BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040080
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 77 PIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPICRSTANSRRFGEESSR 136
P +CAVCL +F++ DK RLLP+C+H+FH C+D WL +N CP+CR T S F E+
Sbjct: 140 PFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPM 199
Query: 137 FSDIDV-ELREGVPTEG----IELSDIRIE 161
F D+ E EGV G +E+ +I +E
Sbjct: 200 FDFDDIREDEEGVTENGSQKTMEIQEIVVE 229
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 2 VMAIIISVIFLFLGIGALIFIHVCIVARTFRAGLIRNNVGGAMVERSSIGSTSMSRDDVE 61
V A+++++ FL G+ ++ H RN R + + VE
Sbjct: 49 VFAVLVTLFFL-TGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRGGLDNAV-----VE 102
Query: 62 KLPCYEY--LAKSK-GSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNC 118
P + Y + +SK GS +ECA+CL++ + RLLPICNH FH C+D WL ++ C
Sbjct: 103 SFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATC 162
Query: 119 PICRS--TANSRRFGEE 133
P+CRS TA S + G+E
Sbjct: 163 PVCRSNLTAKSNKPGDE 179
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 17/140 (12%)
Query: 2 VMAIIIS---VIFLFLGIGALIFIHVCIVARTFRAGLIRNNVGGAMVERSS--------I 50
V+ ++IS +I +FLG+ LIF + + F + N + SS +
Sbjct: 119 VLCLVISGLALIIVFLGVLYLIFKFLRKSSTLF--PIPHFNYNPDLFSFSSPQLQHLFFL 176
Query: 51 GSTSMSRDDVEKLPCYEYLAKSKG-SSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVD 109
+ + + ++ LP + Y + P +CAVCL++F+ DK RLLP+C+H+FH C+D
Sbjct: 177 HDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCID 236
Query: 110 AWLLTNPNCPICR---STAN 126
WLL+N CP+CR ST+N
Sbjct: 237 TWLLSNSTCPLCRRSLSTSN 256
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 60 VEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCP 119
++ LP + Y P +CAVCL +F++ DK RLLP C+H+FH C+D WLL+N CP
Sbjct: 124 IDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCP 183
Query: 120 ICRST 124
+CR T
Sbjct: 184 LCRGT 188
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 16 IGALIFIHVCIVARTFRAGLIRNNVGGAMVERSSIGSTSMSR----DDVEKLPCYEY--- 68
I AL F+ V G + +V A R + + +++R + +E P + Y
Sbjct: 53 IAALFFMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEV 112
Query: 69 LAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPICRSTANSR 128
+ G +ECA+CL++F + RLLP C+H FH C+ AWL + CP+CR+ +
Sbjct: 113 KTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQ 172
Query: 129 RFGEESSRFSDIDVELREGVPTEGIELSDIRIELS 163
E +D++ + + VP +EL ++ S
Sbjct: 173 TPEPEVVVETDLEAQQQSAVPVPVVELPRVKFPRS 207
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 1 MVMAIIISVIFLFLGIGALIFIHVCIVARTFRAGLIRNNVGGAMVERSSIGSTSMSRDD- 59
+++ I+I+ +F F+G ++ F H V AG+ + GGA R+++ + + D
Sbjct: 51 VIVVILIAALF-FMGFFSIYFRHCSGVPD---AGV--SPAGGAR-SRATVNAAARGLDVS 103
Query: 60 -VEKLPCYEY---LAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTN 115
VE P + Y + G +ECA+CL++F + RLLP C+H FH C+DAWL +
Sbjct: 104 VVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAH 163
Query: 116 PNCPICRS 123
CP+CR+
Sbjct: 164 VTCPVCRA 171
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 12/82 (14%)
Query: 45 VERSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPI---ECAVCLDKFNKGDKCRLLPICNH 101
ERSS+ ++ LP +++ + ++ SS + +CAVCL KF D+ RLLP+C H
Sbjct: 88 TERSSV---------LDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCH 138
Query: 102 SFHAQCVDAWLLTNPNCPICRS 123
+FHA C+D WL++N CP+CRS
Sbjct: 139 AFHADCIDIWLVSNQTCPLCRS 160
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 34 GLIRNNVGGAMVERSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKC 93
GL + G + +R+ + + +++K P EY + + ECA+CL +F G++
Sbjct: 64 GLSSSAAAGTVADRAGL-----KKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERV 118
Query: 94 RLLPICNHSFHAQCVDAWLLTNPNCPICRST 124
R+LP CNHSFH C+D WL+++ +CP CR +
Sbjct: 119 RVLPPCNHSFHMSCIDTWLVSHSSCPNCRHS 149
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 47 RSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQ 106
+ ++ +T ++ ++ LP + + +EC++CL + KGDK RLLP CNHSFH +
Sbjct: 95 QDALSNTGLTSFELSSLPIV-FFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVE 153
Query: 107 CVDAWLLTNPNCPICRST 124
C+D W ++ CPICR+T
Sbjct: 154 CIDMWFQSHSTCPICRNT 171
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 2 VMAIIISVIFLFLGIGALIFIHVCIVARTFRAGLIRNNVGGAMVERSSIGSTSMSRDDVE 61
V+AII+ IF+ L + A C + +TF + R+ G + ++ VE
Sbjct: 51 VIAIIVLAIFISLSMVA------CFLHKTFYRAEVEAASQEVFHSRARRG---LEKELVE 101
Query: 62 KLPCYEY-----LAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNP 116
P + Y L KG +ECA+CL +F + R +P C+H+FHA C+D WL +
Sbjct: 102 SFPIFLYSEVKGLKIGKGG--VECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQS 159
Query: 117 NCPICRS 123
CP CR+
Sbjct: 160 TCPACRA 166
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 5 IIISVIFLFLGIGALIFIHVCIVARTFR----------------AGLIRNNVGGAMVERS 48
++ +++ LF + ++F+H + AR + A ++ + S
Sbjct: 31 MLSAIVILFFVVILMVFLH--LYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATS 88
Query: 49 SIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCV 108
+ S + + ++ LP + + + PIECAVCL +F + + R+LP C H+FH C+
Sbjct: 89 VVASRGLDPNVIKSLPVFTF-SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCI 147
Query: 109 DAWLLTNPNCPICRSTANS 127
D W ++ CP+CRS S
Sbjct: 148 DMWFHSHSTCPLCRSLVES 166
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 2 VMAIIISVIFLFLGIGALIFIHVCIVARTFRAGLIRNNVGGAMVERSSIGSTSMSRDDVE 61
++ I++ +F FLG + ++I C+ R N G + + + + +E
Sbjct: 65 ILMIVLVSVFFFLGFFS-VYIRRCL-ERVMGMDYGNPNDAGNWLATNRQQARGLDASIIE 122
Query: 62 KLPCYEYLAKSK---GSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNC 118
P ++Y G +EC+VCL++F + RL+P C H FH C+DAWL ++ C
Sbjct: 123 TFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTC 182
Query: 119 PICRS 123
P+CR+
Sbjct: 183 PLCRA 187
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 52 STSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAW 111
++ + R +E LP + + A S +ECAVCL +F + RLLP C H+FH +CVD W
Sbjct: 118 NSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTW 177
Query: 112 LLTNPNCPICR 122
L + CP+CR
Sbjct: 178 LDAHSTCPLCR 188
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 1 MVMAIIISVIFLFLGIGALIFIHVCIVAR------TFRAGLIRNNVG--GAMVERSSIGS 52
++ ++S+IF + ALI + V + R G+ ++ G R ++
Sbjct: 37 LLYITLLSIIFF---VAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNLHD 93
Query: 53 TSMSRDDVEKLPCYEYLAKSKGSSPI-ECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAW 111
+ + ++ LP Y + +CAVCL +F D+ RLLP C+H+FH +C+D W
Sbjct: 94 AEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTW 153
Query: 112 LLTNPNCPICR 122
LLTN CP+CR
Sbjct: 154 LLTNSTCPLCR 164
>sp|Q9M0C3|ATL14_ARATH RING-H2 finger protein ATL14 OS=Arabidopsis thaliana GN=ATL14 PE=2
SV=1
Length = 176
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 5 IIISVIFLFLGIGALIFIHVCI---VARTFRAGLIRNNVGGAMVERSSIGSTSMSRDDVE 61
+I +I + + I A IFI + F L RN R S +S V+
Sbjct: 37 FLIGLIMIPVAITAFIFILTSLGFTFFFAFYWFLQRNYRHRLRRHRRHEYSDGLSPRCVK 96
Query: 62 KLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPIC 121
+LP ++Y S +C VC+D F +G CR LP C H FH +CVD WL+ CPIC
Sbjct: 97 RLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPIC 156
Query: 122 RSTANSRRFGEESSRF 137
R RF EE R+
Sbjct: 157 RDRVY--RF-EEGRRW 169
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 60 VEKLPCYEYLA-KSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNC 118
++ LP + Y + SP +C VCL +F DK RLLP C+H+FH +C+D WLL++ C
Sbjct: 105 IDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTC 164
Query: 119 PICRS 123
P+CRS
Sbjct: 165 PLCRS 169
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 55 MSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLT 114
+++ D+E+LP Y + ++ S C VC F R+LP CNH FHA+CVD WL T
Sbjct: 371 LTKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLP-CNHEFHAKCVDKWLKT 429
Query: 115 NPNCPICRSTAN 126
N CPICR+ A+
Sbjct: 430 NRTCPICRADAS 441
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
Query: 2 VMAIIISVIFLFLGIGALIFIHVCIVARTFRAGLIRNNVGGAMVE-RSSIGSTSMSRDDV 60
++AI++ IF+ LG+ + +H CI R +G A + S + ++ +
Sbjct: 51 IIAIVVLAIFISLGMVSCC-LH-CI--------FYREEIGAAGQDVLHSRARRGLEKEVI 100
Query: 61 EKLPCYEY-----LAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTN 115
E P + Y L KG +ECA+CL +F + R +P C+H+FHA C+D WL +
Sbjct: 101 ESFPTFLYSEVKGLKIGKGG--VECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSW 158
Query: 116 PNCPICRSTANSRRFGEESSRFSDIDVE 143
CP+CR AN ES + ++DVE
Sbjct: 159 STCPVCR--ANLSLKPGESYPYLNMDVE 184
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 60 VEKLPCYEYLAKSKGSSPI----------ECAVCLDKFNKGDKCRLLPICNHSFHAQCVD 109
++ LP + Y A + P +CAVCL +F +GD R LP+C H+FH +C+D
Sbjct: 126 IKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECID 185
Query: 110 AWLLTNPNCPICRS 123
WL ++PNCP+CR+
Sbjct: 186 EWLRSHPNCPLCRT 199
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 60 VEKLPCYEYLAKSKGSSPIE--CAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPN 117
++K+P + Y +K+ + C+VCL +F + D+ RLLP C HSFH C+D W +
Sbjct: 86 LDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRST 145
Query: 118 CPICRSTANSR-RFGEESSRFSDIDVEL-REGVPTEGIELSDIRIELSDHVSFESSRPNQ 175
CP+CR+ + E S S + EG E I+L+ I +++S V FE S P
Sbjct: 146 CPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCEREPIDLAGIIVDISREVEFEGSNPGL 205
Query: 176 TDSNPSLLQDS 186
N S S
Sbjct: 206 PIENGSKFPGS 216
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 1 MVMAIIISVIFLFLGIGAL--IFIHVCIVARTFRAGLIRNNVGGAMVERSSIG-STSMSR 57
M + ++++ + LF+ +F+ ++ R F ++ G ++ ++ +T +
Sbjct: 21 MPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATPPENTGLDP 80
Query: 58 DDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPN 117
+ P + Y + +K + ECA+CL +F+ D RL+ +C H FH+ C+D W +
Sbjct: 81 FIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKT 140
Query: 118 CPICR 122
CP+CR
Sbjct: 141 CPVCR 145
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 VMAIIISVIFLFLGIGALIFIHVCIVARTFRAG--LIRNNVGGAMVERSSIGSTSMSRDD 59
V +I+ ++ F+ L + A F H + + T G + + + + RSS S + +
Sbjct: 47 VFSIVFTLTFVLL-VYAKCF-HNDLRSETDSDGERIRHDRLWQGLFNRSSRFS-GLDKKA 103
Query: 60 VEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCP 119
+E LP + + A +EC+VCL KF + RLLP C H+FH C+D WL + CP
Sbjct: 104 IESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCP 163
Query: 120 ICRSTAN 126
+CR+ N
Sbjct: 164 LCRNRVN 170
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 60 VEKLPCYEYLAK-SKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNC 118
++ LP + Y + + P +CAVCL +F DK RLLP C+H+FH C+D WLL++ C
Sbjct: 113 IDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTC 172
Query: 119 PICR 122
P+CR
Sbjct: 173 PLCR 176
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 18/114 (15%)
Query: 43 AMVERSSIGSTSMSRDDVEKLPCYEY-----LAKSKGSSPIECAVCLDKFNKGDKCRLLP 97
A R+S G + +D + P + Y L KG +ECA+CL++F + RL+P
Sbjct: 91 AFTRRTSRG---LGKDVINSFPSFLYSQVKGLKIGKGG--VECAICLNEFEDEETLRLMP 145
Query: 98 ICNHSFHAQCVDAWLLTNPNCPICRSTANSRRFGEESSRF--------SDIDVE 143
C+H+FHA C+D WL + CP+CR++ + +++S + D+D+E
Sbjct: 146 PCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDNQDMDLE 199
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 55 MSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLT 114
+++ D+E+LP Y + S S C VC F R+LP CNH FHA+CVD WL
Sbjct: 273 LTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLKA 331
Query: 115 NPNCPICRSTAN 126
N CPICR+ A+
Sbjct: 332 NRTCPICRADAS 343
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 55 MSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLT 114
+++ D+E+LP Y + S S C VC F R+LP CNH FHA+CVD WL
Sbjct: 330 LTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLKA 388
Query: 115 NPNCPICRSTAN 126
N CPICR+ A+
Sbjct: 389 NRTCPICRADAS 400
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 51 GSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDA 110
+T + + ++++P Y + EC +CL F G+K R+LP CNH FH +C+D
Sbjct: 85 AATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDT 144
Query: 111 WLLTNPNCPICRST 124
WLL+ +CP CR +
Sbjct: 145 WLLSRSSCPTCRQS 158
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 34 GLIRNNVGGAMV-----ERSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFN 88
GL+ +G M+ R + ++++ ++++P ++Y KG CA+CLD++
Sbjct: 182 GLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDY---QKGDQYDVCAICLDEYE 238
Query: 89 KGDKCRLLPICNHSFHAQCVDAWLL-TNPNCPICRSTAN 126
GDK R+LP C H++H++CVD WL T CPIC+ +
Sbjct: 239 DGDKLRVLP-CAHAYHSRCVDPWLTQTRKTCPICKQPVH 276
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 2 VMAIIISVIFLFLGIGALIFIHVCIVARTFRAG------LIRNNVGGAMVERSSIGS--- 52
V+AI+ ++ F+ L ++ C + R+G R G RS+ S
Sbjct: 43 VLAIMFALTFVLL-----VYAKCCHI--DLRSGSGDRRRHDRRLRQGIFFNRSTASSDRF 95
Query: 53 TSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWL 112
+ + + +E LP + + A ++C+VCL KF + RLLP C H+FH C+D WL
Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 113 LTNPNCPICR 122
+ CP+CR
Sbjct: 156 EQHATCPLCR 165
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 37 RNNVGGAMVERSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLL 96
R +V G + R +S D + KLPCY ++ C +CL G+ R L
Sbjct: 139 REDVYGELEARG------LSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSL 192
Query: 97 PICNHSFHAQCVDAWLLTNPNCPICRSTAN 126
P C+H+FH CVD WL+ + +CPICR
Sbjct: 193 PKCDHTFHLVCVDKWLIRHGSCPICRQAVK 222
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 45 VERSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFH 104
+R S ++ ++ + Y+Y + +C+VCL +F + + RLLP CNH+FH
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFH 166
Query: 105 AQCVDAWLLTNPNCPICRS 123
C+D WL ++ NCP+CR+
Sbjct: 167 LPCIDTWLKSHSNCPLCRA 185
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 55 MSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLT 114
+++ D+E+LP Y + S S C VC F R+LP CNH FH +CVD WL
Sbjct: 355 LTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLKA 413
Query: 115 NPNCPICRSTAN 126
N CPICR+ A+
Sbjct: 414 NRTCPICRADAS 425
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 1 MVMAIIISVIFLFLGIGALIFIHVCIVARTFRAGLIRNNVGGAMVERS----SIGSTSMS 56
+++A ++ + LG LI + C+ R AG V G+ + + + +
Sbjct: 32 VILAALLCALICVLG---LIAVSRCVWLRRLAAG--NRTVSGSQTQSPQPPVAAANKGLK 86
Query: 57 RDDVEKLPCYEYLAKSKGSSPI-ECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTN 115
+ ++ LP + +S S ECA+CL +F+ GD+ R+LP C H FH C+D WL ++
Sbjct: 87 KKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSH 146
Query: 116 PNCPICR 122
+CP CR
Sbjct: 147 SSCPSCR 153
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 78 IECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPICRSTANS 127
+ECAVCL GDK R+LP CNH FH C+D W ++ CP+CR+T S
Sbjct: 118 LECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGS 167
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 55 MSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLT 114
+++ D+E+LP Y + + S C VC+ F R+LP CNH FHA+CVD WL
Sbjct: 438 LTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKA 496
Query: 115 NPNCPICRSTAN 126
N CPICR+ A+
Sbjct: 497 NRTCPICRADAS 508
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 57 RDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLL-TN 115
+D ++KLP +++ KG CA+CLD++ GDK R+LP C+H++H +CVD WL T
Sbjct: 220 KDQLKKLPVHKF---KKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTK 275
Query: 116 PNCPICRS 123
CP+C+
Sbjct: 276 KTCPVCKQ 283
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 60 VEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCP 119
+EK+P + Y K+ S EC+VCL +F + D+ R+LP C H FH C+D W + +CP
Sbjct: 93 LEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCP 152
Query: 120 ICRS 123
+CR+
Sbjct: 153 LCRA 156
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 38 NNVGGAMVERSSIGSTSMSRDDVEKLPCYEY---LAKSKGSSPIECAVCLDKFNKGDKCR 94
N GG V S + + +D +E P + Y A G+ +ECA+CL +F + R
Sbjct: 76 NETGGHEVLHSRV-RRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLR 134
Query: 95 LLPICNHSFHAQCVDAWLLTNPNCPICRS 123
+P C+H+FHA C+D WL + CP+CR+
Sbjct: 135 WMPPCSHTFHANCIDEWLSSRSTCPVCRA 163
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 46 ERSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHA 105
R + ++++ ++++P ++Y KG CA+CLD++ GDK R+LP C H++H+
Sbjct: 199 HRKRLQRNRLTKEQLKQIPTHDY---QKGDEYDVCAICLDEYEDGDKLRILP-CAHAYHS 254
Query: 106 QCVDAWLL-TNPNCPICRSTAN 126
+CVD WL T CPIC+ +
Sbjct: 255 RCVDPWLTQTRKTCPICKQPVH 276
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 57 RDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLL-TN 115
+D ++KLP +++ KG CA+CLD++ GDK R+LP C+H++H +CVD WL T
Sbjct: 220 KDQLKKLPVHKF---KKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTK 275
Query: 116 PNCPICRS 123
CP+C+
Sbjct: 276 KTCPVCKQ 283
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 57 RDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLL-TN 115
+D ++KLP +++ KG CA+CLD++ GDK R+LP C+H++H +CVD WL T
Sbjct: 220 KDQLKKLPVHKF---KKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTK 275
Query: 116 PNCPICRS 123
CP+C+
Sbjct: 276 KTCPVCKQ 283
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 57 RDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLL-TN 115
+D ++KLP +++ KG CA+CLD++ GDK R+LP C+H++H +CVD WL T
Sbjct: 220 KDQLKKLPVHKF---KKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTK 275
Query: 116 PNCPICRS 123
CP+C+
Sbjct: 276 KTCPVCKQ 283
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 55 MSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLT 114
+++ D+E+LP Y + + S C VC+ F R+LP CNH FHA+CVD WL
Sbjct: 441 LTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKG 499
Query: 115 NPNCPICRSTAN 126
N CPICR+ A+
Sbjct: 500 NRTCPICRADAS 511
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 78 IECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPICRSTANSRRFGEESSRF 137
+EC VCL + GDK R+LP C+H FH +C+D+WL +N CPICR +R + SR
Sbjct: 86 LECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICR-----KRVCLKQSR- 139
Query: 138 SDIDVELREGVPTEGIELSDIRIELSDHVSFESSRPNQTDS 178
R + + + S+H F + P TD+
Sbjct: 140 ------TRPELGGRDKSFNQNHDQTSEHHEFSTDPPTNTDT 174
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 78 IECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPICRS 123
+C+VCL +F+ G+ RLLP C+H+FH QC+D WL ++ NCP+CR+
Sbjct: 155 TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRA 200
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 74 GSSPIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPICRSTANSRRFGEE 133
+S ECAVCL + DK R LP C H FH CVD WL T CP+CR+ R
Sbjct: 102 AASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPR----- 156
Query: 134 SSRFSDIDVELREG-VPTEGIELSDIRIELSDHVSFESSRPNQTDSNPS 181
++ E REG V T L + R+ L+ + SS N+T +P+
Sbjct: 157 ----PRLEPEPREGPVGTAPQLLVETRLNLTVEAASSSSSDNKTVVSPA 201
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 46 ERSSIGSTSMSRDDVEKLPCYEYLAKSKGSSPIECAVCLDKFNKGDKCRLLPICNHSFHA 105
R + ++++ ++++P ++Y KG CA+CLD++ GDK R+LP C H++H+
Sbjct: 199 HRKRLQRNRLTKEQLKQIPTHDY---QKGDEYDVCAICLDEYEDGDKLRVLP-CAHAYHS 254
Query: 106 QCVDAWLL-TNPNCPICRSTAN 126
+CVD WL T CPIC+ +
Sbjct: 255 RCVDPWLTQTRKTCPICKQPVH 276
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 78 IECAVCLDKFNKGDKCRLLPICNHSFHAQCVDAWLLTNPNCPICRST 124
+ECAVCL + G++ R LP C H FHA+CVD WL ++ CP+CR T
Sbjct: 132 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLT 178
>sp|Q9ZV51|ATL56_ARATH RING-H2 finger protein ATL56 OS=Arabidopsis thaliana GN=ATL56 PE=2
SV=1
Length = 181
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 52 STSMSRDDVEKLPCYEYLAKSKGSS-PIECAVCLDKFNKGDKCRLLPICNHSFHAQCVDA 110
S +S V+KLP +++ S + +C VC D F +G CR LP C H FH +CVD
Sbjct: 81 SDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDT 140
Query: 111 WLLTNPNCPICRS 123
WLL CPICR+
Sbjct: 141 WLLKASTCPICRA 153
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 1 MVMAIIISVIFLFLGIGALIFIHVC--------IVARTFRAGLIRNNVGGAMVERSSIGS 52
+ +A+I + FL + +F+ C I+ R + RN+ MV + S
Sbjct: 37 LAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPELRS 96
Query: 53 TSMSRDDVEKLPCYEYLAKSKGSSPI--------------ECAVCLDKFNKGDKCRLLPI 98
+ + +P +++ + + + EC+VCL +F +K R++P
Sbjct: 97 RGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 156
Query: 99 CNHSFHAQCVDAWLLTNPNCPICRS 123
C+H FH C+D WL N NCP+CR+
Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRT 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,933,840
Number of Sequences: 539616
Number of extensions: 2716521
Number of successful extensions: 7300
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 6771
Number of HSP's gapped (non-prelim): 566
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)