Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>040074
MDDQEQQDQQHQVDQQMQSVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAP
LTDFDEPAVQPAVETELQASDDFPPPLDHQKLYFRLTIVKEPRHEIDAMEEELKIKDELV
QKQEKVIQELKKELRDRLDKHNAELERV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040074
        (148 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2085156 - symbol:AT3G52860 "AT3G52860" species...   161  6.4e-12   1


>TAIR|locus:2085156 [details] [associations]
            symbol:AT3G52860 "AT3G52860" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016592 "mediator complex" evidence=IDA]
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351
            EMBL:AL132969 GO:GO:0016592 EMBL:BT005037 EMBL:AK117706
            IPI:IPI00532484 PIR:T47543 RefSeq:NP_190854.1 UniGene:At.24701
            UniGene:At.60941 IntAct:Q9LFA5 PRIDE:Q9LFA5
            EnsemblPlants:AT3G52860.1 GeneID:824452 KEGG:ath:AT3G52860
            TAIR:At3g52860 eggNOG:NOG317755 InParanoid:Q9LFA5 KO:K15141
            OMA:CLPAREL PhylomeDB:Q9LFA5 ProtClustDB:CLSN2684890
            Genevestigator:Q9LFA5 Uniprot:Q9LFA5
        Length = 156

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 49/133 (36%), Positives = 77/133 (57%)

Query:    25 EIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASDDFP 84
             +IED++ACV  ++ ALLPCL   +L +AI  D  +P      P+ Q  ++ E  A D F 
Sbjct:    37 DIEDIMACVTALEAALLPCLPAREL-QAI--D-RSP-----HPSHQ--IDVERHARD-FM 84

Query:    85 PPLDHQKLYFRLTIVKEPR---------HEIDAMEEELKIKDELVQKQEKVIQELKKELR 135
                   +LYF + + +E R          +I  MEEELK KDEL++K  ++ QE +K ++
Sbjct:    85 EAAKKLQLYF-MGLKREDRAPSRAESLKKDIAVMEEELKTKDELIKKHMRLFQESQKLVK 143

Query:   136 DRLDKHNAELERV 148
             ++++KH  ELE+V
Sbjct:   144 EQIEKHRDELEKV 156


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      148       126   0.00091  102 3  11 22  0.41    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  499 (53 KB)
  Total size of DFA:  112 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.06u 0.11s 23.17t   Elapsed:  00:00:01
  Total cpu time:  23.06u 0.11s 23.17t   Elapsed:  00:00:01
  Start:  Mon May 20 18:03:20 2013   End:  Mon May 20 18:03:21 2013

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