BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040084
(127 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255556207|ref|XP_002519138.1| hypothetical protein RCOM_0939100 [Ricinus communis]
gi|223541801|gb|EEF43349.1| hypothetical protein RCOM_0939100 [Ricinus communis]
Length = 545
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 4 PSSP-EIPPR-FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
P SP E P R F K +LPS L D K RIP K VR F +ELSDVA+ PN +W+V L+K
Sbjct: 18 PHSPAEKPLRHFFKIILPSNLNDMKLRIPTKFVRNFGNELSDVANFITPNCRLWKVGLRK 77
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTN 121
+WFDDGW DFV+ +S +G L++F Y S F I+D +ACEI YP N++ +
Sbjct: 78 VHNDIWFDDGWHDFVKHHSICIGYLLVFGYRGFSDFSVFIFDVSACEIEYP-CNDQGLVH 136
Query: 122 GEESH 126
GE+
Sbjct: 137 GEKCR 141
>gi|255637330|gb|ACU18995.1| unknown [Glycine max]
Length = 437
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 73/104 (70%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K VLP+TL+ ++ RIP+ +RK+ +LS +A +T+P+G VW + LKK ++WF D
Sbjct: 4 PCFDKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLTVPDGSVWPIGLKKADNRIWFVD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
GWQDFV+ YS VG ++F YE NS+F HI++ + E+NY S+
Sbjct: 64 GWQDFVQRYSIGVGYFLVFMYEGNSSFIVHIFNLSTSEVNYQSA 107
>gi|356521114|ref|XP_003529203.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 437
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 73/104 (70%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K VLP+TL+ ++ RIP+ +RK+ +LS +A +T+P+G VW + LKK ++WF D
Sbjct: 4 PCFDKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLTVPDGSVWPIGLKKADNRIWFVD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
GWQDFV+ YS VG ++F YE NS+F HI++ + E+NY S+
Sbjct: 64 GWQDFVQRYSIGVGYFLVFMYEGNSSFIVHIFNLSTSEVNYQSA 107
>gi|224123406|ref|XP_002330307.1| predicted protein [Populus trichocarpa]
gi|222871342|gb|EEF08473.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 65/99 (65%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K + STL+D+K RIPNK RKF ELSDVA + +PNG+ WQ+ L K V FDDGW
Sbjct: 23 FFKIITQSTLKDKKLRIPNKFARKFGEELSDVAKVVLPNGHSWQIGLTKSNNSVSFDDGW 82
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
F+E +S G L++F Y S F A I+D+TACEI Y
Sbjct: 83 LQFLEQHSVGYGHLLVFGYRGCSNFNALIFDKTACEIPY 121
>gi|357490715|ref|XP_003615645.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355516980|gb|AES98603.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
Length = 274
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%), Gaps = 3/120 (2%)
Query: 5 SSPEIPPR-FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG 63
SSPE + F+KA+LPS + ++ RIP++ + +F +EL++VA IT+P+G VW+++LKK G
Sbjct: 12 SSPEKESKHFMKAILPSPIHSKQIRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRG 71
Query: 64 RKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGE 123
V+F + WQ+FVE YS G + F+YE NS F I+D T+ EI+YP E TNGE
Sbjct: 72 ENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSKFSVIIFDATSVEISYPF--ETPSTNGE 129
>gi|357455499|ref|XP_003598030.1| B3 domain-containing protein [Medicago truncatula]
gi|357455503|ref|XP_003598032.1| B3 domain-containing protein [Medicago truncatula]
gi|355487078|gb|AES68281.1| B3 domain-containing protein [Medicago truncatula]
gi|355487080|gb|AES68283.1| B3 domain-containing protein [Medicago truncatula]
Length = 266
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F+KA+LPS + D K RIP++ +++F +EL +VA IT+P+G W++KLKK G V+F + W
Sbjct: 21 FMKAILPSAIHDTKLRIPDEFIKRFGNELKNVATITVPDGCDWEMKLKKCGNDVYFCNKW 80
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGE 123
Q F E YS GS + F+YE +S F I+D T+ EI YP + TNGE
Sbjct: 81 QQFAEYYSIGYGSFLCFKYEGDSKFSVFIFDATSIEICYPFKTQS--TNGE 129
>gi|356575102|ref|XP_003555681.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 435
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 73/104 (70%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K VLP+TL+ ++ RIP+ +RK+ +LS +A +T+P+G VW++ LKK ++ F D
Sbjct: 4 PCFHKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLTVPDGSVWRIGLKKADNRILFVD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
GWQDFV+ YS VG ++F YE NS+F HI++ + E+NY S+
Sbjct: 64 GWQDFVQHYSIGVGYFLVFMYEGNSSFIVHIFNLSTSEVNYQSA 107
>gi|449471266|ref|XP_004153259.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
gi|449502391|ref|XP_004161627.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 412
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K VL ST++ +K RIP VR ELS VA +T+P+G+VW+V L+K K WF+D
Sbjct: 19 PHFHKLVLTSTIQARKLRIPETFVRMIRDELSAVATLTVPDGHVWRVGLRKADNKFWFED 78
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
GWQ F+E YS VG L++F YE NS+F I++ EINY S+
Sbjct: 79 GWQGFLEHYSIRVGYLLVFRYEGNSSFCVFIFNLNTSEINYQSA 122
>gi|297834810|ref|XP_002885287.1| hypothetical protein ARALYDRAFT_479415 [Arabidopsis lyrata subsp.
lyrata]
gi|297331127|gb|EFH61546.1| hypothetical protein ARALYDRAFT_479415 [Arabidopsis lyrata subsp.
lyrata]
Length = 341
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 72/105 (68%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K + ST+++++ R+P+K V KF ELS +T+P+G+VW+V L+K K+WF D
Sbjct: 4 PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GWQ+FV+ YS +G L++F YE NS F +I++ + EINY S+
Sbjct: 64 GWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTG 108
>gi|30685150|ref|NP_188529.2| B3 domain-containing transcription factor VRN1 [Arabidopsis
thaliana]
gi|75153628|sp|Q8L3W1.1|VRN1_ARATH RecName: Full=B3 domain-containing transcription factor VRN1;
AltName: Full=Protein VERNALIZATION 1
gi|21734794|gb|AAM76972.1|AF289051_1 reduced vernalization response 1 [Arabidopsis thaliana]
gi|21734796|gb|AAM76973.1|AF289052_1 reduced vernalization response 1 [Arabidopsis thaliana]
gi|89000959|gb|ABD59069.1| At3g18990 [Arabidopsis thaliana]
gi|110741272|dbj|BAF02186.1| hypothetical protein [Arabidopsis thaliana]
gi|225898655|dbj|BAH30458.1| hypothetical protein [Arabidopsis thaliana]
gi|332642657|gb|AEE76178.1| B3 domain-containing transcription factor VRN1 [Arabidopsis
thaliana]
Length = 341
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 72/105 (68%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K + ST+++++ R+P+K V KF ELS +T+P+G+VW+V L+K K+WF D
Sbjct: 4 PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GWQ+FV+ YS +G L++F YE NS F +I++ + EINY S+
Sbjct: 64 GWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTG 108
>gi|312282979|dbj|BAJ34355.1| unnamed protein product [Thellungiella halophila]
Length = 341
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 72/105 (68%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K + ST+++++ R+P+K V KF ELS +T+P+G+VW+V L+K K+WF D
Sbjct: 4 PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKAENKIWFQD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GWQ+FV+ YS +G L++F YE NS F +I++ + EINY S+
Sbjct: 64 GWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTG 108
>gi|297741372|emb|CBI32503.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
S P F K ++ S L+ ++ RIP K V+K +LS V +T+PNG VW V L K
Sbjct: 17 SQPTRSLLFYKLIVSSVLQAKRLRIPQKFVKKSGDQLSAVTTLTLPNGGVWYVGLTKADN 76
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
K WF GW +FVE YS VG ++F YE NS F +I+D TA EINYPS+N N E+
Sbjct: 77 KFWFYHGWHEFVEYYSIHVGYFLIFRYEGNSNFNVNIFDLTASEINYPSNNLR---NSEK 133
Query: 125 SHH 127
+ H
Sbjct: 134 TSH 136
>gi|225428645|ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Vitis vinifera]
Length = 407
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
S P F K ++ S L+ ++ RIP K V+K +LS V +T+PNG VW V L K
Sbjct: 17 SQPTRSLLFYKLIVSSVLQAKRLRIPQKFVKKSGDQLSAVTTLTLPNGGVWYVGLTKADN 76
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
K WF GW +FVE YS VG ++F YE NS F +I+D TA EINYPS+N N E+
Sbjct: 77 KFWFYHGWHEFVEYYSIHVGYFLIFRYEGNSNFNVNIFDLTASEINYPSNNLR---NSEK 133
Query: 125 SHH 127
+ H
Sbjct: 134 TSH 136
>gi|255556211|ref|XP_002519140.1| sulfotransferase, putative [Ricinus communis]
gi|223541803|gb|EEF43351.1| sulfotransferase, putative [Ricinus communis]
Length = 591
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 67/102 (65%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K ++ S L D+K RIP K V+K+ ELS +A +T+PNG +W V+L+K +K+WF GW
Sbjct: 21 FYKLIVASILHDKKLRIPEKFVKKYRDELSCIATLTVPNGRIWVVELEKVNKKLWFCSGW 80
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
+FVE YS VG ++F YE S F+ I+D T EI YP +
Sbjct: 81 HEFVEYYSIRVGYFLVFRYEGESNFRVCIFDLTVSEIRYPGN 122
>gi|224123422|ref|XP_002330311.1| predicted protein [Populus trichocarpa]
gi|222871346|gb|EEF08477.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K +LP T+R+++ RIP+ V+KF H+L A + +P G+V ++ L K K+WF D
Sbjct: 4 PFFQKLILPGTIREKRLRIPDNFVKKFGHDLLGFARLIVPGGHVSRIGLIKADEKLWFHD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
GWQ FVE ++ +G ++F+YE N+ F HI++ EINY S+
Sbjct: 64 GWQQFVERFAIHIGYFLIFQYEGNAIFNVHIFNLPTSEINYHSN 107
>gi|449455216|ref|XP_004145349.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 415
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 11 PRFVKAVLPST---LRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P F K VL ST ++ +K RIP VR ELS VA +T+P+G+VW+V L+K K W
Sbjct: 19 PHFHKLVLTSTTSTIQARKLRIPETFVRMIRDELSAVATLTVPDGHVWRVGLRKADNKFW 78
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
F+DGWQ F+E YS VG L++F YE NS+F I++ EINY S+
Sbjct: 79 FEDGWQGFLEHYSIRVGYLLVFRYEGNSSFCVFIFNLNTSEINYQSA 125
>gi|33943517|gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa subsp. campestris]
Length = 329
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK--EGRKVWF 68
P F K + ST+++++ R+P+K V KF ELS +T+P+G+VW+V L+K K+WF
Sbjct: 4 PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWF 63
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS---NEESHTN 121
DGWQ+FV+ YS +G L++F YE NS F IY+ EINY S+ + SH N
Sbjct: 64 QDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVCIYNLPQSEINYHSTGLMDSASHNN 119
>gi|255556221|ref|XP_002519145.1| DNA binding protein, putative [Ricinus communis]
gi|223541808|gb|EEF43356.1| DNA binding protein, putative [Ricinus communis]
Length = 333
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 70/105 (66%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K +L ++++D+K RIP+ V+KF ++LS +++P G VW V L K K WF +
Sbjct: 4 PYFHKLILSNSIKDKKLRIPDNFVKKFGNDLSAFGRLSVPGGPVWPVGLIKADDKFWFRE 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GWQ+F+E YS VG ++F YE +S F HI++ +A EINY S+N
Sbjct: 64 GWQEFMERYSIRVGYFLVFRYEGHSVFTVHIFNLSASEINYQSNN 108
>gi|357455501|ref|XP_003598031.1| B3 domain-containing protein [Medicago truncatula]
gi|355487079|gb|AES68282.1| B3 domain-containing protein [Medicago truncatula]
Length = 265
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 2 ISPSSPEIPPR-FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLK 60
+ P +PE + F+KA+LPS + D + RIP+ +++F +EL +VA IT+P+G W+++LK
Sbjct: 9 VRPPAPEKDSKHFMKAILPSPIHDTQIRIPDGFIKRFGNELKNVATITVPDGCDWEMELK 68
Query: 61 KEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP----SSNE 116
K G V+F + WQ F E YS GS + F+YE +S F I+D T+ EI YP S N
Sbjct: 69 KCGNDVYFCNKWQQFAEYYSIGYGSFLRFKYEGDSKFNVVIFDVTSVEICYPFKTQSING 128
Query: 117 ESHT 120
E++T
Sbjct: 129 ETNT 132
>gi|356545379|ref|XP_003541121.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 436
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 11 PRFVKAVLPSTLR-DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K +LPST++ +Q+ R+P+ +RK+ EL + +++P+G VW+V LKK K WF
Sbjct: 4 PSFHKLLLPSTVQPNQQLRLPDNFMRKYGGELLPIVTLSVPDGSVWRVGLKKADNKYWFL 63
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESH 119
DGW++FV+ YS +G L++F+YE S+F HI++ EINY S+ S+
Sbjct: 64 DGWKEFVKHYSISIGYLLVFKYEGKSSFSVHIFNLATSEINYQSATRSSN 113
>gi|15234250|ref|NP_192068.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
gi|75338967|sp|Q9ZSH7.1|Y4158_ARATH RecName: Full=B3 domain-containing protein At4g01580
gi|3859591|gb|AAC72857.1| T15B16.18 gene product [Arabidopsis thaliana]
gi|7268201|emb|CAB77728.1| hypothetical protein [Arabidopsis thaliana]
gi|37202022|gb|AAQ89626.1| At4g01580 [Arabidopsis thaliana]
gi|51968808|dbj|BAD43096.1| hypothetical protein [Arabidopsis thaliana]
gi|332656645|gb|AEE82045.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
Length = 190
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 3 SPSSPEIP-PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
S PE P +F K VLPST++D+ RIP + V+ +LS+V + P GY +KLK+
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKR 78
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
G ++WF +GW +F EA+S G +LFEY+ NS+F+ I++ +ACE NYP
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129
>gi|40806799|gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]
Length = 329
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK--EGRKVWF 68
P F K + ST+++++ R+P+K V +F ELS +T+P+G+VW+V L+K K+WF
Sbjct: 4 PFFHKLIFSSTIQEKRLRVPDKFVSRFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWF 63
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS---NEESHTN 121
DGWQ+FV+ YS +G L++F YE NS F IY+ EINY S+ + SH N
Sbjct: 64 QDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVCIYNLPQSEINYHSTGLMDSASHNN 119
>gi|356507708|ref|XP_003522606.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 280
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F+K +LPS + + RIP + +++F ELS+VA +T+P+G VW+++LKK G+ V F W
Sbjct: 26 FLKIILPSPIHANQMRIPEEFIKRFGDELSNVATVTVPDGRVWKMRLKKCGKDVSFRSKW 85
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
++FVE YS GS ++F YE NS F+ I+D T+ EI YP
Sbjct: 86 REFVEYYSLGYGSYLVFRYEGNSKFRVLIFDTTSAEICYP 125
>gi|224105493|ref|XP_002313830.1| predicted protein [Populus trichocarpa]
gi|222850238|gb|EEE87785.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K +L ST+R+++ RIP+ V+KF H++S + +P G+V ++ L K K+WF D
Sbjct: 4 PFFQKLILSSTIREKRLRIPDNFVKKFGHDISSFVRLIVPGGHVSRIGLIKADDKLWFHD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
GWQ FVE ++ VG ++F YE N+ F HI++ EINY S+
Sbjct: 64 GWQQFVERFAIHVGYFLIFRYEGNAIFNVHIFNLPTSEINYHSN 107
>gi|147816543|emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]
Length = 749
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K + + LRD IP + V ++ LS++ + +P+G VWQV LK+ +VW D
Sbjct: 23 PHFFKIIHSTILRDGTLGIPKRFVSRYGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDG 82
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GW++FVE YS G ++F YE NS F I+D TA EI YPS+N
Sbjct: 83 GWREFVEYYSIGYGHFLVFRYEGNSIFHXLIFDXTASEIEYPSTN 127
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 30/50 (60%)
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
+ GWQ+F E YS G L+LF YE S F I+D TA EI YPSSN
Sbjct: 418 ILLKGGWQEFCEFYSIGYGHLLLFRYEGXSHFHVLIFDMTASEIEYPSSN 467
>gi|356538855|ref|XP_003537916.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 431
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 11 PRFVKAVLPSTLR-DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K +LPST++ +Q+ R+P+ +RK+ ELS + +++P+G VW V LKK K F
Sbjct: 4 PSFHKLLLPSTVQPNQQLRLPDNFMRKYGGELSPIVTLSVPDGSVWHVGLKKADNKYCFL 63
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP----SSNEESH 119
DGW++FV+ YS VG L++F YE S+F HI++ EINY SSNE H
Sbjct: 64 DGWKEFVQRYSIGVGYLLVFRYEGKSSFNVHIFNLATSEINYQSVTRSSNEGLH 117
>gi|449458391|ref|XP_004146931.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
[Cucumis sativus]
Length = 346
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 69/111 (62%)
Query: 2 ISPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
+ P +F K +LPS++R++K ++P+K +R F ELS + +PNG VW+V L+K
Sbjct: 21 LEPEETNSSLQFFKIILPSSVREEKLKMPSKFIRMFGKELSSSVVLIVPNGGVWEVGLEK 80
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
++WF+ W F++ YS G L++F+YE NS+F I+D T EI YP
Sbjct: 81 FNGQIWFNHSWNKFIDYYSIDYGFLLIFKYEGNSSFHVLIFDTTTFEIQYP 131
>gi|449455214|ref|XP_004145348.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
gi|449471263|ref|XP_004153258.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 417
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 65/94 (69%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K V+PS L+D+K +IPNK +KF ++ D+ + PNGY W ++LK+ GR +WF+DGW
Sbjct: 32 FYKLVVPSILQDKKLKIPNKFAKKFGGDILDLVTLVAPNGYRWVLELKRHGRSMWFEDGW 91
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA 106
+FV+ + VG L++F +E NS F ++++ TA
Sbjct: 92 HEFVKHHCIQVGQLLVFRFEGNSVFNFYMFNLTA 125
>gi|224109350|ref|XP_002315168.1| predicted protein [Populus trichocarpa]
gi|222864208|gb|EEF01339.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 55/84 (65%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIP K V KF LSD+A + +PNG WQV + KE +WFD+GWQ+FVE +S G LV
Sbjct: 3 RIPRKFVEKFGEGLSDIAKVAVPNGNEWQVGITKEHNNIWFDEGWQEFVEHHSIGSGYLV 62
Query: 88 LFEYESNSTFQAHIYDETACEINY 111
+F Y +S F I+D TACEI Y
Sbjct: 63 VFRYRGDSNFSVLIFDMTACEIQY 86
>gi|357473115|ref|XP_003606842.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355507897|gb|AES89039.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
Length = 429
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K VLPSTL+ ++ R+P+ +RK+ ++S +T+P+G VW+V +KK K WF D
Sbjct: 4 PSFHKLVLPSTLQAKQLRLPDDFMRKYGGDISPTVTLTVPDGSVWRVIMKKVDNKFWFLD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESH 119
GW +FV+ YS G L++F+YE S F +I+ EINY S + S+
Sbjct: 64 GWNEFVQNYSISTGYLLVFKYEGKSHFTVNIFSLPTSEINYQSPAQRSN 112
>gi|217071914|gb|ACJ84317.1| unknown [Medicago truncatula]
Length = 324
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K VLPSTL+ ++ R+P+ +RK+ ++S +T+P+G VW+V +KK K WF D
Sbjct: 4 PSFHKLVLPSTLQAKQLRLPDDFMRKYGGDISPTVTLTVPDGSVWRVIMKKVDNKFWFLD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESH 119
GW +FV+ YS G L++F+YE S F +I+ EINY S + S+
Sbjct: 64 GWNEFVQNYSISTGYLLVFKYEGKSHFTVNIFSLPTSEINYQSPAQRSN 112
>gi|30685143|ref|NP_188526.2| AP2/B3 domain-containing transcription factor [Arabidopsis
thaliana]
gi|75328030|sp|Q84R27.1|Y3896_ARATH RecName: Full=B3 domain-containing protein At3g18960
gi|29824327|gb|AAP04124.1| unknown protein [Arabidopsis thaliana]
gi|30793831|gb|AAP40368.1| unknown protein [Arabidopsis thaliana]
gi|110739215|dbj|BAF01522.1| hypothetical protein [Arabidopsis thaliana]
gi|332642653|gb|AEE76174.1| AP2/B3 domain-containing transcription factor [Arabidopsis
thaliana]
Length = 209
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 3 SPSSPEIP-PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
S PE P +F K VLPST++D+ +IP + V+ +LS+V + P G+ +KLK+
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKR 78
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
G ++WF +GW +F EA+S G +LFEY+ NS+F+ I++ +ACE YP
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129
>gi|9280313|dbj|BAB01692.1| unnamed protein product [Arabidopsis thaliana]
Length = 193
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 3 SPSSPEIP-PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
S PE P +F K VLPST++D+ +IP + V+ +LS+V + P G+ +KLK+
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKR 78
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
G ++WF +GW +F EA+S G +LFEY+ NS+F+ I++ +ACE YP
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129
>gi|357455497|ref|XP_003598029.1| B3 domain-containing protein [Medicago truncatula]
gi|355487077|gb|AES68280.1| B3 domain-containing protein [Medicago truncatula]
Length = 534
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F+KA+LP ++ RIP++ + +F +EL +VA IT+P+ W ++LKK G +++F + W
Sbjct: 25 FMKAILPPPDHTKEIRIPDEFITRFGNELDNVATITVPDALEWDMELKKCGGQIFFCNNW 84
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGE 123
Q F E YS + G + F+YE NS F IYD T+ EI+YP + TNGE
Sbjct: 85 QQFAEYYSIYYGCYLDFKYEGNSKFNVVIYDTTSVEISYPF--QTRRTNGE 133
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF-DDG 71
F KA+LPS + D++ RIP + F +EL +VA +T+P+G W++ LKK G V+F +
Sbjct: 262 FKKAILPSPIYDKEIRIPENFITMFGNELENVATVTVPDGCDWEMDLKKCGEDVYFCNKE 321
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
WQ F E YS G + F YE NS F I+D T+ EI YP
Sbjct: 322 WQQFAEYYSLRYGCFLSFRYEGNSNFSVIIFDATSVEICYP 362
>gi|224123414|ref|XP_002330309.1| predicted protein [Populus trichocarpa]
gi|222871344|gb|EEF08475.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K ++ S L+D+K +IP K V K+ ELS VA +T+P G + V+L+K K+WF GW
Sbjct: 2 FYKLMVASILQDKKLKIPKKFVNKYGDELSSVATLTVPCGRICLVELQKVNGKLWFHKGW 61
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN-----EESHTN 121
+FVE YS VG ++F YE S F H++D T EI P ++ E SH N
Sbjct: 62 HEFVECYSIRVGYFLVFIYEGKSNFNVHMFDLTVSEIKNPCNSLSQLQESSHDN 115
>gi|147855058|emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
Length = 563
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K V+K +LS V +T+PNG VW V L K K WF GW +FVE YS VG ++
Sbjct: 197 IPQKFVKKSGDQLSAVTTLTLPNGGVWYVGLTKADNKFWFYHGWHEFVEYYSIHVGYFLI 256
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESHH 127
F YE NS F +I+D TA EINYPS+N N E++ H
Sbjct: 257 FRYEGNSNFNXNIFDLTASEINYPSNNLR---NSEKTSH 292
>gi|357455505|ref|XP_003598033.1| B3 domain-containing protein [Medicago truncatula]
gi|355487081|gb|AES68284.1| B3 domain-containing protein [Medicago truncatula]
Length = 1203
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F KA+LPS + D++ RIP + + EL +VA IT+P+G W+++LKK G V+F + W
Sbjct: 821 FKKAILPSPIHDKEIRIPEVFITIYGSELKNVATITVPDGLTWKLELKKRGEDVYFCNKW 880
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY----PSSNEESHT 120
+ F E YS G + F+YE NS F I+D T+ EI Y PS+N E++T
Sbjct: 881 KQFAEYYSLRYGCFMSFKYEGNSKFSVIIFDVTSVEICYPLKTPSTNGETNT 932
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIP++ + +F +EL +VA IT+P+G W ++LKK G +++F + WQ F E Y + G +
Sbjct: 606 RIPDEFITRFGNELDNVATITVPDGREWNMELKKCGGQIFFCNNWQQFAEYYCIYYGCYL 665
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHTNGE 123
F+YE NS F IYD T+ EI+YP + TNGE
Sbjct: 666 DFKYEGNSKFNVVIYDRTSVEISYPF--QTRRTNGE 699
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
Query: 1 PISPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLK 60
P E+ P F ST + + RIP+ +++F +EL +VA IT+P+G W+++LK
Sbjct: 952 PSEDEGTELNPSFT-----STYKYRTLRIPDGFIKRFGNELKNVATITVPDGCDWEMELK 1006
Query: 61 KEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP----SSNE 116
K G V+F + WQ F E YS GS + F+YE +S F I+D T+ EI YP S N
Sbjct: 1007 KCGNDVYFCNKWQQFAEYYSIGYGSFLRFKYEGDSKFNVVIFDVTSVEICYPFKTQSING 1066
Query: 117 ESHT 120
E++T
Sbjct: 1067 ETNT 1070
>gi|224129520|ref|XP_002328737.1| predicted protein [Populus trichocarpa]
gi|222839035|gb|EEE77386.1| predicted protein [Populus trichocarpa]
Length = 558
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
PP F K +L +LR+ K +P K V ++ +L+++A + + G W+++LK+ KVW
Sbjct: 15 PPHFFKVILEDSLREGKLMLPQKFVTRYGMDLTNLARLKVL-GEAWEIELKRCDGKVWLQ 73
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGE 123
GW++F E YS G ++FEYE N F I+D +A EI+YP N S G
Sbjct: 74 KGWKEFAEYYSVACGHFLVFEYERNCDFHVLIFDNSATEIDYPLKNNRSEVPGR 127
>gi|357455489|ref|XP_003598025.1| B3 domain-containing protein [Medicago truncatula]
gi|355487073|gb|AES68276.1| B3 domain-containing protein [Medicago truncatula]
Length = 523
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNG-YVWQVKLKK 61
SP+ + F+KA+LP ++ RIPN+ +++F +EL +VA IT+P+G + W++ LKK
Sbjct: 11 SPAPEKASKHFMKAILPPPDHTKEIRIPNEFIKRFGNELKNVATITVPDGRHEWEMGLKK 70
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY----PSSNEE 117
G V+ + WQ F E Y + G + F Y+ NS F IYD T+ EI+Y PS+N +
Sbjct: 71 CGEHVFLSNNWQQFAEYYCIYYGCYLDFNYQGNSKFNVVIYDTTSVEISYSFKTPSTNGD 130
Query: 118 SHTNGEES 125
G S
Sbjct: 131 QRIKGPNS 138
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 63/100 (63%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F KA+LPS + D++ RIP + F +EL VA +T+P+G W+++LKK G ++F + W
Sbjct: 270 FKKAILPSPIHDKEIRIPEDFITMFGNELEKVATVTVPDGRDWKMRLKKRGNDIFFSNEW 329
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
++F + YS G + F+YE NS F I+D T EI YP
Sbjct: 330 EEFAKYYSLGYGCYLSFKYEGNSKFSVIIFDVTYVEICYP 369
>gi|359480431|ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11g0197600-like [Vitis
vinifera]
Length = 598
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 20 STLRDQKPR-IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEA 78
+ +RD + R IP + V ++ LS++ + +P+G VWQV LK+ +VW D GW++FVE
Sbjct: 196 TLVRDPEGRGIPKRFVSRYGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDGGWREFVEY 255
Query: 79 YSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
YS G ++F YE NS F I+D TA EI YPS+N
Sbjct: 256 YSIGYGHFLVFRYEGNSIFHILIFDMTASEIEYPSTN 292
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 6 SPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
P P F K ++ K RIP ++KF + A + G W V +K+E
Sbjct: 4 GPRRNPSFFKVLIGDFT--NKLRIPPAFMKKFRRMTFNNAVLKTVTGESWMVSVKQEDSC 61
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+F GW+ FV+ G ++F + +STFQ +YD++ CE
Sbjct: 62 YFFKKGWRKFVKDQHLEAGDFLVFWFLGDSTFQVVVYDKSGCE 104
>gi|124359883|gb|ABN06173.1| Transcriptional factor B3 [Medicago truncatula]
Length = 222
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 8 EIPP-RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKV 66
E PP F K + +L K IP K V K+ LS+ ++ PNG W++ L K K+
Sbjct: 4 EFPPTHFFKIICDQSLHQGKLIIPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLVKSDGKI 63
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEES 118
WF+ GW++FV+ +S G L+LF+Y S F HI+D++A EI YPS ES
Sbjct: 64 WFEKGWKEFVKYHSLSQGHLLLFKYGRTSHFHVHIFDKSALEIKYPSQRVES 115
>gi|357504775|ref|XP_003622676.1| B3 domain-containing protein [Medicago truncatula]
gi|355497691|gb|AES78894.1| B3 domain-containing protein [Medicago truncatula]
Length = 375
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K + +L K IP K V K+ LS+ ++ PNG W++ L K K+WF+
Sbjct: 7 PTHFFKIICDQSLHQGKLIIPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLVKSDGKIWFE 66
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEES 118
GW++FV+ +S G L+LF+Y S F HI+D++A EI YPS ES
Sbjct: 67 KGWKEFVKYHSLSQGHLLLFKYGRTSHFHVHIFDKSALEIKYPSQRVES 115
>gi|357504753|ref|XP_003622665.1| B3 domain-containing protein [Medicago truncatula]
gi|355497680|gb|AES78883.1| B3 domain-containing protein [Medicago truncatula]
Length = 315
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 7 PEI-PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
PE+ P F K +L L + K +P K V K+ L + PNG W++ L K K
Sbjct: 6 PEVRPTHFFKIILAQNLHEGKLMMPRKFVEKYGKSLPKETCLKTPNGGKWKLNLVKSDGK 65
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHT 120
+WF+ GW+ F E +S G L+LF YE S F+ HI++++A E NYPS E+ T
Sbjct: 66 IWFEKGWKQFAEHHSLAHGHLLLFRYEKTSNFEVHIFEKSALETNYPSKRVEAKT 120
>gi|297745690|emb|CBI40975.3| unnamed protein product [Vitis vinifera]
Length = 399
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V ++ LS++ + +P+G VWQV LK+ +VW D GW++FVE YS G ++
Sbjct: 34 IPKRFVSRYGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDGGWREFVEYYSIGYGHFLV 93
Query: 89 FEYESNSTFQAHIYDETACEINYPSSN 115
F YE NS F I+D TA EI YPS+N
Sbjct: 94 FRYEGNSIFHILIFDMTASEIEYPSTN 120
>gi|357504755|ref|XP_003622666.1| B3 domain-containing protein [Medicago truncatula]
gi|355497681|gb|AES78884.1| B3 domain-containing protein [Medicago truncatula]
Length = 330
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 7 PEI-PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
PE+ F K +L L + K +P K V K+ LS ++ PNG W++ L K K
Sbjct: 6 PEVRSTHFFKIILAQNLHEGKLMMPRKFVEKYGEGLSKAIYLKTPNGAKWKLNLVKSDGK 65
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTN 121
+WF+ GW++F + +S G L+LF+Y+ NS F HI++++A EINYP + TN
Sbjct: 66 IWFEKGWKEFAKHHSLAHGHLLLFKYKRNSHFLVHIFEKSAFEINYPFQRVAAKTN 121
>gi|147855057|emb|CAN82368.1| hypothetical protein VITISV_027619 [Vitis vinifera]
Length = 641
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG-RKVWF 68
P F K VLPS D K +IP K V F EL+ A +T P G VW V+L+K W
Sbjct: 10 PYHFFKIVLPSNANDTKLKIPPKFVNIFRDELTASATLTTPMGQVWPVRLEKASDNSCWI 69
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNG 122
DGWQ+F E +S G ++F YE S F+ ++D TACEI YP ++ H G
Sbjct: 70 CDGWQEFAEHHSIGCGYFLVFGYEGVSNFRVSVFDLTACEIRYPC--QQIHRRG 121
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG-RKVWFDDGWQDFVEAYSTFVGSL 86
+IP K V F EL+ A +T P G+VW V+L+K WF DGWQ+F E +S G
Sbjct: 319 KIPPKFVGIFGDELTAAATLTTPTGHVWPVRLEKASVNTCWFCDGWQEFAEHHSILXGYF 378
Query: 87 VLFEYESNSTFQAHIYDETACEINY---PSSNEESHTNGEES 125
++FEYE NS F+ I+D T CEI+Y PS+ E +G+ S
Sbjct: 379 LVFEYEGNSNFKISIFDLTTCEISYPCNPSNGSEKQYHGKRS 420
>gi|357504749|ref|XP_003622663.1| B3 domain-containing protein [Medicago truncatula]
gi|355497678|gb|AES78881.1| B3 domain-containing protein [Medicago truncatula]
Length = 315
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K +L L++ K +P K V K+ LS+ ++ PNG W++ L K K+WF+
Sbjct: 10 PIHFFKIILAQNLQEGKLMMPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLLKINGKIWFE 69
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
GW++F E +S G L+LF+Y NS F I++++A EINYP
Sbjct: 70 KGWKEFAEHHSLAHGHLLLFKYLRNSRFLVRIFEKSALEINYP 112
>gi|357464969|ref|XP_003602766.1| B3 domain-containing protein [Medicago truncatula]
gi|355491814|gb|AES73017.1| B3 domain-containing protein [Medicago truncatula]
Length = 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K +L L K +P K V K+ L + PNG W++ L K K+WF
Sbjct: 10 PVHFFKIILTQNLHHGKLMMPRKFVEKYGECLPKTICVKTPNGVNWKLNLVKSDGKIWFQ 69
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEE 117
GW++F E +S G L+LF+YE S F HI+D++A EINYP + E
Sbjct: 70 KGWKEFAEYHSLAHGHLLLFKYERTSLFHVHIFDKSALEINYPLTRVE 117
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 46 HITIPNGYVW----QVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEY--ESNSTFQA 99
H + NG VW ++++ G + GW+ F + + VG FE +N TFQ
Sbjct: 236 HFQLSNGRVWPAKYRIRMSHTGLRFELSSGWKTFAKDNNLKVGDACNFELILSTNMTFQV 295
Query: 100 HIYDETACEINYPSSNEESHTN 121
HI+ ET + N S +S N
Sbjct: 296 HIFRETDKD-NTNCSTSQSRIN 316
>gi|356560418|ref|XP_003548489.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 363
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K + L+D K IPNK V K+ L + + PNG W L+K K+WF
Sbjct: 14 PFHFFKIITAQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWFQ 73
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHT 120
GW++F E +S G L++F S FQ HI+D ++ EI+YPS E T
Sbjct: 74 KGWKEFAEYHSLAHGHLLVFRRHGTSHFQVHIFDLSSLEIDYPSKGTEGKT 124
>gi|356566214|ref|XP_003551329.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
[Glycine max]
Length = 344
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K + + + K IPNK V+K+ L + + PNG W++ LKK K+WF
Sbjct: 13 PIHFFKIITAHNVHEGKLMIPNKFVKKYGKRLQNTLFLKTPNGAEWKMILKKRDGKIWFQ 72
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS----SNEESHTNGEES 125
GW++F E +S G L++F ++ S FQ HI+D +A EI YP+ S+ G ES
Sbjct: 73 KGWKEFAEYHSLAHGHLLVFRWDVTSHFQVHIFDLSALEIEYPTEIIKGKTASNRKGNES 132
>gi|357460339|ref|XP_003600451.1| B3 domain-containing protein [Medicago truncatula]
gi|358349340|ref|XP_003638696.1| B3 domain-containing protein [Medicago truncatula]
gi|355489499|gb|AES70702.1| B3 domain-containing protein [Medicago truncatula]
gi|355504631|gb|AES85834.1| B3 domain-containing protein [Medicago truncatula]
Length = 251
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 9 IPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
+P RF K +L + L + +IPNK R++ LS+ I P+G W+V KK ++WF
Sbjct: 8 LPIRFFKIILQTNL--HRIQIPNKFTRRYGVHLSNPVLIKPPDGTKWKVYWKKINGEIWF 65
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEE------SHTNG 122
+ GW+ F E YS GSLV+FEY+ S F HI+ A EI+Y S + + H++
Sbjct: 66 EKGWKYFTENYSLGHGSLVVFEYKRTSKFDVHIFGRNAVEIDYSSCDSDDENDNVDHSDD 125
Query: 123 EES 125
+ES
Sbjct: 126 DES 128
>gi|357455493|ref|XP_003598027.1| B3 domain-containing protein [Medicago truncatula]
gi|355487075|gb|AES68278.1| B3 domain-containing protein [Medicago truncatula]
Length = 436
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+IP++ + +F +EL +VA IT+P+G W ++LKK G +V+F + WQ F E YS G +
Sbjct: 29 QIPDEFITRFGNELDNVATITVPDGREWDMELKKCGGQVFFCNNWQHFAEYYSISYGCYL 88
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEES 125
F+YE NS F IYD T EI+YP + S TNG++S
Sbjct: 89 DFKYEGNSNFVVVIYDPTFVEISYPF--KTSSTNGDQS 124
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F +LPS + D++ RI ++ + +F EL +VA +T +G W+++LKK G ++F + W
Sbjct: 236 FKMDILPSPIHDKEIRISDEFITRFGIELKNVATVTATDGRDWRMRLKKHGNDIFFYNEW 295
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY----PSSNEESHT 120
Q+F + YS G + F+YE NS F I+D T+ EI Y PS+N E++T
Sbjct: 296 QEFAKYYSLGCGCYLSFKYEGNSKFSVVIFDVTSVEICYPLKTPSTNGETNT 347
>gi|356524395|ref|XP_003530814.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 477
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%)
Query: 6 SPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
S P F++ + P L K R+P + V K+ LS+ + +PNG W+V L+K +
Sbjct: 16 SASKPIHFLRIMHPDNLLQGKLRLPAEFVNKYGKHLSNTMFLKLPNGAEWRVNLEKRDGR 75
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
VWF +GW+ FVE +S G L++F+Y+ F I+D +A EI+YP
Sbjct: 76 VWFQEGWKKFVEHHSLAHGHLLVFKYDGTFHFHVLIFDPSANEIDYP 122
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
R+P K VRK+ + LS+ + +PNG W+V L+K VWF +GW+DF E YS G L+
Sbjct: 231 RLPEKFVRKYGNHLSNSMLLKLPNGIEWKVNLEKRDGSVWFQEGWKDFAEYYSLANGHLL 290
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHT----NGEES 125
F Y+ S F I D + EI YP N+ +H N EES
Sbjct: 291 GFRYDGTSHFHVFICDMSTMEIEYP-VNKANHKRPSINSEES 331
>gi|356498158|ref|XP_003517920.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 318
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F + ++ +L++ K +PNK V K+ L + + PNG W++ L+K K+WF GW
Sbjct: 16 FFRIIIAPSLQEGKLMLPNKFVEKYGEGLPNTLFLKAPNGAEWKLTLEKRDDKMWFQKGW 75
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEES 118
++F + +S G L+LF Y+ S FQ HI+D + EI YP E
Sbjct: 76 REFAKHHSLDHGHLLLFRYQRTSHFQVHIFDGSGLEIEYPLGKVEG 121
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 11 PRFVKAVLPSTLRDQKP-RIPNKIVRK---FSHELSDVAHITIPNGYVW----QVKLKKE 62
P F+ + PS R + P P+K +K D+ ++ + NG VW +++ +
Sbjct: 201 PSFLVVIYPSNARSRGPLNFPSKFCKKHIDLRKNRGDI-NLEVLNGRVWHARYRIRTAET 259
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEY--ESNSTFQAHIYDETA 106
R+ GW+ F E + VG + FE + TFQ HI+ +A
Sbjct: 260 RRRFELSSGWKTFAEDNNLKVGDVCTFELIPATKLTFQVHIFRVSA 305
>gi|449511927|ref|XP_004164091.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 375
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+IPNK +KF ++ D+ + PNGY W ++LK+ GR +WF+DGW +FV+ + VG L+
Sbjct: 5 KIPNKFAKKFGGDILDLVTLVAPNGYRWVLELKRHGRSMWFEDGWHEFVKHHCIQVGQLL 64
Query: 88 LFEYESNSTFQAHIYDETA 106
+F +E NS F ++++ TA
Sbjct: 65 VFRFEGNSVFNFYMFNLTA 83
>gi|224123410|ref|XP_002330308.1| predicted protein [Populus trichocarpa]
gi|222871343|gb|EEF08474.1| predicted protein [Populus trichocarpa]
Length = 297
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIPN VR++ ELS VA + +P+ + W++ L K+ +WFD+G Q FVE +S G +
Sbjct: 53 RIPNTFVRRYGEELSGVAKVIVPSCHAWEIGLTKDQSNIWFDEGQQKFVEHHSIRFGYPL 112
Query: 88 LFEYESNSTFQAHIYDETACEINYPS 113
+F Y F I+D +ACEI YP
Sbjct: 113 VFAYRGCCNFSVLIFDMSACEIRYPC 138
>gi|357460343|ref|XP_003600453.1| Reduced vernalization response [Medicago truncatula]
gi|358349336|ref|XP_003638694.1| Reduced vernalization response [Medicago truncatula]
gi|355489501|gb|AES70704.1| Reduced vernalization response [Medicago truncatula]
gi|355504629|gb|AES85832.1| Reduced vernalization response [Medicago truncatula]
Length = 284
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 9 IPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
+P F K +L + L Q+ ++PNK RK LS+ I +P+G W+V KK ++WF
Sbjct: 8 LPILFFKIILQTNL--QRIQLPNKFTRKHGVGLSNPVLIKLPDGTGWKVYWKKINGEMWF 65
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESH 126
+ GW+ F E YS G LV+FEY+ S F I + A EI+Y SS++ + N H
Sbjct: 66 EKGWKTFTENYSLEHGCLVMFEYKGTSKFDVVILGQNAVEIDYDSSSDTNDENDNVDH 123
>gi|124359884|gb|ABD32483.2| Transcriptional factor B3 [Medicago truncatula]
Length = 329
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P +F K +L L R+P K V K+ L + PNG W++ L K K+WF+
Sbjct: 15 PIQFFKIILAQNLLQGNLRMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDGKIWFE 74
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESH--TNGE 123
GW+ F E +S G L+LF YE S F+ I+ ++A EI+Y ES +NG+
Sbjct: 75 KGWKQFAEHHSIGHGHLLLFRYEKTSKFEVQIFGKSALEIDYSFKRVESKKFSNGQ 130
>gi|357504773|ref|XP_003622675.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355497690|gb|AES78893.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
Length = 341
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P +F K +L L R+P K V K+ L + PNG W++ L K K+WF+
Sbjct: 10 PIQFFKIILAQNLLQGNLRMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDGKIWFE 69
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESH--TNGE 123
GW+ F E +S G L+LF YE S F+ I+ ++A EI+Y ES +NG+
Sbjct: 70 KGWKQFAEHHSIGHGHLLLFRYEKTSKFEVQIFGKSALEIDYSFKRVESKKFSNGQ 125
>gi|147787893|emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]
Length = 617
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%)
Query: 4 PSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG 63
P + P F + + PS L P IP +R++ + LS + +P G W V+L K
Sbjct: 281 PMTSTQKPHFFRIIHPSFLTHGYPGIPQTFLREYGNSLSHFVFLHLPTGAEWGVELLKLH 340
Query: 64 RKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNE 116
+V F GWQ FVE YS G +LF YE +S F ++D TA EI YP + +
Sbjct: 341 GEVLFSTGWQQFVEHYSIEYGYFLLFRYEGDSHFHVLVFDMTASEIEYPYATD 393
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP +R++ + LS+ + +P G W V+L K +V F GWQ F + YS G +L
Sbjct: 15 IPQTFLREYGNNLSNFVFLHLPTGAEWPVELLKLHGEVLFSSGWQRFADFYSIGYGHFLL 74
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESH 119
F YE +S F I+D TA EI YP + +H
Sbjct: 75 FRYEGSSHFHVLIFDMTASEIEYPYATAPNH 105
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 11 PRFVKAVLPSTLRDQKP-RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F+ + PS + +K +P V++ ++ +++ +G W VK K V F
Sbjct: 171 PFFIITMRPSYVGSKKSLTVPLSFVKRHFKRDNNNTILSVSDGRTWSVKYIKRKNNVQFS 230
Query: 70 DGWQDFVEAYSTFVGSLVLFE 90
GW FV S VG + FE
Sbjct: 231 SGWTKFVRDNSLEVGDVCAFE 251
>gi|357460335|ref|XP_003600449.1| B3 domain-containing protein [Medicago truncatula]
gi|358349344|ref|XP_003638698.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355489497|gb|AES70700.1| B3 domain-containing protein [Medicago truncatula]
gi|355504633|gb|AES85836.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
Length = 285
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 2 ISPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
++ + +P RF K +L + L Q+ +IPN R++ L++ I P+G W+V KK
Sbjct: 1 MARRNATLPIRFFKIILQTNL--QRIQIPNNFTRRYGVGLTNPVLIKAPDGTKWKVYWKK 58
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTN 121
++WF+ GW+ F E YS G LV+F+Y+ S F I A EI+Y SS + N
Sbjct: 59 INGEIWFEKGWKHFTENYSLQHGCLVVFKYKGTSKFDVLILGNNAVEIDYDSSCDTDDEN 118
Query: 122 G 122
G
Sbjct: 119 G 119
>gi|356529024|ref|XP_003533097.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 430
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 IPP--RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKV 66
+PP FVK +L ++L D +P K RK+ +S+ + +G W++ K G ++
Sbjct: 10 LPPAVHFVKIILTTSLAD-GILLPKKFTRKYGDGMSNPVFLKPADGTEWKIHYTKHGGEI 68
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
WF GW++F YS G L+ FEYE S F HI+D +A EI+YPS
Sbjct: 69 WFQKGWKEFATYYSLDHGHLLFFEYEGTSHFDVHIFDSSALEIDYPS 115
>gi|449528780|ref|XP_004171381.1| PREDICTED: uncharacterized protein LOC101228662 [Cucumis sativus]
Length = 192
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P+K +R F ELS + +PNG VW+V L+K ++WF+ W F++ YS G L++
Sbjct: 1 MPSKFIRMFGKELSSSVVLIVPNGGVWEVGLEKFNGQIWFNHSWNKFIDYYSIDYGFLLI 60
Query: 89 FEYESNSTFQAHIYDETACEINYP 112
F+YE NS+F I+D T EI YP
Sbjct: 61 FKYEGNSSFHVLIFDTTTFEIQYP 84
>gi|357460337|ref|XP_003600450.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|358349342|ref|XP_003638697.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355489498|gb|AES70701.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355504632|gb|AES85835.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
Length = 279
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 2 ISPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
++ + P F K +L + L Q+ +IPNK RK LS+ I P+G W+V KK
Sbjct: 1 MARGNSTFPIHFFKIILQTNL--QRIKIPNKFTRKHGVGLSNPVLIKPPDGTKWKVYWKK 58
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
++WF+ GW+ F+E YS G LV+F+Y+ +S F HI + A EI+Y S
Sbjct: 59 INGEIWFEKGWKYFIENYSLGHGCLVVFKYKGDSKFDVHILGQNAVEIDYDPS 111
>gi|449460668|ref|XP_004148067.1| PREDICTED: B3 domain-containing protein Os03g0212300-like [Cucumis
sativus]
Length = 260
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 4 PSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI---PNGYVWQVKLK 60
P P F K V+ S L+DQK IP K VR++ + I + +G W V L
Sbjct: 15 PRKALDSPHFFKVVMASALKDQKLEIPTKFVREYGVKAFATNQICLKVAADGRKWNVGLT 74
Query: 61 K--EGRKVWF-DDGWQDFVEAYSTFVGSLVLFEYES-NSTFQAHIYDETACEINYP 112
K +G +VWF D GWQ FVE YS + ++F+YE +S+F I+D TA EI YP
Sbjct: 75 KSNDGTRVWFHDHGWQTFVEFYSVGLEYFLVFKYECQSSSFYVVIFDRTATEIEYP 130
>gi|79583291|ref|NP_683415.2| B3 domain-containing protein [Arabidopsis thaliana]
gi|238056770|sp|Q9XIB4.2|Y1475_ARATH RecName: Full=B3 domain-containing protein At1g49475
gi|332194312|gb|AEE32433.1| B3 domain-containing protein [Arabidopsis thaliana]
Length = 190
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
+F+K +L S + ++ ++P + VR F +L+D + P G+ +++K+ G +VWF+ G
Sbjct: 33 KFIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 91
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
W +F EA+S G + F YE +S F+ I+D +A EI YP +++ N EE
Sbjct: 92 WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL--DDTDDNREE 142
>gi|224144121|ref|XP_002325193.1| predicted protein [Populus trichocarpa]
gi|222866627|gb|EEF03758.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR-KVWFDD 70
RF+K + + + KP IP K +RK + LS A + PNG +W+++L K V F
Sbjct: 20 RFIKRI-HDDIPENKPWIPRKFLRKIGNVLSKSATLEDPNGTLWRIELLKSANGMVRFQK 78
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC---EINYPSSNEESH 119
GWQDF + YS G L++FEY+ NS F IY E C I+ SSN+ H
Sbjct: 79 GWQDFADFYSLKKGDLLVFEYKGNSRFSVSIYKEMDCPAGSIDSVSSNQFGH 130
>gi|255562749|ref|XP_002522380.1| hypothetical protein RCOM_0603690 [Ricinus communis]
gi|223538458|gb|EEF40064.1| hypothetical protein RCOM_0603690 [Ricinus communis]
Length = 494
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 41 LSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAH 100
LS+VA+ +PNG+ W+V L K +WF+DGW FVE +S G L++F Y S F
Sbjct: 3 LSEVANFVVPNGHAWKVGLSKVHNDIWFNDGWHAFVEHHSICNGYLLVFGYSGFSNFNII 62
Query: 101 IYDETACEINYPSSN 115
I D TACEI YP ++
Sbjct: 63 ICDATACEIEYPCND 77
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + +R +S+ L + ++ IPNG W++ L K +++F W DF+E YS ++
Sbjct: 297 IPVQFMRDYSNVLLNEVNLIIPNGLAWRIGLTKSENRIYFHRNWNDFMEHYSIREEHFLV 356
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
FE+ TF I+ + C+ NE +
Sbjct: 357 FEFIGFFTFGVRIFAPSGCKAITSPENERA 386
>gi|449516886|ref|XP_004165477.1| PREDICTED: B3 domain-containing protein At1g49475-like [Cucumis
sativus]
Length = 138
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI---PNGYVWQVKLKK--EGRK 65
P F K V+ S L+DQK IP K VR++ + I + +G W V L K +G +
Sbjct: 18 PHFFKVVMASALKDQKLEIPTKFVREYGVKAFATNQICLKVAADGRKWNVGLTKSNDGTR 77
Query: 66 VWF-DDGWQDFVEAYSTFVGSLVLFEYE-SNSTFQAHIYDETACEINYP 112
VWF D GWQ FVE YS + ++F+YE +S+F I+D TA EI YP
Sbjct: 78 VWFHDHGWQTFVEFYSVGLEYFLVFKYERQSSSFYVVIFDRTATEIEYP 126
>gi|357460331|ref|XP_003600447.1| B3 domain-containing protein [Medicago truncatula]
gi|358349348|ref|XP_003638700.1| B3 domain-containing protein [Medicago truncatula]
gi|355489495|gb|AES70698.1| B3 domain-containing protein [Medicago truncatula]
gi|355504635|gb|AES85838.1| B3 domain-containing protein [Medicago truncatula]
Length = 203
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 9 IPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
P F K +L S L Q+ +IP+K +K LS+ I P+G W+V KK ++WF
Sbjct: 8 FPIHFFKIILQSNL--QRLKIPHKFTKKHGVGLSNPVLIKPPDGTKWKVYWKKIDGEIWF 65
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESH 126
+ GW+ F E YS GSLV+FEY+ S F I A EI+Y +S + N H
Sbjct: 66 EKGWKYFTENYSLGHGSLVVFEYKGTSKFDVVILGRNAVEIDYDTSCDTDDENDNVGH 123
>gi|297847264|ref|XP_002891513.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297337355|gb|EFH67772.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 168
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
+F+K +L T++++ ++P + VR F +L+D + P G+ +++++ G +VWF+ G
Sbjct: 30 KFIKVILLKTIKEKMMKVPARFVR-FGPKLTDNVTLETPVGFKCSIRIRRIGDEVWFEKG 88
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
W +F EA+ G + F Y+ +S F+ I+D +A EI+YP
Sbjct: 89 WSEFAEAHFLSDGHFLFFHYKGDSCFRVVIFDVSASEIDYP 129
>gi|224137014|ref|XP_002327001.1| predicted protein [Populus trichocarpa]
gi|222835316|gb|EEE73751.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K +L + Q IP K VR + LS+ A + +PNG V +V+ K K+W +GW
Sbjct: 26 FKKLLLMGSFLYQG--IPKKFVRLYGKGLSNKALLEVPNGTVSEVEFFKSDGKIWLQNGW 83
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
++F E YS +GSL++FEY+ + F I D+T EI+Y S T+G+E
Sbjct: 84 KEFAEHYSLALGSLLVFEYKKSCHFHVLILDKTTMEIDYSF----SMTDGDE 131
>gi|357460341|ref|XP_003600452.1| B3 domain-containing protein [Medicago truncatula]
gi|358349338|ref|XP_003638695.1| B3 domain-containing protein [Medicago truncatula]
gi|355489500|gb|AES70703.1| B3 domain-containing protein [Medicago truncatula]
gi|355504630|gb|AES85833.1| B3 domain-containing protein [Medicago truncatula]
Length = 274
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 2 ISPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
++ +P RF K +L + L Q+ +IPN+ R+ LS+ I P+G W+V KK
Sbjct: 1 MARGKTTLPFRFFKIILQTNL--QRIKIPNEFTRRHGVGLSNPVLIKPPDGTKWKVYWKK 58
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEY-ESNSTFQAHIYDETACEINY 111
++WF+ GW+ F E YS G LVLF Y E S F HI + A EI+Y
Sbjct: 59 INGEIWFEKGWKTFTENYSLGHGFLVLFNYEEGTSKFLVHILGKNAVEIDY 109
>gi|224094507|ref|XP_002310172.1| predicted protein [Populus trichocarpa]
gi|222853075|gb|EEE90622.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F++ +L +++QK IP + +RK LS A I +P+ W+V+ K +V F GW
Sbjct: 21 FIRIILSDIMKNQKIAIPRRFLRKHGESLSKSAVIKVPSAATWKVEFLKHKDEVSFAKGW 80
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEES 118
+ F+ YS G ++FE+E NS F I D++ E+ YP +N ++
Sbjct: 81 EMFIAYYSIDYGDFLVFEHEWNSLFTVFIIDKSFTEVGYPWNNTDA 126
>gi|357444611|ref|XP_003592583.1| 60S ribosomal protein L7 [Medicago truncatula]
gi|355481631|gb|AES62834.1| 60S ribosomal protein L7 [Medicago truncatula]
Length = 608
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE 62
S ++P I RF K V + ++D RIPN K+ +LS + P+ W++ L K+
Sbjct: 10 SLTAPAI--RFFKIVTSTNIQDGTLRIPNAFTEKYIGDLSKPMFLKTPDVKEWEIHLTKK 67
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESH 119
+W GW++F YS G +VLF+Y+ S F+ +I+D++ EI Y H
Sbjct: 68 DGDIWIQRGWKEFATHYSLDHGHMVLFQYQKTSHFEVYIFDKSTFEIEYRVDGNNQH 124
>gi|356533163|ref|XP_003535137.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Glycine max]
Length = 360
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 9 IPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
I RF K + ++L ++P +K+ +S+ + P+ W++ K ++WF
Sbjct: 12 IAVRFFKNIFRASLAHGLLKLPTIFTKKYGDGMSNPVSLKSPDSTRWKIYWTKHDGEIWF 71
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESH 126
GW+++ Y G L+ FEYE S F HI+D +A EI+YPS+ +H + SH
Sbjct: 72 QKGWKEYATYYGLDHGHLLFFEYEGTSHFNVHIFDTSAVEIDYPSNG--THHGKDSSH 127
>gi|357521093|ref|XP_003630835.1| B3 domain-containing protein [Medicago truncatula]
gi|355524857|gb|AET05311.1| B3 domain-containing protein [Medicago truncatula]
Length = 498
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
RF K V + ++D +IP+ +K+S +LS+ + P+ W+V L K+ +W G
Sbjct: 38 RFFKIVTSTNIQDGTLKIPDAFTKKYSGDLSNPMFLKTPDDKKWEVHLTKKDGDIWIHKG 97
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESH 126
W +F YS G +++F+YE S F+ +I++++ EI Y H +G H
Sbjct: 98 WNEFATHYSIDHGHMLMFQYEKTSHFKIYIFNKSTLEIEY-------HVDGNNQH 145
>gi|147775102|emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]
Length = 352
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 4 PSSPEIPPRFVKAVLPSTLRDQKPR-----------IPNKIVRKFSHELSDVAHITIPNG 52
P + P F + + PS L P IP ++++ + LS+ + +P G
Sbjct: 52 PMTSTQKPHFFRIIHPSFLTHGYPYNSEFVXKISQGIPQIFLKEYGNSLSNFVFLHLPTG 111
Query: 53 YVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
W+V+L K +V F GWQ F + YS G +LF YE +S F I+D TA EI YP
Sbjct: 112 AEWRVELLKLHGEVLFSTGWQRFADFYSIGYGHFLLFRYEGSSHFHVLIFDMTASEIEYP 171
Query: 113 SSNEESH 119
+ +H
Sbjct: 172 YATAPNH 178
>gi|357487611|ref|XP_003614093.1| B3 domain-containing protein [Medicago truncatula]
gi|355515428|gb|AES97051.1| B3 domain-containing protein [Medicago truncatula]
Length = 330
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K ++ TL+ ++ +P V+K+ +LS+ + +PNG W+V K V F GW
Sbjct: 16 FFKVIVEKTLKKKEIILPRSFVKKYGKKLSNPVTLVLPNGDKWEVHWIKRDHDVCFQKGW 75
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
++F + YS G ++F E+ S FQ I+D++A E++Y
Sbjct: 76 ENFSQHYSMSYGHFLVFRLETRSQFQVMIFDKSALEMDY 114
>gi|359484885|ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854873 [Vitis vinifera]
Length = 1020
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 4 PSSPEIPPRFVKAVLPSTLRDQKP-----------RIPNKIVRKFSHELSDVAHITIPNG 52
P + P F + + PS L P IP ++++ + LS+ + +P G
Sbjct: 720 PMTSTQKPHFFRIIHPSFLTHGYPYNSEFVNKISQGIPQIFLKEYGNSLSNFVFLHLPTG 779
Query: 53 YVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
W+++L K +V F GWQ F + YS G +LF YE +S F I+D TA EI YP
Sbjct: 780 AEWRIELLKLHDEVLFGSGWQRFADFYSIRYGHFLLFRYEGSSHFHVLIFDMTASEIEYP 839
Query: 113 SSNEESH 119
+ +H
Sbjct: 840 YATAPNH 846
>gi|255556199|ref|XP_002519134.1| DNA binding protein, putative [Ricinus communis]
gi|223541797|gb|EEF43345.1| DNA binding protein, putative [Ricinus communis]
Length = 109
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 29 IPNKIVRKFSHELSDVAHITIP-NGYVWQVKLKKEGRKVWF-DDGWQDFVEAYSTFVGSL 86
+P K V+++ +EL+++A +T+ NG VW+V L KE W+ +GW +F +S G
Sbjct: 13 LPLKFVKEYGNELANIAKLTVSSNGRVWRVGLTKERNHTWYLHNGWHEFASYHSICYGYF 72
Query: 87 VLFEYESNSTFQAHIYDETACEINY 111
++FEY+ S F+ I+D +ACEI Y
Sbjct: 73 LVFEYKGMSNFKVFIFDMSACEIPY 97
>gi|357460347|ref|XP_003600455.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|358349332|ref|XP_003638692.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355489503|gb|AES70706.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355504627|gb|AES85830.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
Length = 281
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
RF K +L + L + +IP+K ++ LS+ I P+ W+V KK ++WF+ G
Sbjct: 8 RFFKIILQTNL--HRIQIPSKFTKRHGVGLSNPVVIKTPDDTKWKVYWKKINGEIWFEKG 65
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESH 126
W+ F E YS G LV+FEY+ F I + A EI+Y +S + N H
Sbjct: 66 WKTFTENYSLGHGCLVVFEYKGTFKFDVVILGKNALEIDYDTSCDSDDENDNVDH 120
>gi|449460664|ref|XP_004148065.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 355
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELS-DVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F K VL L QK +PNK V+ +H L + A +++P+G W +L + K+ F
Sbjct: 9 PHFFKIVLHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFL 68
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
GW +FV Y+ G ++F+ + F I+D +A EI+YP
Sbjct: 69 RGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYP 111
>gi|357460323|ref|XP_003600443.1| B3 domain-containing protein [Medicago truncatula]
gi|355489491|gb|AES70694.1| B3 domain-containing protein [Medicago truncatula]
Length = 117
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Query: 6 SPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
+P +P RF K +L + L Q+ +IPN R+ LS+ I P+G W+V
Sbjct: 5 NPTLPIRFFKIILQTNL--QRIQIPNNFTRRHGVGLSNPVLIKPPDGTKWKV-------- 54
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEES 125
GW+ F E YS G LV+F+Y+ S F I D+ A EI+Y SS E G
Sbjct: 55 -----GWKFFTENYSLGHGCLVMFKYKGTSKFDVLILDQNALEIDY-SSCEPCDDKGNVG 108
Query: 126 H 126
H
Sbjct: 109 H 109
>gi|449448532|ref|XP_004142020.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 333
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR-KVWFD 69
P+F + VL L D K IP V + LS+ ++ + +G W+V L+K +W +
Sbjct: 5 PKFFRMVLQRNLDDPKLMIPKTFVEDYGKALSNWVNLKLSDGLEWKVGLRKATNGALWLE 64
Query: 70 DGWQDFVEAYSTFVGSLVLFEY---ESNSTFQAHIYDETACEINYPSSN----EESHTNG 122
GW F E Y GSL++F +S F+ I+D T E Y SS+ E+S TN
Sbjct: 65 KGWDKFSEHYCLEFGSLLIFTLLNGRRSSNFEVTIFDPTGVETKYVSSSPQLKEDSDTNA 124
Query: 123 E 123
+
Sbjct: 125 D 125
>gi|449497776|ref|XP_004160515.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 333
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR-KVWFD 69
P+F + VL L D K IP V + LS+ ++ + +G W+V L+K +W +
Sbjct: 5 PKFFRMVLQRNLDDPKLMIPKTFVEDYGKALSNWVNLKLSDGLEWKVGLRKATNGALWLE 64
Query: 70 DGWQDFVEAYSTFVGSLVLFEY---ESNSTFQAHIYDETACEINYPSSN----EESHTNG 122
GW F E Y GSL++F +S F+ I+D T E Y SS+ E+S TN
Sbjct: 65 KGWDKFSEHYCLEFGSLLIFTLLNGRRSSNFEVTIFDPTGVETKYVSSSPQLKEDSDTNA 124
Query: 123 E 123
+
Sbjct: 125 D 125
>gi|358349356|ref|XP_003638704.1| B3 domain-containing protein [Medicago truncatula]
gi|355504639|gb|AES85842.1| B3 domain-containing protein [Medicago truncatula]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 16/121 (13%)
Query: 6 SPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
+P +P RF K +L + L Q+ +IPN R+ LS+ I P+G W+V
Sbjct: 5 NPTLPIRFFKIILQTNL--QRIQIPNNFTRRHGVGLSNPVLIKPPDGTKWKV-------- 54
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEES 125
GW+ F E YS G LV+F+Y+ S F I D+ A EI+Y SS E G
Sbjct: 55 -----GWKFFTENYSLGHGCLVMFKYKGTSKFDVLILDQNALEIDY-SSCEPCDDKGNVG 108
Query: 126 H 126
H
Sbjct: 109 H 109
>gi|255538452|ref|XP_002510291.1| conserved hypothetical protein [Ricinus communis]
gi|223550992|gb|EEF52478.1| conserved hypothetical protein [Ricinus communis]
Length = 567
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
+ S L + RIP + R S +T P+G +W V L ++ ++FD GW FV
Sbjct: 21 IFSSNLSSDRLRIPARFTRHLEGRTSGSVSLTGPSGNIWTVNLIQQSEDIFFDHGWPVFV 80
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+ + G L+LF ++ F ++D++ CE
Sbjct: 81 KDHFIACGDLLLFRFDGELCFTVQVFDQSKCE 112
>gi|357504763|ref|XP_003622670.1| B3 domain-containing protein [Medicago truncatula]
gi|355497685|gb|AES78888.1| B3 domain-containing protein [Medicago truncatula]
Length = 116
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K + +L K IP K V K+ + L + ++ P+G W++ L K K+WF GW
Sbjct: 13 FFKIITIQSLLVGKLMIPRKFVEKYRNCLPNAIYLKTPSGAKWKLDLVKIDGKIWFQKGW 72
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
+ F + ++ L++F+YE S F HI++++A P N
Sbjct: 73 KQFAKYHNLAQYHLLIFKYERTSHFHVHIFEKSANRDKIPFPN 115
>gi|449497774|ref|XP_004160514.1| PREDICTED: uncharacterized LOC101221625 [Cucumis sativus]
Length = 1043
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKL-KKEGRKVWF 68
PP+F K +L + + D K IP ++ + LS + +P+G W++ L + VW
Sbjct: 4 PPKFFKILLITNVEDPKLMIPRMFIKSYGKLLSSSVILKLPDGREWKIGLTTSDNGAVWL 63
Query: 69 DDGWQDFVEAYSTFVGSLVLFEY---ESNSTFQAHIYDETACEINY 111
+ GW F E Y G L++F+ S+F+ +I++ TA E Y
Sbjct: 64 EKGWDKFSEHYCLEYGFLLVFKLLNSRGTSSFKVNIFNTTAMETEY 109
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVK-LKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
IP K + + LS+ + P+G W+V+ VW +GWQ+F Y GSL+
Sbjct: 397 IPKKFITDYGKFLSNPICLKTPDGLEWKVESTTTPNGTVWLQNGWQEFSNHYGLKSGSLL 456
Query: 88 LFEYESNSTFQAHIYDETACEINYPS-------SNEESHT 120
+F + NSTF I+++ EI Y S SN+E +T
Sbjct: 457 VFRLDGNSTFHTLIFNQNCSEIQYSSNYIGHVESNQEEYT 496
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 27 PRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSL 86
P IP ++ + + A + G W + L+K ++F +GW+ FV+ +S G
Sbjct: 605 PSIPPAFMKHLNGTFPEKATMQDHTGNSWCITLEKLDDLLYFKNGWKAFVDYHSLKYGDF 664
Query: 87 VLFEYESNSTFQAHIYDETAC 107
++F+Y + F I+ + C
Sbjct: 665 LVFQYHGHCLFDVKIFGKNGC 685
>gi|449448534|ref|XP_004142021.1| PREDICTED: uncharacterized protein LOC101221625 [Cucumis sativus]
Length = 1322
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKL-KKEGRKVWF 68
PP+F K +L + + D K IP ++ + LS + +P+G W++ L + VW
Sbjct: 4 PPKFFKILLITNVEDPKLMIPRMFIKSYGKLLSSSVILKLPDGREWKIGLTTSDNGAVWL 63
Query: 69 DDGWQDFVEAYSTFVGSLVLFEY---ESNSTFQAHIYDETACEINY 111
+ GW F E Y G L++F+ S+F+ +I++ TA E Y
Sbjct: 64 EKGWDKFSEHYCLEYGFLLVFKLLNSRGTSSFKVNIFNTTAMETEY 109
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE-GRKVWFDDGWQDFVEAYSTFVGSLV 87
IP K + + LS+ + P+G W+V+ VW +GWQ+F Y GSL+
Sbjct: 396 IPKKFITDYGKFLSNPICLKTPDGLEWKVESTTTPNGTVWLQNGWQEFSNHYGLKSGSLL 455
Query: 88 LFEYESNSTFQAHIYDETACEINYPS-------SNEESHT 120
+F + NSTF I+++ EI Y S SN+E +T
Sbjct: 456 VFRLDGNSTFHTLIFNQNCSEIQYSSNYIGHVESNQEEYT 495
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP ++ + + A + G W + L+K ++F +GW+ FV+ +S G ++
Sbjct: 720 IPPAFMKHLNGTFPEKATMQDHTGNSWCITLEKLDDLLYFKNGWKAFVDYHSLKYGDFLV 779
Query: 89 FEYESNSTFQAHIYDETAC 107
F+Y + F I+ + C
Sbjct: 780 FQYHGHCLFDVKIFGKNGC 798
>gi|449527029|ref|XP_004170515.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
[Cucumis sativus]
Length = 430
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR-KVWFD 69
P+F + VL L D K IP K V + LS+ ++ + +G W+V L++ VW +
Sbjct: 5 PKFFRIVLHRNLEDPKMMIPKKFVEDYGKLLSNSVNLKLSDGKEWRVGLRRATNGAVWLE 64
Query: 70 DGWQDFVEAYSTFVGSLV---LFEYESNSTFQAHIYDETACEINYPS 113
+GW F E Y G L+ LF+ +S F+ I+D T E + S
Sbjct: 65 EGWDKFSEHYCLEFGLLLVFKLFDGRRSSNFKVTIFDPTGVETKFIS 111
>gi|222617392|gb|EEE53524.1| hypothetical protein OsJ_36711 [Oryza sativa Japonica Group]
Length = 471
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K R F ++S + NG ++V++ KE + GW+ F AY G +++
Sbjct: 22 IPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILV 81
Query: 89 FEYESNSTFQAHIYDETACEINYPS 113
F Y NS F+ IYD +ACE P
Sbjct: 82 FIYSGNSHFKVWIYDPSACEKGLPC 106
>gi|255575098|ref|XP_002528454.1| hypothetical protein RCOM_0465210 [Ricinus communis]
gi|223532130|gb|EEF33937.1| hypothetical protein RCOM_0465210 [Ricinus communis]
Length = 318
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 47 ITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA 106
+ +P G VW+V+L + +VW + GW++ E YS G ++F+YE NS F I+D++
Sbjct: 7 LEVPGGAVWKVELLECDGEVWLEKGWRELAEHYSLEYGHFLVFKYEENSHFHVLIFDKSG 66
Query: 107 CEINYPSSN 115
EI YP ++
Sbjct: 67 SEIEYPCNS 75
>gi|122203300|sp|Q2QMT6.1|Y1208_ORYSJ RecName: Full=B3 domain-containing protein LOC_Os12g40080
gi|77556359|gb|ABA99155.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
Group]
Length = 490
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K R F ++S + NG ++V++ KE + GW+ F AY G +++
Sbjct: 41 IPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILV 100
Query: 89 FEYESNSTFQAHIYDETACEINYPS 113
F Y NS F+ IYD +ACE P
Sbjct: 101 FIYSGNSHFKVWIYDPSACEKGLPC 125
>gi|218187171|gb|EEC69598.1| hypothetical protein OsI_38945 [Oryza sativa Indica Group]
Length = 471
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K R F ++S + NG ++V++ KE + GW+ F AY G +++
Sbjct: 22 IPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILV 81
Query: 89 FEYESNSTFQAHIYDETACEINYPS 113
F Y NS F+ IYD +ACE P
Sbjct: 82 FIYSGNSHFKVWIYDPSACEKELPC 106
>gi|242084004|ref|XP_002442427.1| hypothetical protein SORBIDRAFT_08g019900 [Sorghum bicolor]
gi|241943120|gb|EES16265.1| hypothetical protein SORBIDRAFT_08g019900 [Sorghum bicolor]
Length = 354
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K V+KF+ ++++ + P+G W V + K +++F GW+DFV+A+ L+L
Sbjct: 42 IPEKFVKKFNGQITEGVDMKTPSGETWHVGVAKNQDELFFVSGWEDFVKAHELKENDLLL 101
Query: 89 FEYESNSTFQAHIYDETACE 108
F +S+FQ I++ + CE
Sbjct: 102 FTCRGSSSFQVVIFEGSGCE 121
>gi|255548626|ref|XP_002515369.1| DNA binding protein, putative [Ricinus communis]
gi|223545313|gb|EEF46818.1| DNA binding protein, putative [Ricinus communis]
Length = 368
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F + VLP + +P IP + ++A + G +W VK+ GR+ F+D
Sbjct: 6 PHFFQPVLPGF--EDEPSIPVSFFKHLKGNRREIAVLRSTAGKLWHVKI--NGRR--FED 59
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GW+DF + + +G ++F +E + F ++D +ACE Y S N
Sbjct: 60 GWKDFAKYHDLHIGDFLVFRHEGDMVFYVMVFDPSACEREYTSFN 104
>gi|449460193|ref|XP_004147830.1| PREDICTED: B3 domain-containing protein Os01g0723500-like [Cucumis
sativus]
Length = 580
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 20 STLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAY 79
STL ++ ++P K V+ + + P+G W V L +E ++F DGW F +
Sbjct: 24 STLSSERLKLPLKFVKHLEEIIGRSVVLIGPSGQTWHVNLIQENDNLFFCDGWPTFARDH 83
Query: 80 STFVGSLVLFEYESNSTFQAHIYDETACE 108
+ G ++F Y+S F ++D++ACE
Sbjct: 84 ALECGDFLVFRYDSELNFNVQVFDQSACE 112
>gi|75322658|sp|Q67VL7.1|Y6325_ORYSJ RecName: Full=Putative B3 domain-containing protein Os06g0632500
gi|51535763|dbj|BAD37802.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 393
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAH----ITIPNGYVWQVKLKKEGRKV 66
PRF+K + L +K +IP K V++ E H I P G W+V+L++E V
Sbjct: 142 PRFIKLLQQEDL--EKMKIPEKFVQQHLTETYTNNHQNAIIVCPLGKFWRVELQREQPDV 199
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
DGW F+ A+ G+++LF YE N F ++ + C Y ++
Sbjct: 200 LLRDGWAPFLAAHDLSEGNILLFRYEGNMVFTVEVFLQNGCLKEYKTA 247
>gi|125556166|gb|EAZ01772.1| hypothetical protein OsI_23800 [Oryza sativa Indica Group]
Length = 342
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAH----ITIPNGYVWQVKLKKEGRKV 66
PRF+K + L +K +IP K V++ E H I P G W+V+L++E V
Sbjct: 143 PRFIKLLQQEDL--EKMKIPEKFVQQHLTETYTNNHQNAIIVCPLGKFWRVELQREQPDV 200
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
DGW F+ A+ G+++LF YE N F ++ + C Y ++
Sbjct: 201 LLRDGWAPFLAAHDLSEGNILLFRYEGNMVFTVEVFLQNGCLKEYKTA 248
>gi|222635928|gb|EEE66060.1| hypothetical protein OsJ_22059 [Oryza sativa Japonica Group]
Length = 412
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAH----ITIPNGYVWQVKLKKEGRKV 66
PRF+K + L +K +IP K V++ E H I P G W+V+L++E V
Sbjct: 142 PRFIKLLQQEDL--EKMKIPEKFVQQHLTETYTNNHQNAIIVCPLGKFWRVELQREQPDV 199
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
DGW F+ A+ G+++LF YE N F ++ + C Y ++
Sbjct: 200 LLRDGWAPFLAAHDLSEGNILLFRYEGNMVFTVEVFLQNGCLKEYKTA 247
>gi|357437981|ref|XP_003589266.1| B3 domain-containing protein [Medicago truncatula]
gi|355478314|gb|AES59517.1| B3 domain-containing protein [Medicago truncatula]
Length = 596
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F PS+ Q R+P+ V + + +T P+G WQV+L ++ ++F
Sbjct: 14 PHFYHLFNPSST-SQSLRVPDGFVHQMEGATCGLVSLTGPSGNTWQVRLVEQDNHLFFHH 72
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
GW FV + G L++F YE + F ++ E ACE
Sbjct: 73 GWSTFVGDHHLQYGDLLVFRYEGHLHFTVQVFGENACE 110
>gi|255556203|ref|XP_002519136.1| hypothetical protein RCOM_0939080 [Ricinus communis]
gi|223541799|gb|EEF43347.1| hypothetical protein RCOM_0939080 [Ricinus communis]
Length = 125
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 57 VKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
++L KE + WFD GW +F + YS G ++F++E S F+ HI D TACEI Y
Sbjct: 1 MRLTKERKNTWFDHGWHEFAKFYSLSHGQFLVFKHEGLSNFRVHILDMTACEITY 55
>gi|357161798|ref|XP_003579207.1| PREDICTED: B3 domain-containing protein Os12g0592300-like
[Brachypodium distachyon]
Length = 515
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITI--PNGYVWQVKLKKEGRKVWFDDGWQDFVEAYST 81
+Q IP K+ KF ++ V + P+G W V + K +++F GW+DF +A+
Sbjct: 40 EQHISIPEKVASKFIRQMQIVEGFDLKAPSGETWHVGVTKVANELFFRLGWRDFAKAHEL 99
Query: 82 FVGSLVLFEYESNSTFQAHIYDETACE 108
LVLF + NS+F+ I+D + CE
Sbjct: 100 QENDLVLFTFTGNSSFEVLIFDASGCE 126
>gi|242038809|ref|XP_002466799.1| hypothetical protein SORBIDRAFT_01g014370 [Sorghum bicolor]
gi|241920653|gb|EER93797.1| hypothetical protein SORBIDRAFT_01g014370 [Sorghum bicolor]
Length = 354
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + F+ +S+V + P+G W + + + +V GW++FV A+S G +L
Sbjct: 22 IPARFANNFNGHISEVISLKSPSGKTWSIGVGSDTDEVVLQSGWKEFVSAHSIDEGDCML 81
Query: 89 FEYESNSTFQAHIYDETACEINYP 112
F+Y S+F ++D + CE +P
Sbjct: 82 FKYTGVSSFDVLVFDSSGCEKTWP 105
>gi|449496127|ref|XP_004160048.1| PREDICTED: B3 domain-containing protein Os12g0591400-like [Cucumis
sativus]
Length = 479
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
+Q+ IPNK ++L D + P+G W V L K++F GWQ+FV+A+S
Sbjct: 103 EQQLVIPNKFSNNLRNKLPDTVTLKGPSGATWDVGLTSSDDKLYFKRGWQEFVKAHSLEQ 162
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACE 108
L++F Y S F I+D ++ CE
Sbjct: 163 NDLLVFRYNGMSQFDVLIFDWKSFCE 188
>gi|449470029|ref|XP_004152721.1| PREDICTED: B3 domain-containing protein REM16-like [Cucumis
sativus]
Length = 395
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
+Q+ IPNK ++L D + P+G W V L K++F GWQ+FV+A+S
Sbjct: 34 EQQLVIPNKFSNNLRNKLPDTVTLKGPSGATWDVGLTSSDDKLYFKRGWQEFVKAHSLEQ 93
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACE 108
L++F Y S F I+D ++ CE
Sbjct: 94 NDLLVFRYNGMSQFDVLIFDWKSFCE 119
>gi|297741373|emb|CBI32504.3| unnamed protein product [Vitis vinifera]
Length = 1085
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 5 SSP-EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG 63
SSP E P F K LP D K IP F+ + A + P G VWQV+L K G
Sbjct: 657 SSPQEECPEFFKVCLPECSSD-KLLIPTAFREHFNGFVPHKAILRDPVGRVWQVELSKIG 715
Query: 64 RKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+ V+F GWQ FV + ++F Y+ F ++ T CE
Sbjct: 716 KDVYFQKGWQKFVTDNFVEMEDFLVFRYDGGYIFDFKLFRNTGCE 760
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIP V F+ + + A + G VW V++ G+ V+F +GWQ F+ S G +
Sbjct: 351 RIPTAFVEHFNGFMPEKAILRDFVGRVWHVEVGPIGKNVYFLNGWQQFLTENSVEEGDFL 410
Query: 88 LFEYESNSTFQAHIYDETACE 108
+F Y N F + T CE
Sbjct: 411 VFRYAGNCIFDFKLLGRTECE 431
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+IP V+ F+ + + A + G VW V++ + G+ V+F GWQ F+ G L
Sbjct: 64 QIPTAFVKHFNGFVPEKAILRDSVGRVWHVEVGQIGKNVYFLKGWQQFLTDNLVEEGDLF 123
Query: 88 LFEYESNSTFQAHIYDETACE 108
+F+Y+ + F +Y T C+
Sbjct: 124 VFQYDGSYIFDFKLYGTTGCQ 144
>gi|147855054|emb|CAN82365.1| hypothetical protein VITISV_027616 [Vitis vinifera]
Length = 844
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 5 SSP-EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG 63
SSP E P F K LP D K IP F+ + A + P G VWQV+L K G
Sbjct: 465 SSPQEECPEFFKVCLPECSSD-KLLIPTAFREHFNGFVPHKAILRDPVGRVWQVELSKIG 523
Query: 64 RKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+ V+F GWQ FV + ++F Y+ F ++ T CE
Sbjct: 524 KDVYFQKGWQKFVTDNFVEMEDFLVFRYDGGYIFDFKLFRNTGCE 568
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
S P+I P F LP D + RIP V F+ + + A + G VW V++ G+
Sbjct: 97 SPPKICPDFFTVYLPELSWD-RLRIPTAFVEHFNGFMPEKAILRDFVGRVWHVEVGPIGK 155
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
V+F +GWQ F+ S G ++F Y N F + T CE
Sbjct: 156 NVYFLNGWQQFLTENSVEEGDFLVFRYAGNCIFDFKLLGRTECE 199
>gi|255538454|ref|XP_002510292.1| DNA binding protein, putative [Ricinus communis]
gi|223550993|gb|EEF52479.1| DNA binding protein, putative [Ricinus communis]
Length = 360
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
+Q+ IP K R +L D + P G W+V L ++FD GW++FVE +S
Sbjct: 35 NQRLAIPEKFTRNLRRKLRDTVTLKSPCGTAWEVCLTAHENTLFFDHGWREFVEYHSLEE 94
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACE 108
+++F+Y S+F ++D ++ CE
Sbjct: 95 NDILVFKYNGESSFDVLMFDGQSMCE 120
>gi|225468908|ref|XP_002269004.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
[Vitis vinifera]
Length = 390
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI-PNGYVWQVKLKKEGRKVWFD 69
P F K ++ +D RIP V+ F L + I P VW V ++K R +F+
Sbjct: 14 PSFFKVMMGDFSKDL--RIPPAFVKHFDGVLPHKSLIMRNPGSKVWCVYVQKVDRCFFFE 71
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE---INYPSSNEESHTNGEE 124
GW FV+ +G ++F Y NS F+ IY + CE + +SN+E H+ G+E
Sbjct: 72 KGWGKFVQDNFLELGDFLVFHYVGNSKFEVIIYGKHCCEKELLAATASNDEPHSKGDE 129
>gi|399920200|gb|AFP55547.1| transcription factor b3 [Rosa rugosa]
Length = 325
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGR--KVWFDDGWQDFVEAYS 80
D + +P VR++ H L+D ++ +PN G W+++L+ R ++W + GW++F Y
Sbjct: 50 DMRLELPPAAVREYGHHLADHIYLKVPNCGKHWKIELRTSPRRDRMWLEKGWEEFANFYL 109
Query: 81 TFVGSLVLFEYES-NSTFQAHIYDETACEINYP 112
G + F E NS FQ IY EI YP
Sbjct: 110 LDQGDMATFSSEGENSHFQVSIYSWDDMEIEYP 142
>gi|255577254|ref|XP_002529509.1| hypothetical protein RCOM_1215840 [Ricinus communis]
gi|223531025|gb|EEF32878.1| hypothetical protein RCOM_1215840 [Ricinus communis]
Length = 174
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 9 IPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHEL-SDVAHITIPNGYVWQVKLKKEGRKVW 67
+P +F+K V T+ ++K R+P++++R F +EL S+VA + NG+ +V+L + KVW
Sbjct: 3 VPVKFLKPVSRRTIEEKKLRLPSRLIRNFGNELTSEVAILGFSNGFFMRVRLSEANGKVW 62
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEES 125
D V+ + G ++ F Y+ F + + +I YP N S ++ E S
Sbjct: 63 ID--TTKLVKHFHIREGFILEFTYKVFCNFSSKYF-----QIEYPYDNASSTSDEEHS 113
>gi|399920220|gb|AFP55567.1| transcription factor [Rosa rugosa]
Length = 385
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGR--KVWFDDGWQDFVEAYS 80
D + +P VR++ H L+D ++ +PN G W+++L+ R ++W + GW++F Y
Sbjct: 50 DMRLELPPAAVREYGHHLADHIYLKVPNCGKHWKIELRTSPRRDRMWLEKGWEEFANFYL 109
Query: 81 TFVGSLVLFEYES-NSTFQAHIYDETACEINYP 112
G + F E NS FQ IY EI YP
Sbjct: 110 LDQGDMATFSSEGENSHFQVSIYSWDDMEIEYP 142
>gi|75144268|sp|Q7XS75.2|Y4469_ORYSJ RecName: Full=Putative B3 domain-containing protein Os04g0346900
gi|38346491|emb|CAE02098.2| OSJNBa0020I02.5 [Oryza sativa Japonica Group]
Length = 427
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F+ +LP + K RIP+K VR + + S++A I P G W+V+L K+ V+
Sbjct: 141 PQFLTVLLPGIM--DKMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQSGVF 198
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
GW F+ + G +V+F YE N F+ ++
Sbjct: 199 LGGGWLQFLSFHGISRGDVVIFRYEGNLVFKISVF 233
>gi|147819688|emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]
Length = 765
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K +P DQ RIP V++FS + + A + G V+LK+ + V+ +
Sbjct: 474 PEFFKVYIPD-FSDQHLRIPPAFVKEFSGNIPNNAILRDIRGKYCHVELKEVEKDVFIKN 532
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
GWQ+FV +S G ++F Y + F I+ C
Sbjct: 533 GWQEFVRGHSVEQGDFLVFRYHGKALFDVSIFGRNGCR 570
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 28 RIPNKIVRKFSHELSDVAHITI-PNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSL 86
RIP V+ F L + I P VW V ++K R +F+ GW FV+ +G
Sbjct: 92 RIPPAFVKHFDGVLPHKSLIMRNPGSKVWCVYVQKVDRCFFFEKGWGKFVQDNFLELGDF 151
Query: 87 VLFEYESNSTFQAHIYDETACE---INYPSSNEESHTNGEE 124
++F Y NS F+ IY + CE + +SN+E H+ G+E
Sbjct: 152 LVFHYVGNSKFEVIIYGKHCCEKELLAATASNDEPHSKGDE 192
>gi|242084000|ref|XP_002442425.1| hypothetical protein SORBIDRAFT_08g019885 [Sorghum bicolor]
gi|241943118|gb|EES16263.1| hypothetical protein SORBIDRAFT_08g019885 [Sorghum bicolor]
Length = 173
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P KI ++ +V + + +G + +++ KE + F GW F AY G +++
Sbjct: 33 LPKKITNNIRGQIQEVVKLQVADGKTYDIQIDKEPNGLVFGSGWAKFASAYELEQGDMLV 92
Query: 89 FEYESNSTFQAHIYDETACEINYPS--SNEESHTNGEESH 126
F Y N F+ I+D CE + N S G H
Sbjct: 93 FRYSRNCLFKVQIFDPNGCEKEFSCFKVNSSSSVEGRCGH 132
>gi|147805292|emb|CAN64872.1| hypothetical protein VITISV_026093 [Vitis vinifera]
Length = 262
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 6 SPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
P P F K ++ K RIP ++KF + A + G W V +K+E
Sbjct: 4 GPRRNPSFFKVLIGDFT--NKLRIPPAFMKKFRRMTFNNAVLKTVTGESWMVSVKQEDSC 61
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEI--NYPSSNEESHTNGE 123
+F GW+ FV+ G ++F + +STFQ +YD++ CE N + + +GE
Sbjct: 62 YFFKKGWRKFVKDQHLEAGDFLVFWFLGDSTFQVVVYDKSGCEKDPNLGAKGKRIGLHGE 121
Query: 124 ESH 126
+++
Sbjct: 122 KNN 124
>gi|222628647|gb|EEE60779.1| hypothetical protein OsJ_14353 [Oryza sativa Japonica Group]
Length = 331
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 14 VKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
+K ++PS+ R K RIP+K VR + + S++A I P G W+V+L K+ V+
Sbjct: 48 LKVLVPSSFR--KMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQSGVFLGG 105
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
GW F+ + G +V+F YE N F+ ++
Sbjct: 106 GWLQFLSFHGISRGDVVIFRYEGNLVFKISVF 137
>gi|224137334|ref|XP_002327100.1| predicted protein [Populus trichocarpa]
gi|222835415|gb|EEE73850.1| predicted protein [Populus trichocarpa]
Length = 735
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIP ++ + + + P+G VW L +E V F +GW +FV + G L+
Sbjct: 55 RIPVSFIKHMEGKTPGLVSLLGPSGDVWTADLTQENDDVLFSNGWSEFVRDHFLECGDLL 114
Query: 88 LFEYESNSTFQAHIYDETACE 108
+F Y F ++D++ACE
Sbjct: 115 VFRYHGELCFSVQVFDQSACE 135
>gi|242084008|ref|XP_002442429.1| hypothetical protein SORBIDRAFT_08g019930 [Sorghum bicolor]
gi|241943122|gb|EES16267.1| hypothetical protein SORBIDRAFT_08g019930 [Sorghum bicolor]
Length = 356
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 25 QKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVG 84
Q IP K V + +++ V ++ P+G W V + K ++ F GW DF A+
Sbjct: 39 QGISIPEKFVSNLNGQITKVFNLKAPSGETWLVNVTKNADELLFKSGWDDFARAHELQEN 98
Query: 85 SLVLFEYESNSTFQAHIYDETACE 108
LV+F N +F I D + CE
Sbjct: 99 DLVIFTCSGNCSFDVLILDSSGCE 122
>gi|239983850|sp|Q7XS74.3|Y4474_ORYSJ RecName: Full=Putative B3 domain-containing protein Os04g0347400
gi|218194624|gb|EEC77051.1| hypothetical protein OsI_15435 [Oryza sativa Indica Group]
Length = 434
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F++ +LP + +K RIP K V+ + H +A I P G W+++L+K+ ++
Sbjct: 151 PQFLRVLLPGFM--EKMRIPAKFVQHYIAEEHLNIHMASILSPLGKFWRIELEKDELGMF 208
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESHH 127
F GW F+ + G +VL +E N F+ ++ C+ + + ++ + + H
Sbjct: 209 FKGGWLQFLSFHGISPGDVVLLRHEGNLVFKIKVFGINGCKKDLKTKDDITIQQSARNQH 268
>gi|357161795|ref|XP_003579206.1| PREDICTED: B3 domain-containing protein LOC_Os12g40080-like
[Brachypodium distachyon]
Length = 433
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
RF K ++ S R+ IP K VR + ++ + P+G V++ KE + G
Sbjct: 26 RFFK-IMISDFRNG-VNIPEKFVRSVGGHIPELVKLETPDGNTHTVRVAKEQNNLVLRSG 83
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
W+ F Y G L+ F Y +S F+ IYD +ACE
Sbjct: 84 WEIFASVYELEEGDLLRFRYSGDSHFKVEIYDLSACE 120
>gi|357121128|ref|XP_003562273.1| PREDICTED: B3 domain-containing protein Os03g0619600-like
[Brachypodium distachyon]
Length = 527
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP V ++S + PNG V+ V + + K GW+ FV+A L++
Sbjct: 36 IPESFVNYSPRKISGAIKLEAPNGSVYDVGITEHQNKTLLRSGWEAFVDANHIVENDLLM 95
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F+Y NS F+ ++D + CE ++ ES+ + +E
Sbjct: 96 FQYRGNSRFKVIVFDSSGCEKVVSCAHIESNISDQE 131
>gi|255538450|ref|XP_002510290.1| conserved hypothetical protein [Ricinus communis]
gi|223550991|gb|EEF52477.1| conserved hypothetical protein [Ricinus communis]
Length = 285
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 12 RFVKAVLPS----TLRDQ----KPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-- 61
RF + ++P +R Q K +P R+ E SD A + + W +K+ K
Sbjct: 6 RFFRVMMPGFRSKLVRGQYVSCKQPLPVAFCRQIKGEGSDRA-VVKSSDREWHIKVGKCC 64
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
+G ++F++GW+DFV+ + +G V+FEY + F A ++D +ACE P S
Sbjct: 65 DG-SLYFEEGWEDFVKHHGLNLGDFVVFEYNGDLVFDAIVFDSSACEKEIPVS 116
>gi|5430754|gb|AAD43154.1|AC007504_9 Hypothetical Protein [Arabidopsis thaliana]
Length = 210
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 23/113 (20%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
+F+K +L S + ++ ++P + VR F +L+D + P G+ +++K+ G +VWF+ G
Sbjct: 30 KFIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 88
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
W+D S F+ I+D +A EI YP +++ N EE
Sbjct: 89 WRD--------------------SCFRVVIFDVSASEIEYPL--DDTDDNREE 119
>gi|116309437|emb|CAH66511.1| OSIGBa0111I14.6 [Oryza sativa Indica Group]
Length = 431
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F+ +LP + K RIP+K VR + + S++A I P G W+V+L K+ V+
Sbjct: 145 PQFLTVLLPGIM--DKMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQSGVF 202
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
GW + + G +V+F YE N F+ ++
Sbjct: 203 LGGGWLQLLSFHGISRGDVVIFRYEGNLVFKISVF 237
>gi|399920198|gb|AFP55545.1| transcription factor b3 [Rosa rugosa]
Length = 436
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 22 LRDQKPRIPNKIVRKFSHELSDVAHITIPNGYV-WQVKLKKEGR--KVWFDDGWQDFVEA 78
L+D K +P VRK+ +++D + +PNG W+++L+ R ++W + GW++F
Sbjct: 45 LKDGKKELPPAAVRKYGDQMADHIFLKVPNGGKHWKIELRTSPRRDRMWLEKGWEEFASF 104
Query: 79 YSTFVGSLVLFEYES-NSTFQAHIYDETACEINYP 112
Y G L F E ++ FQ I+ EI YP
Sbjct: 105 YLLDQGDLATFSSEGEHAHFQIRIFSWDDMEIYYP 139
>gi|218194623|gb|EEC77050.1| hypothetical protein OsI_15430 [Oryza sativa Indica Group]
Length = 457
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F+ +LP + K RIP+K VR + + S++A I P G W+V+L K+ V+
Sbjct: 171 PQFLTVLLPGIM--DKMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQSGVF 228
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
GW + + G +V+F YE N F+ ++
Sbjct: 229 LGGGWLQLLSFHGISRGDVVIFRYEGNLVFKISVF 263
>gi|357478793|ref|XP_003609682.1| B3 domain-containing protein [Medicago truncatula]
gi|355510737|gb|AES91879.1| B3 domain-containing protein [Medicago truncatula]
Length = 377
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 5 SSPEIPPR-----FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPN----GYVW 55
SS E+ R F K +L L + K ++P VR+ +++ + +PN W
Sbjct: 2 SSTELDHRSNGVHFFKIILQRNLNEGKLKVPVSFVRRHWLGITNPVTLRLPNMTENKVFW 61
Query: 56 QVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP--S 113
+ K VWF +GW++F + S L LF+Y+ NS F + + EI YP
Sbjct: 62 E---KTSDYNVWFCNGWKEFAKYLSLGDSQLTLFQYQENSVFNVIVCGKCGLEIKYPLKE 118
Query: 114 SNEESHTNGEES 125
+N+E H EES
Sbjct: 119 TNKE-HEEVEES 129
>gi|224063561|ref|XP_002301205.1| predicted protein [Populus trichocarpa]
gi|222842931|gb|EEE80478.1| predicted protein [Populus trichocarpa]
Length = 430
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
DQ+ IP R +L D ++ P+G W+V L ++F+ GWQ+FV+ ++
Sbjct: 35 DQRLAIPEIFARHLRKKLPDTVNLKGPSGAAWEVGLTTYNNTLFFNHGWQEFVKDHALEE 94
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACEINYP 112
++F+Y S F ++D ++ CE P
Sbjct: 95 NDFLIFKYNGESDFDVLMFDMQSMCEKVAP 124
>gi|242083998|ref|XP_002442424.1| hypothetical protein SORBIDRAFT_08g019882 [Sorghum bicolor]
gi|241943117|gb|EES16262.1| hypothetical protein SORBIDRAFT_08g019882 [Sorghum bicolor]
Length = 265
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR-KVWFDDGWQDFVEAYSTFVGSLV 87
IP K V ++S+ + +PNG + V++ +E + ++ GW +F AY +G L+
Sbjct: 56 IPKKFVANIREKISEQVILKVPNGKTYTVEVAEEQQNELVLRSGWAEFASAYELELGDLL 115
Query: 88 LFEYESNSTFQAHIYDETACE 108
+F NS I+D +ACE
Sbjct: 116 VFTNNGNSHLTVRIFDRSACE 136
>gi|218193325|gb|EEC75752.1| hypothetical protein OsI_12641 [Oryza sativa Indica Group]
Length = 542
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + +F ++S + P G V+ VK+ K K GW+ FV+A+ +L
Sbjct: 43 IPNKFLNQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F + NS F I D CE + S + + +E
Sbjct: 103 FRHIENSRFAVLILDSDGCEKVFSCSGKRRASGVQE 138
>gi|449520754|ref|XP_004167398.1| PREDICTED: putative B3 domain-containing protein At5g66980-like
[Cucumis sativus]
Length = 309
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K LP++ Q IP V+ F+ + A I +G W V L++ V F DGW
Sbjct: 21 FFKVFLPNS-SSQSMSIPPAFVKYFNGRIPSEAIIRDQSGNSWHVTLEELKNIVLFKDGW 79
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
Q+FV+++ G ++F+Y+ + F I+ + C+
Sbjct: 80 QEFVDSHHLKRGYFLVFQYDGSHVFDVKIFGKNGCK 115
>gi|15236030|ref|NP_194892.1| B3 domain-containing protein REM5 [Arabidopsis thaliana]
gi|75336924|sp|Q9SB80.1|REM5_ARATH RecName: Full=B3 domain-containing protein REM5; AltName:
Full=Auxin response factor 22; AltName: Full=Protein
REPRODUCTIVE MERISTEM 5
gi|3849834|emb|CAA19759.1| putative protein [Arabidopsis thaliana]
gi|7270067|emb|CAB79882.1| putative protein [Arabidopsis thaliana]
gi|20152526|emb|CAD29642.1| putative auxin response factor 22 [Arabidopsis thaliana]
gi|23296509|gb|AAN13074.1| unknown protein [Arabidopsis thaliana]
gi|225898843|dbj|BAH30552.1| hypothetical protein [Arabidopsis thaliana]
gi|332660540|gb|AEE85940.1| B3 domain-containing protein REM5 [Arabidopsis thaliana]
Length = 352
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P F + +LP +IP K K HE + V + P+ W+VK+ EG K+
Sbjct: 12 PHFFQPILPGF--KSHIKIPVKFFSKHIEGKHEGNTVYLRSYPSRRTWKVKM--EGHKL- 66
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS-----NEESHTNG 122
+GW++FVEA+ VG V+F+++ + F + CE+ Y S NEES G
Sbjct: 67 -TEGWKEFVEAHDLRVGDFVVFKHKGDMLFHVTAIGPSCCEVQYAPSRSHDRNEESDEIG 125
Query: 123 EESHH 127
E S +
Sbjct: 126 ESSRN 130
>gi|414868751|tpg|DAA47308.1| TPA: hypothetical protein ZEAMMB73_871709 [Zea mays]
Length = 282
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P K + F ++++ H+ P+ W V ++K G K++ GW++F +A+ L+
Sbjct: 52 VPEKFAKNFKGQITEEFHLKSPSSAETWHVGVEKHGDKLFLVSGWENFAKAHELEENDLL 111
Query: 88 LFEYESNSTFQAHIYDETACE 108
LF NS+F+ ++ + CE
Sbjct: 112 LFACSGNSSFEVLVFGASGCE 132
>gi|242084002|ref|XP_002442426.1| hypothetical protein SORBIDRAFT_08g019887 [Sorghum bicolor]
gi|241943119|gb|EES16264.1| hypothetical protein SORBIDRAFT_08g019887 [Sorghum bicolor]
Length = 592
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F+K ++ ++ K IP K ++ + + PNG + VK+ KE + GW
Sbjct: 140 FIKIMISASDFKNKLTIPKKFATNVGGQIPEEVQLEAPNGKTYNVKVAKEQNDLVIGTGW 199
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F ++ G L++F Y + F+ I+D + CE + ++ G+E
Sbjct: 200 TKFSSSHDLRQGDLLVFTYSGYAHFKVRIFDPSNCEKEFSCVVMDNFPYGQE 251
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 36/77 (46%)
Query: 32 KIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEY 91
K + ++S+ + + +G + +++ K+ ++ GW F AY G ++F Y
Sbjct: 5 KYAKNVGDQISETITLKVLDGETYDIEVTKKNNELLLCFGWVAFANAYELEQGDTLVFRY 64
Query: 92 ESNSTFQAHIYDETACE 108
S F+ I+ + CE
Sbjct: 65 SGESHFEVQIFSPSTCE 81
>gi|357115786|ref|XP_003559667.1| PREDICTED: putative B3 domain-containing protein Os08g0325100-like
[Brachypodium distachyon]
Length = 337
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+PN+ VR+FS E+ + NG + V + K K+ GW FV+ Y +G V+
Sbjct: 38 VPNEFVRRFSGEIPGEIELETRNGQTYTVGVSKYPDKLVLTAGWGAFVKTYDLQIGDSVV 97
Query: 89 FEYESNSTFQAHIYD 103
F Y+ +S F ++D
Sbjct: 98 FRYDGDSQFNVIVFD 112
>gi|414868752|tpg|DAA47309.1| TPA: hypothetical protein ZEAMMB73_871709 [Zea mays]
gi|414868753|tpg|DAA47310.1| TPA: hypothetical protein ZEAMMB73_871709 [Zea mays]
Length = 273
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P K + F ++++ H+ P+ W V ++K G K++ GW++F +A+ L+
Sbjct: 43 VPEKFAKNFKGQITEEFHLKSPSSAETWHVGVEKHGDKLFLVSGWENFAKAHELEENDLL 102
Query: 88 LFEYESNSTFQAHIYDETACE 108
LF NS+F+ ++ + CE
Sbjct: 103 LFACSGNSSFEVLVFGASGCE 123
>gi|125544890|gb|EAY91029.1| hypothetical protein OsI_12634 [Oryza sativa Indica Group]
Length = 357
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP++ V F ++ + PNG ++ V++ + K GW+ FV+A+ VG +L
Sbjct: 43 IPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D CE
Sbjct: 103 FRHIENSCFEVMILDSDGCE 122
>gi|75149551|sp|Q851V5.1|Y3216_ORYSJ RecName: Full=Putative B3 domain-containing protein Os03g0621600
gi|28201553|gb|AAO34491.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|108709878|gb|ABF97673.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
Group]
Length = 1029
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP+K R F +S + +GY + V++ K+ + GW+ FV A+ +G ++
Sbjct: 467 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 526
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
F+Y + Q I+D + CE + S E +
Sbjct: 527 FKYNGDFLLQVLIFDPSGCEKSTSCSMENA 556
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
V+ R Q IP K F ++ + NG V + K K+ GW +F
Sbjct: 153 VMIGGFRRQMT-IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFA 211
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
++ +G ++F Y NS F+ I+D + C
Sbjct: 212 NSHDIKMGDFLVFRYTGNSQFEVKIFDPSGC 242
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPN+ ++ F ++ + + +G + V++ K K+ GW+ FV A+ +G ++
Sbjct: 748 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 807
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F Y+ S + I+ + CE + S ++ T+ E
Sbjct: 808 FSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGE 843
>gi|356562313|ref|XP_003549416.1| PREDICTED: B3 domain-containing protein Os01g0723500-like [Glycine
max]
Length = 561
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
V S + ++P+ V +T P+G W V+L K+ ++ GW FV
Sbjct: 9 VYSSAFSSHRLKLPDGFVCHMEGRTYGSVSLTGPSGKTWTVQLIKQENDLFLHHGWSTFV 68
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+ G L++F YE + F ++D+ ACE
Sbjct: 69 VDHQLECGELLVFRYEGHLHFTVQVFDKDACE 100
>gi|297601338|ref|NP_001050679.2| Os03g0621600 [Oryza sativa Japonica Group]
gi|255674715|dbj|BAF12593.2| Os03g0621600 [Oryza sativa Japonica Group]
Length = 973
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP+K R F +S + +GY + V++ K+ + GW+ FV A+ +G ++
Sbjct: 411 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 470
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
F+Y + Q I+D + CE + S E +
Sbjct: 471 FKYNGDFLLQVLIFDPSGCEKSTSCSMENA 500
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
V+ R Q IP K F ++ + NG V + K K+ GW +F
Sbjct: 97 VMIGGFRRQMT-IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFA 155
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
++ +G ++F Y NS F+ I+D + C
Sbjct: 156 NSHDIKMGDFLVFRYTGNSQFEVKIFDPSGC 186
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPN+ ++ F ++ + + +G + V++ K K+ GW+ FV A+ +G ++
Sbjct: 692 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 751
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F Y+ S + I+ + CE + S ++ T+ E
Sbjct: 752 FSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGE 787
>gi|357158263|ref|XP_003578070.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing protein
Os12g0592300-like [Brachypodium distachyon]
Length = 371
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 25 QKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVG 84
Q IP K FS ++ + +P+G W+V ++K K++F GW F +A+
Sbjct: 39 QSISIPEKFANNFSGQIDKGCTLKVPSGETWRVGIEKIADKLFFVSGWDAFAKAHELQEH 98
Query: 85 SLVLFEYESNSTFQAHIYDETACE 108
++ F+ + +F I+D + CE
Sbjct: 99 DILFFKCSGSGSFDVLIFDASGCE 122
>gi|218193328|gb|EEC75755.1| hypothetical protein OsI_12650 [Oryza sativa Indica Group]
Length = 843
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP+K R F +S + NGY + V++ K+ + GW+ FV A+ +G ++
Sbjct: 329 IPDKFARHFKGVISKTIKLEPRNGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 388
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
F+Y + Q I+D + CE + S E +
Sbjct: 389 FKYNGDFLLQVLIFDPSGCEKSTSCSMENA 418
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K F ++ + NG V + K K+ GW +F ++ +G ++
Sbjct: 38 IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLV 97
Query: 89 FEYESNSTFQAHIYDETAC 107
F Y NS F+ I+D + C
Sbjct: 98 FRYTGNSQFEVKIFDPSGC 116
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPN+ ++ F ++ + + +G + V++ K K+ GW+ FV A+ +G ++
Sbjct: 562 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 621
Query: 89 FEYESNSTFQAHIYDETACE 108
F Y+ S + I+ + CE
Sbjct: 622 FSYDGISKLKVLIFGPSGCE 641
>gi|102139987|gb|ABF70122.1| transcriptional factor B3 family protein / AT hook motif-containing
protein [Musa balbisiana]
Length = 331
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIP K ++ S S A + P+G W V+L K+ + + GW FV+ +S +
Sbjct: 20 RIPPKFLKHISSVGSKKAILQGPSGSKWHVELGKDMKDTFLTTGWPKFVKDHSLREYEFL 79
Query: 88 LFEYESNSTFQAHIYDETACE 108
+F+Y+ + F I+D +ACE
Sbjct: 80 VFQYDGDMRFTVLIFDTSACE 100
>gi|356538857|ref|XP_003537917.1| PREDICTED: B3 domain-containing protein Os11g0197600-like [Glycine
max]
Length = 411
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 16 AVLPSTLRDQKP-RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQD 74
AV +T+++ K ++P + ++ + +L + + P+G WQV + K+G V+ D+GW
Sbjct: 9 AVFFTTIKNTKQLKVPEEFLKHLNKDLWSNSVLIGPSGDKWQVTILKKGNNVYMDNGWSQ 68
Query: 75 FVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
F++ S + +LF Y + F I+ E
Sbjct: 69 FLKDNSVVLDEFLLFTYHGGNCFYVQIFGGNGLE 102
>gi|242075136|ref|XP_002447504.1| hypothetical protein SORBIDRAFT_06g002075 [Sorghum bicolor]
gi|241938687|gb|EES11832.1| hypothetical protein SORBIDRAFT_06g002075 [Sorghum bicolor]
Length = 378
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHEL---SDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F++ P +K +P + V+ + E S A I P G W ++LK + ++
Sbjct: 123 PQFIRIFHPYL--SEKMILPARFVKNYVTEECLNSKTAVILSPLGKFWHIELKNDKSGMF 180
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F GW F+E + G ++L YE N F+ + C+ ++ N N E+
Sbjct: 181 FTGGWSQFLEFHGICNGDVLLLRYEGNMVFKFKAFGLGGCQKDFRHQNAGIQLNTEK 237
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 45 AHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDE 104
A + P G VW+V++ ++G + GW +F+ A+ +G V+ +E ++D
Sbjct: 38 ALVVSPFGKVWRVEVGRDGDGAFLGRGWAEFLAAHGVGLGWFVVLRHEGGGALTVKVFDT 97
Query: 105 TAC--EINYPSSNEESHTN 121
+ C E P++ S T+
Sbjct: 98 SLCIKEFGAPAAVMTSRTS 116
>gi|357161803|ref|XP_003579208.1| PREDICTED: B3 domain-containing protein Os12g0592300-like
[Brachypodium distachyon]
Length = 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIP--NGYVWQVKLKKEGRKVWFD 69
RF K L S +Q IP+K F ++ V + +G W V + K ++F
Sbjct: 30 RFFK--LMSGDFEQSISIPDKFASNFIRQMQIVEGFDLKAQSGETWHVGVTKVSNDLFFR 87
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
GW DF +A+ L+LF + NS+F I+D + CE
Sbjct: 88 SGWGDFAKAHELQENDLLLFTFTGNSSFDVLIFDASGCE 126
>gi|218187170|gb|EEC69597.1| hypothetical protein OsI_38944 [Oryza sativa Indica Group]
Length = 743
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 41 LSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAH 100
+S VA + +P+G + V++ KE ++ F GW+ F AY G ++ F Y NS F+
Sbjct: 163 ISGVAKLEVPDGKTYDVEISKEHNELVFRSGWEVFAIAYELEQGDILAFGYSGNSHFKVQ 222
Query: 101 IYDETACE 108
I++ + CE
Sbjct: 223 IFNPSNCE 230
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K ++S+V + +PNG + V + KE ++ GW F Y +++
Sbjct: 19 VPTKFANFIRGQISEVVKLEVPNGKTYDVHVAKEHNELVLRSGWGAFARDYELKQCDILV 78
Query: 89 FEYESNSTFQAHIYDETACE 108
F Y +S F+ I++ + CE
Sbjct: 79 FTYSGSSRFKVRIFNPSGCE 98
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K ++ + + IP K ++ + + + +G ++ V++ +E ++ GW
Sbjct: 282 FFKVMMSVSDIKDELAIPKKFAANVRGKIPEQVRLEVSDGKMYNVQVTEEQDELVLRSGW 341
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
++F Y G L++F + +S F+ I+D + E
Sbjct: 342 ENFSSTYQLKHGDLLVFIHSGHSHFKVLIFDPSCTE 377
>gi|212722990|ref|NP_001132338.1| uncharacterized protein LOC100193780 [Zea mays]
gi|194694118|gb|ACF81143.1| unknown [Zea mays]
gi|414868750|tpg|DAA47307.1| TPA: B3 DNA binding domain containing protein [Zea mays]
Length = 365
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P K + F ++++ H+ P+ W V ++K G K++ GW++F +A+ L+
Sbjct: 52 VPEKFAKNFKGQITEEFHLKSPSSAETWHVGVEKHGDKLFLVSGWENFAKAHELEENDLL 111
Query: 88 LFEYESNSTFQAHIYDETACE 108
LF NS+F+ ++ + CE
Sbjct: 112 LFACSGNSSFEVLVFGASGCE 132
>gi|255538456|ref|XP_002510293.1| DNA binding protein, putative [Ricinus communis]
gi|223550994|gb|EEF52480.1| DNA binding protein, putative [Ricinus communis]
Length = 337
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
D++ IP + + +L + + P+G W+V L V+F+ GW+ FV +S
Sbjct: 35 DRRLAIPEQFTKNLRRKLPKIITLRGPSGRTWEVGLAANDDTVFFNHGWEAFVIDHSLQE 94
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACE 108
L++F+Y +S F I+D ++ CE
Sbjct: 95 KDLLIFKYNGDSCFDVLIFDGQSLCE 120
>gi|195619964|gb|ACG31812.1| B3 DNA binding domain containing protein [Zea mays]
gi|195636174|gb|ACG37555.1| B3 DNA binding domain containing protein [Zea mays]
gi|224035519|gb|ACN36835.1| unknown [Zea mays]
Length = 356
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P K + F ++++ H+ P+ W V ++K G K++ GW++F +A+ L+
Sbjct: 43 VPEKFAKNFKGQITEEFHLKSPSSAETWHVGVEKHGDKLFLVSGWENFAKAHELEENDLL 102
Query: 88 LFEYESNSTFQAHIYDETACE 108
LF NS+F+ ++ + CE
Sbjct: 103 LFACSGNSSFEVLVFGASGCE 123
>gi|242038821|ref|XP_002466805.1| hypothetical protein SORBIDRAFT_01g014420 [Sorghum bicolor]
gi|241920659|gb|EER93803.1| hypothetical protein SORBIDRAFT_01g014420 [Sorghum bicolor]
Length = 341
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP+K V++ +++ + G+ + V++ K+ GW++FV A+ +G ++
Sbjct: 70 IPDKFVQRIRGLIANSVKLESRCGHTFDVEVANSLGKLLLQTGWKEFVTAHDLSMGDFLV 129
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESH 126
F+Y+ S + I+D + CE + +H G E+
Sbjct: 130 FKYDGTSRLKVFIFDLSCCEKVPQCRVKRNHICGRETR 167
>gi|122203301|sp|Q2QMT7.1|Y1214_ORYSJ RecName: Full=B3 domain-containing protein Os12g0591400
gi|77556358|gb|ABA99154.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
Group]
Length = 661
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 41 LSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAH 100
+S VA + +P+G + V++ KE ++ F GW+ F AY G ++ F Y NS F+
Sbjct: 226 ISGVAKLEVPDGKTYDVEISKEHNELVFRSGWEVFAIAYELEQGDILAFGYSGNSHFKVQ 285
Query: 101 IYDETACE 108
I++ + CE
Sbjct: 286 IFNPSNCE 293
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K ++S+V + +PNG + V++ KE ++ GW F Y +++
Sbjct: 19 VPTKFANFIRGQISEVVKLEVPNGKTYDVQVAKEHNELVLRSGWGAFARDYELKQCDILV 78
Query: 89 FEYESNSTFQAHIYDETACE 108
F Y +S F+ I++ + CE
Sbjct: 79 FAYSGSSRFKVRIFNPSGCE 98
>gi|357161806|ref|XP_003579209.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing protein
Os12g0591400-like [Brachypodium distachyon]
Length = 685
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 25 QKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVG 84
+K IP K V F ++++V + P+G ++ V K+ K+ GW F Y G
Sbjct: 53 EKMIIPRKFVENFKGQIAEVIKLEAPDGNIYNVHTIKDLNKIHLGSGWASFANLYELKEG 112
Query: 85 SLVLFEYESNSTFQAHIYDETAC 107
+++F Y +S F+ I+D +C
Sbjct: 113 YMLVFRYIRDSHFKVLIFDYGSC 135
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 25 QKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVG 84
Q+ IP K V F +S+V + P+G V+ +++ K+ K+ GW F + +
Sbjct: 209 QEMSIPEKFVNNFRGHISEVIKVEAPDGNVYSIQVTKDLDKIVLGSGWAAFADTHELKEH 268
Query: 85 SLVLFEYESNSTFQAHIYDETACE 108
+++F Y +S F+ I++ CE
Sbjct: 269 DVLVFRYIGDSHFKTIIFEPNGCE 292
>gi|356541125|ref|XP_003539033.1| PREDICTED: B3 domain-containing protein Os11g0197600-like [Glycine
max]
Length = 327
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 16 AVLPSTLRDQKP-RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQD 74
AV + + + K ++P + ++ + +LS A + P+G WQV + K+G V+ ++GW
Sbjct: 19 AVFFTIINNTKLLKVPEEFLKHLNEDLSSNAVLIGPSGDKWQVTILKKGNNVYMNNGWSQ 78
Query: 75 FVEAYSTFVGSLVLFEYESNSTFQAHIY 102
F++ S + +LF Y + F I+
Sbjct: 79 FLKDNSVVLDEFLLFTYHGGNCFYVQIF 106
>gi|414588000|tpg|DAA38571.1| TPA: hypothetical protein ZEAMMB73_584317 [Zea mays]
Length = 552
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHEL---SDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F++ + S L +K +P + V+ + E S +A I P W+V+LK + ++
Sbjct: 137 PQFIR-IFHSNL-SEKMMLPARFVKDYVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIF 194
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESH 126
F GW F++ + G ++L +YE N F+ + + C+ ++ + N N ++
Sbjct: 195 FTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKNQNAGIQLNTKKQQ 253
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 15 KAVLPSTLRDQKPRIPNKIVRKFSHELSD-----VAHITIPNGYVWQVKLKKEGRKVWFD 69
K +LP++ K RI +++ F + A + P G VW+V++ ++G
Sbjct: 19 KVLLPTSF--HKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLG 76
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC--EINYPSS 114
GW +F+ A+ +G V+ YE ++D + C E P++
Sbjct: 77 RGWAEFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAA 123
>gi|218188980|gb|EEC71407.1| hypothetical protein OsI_03573 [Oryza sativa Indica Group]
Length = 401
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFS--HELSDVAHITIPNGYVWQVKLKKEGRK 65
+IPP F K IP + RK E S A + P+G W V +++
Sbjct: 33 KIPPNFCK------------HIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTAEG 80
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+F GW FV+ + V+F Y+ N+ F A ++D TACE
Sbjct: 81 TFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFDRTACE 123
>gi|297720369|ref|NP_001172546.1| Os01g0723500 [Oryza sativa Japonica Group]
gi|75159252|sp|Q8S2E6.1|Y1235_ORYSJ RecName: Full=B3 domain-containing protein Os01g0723500
gi|20160548|dbj|BAB89497.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255673640|dbj|BAH91276.1| Os01g0723500 [Oryza sativa Japonica Group]
Length = 402
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFS--HELSDVAHITIPNGYVWQVKLKKEGRK 65
+IPP F K IP + RK E S A + P+G W V +++
Sbjct: 34 KIPPNFCK------------HIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTAEG 81
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+F GW FV+ + V+F Y+ N+ F A ++D TACE
Sbjct: 82 TFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFDRTACE 124
>gi|326525369|dbj|BAK07954.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 664
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 7 PEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKV 66
P+ P+F ++++ + +Q+ IP + K+ E + V ++ P+G W V+L K ++
Sbjct: 188 PKKCPQFFRSLITRSSMEQET-IP-EDCHKYLEECTGVVYLRGPSGNKWPVELAKISGEL 245
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
F GW++F+ + G L++F Y+ S F ++ + CE Y S
Sbjct: 246 CFARGWKEFLRDHRVMYGYLLVFRYDGQSQFSVTVFLPSYCEAPYAS 292
>gi|449448530|ref|XP_004142019.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
[Cucumis sativus]
Length = 409
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR-KVWFDDGWQDFVEAYSTFVGSLV 87
IP K V + LS+ ++ + +G W+V L++ VW ++GW F E Y G L+
Sbjct: 2 IPKKFVEDYGKLLSNSVNLKLSDGKEWRVGLRRATNGAVWLEEGWDKFSEHYCLEFGLLL 61
Query: 88 ---LFEYESNSTFQAHIYDETACEINYPS 113
LF+ +S F+ I+D T E + S
Sbjct: 62 VFKLFDGRRSSNFKVTIFDPTGVETKFIS 90
>gi|399920219|gb|AFP55566.1| transcription factor [Rosa rugosa]
Length = 298
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 4 PSSPEIPPRFVKAVLP-STLRDQKPRIPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKK 61
P+ E P F + L+D K +P VRK+ +++D + +PN G W+++L+
Sbjct: 27 PAVCEEPKGFCLRIQSHEDLKDGKKELPPAAVRKYGDQMADHIFLKVPNCGKHWKIELRT 86
Query: 62 EGRK--VWFDDGWQDFVEAYSTFVGSLVLFEYES-NSTFQAHIYDETACEINYP 112
R+ +W + GW++F Y G L F E ++ F+ I+ EI +P
Sbjct: 87 SPRRDRMWLEKGWEEFASFYLLDQGDLATFSSEGEHAYFRVRIFSWDDMEIYHP 140
>gi|357118657|ref|XP_003561068.1| PREDICTED: uncharacterized protein LOC100828253 [Brachypodium
distachyon]
Length = 364
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K V+P +Q IP+ + +E V + P+G W V+L R +
Sbjct: 123 PNFFKVVMPGHCTEQ-VEIPSSLNGYLENESPGVVSLRGPSGNTWLVELAANSRGLHLAH 181
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
GW++F + + ++F YE S F ++D++ CE
Sbjct: 182 GWKEFFNDHRIQLEYFLVFLYEGQSQFSVRVFDKSGCE 219
>gi|357437995|ref|XP_003589273.1| B3 domain-containing protein [Medicago truncatula]
gi|355478321|gb|AES59524.1| B3 domain-containing protein [Medicago truncatula]
Length = 348
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 18 LPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVE 77
L +T Q+ +P +L + + P+G VW + L V+F DGWQ FV+
Sbjct: 26 LSTTHFQQQLALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTRNDTVYFMDGWQRFVK 85
Query: 78 AYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
+S ++F+Y S F+ I++ E+ CE
Sbjct: 86 DHSLKENDFLVFKYNGESLFEVLIFNGESLCE 117
>gi|125544893|gb|EAY91032.1| hypothetical protein OsI_12638 [Oryza sativa Indica Group]
Length = 519
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + F LS + P G V+ VK+ + K GW+ FV+A+ +L
Sbjct: 43 IPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D CE
Sbjct: 103 FRHIENSRFEVLILDSDGCE 122
>gi|449448370|ref|XP_004141939.1| PREDICTED: putative B3 domain-containing protein At5g66980-like
[Cucumis sativus]
Length = 309
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F K LP++ Q IP V+ F+ + A I + W V L++ V F DGW
Sbjct: 21 FFKVFLPNS-SSQSMSIPPAFVKYFNGRIPSEAIIRDQSRNSWHVTLEELKNIVLFKDGW 79
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
Q+FV+++ G ++F+Y+ + F I+ + C+
Sbjct: 80 QEFVDSHHLKRGYFLVFQYDGSHVFDVKIFGKNGCK 115
>gi|357115797|ref|XP_003559672.1| PREDICTED: B3 domain-containing protein Os03g0619600-like
[Brachypodium distachyon]
Length = 698
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V F+ + + P+G V+ V + K + F GW+ F++A + + ++
Sbjct: 31 IPERFVNHFTRRMPGNIKLEAPDGNVYDVGVTKHRNRTIFQSGWETFLDANNIVHNNSLM 90
Query: 89 FEYESNSTFQAHIYDETACEINYPS 113
F Y S F+ ++D + CE P
Sbjct: 91 FRYLGGSYFKVALFDSSGCEKVVPC 115
>gi|115454149|ref|NP_001050675.1| Os03g0620400 [Oryza sativa Japonica Group]
gi|75149560|sp|Q851W5.1|Y3204_ORYSJ RecName: Full=B3 domain-containing protein Os03g0620400
gi|28201552|gb|AAO34490.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|108709870|gb|ABF97665.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113549146|dbj|BAF12589.1| Os03g0620400 [Oryza sativa Japonica Group]
gi|125587146|gb|EAZ27810.1| hypothetical protein OsJ_11757 [Oryza sativa Japonica Group]
Length = 519
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + F LS + P G V+ VK+ + K GW+ FV+A+ +L
Sbjct: 43 IPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D CE
Sbjct: 103 FRHIENSRFEVLILDSDGCE 122
>gi|414871869|tpg|DAA50426.1| TPA: hypothetical protein ZEAMMB73_725186 [Zea mays]
Length = 337
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K +KF ++ + GY + V++ + ++ F GW+ FV A+ + L++
Sbjct: 42 IPVKFAKKFRGKVERNIKLESLGGYTFDVQVAQNLGRIMFQSGWKSFVSAHDLKMFDLLV 101
Query: 89 FEYESNSTFQAHIYDETACE 108
F+Y+ S + I+D + CE
Sbjct: 102 FKYDGMSRMKVLIFDPSGCE 121
>gi|357115782|ref|XP_003559665.1| PREDICTED: B3 domain-containing protein Os08g0324300-like, partial
[Brachypodium distachyon]
Length = 148
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P + V++ E+ + NGY + V + K KV F GW FVE + +G ++
Sbjct: 40 VPEEFVQRLKGEIRGEIKLETRNGYSYTVGVSKNQEKVVFMAGWGQFVENFDLQMGESII 99
Query: 89 FEYESNSTFQAHIYDETACEI-------NYPSSNEESHTNGEESHH 127
F Y +S F ++D+ E P +E HT+ E+ H
Sbjct: 100 FRYNGSSQFSVVMFDKLGREKALSVIADALPPRIQERHTDATETVH 145
>gi|222625380|gb|EEE59512.1| hypothetical protein OsJ_11764 [Oryza sativa Japonica Group]
Length = 910
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP+K R F +S + +GY + V++ K+ + GW+ FV A+ +G ++
Sbjct: 337 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 396
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
F+Y + Q I+D + CE + S E +
Sbjct: 397 FKYNGDFLLQVLIFDPSGCEKSTSCSMENA 426
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K F ++ + NG V + K K+ GW +F ++ +G ++
Sbjct: 38 IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLV 97
Query: 89 FEYESNSTFQAHIYDETAC 107
F Y NS F+ I+D + C
Sbjct: 98 FRYTGNSQFEVKIFDPSGC 116
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPN+ ++ F ++ + + +G + V++ K K+ GW+ FV A+ +G ++
Sbjct: 629 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 688
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F Y+ S + I+ + CE + S ++ T+ E
Sbjct: 689 FSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGE 724
>gi|326532232|dbj|BAK05045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 372
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKF--SHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
RF K + + ++ RIP+K F + S + P+G W V + K ++F
Sbjct: 21 RFFKLMTQDS--QERIRIPDKFASSFIGQTQSSRGFRLKAPSGETWHVGVTKVADGLFFS 78
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
GW DFV+A+ L++F + NS+F I+D + E
Sbjct: 79 SGWGDFVKAHELQENDLLVFTFSGNSSFDVLIFDASGYE 117
>gi|15236040|ref|NP_194897.1| B3 domain-containing protein REM9 [Arabidopsis thaliana]
gi|75318792|sp|O81778.1|REM9_ARATH RecName: Full=B3 domain-containing protein REM9; AltName:
Full=Auxin response factor 23; AltName: Full=Protein
REPRODUCTIVE MERISTEM 9
gi|3281859|emb|CAA19754.1| putative protein [Arabidopsis thaliana]
gi|7270072|emb|CAB79887.1| putative protein [Arabidopsis thaliana]
gi|332660545|gb|AEE85945.1| B3 domain-containing protein REM9 [Arabidopsis thaliana]
Length = 461
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 39 HELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQ 98
HE V T + W+VK+ EG ++ +GW++FVEA+ +G V+F +E + F
Sbjct: 41 HEGKTVTLRTDASERTWEVKM--EGHRL--TEGWKEFVEAHDLRIGDFVVFRHEGDMVFH 96
Query: 99 AHIYDETACEINYPSSN 115
+ CEI YP S+
Sbjct: 97 VTALGPSCCEIQYPQSS 113
>gi|75149547|sp|Q851V1.1|Y3160_ORYSJ RecName: Full=Putative B3 domain-containing protein Os03g0621600
gi|28201561|gb|AAO34499.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|108709881|gb|ABF97676.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
Group]
Length = 306
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 14 VKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQ 73
V ++P IPN+ + F ++ + +G + V++ K +V GW
Sbjct: 31 VLCLMPIMYMASHKTIPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWA 90
Query: 74 DFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V A+ +G ++F+Y +S + I+D + CE
Sbjct: 91 SYVSAHDLKIGDFLVFKYSGDSQLKTLIFDSSGCE 125
>gi|242038839|ref|XP_002466814.1| hypothetical protein SORBIDRAFT_01g014500 [Sorghum bicolor]
gi|241920668|gb|EER93812.1| hypothetical protein SORBIDRAFT_01g014500 [Sorghum bicolor]
Length = 353
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+PN+ ++F LS + PNG ++ V++ + K+ GW+ FV+A ++
Sbjct: 49 VPNRFAKQFGGRLSGTIKLESPNGNLYDVEVSEHLNKLMLGHGWEAFVDANHIEENDFLI 108
Query: 89 FEYESNSTFQAHIYDETACE 108
F + S F+ I+D CE
Sbjct: 109 FRHIEKSHFEVMIFDTDGCE 128
>gi|302142388|emb|CBI19591.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F + P ++ +IP++ ++ S + P+ W V L ++ + D
Sbjct: 7 PHFFEVFQPDA-SSERLKIPSRFIKHMEGRTSGFVSLVGPSDNTWHVDLIQQNSDLLLHD 65
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
GW FV + G ++F Y+ N F ++D ++CE
Sbjct: 66 GWPVFVRDHCIECGDSLVFRYDGNLHFTVQVFDRSSCE 103
>gi|326524932|dbj|BAK04402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + F ++S + PNG V+ V + + + GW+ F++A ++
Sbjct: 36 IPERFANHFVGKMSRTVKLEGPNGIVYDVGVTEHRNRKVLQSGWEVFLDANEIIEKDSLM 95
Query: 89 FEYESNSTFQAHIYDETACEINYPS-------SNEESHTNGEE 124
F Y +S F+ ++D + CE P S++E TN E
Sbjct: 96 FRYRGSSCFKVAVFDSSGCEKTVPCFGIGGTISDQEPITNSTE 138
>gi|357438003|ref|XP_003589277.1| B3 domain-containing protein [Medicago truncatula]
gi|355478325|gb|AES59528.1| B3 domain-containing protein [Medicago truncatula]
Length = 368
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F + + +T Q+ +P +L + + P+G VW + L V+F DGW
Sbjct: 30 FTQFLQTTTNFQQQLALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTRDNTVYFVDGW 89
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA-CE 108
Q FV +S ++F+Y S F+ I+D + CE
Sbjct: 90 QQFVNDHSLKENDFLVFKYNGESLFEVLIFDGNSFCE 126
>gi|388515865|gb|AFK45994.1| unknown [Medicago truncatula]
Length = 199
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F + + +T Q+ +P +L + + P+G VW + L V+F DGW
Sbjct: 30 FTQFLQTTTNFQQQLALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTRDNTVYFVDGW 89
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA-CE 108
Q FV +S ++F+Y S F+ I+D + CE
Sbjct: 90 QQFVNDHSLKENDFLVFKYNGESLFEVLIFDGNSFCE 126
>gi|20152540|emb|CAD29662.1| putative auxin response factor 23 [Arabidopsis thaliana]
Length = 275
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 39 HELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQ 98
HE V T + W+VK+ EG ++ +GW++FVEA+ +G V+F +E + F
Sbjct: 41 HEGKTVTLRTDASERTWEVKM--EGHRL--TEGWKEFVEAHDLRIGDFVVFRHEGDMVFH 96
Query: 99 AHIYDETACEINYPSSN 115
+ CEI YP S+
Sbjct: 97 VTALGPSCCEIQYPQSS 113
>gi|217075875|gb|ACJ86297.1| unknown [Medicago truncatula]
Length = 199
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F + + +T Q+ +P +L + + P+G VW + L V+F DGW
Sbjct: 30 FTQFLQTTTNFQQQLALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTRDNTVYFVDGW 89
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA-CE 108
Q FV +S ++F+Y S F+ I+D + CE
Sbjct: 90 QQFVNDHSLKENDFLVFKYNGESLFEVLIFDGNSFCE 126
>gi|242038819|ref|XP_002466804.1| hypothetical protein SORBIDRAFT_01g014410 [Sorghum bicolor]
gi|241920658|gb|EER93802.1| hypothetical protein SORBIDRAFT_01g014410 [Sorghum bicolor]
Length = 377
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 4 PSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG 63
P + ++ VL R++ +P+K + F + + + G+ + ++ K
Sbjct: 17 PDDKDGKDKYFFKVLVGEFRERLA-VPDKFEQHFRGLIGNRVKLESRCGHTFDAEVAKNL 75
Query: 64 RKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGE 123
KV GW++FV A+ +G ++F+ + S + I+D + CE P + +H G
Sbjct: 76 GKVVLQTGWKEFVTAHDLNMGDFLVFKCDGTSRLKVFIFDLSCCEKVPPCRVKRNHICGR 135
Query: 124 ESH 126
E+
Sbjct: 136 ETR 138
>gi|357115780|ref|XP_003559664.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing protein
Os03g0622200-like [Brachypodium distachyon]
Length = 642
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE-GRKVWFDDGWQDFVEAYSTFVGSLV 87
IP++ + F+ +S+ ++ P+G W +++ + G V GW++FV A+S G +
Sbjct: 41 IPDEFAKNFNGHISEEVNLKFPSGKSWSIEVASDTGDAVLLRSGWKEFVSAHSIEQGDCL 100
Query: 88 LF-EYESNSTFQAHIYDETACEINYPSSNE 116
LF +Y S+F + D CE P E
Sbjct: 101 LFKKYSGPSSFDVLMLDSNGCEKTSPHPVE 130
>gi|218193330|gb|EEC75757.1| hypothetical protein OsI_12652 [Oryza sativa Indica Group]
gi|222625382|gb|EEE59514.1| hypothetical protein OsJ_11766 [Oryza sativa Japonica Group]
Length = 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPN+ + F ++ + +G + V++ K +V GW +V A+ +G ++
Sbjct: 20 IPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAHDLKIGDFLV 79
Query: 89 FEYESNSTFQAHIYDETACE 108
F+Y +S + I+D + CE
Sbjct: 80 FKYSGDSQLKTLIFDSSGCE 99
>gi|357437991|ref|XP_003589271.1| B3 domain-containing protein [Medicago truncatula]
gi|355478319|gb|AES59522.1| B3 domain-containing protein [Medicago truncatula]
Length = 385
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 25 QKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVG 84
Q+ +P +L + + P+G VW + L G V+F DGW+ FV+ +S
Sbjct: 38 QQLALPKIFSDNLKKKLPENVTLKGPSGVVWNIGLNTRGESVYFVDGWRRFVKDHSLKEN 97
Query: 85 SLVLFEYESNSTFQAHIYD-ETACE 108
++F+Y S F+ I++ E+ CE
Sbjct: 98 DFLVFKYNGESLFEVLIFNGESFCE 122
>gi|357438005|ref|XP_003589278.1| B3 domain-containing protein [Medicago truncatula]
gi|355478326|gb|AES59529.1| B3 domain-containing protein [Medicago truncatula]
Length = 361
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 25 QKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVG 84
Q+ +P ++L + + P+G VW + L V+F DGWQ FV+ +S
Sbjct: 34 QQLALPKTFSDNLKNKLPENVTLKGPSGVVWNIGLTTRDYTVYFTDGWQRFVKDHSLKEN 93
Query: 85 SLVLFEYESNSTFQAHIYD-ETACE 108
++F+Y S F+ I+D + CE
Sbjct: 94 DFLVFKYNGESLFEVLIFDRDNFCE 118
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 12/108 (11%)
Query: 11 PRFVKAVLPSTLRDQKP-RIPNKIVRKFS--HELSDVAHITIPN--GYVWQVK---LKKE 62
P FVK + + + RIP R+FS H D +T+ N G W V K
Sbjct: 247 PYFVKILKNGNVGGSRTLRIP----RRFSAAHLPDDKTEVTLRNSRGECWTVNSVPYAKR 302
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEIN 110
G F GW FV G +FE S+ Q HIY IN
Sbjct: 303 GMLHTFCGGWMSFVRDNGVNFGDTCIFELVSDYVMQVHIYGVGKESIN 350
>gi|242033669|ref|XP_002464229.1| hypothetical protein SORBIDRAFT_01g014595 [Sorghum bicolor]
gi|241918083|gb|EER91227.1| hypothetical protein SORBIDRAFT_01g014595 [Sorghum bicolor]
Length = 472
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P + ++ F+ +LS + PN + V++ + KV F GW+ FVE++ +L
Sbjct: 11 VPKRFLKHFAGKLSGTIKLDSPNRGSYDVEVTEHCNKVVFRHGWRQFVESHDIKENDYLL 70
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
F + S F+ I+D CE + + S
Sbjct: 71 FRHVEGSCFEVLIFDTDGCEKMFSCAGIRS 100
>gi|255548624|ref|XP_002515368.1| conserved hypothetical protein [Ricinus communis]
gi|223545312|gb|EEF46817.1| conserved hypothetical protein [Ricinus communis]
Length = 559
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K +LP + + IP + + A ++ G +W +K+ GR+ F+D
Sbjct: 7 PHFFKPLLPGF--EHEFLIPVSFFKYLKGQECKNAVLSSCPGKLWPIKI--NGRR--FED 60
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
GW++F + VG ++F +E + F ++D + C +YP
Sbjct: 61 GWKEFTRHHDLHVGDFLVFRHEGDMLFHVKVFDSSTCARDYP 102
>gi|224137330|ref|XP_002327099.1| predicted protein [Populus trichocarpa]
gi|222835414|gb|EEE73849.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
+L + Q P IP K ++L + + P+G WQV+L + ++F GW+DFV
Sbjct: 27 ILSAGFDHQLP-IPEKFSNHLKNKLLENVTLKGPSGSTWQVELTTDDNTMFFKHGWEDFV 85
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
+ + L++F+Y S F I+D ++ CE
Sbjct: 86 KDHFLEEKDLLIFKYNGESYFDVLIFDGQSFCE 118
>gi|147855055|emb|CAN82366.1| hypothetical protein VITISV_027617 [Vitis vinifera]
Length = 311
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+IP V+ F+ + + A + G VW V++ + G+ V+F GWQ F+ G L
Sbjct: 25 QIPTAFVKHFNGFVPEKAILRDSVGRVWHVEVGQIGKNVYFLKGWQQFLTDNLVEEGDLF 84
Query: 88 LFEYESNSTFQAHIYDETACE 108
+F+Y+ + F +Y T C+
Sbjct: 85 VFQYDGSYIFDFKLYGTTGCQ 105
>gi|242038843|ref|XP_002466816.1| hypothetical protein SORBIDRAFT_01g014520 [Sorghum bicolor]
gi|241920670|gb|EER93814.1| hypothetical protein SORBIDRAFT_01g014520 [Sorghum bicolor]
Length = 187
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P + ++ F+ +LS + + PN + V + + V F GW FVE++ +L
Sbjct: 47 VPKRFLKHFAGKLSGIIKLESPNRGSYDVGIIEHCNNVVFRHGWGQFVESHHIKENDYLL 106
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
F + S F+ I+D CE +P + S
Sbjct: 107 FRHVEGSCFKVLIFDSDGCEKVFPCAGIRS 136
>gi|357438009|ref|XP_003589280.1| B3 domain-containing protein REM16 [Medicago truncatula]
gi|355478328|gb|AES59531.1| B3 domain-containing protein REM16 [Medicago truncatula]
Length = 423
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 18 LPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVE 77
L +T Q+ +P +L + ++ P+G VW + L + V+F +GWQ FV
Sbjct: 26 LRNTDFQQQLALPKTFSDNLKKKLPENVNLKGPSGVVWNIGLTTKEDTVYFTNGWQGFVN 85
Query: 78 AYSTFVGSLVLFEYESNSTFQAHIY-DETACE 108
+S + F+Y S F+ I+ ET CE
Sbjct: 86 DHSLKESDFLFFKYNGESLFEVLIFHGETLCE 117
>gi|414588001|tpg|DAA38572.1| TPA: hypothetical protein ZEAMMB73_584317 [Zea mays]
Length = 586
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHEL---SDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F++ + S L +K +P + V+ + E S +A I P W+V+LK + ++
Sbjct: 137 PQFIR-IFHSNL-SEKMMLPARFVKDYVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIF 194
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
F GW F++ + G ++L +YE N F+ + + C+ ++ + N
Sbjct: 195 FTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKNQN 242
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 15 KAVLPSTLRDQKPRIPNKIVRKFSHELSD-----VAHITIPNGYVWQVKLKKEGRKVWFD 69
K +LP++ K RI +++ F + A + P G VW+V++ ++G
Sbjct: 19 KVLLPTSF--HKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLG 76
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
GW +F+ A+ +G V+ YE ++D + C
Sbjct: 77 RGWAEFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLC 114
>gi|147855061|emb|CAN82372.1| hypothetical protein VITISV_027623 [Vitis vinifera]
Length = 492
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K + ++ + RIP + S E+S+ A +T P+G W+V + + +
Sbjct: 258 PHFFKIIHGEDVK-RHLRIPPAFMEHLSQEMSNRATLTGPSGSQWRVTVSTDANGTYLQK 316
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
GW+ F++ + + F Y+ N F I+D++ +
Sbjct: 317 GWKQFMKENNLGDSEFLTFRYDGNMQFYVKIFDKSGVQ 354
>gi|326524818|dbj|BAK04345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 710
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 36 KFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNS 95
K+ E + + + P+G W V+L K ++ F GW++F+ + G L++F Y+ S
Sbjct: 196 KYLEECTGMVSLRGPSGNKWSVELTKISGELCFARGWKEFLYDHRVRYGYLLVFRYDGQS 255
Query: 96 TFQAHIYDETACEINYPSSNEESHTN----GEE 124
F ++ ++CE Y S + H + GEE
Sbjct: 256 QFSVTVFLPSSCEAPYASLAQPQHKDVDVAGEE 288
>gi|50428694|gb|AAT77045.1| putative transcription factor(auxin response factor) [Oryza sativa
Japonica Group]
Length = 207
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP++ V F ++ + PNG ++ V++ + K GW+ FV+A+ VG +L
Sbjct: 43 IPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D E
Sbjct: 103 FRHIENSCFEVMILDSDGSE 122
>gi|222625383|gb|EEE59515.1| hypothetical protein OsJ_11767 [Oryza sativa Japonica Group]
Length = 428
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLK-KEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P++ F+ +S+V ++ P+G W + + + ++ GW++FV+A +
Sbjct: 46 VPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDCL 105
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
LF Y S+F I+D + CE P E EE
Sbjct: 106 LFRYSGVSSFDVLIFDPSGCEKASPHFVENRGFGREE 142
>gi|242038817|ref|XP_002466803.1| hypothetical protein SORBIDRAFT_01g014400 [Sorghum bicolor]
gi|241920657|gb|EER93801.1| hypothetical protein SORBIDRAFT_01g014400 [Sorghum bicolor]
Length = 517
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K + F + + + G+ + V++ K KV GW++FV A+ +G ++
Sbjct: 246 VPEKFEQHFRGLIGNRVKLESRCGHTFDVEVAKNLGKVVLQTGWKEFVTAHDLNMGDFLV 305
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEES 125
F+ + S F+ I+D + CE P + +H G E+
Sbjct: 306 FKCDKTSRFKVFIFDLSCCEKVPPCLVKRNHICGRET 342
>gi|218193331|gb|EEC75758.1| hypothetical protein OsI_12653 [Oryza sativa Indica Group]
Length = 381
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-EGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P++ F+ +S+V ++ P+G W + + + ++ GW++FV+A +
Sbjct: 46 VPSRFANNFNGHISEVVNLKSPSGKTWSIGVANSDTGELVLRSGWKEFVDANGVQENDCL 105
Query: 88 LFEYESNSTFQAHIYDETACEINYP 112
LF Y S+F I+D + CE P
Sbjct: 106 LFRYSGVSSFDVLIFDPSGCEKATP 130
>gi|122236730|sp|Q10GP0.1|Y3198_ORYSJ RecName: Full=Putative B3 domain-containing protein Os03g0619850
gi|108709866|gb|ABF97661.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
Group]
Length = 253
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP++ V F ++ + PNG ++ V++ + K GW+ FV+A+ VG +L
Sbjct: 43 IPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D E
Sbjct: 103 FRHIENSCFEVMILDSDGSE 122
>gi|222625376|gb|EEE59508.1| hypothetical protein OsJ_11754 [Oryza sativa Japonica Group]
Length = 254
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP++ V F ++ + PNG ++ V++ + K GW+ FV+A+ VG +L
Sbjct: 43 IPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D E
Sbjct: 103 FRHIENSCFEVMILDSDGSE 122
>gi|242084006|ref|XP_002442428.1| hypothetical protein SORBIDRAFT_08g019920 [Sorghum bicolor]
gi|241943121|gb|EES16266.1| hypothetical protein SORBIDRAFT_08g019920 [Sorghum bicolor]
Length = 362
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
IP K +KF ++++ + P+ W + ++K ++F GW+DFV+A+ L+
Sbjct: 47 IPEKFAKKFRGQITEEVQLKSPSSAETWHISVEKCDDVLFFISGWEDFVKAHELQENDLL 106
Query: 88 LFEYESNSTFQAHIYDETACE 108
LF S+F+ +++ + CE
Sbjct: 107 LFTCCGKSSFEVLVFEASGCE 127
>gi|413933658|gb|AFW68209.1| hypothetical protein ZEAMMB73_726646 [Zea mays]
Length = 333
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE-GRKVWFDDGWQDFVEAYSTFVGSLV 87
IP K + F+ ++ + GY + V++ K+ GR V GW+ FV A+ +
Sbjct: 43 IPGKFAKHFADKVEGSITLESLGGYTFDVQVAKDLGRVVLQSAGWKSFVSAHYLKKMDFL 102
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHTNG 122
+F+Y+ S + I+D + CE PS E+ ++G
Sbjct: 103 VFKYDGMSRMKVLIFDPSGCEKVPPSFVAENASSG 137
>gi|357468105|ref|XP_003604337.1| hypothetical protein MTR_4g009730 [Medicago truncatula]
gi|355505392|gb|AES86534.1| hypothetical protein MTR_4g009730 [Medicago truncatula]
Length = 398
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 50 PNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEI 109
PN +++VK+ K+ KV+F DGW + Y +G+ V Y ++ F I D + E+
Sbjct: 241 PNKNMFEVKVHKKNGKVYFRDGWIGLKDFYKIGLGAWVTLTYIESNLFHMTIKDRSGVEV 300
Query: 110 NYPSS 114
+YP++
Sbjct: 301 DYPNN 305
>gi|115454161|ref|NP_001050681.1| Os03g0622100 [Oryza sativa Japonica Group]
gi|122246888|sp|Q10GM4.1|Y3221_ORYSJ RecName: Full=B3 domain-containing protein Os03g0622100
gi|108709882|gb|ABF97677.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113549152|dbj|BAF12595.1| Os03g0622100 [Oryza sativa Japonica Group]
gi|215693360|dbj|BAG88742.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 382
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLK-KEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P++ F+ +S+V ++ P+G W + + + ++ GW++FV+A +
Sbjct: 46 VPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDCL 105
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
LF Y S+F I+D + CE P E EE
Sbjct: 106 LFRYSGVSSFDVLIFDPSGCEKASPHFVENRGFGREE 142
>gi|356541131|ref|XP_003539036.1| PREDICTED: B3 domain-containing protein At5g60130-like [Glycine
max]
Length = 336
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPN--GYVWQVKLKKE 62
+ E P F K LP ++ IPN VR + + + N G VWQVK +
Sbjct: 3 TGAERYPDFFKVFLPER-HSERMLIPNAFVRLPQSQGRIPEDVILRNISGRVWQVKTRYI 61
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
G K++FDDGW F E ++F+++ ++ F+ I + T C+
Sbjct: 62 GEKLYFDDGWNAFHEENCLGHADFLVFKHDRSNEFKVLILESSTQCQ 108
>gi|357437997|ref|XP_003589274.1| B3 domain-containing protein [Medicago truncatula]
gi|355478322|gb|AES59525.1| B3 domain-containing protein [Medicago truncatula]
Length = 628
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
RF + + P+ L +Q+ +P ++L + P+G VW + L ++ DG
Sbjct: 25 RFTQFLQPTHL-EQQLALPKTFSDNLKNKLPANVTLKGPSGVVWDIGLTTRDDTIYSTDG 83
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIY-DETACE 108
WQ FV+ +S ++F+Y S F+ I+ E+ CE
Sbjct: 84 WQQFVKDHSLKQNDFLVFKYNGESLFEVLIFHGESFCE 121
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
+Q+ +P +L + + P+G VW + L V+F DGW+ F++ +S
Sbjct: 193 EQQLALPKTFSDNLKKKLPENVTLKGPSGVVWNIGLTTRDDIVYFVDGWKRFIKDHSLKQ 252
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACE 108
++F+Y S F+ I+D ++ CE
Sbjct: 253 NDFLVFKYNGKSLFEVLIFDGDSFCE 278
>gi|297825443|ref|XP_002880604.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326443|gb|EFH56863.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1609
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 35 RKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESN 94
+K + SD + IT W+VK+ +G+++ DGW++F A+ +G +V+F ES+
Sbjct: 1155 QKMAELRSDASKIT------WKVKI--DGQRL--TDGWKEFALAHDLRIGDIVIFRQESD 1204
Query: 95 STFQAHIYDETACEINYPSSNEESHTNGEESHH 127
+F + + CEI Y S +E TN E+ +
Sbjct: 1205 LSFHVTLLGPSCCEIQYGSCLDE-ETNLEKKKN 1236
>gi|115454147|ref|NP_001050674.1| Os03g0619600 [Oryza sativa Japonica Group]
gi|75120137|sp|Q6AV22.1|Y3196_ORYSJ RecName: Full=B3 domain-containing protein Os03g0619600
gi|50428689|gb|AAT77040.1| putative transcirption factor(auxin response factor) [Oryza sativa
Japonica Group]
gi|108709864|gb|ABF97659.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113549145|dbj|BAF12588.1| Os03g0619600 [Oryza sativa Japonica Group]
gi|215767409|dbj|BAG99637.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625374|gb|EEE59506.1| hypothetical protein OsJ_11751 [Oryza sativa Japonica Group]
Length = 536
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K V F + S + PNG ++ V++ K K GW+ FV+A+ +L
Sbjct: 43 MPCKFVNHFGGDFSGTIKLQSPNGILYVVEVTKCKNKTVLRCGWEAFVDAHHIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F NS F+ I+D CE
Sbjct: 103 FRCVENSRFEVLIFDSDDCE 122
>gi|28201564|gb|AAO34502.1| putative auxin response factor [Oryza sativa Japonica Group]
Length = 750
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLK-KEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P++ F+ +S+V ++ P+G W + + + ++ GW++FV+A +
Sbjct: 46 VPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDCL 105
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
LF Y S+F I+D + CE P E EE
Sbjct: 106 LFRYSGVSSFDVLIFDPSGCEKASPHFVENRGFGREE 142
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 16 AVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKL-KKEGRKVWFDDGWQD 74
A+ P+T +P + F+ +S+ ++ P+G W + + + ++ GW++
Sbjct: 417 AIWPTT------TVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKE 470
Query: 75 FVEAYSTFVGSLVLFEYES-NSTFQAHIYDETACEINYP 112
FV+ G +LF Y +S+F I+D + CE P
Sbjct: 471 FVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASP 509
>gi|242083996|ref|XP_002442423.1| hypothetical protein SORBIDRAFT_08g019880 [Sorghum bicolor]
gi|241943116|gb|EES16261.1| hypothetical protein SORBIDRAFT_08g019880 [Sorghum bicolor]
Length = 505
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR-KVWFDDGWQDFVEAYSTFVGSLV 87
IP K V ++S+ + +P+G + +++ +E + ++ GW +F AY L+
Sbjct: 4 IPKKFVANIREQMSEQVTLKVPDGKTYTIEVAEEQQNELVLRSGWPEFASAYELEQFDLL 63
Query: 88 LFEYESNSTFQAHIYDETACE 108
+F+ NS + I+D + CE
Sbjct: 64 VFKNSGNSHLKVRIFDRSGCE 84
>gi|218192320|gb|EEC74747.1| hypothetical protein OsI_10501 [Oryza sativa Indica Group]
Length = 271
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFS-HELSDVAHITIPNGYVWQVKLKKEGRKVW---- 67
F + +LP + + K ++P K R+ EL + ++++ EGR+ W
Sbjct: 15 FFRIILPGSSK-TKLKLPYKFARELGDRELREA-----------RLRVAGEGRRPWDVKV 62
Query: 68 FDD----------GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
FDD GWQ+F A+ G ++F Y+ + F ++DET C +Y
Sbjct: 63 FDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDETMCRRDY 116
>gi|218193320|gb|EEC75747.1| hypothetical protein OsI_12632 [Oryza sativa Indica Group]
Length = 510
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K V F + S + PNG ++ V++ K K GW+ FV+A+ +L
Sbjct: 43 MPCKFVNHFGGDFSGTIKLQSPNGILYVVEVTKCKNKTVLRCGWEAFVDAHHIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F NS F+ I+D CE
Sbjct: 103 FRRVENSRFEVLIFDSDDCE 122
>gi|357115784|ref|XP_003559666.1| PREDICTED: putative B3 domain-containing protein Os08g0325100-like
[Brachypodium distachyon]
Length = 451
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P + V++ E+ + NGY + + + K+ ++ F GW FVE + +G ++
Sbjct: 40 VPQEFVQRLKGEIRGEIKLETRNGYSYTIGVSKDQEELVFMAGWGKFVENFDLQMGESII 99
Query: 89 FEYESNSTFQAHIYDE-------TACEINYPSSNEESHTNGEES 125
F Y +S F I+D+ + E P E HT+ E+
Sbjct: 100 FRYNGSSQFSVTIFDKLGREKALSVIEDALPPHVLERHTDATEN 143
>gi|125585373|gb|EAZ26037.1| hypothetical protein OsJ_09891 [Oryza sativa Japonica Group]
Length = 271
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFS-HELSDVAHITIPNGYVWQVKLKKEGRKVW---- 67
F + +LP + + K ++P K R+ EL + ++++ EGR+ W
Sbjct: 15 FFRIILPGSSK-TKLKLPYKFARELGDRELREA-----------RLRVAGEGRRPWDVKV 62
Query: 68 FDD----------GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
FDD GWQ+F A+ G ++F Y+ + F ++DET C +Y
Sbjct: 63 FDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDY 116
>gi|357437985|ref|XP_003589268.1| B3 domain-containing protein [Medicago truncatula]
gi|355478316|gb|AES59519.1| B3 domain-containing protein [Medicago truncatula]
Length = 495
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 15 KAVLPSTLRDQ-KPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQ 73
+ LP T D K ++P + I P+G VW + L G V+F + WQ
Sbjct: 40 QLALPKTFSDNLKKKLPENVT------------IKCPSGIVWNIGLTARGDTVYFTNSWQ 87
Query: 74 DFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA-CE 108
FV+ +S ++F+Y S F+ I++ + CE
Sbjct: 88 QFVKDHSLKENDFLVFKYNGESHFEVLIFNGNSFCE 123
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
+L T ++ +P + +L + + P+G W ++L V+F DGWQ F+
Sbjct: 159 LLVHTNFERHLALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFM 218
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
+S ++ +Y S F+ I+D E+ CE
Sbjct: 219 NDHSLKANDFLVCKYNGESHFEVLIFDGESFCE 251
>gi|6862926|gb|AAF30315.1|AC018907_15 hypothetical protein [Arabidopsis thaliana]
Length = 175
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
+S ++ PRF L + IP L A +T G VW+V + +
Sbjct: 2 ASGDVLPRFYTVFLSCVSSNSLKLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKRE 61
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+ GW++FV G + F ++ +++ IY +C+
Sbjct: 62 QVYLARGWENFVADNELKDGEFLTFVFDGYKSYEVSIYGRGSCK 105
>gi|115451507|ref|NP_001049354.1| Os03g0212300 [Oryza sativa Japonica Group]
gi|122247382|sp|Q10Q26.1|Y3123_ORYSJ RecName: Full=B3 domain-containing protein Os03g0212300
gi|108706813|gb|ABF94608.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547825|dbj|BAF11268.1| Os03g0212300 [Oryza sativa Japonica Group]
gi|215678524|dbj|BAG92179.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 270
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFS-HELSDVAHITIPNGYVWQVKLKKEGRKVW---- 67
F + +LP + + K ++P K R+ EL + ++++ EGR+ W
Sbjct: 15 FFRIILPGSSK-TKLKLPYKFARELGDRELREA-----------RLRVAGEGRRPWDVKV 62
Query: 68 FDD----------GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
FDD GWQ+F A+ G ++F Y+ + F ++DET C +Y
Sbjct: 63 FDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDY 116
>gi|357437989|ref|XP_003589270.1| B3 domain-containing protein [Medicago truncatula]
gi|355478318|gb|AES59521.1| B3 domain-containing protein [Medicago truncatula]
Length = 923
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F++ + +T Q+ +P +L + P+G VW V L ++F +GW
Sbjct: 25 FIQFLQTTTDFQQQLALPKTFSDNLKKKLPGNVTLKGPSGVVWNVGLTARDDTIYFTNGW 84
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIY-DETACE 108
Q FV+ +S ++F+Y S F+ I+ ++ CE
Sbjct: 85 QRFVKDHSLKENDFLVFKYNGESLFEVLIFHGDSFCE 121
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
+LP + Q+ +P + +L + + P G W++ L V+F +GWQ FV
Sbjct: 187 LLPEDFK-QQLALPKTFSDNLNKKLPENVTLKGPGGVAWKIGLITRDDTVYFLNGWQRFV 245
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYD-ETACEINYPSSNEESHTNGEESH 126
+S ++F Y S F I+D E+ CE E S+ G+ SH
Sbjct: 246 NDHSLKDNDFLVFNYNGESHFDVLIFDGESFCE------KEASYFVGKCSH 290
>gi|115489370|ref|NP_001067172.1| Os12g0592300 [Oryza sativa Japonica Group]
gi|77556363|gb|ABA99159.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113649679|dbj|BAF30191.1| Os12g0592300 [Oryza sativa Japonica Group]
gi|125537241|gb|EAY83729.1| hypothetical protein OsI_38948 [Oryza sativa Indica Group]
gi|125579924|gb|EAZ21070.1| hypothetical protein OsJ_36713 [Oryza sativa Japonica Group]
Length = 366
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K+ +FS +++ ++ P+G W+V ++K ++ GW+DF +A+ L+
Sbjct: 42 IPEKVADRFSGQITKGFNLKAPSGETWRVSVEKVADELILMSGWEDFAKAHELQENDLLF 101
Query: 89 FEYESNS----TFQAHIYDETACE 108
F +F I+D + CE
Sbjct: 102 FTCNGRCNGSFSFDVLIFDASGCE 125
>gi|297733628|emb|CBI14875.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K R S + + H+ +G W++ + + F GW F + +G V+
Sbjct: 47 LPPKFARTVSALVDEKTHLEDSSGRQWEITVSNLNGSLAFHQGWHAFALDHRLEIGDFVV 106
Query: 89 FEYESNSTFQAHIYDETACE 108
F Y S F IYD T CE
Sbjct: 107 FHYIMGSHFITQIYDRTGCE 126
>gi|239977781|sp|Q2QMT2.2|Y1223_ORYSJ RecName: Full=B3 domain-containing protein Os12g0592300
Length = 358
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K+ +FS +++ ++ P+G W+V ++K ++ GW+DF +A+ L+
Sbjct: 42 IPEKVADRFSGQITKGFNLKAPSGETWRVSVEKVADELILMSGWEDFAKAHELQENDLLF 101
Query: 89 FEYESNS----TFQAHIYDETACE 108
F +F I+D + CE
Sbjct: 102 FTCNGRCNGSFSFDVLIFDASGCE 125
>gi|75323091|sp|Q6AV21.1|Y3982_ORYSJ RecName: Full=B3 domain-containing protein Os03g0619800
gi|50428691|gb|AAT77042.1| putative transcription factor(auxin response factor) [Oryza sativa
Japonica Group]
gi|108709865|gb|ABF97660.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|125587142|gb|EAZ27806.1| hypothetical protein OsJ_11753 [Oryza sativa Japonica Group]
Length = 536
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P++ V F ++ + PNG ++ V++ + K GW+ FV+A++ G +L
Sbjct: 43 MPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS ++ I D CE
Sbjct: 103 FRHIENSRYEVLILDSDDCE 122
>gi|125544889|gb|EAY91028.1| hypothetical protein OsI_12633 [Oryza sativa Indica Group]
Length = 536
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P++ V F ++ + PNG ++ V++ + K GW+ FV+A++ G +L
Sbjct: 43 MPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS ++ I D CE
Sbjct: 103 FRHIENSRYEVLILDSDDCE 122
>gi|242087415|ref|XP_002439540.1| hypothetical protein SORBIDRAFT_09g011040 [Sorghum bicolor]
gi|241944825|gb|EES17970.1| hypothetical protein SORBIDRAFT_09g011040 [Sorghum bicolor]
Length = 245
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 1 PISPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLK 60
P + ++ +P RFVK + ++ S A I P G WQ + K
Sbjct: 109 PAAEAAKRLPARFVKGYITKEWQN-----------------SQTAIIVSPLGKCWQFEFK 151
Query: 61 KEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHT 120
+ ++F W F++ + G ++L YE N + + C+ + + N E
Sbjct: 152 NDQSGIFFTGRWSQFLDFHGISKGEVLLLRYEGNMVSKFKAFGLNGCQKVFKNQNAEIKQ 211
Query: 121 NGEESH 126
N E+
Sbjct: 212 NTEKQQ 217
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSD-----VAHITIPNGYVWQVKLKKEGRKVWFDDG 71
VL T K RI N++ F + A + P G VW VK+ ++G + G
Sbjct: 7 VLLHTSSSHKLRISNELAGCFDTGEGEGAPEPTAIVVSPFGTVWPVKVGQDGDGAFLGRG 66
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
W +F+ + +G V+ +E T ++D + C
Sbjct: 67 WAEFLPVHGVGLGWFVVLWHEGGGTLTVKMFDTSLC 102
>gi|242038827|ref|XP_002466808.1| hypothetical protein SORBIDRAFT_01g014450 [Sorghum bicolor]
gi|241920662|gb|EER93806.1| hypothetical protein SORBIDRAFT_01g014450 [Sorghum bicolor]
Length = 327
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK R+F ++ + NG V + + K+ + GW+ FV + + ++
Sbjct: 31 IPNKFARRFGDKIPGKIKLKACNGCSCTVVVTRYPDKLVLEAGWEAFVSTHDIRLCDFLV 90
Query: 89 FEYESNSTFQAHIYDETAC 107
F Y N F+ I+D + C
Sbjct: 91 FRYNGNFQFEVLIFDPSCC 109
>gi|297722361|ref|NP_001173544.1| Os03g0619825 [Oryza sativa Japonica Group]
gi|255674711|dbj|BAH92272.1| Os03g0619825 [Oryza sativa Japonica Group]
Length = 300
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P++ V F ++ + PNG ++ V++ + K GW+ FV+A++ G +L
Sbjct: 43 MPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS ++ I D CE
Sbjct: 103 FRHIENSRYEVLILDSDDCE 122
>gi|356545375|ref|XP_003541119.1| PREDICTED: putative B3 domain-containing protein At5g66980-like
[Glycine max]
Length = 232
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVR--KFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
P F K LP ++ IPN VR + + + + +G VW VK + G K++F
Sbjct: 9 PDFFKVFLPER-HSERMLIPNAFVRLPQLQGRIPEDVILRNASGRVWHVKTRYVGEKLYF 67
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
DDGW+ F + ++F+ E + F I T C+
Sbjct: 68 DDGWRAFHQENCLGQADFLVFKLERRNEFVVLILQLSTQCQ 108
>gi|168066139|ref|XP_001785000.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663417|gb|EDQ50181.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKL---KKEGRKVW 67
P F+K + ++ K ++P VR + + P+ W V++ + R +
Sbjct: 90 PSFLKKMTEVAIK-SKLQMPVSFVRNSVTRIGKTIILEGPSTNKWSVEVWPGSVQKRSLE 148
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
F DGWQ FV+ ++ +G + F S+S FQ +YDE+ +
Sbjct: 149 FRDGWQKFVKDHNLQIGDQLCFTLTSDSHFQVMVYDESGSQ 189
>gi|255646300|gb|ACU23634.1| unknown [Glycine max]
Length = 202
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVR--KFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
P F K LP ++ IPN VR + + + + +G VW VK + G K++F
Sbjct: 9 PDFFKVFLPER-HSERMLIPNAFVRLPQLQGRIPEDVILRNASGRVWHVKTRYVGEKLYF 67
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
DDGW+ F + ++F+ E + F I T C+
Sbjct: 68 DDGWRAFHQENCLGQADFLVFKLERRNEFVVLILQLSTQCQ 108
>gi|168012224|ref|XP_001758802.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689939|gb|EDQ76308.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 426
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVK-----LKKEGRK 65
P F+K + T+ +IP VR + V + P+ W V+ L++ G
Sbjct: 32 PSFIKTMTELTITSVL-QIPASFVRCSDSRIGKVVTLEGPSKENWSVEVGPGTLQRSG-- 88
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTN 121
+ F DGWQ FV ++ +G + F +S S FQ +YDE+ P +N + N
Sbjct: 89 LEFRDGWQKFVADHNVQIGDHLFFTLKSYSRFQVMVYDESGS----PKANATAARN 140
>gi|357438007|ref|XP_003589279.1| B3 domain-containing protein [Medicago truncatula]
gi|355478327|gb|AES59530.1| B3 domain-containing protein [Medicago truncatula]
Length = 399
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 18 LPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVE 77
L +T Q+ +P +L + + P+G VW + L V+F GW+ FV+
Sbjct: 27 LQTTDFQQQLALPKTFSDNLKKKLPENVTLKGPSGAVWDIGLTTRDNTVYFVGGWERFVK 86
Query: 78 AYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
+S ++F+Y S F+ I+D + CE
Sbjct: 87 DHSLKENDFLVFKYNGESLFEVLIFDGDNFCE 118
>gi|75149559|sp|Q851W4.1|Y3205_ORYSJ RecName: Full=B3 domain-containing protein Os03g0620500
gi|28201557|gb|AAO34495.1| putative auxin response factor [Oryza sativa Japonica Group]
Length = 545
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + +F ++S + P G V+ VK+ K K GW+ FV+A+ +L
Sbjct: 43 IPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEE 117
F + NS + + + A I+ SS +
Sbjct: 103 FRHIKNSRRASGVQERNADPIDVSSSTHD 131
>gi|222625377|gb|EEE59509.1| hypothetical protein OsJ_11758 [Oryza sativa Japonica Group]
Length = 542
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + +F ++S + P G V+ VK+ K K GW+ FV+A+ +L
Sbjct: 43 IPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEE 117
F + NS + + + A I+ SS +
Sbjct: 103 FRHIKNSRRASGVQERNADPIDVSSSTHD 131
>gi|297833364|ref|XP_002884564.1| hypothetical protein ARALYDRAFT_317484 [Arabidopsis lyrata subsp.
lyrata]
gi|297330404|gb|EFH60823.1| hypothetical protein ARALYDRAFT_317484 [Arabidopsis lyrata subsp.
lyrata]
Length = 175
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 45/104 (43%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
+S ++ PRF L + + IP L A +T G W+V + +
Sbjct: 2 ASGDVLPRFYTVFLSNVSSNSLKLIPRVYYEHLPRWLPKTAILTGTGGRFWKVAMMSKRE 61
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+F+ GW +FV G + F ++ + +++ IY C+
Sbjct: 62 QVYFEQGWGNFVADNDLKDGEFLTFVFDGHKSYEVSIYGRGECK 105
>gi|359475406|ref|XP_003631680.1| PREDICTED: B3 domain-containing protein Os11g0197600-like [Vitis
vinifera]
Length = 273
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K + ++ + RIP ++ + ++SD A +T +G W V + K + +D
Sbjct: 31 PHFFKIIRGEDVK-KHLRIPPAFIKHLAGDISDRATLTCSSGGHWGVTVWKNPDGTYLED 89
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GW++F+ + ++F Y+ + F I+++ + + P S+
Sbjct: 90 GWKEFMRENNLGDDEFLVFIYDGDMRFHVKIFEKNGVKRSAPISD 134
>gi|116831184|gb|ABK28546.1| unknown [Arabidopsis thaliana]
Length = 175
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
+S ++ PRF L S + IP L A +T G VW+V + +
Sbjct: 2 ASGDVLPRFYTVFL-SCVSSNSLLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKRE 60
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+ GW++FV G + F ++ +++ IY +C+
Sbjct: 61 QVYLARGWENFVADNELKDGEFLTFVFDGYKSYEVSIYGRGSCK 104
>gi|122203299|sp|Q2QMT5.1|Y1209_ORYSJ RecName: Full=B3 domain-containing protein LOC_Os12g40090
gi|77556360|gb|ABA99156.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
Group]
gi|125579923|gb|EAZ21069.1| hypothetical protein OsJ_36712 [Oryza sativa Japonica Group]
Length = 334
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K+ FS +++ ++ P+G W+V + K ++ GW+DF +A+ L+
Sbjct: 22 IPEKVAEIFSGQITKGFNLKSPSGETWRVGVAKVADELILKSGWEDFAKAHELQENDLLF 81
Query: 89 FEY----ESNSTFQAHIYDETACE 108
F + +F I+D + CE
Sbjct: 82 FTCNGHGNGSCSFDVLIFDASGCE 105
>gi|297741371|emb|CBI32502.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIP ++ + ++SD A +T +G W V + K + +DGW++F+ + +
Sbjct: 5 RIPPAFIKHLAGDISDRATLTCSSGGHWGVTVWKNPDGTYLEDGWKEFMRENNLGDDEFL 64
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSN 115
+F Y+ + F I+++ + + P S+
Sbjct: 65 VFIYDGDMRFHVKIFEKNGVKRSAPISD 92
>gi|145338178|ref|NP_187273.2| AP2/B3 domain-containing protein [Arabidopsis thaliana]
gi|122180201|sp|Q1PES7.1|Y3622_ARATH RecName: Full=B3 domain-containing protein At3g06220
gi|91806387|gb|ABE65921.1| transcriptional factor B3 family protein [Arabidopsis thaliana]
gi|225898623|dbj|BAH30442.1| hypothetical protein [Arabidopsis thaliana]
gi|332640841|gb|AEE74362.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
Length = 174
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
+S ++ PRF L S + IP L A +T G VW+V + +
Sbjct: 2 ASGDVLPRFYTVFL-SCVSSNSLLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKRE 60
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+ GW++FV G + F ++ +++ IY +C+
Sbjct: 61 QVYLARGWENFVADNELKDGEFLTFVFDGYKSYEVSIYGRGSCK 104
>gi|356534303|ref|XP_003535696.1| PREDICTED: uncharacterized protein LOC100306715 [Glycine max]
Length = 963
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVK-LKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
IPNK + + LS+ + P+G W+V K +G ++W + GW++F YS G +
Sbjct: 2 IPNKFTKIYGGNLSNPVFLKAPDGIKWKVYWTKDDGGRIWLNKGWKEFATHYSLRYGHMH 61
Query: 88 LF 89
F
Sbjct: 62 RF 63
>gi|125537239|gb|EAY83727.1| hypothetical protein OsI_38946 [Oryza sativa Indica Group]
Length = 354
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K+ FS +++ ++ P+G W+V + K ++ GW+DF +A+ L+
Sbjct: 42 IPEKVAEIFSGQITKGFNLKSPSGETWRVGVAKVADELILKSGWEDFAKAHELQENDLLF 101
Query: 89 FEY----ESNSTFQAHIYDETACE 108
F + +F I+D + CE
Sbjct: 102 FTCNGHGNGSCSFDVLIFDASGCE 125
>gi|357130862|ref|XP_003567063.1| PREDICTED: B3 domain-containing protein Os03g0120900-like
[Brachypodium distachyon]
Length = 474
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 23 RDQKPRIPNKIVRKFSHELSDVAHITIPNGY--VWQVKLKKEGRKVWFDDGWQDFVEAYS 80
RD IP+ R+ ++ A + + + W V+L+K R+V+ GW FVE S
Sbjct: 27 RDFLCHIPDVGGRRSDTSVASSAQVMLKHSKWKTWPVELEKVDRRVFMTTGWSRFVEDNS 86
Query: 81 TFVGSLVLFEYESNSTFQAHIYDETACE--INYPSSNEESHTNGE 123
+LF Y+ + F ++ ACE I Y S ++ N E
Sbjct: 87 LREYEFLLFRYDMDLHFMVSVFGRNACEKAIRYSGSGAQATGNLE 131
>gi|295913534|gb|ADG58015.1| transcription factor [Lycoris longituba]
Length = 228
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 25 QKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYST 81
Q RIP K ELSD+ + P+G +W V L + +V GW++FVEA++
Sbjct: 42 QHLRIPKKFTAYCKRELSDIVDLKGPSGRIWPVGLTRTDDEVILKSGWKEFVEAHNA 98
>gi|242038831|ref|XP_002466810.1| hypothetical protein SORBIDRAFT_01g014460 [Sorghum bicolor]
gi|241920664|gb|EER93808.1| hypothetical protein SORBIDRAFT_01g014460 [Sorghum bicolor]
Length = 276
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P + + +F E+S+ I P+G V+ VK K K+ GW+ FV+A+ +L
Sbjct: 43 MPVRFMNQFGGEISESMDIESPDGSVYAVKGIKYMNKMLPQCGWKAFVDAHPIDQNDSLL 102
Query: 89 FEYESNSTFQAHIYDETACEINYPSSN 115
F++ + F+ I D CE +P +
Sbjct: 103 FQHIEKARFKVLIIDPDGCEKVFPCNG 129
>gi|224063563|ref|XP_002301206.1| predicted protein [Populus trichocarpa]
gi|222842932|gb|EEE80479.1| predicted protein [Populus trichocarpa]
Length = 145
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K +L + + P+G WQV+L + ++F +GW++FV+ + L++
Sbjct: 40 IPEKFSNHLKKKLPENVFLKGPSGGTWQVELTTDDDTMFFKNGWEEFVKDH-FLEKDLLI 98
Query: 89 FEYESNSTFQAHIYD-ETACE 108
F+Y S F+ I+D ++ CE
Sbjct: 99 FKYNRESCFEVLIFDGQSLCE 119
>gi|242070423|ref|XP_002450488.1| hypothetical protein SORBIDRAFT_05g006090 [Sorghum bicolor]
gi|241936331|gb|EES09476.1| hypothetical protein SORBIDRAFT_05g006090 [Sorghum bicolor]
Length = 443
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 9 IPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
+ P+F K P L ++ +IP + + + + P+G WQ L E +F
Sbjct: 55 VCPQFFKVFFPE-LSGERLKIPPMFRQHLQEQPTGPVSLRGPSGKKWQATLASESEAWFF 113
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
+ GW++FV +S G ++F Y+ S F ++
Sbjct: 114 EQGWKEFVTDHSINKGYFLVFTYDGPSQFSVVVF 147
>gi|30689117|ref|NP_194896.2| B3 domain-containing protein REM8 [Arabidopsis thaliana]
gi|75329151|sp|Q8H2D1.1|REM8_ARATH RecName: Full=B3 domain-containing protein REM8; AltName:
Full=Auxin response factor 24; AltName: Full=Protein
REPRODUCTIVE MERISTEM 8
gi|24817267|emb|CAD56214.1| putative auxin response factor 24 [Arabidopsis thaliana]
gi|332660544|gb|AEE85944.1| B3 domain-containing protein REM8 [Arabidopsis thaliana]
Length = 462
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
F K +LP R+ IP K + HE V + W+VK+ +G ++
Sbjct: 14 FFKPLLPGFQRN--LNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKM--DGNRL--T 67
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
+GW++FVEA+ + V+F +E + F + CEI YP S
Sbjct: 68 EGWKEFVEAHDLRIRDFVVFRHEGDMVFHVTALGPSCCEIQYPQS 112
>gi|297739427|emb|CBI29609.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
S P P F LP D + IP + F+ + + A + +G VW V++ G+
Sbjct: 3 SPPRELPEFCNVYLPEYSSD-RLLIPTAFLGHFNGVVPEKAILREFSGRVWLVEVGLIGK 61
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
V+F +GWQ F S G ++F Y+ + F ++ CE + N++ +E
Sbjct: 62 DVYFLNGWQRFRTDNSLEEGVFLVFRYDGSHIFDFKLFGRNQCE-KIETDNDQLQAQMQE 120
Query: 125 SH 126
+
Sbjct: 121 TE 122
>gi|414871868|tpg|DAA50425.1| TPA: hypothetical protein ZEAMMB73_716134 [Zea mays]
Length = 332
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K + F ++ + G + V++ + ++ F GW+ FV A+ + L++
Sbjct: 42 IPVKFAKNFRGKIERSITLESLGGCTFDVQVAQNLGRIVFQSGWESFVSAHDLKMCDLLV 101
Query: 89 FEYESNSTFQAHIYDETACE 108
F+Y+ S + ++D + CE
Sbjct: 102 FKYDGMSRMKVLVFDPSGCE 121
>gi|242054247|ref|XP_002456269.1| hypothetical protein SORBIDRAFT_03g033260 [Sorghum bicolor]
gi|241928244|gb|EES01389.1| hypothetical protein SORBIDRAFT_03g033260 [Sorghum bicolor]
Length = 390
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
+IPP F K + R K + E S A + P+G W V +++ +
Sbjct: 32 KIPPDFCKHIPWEASRKAKTTL---------KEASMAATLEGPSGRTWLVVIRRSAEGTF 82
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
F GW FV+ ++F ++ + F A ++D TAC+
Sbjct: 83 FTSGWPKFVQDQELRELEFLVFRHDGGTHFTAMVFDTTACQ 123
>gi|255562725|ref|XP_002522368.1| DNA binding protein, putative [Ricinus communis]
gi|223538446|gb|EEF40052.1| DNA binding protein, putative [Ricinus communis]
Length = 280
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 51 NGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
NG +W V+L K RK+ ++GW+ F + G ++F+++ NS F IY E
Sbjct: 17 NGRIWDVQLVKTERKLIIEEGWKAFASHHFLVDGDFLVFKFDMNSQFFVKIYSRNGLE 74
>gi|297798798|ref|XP_002867283.1| hypothetical protein ARALYDRAFT_913296 [Arabidopsis lyrata subsp.
lyrata]
gi|297313119|gb|EFH43542.1| hypothetical protein ARALYDRAFT_913296 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
+WQVK+ +GR++ +GW++F A++ +G +++F+++ + F + + CEI Y
Sbjct: 56 IWQVKM--DGRRL--TEGWKEFATAHNLQIGDIIIFKHQGDMLFSVTPFGPSCCEIQY 109
>gi|224121894|ref|XP_002318699.1| predicted protein [Populus trichocarpa]
gi|222859372|gb|EEE96919.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 52 GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
G W+VK+ +GW F + +G ++F Y S F+ HIYD++ACE
Sbjct: 70 GQRWKVKVSILNDSFVLQEGWSAFASDHGLELGDFIIFNYIMGSHFEVHIYDKSACE 126
>gi|42566182|ref|NP_567162.2| putative B3 domain-containing protein REM15 [Arabidopsis thaliana]
gi|238065256|sp|O23076.2|REM15_ARATH RecName: Full=Putative B3 domain-containing protein REM15; AltName:
Full=Protein REPRODUCTIVE MERISTEM 15
gi|332656447|gb|AEE81847.1| putative B3 domain-containing protein REM15 [Arabidopsis thaliana]
Length = 528
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W+VK+ +G+++ DGW++F ++ +G +V+F ES+ F + + C I Y S
Sbjct: 48 TWEVKI--DGQRL--TDGWKEFAVSHDLRIGDIVVFRQESDLAFHVTLLGPSCCGIQYGS 103
Query: 114 SNEESHTNGEE 124
+ E + G+E
Sbjct: 104 CSVEKNNLGDE 114
>gi|242038825|ref|XP_002466807.1| hypothetical protein SORBIDRAFT_01g014440 [Sorghum bicolor]
gi|241920661|gb|EER93805.1| hypothetical protein SORBIDRAFT_01g014440 [Sorghum bicolor]
Length = 332
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K F ++ + GY ++V++ K ++ GW+ FV A+ ++
Sbjct: 42 IPGKFAEHFRDKIEGSITLESLGGYTFEVQVAKNFGRIVLQSGWKSFVSAHDLKKMDFLV 101
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNG 122
F+Y S + I+D + CE P ++ NG
Sbjct: 102 FKYNGMSRMKVLIFDPSGCEKVPPCFVTKNAING 135
>gi|218200947|gb|EEC83374.1| hypothetical protein OsI_28786 [Oryza sativa Indica Group]
Length = 423
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V++ ++ + + N + V++ K KV F GW FV+ + +G ++
Sbjct: 49 IPKEFVQRLKGDIPEEIQLETHNRNSYTVRVDKSQEKVIFAAGWAQFVKTFDLRMGDSMM 108
Query: 89 FEYESNSTFQAHIYDETACE 108
F ++ NS F I+D+ E
Sbjct: 109 FRFKGNSQFDVIIFDQVGRE 128
>gi|38346493|emb|CAE02099.2| OSJNBa0020I02.7 [Oryza sativa Japonica Group]
gi|125589960|gb|EAZ30310.1| hypothetical protein OsJ_14357 [Oryza sativa Japonica Group]
Length = 250
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 44 VAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
+A I P G W+++L+K+ ++F GW F+ + G +VL +E N F+ ++
Sbjct: 1 MASILSPLGKFWRIELEKDELGMFFKGGWLQFLSFHGISPGDVVLLRHEGNLVFKIKVFG 60
Query: 104 ETACEINYPSSNEESHTNGEESHH 127
C+ + + ++ + + H
Sbjct: 61 INGCKKDLKTKDDITIQQSARNQH 84
>gi|217075851|gb|ACJ86285.1| unknown [Medicago truncatula]
Length = 509
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
DQ+ +P +L + + P G W + L +F GW+ FV+ +S
Sbjct: 37 DQQLALPKTFSNNVKKKLPENVVLKGPGGVTWNIGLTSRDGTFYFTQGWEQFVKDHSLKE 96
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACE 108
+ F+Y S F+ I+D ++ CE
Sbjct: 97 NDFLFFKYNGESLFEVLIFDGKSFCE 122
>gi|75132779|sp|Q6Z0D2.1|Y8251_ORYSJ RecName: Full=Putative B3 domain-containing protein Os08g0325100
gi|38636994|dbj|BAD03253.1| hypothetical protein [Oryza sativa Japonica Group]
gi|38637418|dbj|BAD03676.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125602988|gb|EAZ42313.1| hypothetical protein OsJ_26886 [Oryza sativa Japonica Group]
Length = 391
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V++ ++ + + N + V++ K KV F GW FV+ + +G ++
Sbjct: 49 IPKEFVQRLKGDIPEEIQLETHNRNSYTVRVDKSQEKVIFAAGWAQFVKTFDLHMGDSMM 108
Query: 89 FEYESNSTFQAHIYDETACE 108
F ++ NS F I+D+ E
Sbjct: 109 FRFKGNSQFDVIIFDQVGRE 128
>gi|242087027|ref|XP_002439346.1| hypothetical protein SORBIDRAFT_09g004870 [Sorghum bicolor]
gi|241944631|gb|EES17776.1| hypothetical protein SORBIDRAFT_09g004870 [Sorghum bicolor]
Length = 534
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
RIP + +SD + PNG + + + +E ++ GW F +A++ +
Sbjct: 40 RIPQEFGSYLRKIISDTIKLNAPNGCTYDIAVCREMGEIVLRSGWDVFADAHNLEQNDYL 99
Query: 88 LFEYESNSTFQAHIYDETA 106
+F++ +S+F+ HIY
Sbjct: 100 VFKFCGSSSFKVHIYSSCG 118
>gi|388508676|gb|AFK42404.1| unknown [Medicago truncatula]
Length = 508
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
DQ+ +P +L + + P G W + L +F GW+ FV+ +S
Sbjct: 37 DQQLALPKTFSNNVKKKLPENVVLKGPGGVTWNIGLTSRDGTFYFTQGWEQFVKDHSLKE 96
Query: 84 GSLVLFEYESNSTFQAHIYD-ETACE 108
+ F+Y S F+ I+D ++ CE
Sbjct: 97 NDFLFFKYNGESLFEVLIFDGKSFCE 122
>gi|115475900|ref|NP_001061546.1| Os08g0324300 [Oryza sativa Japonica Group]
gi|75132786|sp|Q6Z0D9.1|Y8347_ORYSJ RecName: Full=B3 domain-containing protein Os08g0324300
gi|38636987|dbj|BAD03246.1| auxin response factor-like [Oryza sativa Japonica Group]
gi|38637411|dbj|BAD03669.1| auxin response factor-like [Oryza sativa Japonica Group]
gi|113623515|dbj|BAF23460.1| Os08g0324300 [Oryza sativa Japonica Group]
gi|215687031|dbj|BAG90877.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 270
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V++ ++ + N V++ K KV F +GW FV+ + +G ++
Sbjct: 40 IPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMM 99
Query: 89 FEYESNSTFQAHIYD----ETAC 107
F + NS F I D E AC
Sbjct: 100 FRFNGNSQFDVIIVDQIGREKAC 122
>gi|297798800|ref|XP_002867284.1| hypothetical protein ARALYDRAFT_913297 [Arabidopsis lyrata subsp.
lyrata]
gi|297313120|gb|EFH43543.1| hypothetical protein ARALYDRAFT_913297 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
VW+VK++ +GR++ GW++FV A F+G +++F +E + F + CEI Y
Sbjct: 47 VWEVKIE-DGRRL--TRGWKEFVTAQDFFIGDVIVFRHEGDLVFHVTALGPSFCEIEY 101
>gi|357437999|ref|XP_003589275.1| B3 domain-containing protein [Medicago truncatula]
gi|355478323|gb|AES59526.1| B3 domain-containing protein [Medicago truncatula]
Length = 350
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 18 LPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVE 77
L ST +Q+ +P +L + + P+G W V L+ V+F DGW F
Sbjct: 26 LHSTDFEQQLALPRTFSDNLKKKLPENVTLKGPSGVEWNVGLQTRDNTVYFVDGWHQFAR 85
Query: 78 AYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
+S +F+Y S F I+ E+ CE
Sbjct: 86 DHSLKENDFAVFKYNGESLFNVLIFQGESFCE 117
>gi|26450115|dbj|BAC42177.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
I + +K + SD + IT W+VK+ +G+++ DGW++F ++ +G +V+
Sbjct: 29 IEGRYEQKTAELRSDASKIT------WEVKI--DGQRL--TDGWKEFALSHDLRIGDIVV 78
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEE 117
F E + +F + + CEI Y S ++E
Sbjct: 79 FRQERDMSFHVTMLGPSCCEIQYGSCSDE 107
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI-PNGYVW--QVKLKKEGRKV 66
P FV V PSTLR +P + +R+ + I + G W +KLKK
Sbjct: 234 PSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTS 293
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEY--ESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
GW+ F A GS++ F+ +S + + +E E+ ++ ES + +E
Sbjct: 294 LIRRGWRSFCSANGLRAGSIITFKLIKKSGTLVLCLLSNEPEKEVCSEANEVESLSTDQE 353
Query: 125 SH 126
SH
Sbjct: 354 SH 355
>gi|297722365|ref|NP_001173546.1| Os03g0620500 [Oryza sativa Japonica Group]
gi|218193323|gb|EEC75750.1| hypothetical protein OsI_12639 [Oryza sativa Indica Group]
gi|255674713|dbj|BAH92274.1| Os03g0620500 [Oryza sativa Japonica Group]
Length = 111
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + +F ++S + P G V+ VK+ K K GW+ FV+A+ +L
Sbjct: 43 IPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLL 102
Query: 89 FEYESNSTF 97
F + NS F
Sbjct: 103 FRHIKNSRF 111
>gi|3281860|emb|CAA19755.1| putative protein [Arabidopsis thaliana]
gi|7270071|emb|CAB79886.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 39 HELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQ 98
HE V + W+VK+ +G ++ +GW++FVEA+ + V+F +E + F
Sbjct: 50 HEGETVKLRADASKRTWEVKM--DGNRL--TEGWKEFVEAHDLRIRDFVVFRHEGDMVFH 105
Query: 99 AHIYDETACEINYPSS 114
+ CEI YP S
Sbjct: 106 VTALGPSCCEIQYPQS 121
>gi|3281862|emb|CAA19757.1| putative protein [Arabidopsis thaliana]
gi|7270069|emb|CAB79884.1| putative protein [Arabidopsis thaliana]
Length = 344
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY-PS 113
WQVK+ +GR++ GW++F A+ VG +++F +E + F + CEI Y PS
Sbjct: 57 WQVKI--QGRRLTV--GWKEFASAHDFRVGDIIVFRHEGSLVFHVTALGPSCCEIQYVPS 112
Query: 114 SNEESH 119
N + +
Sbjct: 113 CNNQEN 118
>gi|334184423|ref|NP_001189594.1| Transcriptional factor B3 family protein [Arabidopsis thaliana]
gi|322510067|sp|Q8GYM4.2|REM14_ARATH RecName: Full=B3 domain-containing protein REM14; AltName:
Full=Protein REPRODUCTIVE MERISTEM 14
gi|330252515|gb|AEC07609.1| Transcriptional factor B3 family protein [Arabidopsis thaliana]
Length = 490
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
I + +K + SD + IT W+VK+ +G+++ DGW++F ++ +G +V+
Sbjct: 29 IEGRYEQKTAELRSDASKIT------WEVKI--DGQRL--TDGWKEFALSHDLRIGDIVV 78
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEE 117
F E + +F + + CEI Y S ++E
Sbjct: 79 FRQERDMSFHVTMLGPSCCEIQYGSCSDE 107
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI-PNGYVW--QVKLKKEGRKV 66
P FV V PSTLR +P + +R+ + I + G W +KLKK
Sbjct: 234 PSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTS 293
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNS-----TFQAHIYDETAC----EINYPSSNEE 117
GW+ F A GS++ F+ S ++ +E C E+ S+++E
Sbjct: 294 LIRRGWRSFCSANGLRAGSIITFKLIKKSGTLVLCLLSNEPEEEVCSEANEVESLSTDQE 353
Query: 118 SHTNGEESHH 127
SH EES H
Sbjct: 354 SH---EESSH 360
>gi|4572680|gb|AAD23895.1| hypothetical protein [Arabidopsis thaliana]
Length = 1440
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 27 PRIP---------NKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVE 77
PRIP + +K + SD + IT W+VK+ +G+++ DGW++F
Sbjct: 968 PRIPVAFFLKNIEGRYEQKTAELRSDASKIT------WEVKI--DGQRL--TDGWKEFAL 1017
Query: 78 AYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEE 117
++ +G +V+F E + +F + + CEI Y S ++E
Sbjct: 1018 SHDLRIGDIVVFRQERDMSFHVTMLGPSCCEIQYGSCSDE 1057
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI-PNGYVW--QVKLKKEGRKV 66
P FV V PSTLR +P + +R+ + I + G W +KLKK
Sbjct: 1184 PSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTS 1243
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNS-----TFQAHIYDETAC----EINYPSSNEE 117
GW+ F A GS++ F+ S ++ +E C E+ S+++E
Sbjct: 1244 LIRRGWRSFCSANGLRAGSIITFKLIKKSGTLVLCLLSNEPEEEVCSEANEVESLSTDQE 1303
Query: 118 SHTNGEESHH 127
SH EES H
Sbjct: 1304 SH---EESSH 1310
>gi|168043086|ref|XP_001774017.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674702|gb|EDQ61207.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 701
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK--EGRKVWF 68
P F+K + ST+ + +P VR + L + + P+ W+V+L EG + F
Sbjct: 142 PSFLKKITESTMSTLE--LPTSFVRDYIGSLHESVILEGPSSKQWRVELHGYGEGFNISF 199
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
GW +F + +G + F S FQ +YD
Sbjct: 200 GQGWNNFAVDHGLQIGDQLSFSLSKKSYFQVEVYD 234
>gi|357473111|ref|XP_003606840.1| B3 domain-containing protein [Medicago truncatula]
gi|355507895|gb|AES89037.1| B3 domain-containing protein [Medicago truncatula]
Length = 273
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 28 RIPNKIVRKFSHELSDVAHITI--PNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGS 85
++P +IV EL + + +G W+V + K+G ++ GWQ F+ +
Sbjct: 25 KVPPEIVTDLGEELWKNTFMILVGSSGEKWEVSILKKGNDIYLQIGWQKFLIDNKVMLEE 84
Query: 86 LVLFEYESNSTFQAHIYDETACE 108
L++F Y+ + FQ I+ + E
Sbjct: 85 LLVFTYDGENKFQGQIFGKNGLE 107
>gi|30689110|ref|NP_194894.2| B3 domain-containing protein REM7 [Arabidopsis thaliana]
gi|75329150|sp|Q8H2D0.1|REM7_ARATH RecName: Full=B3 domain-containing protein REM7; AltName:
Full=Auxin response factor 25; AltName: Full=Protein
REPRODUCTIVE MERISTEM 7
gi|24817269|emb|CAD56215.1| putative auxin response factor 25 [Arabidopsis thaliana]
gi|332660542|gb|AEE85942.1| B3 domain-containing protein REM7 [Arabidopsis thaliana]
Length = 251
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY-P 112
WQVK+ +GR++ GW++F A+ VG +++F +E + F + CEI Y P
Sbjct: 56 TWQVKI--QGRRLTV--GWKEFASAHDFRVGDIIVFRHEGSLVFHVTALGPSCCEIQYVP 111
Query: 113 SSNEE 117
S N +
Sbjct: 112 SCNNQ 116
>gi|218200942|gb|EEC83369.1| hypothetical protein OsI_28781 [Oryza sativa Indica Group]
Length = 381
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V++ ++ + N V++ K KV F +GW FV+ + +G ++
Sbjct: 40 IPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMM 99
Query: 89 FEYESNSTFQAHIYD----ETAC 107
F + NS F I D E AC
Sbjct: 100 FRFNGNSQFDVIIVDQIGREKAC 122
>gi|326526225|dbj|BAJ97129.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 701
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
+F + LP D + +IP + ++ + + + +G W+ +L + +F G
Sbjct: 66 QFARVFLPQLYGD-RLKIPPSFNQYLQNQPTGLVSLKGQSGNTWRAELASDNEGFFFVKG 124
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
W++FV +S G + F Y+ S F I+D E
Sbjct: 125 WKEFVRDHSIETGHFLTFRYDGRSQFSVVIFDGMCIE 161
>gi|357120360|ref|XP_003561895.1| PREDICTED: B3 domain-containing protein Os03g0212300-like
[Brachypodium distachyon]
Length = 293
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKF-SHELSDVAHITIPNGYVWQVKLKKEGRK-VWFDD 70
F + +L +T +K R+P++ E ++ G +W V + +G ++
Sbjct: 13 FFRVILENTW--EKQRMPDEFAAALDGREPQELKLREAGGGRLWAVDVVFDGDGHMYLTR 70
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEES 118
GW F A+ +GS ++F Y+ ST ++ T C + E++
Sbjct: 71 GWAQFARAHGLGLGSFLVFTYDGGSTLSVSVFGVTTCRKRFQRKKEDT 118
>gi|75141955|sp|Q7XFU9.1|Y1030_ORYSJ RecName: Full=B3 domain-containing protein Os10g0323000
gi|15217238|gb|AAK92582.1|AC074354_16 Hypothetical protein [Oryza sativa Japonica Group]
gi|31431130|gb|AAP52952.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|125574362|gb|EAZ15646.1| hypothetical protein OsJ_31059 [Oryza sativa Japonica Group]
Length = 272
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 26 KPRIPNKIVRKFSHELSDVAHITI--PNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
+P P + R H D H+T+ N V+L+K G+ + GW+ FVE V
Sbjct: 54 EPLPPEIVARCNGH---DGKHLTLVTRNSKPVNVRLEKRGQSFYISKGWKKFVELTDLRV 110
Query: 84 GSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESHH 127
G V F S ST I D+ + P S + + S H
Sbjct: 111 GQCVRFSVSSPSTLDLLILDKHGTSLAIPPSKRDLKLKSKRSTH 154
>gi|15219306|ref|NP_173109.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|75173036|sp|Q9FX77.1|Y1664_ARATH RecName: Full=B3 domain-containing protein At1g16640
gi|9989056|gb|AAG10819.1|AC011808_7 Unknown protein [Arabidopsis thaliana]
gi|46518347|gb|AAS99655.1| At1g16640 [Arabidopsis thaliana]
gi|48310303|gb|AAT41794.1| At1g16640 [Arabidopsis thaliana]
gi|225897932|dbj|BAH30298.1| hypothetical protein [Arabidopsis thaliana]
gi|332191358|gb|AEE29479.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 134
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 51 NGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
+G W V++KK G KV+ GW++FV+ + G + F Y+ + TF IY C
Sbjct: 46 SGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQFIYDRDRTFYVIIYGHNMC 102
>gi|115454163|ref|NP_001050682.1| Os03g0622200 [Oryza sativa Japonica Group]
gi|122246887|sp|Q10GM3.1|Y3222_ORYSJ RecName: Full=B3 domain-containing protein Os03g0622200
gi|108709883|gb|ABF97678.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113549153|dbj|BAF12596.1| Os03g0622200 [Oryza sativa Japonica Group]
gi|215766253|dbj|BAG98481.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625384|gb|EEE59516.1| hypothetical protein OsJ_11768 [Oryza sativa Japonica Group]
Length = 378
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-EGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P + F+ +S+ ++ P+G W + + + ++ GW++FV+ G +
Sbjct: 46 VPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCL 105
Query: 88 LFEYES-NSTFQAHIYDETACEINYP 112
LF Y +S+F I+D + CE P
Sbjct: 106 LFRYSGVSSSFDVLIFDPSGCEKASP 131
>gi|297802868|ref|XP_002869318.1| hypothetical protein ARALYDRAFT_328561 [Arabidopsis lyrata subsp.
lyrata]
gi|297315154|gb|EFH45577.1| hypothetical protein ARALYDRAFT_328561 [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
W+VK+ +GR GW++F A+ VG +++F +E + F + CEI Y S
Sbjct: 57 WEVKI--DGRSRRLTGGWKEFATAHDFRVGDIIVFRHEGDLVFHVTALGPSCCEIQYVQS 114
>gi|60594298|pdb|1YEL|A Chain A, Structure Of The Hypothetical Arabidopsis Thaliana Protein
At1g16640.1
Length = 104
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 51 NGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
+G W V++KK G KV+ GW++FV+ + G + F Y+ + TF IY C
Sbjct: 48 SGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQFIYDRDRTFYVIIYGHNMC 104
>gi|357130860|ref|XP_003567062.1| PREDICTED: B3 domain-containing protein Os01g0723500-like
[Brachypodium distachyon]
Length = 381
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRK-VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAH 100
S A + P+G W V +++ + +F GW FV+ + ++F ++ + F A
Sbjct: 59 SMAATLEGPSGRTWPVVIRRTAAEGTFFASGWTKFVQDQALRELDFLVFRHDGGTRFAAM 118
Query: 101 IYDETACE 108
++D+TACE
Sbjct: 119 VFDKTACE 126
>gi|297825865|ref|XP_002880815.1| hypothetical protein ARALYDRAFT_901447 [Arabidopsis lyrata subsp.
lyrata]
gi|297326654|gb|EFH57074.1| hypothetical protein ARALYDRAFT_901447 [Arabidopsis lyrata subsp.
lyrata]
Length = 535
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
W+VK+ +G+++ +GW+DF A+ +G +++F E + TF + + CEI Y S
Sbjct: 49 WKVKI--DGQRL--TNGWRDFALAHDLRIGDIIVFRQERDMTFHVTMLGPSCCEIQYVSC 104
Query: 115 NEESHTNG 122
+ + G
Sbjct: 105 LDNQNNRG 112
>gi|414871859|tpg|DAA50416.1| TPA: hypothetical protein ZEAMMB73_675727 [Zea mays]
Length = 324
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPN--GYVWQVKLKKEGRKVWFD 69
R+ VL R++ +P+K ++ F+ L + +T+ + G + V++ + KV
Sbjct: 26 RYFFKVLVGDFRERLA-VPDKFMQHFTRGLV-TSSVTLESRCGRSFHVQVAENLGKVVLQ 83
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS----NEESHTNGEE 124
GW++FV A+ +G +++F+++ + ++D + CE P E H G E
Sbjct: 84 AGWKEFVAAHGLSMGDVLVFKHDGTPRLKVFMFDHSCCEKVPPPCPVKIKREHHVCGGE 142
>gi|297829138|ref|XP_002882451.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297328291|gb|EFH58710.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 341
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE 62
S +S ++ PRF V S + IP L A + G W+V +
Sbjct: 15 SMASSDVLPRFF-TVFLSQYSSESMVIPRSYYEHLPRRLPKTAILVGTGGRFWKVAMTSR 73
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+F+ GW +FV G + F ++ + +++ IY C+
Sbjct: 74 REQVYFEQGWGNFVADNELKDGEFLTFVFDGHKSYEVSIYGRGDCK 119
>gi|15230649|ref|NP_187267.1| B3 domain-containing protein REM21 [Arabidopsis thaliana]
gi|75186414|sp|Q9M8K2.1|REM21_ARATH RecName: Full=B3 domain-containing protein REM21; AltName:
Full=Protein REPRODUCTIVE MERISTEM 21
gi|6862920|gb|AAF30309.1|AC018907_9 hypothetical protein [Arabidopsis thaliana]
gi|332640833|gb|AEE74354.1| B3 domain-containing protein REM21 [Arabidopsis thaliana]
Length = 330
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE 62
S +S ++ PRF L S + IP L A + G W+V + +
Sbjct: 15 SMASGDVLPRFFTVFL-SHCSSESMVIPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSK 73
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+F+ GW +FV G + F ++ + +++ IY C+
Sbjct: 74 QEQVYFEQGWGNFVADNQLKEGEFLTFVFDGHKSYEVSIYGRGDCK 119
>gi|357152696|ref|XP_003576206.1| PREDICTED: B3 domain-containing protein Os11g0197600-like
[Brachypodium distachyon]
Length = 582
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
+F + LP ++ RIP + ++ + + + +G +W +L + ++F +G
Sbjct: 78 QFFRVFLPQQY-GERLRIPLSFNQYLRNQPAGMVSLKGQSGNIWLAELAVDTEGLFFANG 136
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
W++FV +S G + F Y+ S F ++D E
Sbjct: 137 WKEFVRDHSIETGHFLTFRYDGRSKFSVVVFDGKCIE 173
>gi|357115791|ref|XP_003559669.1| PREDICTED: B3 domain-containing protein Os03g0620400-like
[Brachypodium distachyon]
Length = 568
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + F ++S + P+G + V++ K K GW+ F++A+ +L
Sbjct: 43 IPNKFMDHFGGKISRTIELESPDGNTYVVEVSKNLSKKSPCHGWEAFLDAHHIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ + D CE
Sbjct: 103 FRHIKNSRFEVLVLDSDDCE 122
>gi|297825455|ref|XP_002880610.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326449|gb|EFH56869.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 543
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD + +T W+VK+ +GR++ +GW+DF A+ VG +V+F E F
Sbjct: 50 SDASEMT------WRVKI--DGRRL--SNGWEDFTVAHDLRVGDIVVFRQEGELVFHVSA 99
Query: 102 YDETACEINY 111
+ CEI Y
Sbjct: 100 LGPSCCEIQY 109
>gi|334185125|ref|NP_001189823.1| B3 domain-containing protein REM21 [Arabidopsis thaliana]
gi|332640834|gb|AEE74355.1| B3 domain-containing protein REM21 [Arabidopsis thaliana]
Length = 374
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE 62
S +S ++ PRF V S + IP L A + G W+V + +
Sbjct: 59 SMASGDVLPRFF-TVFLSHCSSESMVIPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSK 117
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+F+ GW +FV G + F ++ + +++ IY C+
Sbjct: 118 QEQVYFEQGWGNFVADNQLKEGEFLTFVFDGHKSYEVSIYGRGDCK 163
>gi|297820056|ref|XP_002877911.1| hypothetical protein ARALYDRAFT_906718 [Arabidopsis lyrata subsp.
lyrata]
gi|297323749|gb|EFH54170.1| hypothetical protein ARALYDRAFT_906718 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 4 PSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEG 63
+ ++ PRF K L T D IP + L + G +W V L+K
Sbjct: 2 ADNSDLYPRFFKVFLSETASDSLV-IPLSFNEFLADPLPKTVKLQGIGGKIWTVSLEKIS 60
Query: 64 RKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-----ETACEI 109
V+F GW F + + G + F Y+ + TF+ +++ ET EI
Sbjct: 61 GAVYFATGWSKFAKDHELKNGEFMTFVYDGHRTFEVSVFERFGFKETRAEI 111
>gi|297829660|ref|XP_002882712.1| hypothetical protein ARALYDRAFT_317904 [Arabidopsis lyrata subsp.
lyrata]
gi|297328552|gb|EFH58971.1| hypothetical protein ARALYDRAFT_317904 [Arabidopsis lyrata subsp.
lyrata]
Length = 355
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
WQVK+ +GR++ GWQ F ++ VG +V+F ++ + F + CEI Y +
Sbjct: 59 WQVKM--DGRRL--TQGWQKFATSHDLQVGDIVVFRHDGDLLFHVTCLGPSCCEIQYDND 114
Query: 115 NE 116
++
Sbjct: 115 DD 116
>gi|297805024|ref|XP_002870396.1| hypothetical protein ARALYDRAFT_355494 [Arabidopsis lyrata subsp.
lyrata]
gi|297316232|gb|EFH46655.1| hypothetical protein ARALYDRAFT_355494 [Arabidopsis lyrata subsp.
lyrata]
Length = 499
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD + IT W +K+ +GR++ GW++F ++ VG +++F +E N F
Sbjct: 50 SDASEIT------WNIKI--DGRRM--TKGWEEFAVGHNLQVGDILVFRHEGNLLFHVTP 99
Query: 102 YDETACEINYPSSNEE 117
+ + CEI Y ++E+
Sbjct: 100 FGLSCCEILYSQNDEK 115
>gi|297805026|ref|XP_002870397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316233|gb|EFH46656.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 282
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD + IT W +K+ +GR++ GW++F ++ VG +++F +E N F
Sbjct: 50 SDASEIT------WNIKI--DGRRM--TKGWEEFAVGHNLQVGDILVFRHEGNLLFHVTP 99
Query: 102 YDETACEINYPSSNEE 117
+ + CEI Y ++E+
Sbjct: 100 FGLSCCEILYSQNDEK 115
>gi|399920212|gb|AFP55559.1| transcription factor b3 [Rosa rugosa]
Length = 395
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 29 IPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGR--KVWFDDGWQDFVEAYSTFVGS 85
+P R++ H+++D + +PN G W+++L+ R ++W + G ++F Y G
Sbjct: 89 LPPAAAREYGHQMADHISLKVPNCGKHWKIELRTSPRRYRMWLEKGREEFASFYLLDQGD 148
Query: 86 LVLFEYE-SNSTFQ---AHIYDETACE 108
+ F E NS FQ AH +E E
Sbjct: 149 MATFSSEGENSHFQLMSAHQREEIGAE 175
>gi|168035283|ref|XP_001770140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678666|gb|EDQ65122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 736
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR--KVWF 68
P F+K + ST+ K +P + S LSD + P W+V+L G+ V F
Sbjct: 108 PSFLKTMTESTIDTLK--LPRSFLLDNSGRLSDSVILEGPCREQWRVELHGYGQSFNVSF 165
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
GW FV + VG ++F S FQ +YD
Sbjct: 166 GQGWSKFVVDHVLQVGDHLVFFLLQKSYFQVEVYD 200
>gi|147816542|emb|CAN72782.1| hypothetical protein VITISV_008015 [Vitis vinifera]
Length = 318
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE 62
P F K + PS LRD K P + VR++ LS + P+G W V+L K
Sbjct: 23 PHFFKIIHPSLLRDGKLGFPKRFVRRYGKNLSKFIFLKTPSGAEWAVQLVKR 74
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 11 PRFVKAVLPS-TLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
P F+ + P+ R K IP + V++ + ++ A + +P G W VK V F
Sbjct: 209 PFFIVTMQPTYVTRRYKLNIPLRFVKRHFEKNNNTATLLVPAGRTWPVKCSVAKTDVKFS 268
Query: 70 DGWQDFVEAYSTFVGSLVLFEY 91
GW++FV VG + E
Sbjct: 269 RGWRNFVVDNRLEVGDVCAXEM 290
>gi|242086490|ref|XP_002443670.1| hypothetical protein SORBIDRAFT_08g023200 [Sorghum bicolor]
gi|241944363|gb|EES17508.1| hypothetical protein SORBIDRAFT_08g023200 [Sorghum bicolor]
Length = 297
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELS------DVAHITIPNGYVWQVKLKKEG 63
P +F K +LP + I + KF+ L A + G W V+L+++
Sbjct: 11 PHKFFKVLLPGSFE-----ISLSLPPKFAASLGVLRSWRAAAKLRDHTGRSWDVELRRDA 65
Query: 64 --RKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
R + GW+ FV A + G L++FE+ F +D + C
Sbjct: 66 AHRVCFTGGGWRGFVSANAVSAGQLLVFEHRGGFDFTVDRFDASGC 111
>gi|224094515|ref|XP_002310173.1| predicted protein [Populus trichocarpa]
gi|222853076|gb|EEE90623.1| predicted protein [Populus trichocarpa]
Length = 299
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 45 AHITIPNGYVWQVKL-KKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
A + N +WQV L K+EG V DGW++F +S G ++F+Y+ +S F+ +Y
Sbjct: 48 ATLKDGNAKIWQVGLVKREGDWV-IKDGWKEFACYHSLVDGDFLIFKYDGSSEFEVELYG 106
Query: 104 ETACEIN 110
+ N
Sbjct: 107 NDGLKNN 113
>gi|168022973|ref|XP_001764013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684752|gb|EDQ71152.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 11 PRFVKAVLPS-TLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLK------KEG 63
P FVK + + T R+ + IP + + K + L V +T PNG +V LK ++G
Sbjct: 25 PCFVKTITRAMTERNDRLVIPIEFINKHGNMLHSVISLTGPNGCPLRVMLKVRTCAGRDG 84
Query: 64 R---KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDE 104
R V+ GW+ FV +G ++F+ + S F+ + +
Sbjct: 85 RLNVSVFMAHGWKYFVTENCLQMGDRIIFQLVARSRFRVLLCAQ 128
>gi|297851012|ref|XP_002893387.1| T24P13.6 [Arabidopsis lyrata subsp. lyrata]
gi|297339229|gb|EFH69646.1| T24P13.6 [Arabidopsis lyrata subsp. lyrata]
Length = 1003
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W VK+ +G + DGW+DF A+ +G +V+F +E F + CEI Y +
Sbjct: 58 TWLVKM--DG--LNLTDGWEDFAFAHDLRIGDIVIFRHEGEMVFHVTALGPSCCEIQYYT 113
Query: 114 SNEESH 119
S+ S+
Sbjct: 114 SSHNSN 119
>gi|397787623|gb|AFO66528.1| putative eukaryotic translation initiation factor SUI1 family
protein [Brassica napus]
Length = 704
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 51 NGYVWQVK---------LKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
NG W+++ + +EGR++ GW+DF A+ +G +++F++E + F
Sbjct: 300 NGKKWKLRSDASDQTWEVIQEGRRL--TGGWKDFTTAHDLQIGDVLVFKHEGDMVFHVTP 357
Query: 102 YDETACEINY 111
+ + CEI Y
Sbjct: 358 FGPSCCEIQY 367
>gi|18409814|ref|NP_566984.1| B3 domain-containing protein REM20 [Arabidopsis thaliana]
gi|75154861|sp|Q8LAV5.1|REM20_ARATH RecName: Full=B3 domain-containing protein REM20; AltName:
Full=Protein REPRODUCTIVE MERISTEM 20
gi|21593179|gb|AAM65128.1| unknown [Arabidopsis thaliana]
gi|106879195|gb|ABF82627.1| At3g53310 [Arabidopsis thaliana]
gi|225898709|dbj|BAH30485.1| hypothetical protein [Arabidopsis thaliana]
gi|332645546|gb|AEE79067.1| B3 domain-containing protein REM20 [Arabidopsis thaliana]
Length = 286
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
E+ PRF K L + + IP + + L + G +W V LKK +
Sbjct: 6 ELYPRFFKVFLVES-ASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAY 64
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
GW F E + G + F Y+ + TF+ ++D
Sbjct: 65 LTRGWPKFAEEHELKNGEFMTFVYDGHRTFEVSVFD 100
>gi|357118820|ref|XP_003561147.1| PREDICTED: uncharacterized protein LOC100832403 [Brachypodium
distachyon]
Length = 352
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + +E V + P+G W+V+L ++ F GW++F+ G ++
Sbjct: 228 IPPPFYKHLENESPGVVFLRGPSGNKWRVELVANNMELCFVHGWKEFLSDNRIQPGYFLV 287
Query: 89 FEYESNSTFQAHIYDETACEINY 111
F Y S F ++D A E Y
Sbjct: 288 FCYNGQSQFSVTVFDSAAHEAPY 310
>gi|6729482|emb|CAB67638.1| putative protein [Arabidopsis thaliana]
Length = 283
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
E+ PRF K L + + IP + + L + G +W V LKK +
Sbjct: 6 ELYPRFFKVFLVES-ASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAY 64
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
GW F E + G + F Y+ + TF+ ++D
Sbjct: 65 LTRGWPKFAEEHELKNGEFMTFVYDGHRTFEVSVFD 100
>gi|297797677|ref|XP_002866723.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312558|gb|EFH42982.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK----VWF 68
F K LP + IP + EL A + G +W V+ K E + V F
Sbjct: 12 FFKVFLPE-FSSHELVIPPAFIDILDKELPKEAFLVDEIGRLWCVETKTEDTEERFCVLF 70
Query: 69 DDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC--EINYPSSNEESHTNGEE 124
GW+ F S G ++F Y+ +S F I+ + C +I ++ + S + +E
Sbjct: 71 KKGWESFANDQSLEFGDFLVFRYDGDSRFSVTIFAKDGCKKDIGVVTTTDRSRVSVDE 128
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD- 69
P F++ + ++L QK IP +R EL + + NG W +K+ GR V F
Sbjct: 219 PHFLRNITIASL--QKLEIPLTFLRSNGIELEEEVGLCDENGKKWPLKIVNHGRGVKFSH 276
Query: 70 DGWQDFVEAYSTFVGSLVLFEY 91
+ W F ++++ + LFE+
Sbjct: 277 ESWLCFCKSHNMMLTHKCLFEF 298
>gi|15240157|ref|NP_201499.1| putative B3 domain-containing protein [Arabidopsis thaliana]
gi|75333798|sp|Q9FGD2.1|Y5698_ARATH RecName: Full=Putative B3 domain-containing protein At5g66980
gi|9758543|dbj|BAB08937.1| unnamed protein product [Arabidopsis thaliana]
gi|332010903|gb|AED98286.1| putative B3 domain-containing protein [Arabidopsis thaliana]
Length = 334
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK----VW 67
+F K LP + IP + L A + G +W V+ K E + V+
Sbjct: 9 QFFKVFLPE-FGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVF 67
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC--EINYPSSNEESHTNGEE 124
F GWQ F S G ++F Y+ +S F I+ C ++ S+ + S + +E
Sbjct: 68 FTKGWQSFANDQSLEFGDFLVFSYDGDSRFSVTIFANDGCKKDVGVVSTTDRSRVSLDE 126
>gi|297798804|ref|XP_002867286.1| hypothetical protein ARALYDRAFT_913300 [Arabidopsis lyrata subsp.
lyrata]
gi|297313122|gb|EFH43545.1| hypothetical protein ARALYDRAFT_913300 [Arabidopsis lyrata subsp.
lyrata]
Length = 632
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVR---KFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P F + +LP D IP K K HE V + + W+VK+ EG ++
Sbjct: 12 PHFFQPLLPGF--DSHLNIPVKFFSDHIKGKHEGKTVNLRSDASERTWKVKM--EGNRL- 66
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
GW++FV+A+ V V+F +E F + CEI Y
Sbjct: 67 -TKGWKEFVKAHDLRVSDFVVFRHEGEMLFNVTALGPSCCEIQY 109
>gi|168022603|ref|XP_001763829.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685073|gb|EDQ71471.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P + + +L NG VW V++ + + F GW+ FV S G VL
Sbjct: 1 VPREFSESYGDDLRGPVSFHGANGKVWSVEVGGPAKFLGFKGGWRSFVADNSLKRGDQVL 60
Query: 89 FEYESNSTFQAHIYDETACE 108
F S TF +++++ E
Sbjct: 61 FLLVSTKTFSVYVFNKLGVE 80
>gi|6049877|gb|AAF02792.1|AF195115_12 F5I10.15 gene product [Arabidopsis thaliana]
gi|2252835|gb|AAB62834.1| A_IG005I10.15 gene product [Arabidopsis thaliana]
gi|7267113|emb|CAB80784.1| AT4g00260 [Arabidopsis thaliana]
Length = 490
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
W+VK+ +G+++ DGW++F ++ +G +V+F ES+ F + + C I Y S
Sbjct: 35 WEVKI--DGQRL--TDGWKEFAVSHDLRIGDIVVFRQESDLAFHVTLLGPSCCGIQYGSC 90
Query: 115 NEESHTNGE 123
+ E + G+
Sbjct: 91 SVEKNNLGD 99
>gi|125602986|gb|EAZ42311.1| hypothetical protein OsJ_26884 [Oryza sativa Japonica Group]
Length = 388
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V++ ++ + N V++ K KV F +GW FV+ + +G ++
Sbjct: 40 IPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMM 99
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F I D+ E
Sbjct: 100 FRFNGNSQFDVIIVDQIGRE 119
>gi|242038823|ref|XP_002466806.1| hypothetical protein SORBIDRAFT_01g014430 [Sorghum bicolor]
gi|241920660|gb|EER93804.1| hypothetical protein SORBIDRAFT_01g014430 [Sorghum bicolor]
Length = 316
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K + F ++ + G + V++ K ++ GW+ FV A+ ++
Sbjct: 43 IPGKFAKHFRDKIERNITLESFGGLTFDVQVAKNLGRIVLQSGWKSFVSAHDLKKMDFLV 102
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGE 123
F+Y S + I+D + CE P ++ +GE
Sbjct: 103 FKYNGMSRMKVLIFDPSGCEKVPPCFVAKNAISGE 137
>gi|75142173|sp|Q7XGM6.1|Y1086_ORYSJ RecName: Full=Putative B3 domain-containing protein Os10g0158600
gi|15341589|gb|AAK95681.1|AC087723_14 Hypothetical protein [Oryza sativa]
gi|22655718|gb|AAN04135.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|31430285|gb|AAP52219.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|222612465|gb|EEE50597.1| hypothetical protein OsJ_30781 [Oryza sativa Japonica Group]
Length = 168
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F A L +T + P +P + + + D + +G ++++K+ ++ GW
Sbjct: 6 FASARLNATNQSYLP-VPITLATAYEMQHGDSLRLKTSHGLKIKIRIKEAASTLYMTTGW 64
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA---CEINYPSSN 115
++F EA G +LF S S + + + C + PS+
Sbjct: 65 KEFAEATGLETGETILFRMSSRSKARVMLLNRQCLIRCPVKTPSTT 110
>gi|4646230|gb|AAD26893.1| hypothetical protein [Arabidopsis thaliana]
Length = 899
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD + +T W+VK+ +GR++ +GW+DF A+ VG +V+F E F
Sbjct: 50 SDASEMT------WKVKI--DGRRL--SNGWEDFTIAHDLRVGDIVVFRQEGELVFHVTA 99
Query: 102 YDETACEINYPSSNEESHTNGEES 125
+ CEI Y E G S
Sbjct: 100 LGPSCCEIQYGEDTLEEDKIGNLS 123
>gi|297811619|ref|XP_002873693.1| hypothetical protein ARALYDRAFT_909450 [Arabidopsis lyrata subsp.
lyrata]
gi|297319530|gb|EFH49952.1| hypothetical protein ARALYDRAFT_909450 [Arabidopsis lyrata subsp.
lyrata]
Length = 134
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
++ PRF +V S IP L + G W+V +K + +V+
Sbjct: 5 DVLPRFF-SVFLSQYNSNSFLIPRSYYDHLPRRLPKTVILMGNGGKSWKVAMKSKRDQVY 63
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
F+ GW +FV G ++ F ++ + ++ IY C+
Sbjct: 64 FEQGWANFVAENELRDGEVLTFVFDGHRCYEVSIYTRGGCK 104
>gi|357473113|ref|XP_003606841.1| B3 domain-containing protein [Medicago truncatula]
gi|355507896|gb|AES89038.1| B3 domain-containing protein [Medicago truncatula]
Length = 198
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 16 AVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI--PNGYVWQVKLKKEGRKVWFDD-GW 72
A++ + ++P KIV E A I + +G W+VK+ K+ ++ + GW
Sbjct: 13 AIIKEGFNTKCMKVPPKIVMDLGEEFWKKASIILVCSSGEKWEVKILKKANDIYVRNFGW 72
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
Q F++ S + ++F Y + F IY + E
Sbjct: 73 QKFLKDNSVGLEEFLVFTYIGENLFNVEIYGKNGLE 108
>gi|413937622|gb|AFW72173.1| hypothetical protein ZEAMMB73_205065 [Zea mays]
Length = 937
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + + + + + ++ G +V + K + FD GW FV + G +L
Sbjct: 222 IPRIVAPRLEYLTNQLVYLKDSKGKCLKVLVSKVVDSLAFDQGWDVFVSNHLIKWGEFLL 281
Query: 89 FEYESNSTFQAHIYDETACE-INYPSSNEESHTNGE 123
FEY + TF ++ +CE +++ N ES GE
Sbjct: 282 FEYIAERTFSVRVFGTDSCERLDF---NPESTNKGE 314
>gi|413937621|gb|AFW72172.1| hypothetical protein ZEAMMB73_205065 [Zea mays]
Length = 817
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + + + + + ++ G +V + K + FD GW FV + G +L
Sbjct: 222 IPRIVAPRLEYLTNQLVYLKDSKGKCLKVLVSKVVDSLAFDQGWDVFVSNHLIKWGEFLL 281
Query: 89 FEYESNSTFQAHIYDETACE-INYPSSNEESHTNGE 123
FEY + TF ++ +CE +++ N ES GE
Sbjct: 282 FEYIAERTFSVRVFGTDSCERLDF---NPESTNKGE 314
>gi|297844594|ref|XP_002890178.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336020|gb|EFH66437.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 133
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 51 NGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
NG W V++KK G V+ GW++FV+ + G + F Y+ TF I+ C
Sbjct: 46 NGRSWTVRVKKRGENVFLTLGWENFVKDNNLEDGKHLNFIYDRQRTFYVIIFGHNMC 102
>gi|212276168|ref|NP_001130957.1| hypothetical protein [Zea mays]
gi|194690554|gb|ACF79361.1| unknown [Zea mays]
gi|223944169|gb|ACN26168.1| unknown [Zea mays]
gi|407232594|gb|AFT82639.1| ABI36 ABI3VP1 type transcription factor, partial [Zea mays subsp.
mays]
gi|413920729|gb|AFW60661.1| hypothetical protein ZEAMMB73_443682 [Zea mays]
Length = 503
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 11 PRFVKAVLP--STLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKL--KKEGRKV 66
P+F K P ST R + P + N+ +++ + + + P+G WQ L + E
Sbjct: 98 PQFFKVFFPEQSTERLRIPPMFNQHLKE--QQPTGAVSLRGPSGNRWQAALASESESEAA 155
Query: 67 W-FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA 106
W FD GW++FV +S +G ++F + + F ++ +
Sbjct: 156 WCFDQGWKEFVTDHSLRLGHFLVFTRDGPAQFSVAVFSSSG 196
>gi|297811963|ref|XP_002873865.1| hypothetical protein ARALYDRAFT_350906 [Arabidopsis lyrata subsp.
lyrata]
gi|297319702|gb|EFH50124.1| hypothetical protein ARALYDRAFT_350906 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 11 PRFVKAVLPSTLRDQKPR-IPNKIVRKFSHELSDVAHIT-IPNGYVWQVKLKKEGRKVWF 68
P F K + + R IP+ ++R S + S + +P G WQVK+ K +
Sbjct: 17 PAFFKILRREDFSSEMMRMIPHHLIRSISDKSSSFKMVLRVPWGSSWQVKISKNPIFHYM 76
Query: 69 DD-GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
+D GW FV + + F +E+N F I++ E+ P
Sbjct: 77 EDRGWNQFVNDNGLGLNEFLTFTHEANMCFNVTIFEADGTEMLRP 121
>gi|9295721|gb|AAF87027.1|AC006535_5 T24P13.6 [Arabidopsis thaliana]
Length = 984
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W VK+ +G K+ DGW+DF A+ G +V+F E F + CEI Y +
Sbjct: 58 TWLVKM--DGLKL--TDGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQYHT 113
Query: 114 S 114
S
Sbjct: 114 S 114
>gi|27754629|gb|AAO22760.1| unknown protein [Arabidopsis thaliana]
Length = 920
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W VK+ +G K+ DGW+DF A+ G +V+F E F + CEI Y +
Sbjct: 58 TWLVKM--DGLKL--TDGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQYHT 113
Query: 114 S 114
S
Sbjct: 114 S 114
>gi|30689588|ref|NP_173990.2| B3 domain-containing protein REM17 [Arabidopsis thaliana]
gi|238065255|sp|Q84WP3.2|REM17_ARATH RecName: Full=B3 domain-containing protein REM17; AltName:
Full=Protein REPRODUCTIVE MERISTEM 17
gi|332192599|gb|AEE30720.1| B3 domain-containing protein REM17 [Arabidopsis thaliana]
Length = 920
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W VK+ +G K+ DGW+DF A+ G +V+F E F + CEI Y +
Sbjct: 58 TWLVKM--DGLKL--TDGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQYHT 113
Query: 114 S 114
S
Sbjct: 114 S 114
>gi|413920728|gb|AFW60660.1| hypothetical protein ZEAMMB73_443682 [Zea mays]
Length = 411
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 11 PRFVKAVLP--STLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKL--KKEGRKV 66
P+F K P ST R + P + N+ +++ + + + P+G WQ L + E
Sbjct: 98 PQFFKVFFPEQSTERLRIPPMFNQHLKE--QQPTGAVSLRGPSGNRWQAALASESESEAA 155
Query: 67 W-FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA 106
W FD GW++FV +S +G ++F + + F ++ +
Sbjct: 156 WCFDQGWKEFVTDHSLRLGHFLVFTRDGPAQFSVAVFSSSG 196
>gi|224120512|ref|XP_002331066.1| predicted protein [Populus trichocarpa]
gi|222872996|gb|EEF10127.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
F +GW+DFV+ YS L++FEY+ NS + + E C P+S
Sbjct: 6 FQNGWEDFVDLYSLKKRDLLVFEYKGNSKYSVFVCKEMDCPAGDPNS 52
>gi|297821799|ref|XP_002878782.1| hypothetical protein ARALYDRAFT_901047 [Arabidopsis lyrata subsp.
lyrata]
gi|297324621|gb|EFH55041.1| hypothetical protein ARALYDRAFT_901047 [Arabidopsis lyrata subsp.
lyrata]
Length = 595
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD + IT W+VK+ +G+++ DGW++F ++ +G +V+F E + F +
Sbjct: 105 SDASKIT------WEVKI--DGQRL--TDGWKEFALSHDLRIGDIVVFRQERDMCFHVTM 154
Query: 102 YDETACEINYPSSNEESHTNGE 123
+ CEI Y S + + G+
Sbjct: 155 LGPSCCEIQYGSCLDNKNNLGK 176
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPN--GYVWQVKLK 60
+ SS P FV V S+LRD + +P VR+ + + I + N G W + LK
Sbjct: 187 TESSSLDPSCFVANVTVSSLRDDRLNLPRSFVRENGLD-TRCGEIVLMNEKGRTWTLDLK 245
Query: 61 --KEGRKVWFDDGWQDFVEAYSTFVGSLVLFE 90
K R + GW+ F A GS+ F+
Sbjct: 246 GNKSYRTTYIKQGWRSFCHANGLRAGSIFTFK 277
>gi|356538853|ref|XP_003537915.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing protein
REM20-like [Glycine max]
Length = 302
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVR--KFSHELSDVAHITIPNGYVWQVKLKKE 62
+ E P F K LP ++ IPN VR + + + + +G VW VK +
Sbjct: 3 TGAERYPDFFKVFLPER-HSERMLIPNAFVRLPQLQGRIPEDVILRNASGRVWHVKTRYV 61
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
K++FDDGW F E ++F+++ ++ F+ I + T C+
Sbjct: 62 X-KLYFDDGWNAFHEENCLGHADFLVFKHDRSNEFKVVILESSTQCQ 107
>gi|42569291|ref|NP_180046.2| B3 domain-containing protein REM10 [Arabidopsis thaliana]
gi|347602439|sp|P0DH85.1|REM10_ARATH RecName: Full=B3 domain-containing protein REM10; AltName:
Full=Protein REPRODUCTIVE MERISTEM 10
gi|330252526|gb|AEC07620.1| B3 domain-containing protein REM10 [Arabidopsis thaliana]
Length = 555
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
W+VK+ +GR++ +GW+DF A+ VG +V+F E F + CEI Y
Sbjct: 57 WKVKI--DGRRL--SNGWEDFTIAHDLRVGDIVVFRQEGELVFHVTALGPSCCEIQY 109
>gi|79495605|ref|NP_195054.2| B3 domain-containing protein REM16 [Arabidopsis thaliana]
gi|75159005|sp|Q8RYD1.1|REM16_ARATH RecName: Full=B3 domain-containing protein REM16; AltName:
Full=Auxin response factor 36; AltName: Full=Protein
REPRODUCTIVE MERISTEM 16
gi|20145851|emb|CAD29616.1| auxin response factor 36 [Arabidopsis thaliana]
gi|332660801|gb|AEE86201.1| B3 domain-containing protein REM16 [Arabidopsis thaliana]
Length = 337
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 27 PRIPNKIV--RKFS----HELSDVAHITIPNGYVWQVKLKKEGRKVW-FDDGWQDFVEAY 79
P N++V RKFS +L + + P+G + V ++++ K F GW FV+ +
Sbjct: 31 PGFHNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDH 90
Query: 80 STFVGSLVLFEYESNSTFQAHIYD-ETACE---------INYPSSNEESHTNGEESHH 127
S L++F++ S F+ ++D +T CE + + SHT E+ H
Sbjct: 91 SLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEH 148
>gi|297802532|ref|XP_002869150.1| hypothetical protein ARALYDRAFT_912952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314986|gb|EFH45409.1| hypothetical protein ARALYDRAFT_912952 [Arabidopsis lyrata subsp.
lyrata]
Length = 373
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
PPRF K V S +P L + P G W V ++V F
Sbjct: 9 PPRFFK-VFVSHFTSDSMMLPIAYYGHLPSRLHKTVILRGPGGCSWNVATTINEKEVHFS 67
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
GW FVE + G ++ F Y + F+ IY
Sbjct: 68 QGWAKFVEDNTLSDGDILTFVYNGDHVFEVSIY 100
>gi|297825487|ref|XP_002880626.1| hypothetical protein ARALYDRAFT_901062 [Arabidopsis lyrata subsp.
lyrata]
gi|297326465|gb|EFH56885.1| hypothetical protein ARALYDRAFT_901062 [Arabidopsis lyrata subsp.
lyrata]
Length = 631
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD + IT W+VK+ +G+++ DGW++F ++ +G +V+F E + F +
Sbjct: 163 SDASKIT------WEVKI--DGQRL--TDGWKEFALSHDLRIGDIVVFRQERDMCFHVTM 212
Query: 102 YDETACEINYPSSNEESHTNGE 123
+ CEI Y S + + G+
Sbjct: 213 LGPSCCEIQYGSCLDNKNNLGK 234
>gi|356553751|ref|XP_003545216.1| PREDICTED: B3 domain-containing protein REM20-like [Glycine max]
Length = 281
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 21/100 (21%)
Query: 9 IPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWF 68
IP FVK+ R Q RIP ++ L++V VW VK + G K++F
Sbjct: 22 IPDAFVKST-----RLQGWRIPEDVI------LTNVGR------RVWNVKTRLVGNKIYF 64
Query: 69 DDGWQDFVEAYSTFVGS--LVLFEYESNSTFQAHIYDETA 106
++GW+ F E F+G ++F+Y+ + F+ I ++++
Sbjct: 65 EEGWKVFQE--ENFLGKEDYLVFKYDGANIFKVVILEQSS 102
>gi|168059954|ref|XP_001781964.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666537|gb|EDQ53188.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 718
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 3 SPSSPEIPPRFVKAV-LPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
S + P + P F++ + L ST + P IP+ V+ L I P+ W V ++
Sbjct: 24 SDAIPFLSPSFLRRIGLDST--ECMP-IPSSFVKANIKTLGTSLTIEGPSTDKWTVAVEG 80
Query: 62 EGRK--VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
K + GW +FV+ + +G +LF +++S FQ I+DE+ C+
Sbjct: 81 SFAKHNISLRLGWVNFVKDHHLQLGDQLLFTLKTDSYFQVEIFDESGCK 129
>gi|125528765|gb|EAY76879.1| hypothetical protein OsI_04836 [Oryza sativa Indica Group]
Length = 673
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP R + ++ G W+V+L + F GW++FV + VG ++
Sbjct: 96 IPLPFARTITDMTGSNVYLEDAYGLRWRVRLYLHDDVLSFGHGWKNFVLDHDISVGEFLV 155
Query: 89 FEYESNSTFQAHIYDETACE 108
F + S F I+ +ACE
Sbjct: 156 FRQIARSVFTVQIFAISACE 175
>gi|115441697|ref|NP_001045128.1| Os01g0905400 [Oryza sativa Japonica Group]
gi|75321160|sp|Q5N6V0.1|Y1054_ORYSJ RecName: Full=B3 domain-containing protein Os01g0905400
gi|56784544|dbj|BAD82806.1| unknown protein [Oryza sativa Japonica Group]
gi|113534659|dbj|BAF07042.1| Os01g0905400 [Oryza sativa Japonica Group]
gi|125573024|gb|EAZ14539.1| hypothetical protein OsJ_04461 [Oryza sativa Japonica Group]
gi|215693372|dbj|BAG88754.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 673
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP R + ++ G W+V+L + F GW++FV + VG ++
Sbjct: 96 IPLPFARTITDMTGSNVYLEDAYGLRWRVRLYLHDDVLSFGHGWKNFVLDHDISVGEFLV 155
Query: 89 FEYESNSTFQAHIYDETACE 108
F + S F I+ +ACE
Sbjct: 156 FRQIARSVFTVQIFAISACE 175
>gi|297798610|ref|XP_002867189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313025|gb|EFH43448.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK-VWFDDG 71
F + +LP + IP K +L + + P+G + V+++++ K + F G
Sbjct: 25 FTQLLLPGF--HYRLAIPQKFSTHCKRKLPQIVTLKSPSGATYSVRVEEDDEKTLAFGFG 82
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
W FV+ +S L++F++ S F+ ++D +T CE
Sbjct: 83 WDKFVKDHSLEENDLLVFKFHGLSEFEVLVFDGQTLCE 120
>gi|255562719|ref|XP_002522365.1| conserved hypothetical protein [Ricinus communis]
gi|223538443|gb|EEF40049.1| conserved hypothetical protein [Ricinus communis]
Length = 306
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 6 SPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEGR 64
+P+ F K ++ + +K IP V K+ + + + N G V +K
Sbjct: 10 NPDRKITFFKVLMGDYM--EKIMIPPAFVMKYEKIMPETIKLKSYNVGKSSMVSVKSNDD 67
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTN 121
+ GW+ FV+ ++ VG ++F +++TF+ IY T C ++++ H +
Sbjct: 68 GFFIKHGWKKFVKDHNLEVGDFLVFNLVNDTTFEVLIYGPTCCLKKIKLADDDDHVD 124
>gi|226510566|ref|NP_001144632.1| uncharacterized protein LOC100277651 [Zea mays]
gi|195644876|gb|ACG41906.1| hypothetical protein [Zea mays]
Length = 498
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 11 PRFVKAVLP--STLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKL--KKEGRKV 66
P+F K P ST R + P + N+ +++ + + + P+G WQ L + E
Sbjct: 98 PQFFKVFFPEQSTERLRIPTMFNQHLKE--QQPTGAVSLRGPSGNRWQAALASESESEAA 155
Query: 67 W-FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA 106
W F+ GW++FV +S +G ++F + + F ++ +
Sbjct: 156 WCFEQGWKEFVTDHSLRLGHFLVFTRDGPAQFSVAVFSSSG 196
>gi|297790434|ref|XP_002863108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308930|gb|EFH39367.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
W VK+ +G + DGW+DF ++ +G +V+F +E F + CEI Y +S
Sbjct: 72 WLVKM--DGLNL--TDGWEDFAFSHDLRIGDIVVFRHEGEMVFHVTALGPSCCEIQYYTS 127
>gi|15238713|ref|NP_197301.1| VERDANDI protein [Arabidopsis thaliana]
gi|75171036|sp|Q9FJG2.1|Y5800_ARATH RecName: Full=B3 domain-containing protein At5g18000
gi|9757892|dbj|BAB08399.1| unnamed protein product [Arabidopsis thaliana]
gi|110742346|dbj|BAE99096.1| hypothetical protein [Arabidopsis thaliana]
gi|332005111|gb|AED92494.1| VERDANDI protein [Arabidopsis thaliana]
Length = 307
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 29 IPNKIVRKFSHELSDVAHIT-IPNGYVWQVKLKKEGRKVWFDD-GWQDFVEAYSTFVGSL 86
IP+ ++R S + S + +P G WQVK+ K + +D GW FV
Sbjct: 37 IPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLGENEY 96
Query: 87 VLFEYESNSTFQAHIYDETACEINYP 112
+ F +E+N F I++ E+ P
Sbjct: 97 LTFTHEANMCFNVTIFEADGTEMLRP 122
>gi|357517569|ref|XP_003629073.1| hypothetical protein MTR_8g072820 [Medicago truncatula]
gi|355523095|gb|AET03549.1| hypothetical protein MTR_8g072820 [Medicago truncatula]
Length = 114
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 56 QVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
+VK++KE KV+F DGW + Y+ G+ V Y + S + D EI YP
Sbjct: 49 EVKVEKENGKVYFKDGWHRLSDVYNVTSGAWVTLTYLNPSLCLIKLKDLYNVEIEYP 105
>gi|4490295|emb|CAB38786.1| hypothetical protein [Arabidopsis thaliana]
gi|7270276|emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 6 SPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK 65
SP+I +K +T + IP K +L + + P+G + V ++++ K
Sbjct: 88 SPKIANSSIKI---TTFCNLLQVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEK 144
Query: 66 VW-FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACE 108
F GW FV+ +S L++F++ S F+ ++D +T CE
Sbjct: 145 TMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCE 189
>gi|125527555|gb|EAY75669.1| hypothetical protein OsI_03575 [Oryza sativa Indica Group]
gi|125571875|gb|EAZ13390.1| hypothetical protein OsJ_03308 [Oryza sativa Japonica Group]
Length = 703
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 37 FSHELSDVAHITIPN--GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESN 94
F L A T+ N G W V+L+K V+ GW FVE S +LF Y+ N
Sbjct: 24 FDASLPSSAKGTLQNSEGKTWPVELEKLDGHVFLTTGWAKFVEDNSLREYEFLLFRYDDN 83
Query: 95 STFQAHIYDETACE 108
F + ACE
Sbjct: 84 MHFMVLPFGLNACE 97
>gi|297811077|ref|XP_002873422.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319259|gb|EFH49681.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 13 FVKAVLPSTLRDQKPR-IPNKIVRKFS-HELSDVAHITIPNGYVWQVKLKKEGRKVWFD- 69
FVK + + + R IP VR FS +ELS I + G W+VK+ K R + +
Sbjct: 19 FVKLLKHFDMSSENTRAIPYDFVRNFSDNELSGNMKIRVQWGNSWKVKISKNPRFYFMEK 78
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
GW+ FV + + F ++ +F +I+++ E+ P
Sbjct: 79 SGWETFVRDNALGDYEFLTFTHKGKMSFTVNIFNKDGKEMMQP 121
>gi|238481412|ref|NP_001154745.1| Transcriptional factor B3 family protein [Arabidopsis thaliana]
gi|347602375|sp|F4KFT6.1|REML3_ARATH RecName: Full=B3 domain-containing protein REM-like 3; AltName:
Full=Protein REPRODUCTIVE MERISTEM-like 3
gi|332006500|gb|AED93883.1| Transcriptional factor B3 family protein [Arabidopsis thaliana]
Length = 530
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD IT W++K+ +GR++ GW++F A++ V +++F +E N F
Sbjct: 50 SDATEIT------WKIKI--DGRRM--TKGWEEFAVAHNLQVDDILVFRHEGNLLFHVTP 99
Query: 102 YDETACEINYPSSNEE 117
+ + CEI Y +E+
Sbjct: 100 FGLSFCEILYSQRDEK 115
>gi|75106456|sp|Q5JNA1.1|Y1237_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|57899544|dbj|BAD87058.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 719
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 37 FSHELSDVAHITIPN--GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESN 94
F L A T+ N G W V+L+K V+ GW FVE S +LF Y+ N
Sbjct: 40 FDASLPSSAKGTLQNSEGKTWPVELEKLDGHVFLTTGWAKFVEDNSLREYEFLLFRYDDN 99
Query: 95 STFQAHIYDETACE 108
F + ACE
Sbjct: 100 MHFMVLPFGLNACE 113
>gi|115484575|ref|NP_001067431.1| Os11g0197600 [Oryza sativa Japonica Group]
gi|122208042|sp|Q2R9D2.1|Y1176_ORYSJ RecName: Full=B3 domain-containing protein Os11g0197600
gi|108864092|gb|ABA91888.2| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113644653|dbj|BAF27794.1| Os11g0197600 [Oryza sativa Japonica Group]
gi|215678868|dbj|BAG95305.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695287|dbj|BAG90478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 406
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
VL + ++ +IP+ + ++ + + + +G W +L + +F GW++FV
Sbjct: 35 VLLTLQSLERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFV 94
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYD 103
S G ++F Y+ S F +++
Sbjct: 95 RDNSIQCGQFLVFTYDKRSQFSVTVFE 121
>gi|222615672|gb|EEE51804.1| hypothetical protein OsJ_33271 [Oryza sativa Japonica Group]
Length = 422
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
VL + ++ +IP+ + ++ + + + +G W +L + +F GW++FV
Sbjct: 51 VLLTLQSMERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFV 110
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYD 103
S G ++F Y+ S F +++
Sbjct: 111 RDNSIQCGQFLVFTYDKRSQFSVTVFE 137
>gi|125538485|gb|EAY84880.1| hypothetical protein OsI_06245 [Oryza sativa Indica Group]
Length = 289
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDE-TACEINY 111
+W VK+ + + GW F A+ G L++F Y+ + F ++D+ T C Y
Sbjct: 63 MWDVKVVADDGGAYLGRGWLRFARAHGLRDGDLLVFRYDGAAAFTVTVFDDGTMCRRAY 121
>gi|168061855|ref|XP_001782901.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665623|gb|EDQ52301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1183
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 11 PRFVKAVLPSTLRDQKPR---IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P F++A+ S L IP+ ++ E+ + A + P+G WQV + GR W
Sbjct: 34 PCFMRALCDSNLAAMATCWMVIPSAWLKLHGDEVGNSAVLHGPSGNTWQVGV---GRPKW 90
Query: 68 --FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
F GW+ F G +++F S F I+D
Sbjct: 91 VAFRVGWRTFAADNGLEKGDILVFTLIGKSEFAVRIFD 128
>gi|334188512|ref|NP_001190577.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
gi|332009900|gb|AED97283.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
Length = 300
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-----EGRK 65
P+F K LP D +P R L + + +G +W+++LKK + K
Sbjct: 12 PKFFKVYLPDESGDDMV-LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEK 70
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACEINYPSSNE 116
+GW+ V+ G + FE++ +S F IY+ T C+ SS++
Sbjct: 71 FVMVNGWKRIVKDEDLKGGDFLEFEFDGSSCFHFCIYEHRTMCKKIRRSSDQ 122
>gi|218185410|gb|EEC67837.1| hypothetical protein OsI_35443 [Oryza sativa Indica Group]
Length = 422
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
VL + ++ +IP+ + ++ + + + +G W +L + +F GW++FV
Sbjct: 51 VLLTLQSLERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFV 110
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYD 103
S G ++F Y+ S F +++
Sbjct: 111 RDNSIQCGQFLVFTYDKRSQFSVTVFE 137
>gi|75180650|sp|Q9LVG1.1|Y5013_ARATH RecName: Full=B3 domain-containing protein At5g60130
gi|8777352|dbj|BAA96942.1| unnamed protein product [Arabidopsis thaliana]
Length = 326
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-----EGRK 65
P+F K LP D +P R L + + +G +W+++LKK + K
Sbjct: 12 PKFFKVYLPDESGDDMV-LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEK 70
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACEINYPSSNE 116
+GW+ V+ G + FE++ +S F IY+ T C+ SS++
Sbjct: 71 FVMVNGWKRIVKDEDLKGGDFLEFEFDGSSCFHFCIYEHRTMCKKIRRSSDQ 122
>gi|357476971|ref|XP_003608771.1| Pectinesterase/pectinesterase inhibitor [Medicago truncatula]
gi|355509826|gb|AES90968.1| Pectinesterase/pectinesterase inhibitor [Medicago truncatula]
Length = 409
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
+++ R+P R F ++ + PN +V ++K KV+FDDGW Y
Sbjct: 310 EREGRLPACFARGFGLQVGPFVILRDPNQNEIEVAVEKRNGKVYFDDGWAVLKNFYRILA 369
Query: 84 GSLVLFEYESNSTFQAH 100
GS + TFQ+
Sbjct: 370 GSWITGSCLDLETFQSQ 386
>gi|62734620|gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa Japonica Group]
Length = 363
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 36/76 (47%)
Query: 28 RIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+IP+ + ++ + + + +G W +L + +F GW++FV S G +
Sbjct: 3 KIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFL 62
Query: 88 LFEYESNSTFQAHIYD 103
+F Y+ S F +++
Sbjct: 63 VFTYDKRSQFSVTVFE 78
>gi|388520837|gb|AFK48480.1| unknown [Medicago truncatula]
Length = 232
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 45/117 (38%), Gaps = 16/117 (13%)
Query: 11 PRFVKAVLPSTLRDQKP-RIPNKIVRKFS--HELSDVAHITIPN--GYVWQVK---LKKE 62
P FVK + + + RIP R+FS H D +T+ N G W V K
Sbjct: 118 PYFVKILKNGNVGGSRTLRIP----RRFSAAHLPDDKTEVTLRNSRGECWTVNSVPYAKR 173
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESH 119
G F GW FV G +FE S+ Q HIY IN N+ H
Sbjct: 174 GMLHTFCGGWMSFVRDNGVNFGDTCIFELVSDYVMQVHIYGVGKESIN----NQNGH 226
>gi|326529825|dbj|BAK08192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 26 KPRIPNKIVRKFSH-------ELSDVAHITIPNGYVWQVK--LKKEGRKVWFDDGWQDFV 76
+ R+P+K R +L D H W VK L +G ++ GW+ F
Sbjct: 20 RLRLPDKFTRVLLDGFKPKEVKLRDAGHGR----RFWDVKVVLDADG-HMYLGRGWEQFA 74
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
A+ +G ++F Y+ ++ ++D + C +Y
Sbjct: 75 RAHDLRLGYFLVFSYDGDAVLTIKVFDMSMCRRHY 109
>gi|357437301|ref|XP_003588926.1| hypothetical protein MTR_1g015350 [Medicago truncatula]
gi|355477974|gb|AES59177.1| hypothetical protein MTR_1g015350 [Medicago truncatula]
Length = 174
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 35/124 (28%)
Query: 19 PSTLRDQKPRIPNKIVRKFSHELSDVAH----ITIPNGYVW--------------QVKLK 60
P R + P K+++ FS + + H I +W +++LK
Sbjct: 3 PRRRRSVQSLAPEKVIKTFSESHNSLTHSCHSIMKSTVNLWLKITFGVGNFKSKREMELK 62
Query: 61 KEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY----PSSNE 116
+ G V+F + WQ+F+E YS G +++F D T+ I Y PS+N
Sbjct: 63 RWGNGVFFCNKWQEFIEYYSIGYGCVIIF-------------DVTSVGICYPFKTPSTNR 109
Query: 117 ESHT 120
E +T
Sbjct: 110 EPNT 113
>gi|218193332|gb|EEC75759.1| hypothetical protein OsI_12654 [Oryza sativa Indica Group]
Length = 380
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-EGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P + F+ +S+ ++ P+ W + + + ++ GW++FV+ G +
Sbjct: 46 VPARFANNFNGHISEEVNLRSPSSETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCL 105
Query: 88 LFEYES-NSTFQAHIYDETACEINYP 112
L Y +S+F I+D + CE P
Sbjct: 106 LVRYSGVSSSFDVLIFDPSGCEKASP 131
>gi|297796975|ref|XP_002866372.1| hypothetical protein ARALYDRAFT_496153 [Arabidopsis lyrata subsp.
lyrata]
gi|297312207|gb|EFH42631.1| hypothetical protein ARALYDRAFT_496153 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 52 GYVWQVKLKKEGRKV---WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETAC 107
G VW++ L+K G +V +GW+ V G L+ FE++ + F IY+ ET C
Sbjct: 52 GKVWKLVLRKCGGEVERFVMVNGWKKIVRDEDLKGGDLLAFEFDGSRCFNLCIYERETMC 111
Query: 108 EINYPSSNE-----ESHTNGEE 124
+ SS + E ++GEE
Sbjct: 112 KKLKRSSEQSEEIIEVGSDGEE 133
>gi|358249299|ref|NP_001239771.1| uncharacterized protein LOC100813851 [Glycine max]
gi|255645943|gb|ACU23460.1| unknown [Glycine max]
Length = 410
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
DQ +P +L + + P G +W + + ++F GW+ FV+ +
Sbjct: 35 DQHLALPKTFSDNLKKKLPENVTLKGPGGVMWNIGMTTRDDTLYFGHGWEQFVKDHCLKE 94
Query: 84 GSLVLFEYESNSTFQAHIYDETAC-EINYPSS--------NEESHTNG 122
++F+Y S + D + E N PS+ + +H NG
Sbjct: 95 NDFLVFKYNGGSLNKKRDTDNDSLEEGNIPSNAGVECALHEKSAHVNG 142
>gi|297842091|ref|XP_002888927.1| hypothetical protein ARALYDRAFT_339541 [Arabidopsis lyrata subsp.
lyrata]
gi|297334768|gb|EFH65186.1| hypothetical protein ARALYDRAFT_339541 [Arabidopsis lyrata subsp.
lyrata]
Length = 338
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP L A + G +W+V +K + KV+F+ GW +FV + +
Sbjct: 28 IPISYYEHLPRRLPKTAILMGTGGKIWKVAMKSKHEKVYFERGWANFVADNALKDAEFLS 87
Query: 89 FEYESNSTFQAHIYDETACEIN 110
F ++ + IY EIN
Sbjct: 88 FVFDGYRRYAVSIYGYGEKEIN 109
>gi|399920210|gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 29 IPNKIVRKFSHELSDVAHITIPN-GYVWQVKLKKEG--RKVWFDDGWQDFVE 77
+PN V K ++++ + IPN G W+++L+K +++W + GW++F +
Sbjct: 1682 LPNAAVGKHGDKIAEHIFLRIPNCGKPWEIQLRKSTYHQQIWLEKGWEEFAK 1733
>gi|357439319|ref|XP_003589936.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
gi|355478984|gb|AES60187.1| B3 domain-containing transcription factor VRN1 [Medicago
truncatula]
Length = 130
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 40 ELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQA 99
ELS + ++ G +V K + DGW +F Y+ L+ + Y NS FQ
Sbjct: 57 ELSLLWYLKYGYGNCHEVIFNKSILMPFLTDGWHEFRNFYNITTNPLMSYTYLGNSVFQI 116
Query: 100 HIYDETACEINYP 112
I+ + +I YP
Sbjct: 117 KIFSGSTTKIEYP 129
>gi|145352786|ref|NP_195166.2| AP2/B3 domain-containing protein [Arabidopsis thaliana]
gi|238056748|sp|Q9SZ05.2|Y3440_ARATH RecName: Full=B3 domain-containing protein At4g34400
gi|225898849|dbj|BAH30555.1| hypothetical protein [Arabidopsis thaliana]
gi|332660968|gb|AEE86368.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
Length = 397
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
++PPRF V S + IP H + P G W+V + + +V
Sbjct: 11 QLPPRFF-TVFVSHFSSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVL 69
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
F GW FV + G + F Y F+ I+
Sbjct: 70 FSQGWPKFVRDNTLNDGDFLTFAYNGAHIFEVSIF 104
>gi|414868755|tpg|DAA47312.1| TPA: hypothetical protein ZEAMMB73_810794 [Zea mays]
Length = 193
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK--EGRKVWFDDGWQDFVEAYSTFVGSL 86
IP K V + +L++ + P+G W V + + + ++ GW DF A+ L
Sbjct: 12 IPEKFVSDPNGQLTETLSLKSPSGATWLVDVARNADADELLLGSGWGDFARAHELQEDDL 71
Query: 87 VLF------EYESNSTFQAHIYDETACE 108
V+F S +F + D + CE
Sbjct: 72 VVFTRGGGGGSGSGCSFDVLVLDSSGCE 99
>gi|4455185|emb|CAB36717.1| putative protein [Arabidopsis thaliana]
gi|7270390|emb|CAB80157.1| putative protein [Arabidopsis thaliana]
Length = 389
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
++PPRF V S + IP H + P G W+V + + +V
Sbjct: 11 QLPPRFF-TVFVSHFSSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVL 69
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
F GW FV + G + F Y F+ I+
Sbjct: 70 FSQGWPKFVRDNTLNDGDFLTFAYNGAHIFEVSIF 104
>gi|297825733|ref|XP_002880749.1| hypothetical protein ARALYDRAFT_901324 [Arabidopsis lyrata subsp.
lyrata]
gi|297326588|gb|EFH57008.1| hypothetical protein ARALYDRAFT_901324 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W+VK+ +G+++ +GW +F A+ +G +++F E + TF + + EI Y S
Sbjct: 30 TWKVKI--DGQRL--TNGWTEFALAHDLRIGDIIVFRQERSMTFHVTMLGPSCYEIQYVS 85
Query: 114 SNEESHTNGE 123
+ + G+
Sbjct: 86 CLDNQNNLGK 95
>gi|428673324|gb|EKX74237.1| conserved hypothetical protein [Babesia equi]
Length = 336
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 34 VRKFSHELS---DVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV---GSLV 87
V FSH S DVA+ + Y VK+K R VW G Q F +S + + +
Sbjct: 146 VYTFSHLFSYPFDVAYTRLATNYSGSVKIKSHLRSVWNTKGMQGFYSGFSLCLMSTATYL 205
Query: 88 LFEYESNSTFQAHIYDETACEIN 110
L + N FQ + + EI+
Sbjct: 206 LITFPLNEKFQYKLIESVNDEIS 228
>gi|21636171|gb|AAM69851.1| unknown [Aegilops tauschii]
Length = 304
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQ-AHIYDETACEINYP 112
+W V+L E ++ W+ F AY +LF Y+ ++T +++ T C + Y
Sbjct: 63 LWDVELVIEEGHMYLCRSWEKFYSAYDLRTEYFLLFRYDDDATMLIVKVFNTTMCRMRY- 121
Query: 113 SSNEESHTNGEES 125
+++E NG S
Sbjct: 122 -ADDEDAGNGSSS 133
>gi|449469761|ref|XP_004152587.1| PREDICTED: uncharacterized protein LOC101210561 [Cucumis sativus]
Length = 566
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 52 GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE-IN 110
G W + + + F +GW F + G ++F Y + F IY +T CE I
Sbjct: 69 GEQWNITVSDCEGSLAFQEGWNAFSSEHGLETGDFLIFNYIMDLHFNVSIYTKTGCEKIE 128
Query: 111 YP 112
+P
Sbjct: 129 FP 130
>gi|449503722|ref|XP_004162144.1| PREDICTED: uncharacterized protein LOC101229838 [Cucumis sativus]
Length = 565
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 52 GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE-IN 110
G W + + + F +GW F + G ++F Y + F IY +T CE I
Sbjct: 69 GEQWNITVSDCEGSLAFQEGWNAFSSEHGLETGDFLIFNYIMDLHFNVSIYTKTGCEKIE 128
Query: 111 YP 112
+P
Sbjct: 129 FP 130
>gi|124361161|gb|ABN09133.1| hypothetical protein MtrDRAFT_AC174467g8v1 [Medicago truncatula]
Length = 217
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 32 KIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSL-VLFE 90
+ V K+ +L D +I +G + Q+K K DGW D ++ Y F ++ ++F
Sbjct: 26 EFVEKYKDDLQDPWNIMNMDGGMHQIKFKMSMYNPTLKDGW-DPLQQYHHFPDNVDIIFG 84
Query: 91 YESNSTFQAHIYDETACEINYPSSNEES 118
Y N+ F+ ++ E C PS + S
Sbjct: 85 YYGNNLFKVIMFREVFCATKIPSFHSRS 112
>gi|218191104|gb|EEC73531.1| hypothetical protein OsI_07927 [Oryza sativa Indica Group]
Length = 972
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 52 GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
G +++L + F +GW FV + G +LFEY STF ++ +CE
Sbjct: 317 GKCSKIRLSVVDGSLAFYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGIDSCE 373
>gi|356564219|ref|XP_003550353.1| PREDICTED: B3 domain-containing protein REM16-like [Glycine max]
Length = 405
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 24 DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
DQ +P +L + + P G VW + + ++F GW+ FV+ +
Sbjct: 35 DQHLALPKAFSDNLKKKLPENVTLKGPGGVVWNIGMTTRDDTLYFVHGWEQFVKDHCLKE 94
Query: 84 GSLVLFEY--ESNSTFQAHIYDETACEINYPSSN 115
++F+Y ES+ + + + E N P SN
Sbjct: 95 NDFLVFKYNGESHLNKKRDTDNNSLEEGNIPPSN 128
>gi|115447101|ref|NP_001047330.1| Os02g0598200 [Oryza sativa Japonica Group]
gi|75125337|sp|Q6K5K2.1|Y2982_ORYSJ RecName: Full=B3 domain-containing protein Os02g0598200
gi|47847640|dbj|BAD22126.1| unknown protein [Oryza sativa Japonica Group]
gi|113536861|dbj|BAF09244.1| Os02g0598200 [Oryza sativa Japonica Group]
gi|215768515|dbj|BAH00744.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1048
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
F +GW FV + G +LFEY STF ++ +CE
Sbjct: 431 FYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGIDSCE 471
>gi|125582752|gb|EAZ23683.1| hypothetical protein OsJ_07385 [Oryza sativa Japonica Group]
Length = 1070
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 52 GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
G +++L + F +GW FV + G +LFEY STF ++ +CE
Sbjct: 415 GKCSKIRLSVVDGSLAFYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGIDSCE 471
>gi|357476653|ref|XP_003608612.1| hypothetical protein MTR_4g098240 [Medicago truncatula]
gi|355509667|gb|AES90809.1| hypothetical protein MTR_4g098240 [Medicago truncatula]
Length = 318
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 19 PSTLR------DQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
PST R +K ++P R++ E++ + + P+ ++V ++K+ KV+F DGW
Sbjct: 70 PSTYRFRLNLFQRKAKLPACFSREYGMEVAPLVMLRDPSRNEFEVMIEKKNGKVYFTDGW 129
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
+ Y S + Y + + F E YP
Sbjct: 130 ATMKDFYIITACSWMTVIYANRNLFLFRGVTRKEREFLYP 169
>gi|357475323|ref|XP_003607947.1| hypothetical protein MTR_4g085790 [Medicago truncatula]
gi|355509002|gb|AES90144.1| hypothetical protein MTR_4g085790 [Medicago truncatula]
Length = 223
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 32 KIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSL-VLFE 90
+ V K+ +L D +I +G + Q+K K DGW+ ++ Y F ++ ++F
Sbjct: 32 EFVEKYKDDLQDPWNIMNMDGGMHQIKFKMSLYNPTLKDGWEP-LQQYHHFPNNVDIIFG 90
Query: 91 YESNSTFQAHIYDETACEINYPSSNEES 118
Y N+ F+ ++ E C PS + S
Sbjct: 91 YYGNNLFKVIMFREVFCATKIPSFHSRS 118
>gi|15232646|ref|NP_190261.1| B3 domain-containing protein REM22 [Arabidopsis thaliana]
gi|75207664|sp|Q9STF1.1|REM22_ARATH RecName: Full=B3 domain-containing protein REM22; AltName:
Full=Protein REPRODUCTIVE MERISTEM 22
gi|5541682|emb|CAB51188.1| putative protein [Arabidopsis thaliana]
gi|332644681|gb|AEE78202.1| B3 domain-containing protein REM22 [Arabidopsis thaliana]
Length = 276
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 48 TIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETA 106
++ +G +W++++K G V+ DGW+ V+ + + FE++ F +Y+ +
Sbjct: 58 SVSSGNIWRMEMKANGNTVFLRDGWKKIVKDENVTEPIFLEFEFDGYGVFHFCVYEYGSM 117
Query: 107 CE-INYPSSNEESHTNGEE 124
C+ + P E + EE
Sbjct: 118 CKRMRSPMEKEVIKVDSEE 136
>gi|297796681|ref|XP_002866225.1| hypothetical protein ARALYDRAFT_332063 [Arabidopsis lyrata subsp.
lyrata]
gi|297312060|gb|EFH42484.1| hypothetical protein ARALYDRAFT_332063 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLK-KEGRKVWFD 69
P F+K + S Q+ IP + + + L A + P G W VK + + F
Sbjct: 11 PDFLK-IFNSHEHAQRLVIPRGYNKYYPNPLPQTAVLKKPEGSFWNVKWTISQEETIRFQ 69
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY------DETACEINYPSSNEESHTNGE 123
+GW+ FV+ +LF Y+ +F I+ + TA S++E T G
Sbjct: 70 EGWEKFVKDNGLIDRDFLLFTYDGCRSFWVRIHRNGLPLEPTAPIKIQEISDDEDDTIGH 129
Query: 124 ESHH 127
HH
Sbjct: 130 GDHH 133
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,248,579,993
Number of Sequences: 23463169
Number of extensions: 89990383
Number of successful extensions: 145126
Number of sequences better than 100.0: 402
Number of HSP's better than 100.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 144536
Number of HSP's gapped (non-prelim): 602
length of query: 127
length of database: 8,064,228,071
effective HSP length: 93
effective length of query: 34
effective length of database: 10,177,120,650
effective search space: 346022102100
effective search space used: 346022102100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)