BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040074
         (148 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LFA5|MED28_ARATH Mediator of RNA polymerase II transcription subunit 28
           OS=Arabidopsis thaliana GN=MED28 PE=1 SV=1
          Length = 156

 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 22/139 (15%)

Query: 19  SVQQQAEIEDMIACVNVMDDALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQ 78
           S  Q  +IED++ACV  ++ ALLPCL   +L           +     P+ Q  VE   +
Sbjct: 31  SNNQNNDIEDIMACVTALEAALLPCLPARELQ---------AIDRSPHPSHQIDVE---R 78

Query: 79  ASDDFPPPLDHQKLYFRLTIVKEPR---------HEIDAMEEELKIKDELVQKQEKVIQE 129
            + DF       +LYF + + +E R          +I  MEEELK KDEL++K  ++ QE
Sbjct: 79  HARDFMEAAKKLQLYF-MGLKREDRAPSRAESLKKDIAVMEEELKTKDELIKKHMRLFQE 137

Query: 130 LKKELRDRLDKHNAELERV 148
            +K ++++++KH  ELE+V
Sbjct: 138 SQKLVKEQIEKHRDELEKV 156


>sp|Q9BDY8|ANGP1_PIG Angiopoietin-1 OS=Sus scrofa GN=ANGPT1 PE=2 SV=1
          Length = 498

 Score = 31.6 bits (70), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 103 RHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLDKHNAELER 147
           + E+D ++EE +    LV +Q  +IQELKK+L +R   +N+ L++
Sbjct: 206 KEELDTLKEEKENLQGLVTRQTYIIQELKKQL-NRATTNNSVLQK 249


>sp|Q8N3J2|METL4_HUMAN Methyltransferase-like protein 4 OS=Homo sapiens GN=METTL4 PE=2
           SV=3
          Length = 472

 Score = 31.2 bits (69), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 57  FEAPLTDFDEPAVQPAVETELQASDDFPPPLDHQKLYFRLTIVKEPR--------HEIDA 108
           F   L D  +P + PAV  E Q S++    ++  K    ++I+ + R         E+DA
Sbjct: 88  FRPELFDVTKPYITPAVHKECQQSNEKEDLMNGVKKEISISIIGKKRKRCVVFNQGELDA 147

Query: 109 MEEELKIKDELVQKQEKVIQE 129
           ME   KI++ ++    ++IQE
Sbjct: 148 MEYHTKIRELILDGSLQLIQE 168


>sp|Q3U034|METL4_MOUSE Methyltransferase-like protein 4 OS=Mus musculus GN=Mettl4 PE=2
           SV=1
          Length = 471

 Score = 30.8 bits (68), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 57  FEAPLTDFDEPAVQPAVETELQASDDFPPPLDHQKLYFRLTIVKEPRH-------EIDAM 109
           F + L +  +P + PAV  E Q S+     +   K    +++ K+ +        E+DAM
Sbjct: 88  FRSELFNVTKPYIVPAVHKERQQSNKNENLVTDYKQEVSVSVGKKRKRCIAFNQGELDAM 147

Query: 110 EEELKIKDELVQKQEKVIQE 129
           E   KI++ ++    K+IQE
Sbjct: 148 EYHTKIRELILDGSSKLIQE 167


>sp|A3Q9C4|CAPP_SHELP Phosphoenolpyruvate carboxylase OS=Shewanella loihica (strain ATCC
           BAA-1088 / PV-4) GN=ppc PE=3 SV=1
          Length = 878

 Score = 29.6 bits (65), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 91  KLYFR--LTIVKEPRHEIDAMEEELKIKDELVQKQEKVIQELKKELRDRLDKHNAELE 146
           +LY +  + +V E   E +A EE L + D   +    V++EL+++LRD +D  NA LE
Sbjct: 277 RLYLKDVVLLVNELSME-EANEELLALTDNSHEPYRVVLRELRQKLRDTIDYLNARLE 333


>sp|A5V3U6|TIG_SPHWW Trigger factor OS=Sphingomonas wittichii (strain RW1 / DSM 6014 /
           JCM 10273) GN=tig PE=3 SV=1
          Length = 551

 Score = 29.3 bits (64), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 38  DALLPCLTELDLNKAIMPDFEAPLTDFDEPAVQPAVETELQASDDFPPPLDHQKLYFRLT 97
           D +   L E  L  A+ P  E    D+ EP    A++ EL+   D PPP        RL+
Sbjct: 73  DGVQQLLAEQKLRPAMQPSVELVGGDY-EPGKDVALKVELEVLPDVPPPAIEGLKLERLS 131

Query: 98  IVKEPRHEIDA 108
            V+ P  EIDA
Sbjct: 132 -VEAPTDEIDA 141


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.132    0.363 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,303,681
Number of Sequences: 539616
Number of extensions: 2330251
Number of successful extensions: 22673
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 219
Number of HSP's that attempted gapping in prelim test: 18905
Number of HSP's gapped (non-prelim): 3500
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)