BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040073
(407 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/408 (56%), Positives = 310/408 (75%), Gaps = 9/408 (2%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
EEIE+P FLCPISL++M+DPV VSTGITYDR +IE+WLF K N+CPVTKQ + + DLT
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 62 STTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRL 121
PNHTLRRLIQ+WCT+NA +G+ERIPTP+PP+ K++I K++ D+ S KCL+RL
Sbjct: 68 ---PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRL 124
Query: 122 RSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVIN 181
R I ++ N+ CLEAAG EFLA I++ DEAL++LYHL SE+ LK+++ N
Sbjct: 125 RQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNN 184
Query: 182 NGEE-FLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHH 240
+ ++SL ++++ G Y+SR YA +LLK+I EVADP Q +++K E FTE+V +L D
Sbjct: 185 KKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDD-- 242
Query: 241 QFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLD---VTERRVCELMLNVLD 297
+ SQ+A+KAA+ +LV +CPWGRNR KAVE G +SV+++LL+D +ERR E+ + VLD
Sbjct: 243 RISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLD 302
Query: 298 LLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQV 357
LLC+CAEGRAE L HGA +AVV KKILRVS ASDRAVR+L SV +F AT +L EMLQ+
Sbjct: 303 LLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQL 362
Query: 358 GVVSKLCLVLQVDASVKTKERAREILKLNARAWRDSPCVPAHLLSSYP 405
GVV+KLCLVLQV KTKE+A+E+LKL+AR W+DSPC+P +++ +YP
Sbjct: 363 GVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAYP 410
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/438 (53%), Positives = 317/438 (72%), Gaps = 38/438 (8%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
+EIE+P+ FLCPISL +M+DPV VSTGITYDR +IE+WLF+ K N+CPVTKQV+ ETDLT
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 62 STTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGRKCLRRL 121
PNHTLRRLIQ+WCT+NA +GIERIPTP+PP+ K++I K++ ++ S KCL+RL
Sbjct: 63 ---PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRL 119
Query: 122 RSITLQSERNRSCLEAAGAIEFLATIITKS-----------------------------D 152
R I ++ N+ CLEAA EFLA I++ S D
Sbjct: 120 RQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFD 179
Query: 153 AGSDECDEALSILYHLNVSESYLKSIVINN-GEEFLESLMRVLKCGNYQSRSYAIMLLKS 211
+ DEALS+LYHL+ SE+ LKS++ N G +++L ++++ G Y+SR+YA +LLK
Sbjct: 180 SSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKK 239
Query: 212 IFEVADPFQLISVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGG 271
+ EVADP Q+I +++E F E++ +L H Q S +A+++A+++LV CPWGRNR KAVEGG
Sbjct: 240 LLEVADPMQIILLERELFGEVIQIL--HDQISHKATRSAMQILVITCPWGRNRHKAVEGG 297
Query: 272 GVSVLVDLLLDVT---ERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSH 328
+S++++LL+D T ERR E+ + VLD+LC+CAEGRAE L HGA +AVVSKKILRVS
Sbjct: 298 TISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQ 357
Query: 329 AASDRAVRILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNAR 388
S+RAVR+L SV +F AT +LQEMLQ+GVV+KLCLVLQV KTKE+A+E+LKL+AR
Sbjct: 358 ITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHAR 417
Query: 389 AWRDSPCVPAHLLSSYPS 406
WR+SPCVP +L SYP+
Sbjct: 418 VWRESPCVPRNLYDSYPA 435
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 249/445 (55%), Gaps = 50/445 (11%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQ-ETDL 60
EEIE+P +F+CPISL++M+DPVT +GITYDR NI +WL K +CPVTKQ L ++DL
Sbjct: 6 EEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLE--KVPSCPVTKQPLPLDSDL 63
Query: 61 TSTTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKK--SPSTGRK-C 117
T PNH LRRLIQ WC N G+ RI TP+ P K +V+ + + KK + GR+
Sbjct: 64 T---PNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREET 120
Query: 118 LRRLRSITLQSERNR---SCLEAAGAIEFLATIITKSDAGSDEC---DEALSILYHLNVS 171
L++L + + R C I F+ ++ + G DE+L +L+ + +
Sbjct: 121 LQKLEVLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIP 180
Query: 172 ESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTE 231
+ K+I++ N + +ESL VL ++ S++Y I+LL+++ E + + E F
Sbjct: 181 SNDAKTILMEN-DRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIFKG 239
Query: 232 IVNVLRD---------------------------------HHQFSQQASKAALKLLVELC 258
I+ L+D H +QA AAL +L+E
Sbjct: 240 IIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLETS 299
Query: 259 PWGRNRIKAVEGGGVSVLVDLLLDVT-ERRVCELMLNVLDLLCRCAEGRAELLKHGAGLA 317
W RNR V+ G VS L++L + T E+R+ ELML VL LC CA GRAE+L H G+A
Sbjct: 300 SWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGGIA 359
Query: 318 VVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKE 377
VV+K++LRVS AA DRA+ IL +V KFS V++EM+ VG V KLC VL +D + KE
Sbjct: 360 VVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNLKE 419
Query: 378 RAREILKLNARAWRDSPCVPAHLLS 402
+A+EILK + W+ PC+ LL+
Sbjct: 420 KAKEILKDHFDEWKKFPCIDITLLT 444
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 205 bits (521), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 217/398 (54%), Gaps = 16/398 (4%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I++P HF CPISL+LM+DPVTV TG TYDR +IE W+ N TCPVT+ L + L
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL--- 68
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG------RKC 117
PNHTLRRLIQ WC N +G+ERIPTP+ P D T + +L+ A T
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128
Query: 118 LRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
LRRLR S++NR + A A E L I+ S+ E+L++L L ++E +
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPN-QF 187
Query: 178 IVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSI---FEVADPFQLISVKQEFFTEIVN 234
+ I++ +E L R+L + ++R A L++ + + AD IS + F +++
Sbjct: 188 VSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLD 247
Query: 235 VLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLN 294
+LR+ S++A K +K L LC R A+ G +L+D L +R E L
Sbjct: 248 LLRNPIS-SRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALA 306
Query: 295 VLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEM 354
++LLCR EG A +H + ++ K ILRVS A++ A L ++C +A R +E
Sbjct: 307 TVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC--TAEERWREEA 364
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRD 392
GVV +L L++Q + + + K++A+++LKL +W D
Sbjct: 365 AGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPD 402
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 184 bits (467), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 206/408 (50%), Gaps = 26/408 (6%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I++P HF CPISL LM DPVT+STG TYDR +I+ W+ N TCPVT+ L + L
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWI-AMGNTTCPVTRVALSDFTL--- 67
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG------RKC 117
PNHTLRRLIQ WC N +G+ERIPTP+ P D + +L+ A T
Sbjct: 68 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAA 127
Query: 118 LRRLRSITLQSERNRSCLEAAGAIEFLATII------TKSDAGSDECDEALSILYHLNVS 171
+RRLR + SE+NR + A E L I+ T + AL +L H+ +
Sbjct: 128 IRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTET 187
Query: 172 ESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQL---ISVKQEF 228
E + + + + R+L + + R A L++ + A L IS
Sbjct: 188 ECE----AVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSI 243
Query: 229 FTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRV 288
F ++++L++ S++A K +K + LC + R A+ G +L+D L +R
Sbjct: 244 FEGVLDLLKNPIS-SRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCD 302
Query: 289 CELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATA 348
E L ++LLCR EG A +H + ++ K ILRVS A++ A L ++C +A
Sbjct: 303 TERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC--TAEE 360
Query: 349 RVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDSPCV 396
R E G+V++L L++Q D + + K +A+ +LKL +W D V
Sbjct: 361 RCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 211/427 (49%), Gaps = 57/427 (13%)
Query: 3 EIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTS 62
EI +P+ F CPIS +LM+DPV +++GITYDR NIE+W F TCPVT VL +
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKW-FESGYQTCPVTNTVLTSLE--- 85
Query: 63 TTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGR--KCLRR 120
PNHT+RR+IQ WC + GIERIPTP+ PV Q+ +I + G C+
Sbjct: 86 QIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEM 145
Query: 121 LRSITL---QSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
+ +T +SERNR C++ GA L DA S+ + +L + ++V +++
Sbjct: 146 VTKMTRLGKESERNRKCVKENGAGLVLCVCF---DAFSENANASLLLEETVSVL-TWMLP 201
Query: 178 IVINNGEEF-----LESLMRVLKCGNYQSRSYAIMLLKSIFEV----ADPFQLISVKQEF 228
I + + L+ +L+ G+ A L+K + E+ I+ QE
Sbjct: 202 IGLEGQSKLTTTSSFNRLVELLRNGDQN----AAFLIKELLELNVTHVHALTKINGVQEA 257
Query: 229 FTEIVN--------VLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLL 280
F + +N ++ HH + L ++L V++ V++L
Sbjct: 258 FMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDL---------------VNITVEML 302
Query: 281 LDVTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCS 340
+D +E VCE L VL+++C EGR ++ ++ + ++ KKIL++S V ++
Sbjct: 303 VD-SENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWK 359
Query: 341 VCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDSPCVPAHL 400
VCK S ++E L++G KL ++LQV TKE+ E+LK+ + + + V
Sbjct: 360 VCK-SGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNGFVD--- 415
Query: 401 LSSYPSS 407
SY SS
Sbjct: 416 -RSYSSS 421
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 198/411 (48%), Gaps = 56/411 (13%)
Query: 3 EIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTS 62
EI +P F CPIS+ LM+DPV +STGITYDRV+IE W+ N TCPVT VL D
Sbjct: 28 EITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWI-NSGNKTCPVTNTVLTTFD--- 83
Query: 63 TTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG--RKC--- 117
PNHT+R++IQ WC I+RIPTP+ P+ ++ +I + G KC
Sbjct: 84 QIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVI 143
Query: 118 LRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
+ +++ + +SE+NR C+ L K DE L+ + + +S L +
Sbjct: 144 IEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSG-----DEKLTFMLNEILS---LLT 195
Query: 178 IVINNGEEFLESLMR---------VLKCGNYQSRSYAIMLLKSIFEVADP-FQLISVKQE 227
+ G E + L +LK + R A ++K I + + +V+
Sbjct: 196 WMFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENG 255
Query: 228 FFTEIVNVLRDH-------------HQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVS 274
+V ++RD +Q Q + A + L E G VS
Sbjct: 256 VAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFL--------------EIGLVS 301
Query: 275 VLVDLLLDVTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRA 334
+ V++++D E VCE L VLD +C GR E+ K+ + ++ KKI +VS A+ +
Sbjct: 302 ITVEMIVD-AENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSS 360
Query: 335 VRILCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKL 385
+ ++ + K T V ++ +++G K+ LVLQV +TKE+A E+LK+
Sbjct: 361 MSMILKLWKTGNTVAV-EDAVRLGAFQKVLLVLQVGYGEETKEKATELLKM 410
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 202/403 (50%), Gaps = 38/403 (9%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
VP F CPISL +M+ PV++STG+TYDRV+I+RWL NNTCP T Q+LQ + P
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWL-DDGNNTCPATMQILQNKEF---VP 66
Query: 66 NHTLRRLIQAWC-TINACHGIERIPTPQPPVDKTQI----VKILNDAKKSPSTGRKCLRR 120
N TL RLI W +IN E + P D+ +I NDA+ K LR
Sbjct: 67 NLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARS------KILRF 120
Query: 121 LRSITLQSERNRSCLEAAGAIEFLAT---IITKSDAGSD-------ECDEALSILYHLNV 170
R +S+ NR L AG +F+A +I+ S SD E + LS++
Sbjct: 121 AR----ESDENREFL--AGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIF 174
Query: 171 SESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFT 230
L ++++ NG + L S ++K GN + + +L+ I A+ +I+ + T
Sbjct: 175 DRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVT 234
Query: 231 EIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLD-VTERRVC 289
EI+ ++ +A L LL+ + R ++ + V+ L LL D T V
Sbjct: 235 EIIKLI--SSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVT 292
Query: 290 ELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATAR 349
E L +L+ + C EGR+E+ G + V K+++VS AA++ AV +L SVC +
Sbjct: 293 EKCLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKK 351
Query: 350 VLQEMLQVGVVSKLCLVLQVDASVKTKERAREIL---KLNARA 389
++++ V+K+ L+LQ + S+ + ++L K+N+R+
Sbjct: 352 AQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRS 394
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 204/393 (51%), Gaps = 32/393 (8%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
+++ +P FLCP+SL+LM+DPV V+TG TY+R I+RW+ C N TCP T+Q L+ L
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWI-DCGNLTCPKTQQKLENFTL- 294
Query: 62 STTPNHTLRRLIQAWCTINACHGIER----IPTPQPPVDKTQIVKILNDAKKSPSTG--R 115
TPN+ LR LI WC A H IE+ I +++ L S ST R
Sbjct: 295 --TPNYVLRSLISRWC---AEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRR 349
Query: 116 KCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL 175
+ +RS++ +S NR + AGAI L ++T D + E A++ + +L++ E+
Sbjct: 350 NAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQE--NAITCVLNLSIYENN- 406
Query: 176 KSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
K +++ G + S+++VL+ G ++R A L S+ +AD ++I +V++
Sbjct: 407 KELIMFAGA--VTSIVQVLRAGTMEARENAAATLFSL-SLADENKIIIGGSGAIPALVDL 463
Query: 236 LRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNV 295
L + + + K A L LC + N+ +AV G V+ LV +L D T R+ + L +
Sbjct: 464 LENG---TPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTI 520
Query: 296 LDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAAS-DRAVRILCSVCKFSATARVLQEM 354
L +L + ++ ++K A++ IL+ + + A IL S+CK R +++
Sbjct: 521 LSVLANNQDAKSAIVKANTLPALIG--ILQTDQTRNRENAAAILLSLCK-----RDTEKL 573
Query: 355 LQVGVVSKLC--LVLQVDASVKTKERAREILKL 385
+ +G + + + L + + + K +A +L+L
Sbjct: 574 ITIGRLGAVVPLMDLSKNGTERGKRKAISLLEL 606
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 204/415 (49%), Gaps = 28/415 (6%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I VP+ F CPISL +MR PV++ TG+TYDR +I+RWL NNTCP T Q+L+ D
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQLLKTKDF--- 65
Query: 64 TPNHTLRRLIQAWC-TINACHGIERIPTPQPP----VDKTQIVKILNDAKKSPSTGRKCL 118
PN TL+RLI W +I H + P PP V + V +L + S K +
Sbjct: 66 VPNLTLQRLINIWSDSIGRRHNGDS-PVLNPPSGREVPTKEEVNVLLERLMSLENLMKIV 124
Query: 119 RRLRSITLQSERNRSCLEAAGAIEF---LATIITKSDAGSDECDEALSILYHLNVSESYL 175
R ++ S+ NR L + +EF L II + A+ IL + V L
Sbjct: 125 RFVK----DSDSNREFL--SKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERL 178
Query: 176 KSIVI-NNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVN 234
++++ N+G + L +++ ++ GN +S+ ++ +L I A +I+ + TE++
Sbjct: 179 SNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMK 238
Query: 235 VLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLL--DVTERRVCELM 292
+ +A+L L+ + R R K + ++ + D+LL +T V E
Sbjct: 239 SISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKS 298
Query: 293 LNVLDLLCRCAEGRAELLKHGAGLAV--VSKKILRVSHAASDRAVRILCSVCKFSATARV 350
L +L+ L EGR E+ G V V KK+L+VS A++ AV IL +C +
Sbjct: 299 LKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKT 358
Query: 351 LQEMLQ-VGVVSKLCLVLQVDASVKTKERARE---ILKLNARAWRDSPCVPAHLL 401
++E ++ V+KL +V+Q + S ++ A++ +LK N+ A H++
Sbjct: 359 VEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSALAAYETKTTHIM 413
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 201/420 (47%), Gaps = 41/420 (9%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I VP F CPISL +M+ PV++ TG+TYDR +I+RWL NNTCP T Q+LQ D
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQILQNKDF--- 63
Query: 64 TPNHTLRRLIQAWC-TINACHGIER----IPTPQPPVDKTQIVKILNDAKKSPSTGRKCL 118
PN TL+RLI+ W ++ +E PT D VKI +K R+ L
Sbjct: 64 IPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKI----EKEERDDREVL 119
Query: 119 RRLRSITLQSERNRSCLEAAGAIEFLATII---------TKSDAGSDECDEALSILYHLN 169
++ +S+ NR L AG +F+ ++ T S A S EA+ IL +
Sbjct: 120 SKIVRFGRESDDNRGFL--AGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIR 177
Query: 170 VSES---YLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQ 226
S ++++ NG + L ++ + K GN + + LL+ I A+ LI+ +
Sbjct: 178 SKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERD 237
Query: 227 EFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEG---GGVSVLVDLLLDV 283
TE++ + S S +L L+ + R ++ + G V+ L+
Sbjct: 238 GLITELMKSISKDSDLSLIES--SLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSS 295
Query: 284 TERRVCELMLNVLDLLCRCAEGRAELL-KHGAGLAVVSKKILRVSHAASDRAVRILCSVC 342
V E L +L++L EGR+E+ G L V KK+++VS AA++ AV +L SV
Sbjct: 296 LSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVS 355
Query: 343 KFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREIL---KLNARAWRDSPCVPAH 399
+ L+ + V V+K+ L+LQ + S + ++L K+N+R+ C+ A+
Sbjct: 356 YLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNSRS-----CLSAY 410
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 200/405 (49%), Gaps = 47/405 (11%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
+ + +P FLCPISL+LM+DP VSTG TY+R I+RW+ C N +CP T+Q L+ L
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DCGNLSCPKTQQKLENFTL- 296
Query: 62 STTPNHTLRRLIQAWCTINACHGIERIPTPQP------------------PVDKTQIVKI 103
TPN+ LR LI WCT H IE QP D + I +
Sbjct: 297 --TPNYVLRSLISQWCT---KHNIE-----QPGGYMNGRTKNSDGSFRDLSGDMSAIRAL 346
Query: 104 L-NDAKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEAL 162
+ + +S R + +RS++ +S NR + AGAI L ++T SD ++ + A+
Sbjct: 347 VCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLT-SDGDTETQENAV 405
Query: 163 SILYHLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLI 222
+ + +L++ E + K +++ G + S++ VL+ G+ ++R A L S+ +AD ++I
Sbjct: 406 TCILNLSIYE-HNKELIMLAGA--VTSIVLVLRAGSMEARENAAATLFSL-SLADENKII 461
Query: 223 SVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLD 282
+V++L S + K A L LC + N+ +AV G V LV +L D
Sbjct: 462 IGASGAIMALVDLL---QYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTD 518
Query: 283 VTERRVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVC 342
+ R+ + L +L +L + +L+ A + + + + + A IL +C
Sbjct: 519 SSSERMADEALTILSVLASNQVAKTAILRANA-IPPLIDCLQKDQPRNRENAAAILLCLC 577
Query: 343 KFSATARVLQEMLQVGVVSKLCLVLQV--DASVKTKERAREILKL 385
K R ++++ +G + + ++++ D + + K +A +L+L
Sbjct: 578 K-----RDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLEL 617
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 28/312 (8%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F CPISL+LM+DPV VS+G TY+R I++WL + + TCP T+Q L T L TP
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDS-GHKTCPKTQQPLSHTSL---TP 283
Query: 66 NHTLRRLIQAWCTINACHGIERIPTPQPPVDK----------TQIVKILNDAKK-SPSTG 114
N L+ LI WC N GIE Q DK +V ++N + +
Sbjct: 284 NFVLKSLISQWCEAN---GIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQ 340
Query: 115 RKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESY 174
R +R + ++ NR C+ AGAI L +++ SD + E A++ L +L++ E+
Sbjct: 341 RAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQE--HAVTALLNLSIHENN 398
Query: 175 LKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVN 234
SIV ++ + ++ VLK G+ ++R A L S+ V D ++ ++N
Sbjct: 399 KASIVDSHA---IPKIVEVLKTGSMETRENAAATLFSL-SVVDENKVTIGAAGAIPPLIN 454
Query: 235 VLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLN 294
+L D S + K A + LC + N+++AV+ G V L++ L+D T + E L+
Sbjct: 455 LLCD---GSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDE-ALS 510
Query: 295 VLDLLCRCAEGR 306
+L +L EG+
Sbjct: 511 LLSILAGNPEGK 522
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 24/393 (6%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
++P+ F+CPISL+ M+DPVT+ TG TY+R+NI +W F + TCP T Q L + + T
Sbjct: 63 DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKW-FNLGHLTCPTTMQELWD---DTVT 118
Query: 65 PNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGR-KCLRRLRS 123
PN TL LI W + +R Q + ++IL KK+ R L L+
Sbjct: 119 PNKTLHHLIYTWFSQKYVLMKKRSEDVQ-----GRAIEILGTLKKAKGQARVHALSELKQ 173
Query: 124 ITLQSERNRSCLEAAGAIEFLATII---TKSDAGSDECDEALSILYHLNVSESYLKSIVI 180
I + R + G + +++++ T GS E ++IL L++ +S KS ++
Sbjct: 174 IVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGS----EVVAILVSLDL-DSDSKSGLM 228
Query: 181 NNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHH 240
+ L ++ +L G+ +++ L++ + E + ++ +++D
Sbjct: 229 QPAKVSL--IVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKR 286
Query: 241 QFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNVLDLLC 300
+ AL+LL + + R V G V LVD+L + + EL L VLD LC
Sbjct: 287 H--RNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSL-DPECLELALFVLDALC 343
Query: 301 RCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQVGVV 360
EGR + + + ++RVS ++ A+ IL SVCK A ++VG+
Sbjct: 344 TDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKL-APEECSPLAVEVGLA 402
Query: 361 SKLCLVLQVDASVKTKERAREILKLNARAWRDS 393
+KL LV+Q K+R+ E+LKL + + D+
Sbjct: 403 AKLLLVIQSGCDAALKQRSAELLKLCSLHYSDT 435
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 165/314 (52%), Gaps = 23/314 (7%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I +P F CPISL+LM+DPV VSTG TY+R IE+W+ + ++TCP T+Q + + L
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIAS-GHHTCPTTQQKMSTSAL--- 326
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPV------DKTQIVKILNDAKKSPST--GR 115
TPN+ LR LI WC N +R P P ++ I +L+ SP T R
Sbjct: 327 TPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKL-CSPDTEEQR 385
Query: 116 KCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL 175
LR + ++ NR C+ AGAI L ++++ SD + E A++ L +L++ E
Sbjct: 386 SAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQE--HAVTALLNLSIHEDN- 442
Query: 176 KSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
K+ +I++G + S++ VLK G+ ++R A L S+ V D +++ +V +
Sbjct: 443 KASIISSGA--VPSIVHVLKNGSMEARENAAATLFSL-SVIDEYKVTIGGMGAIPALVVL 499
Query: 236 LRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNV 295
L + SQ+ K A L LC + N+ +A+ G V +++ L+ + T + E M +
Sbjct: 500 L---GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMA-I 555
Query: 296 LDLLCRCAEGRAEL 309
L +L EG+A +
Sbjct: 556 LSILSSHPEGKAAI 569
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 165/314 (52%), Gaps = 23/314 (7%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I +P F CPISL+LM+DPV VSTG TY+R IE+W+ + ++TCP T+Q + + L
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIAS-GHHTCPTTQQKMSTSAL--- 326
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPV------DKTQIVKILNDAKKSPST--GR 115
TPN+ LR LI WC N +R P P ++ I +L+ SP T R
Sbjct: 327 TPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKL-CSPDTEEQR 385
Query: 116 KCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL 175
LR + ++ NR C+ AGAI L ++++ SD + E A++ L +L++ E
Sbjct: 386 SAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQE--HAVTALLNLSIHEDN- 442
Query: 176 KSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
K+ +I++G + S++ VLK G+ ++R A L S+ V D +++ +V +
Sbjct: 443 KASIISSGA--VPSIVHVLKNGSMEARENAAATLFSL-SVIDEYKVTIGGMGAIPALVVL 499
Query: 236 LRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNV 295
L + SQ+ K A L LC + N+ +A+ G V +++ L+ + T + E M +
Sbjct: 500 L---GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMA-I 555
Query: 296 LDLLCRCAEGRAEL 309
L +L EG+A +
Sbjct: 556 LSILSSHPEGKAAI 569
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 39/382 (10%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P +F CPISL+LM+DPV VSTG TY+R +I++WL + TCP +++ L L TP
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLLHAGL---TP 303
Query: 66 NHTLRRLIQAWCTIN---------ACHGIERIPTPQPPVDKTQIVKILND-AKKSPSTGR 115
N+ L+ LI WC N +C + + D+T ++ +L A + R
Sbjct: 304 NYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQR 363
Query: 116 KCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYL 175
LR + ++ NR C+ AGAI L +++ D + E +++ L +L+++E
Sbjct: 364 AAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQE--HSVTALLNLSINEGN- 420
Query: 176 KSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
K +++ G + ++ VLK G+ ++R A L S+ V D ++ ++++
Sbjct: 421 KGAIVDAGA--ITDIVEVLKNGSMEARENAAATLFSL-SVIDENKVAIGAAGAIQALISL 477
Query: 236 LRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNV 295
L + +++ K A + LC + N+ +AV+GG V L LL D V E L +
Sbjct: 478 L---EEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDE-ALAI 533
Query: 296 LDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEML 355
L +L EG+ + + V+ + I S + A IL +C
Sbjct: 534 LAILSTNQEGKT-AIAEAESIPVLVEIIRTGSPRNRENAAAILWYLC------------- 579
Query: 356 QVGVVSKLCLVLQVDASVKTKE 377
+G + +L + +V A V KE
Sbjct: 580 -IGNIERLNVAREVGADVALKE 600
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 194/400 (48%), Gaps = 43/400 (10%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F CPISL++MRDPV VS+G TY+R IE+W+ ++TCP T+Q L T L TP
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWI-EGGHSTCPKTQQALTSTTL---TP 311
Query: 66 NHTLRRLIQAWCTINACHGIERIPTPQP--------------PVDKTQIVKIL-NDAKKS 110
N+ LR LI WC N I P+P P + +I ++ A +
Sbjct: 312 NYVLRSLIAQWCEAN------DIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGN 365
Query: 111 PSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNV 170
P R +R + ++ NR + AGAI L +++ D+ E +++ L +L++
Sbjct: 366 PEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQE--HSVTALLNLSI 423
Query: 171 SESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFT 230
E+ K +++ G + +++VLK G+ ++R A L S+ V D ++
Sbjct: 424 CENN-KGAIVSAG--AIPGIVQVLKKGSMEARENAAATLFSL-SVIDENKVTIGALGAIP 479
Query: 231 EIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCE 290
+V +L ++ +Q+ K A L LC + N+ KA+ G + L LL + V E
Sbjct: 480 PLVVLL---NEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDE 536
Query: 291 LMLNVLDLLCRCAEGRAELLKHGAGLAVVS--KKILRVSHAASDRAVRILCSVCKFSATA 348
L +L +L EG+A + G+ AV S + I S + A +L +C S
Sbjct: 537 -ALAILAILSSHPEGKAII---GSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC--SGDP 590
Query: 349 RVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNAR 388
+ L E ++G++ L + L + + + K +A ++L+ +R
Sbjct: 591 QHLVEAQKLGLMGPL-IDLAGNGTDRGKRKAAQLLERISR 629
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 193/399 (48%), Gaps = 28/399 (7%)
Query: 1 MEEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDL 60
+E E+P+ F+CPISL+ M+DPVT+ TG TY+R NI +W F + TCP T Q L + DL
Sbjct: 55 LELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKW-FNIGHCTCPTTMQELWD-DL 112
Query: 61 TSTTPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGR-KCLR 119
TPN TL +LI W + +R Q + ++IL +K+ + L
Sbjct: 113 --VTPNKTLHQLIYTWFSQKYVLMKKRSEDVQ-----GRAIEILGTLRKAKGKAKVHALS 165
Query: 120 RLRSITLQSERNRSCLEAAGAIEFLATII---TKSDAGSDECDEALSILYHLNVSESYLK 176
L+ + + + + G + +++++ T GS EA++IL +L + +S K
Sbjct: 166 ELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGS----EAIAILVNLEL-DSDSK 220
Query: 177 SIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVL 236
+ ++ L ++ +L G+ +++ L+ + E + ++ ++
Sbjct: 221 AGLMQPARVSL--MVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLV 278
Query: 237 RDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLL--LDVTERRVCELMLN 294
+D + + AL LL + + R V G V LVD+L LDV E L
Sbjct: 279 KDRRR--RNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDV---ECLESALF 333
Query: 295 VLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEM 354
VLD LC +EGR L + + +++VS ++ A+ IL SVCK A+
Sbjct: 334 VLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKL-ASEECSSLA 392
Query: 355 LQVGVVSKLCLVLQVDASVKTKERAREILKLNARAWRDS 393
++VG+ +KL LV+Q K+R+ E+LKL + + DS
Sbjct: 393 VEVGLAAKLLLVIQSGCDPALKQRSAELLKLCSLHYSDS 431
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 37/329 (11%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P F CPISL+LM DPV VS+G TY+R I++WL + TCP T++ L +D+ TPN
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWL-EGGHLTCPKTQETLT-SDI--MTPN 312
Query: 67 HTLRRLIQAWCTINACHGIERIPTPQPPV---------------DKTQIVK--ILNDAKK 109
+ LR LI WC N GIE P +P + D+ ++ +L +
Sbjct: 313 YVLRSLIAQWCESN---GIE--PPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQ 367
Query: 110 SPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLN 169
P R +R + Q+ NR + A+GAI L ++T S+ S + A++ + +L+
Sbjct: 368 QPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISN-DSRTQEHAVTSILNLS 426
Query: 170 VSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFF 229
+ + IV ++G + ++ VL+ G+ ++R A L S+ V D ++
Sbjct: 427 ICQENKGKIVYSSGA--VPGIVHVLQKGSMEARENAAATLFSL-SVIDENKVTIGAAGAI 483
Query: 230 TEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVC 289
+V +L + SQ+ K A L LC + N+ KAV G V VL+ LL + E +
Sbjct: 484 PPLVTLL---SEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTE-PESGMV 539
Query: 290 ELMLNVLDLLCRCAEGRAELLKHGAGLAV 318
+ L++L +L +G++E+ GA AV
Sbjct: 540 DESLSILAILSSHPDGKSEV---GAADAV 565
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P FLCPI+L++M DPV ++TG TY++ +I++W F + TCP T+ QE D S P
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKW-FDAGHKTCPKTR---QELDHLSLAP 345
Query: 66 NHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSP--STGRKCLRRLRS 123
N L+ LI WC N E+ +P ++ V +L +A S R+ ++++R
Sbjct: 346 NFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRL 405
Query: 124 ITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKSIVINNG 183
+ ++ NR + AGAI L +++ D+G E A++ L +L++ E K ++ N G
Sbjct: 406 LARENPENRVLIANAGAIPLLVQLLSYPDSGIQE--NAVTTLLNLSIDEVN-KKLISNEG 462
Query: 184 EEFLESLMRVLKCGNYQSRSYAIMLLKSI 212
+ +++ +L+ GN ++R + L S+
Sbjct: 463 A--IPNIIEILENGNREARENSAAALFSL 489
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 192/402 (47%), Gaps = 34/402 (8%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I VP F+CPISL LM DPV +STG TYDR +I RW+ + TCP T Q+L ++ +
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWI-EEGHCTCPKTGQMLMDSRI--- 358
Query: 64 TPNHTLRRLIQAWCTINA-CHGIERIPTP----------QPPVDKTQ-----IVKILNDA 107
PN L+ LI WCT + + E +P + V+ + ++K L D
Sbjct: 359 VPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADG 418
Query: 108 KKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYH 167
++ T R +R + + NR+ + AGAI L ++T +A + E +++ + +
Sbjct: 419 SQAAQT--VAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQE--NSVTAMLN 474
Query: 168 LNVSESYLKSIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQ 226
L++ E KS ++ G + LES++ VL G +++ A L S+ V + + I++
Sbjct: 475 LSIYEKN-KSRIMEEG-DCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVD 532
Query: 227 EFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTER 286
+ + +L++ + + K A+ L L N + +EGGGVS LV L +
Sbjct: 533 QCVEALALLLQNG---TPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN---E 586
Query: 287 RVCELMLNVLDLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSA 346
V E L LL R + G + K + +A + + + + AV L +C+ S
Sbjct: 587 GVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCR-SG 645
Query: 347 TARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNAR 388
A V +++L+ ++ L L + + + +A + ++ R
Sbjct: 646 GAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQR 687
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 176/384 (45%), Gaps = 34/384 (8%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
++P F CPISL++M DPV + +G T+DRV+I++W+ + N TCP+TK L ET
Sbjct: 3 FDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDS-GNRTCPITKLPLSETPY--L 59
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQ---IVKILNDAKKSPSTGRKCLRR 120
PNH LR LI + ++ P Q +Q ++ L S ++ + L R
Sbjct: 60 IPNHALRSLILNFAHVSLKESSR--PRTQQEHSHSQSQALISTLVSQSSSNASKLESLTR 117
Query: 121 LRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALS----ILYHLNVSESYLK 176
L +T + R + +GA+ + D C++ L L E K
Sbjct: 118 LVRLTKRDSSIRRKVTESGAVRAALDCV-------DSCNQVLQEKSLSLLLNLSLEDDNK 170
Query: 177 SIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVL 236
++ +G + ++ VL+ G+ ++ A LL S+ V I + + +V++L
Sbjct: 171 VGLVADG--VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLL 228
Query: 237 RDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNVL 296
R + ++ S A L LC + NR + V+ G V +LV+ ER V VL
Sbjct: 229 RVGNDRERKESATA---LYALCSFPDNRKRVVDCGSVPILVEAADSGLERAV-----EVL 280
Query: 297 DLLCRCAEGRAELLKHGAGLAVVSKKILRVSHAAS-DRAVRILCSVCKFSATARVLQEML 355
LL +C GR E+ K +G V +LR + ++ IL +C + ++ E+
Sbjct: 281 GLLVKCRGGREEMSKV-SGFVEVLVNVLRNGNLKGIQYSLFILNCLC--CCSGEIVDEVK 337
Query: 356 QVGVVSKLCLVLQVDASVKTKERA 379
+ GVV ++C + + S K + A
Sbjct: 338 REGVV-EICFGFEDNESEKIRRNA 360
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 38/288 (13%)
Query: 1 MEEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDL 60
+ + +PA F CPI+L+LMRDPV V+TG TYDR +I+ W+ +NTCP T QVL+ T L
Sbjct: 269 LSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWI-QSGHNTCPKTGQVLKHTSL 327
Query: 61 TSTTPNHTLRRLIQAWC-------TINACHGIERIPTP-QPPVDKTQIVKILNDAKKSPS 112
PN L+ LI WC + G E P P + V+ T+++ K S +
Sbjct: 328 ---VPNRALKNLIVLWCRDQKIPFELYGDGGGE--PAPCKEAVEFTKMMVSFLIEKLSVA 382
Query: 113 TGRKCLRRLRSITLQSERNRSCLEAAGAI----EFLATIITKSDAGSDECD----EALSI 164
+ LR++ R+C+ AGAI +LAT EC A++
Sbjct: 383 DSNGVVFELRALAKSDTVARACIAEAGAIPKLVRYLAT----------ECPSLQINAVTT 432
Query: 165 LYHLNVSESYLKSIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLIS 223
+ +L++ E I+ +G L ++ VL+ G +++++ A L S+ V+ + +
Sbjct: 433 ILNLSILEQNKTRIMETDGA--LNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLG 490
Query: 224 VKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGG 271
K + +V++ + Q + + AL ++ L N + VE G
Sbjct: 491 RKARVVSGLVDLAK---QGPTSSKRDALVAILNLVAERENVGRFVEAG 535
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 33/289 (11%)
Query: 10 FLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPNHTL 69
LCPISL++M DPV + TG TYDR +I +W F N TCP+T ++L T+L N ++
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKW-FGSGNITCPITGKILTSTELVD---NVSV 347
Query: 70 RRLIQAWCTINAC--HGIER--------IPTPQPPVDKTQIV------KILNDAKKSPST 113
R++I+ C N GI R +P +++ +++N ++
Sbjct: 348 RQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMI-- 405
Query: 114 GRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSES 173
+ +R +R T S NRSCL AGA+ L +++ D E A++ + LN+S+
Sbjct: 406 -YRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQE--NAMAGI--LNLSKH 460
Query: 174 YL-KSIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTE 231
KS + G L+ L+ +L G ++R Y+ L + V D +LI +
Sbjct: 461 VTGKSKIAGEG---LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPG 517
Query: 232 IVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLL 280
++N+++ + A ++AL ++ L N + + G V +L+DLL
Sbjct: 518 LMNIVKG-DDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLL 565
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 140/291 (48%), Gaps = 29/291 (9%)
Query: 1 MEEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDL 60
+E + P F CP+S +LMRDPV +++G TYD++ I++WL + N TCP T+QVL T L
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWL-SSGNRTCPKTQQVLPHTAL 127
Query: 61 TSTTPNHTLRRLIQAWCTINACHGIERIPTPQPP-VDKTQIV-----KILND-----AKK 109
TPN +R +I WC N G+E P V++ + V +I N +
Sbjct: 128 ---TPNLLIREMISKWCKKN---GLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSS 181
Query: 110 SPSTGRKCLRRLRSITLQSERNRSCL-EAAGAIEFLAT-IITKSDAGSDECDEALSILYH 167
+ + + LR +T + R+ E+ I L ++ S+ ++ ++ L +
Sbjct: 182 NLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLN 241
Query: 168 LNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVA--DPFQLISVK 225
+++ + K +V N + L+ L+ G +RS A +IF ++ D +++ K
Sbjct: 242 ISIHDDSNKKLVCEN-PNVIPLLIDALRRGTVATRSNAAA---AIFTLSALDSNKVLIGK 297
Query: 226 QEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVL 276
++++L + + + + AA + LC NR +AV G V VL
Sbjct: 298 SGILKPLIDLLEEGNPLAIKDVAAA---IFTLCIAHENRSRAVRDGAVRVL 345
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 188/455 (41%), Gaps = 84/455 (18%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P CPISLQLM DPV +++G TY+RV IE+W F+ +N+CP T+Q L L TPN
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKW-FSDGHNSCPKTQQQLPHLSL---TPN 331
Query: 67 HTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSP------STGRKCLRR 120
+ ++ LI +WC N GI +PT P ++ +SP S G +
Sbjct: 332 YCVKGLIASWCEQN---GI-TVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKD 387
Query: 121 LRSITL-----------QSERNRSCLEAAGAIEFLA------TIITKSDAGSDEC----- 158
+R + L Q E+N + E I L I+ K + + +C
Sbjct: 388 IRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVEN 447
Query: 159 -------DEALSILYHLN-VSESYLK----------------------SIVINNG---EE 185
+E IL N E++L+ ++ +NN E
Sbjct: 448 VRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKEL 507
Query: 186 FLES-----LMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLRDHH 240
L S L +++ C Q + A+ L S E A P S FF + +L+D
Sbjct: 508 MLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNL--LLQD-- 563
Query: 241 QFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELMLNVLDLLC 300
Q AL L L + N I + + + +L E L VL L
Sbjct: 564 -TKTQCKLDALHALYNLSTYSPN-IPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLA 621
Query: 301 RCAEGRAELLKHGAGLAVVSKKILRVSHAASDRAVRILCSVCKFSATARVLQEMLQVGVV 360
EG+ E++ ++ ++ + ++AV L +C + + +Q +LQ GV+
Sbjct: 622 SSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILC--TGSESCIQMVLQEGVI 679
Query: 361 SKLCLVLQVDASVKTKERAREILKL-NARAWRDSP 394
L + + V+ S + +++++++L L + RD P
Sbjct: 680 PSL-VSISVNGSPRGRDKSQKLLMLFREQRHRDQP 713
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P CPISLQLM DPV +++G TY+RV IE+W F+ +NTCP T+Q L L TPN
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKW-FSDGHNTCPKTQQQLPHISL---TPN 328
Query: 67 HTLRRLIQAWCTINACHGIERIPTPQP 93
+ ++ LI +WC N +IP+ P
Sbjct: 329 NCVKGLIASWCEQNGT----QIPSGPP 351
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 181/412 (43%), Gaps = 51/412 (12%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
VP F CPISL LMRDPV STG TYDR +I +W+ ++TCP + Q L + L
Sbjct: 295 FSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEE-GHSTCPNSGQTLADHRL--- 350
Query: 64 TPNHTLRRLIQAWCTINACHGIE--------------------RIPTPQPPVDKTQIVKI 103
PN LR LI WC + +G++ R +V++
Sbjct: 351 VPNRALRSLISQWCGV---YGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRM 407
Query: 104 LNDAKKSPSTGRKCLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALS 163
L D S + + +R + ++NR+ + GAI L ++ +D + E A++
Sbjct: 408 LEDG--SENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQE--NAVT 463
Query: 164 ILYHLNVSESYLKSIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLI 222
L +L++ E I+ G L ++ VL+ G +++ A L S+ V + +LI
Sbjct: 464 ALLNLSIFEPNKGRIMEQEG--CLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLI 521
Query: 223 SVKQEFFTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLD 282
+ E+ ++L + + + K A+ L L + + +E V L+ L +
Sbjct: 522 MNEPGAVEELASML---TKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRN 578
Query: 283 VTERRVCELMLNVLDLLCRCAEGRAELLKH--GAGLAVVSKKI---LRVSHAASDRAVRI 337
T V E L LL + + H G+ V++ + R + + AV
Sbjct: 579 DT---VSEEAAGALALLMKQPS-----IVHLVGSSETVITSLVGLMRRGTPKGKENAVSA 630
Query: 338 LCSVCKFSATARVLQEMLQVGVVSKLCLVLQVDASVKTKERAREILKLNARA 389
L +C+ +A V Q + ++ ++ + + ++ + + K++A I+K+ R+
Sbjct: 631 LYEICRRGGSALV-QRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRS 681
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 45/356 (12%)
Query: 12 CPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPNHTLRR 71
CPISL++M DPV + +G TYDR +I +W F N TCP T + L T L N ++++
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKW-FASGNITCPKTGKTLVSTVLVD---NFSVKQ 339
Query: 72 LIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTGR---------------K 116
+IQ++ N + Q K + + L + T K
Sbjct: 340 VIQSYSKQNG------VVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVK 393
Query: 117 CLRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLK 176
L +R +T S RSCL AG +E L I+ D E A++ + +L+ +
Sbjct: 394 ALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQE--NAMAGIMNLSKDIAGKT 451
Query: 177 SIVINNGEEFLESLMRVLKCG-NYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNV 235
IV +G L ++ VL G +SR YA L + + D +LI + +V +
Sbjct: 452 RIVGEDGGG-LRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRI 510
Query: 236 LR--DHHQFSQQASKAALKLLVELCPWGRNRIKAVEGGGVSVLVDLLLDVTERRVCELML 293
++ D+ +++ + A++ L+ P RI A G V VL+DL+ +E +
Sbjct: 511 VKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILA--AGIVPVLLDLV--KSEEISDGVTA 566
Query: 294 NVLDLLCRCAE---GRAELLKHGA-GLAVVSKKIL---RVSHAASDRAVRILCSVC 342
+ + +L + AE G +L+ G LAV KIL VS A V +L ++C
Sbjct: 567 DSMAILAKMAEYPDGMISVLRRGGLKLAV---KILGSSEVSPATKQHCVALLLNLC 619
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 8 AHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPNH 67
A F CP+SL++M DPV VS+G TY++ I+RW+ CP T+Q L T L PN+
Sbjct: 232 ADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI-DLGLKVCPKTRQTLTHTTL---IPNY 287
Query: 68 TLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKKSPSTG 114
T++ LI WC N ++P P ++ +L+ PSTG
Sbjct: 288 TVKALIANWCETNDV----KLPDPNKSTSLNELSPLLSCTDSIPSTG 330
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P CPISLQLM DPV +++G TY+R+ IE+W F+ +NTCP T Q L L TPN
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKW-FSDGHNTCPKTHQQLSHLCL---TPN 335
Query: 67 HTLRRLIQAWCTINA 81
+ ++ LI +WC N
Sbjct: 336 YCVKALISSWCEQNG 350
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P F+CPI+ Q+ DPVT+ TG TY+R I+ WL T N TCP+T+Q L L T N
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTG-NTTCPITRQALSANILPKT--N 570
Query: 67 HTLRRLIQAW 76
+ L+RLI +W
Sbjct: 571 YVLKRLIVSW 580
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
I +P +F CP+S +LM DPV V++G T+DR +I++WL CP T+QVL +L
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGL-AVCPRTRQVLTHQEL--- 291
Query: 64 TPNHTLRRLIQAW-------CTINACH 83
PN+T++ +I +W N+CH
Sbjct: 292 IPNYTVKAMIASWLEANRINLATNSCH 318
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 19/274 (6%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+EVP F+C +S ++M +P+ +++G T+++ I WL TCP TKQVL +
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWL--KHERTCPRTKQVLYHRFM--- 117
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVD-KTQIVKILNDAKKSPSTGRKCLRRLR 122
PNH + +I+ WC I H +R T +D T ++ L SPS+ +
Sbjct: 118 IPNHLINEVIKEWCLI---HNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAK 174
Query: 123 SITLQSERNRS-CL----EAAGAIEFLATIITKSDAGSDECDEALSILYHLNVSESYLKS 177
+ L+++R S C+ + +I L T ++ S+ + E E + H+ + K+
Sbjct: 175 ELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKNKT 234
Query: 178 IVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEFFTEIVNVLR 237
+V N L L + +K G +R ++ + S+ D ++I E +++V+
Sbjct: 235 LVAENP-LVLPLLAKYMKQGTVLTRIHSAATVNSL-SYTDSNKIIIGNSEVLKALIHVIE 292
Query: 238 DHHQFSQQASKAALKLLVELCPWGRNRIKAVEGG 271
+ A+ A L LCP KAV G
Sbjct: 293 EGDSL---ATSEAFSALSNLCPVKEISEKAVSEG 323
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P F+CPI+ Q+ DPVT+ TG TY+R I+ WL T N TCP+T+Q L + L T N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRT-GNTTCPITRQPLSASILPKT--N 568
Query: 67 HTLRRLIQAWCTINA--CHGIERIPTPQ-----PPVDKTQIVKILNDAKKSPSTGRKCLR 119
+ L+RLI +W N + TP+ P ++ SP+ K
Sbjct: 569 YVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYA 628
Query: 120 RLRS 123
R RS
Sbjct: 629 RQRS 632
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P F+CPI+ Q+ DPVT+ TG TY+R I+ WL T N TCP+T+Q L + L T N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRT-GNTTCPITRQPLSASILPKT--N 568
Query: 67 HTLRRLIQAWCTINA--CHGIERIPTPQ-----PPVDKTQIVKILNDAKKSPSTGRKCLR 119
+ L+RLI +W N + TP+ P ++ SP+ K
Sbjct: 569 YVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYA 628
Query: 120 RLRS 123
R RS
Sbjct: 629 RQRS 632
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+ VP+ F C +SL+LM DPV V++G T++RV I++W+ CP T+Q L T L
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWI-DMGLMVCPKTRQALSHTTL--- 293
Query: 64 TPNHTLRRLIQAWCTINACH 83
TPN +R + +WC N +
Sbjct: 294 TPNFIVRAFLASWCETNNVY 313
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 32/272 (11%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+EVP F C +S +M DPV + +G TY++ I WL + TCP KQVL L
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL--NHDLTCPTAKQVLYRVCL--- 126
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDKTQIVKILNDAKK-------SPSTG-R 115
TPNH + LI WC N P P+P D + ++ D + SPS+
Sbjct: 127 TPNHLINELITRWCLANKYDR----PAPKPS-DIDYVTELFTDGIESLLQRISSPSSSVA 181
Query: 116 KCLRRLRSITLQSE-----RNRSCLEAAGAIEFLATIIT----KSDAGSDECDEALSILY 166
+ + LQ+E R+ E +I L T ++ + D+ + + ++ L+
Sbjct: 182 DQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALF 241
Query: 167 HLNVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQ 226
+++ E V+ + + L + +K G+ +R A + L S+ ++ D ++I
Sbjct: 242 NMSTFEK--NKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDI-DSNKIIIGNS 298
Query: 227 EFFTEIVNVLRDHHQFSQQASKAALKLLVELC 258
+++++ + S A+ AL +++LC
Sbjct: 299 VALKALIDLIGELDDLS--ATHDALCAVIDLC 328
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 44/205 (21%)
Query: 10 FLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNN----TCPVTKQVLQETDLTSTTP 65
F+CP++ Q+M +PVT+ G T++R IE+W C+ N +CP+T + L TDL +P
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDL---SP 85
Query: 66 NHTLRRLIQAWCTIN------------------------------ACHGIERIPTPQPPV 95
+ LR I+ W N C I +I + V
Sbjct: 86 SIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKI---RQRV 142
Query: 96 DKTQIVKILNDAKKSPSTGRKC--LRRLRSITLQSERNRSCLEAAGAIEFLATIITKSDA 153
Q+V+++ D KS S +C L+ L+ + E +++ + + + +++ +
Sbjct: 143 CNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPS 202
Query: 154 GSDECDEALSILYHLNVSESYLKSI 178
E A+S+L+ L+ SE+ + I
Sbjct: 203 KGREA--AVSVLFELSKSEALCEKI 225
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
P FLCPI+ ++M+DPV + G +Y+R IE W+ T KN T P+T LQ T L TP
Sbjct: 417 TPDEFLCPITREIMKDPVIAADGYSYEREAIEAWIST-KNRTSPMTNLPLQTTLL---TP 472
Query: 66 NHTLRRLIQAWCT 78
N TL+ I W T
Sbjct: 473 NRTLKMAIFRWST 485
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 33/283 (11%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+EVP F+C +S +M +PV +++G TY++ I WL TCP TKQVL
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWL--KHERTCPKTKQVLSH---RLW 124
Query: 64 TPNHTLRRLIQAWCTINACHGIERIPTPQPPVDK------TQIVKILNDAKKSPSTGRKC 117
PNH + LI WC +N Q P D+ T ++ L S S+
Sbjct: 125 IPNHLISDLITQWCLVNKYDH-------QKPSDELVAELFTSDIEALLQRVSSSSSVADQ 177
Query: 118 LRRLRSITLQSER--NRSCLEAAGAIEFLATIITKSDAGSDECDEALSI-------LYHL 168
+ + + Q+++ N AG + + +++ + D +L + L++L
Sbjct: 178 IEAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNL 237
Query: 169 NVSESYLKSIVINNGEEFLESLMRVLKCGNYQSRSYAIMLLKSIFEVADPFQLISVKQEF 228
++ ES K+++ N + L + LK G ++R A L S+ + D ++I E
Sbjct: 238 SILESN-KTVIAENC-LVIPLLTKSLKQGTDETRRNAAATLSSLSAI-DSNKIIIGNSEA 294
Query: 229 FTEIVNVLRDHHQFSQQASKAALKLLVELCPWGRNRIKAVEGG 271
+++++ + A+K A + LC N+ K V G
Sbjct: 295 VKALIDLIEEGDLL---ATKEATSTVFNLCIVLENKGKVVSAG 334
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34
PE=3 SV=1
Length = 801
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 4 IEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTST 63
+ P+H+ CPI ++M +P + G TY+R I WL K+N PVT+Q L L
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWL--EKHNISPVTRQKLDHFKL--- 777
Query: 64 TPNHTLRRLIQAW 76
TPNHTLR I+ W
Sbjct: 778 TPNHTLRSAIRDW 790
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 6 VPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTP 65
+P F C +S +M DPV +S+G T++R+ I++W F N++CP++K+ L + L P
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKW-FDEGNDSCPISKRKLDDFTL---KP 274
Query: 66 NHTLRRLIQAWCTINA 81
N L+ I WC N
Sbjct: 275 NVELKSQISEWCAKNG 290
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P++F+CPIS ++MR+P + G TY+ ++ WL + T P+T L +L PN
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNG-HETSPMTNLKLAHNNL---VPN 553
Query: 67 HTLRRLIQAWCTINA 81
H LR IQ W N+
Sbjct: 554 HALRSAIQEWLQRNS 568
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 2 EEIEVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLT 61
E E P +F+CPISL++M+DP + G TY+ I WL + T P+T L T L
Sbjct: 321 EHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWL-QGGHETSPMTNTKLHHTKL- 378
Query: 62 STTPNHTLRRLIQAW 76
PN LR IQ W
Sbjct: 379 --VPNLALRSAIQEW 391
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana
GN=PUB44 PE=1 SV=1
Length = 801
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 10 FLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNN----TCPVTKQVLQETDLTSTTP 65
F+CP++ ++M DPVT+ G T++R IE+W C+++ +CP+T Q L TD++++
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASI- 85
Query: 66 NHTLRRLIQAWCTIN 80
LR I+ W + N
Sbjct: 86 --ALRNTIEEWRSRN 98
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
++P+ F+CPI ++M++P + G +Y+ I+ WL + ++T P+T L D T
Sbjct: 688 DIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWL-SMGHDTSPMTNLRL---DYQMLT 743
Query: 65 PNHTLRRLIQAWCTINACH 83
PNHTLR LIQ W + A
Sbjct: 744 PNHTLRSLIQDWHSKRAAQ 762
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 7 PAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTTPN 66
P+HF CP+ +M++P + G TYDR IE W+ + T PVT LQ +L PN
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHR--TSPVTNSPLQNVNL---LPN 804
Query: 67 HTLRRLIQAWCTIN 80
HTL I W N
Sbjct: 805 HTLYAAIVEWRNRN 818
>sp|Q9STT1|PUB39_ARATH U-box domain-containing protein 39 OS=Arabidopsis thaliana
GN=PUB39 PE=2 SV=1
Length = 509
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 5 EVPAHFLCPISLQLMRDPVTVSTGITYDRVNIERWLFTCKNNTCPVTKQVLQETDLTSTT 64
E P FLCPI+ LM DPV V++G T++R++++ C+N + + DL++
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQ----VCRNLSFAPKLHDGTQPDLSTVI 64
Query: 65 PNHTLRRLIQAWCTINACHGIERIPTPQPP 94
PN ++ I +WC N ++ P+PP
Sbjct: 65 PNLAMKSTILSWCDRN------KMEHPRPP 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,606,285
Number of Sequences: 539616
Number of extensions: 4905145
Number of successful extensions: 13052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 12812
Number of HSP's gapped (non-prelim): 122
length of query: 407
length of database: 191,569,459
effective HSP length: 120
effective length of query: 287
effective length of database: 126,815,539
effective search space: 36396059693
effective search space used: 36396059693
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)