BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040074
(148 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449469116|ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Cucumis sativus]
gi|449484322|ref|XP_004156851.1| PREDICTED: mediator of RNA polymerase II transcription subunit
28-like [Cucumis sativus]
Length = 141
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 87/148 (58%), Gaps = 21/148 (14%)
Query: 8 DQQHQVDQQMQSVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEP 67
DQQH +D Q+QS Q+ EDMIA V ++ ALLPCL +L + P
Sbjct: 8 DQQHSLDPQLQS--SQSPREDMIAYVMALEAALLPCLPARELQ---------AIDRSPHP 56
Query: 68 AVQPAVETELQASDDFPPPLDHQKLYF-------RLTIVKEPRHEIDAMEEELKIKDELV 120
+ Q VE + + DF +LYF + T V+ R EI A+EEELK+K+E++
Sbjct: 57 SHQVDVE---RHARDFMEAAKKLQLYFIGLQREDQPTKVETLRKEISAIEEELKVKNEII 113
Query: 121 QKQEKVIQELKKELRDRLDKHNAELERV 148
+KQEK+I+ KK+L+D+LDKHN ELE+V
Sbjct: 114 KKQEKLIEGWKKDLKDQLDKHNNELEKV 141
>gi|356512776|ref|XP_003525092.1| PREDICTED: uncharacterized protein LOC100815419 [Glycine max]
Length = 141
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 81/155 (52%), Gaps = 21/155 (13%)
Query: 1 MDDQEQQDQQHQVDQQMQSVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAP 60
M D++ DQQH D Q+ S + DM++CV ++ ALLPCL +L +
Sbjct: 1 MGDRQVVDQQHMGDPQLPSSPPSKD--DMVSCVMALEAALLPCLPARELQAIDRSPHPSH 58
Query: 61 LTDFDEPAVQPAVETELQASDDFPPPLDHQKLYF-------RLTIVKEPRHEIDAMEEEL 113
D D A DF +LYF + T V+ R EI MEEEL
Sbjct: 59 QIDVDRYA------------RDFMEAAKKLQLYFISLQREDKPTKVEMLRKEIALMEEEL 106
Query: 114 KIKDELVQKQEKVIQELKKELRDRLDKHNAELERV 148
IK+EL++KQE +IQE KKEL+D+LDKH EL+RV
Sbjct: 107 NIKNELIKKQENLIQEWKKELKDQLDKHKIELDRV 141
>gi|255564204|ref|XP_002523099.1| conserved hypothetical protein [Ricinus communis]
gi|223537661|gb|EEF39284.1| conserved hypothetical protein [Ricinus communis]
Length = 140
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 19/132 (14%)
Query: 24 AEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASDDF 83
A EDMI CV ++ ALLPCL +L + P+ Q VE + + DF
Sbjct: 21 AATEDMIECVMALEAALLPCLPARELQ---------AIDRSPHPSHQIDVE---RHARDF 68
Query: 84 PPPLDHQKLYF-------RLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRD 136
+LYF + T + R EI MEEELKIKDE+++KQE++IQE +KEL D
Sbjct: 69 MEAAKKLQLYFIGLQREDQPTAAETLRKEIAVMEEELKIKDEIIKKQERLIQEWRKELTD 128
Query: 137 RLDKHNAELERV 148
+L KH ELERV
Sbjct: 129 QLQKHKTELERV 140
>gi|225437408|ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246950 [Vitis vinifera]
Length = 139
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 19/129 (14%)
Query: 27 EDMIACVNVMDDALLPCLTELDL---NKAIMP----DFEAPLTDFDEPAVQPAVETELQA 79
+DMIACV ++ ALLPCL +L +++ P D E DF E A + V
Sbjct: 23 QDMIACVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQVYFISLQ 82
Query: 80 SDDFPPPLDHQKLYFRLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLD 139
+D P T + R EI MEEEL++K EL+ KQE++IQ +KEL+D+LD
Sbjct: 83 REDQP------------TKAETLRKEIAVMEEELRLKTELINKQERLIQGWRKELKDQLD 130
Query: 140 KHNAELERV 148
KHN ELERV
Sbjct: 131 KHNTELERV 139
>gi|356525553|ref|XP_003531389.1| PREDICTED: uncharacterized protein LOC100789247 [Glycine max]
Length = 141
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 1 MDDQEQQDQQHQVDQQMQSVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAP 60
M D+ DQQH D Q+ S +DM++CV ++ ALLPCL +L +
Sbjct: 1 MGDRLVVDQQHTGDAQLPS--SPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSH 58
Query: 61 LTDFDEPAVQPAVETELQASDDFPPPLDHQKLYF-------RLTIVKEPRHEIDAMEEEL 113
D D A DF +LYF + T ++ R E+ MEEEL
Sbjct: 59 QIDVDRYA------------RDFMEAAKKLQLYFISLQREDKPTKLEMLRKEVALMEEEL 106
Query: 114 KIKDELVQKQEKVIQELKKELRDRLDKHNAELERV 148
K+EL++KQE +IQE KKEL+D+LDKH EL+RV
Sbjct: 107 NKKNELIKKQENLIQEWKKELKDQLDKHKIELDRV 141
>gi|224131100|ref|XP_002321001.1| predicted protein [Populus trichocarpa]
gi|222861774|gb|EEE99316.1| predicted protein [Populus trichocarpa]
Length = 115
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 19/127 (14%)
Query: 29 MIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASDDFPPPLD 88
MI CV ++ ALLPCL +L + P+ Q VE + + DF
Sbjct: 1 MIGCVMALEAALLPCLPARELQ---------AIDRSPHPSHQIDVE---RHARDFMEAAK 48
Query: 89 HQKLYF-------RLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLDKH 141
+LYF + T+ + R +I MEEELK+KDEL+++QE++IQ KEL+D+ +KH
Sbjct: 49 KLQLYFIGLQREDQPTMSETLRKDIGMMEEELKVKDELIKRQERLIQGWWKELKDQAEKH 108
Query: 142 NAELERV 148
N ELERV
Sbjct: 109 NTELERV 115
>gi|326529489|dbj|BAK04691.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 146
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 21/129 (16%)
Query: 28 DMIACVNVMDDALLPCL-------TELDLNKAIMPDFEAPLTDFDEPAVQ-PAVETELQA 79
DM+ACV ++ ALLPCL + L + D E DF E A + + LQ
Sbjct: 31 DMMACVAALEAALLPCLPARELQAVDRSLQSSHQIDVERHARDFMEAAKKLQSYFISLQR 90
Query: 80 SDDFPPPLDHQKLYFRLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLD 139
D P + + L R EI MEEELK K EL+ K + +I+ +KEL+D+L
Sbjct: 91 EDQ---PTNEELL----------RKEITTMEEELKTKSELIAKHKSLIEGWQKELKDQLG 137
Query: 140 KHNAELERV 148
KHN ELERV
Sbjct: 138 KHNTELERV 146
>gi|226492024|ref|NP_001143902.1| uncharacterized protein LOC100276705 [Zea mays]
gi|195629348|gb|ACG36315.1| hypothetical protein [Zea mays]
gi|413948788|gb|AFW81437.1| hypothetical protein ZEAMMB73_104324 [Zea mays]
Length = 145
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 67/141 (47%), Gaps = 37/141 (26%)
Query: 24 AEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASD-- 81
+EDM+ACV ++ ALLPCL +L AV+ LQ+S
Sbjct: 26 GGLEDMLACVAALEAALLPCLPARELQ---------------------AVDRSLQSSHQI 64
Query: 82 -------DFPPPLDHQKLYFRLTIVKEP-------RHEIDAMEEELKIKDELVQKQEKVI 127
DF + YF +EP R EI MEEELK K EL+ K +K+I
Sbjct: 65 DVERHARDFMEAAKKLQSYFISLQREEPPSAEEMLRKEITTMEEELKSKSELIAKHKKLI 124
Query: 128 QELKKELRDRLDKHNAELERV 148
+ +KEL+++L KH ELERV
Sbjct: 125 EGWQKELKEQLSKHITELERV 145
>gi|357134587|ref|XP_003568898.1| PREDICTED: uncharacterized protein LOC100840919 [Brachypodium
distachyon]
Length = 146
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 21/129 (16%)
Query: 28 DMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPA--VETELQASDDFPP 85
DM+ACV ++ ALLPCL P E D ++Q + ++ E A D
Sbjct: 31 DMMACVAALEAALLPCL----------PARELQAVD---RSLQSSHQIDVERHARDFMEA 77
Query: 86 PLDHQKLYFRLTIVKEP------RHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLD 139
Q + L +P + EI MEEELK K EL+ K +K+I+ +KEL+D+L
Sbjct: 78 AKKLQSYFISLQREDQPTTEEMLQKEIATMEEELKTKSELIAKHKKLIEGWQKELKDQLG 137
Query: 140 KHNAELERV 148
KHN ELERV
Sbjct: 138 KHNTELERV 146
>gi|242089591|ref|XP_002440628.1| hypothetical protein SORBIDRAFT_09g004280 [Sorghum bicolor]
gi|241945913|gb|EES19058.1| hypothetical protein SORBIDRAFT_09g004280 [Sorghum bicolor]
Length = 145
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 39/139 (28%)
Query: 27 EDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASD----- 81
EDM+ACV ++ ALLPCL +L AV+ LQ+S
Sbjct: 29 EDMLACVAALEAALLPCLPARELQ---------------------AVDRSLQSSHQIDVE 67
Query: 82 ----DFPPPLDHQKLYFRLTIVKEP--------RHEIDAMEEELKIKDELVQKQEKVIQE 129
DF + YF +++ +E R EI MEEELK K EL+ K +K+I+
Sbjct: 68 RHARDFMEAAKKLQSYF-ISLQREDQPTAEEMLRKEITTMEEELKTKSELIAKHKKLIEG 126
Query: 130 LKKELRDRLDKHNAELERV 148
+KEL+++L KH ELERV
Sbjct: 127 WRKELKEQLGKHITELERV 145
>gi|357519693|ref|XP_003630135.1| hypothetical protein MTR_8g092180 [Medicago truncatula]
gi|355524157|gb|AET04611.1| hypothetical protein MTR_8g092180 [Medicago truncatula]
Length = 115
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 29 MIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASDDFPPPLD 88
MI+CV ++ ALLPCL +L + D D A DF
Sbjct: 1 MISCVMALEAALLPCLPARELQAIDRSPHPSHQIDVDRHA------------RDFMEAAK 48
Query: 89 HQKLYF-------RLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLDKH 141
+LYF + T + R EI ME+EL K+EL++KQE +IQE KKEL D+L+KH
Sbjct: 49 KLQLYFISLQREDKPTKAEMLRKEITLMEDELNEKNELIKKQEHLIQEWKKELSDQLEKH 108
Query: 142 NAELERV 148
N EL RV
Sbjct: 109 NIELNRV 115
>gi|297820014|ref|XP_002877890.1| hypothetical protein ARALYDRAFT_906664 [Arabidopsis lyrata subsp.
lyrata]
gi|297323728|gb|EFH54149.1| hypothetical protein ARALYDRAFT_906664 [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 20/138 (14%)
Query: 19 SVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQ 78
S Q +IED++ACV ++ ALLPCL +L + P+ Q VE +
Sbjct: 31 SNNQNHDIEDIMACVTALEAALLPCLPARELQ---------AIDRSPHPSHQIDVE---R 78
Query: 79 ASDDFPPPLDHQKLYFRL--------TIVKEPRHEIDAMEEELKIKDELVQKQEKVIQEL 130
+ DF +LYF T + R EI MEEEL+ KDEL++K ++ QE
Sbjct: 79 HARDFMEAAKKLQLYFMGLKREDRSPTRAESLRKEIAVMEEELQTKDELIKKHSRLFQES 138
Query: 131 KKELRDRLDKHNAELERV 148
+K ++++++KH ELE+V
Sbjct: 139 QKLVKEQIEKHRVELEKV 156
>gi|297743905|emb|CBI36875.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 19/121 (15%)
Query: 35 VMDDALLPCLTELDL---NKAIMP----DFEAPLTDFDEPAVQPAVETELQASDDFPPPL 87
++ ALLPCL +L +++ P D E DF E A + V +D P
Sbjct: 2 ALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQVYFISLQREDQP--- 58
Query: 88 DHQKLYFRLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLDKHNAELER 147
T + R EI MEEEL++K EL+ KQE++IQ +KEL+D+LDKHN ELER
Sbjct: 59 ---------TKAETLRKEIAVMEEELRLKTELINKQERLIQGWRKELKDQLDKHNTELER 109
Query: 148 V 148
V
Sbjct: 110 V 110
>gi|115462173|ref|NP_001054686.1| Os05g0154900 [Oryza sativa Japonica Group]
gi|54291848|gb|AAV32216.1| unknown protein [Oryza sativa Japonica Group]
gi|113578237|dbj|BAF16600.1| Os05g0154900 [Oryza sativa Japonica Group]
gi|215678528|dbj|BAG92183.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 146
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 37/137 (27%)
Query: 28 DMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASD------ 81
DM+ACV ++ ALLPCL +L AV+ LQ+S
Sbjct: 31 DMMACVAALEAALLPCLPARELQ---------------------AVDRSLQSSHQIDVER 69
Query: 82 ---DFPPPLDHQKLYF-------RLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELK 131
DF + YF R + + R +I MEEELK K EL+ K +K+I+ +
Sbjct: 70 HARDFMEAAKKLQSYFISLQREDRPSTEEMLRKDIAIMEEELKTKSELIDKHKKLIEGWQ 129
Query: 132 KELRDRLDKHNAELERV 148
KEL+D+L KH ELERV
Sbjct: 130 KELKDQLGKHVTELERV 146
>gi|15231698|ref|NP_190854.1| uncharacterized protein [Arabidopsis thaliana]
gi|75174078|sp|Q9LFA5.1|MED28_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
28
gi|7529710|emb|CAB86890.1| putative protein [Arabidopsis thaliana]
gi|26450487|dbj|BAC42357.1| unknown protein [Arabidopsis thaliana]
gi|28827452|gb|AAO50570.1| unknown protein [Arabidopsis thaliana]
gi|332645480|gb|AEE79001.1| uncharacterized protein [Arabidopsis thaliana]
Length = 156
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 22/139 (15%)
Query: 19 SVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQ 78
S Q +IED++ACV ++ ALLPCL +L + P+ Q VE +
Sbjct: 31 SNNQNNDIEDIMACVTALEAALLPCLPARELQ---------AIDRSPHPSHQIDVE---R 78
Query: 79 ASDDFPPPLDHQKLYFRLTIVKEPR---------HEIDAMEEELKIKDELVQKQEKVIQE 129
+ DF +LYF + + +E R +I MEEELK KDEL++K ++ QE
Sbjct: 79 HARDFMEAAKKLQLYF-MGLKREDRAPSRAESLKKDIAVMEEELKTKDELIKKHMRLFQE 137
Query: 130 LKKELRDRLDKHNAELERV 148
+K ++++++KH ELE+V
Sbjct: 138 SQKLVKEQIEKHRDELEKV 156
>gi|294464443|gb|ADE77733.1| unknown [Picea sitchensis]
Length = 131
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 19/128 (14%)
Query: 28 DMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASDDFPPPL 87
D++ V ++ ALLPCL +L +AI D A +P+ Q VE + + DF
Sbjct: 16 DILNLVTALETALLPCLPAREL-QAI--DRSA------QPSHQIDVE---RHARDFMEAA 63
Query: 88 DHQKLYF-RLTIVKEP------RHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLDK 140
+LYF RL +P R EI A+EEELK+KDEL+Q+QEK++Q ++ L ++
Sbjct: 64 KKLQLYFIRLQHQNKPSKEEALRKEIQALEEELKVKDELIQRQEKLLQGWRELLTNQRAV 123
Query: 141 HNAELERV 148
H ELERV
Sbjct: 124 HLTELERV 131
>gi|218196123|gb|EEC78550.1| hypothetical protein OsI_18513 [Oryza sativa Indica Group]
Length = 177
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 71/147 (48%), Gaps = 26/147 (17%)
Query: 28 DMIACVNVMDDALLPCL-------TELDLNKAIMPDFEAPLTDFDEPAV----------- 69
DM+ACV ++ ALLPCL + L + D E DF E A
Sbjct: 31 DMMACVAALEAALLPCLPARELQAVDRSLQSSHQIDVERHARDFMEAAKKLQSYFISLQR 90
Query: 70 --QPAVETELQAS-DDFPPPLDHQKLYFRLTIVKEP-RH----EIDAMEEELKIKDELVQ 121
+P+ E L+ + D+ L + + K +H +I MEEELK K EL+
Sbjct: 91 EDRPSTEEMLRKNLDEKLNCLRELLILGKAAAAKSSLKHALGWDIAIMEEELKTKSELID 150
Query: 122 KQEKVIQELKKELRDRLDKHNAELERV 148
K +K+I+ +KEL+D+L KH ELERV
Sbjct: 151 KHKKLIEGWQKELKDQLGKHVTELERV 177
>gi|222630250|gb|EEE62382.1| hypothetical protein OsJ_17171 [Oryza sativa Japonica Group]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 68/177 (38%), Gaps = 61/177 (34%)
Query: 28 DMIACVNVMDDALLPCLTELDL---------NKAIMPDFEAPLTDFDEPAVQ-------- 70
D++ACV + ALLPCL DL + I DF +D D PAV
Sbjct: 31 DIMACVAPLKAALLPCLPARDLQARRRSLQSSHEITWDF----SDID-PAVSPSLLPLPP 85
Query: 71 --PAVETELQASDDFPPPLDHQKLYFRLTIVKEPRHE----------------------- 105
P V+ E A D Q + L P E
Sbjct: 86 SFPRVDVERHARDFMEAAKKLQSYFISLQREDRPSTEEMLRKNLDEKLNCLSELLILGKA 145
Query: 106 --------------IDAMEEELKIKDELVQKQEKVIQELKKELRDRLDKHNAELERV 148
I MEEELK K EL+ K +K+I+ +KEL+D+L KH ELERV
Sbjct: 146 AAAKSSLKHALGWDIAIMEEELKTKSELIDKHKKLIEGWQKELKDQLGKHVTELERV 202
>gi|168039990|ref|XP_001772479.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676276|gb|EDQ62761.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 149
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 31/134 (23%)
Query: 28 DMIACVNVMDDALLPCLTELDL---NKAIMPDFEAPLTDFDEPAVQPAVETELQASDDFP 84
D+++ V +D +LLPCL +L +++ P + V+ E A+D F
Sbjct: 34 DLLSLVASLDASLLPCLPARELQAVDRSTHPSHQ--------------VDVERHAAD-FM 78
Query: 85 PPLDHQKLYFRLTIVKEPRH----------EIDAMEEELKIKDELVQKQEKVIQELKKEL 134
+LYF I + RH EI A+E ELK+KD L++KQ K+++ + L
Sbjct: 79 EAAKTLQLYF---IRAQHRHQPSREEALKKEIAALEAELKVKDALMEKQSKLLRHWQSLL 135
Query: 135 RDRLDKHNAELERV 148
+ + H ELERV
Sbjct: 136 EAQKNTHIEELERV 149
>gi|302767380|ref|XP_002967110.1| hypothetical protein SELMODRAFT_87665 [Selaginella moellendorffii]
gi|300165101|gb|EFJ31709.1| hypothetical protein SELMODRAFT_87665 [Selaginella moellendorffii]
Length = 121
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
Query: 24 AEIEDMIACVNVMDDALLPCLTELDL---NKAIMP----DFEAPLTDFDEPAVQPAVETE 76
+ + ++ + V +D LLPCL +L +++ P D E +F E A Q V
Sbjct: 2 SSLNEVQSWVASLDATLLPCLPARELQAADRSTHPSHHVDVERHAREFMEAAKQLQVFF- 60
Query: 77 LQASDDFPPPLDHQKLYFRLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRD 136
++ + PP + ++K+ EI +E EL+ KDEL+++Q++++Q + L+
Sbjct: 61 IRVQHEHQPPKE--------ELLKK---EIAGLESELRAKDELIKRQKRLLQGWRDILKA 109
Query: 137 RLDKHNAELERV 148
+ KH ELERV
Sbjct: 110 QKLKHIHELERV 121
>gi|302754956|ref|XP_002960902.1| hypothetical protein SELMODRAFT_74394 [Selaginella moellendorffii]
gi|300171841|gb|EFJ38441.1| hypothetical protein SELMODRAFT_74394 [Selaginella moellendorffii]
Length = 121
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 24 AEIEDMIACVNVMDDALLPCLTELDL---NKAIMP----DFEAPLTDFDEPAVQPAVETE 76
+ + ++ + V +D LLPCL +L +++ P D E +F E A Q V
Sbjct: 2 SSLNEVQSWVASLDATLLPCLPARELQAADRSTHPSHHVDVERHAREFMEAAKQLQVFF- 60
Query: 77 LQASDDFPPPLDHQKLYFRLTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRD 136
++ + PP + ++K+ EI +E EL+ KDEL+++Q++++Q L+
Sbjct: 61 IRVQHEHQPPKE--------ELLKK---EIAGLESELRAKDELIKRQKRLLQGWSDILKA 109
Query: 137 RLDKHNAELERV 148
+ KH ELERV
Sbjct: 110 QKLKHIHELERV 121
>gi|392955536|ref|ZP_10321067.1| cobinamide kinase/cobinamide phosphate guanylyltransferase
[Bacillus macauensis ZFHKF-1]
gi|391878463|gb|EIT87052.1| cobinamide kinase/cobinamide phosphate guanylyltransferase
[Bacillus macauensis ZFHKF-1]
Length = 192
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 4 QEQQDQQHQVDQQMQSVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTD 63
+ QD + Q ++ +Q +E + A D LL CLT L N+ + +EA L
Sbjct: 49 KRHQDDRRHYHHQWKTWEQPRHVEQLAASFTAQDRVLLDCLTNLVSNE-LFVGWEAGLEP 107
Query: 64 FDEPAVQPA 72
+ EPA + A
Sbjct: 108 WREPAFRQA 116
>gi|301103500|ref|XP_002900836.1| Phosphatidylinositol kinase (PIK-L2) [Phytophthora infestans T30-4]
gi|262101591|gb|EEY59643.1| Phosphatidylinositol kinase (PIK-L2) [Phytophthora infestans T30-4]
Length = 2659
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 30 IACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASDDFPP--PL 87
+AC+ ++ D + P L +DL + P F+ D D P VET PP P+
Sbjct: 373 LACLRMLADTVGPALIRVDLESMVGPLFQ---NDLDS----PLVETLTTIVKKIPPMKPI 425
Query: 88 DHQKLYFRLTIVKEPRHE 105
QKL+ RL+ + H
Sbjct: 426 IQQKLFERLSSILRSSHN 443
>gi|223038974|ref|ZP_03609266.1| conserved hypothetical protein [Campylobacter rectus RM3267]
gi|222879947|gb|EEF15036.1| conserved hypothetical protein [Campylobacter rectus RM3267]
Length = 386
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 96 LTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLDKHNAELERV 148
+ I+ P ++ D +E+ LKI L+ K + ++K + RD ++ H AELE++
Sbjct: 4 ILILYNPYYQSDVIEQHLKI---LISKGKVAFGKIKSKRRDMINSHEAELEKI 53
>gi|301781392|ref|XP_002926112.1| PREDICTED: methyltransferase-like protein 4-like [Ailuropoda
melanoleuca]
gi|281346224|gb|EFB21808.1| hypothetical protein PANDA_015723 [Ailuropoda melanoleuca]
Length = 470
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 57 FEAPLTDFDEPAVQPAVETELQASDDFPPPLDHQKLYFRLTIVKEPRH-------EIDAM 109
F + L + +P + PAV E + + P+D K R++I+ + R E+DAM
Sbjct: 87 FRSELFNVTKPYITPAVHKECRQRKEKEDPVDGVKEESRISIIGKKRKRCVFNQGELDAM 146
Query: 110 EEELKIKDELVQKQEKVIQE 129
E KI+ ++ ++IQE
Sbjct: 147 EYHTKIRGLILDGSSELIQE 166
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,259,874,526
Number of Sequences: 23463169
Number of extensions: 93264175
Number of successful extensions: 711853
Number of sequences better than 100.0: 554
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 479
Number of HSP's that attempted gapping in prelim test: 708601
Number of HSP's gapped (non-prelim): 2957
length of query: 148
length of database: 8,064,228,071
effective HSP length: 111
effective length of query: 37
effective length of database: 9,754,783,608
effective search space: 360926993496
effective search space used: 360926993496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)