+ L L + + +E T
Sbjct: 527 AVEELASMLT---KGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDT--- 580
Query: 288 VCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKI---LRVSHAASDRAVRILCSVCKF 344
V E L LL + L+ G+ V++ + R + + AV L +C+
Sbjct: 581 VSEEAAGALALLMK-QPSIVHLV--GSSETVITSLVGLMRRGTPKGKENAVSALYEICRR 637
Query: 345 SATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARA 389
+A V Q + ++ ++ + + ++ + + K++A I+K+ R+
Sbjct: 638 GGSALV-QRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRS 681
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 179 (68.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 67/275 (24%), Positives = 124/275 (45%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+EVP F+C +S +M +PV +++G TY++ I WL TCP TKQVL
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK--HERTCPKTKQVLSHR---LW 124
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDK-TQIVKILNDAKKSPSTGRKCLRRLR 122
PNH + LI WC +N + P+ + + T ++ L S S+ + +
Sbjct: 125 IPNHLISDLITQWCLVNKYD--HQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAK 182
Query: 123 SITLQSER--NRSCLEAAGAIEFLATIITKSDAGSDECDEALSI-------LYHLNVSES 173
+ Q+++ N AG + + +++ + D +L + L++L++ ES
Sbjct: 183 ELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILES 242
Query: 174 YLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIV 233
K+++ N + L + LK G ++R A L S+ + D ++I E ++
Sbjct: 243 N-KTVIAENCL-VIPLLTKSLKQGTDETRRNAAATLSSLSAI-DSNKIIIGNSEAVKALI 299
Query: 234 NVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAV 268
+++ + A+K A + LC N+ K V
Sbjct: 300 DLIEEGDLL---ATKEATSTVFNLCIVLENKGKVV 331
Score = 56 (24.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 299 LCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQVG 358
LC E + +++ G + +KKI S+ D + +L + S R ++EM ++G
Sbjct: 320 LCIVLENKGKVVSAGL-IHAATKKIKAGSNV--DELLSLLALI---STHNRAVEEMDKLG 373
Query: 359 VVSKLCLVLQVDASVKTKERA 379
+ L +L+ +S+ T E A
Sbjct: 374 FIYDLFSILRKPSSLLTGENA 394
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 131 (51.2 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 37/116 (31%), Positives = 60/116 (51%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQET--DLTS 62
E P FLCPI+ LM DPV VS+G T++R++++ C+N +L T DL++
Sbjct: 30 ETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQ----VCRN--LGYIPDLLDGTRPDLST 83
Query: 63 TTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQI---VKILNDAKKSPSTGR 115
PN ++ I +WC +++ P+PP D + V+ D +PS G+
Sbjct: 84 VIPNLAMKSTIFSWCDR------QKVDHPRPP-DAAYVEGVVRARMDKDPNPSPGQ 132
Score = 111 (44.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 64/269 (23%), Positives = 123/269 (45%)
Query: 121 LRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVI 180
LR +T SE R L + FL +++ S + + A S++ +L++ E K ++
Sbjct: 258 LRKMTRSSEDLRVSLCTDRILSFLRSLLV-SRYNLVQTNAAASVV-NLSL-EKQNKVKIV 314
Query: 181 NNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHH 240
+G F+ L+ VLK G +++ + L S+ + D +++ +++ LR
Sbjct: 315 RSG--FVPLLIDVLKSGTTEAQEHVAGALFSL-ALEDENKMVIGVLGAVEPLLHALRSSE 371
Query: 241 QFSQQASK-AALKLL-VELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVLDL 298
S++A + AAL L + L P R R+ T R +L VL
Sbjct: 372 --SERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSR-----ILLVLCN 424
Query: 299 LCRCAEGRAELLKHGAGLAVVSKKILRV----SHAASDRAVRILCSVCKFSATARVLQEM 354
L C +G+ +L G +A++ K+ V S AA + V +L ++C+ + R L
Sbjct: 425 LAACPDGKGAMLD-GNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLAS- 482
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREIL 383
+ G ++ + ++ + + + KE+A +IL
Sbjct: 483 -EAGA-EEVLMEVEENGNERVKEKASKIL 509
Score = 73 (30.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 29/113 (25%), Positives = 58/113 (51%)
Query: 97 KTQIVKILNDAKKSPSTGRK--CLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAG 154
++ V +L D KS +T + L S+ L+ E N+ + GA+E L + S++
Sbjct: 315 RSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDE-NKMVIGVLGAVEPLLHALRSSESE 373
Query: 155 SDECDEALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIM 207
D AL+ LYHL++ S ++ ++ G + +L+ +++ G+ SR ++
Sbjct: 374 RARQDAALA-LYHLSLIPSN-RTRLVRAGA--VPTLLSMVRSGDSTSRILLVL 422
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 137 (53.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKN-NTCPVTKQVLQETDLTST 63
E P FLCPI+ LM DPV V++G T++R++++ C+N + P Q DL++
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQ----VCRNLSFAPKLHDGTQP-DLSTV 63
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKS--PSTGRKCLRR- 120
PN ++ I +WC N ++ P+PP D + ++ S P +G + +
Sbjct: 64 IPNLAMKSTILSWCDRN------KMEHPRPP-DYAYVEGVVRTRMDSLPPGSGHRIAKSE 116
Query: 121 -LRSITLQSERNRSCLEAAGAI 141
L + S N GAI
Sbjct: 117 ILPPVAENSNSNSDYDSVMGAI 138
Score = 97 (39.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 68/274 (24%), Positives = 124/274 (45%)
Query: 118 LRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
L +LR T +E R L + L ++I S + + A SI+ +L++ E K
Sbjct: 204 LIQLRKTTRSNETTRISLCTDRILSLLRSLIV-SRYNIVQTNAAASIV-NLSL-EKPNKL 260
Query: 178 IVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLR 237
++ +G F+ L+ VLK G+ +++ + I L S+ + +I V +++ LR
Sbjct: 261 KIVRSG--FVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAV-EPLLHALR 317
Query: 238 DHHQFSQQASK-AALKLL-VELCPWGRNR-IKAVEXXXXXXXXXXXXXXTERRVCELMLN 294
S++A + AAL L + L P R+R +KA + R+ L+ N
Sbjct: 318 SSE--SERARQDAALALYHLSLIPNNRSRLVKA--GAVPMMLSMIRSGESASRILLLLCN 373
Query: 295 VLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILC--SVCKFSA-TARVL 351
L C+EG+ +L G ++++ K+ A SD A R C ++ S R
Sbjct: 374 ----LAACSEGKGAMLD-GNAVSILVGKLRESGGAESDAAARENCVGALLTLSVGNMRFR 428
Query: 352 QEMLQVGVVSKLCLVLQVDA-SVKTKERAREILK 384
+ G L +++ ++ S + KE+A +IL+
Sbjct: 429 GLASEAGAEEILTEIVESESGSGRLKEKASKILQ 462
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 58/160 (36%), Positives = 88/160 (55%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P CPISLQLM DPV +++G TY+RV IE+W F+ +N+CP T+Q L LT PN
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKW-FSDGHNSCPKTQQQLPHLSLT---PN 331
Query: 67 HTLRRLIQAWCTINACHGIERIPT-PQPPVDKTQIVKILNDAKKSPSTGRKCLRRLRSIT 125
+ ++ LI +WC N GI +PT P +D ++D++ SP++ K + + T
Sbjct: 332 YCVKGLIASWCEQN---GIT-VPTGPPESLDLNYWRLAMSDSE-SPNS--KSVDSVGLCT 384
Query: 126 LQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSIL 165
+ R LE + IE K++A DE D +++L
Sbjct: 385 PKDIRVVP-LEESSTIESERQQKEKNNA-PDEVDSEINVL 422
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 68/299 (22%), Positives = 128/299 (42%)
Query: 103 ILNDAKKSPSTGRKC--LRRLRSITLQSERNRSCLEAAGAIE----FLATIITKSDAGSD 156
IL K +KC + +R + +E R + A G +E FL + + ++A +
Sbjct: 428 ILAIVDKEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQ 487
Query: 157 ECDEALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVA 216
E A++ L++L V+ + K +++ +G + L +++ C Q + A+ L S E A
Sbjct: 488 ETG-AMA-LFNLAVNNNRNKELMLTSG--VIPLLEKMISCSQSQGPATALYLNLSCLEKA 543
Query: 217 DPFQLISVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXX 276
P S FF ++ L+D Q AL L L + N I +
Sbjct: 544 KPVIGSSQAVSFFVNLL--LQDT---KTQCKLDALHALYNLSTYSPN-IPTLLSSNIIKS 597
Query: 277 XXXXXXXTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVR 336
E L VL L EG+ E++ ++ ++ + ++AV
Sbjct: 598 LQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVS 657
Query: 337 ILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKL-NARAWRDSP 394
L +C S + +Q +LQ GV+ L + + V+ S + +++++++L L + RD P
Sbjct: 658 CLVILCTGSESC--IQMVLQEGVIPSL-VSISVNGSPRGRDKSQKLLMLFREQRHRDQP 713
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 51/141 (36%), Positives = 76/141 (53%)
Query: 3 EIEVPAHFL-CPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
++ VP L CPISLQLM DPV +++G TY+R+ IE+W F+ +NTCP T Q L LT
Sbjct: 275 QMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKW-FSDGHNTCPKTHQQLSHLCLT 333
Query: 62 STTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRL 121
PN+ ++ LI +WC N G++ P P + + S ST + +R+
Sbjct: 334 ---PNYCVKALISSWCEQN---GVQ---VPDGPPESLDLNYWRLALSVSESTDTRSAKRV 384
Query: 122 RSITLQSERNRSCLEAAGAIE 142
S L+ + LE +G I+
Sbjct: 385 GSCKLKDVKVVP-LEESGTIK 404
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 179 (68.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 55/175 (31%), Positives = 82/175 (46%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I +P +F CP+S +LM DPV V++G T+DR +I++WL CP T+QVL +L
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLA-VCPRTRQVLTHQELI-- 292
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLR-RLR 122
PN+T++ +I +W N I D + N+ + R LR
Sbjct: 293 -PNYTVKAMIASWLEANR---INLATNSCHQYDGGDASSMANNMGSQDFNRTESFRFSLR 348
Query: 123 SITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
S +L S RS LE E L ++ S G + + L I L+ +SY S
Sbjct: 349 SSSLTS---RSSLETGNGFEKLKINVSASLCGESQSKD-LEIFELLSPGQSYTHS 399
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 65/294 (22%), Positives = 129/294 (43%)
Query: 101 VKILNDAKK-SPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECD 159
+K++ D K S +R +T+ S NR + GAI L +++ + + E
Sbjct: 475 IKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQE-- 532
Query: 160 EALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPF 219
A++ L +L++SE K++++ G +E L+ VL GN +++ + L S+ +
Sbjct: 533 HAVTALLNLSISELN-KAMIVEVGA--IEPLVHVLNTGNDRAKENSAASLFSLSVLQVNR 589
Query: 220 QLISVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXX 279
+ I +VN+L + + + K A L L N+ + V+
Sbjct: 590 ERIGQSNAAIQALVNLLG---KGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVEL 646
Query: 280 XXXXTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILC 339
E + + + +L L EGR +++ G G+ ++ + + S + A +L
Sbjct: 647 LDPDLE--MVDKAVALLANLSAVGEGRQAIVREG-GIPLLVETVDLGSQRGKENAASVLL 703
Query: 340 SVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDS 393
+C S L +LQ G + L + L + + KE+A+++L + R RD+
Sbjct: 704 QLCLNSPKFCTL--VLQEGAIPPL-VALSQSGTQRAKEKAQQLLS-HFRNQRDA 753
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 145 (56.1 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 10 FLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNN----TCPVTKQVLQETDLTSTTP 65
F+CP++ Q+M +PVT+ G T++R IE+W C+ N +CP+T + L TDL+ P
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLS---P 85
Query: 66 NHTLRRLIQAW 76
+ LR I+ W
Sbjct: 86 SIALRNTIEEW 96
Score = 71 (30.1 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 82 CHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKC--LRRLRSITLQSERNRSCLEAAG 139
C I +I + V Q+V+++ D KS S +C L+ L+ + E +++ +
Sbjct: 132 CRNIRKI---RQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGD 188
Query: 140 AIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSI 178
+ + +++ + E A+S+L+ L+ SE+ + I
Sbjct: 189 TVRTIVKFLSQEPSKGREA--AVSVLFELSKSEALCEKI 225
Score = 61 (26.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 37/157 (23%), Positives = 75/157 (47%)
Query: 100 IVKILNDAKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIE---FLATIITKSDAGS- 155
IVK L+ + PS GR+ S+ + ++ + E G+I L +T S + +
Sbjct: 193 IVKFLS---QEPSKGREAAV---SVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENV 246
Query: 156 DECDEALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSR-SYAIMLLKSIFE 214
++A L +L SE ++ + IN G L+ L+ L G+ +++ S A L +
Sbjct: 247 STVEKADKTLTNLERSEENVRQMAIN-GR--LQPLLAKLLEGSPETKVSMAFYL--GVLA 301
Query: 215 VADPFQLISVKQEFFTEIVNVLRDHHQFSQQASKAAL 251
+ + ++I V Q + +++++R ++A+ AL
Sbjct: 302 LNNDVKVI-VAQTVGSSLIDLMRTRDMSQREAALGAL 337
Score = 39 (18.8 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 208 LLKSIFEVADPFQL-ISVKQEFFTEIVNVLRDHHQFSQ 244
L+K +F V P QL I +K+ T + N++ + F +
Sbjct: 359 LIKDLFYVG-PNQLPIRLKEVSATILANIVNIGYDFDK 395
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 166 (63.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 45/154 (29%), Positives = 78/154 (50%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+ VP+ F C +SL+LM DPV V++G T++RV I++W+ CP T+Q L T LT
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWI-DMGLMVCPKTRQALSHTTLT-- 294
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRLRS 123
PN +R + +WC N + P P + ++ +L ++ ++ S+ L +
Sbjct: 295 -PNFIVRAFLASWCETNNVYP----PDPLELIHSSEPFPLLVESVRASSSENGHSESLDA 349
Query: 124 ITLQSERNRSCLEAAGAI-EFLATIITKSDAGSD 156
L+ +RS A G + E + ++A +D
Sbjct: 350 EELRQVFSRSA-SAPGIVSEVVCKTKRNNNAAAD 382
Score = 128 (50.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 66/299 (22%), Positives = 132/299 (44%)
Query: 97 KTQIVKILNDAKKSP-STGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGS 155
+T++ K+++D K S T R+ R+R + S NR + AI L +++ +D
Sbjct: 420 ETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERI 479
Query: 156 DECDEALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQ-SRSYAIMLLKSIFE 214
+A++ L +L+++++ KS++ +G + L+ VLK G + +++ + L S+
Sbjct: 480 QA--DAVTCLLNLSINDNN-KSLIAESGA--IVPLIHVLKTGYLEEAKANSAATLFSL-S 533
Query: 215 VADPFQLISVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXX 274
V + ++ + +V++L S K A L L N+ K +E
Sbjct: 534 VIEEYKTEIGEAGAIEPLVDLLGSG---SLSGKKDAATALFNLSIHHENKTKVIEAGAVR 590
Query: 275 XXXXXXXXXTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRA 334
+ E + VL L EG+ + + G G+ V+ + + S + A
Sbjct: 591 YLVELMDPAFG--MVEKAVVVLANLATVREGKIAIGEEG-GIPVLVEVVELGSARGKENA 647
Query: 335 VRILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDS 393
L +C S + +++ GV+ L + L + + KE+A+ +LK +A R S
Sbjct: 648 TAALLQLCTHSP--KFCNNVIREGVIPPL-VALTKSGTARGKEKAQNLLKY-FKAHRQS 702
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 140 (54.3 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F C +S +M DPV +S+G T++R+ I++W F N++CP++K+ L + L P
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKW-FDEGNDSCPISKRKLDDFTLK---P 274
Query: 66 NHTLRRLIQAWCTIN 80
N L+ I WC N
Sbjct: 275 NVELKSQISEWCAKN 289
Score = 70 (29.7 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 128 SERNRSCL-EAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVINNGEEF 186
+E+ R C+ E + +A ++ +S+ +E + A+SIL L V + +V+ +
Sbjct: 572 TEKGRGCITETPDCLASIAELL-ESNV-PEEQENAISILLQLCVQKIEYCCLVVREATDI 629
Query: 187 LESLMRVLKCGNYQSRSYAIMLLKSIFEV 215
SL+ + G + + A LL+++ EV
Sbjct: 630 YSSLILISNNGTEEVKVSASELLRALVEV 658
Score = 59 (25.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 28/143 (19%), Positives = 57/143 (39%)
Query: 226 QEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTE 285
+ T + N L + + + + K L LL+ R I+++E
Sbjct: 420 EPLITYLKNAL-ERNGTAGEIIKGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLESEV- 477
Query: 286 RRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFS 345
V E LN+L++L G +++ G+ +S + V A + + ++ S
Sbjct: 478 --VAEEALNILEVLSNHPHGPSKITSSGS----LSSLLKIVESQAEHLQEQAMITLKNLS 531
Query: 346 ATARVLQEMLQVGVVSKLCLVLQ 368
++ + EM+ + + KL LQ
Sbjct: 532 SSMEICLEMVSLDFIQKLTSFLQ 554
Score = 53 (23.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 289 CELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVC--KFSA 346
C+ + +L LC +GR + + LA +++ + + A+ IL +C K
Sbjct: 559 CKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEY 618
Query: 347 TARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILK 384
V++E + S L L+ + + + K A E+L+
Sbjct: 619 CCLVVREATDI--YSSLILISN-NGTEEVKVSASELLR 653
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P FLCPI+ ++M+DPV + G +Y+R IE W+ T KN T P+T LQ T LT PN
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWIST-KNRTSPMTNLPLQTTLLT---PN 473
Query: 67 HTLRRLIQAWCT 78
TL+ I W T
Sbjct: 474 RTLKMAIFRWST 485
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 141 (54.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 38/113 (33%), Positives = 58/113 (51%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKN-NTCPVTKQVLQET-D 59
+E + P FLCPIS +M DPV VS+G T++RV ++ C++ N P + D
Sbjct: 29 QEQQPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQ----VCRDLNFIPKLNDDEESLPD 84
Query: 60 LTSTTPNHTLRRLIQAWC-TINACHGIERIPTPQPPVDKTQIVKILNDAKKSP 111
++ PN ++ I WC T+ G+ R PQPP D + + +IL P
Sbjct: 85 FSNIIPNLNMKSTIDTWCDTV----GVSR---PQPP-DYSTVERILRQQMPPP 129
Score = 61 (26.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/230 (23%), Positives = 93/230 (40%)
Query: 161 ALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQ 220
AL+ L +L++ + K ++ G F+ L+ VLK G+ +++ +A + S+ D
Sbjct: 286 ALASLVNLSLDKKN-KLTIVRLG--FVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKM 342
Query: 221 LISVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXX 280
I V +++ LR + +AL L L NR K V
Sbjct: 343 PIGVLGAL-QPLLHALRAAES-DRTRHDSALALY-HLTLNQTNRSKLVRLGAVPALFSMV 399
Query: 281 XXXTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKK----ILRVSHAASDRAVR 336
+L + +L C C+EGR+ +L A +V K + A S + R
Sbjct: 400 RSGES--ASRALLVICNLAC-CSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSAR 456
Query: 337 ILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTK--ERAREILK 384
C F+ + E L+ ++K ++V V+ + ERARE K
Sbjct: 457 ENCVAALFALS----HESLRFKGLAKEARAVEVLKEVEERGTERAREKAK 502
Score = 47 (21.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 106 DAKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDE-ALSI 164
+A+ S S C+ L +++ +S R + + A A+E L + + G++ E A I
Sbjct: 448 EARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEV---EERGTERAREKAKKI 504
Query: 165 L 165
L
Sbjct: 505 L 505
Score = 43 (20.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 107 AKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGS 155
A +S T L +TL ++ NRS L GA+ L +++ ++ S
Sbjct: 359 AAESDRTRHDSALALYHLTL-NQTNRSKLVRLGAVPALFSMVRSGESAS 406
Score = 40 (19.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 290 ELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAV 335
E+ ++ +LL R RA ++ H A ++ ++ S +SD +V
Sbjct: 132 EIRVSEQELL-RAVAHRAPMIIHHADSELMGRRDFNNSTTSSDESV 176
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 141 (54.7 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 10 FLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNN----TCPVTKQVLQETDLTSTTP 65
F+CP++ ++M DPVT+ G T++R IE+W C+++ +CP+T Q L TD++++
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASI- 85
Query: 66 NHTLRRLIQAWCTIN 80
LR I+ W + N
Sbjct: 86 --ALRNTIEEWRSRN 98
Score = 62 (26.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 35/170 (20%), Positives = 74/170 (43%)
Query: 85 IERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFL 144
+ R+P P PPV+ I + +K C ++ + S R CL GA+E L
Sbjct: 624 LTRMPDP-PPVNYCG--SIFSCVRKPHVVNGLC--KIHQ-GICSLRETFCLVEGGAVEKL 677
Query: 145 ATIITKSDAGSDECD-EALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRS 203
++ + E ALS L + K + I + + + ++ VL+ + +
Sbjct: 678 VALLDHENVKVVEAALAALSSLLEDGLDVE--KGVKILDEADGIRHILNVLRENRTERLT 735
Query: 204 Y-AIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHHQFSQQASKAALK 252
A+ +++ I + D + ++ +Q +V+ ++ ++Q ++ ALK
Sbjct: 736 RRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALK 785
Score = 50 (22.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 33/167 (19%), Positives = 62/167 (37%)
Query: 250 ALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTERRVCELMLNVLDLLCRCAEGRAEL 309
AL + ++C R+ V T RV L L ++ + +
Sbjct: 122 ALMHVRQICRTIRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAI 181
Query: 310 LKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEM-----LQVGVVSK-- 362
+ G + + K + + AV +L + K A + + L VG+ S
Sbjct: 182 VAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNS 241
Query: 363 --LCLVLQVDASVKTKERAREILKLNARAWRDSPCVPAHLLSSYPSS 407
+ +V + D +++ ER+ EI++ A R P + LL P +
Sbjct: 242 ENVSIVEKADRTLENMERSEEIVRQMASYGRLQPLL-GKLLEGSPET 287
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 352 QEMLQVGVVSKL 363
QEML+VG K+
Sbjct: 528 QEMLEVGAFEKI 539
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
E+P F+CPI+ +LM+DP+ S G +Y++ +E W+ + K T P+T VL LT
Sbjct: 402 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWI-SRKKRTSPMTNLVLSSVILT--- 457
Query: 65 PNHTLRRLIQAW 76
PN TL+ I W
Sbjct: 458 PNRTLKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
E+P F+CPI+ +LM+DP+ S G +Y++ +E W+ + K T P+T VL LT
Sbjct: 403 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWI-SRKKRTSPMTNLVLSSVILT--- 458
Query: 65 PNHTLRRLIQAW 76
PN TL+ I W
Sbjct: 459 PNRTLKMAIDRW 470
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P H+ CPI ++M DP + G TY+R I+ W+ + PVTK L+ +DLT PN
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQK-HQDVSPVTKHRLKHSDLT---PN 764
Query: 67 HTLRRLIQAW 76
HTLR I+ W
Sbjct: 765 HTLRSAIREW 774
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+ P+H+ CPI ++M +P + G TY+R I WL K+N PVT+Q L LT
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLE--KHNISPVTRQKLDHFKLT-- 778
Query: 64 TPNHTLRRLIQAW 76
PNHTLR I+ W
Sbjct: 779 -PNHTLRSAIRDW 790
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 144 (55.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P FLCPI+ +LM+DPV S G +Y++ +E W+ + K T P+T +L LT P
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWI-SKKKRTSPMTNLILPSMVLT---P 459
Query: 66 NHTLRRLIQAW 76
N TL+ I W
Sbjct: 460 NRTLKMAISRW 470
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 144 (55.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F+CPI+ +LM+DPV S G +Y++ +E W+ + K T P+T VL LT P
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWI-SKKKRTSPMTNLVLPSAVLT---P 459
Query: 66 NHTLRRLIQAW 76
N TL+ I W
Sbjct: 460 NRTLKMAINRW 470
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/78 (39%), Positives = 43/78 (55%)
Query: 1 MEEIE--VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQET 58
ME + +P F+CPI+ +LM+DPV S G +Y+R +E W+ K T P+T L
Sbjct: 397 MESLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-KKRTSPMTNLALPSL 455
Query: 59 DLTSTTPNHTLRRLIQAW 76
LT PN TL+ I W
Sbjct: 456 VLT---PNRTLKMAINRW 470
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F+CPI+ +LM+DPV S G +Y+R +E W+ K T P+T L LT P
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-KKRTSPMTNLALPSLVLT---P 457
Query: 66 NHTLRRLIQAW 76
N TL+ I W
Sbjct: 458 NRTLKMAINRW 468
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
E E P +F+CPISL++M+DP + G TY+ I WL + T P+T L T L
Sbjct: 321 EHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWL-QGGHETSPMTNTKLHHTKLV 379
Query: 62 STTPNHTLRRLIQAW 76
PN LR IQ W
Sbjct: 380 ---PNLALRSAIQEW 391
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 138 (53.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P++F+CPIS ++MR+P + G TY+ ++ WL + T P+T L +L PN
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDN-GHETSPMTNLKLAHNNLV---PN 553
Query: 67 HTLRRLIQAWCTINA 81
H LR IQ W N+
Sbjct: 554 HALRSAIQEWLQRNS 568
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 10 FLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPNHTL 69
F CPIS+++MRDP + G TY+ +WL + T P T + L+ +L PNHTL
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRS-GGRTSPKTNKPLENHNLV---PNHTL 292
Query: 70 RRLIQAWCTIN 80
R +I+ W N
Sbjct: 293 RIIIKDWLEKN 303
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 70/293 (23%), Positives = 128/293 (43%)
Query: 94 PVDKTQIVKILNDAKKSPSTG--RKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKS 151
P D VK+ D +S S R +LR + NR + +GAI+ L ++ +
Sbjct: 178 PEDLQPTVKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCN 237
Query: 152 DAGSDECDEALSILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKS 211
D + E A++ L +L++ + K+++ G ++SL+ VLK G S+ A L S
Sbjct: 238 DPWTQE--HAVTALLNLSLHDQN-KAVIAAGGA--IKSLVWVLKTGTETSKQNAACALLS 292
Query: 212 IFEVADPFQLISVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXX 271
+ + + I +V++L + S + K AL L +LC +N+ +AV
Sbjct: 293 LALLEENKGSIGACGAI-PPLVSLLLNG---SCRGKKDALTTLYKLCTLQQNKERAV-TA 347
Query: 272 XXXXXXXXXXXXTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAAS 331
+ E + VL L +G+ +++ G G+A + + I S
Sbjct: 348 GAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAIVEEG-GIAALVEAIEDGSVKGK 406
Query: 332 DRAVRILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDA-SVKTKERAREIL 383
+ A+ L +C S R L +++ G + L + Q + SV+ K +A +L
Sbjct: 407 EFAILTLLQLCSDSVRNRGL--LVREGAIPPLVGLSQSGSVSVRAKRKAERLL 457
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 139 (54.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 29/70 (41%), Positives = 38/70 (54%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P+HF CP+ +M++P + G TYDR IE W+ + T PVT LQ +L PN
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMEN--HRTSPVTNSPLQNVNLL---PN 804
Query: 67 HTLRRLIQAW 76
HTL I W
Sbjct: 805 HTLYAAIVEW 814
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 133 (51.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 62/280 (22%), Positives = 125/280 (44%)
Query: 106 DAKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSIL 165
D+ S ++ +R ++ NR + AGAI+ L ++I+ SD E ++ +
Sbjct: 72 DSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEY--GVTAI 129
Query: 166 YHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVK 225
+L++ + +SI ++G ++ L+R LK G ++ A L + ++ + I +
Sbjct: 130 LNLSLCDENKESIA-SSGA--IKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIG-R 185
Query: 226 QEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTE 285
+VN+L + F +A K A L LC N+I+AV+
Sbjct: 186 SGAIPLLVNLL-ETGGF--RAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGS 242
Query: 286 RRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFS 345
V + V+ LL E + +++ G G+ V+ + + + + AV IL +C+ S
Sbjct: 243 NMVDKSAF-VMSLLMSVPESKPAIVEEG-GVPVLVEIVEVGTQRQKEMAVSILLQLCEES 300
Query: 346 ATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKL 385
R + + + G + L + Q S + K++A +++L
Sbjct: 301 VVYRTM--VAREGAIPPLVALSQAGTS-RAKQKAEALIEL 337
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 132 (51.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 61/280 (21%), Positives = 126/280 (45%)
Query: 106 DAKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSIL 165
++ S ++ +R ++ NR L AGAI+ L ++I+ SD E ++ +
Sbjct: 70 ESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEY--GVTAV 127
Query: 166 YHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVK 225
+L++ + K +++++G ++ L+ L+ G ++ A L + +V + I +
Sbjct: 128 LNLSLCDEN-KEMIVSSGA--VKPLVNALRLGTPTTKENAACALLRLSQVEENKITIG-R 183
Query: 226 QEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEXXXXXXXXXXXXXXTE 285
+VN+L ++ F +A K A L LC N+ +AVE E
Sbjct: 184 SGAIPLLVNLL-ENGGF--RAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDF-E 239
Query: 286 RRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFS 345
+ + V++LL E + +++ G G+ V+ + + + + +V IL +C+ S
Sbjct: 240 SDMVDKSAFVMNLLMSAPESKPAVVEEG-GVPVLVEIVEAGTQRQKEISVSILLQLCEES 298
Query: 346 ATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKL 385
R + + + G V L + Q AS K +A +++L
Sbjct: 299 VVYRTM--VAREGAVPPLVALSQGSASRGAKVKAEALIEL 336
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P+H+LCPI ++M+DP+ + G TY+ I WL ++T P+T +++ +L PN
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLAN-GHDTSPMTNLKMEDCNLI---PN 791
Query: 67 HTLRRLIQAW 76
H L IQ W
Sbjct: 792 HALHLAIQDW 801
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+ VP FLCPI+ +LM+DPV + G +Y++ +E W+ + ++ P+T L LT
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSS-PMTNLPLPSLVLT-- 458
Query: 64 TPNHTLRRLIQAW 76
PN TL+ I W
Sbjct: 459 -PNRTLKMAISRW 470
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P HF+CP+ +M +P + G TYDR IE WL ++NT P+T L +L PN
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLK--EHNTSPMTDSPLHSKNLL---PN 821
Query: 67 HTLRRLIQAW 76
+TL I W
Sbjct: 822 YTLYTAIMEW 831
>UNIPROTKB|Q6K762 [details] [associations]
symbol:PUB73 "U-box domain-containing protein 73"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 UniPathway:UPA00143 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208 EMBL:CM000139
GO:GO:0000151 EMBL:AP004864 EMBL:AK106789 RefSeq:NP_001046869.1
UniGene:Os.54797 ProteinModelPortal:Q6K762 PRIDE:Q6K762
EnsemblPlants:LOC_Os02g28870.1 GeneID:4329384
KEGG:dosa:Os02t0490000-01 KEGG:osa:4329384 Gramene:Q6K762
eggNOG:NOG240446 OMA:HLLRDMI ProtClustDB:CLSN2692738 Uniprot:Q6K762
Length = 586
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 54/219 (24%), Positives = 101/219 (46%)
Query: 14 ISLQLMRDPVTVSTGITYDRV---NIERWLFTCKNNTCPVTKQVLQETDLTSTTPNHTLR 70
+ ++MRDPV + +G + D+ N +R NT T L + + PNH LR
Sbjct: 191 LQAEVMRDPVILPSGYSVDQTYQNNQKRQ--NPWTNTSTFTDHSLP---YSLSVPNHLLR 245
Query: 71 RLIQAWCT----INACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRLRSITL 126
+I AWC ++ + TP P ++ QI +IL + ++ R+ L+ ++ +T
Sbjct: 246 DMISAWCLDHSDLSPSTTSDTPSTPLEPSEEEQIQRILKLFSGNSASQREALKLIQLLTK 305
Query: 127 QSERNRSCL-EAAGAIEFLATIITK--SDAGSDECDEALSILYHLNVSESYLKSIVINNG 183
++ + CL + A I L + K S D +E L+I+ +L + + + N
Sbjct: 306 TTKGVQPCLAKYADIIPVLINLRRKYKSSWTQDLEEERLTIILNLTMHRQNREILAGQN- 364
Query: 184 EEFLESLMRVLK-CGNYQSRSYAIMLLKSIFEVADPFQL 221
E ++ +++K GN R+ ++ + SI V F +
Sbjct: 365 -ELAGAIKKIVKKAGNRGKRTSSLAKVASIVAVLSEFDM 402
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 129 (50.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P +F+CPI ++M+DP + G TY+ I WL + +++T P+T L T L + N
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDS-EHDTSPMTNVKLSHTSLIA---N 819
Query: 67 HTLRRLIQAW 76
H LR IQ W
Sbjct: 820 HALRSAIQEW 829
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 125 (49.1 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 33/89 (37%), Positives = 44/89 (49%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
E+PA FLCPIS LM DP+ VS+G +Y+R + CK T T D ++
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACV----IACK--TLGFTPT--PPPDFSTVI 108
Query: 65 PNHTLRRLIQAWCTINACHGIERIPTPQP 93
PN L+ I +WC C P P+P
Sbjct: 109 PNLALKSAIHSWCE-RRC-----FPPPKP 131
Score = 44 (20.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 23/127 (18%), Positives = 55/127 (43%)
Query: 129 ERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVINNGEEFLE 188
+ NR L GA++ L +++ L IL ++ +++ + G E +
Sbjct: 383 QSNRGKLVKLGAVQMLLGMVSLGQM----IGRVLLILCNMASCPVSRPALLDSGGVECMV 438
Query: 189 SLMRVLKCGNYQSRSYAIMLLKSIFEVAD-PFQLISVKQEFFTEIVNVLRDHHQFSQQAS 247
++R + N +R + +L + F+ +++ E+V V R + ++Q +
Sbjct: 439 GVLRRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKA 498
Query: 248 KAALKLL 254
+ L++L
Sbjct: 499 RRVLEVL 505
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 124 (48.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 28/72 (38%), Positives = 37/72 (51%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
E P +F+CPI+ +M DP + G TY+ I RW F + T P+ + L T L
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRW-FERGHETSPMINKRLPHTSLV--- 407
Query: 65 PNHTLRRLIQAW 76
PN LR IQ W
Sbjct: 408 PNLALRSAIQEW 419
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
VPA F+CPIS+++M+DP S G TY+ I W F + P+T L +L P
Sbjct: 435 VPAAFICPISMEIMKDPQVASDGFTYEAEAIRCW-FDRGISRSPMTNLALPNLNLV---P 490
Query: 66 NHTLRRLIQAW 76
N LR I +
Sbjct: 491 NRVLRSFIHGY 501
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P HF CPI+ +M +P S G TY++ I+ WL KN+ P+T L PN
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQ--KNHKSPMTDLPFPSDSLL---PN 780
Query: 67 HTLRRLIQAW 76
H+L I+ W
Sbjct: 781 HSLLSAIKEW 790
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 407 393 0.00095 117 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 614 (65 KB)
Total size of DFA: 239 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.37u 0.09s 34.46t Elapsed: 00:00:01
Total cpu time: 34.38u 0.09s 34.47t Elapsed: 00:00:01
Start: Mon May 20 18:00:15 2013 End: Mon May 20 18:00:16 2013