BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040084
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L3W1|VRN1_ARATH B3 domain-containing transcription factor VRN1 OS=Arabidopsis
thaliana GN=VRN1 PE=1 SV=1
Length = 341
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 72/105 (68%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDD 70
P F K + ST+++++ R+P+K V KF ELS +T+P+G+VW+V L+K K+WF D
Sbjct: 4 PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQD 63
Query: 71 GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSN 115
GWQ+FV+ YS +G L++F YE NS F +I++ + EINY S+
Sbjct: 64 GWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTG 108
>sp|Q9ZSH7|Y4158_ARATH B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana
GN=At4g01580 PE=2 SV=1
Length = 190
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 3 SPSSPEIP-PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
S PE P +F K VLPST++D+ RIP + V+ +LS+V + P GY +KLK+
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKR 78
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
G ++WF +GW +F EA+S G +LFEY+ NS+F+ I++ +ACE NYP
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129
>sp|Q84R27|Y3896_ARATH B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana
GN=At3g18960 PE=2 SV=1
Length = 209
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 3 SPSSPEIP-PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK 61
S PE P +F K VLPST++D+ +IP + V+ +LS+V + P G+ +KLK+
Sbjct: 19 SQQDPESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKR 78
Query: 62 EGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYP 112
G ++WF +GW +F EA+S G +LFEY+ NS+F+ I++ +ACE YP
Sbjct: 79 IGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129
>sp|Q9XIB4|Y1475_ARATH B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana
GN=At1g49475 PE=2 SV=2
Length = 190
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDG 71
+F+K +L S + ++ ++P + VR F +L+D + P G+ +++K+ G +VWF+ G
Sbjct: 33 KFIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 91
Query: 72 WQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
W +F EA+S G + F YE +S F+ I+D +A EI YP +++ N EE
Sbjct: 92 WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPL--DDTDDNREE 142
>sp|Q2QMT6|Y1208_ORYSJ B3 domain-containing protein LOC_Os12g40080 OS=Oryza sativa subsp.
japonica GN=Os12g0591400 PE=3 SV=1
Length = 490
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K R F ++S + NG ++V++ KE + GW+ F AY G +++
Sbjct: 41 IPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILV 100
Query: 89 FEYESNSTFQAHIYDETACEINYPS 113
F Y NS F+ IYD +ACE P
Sbjct: 101 FIYSGNSHFKVWIYDPSACEKGLPC 125
>sp|Q67VL7|Y6325_ORYSJ Putative B3 domain-containing protein Os06g0632500 OS=Oryza sativa
subsp. japonica GN=Os06g0632500 PE=3 SV=1
Length = 393
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAH----ITIPNGYVWQVKLKKEGRKV 66
PRF+K + L +K +IP K V++ E H I P G W+V+L++E V
Sbjct: 142 PRFIKLLQQEDL--EKMKIPEKFVQQHLTETYTNNHQNAIIVCPLGKFWRVELQREQPDV 199
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
DGW F+ A+ G+++LF YE N F ++ + C Y ++
Sbjct: 200 LLRDGWAPFLAAHDLSEGNILLFRYEGNMVFTVEVFLQNGCLKEYKTA 247
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 50 PNGYVWQVKLKKEGR---KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA 106
P G VW+V+L++ + W GW + A+ G V+ E ++D
Sbjct: 65 PLGKVWRVELRRSPAGDGEAWLGGGWSELAAAHGLGEGWGVVLRLERRGVASLRVFDPGF 124
Query: 107 C 107
C
Sbjct: 125 C 125
>sp|Q7XS75|Y4469_ORYSJ Putative B3 domain-containing protein Os04g0346900 OS=Oryza sativa
subsp. japonica GN=Os04g0346900 PE=3 SV=2
Length = 427
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F+ +LP + K RIP+K VR + + S++A I P G W+V+L K+ V+
Sbjct: 141 PQFLTVLLPGIM--DKMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQSGVF 198
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
GW F+ + G +V+F YE N F+ ++
Sbjct: 199 LGGGWLQFLSFHGISRGDVVIFRYEGNLVFKISVF 233
>sp|Q7XS74|Y4474_ORYSJ Putative B3 domain-containing protein Os04g0347400 OS=Oryza sativa
subsp. japonica GN=Os04g0347400 PE=3 SV=3
Length = 434
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P+F++ +LP + +K RIP K V+ + H +A I P G W+++L+K+ ++
Sbjct: 151 PQFLRVLLPGFM--EKMRIPAKFVQHYIAEEHLNIHMASILSPLGKFWRIELEKDELGMF 208
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESHH 127
F GW F+ + G +VL +E N F+ ++ C+ + + ++ + + H
Sbjct: 209 FKGGWLQFLSFHGISPGDVVLLRHEGNLVFKIKVFGINGCKKDLKTKDDITIQQSARNQH 268
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 47 ITIPNGYVWQVKLKKEGRK----VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
+ P G VW V++ ++ + GW +F A+ +G V+ +E ++
Sbjct: 62 VVSPVGKVWDVEVGRDDDGDGGGAFLGRGWAEFAAAHGLGMGWFVVVRHEGGGVLTVKLF 121
Query: 103 DETAC 107
D T C
Sbjct: 122 DTTCC 126
>sp|Q9SB80|REM5_ARATH B3 domain-containing protein REM5 OS=Arabidopsis thaliana GN=REM5
PE=2 SV=1
Length = 352
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P F + +LP +IP K K HE + V + P+ W+VK+ EG K+
Sbjct: 12 PHFFQPILPGF--KSHIKIPVKFFSKHIEGKHEGNTVYLRSYPSRRTWKVKM--EGHKL- 66
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS-----NEESHTNG 122
+GW++FVEA+ VG V+F+++ + F + CE+ Y S NEES G
Sbjct: 67 -TEGWKEFVEAHDLRVGDFVVFKHKGDMLFHVTAIGPSCCEVQYAPSRSHDRNEESDEIG 125
Query: 123 EESHH 127
E S +
Sbjct: 126 ESSRN 130
>sp|Q851V5|Y3216_ORYSJ Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa
subsp. japonica GN=Os03g0621600 PE=3 SV=1
Length = 1029
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP+K R F +S + +GY + V++ K+ + GW+ FV A+ +G ++
Sbjct: 467 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 526
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEES 118
F+Y + Q I+D + CE + S E +
Sbjct: 527 FKYNGDFLLQVLIFDPSGCEKSTSCSMENA 556
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
V+ R Q IP K F ++ + NG V + K K+ GW +F
Sbjct: 153 VMIGGFRRQMT-IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFA 211
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
++ +G ++F Y NS F+ I+D + C
Sbjct: 212 NSHDIKMGDFLVFRYTGNSQFEVKIFDPSGC 242
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPN+ ++ F ++ + + +G + V++ K K+ GW+ FV A+ +G ++
Sbjct: 748 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 807
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
F Y+ S + I+ + CE + S ++ T+ E
Sbjct: 808 FSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGE 843
>sp|Q2QMT7|Y1214_ORYSJ B3 domain-containing protein Os12g0591400 OS=Oryza sativa subsp.
japonica GN=Os12g0591300 PE=2 SV=1
Length = 661
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 41 LSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAH 100
+S VA + +P+G + V++ KE ++ F GW+ F AY G ++ F Y NS F+
Sbjct: 226 ISGVAKLEVPDGKTYDVEISKEHNELVFRSGWEVFAIAYELEQGDILAFGYSGNSHFKVQ 285
Query: 101 IYDETACE 108
I++ + CE
Sbjct: 286 IFNPSNCE 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K ++S+V + +PNG + V++ KE ++ GW F Y +++
Sbjct: 19 VPTKFANFIRGQISEVVKLEVPNGKTYDVQVAKEHNELVLRSGWGAFARDYELKQCDILV 78
Query: 89 FEYESNSTFQAHIYDETACE 108
F Y +S F+ I++ + CE
Sbjct: 79 FAYSGSSRFKVRIFNPSGCE 98
>sp|Q8S2E6|Y1235_ORYSJ B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp.
japonica GN=Os01g0723500 PE=2 SV=1
Length = 402
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFS--HELSDVAHITIPNGYVWQVKLKKEGRK 65
+IPP F K IP + RK E S A + P+G W V +++
Sbjct: 34 KIPPNFCK------------HIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTAEG 81
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+F GW FV+ + V+F Y+ N+ F A ++D TACE
Sbjct: 82 TFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFDRTACE 124
>sp|Q851W5|Y3204_ORYSJ B3 domain-containing protein Os03g0620400 OS=Oryza sativa subsp.
japonica GN=Os03g0620400 PE=2 SV=1
Length = 519
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + F LS + P G V+ VK+ + K GW+ FV+A+ +L
Sbjct: 43 IPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D CE
Sbjct: 103 FRHIENSRFEVLILDSDGCE 122
>sp|O81778|REM9_ARATH B3 domain-containing protein REM9 OS=Arabidopsis thaliana GN=REM9
PE=2 SV=1
Length = 461
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 39 HELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQ 98
HE V T + W+VK+ EG ++ +GW++FVEA+ +G V+F +E + F
Sbjct: 41 HEGKTVTLRTDASERTWEVKM--EGHRL--TEGWKEFVEAHDLRIGDFVVFRHEGDMVFH 96
Query: 99 AHIYDETACEINYPSSN 115
+ CEI YP S+
Sbjct: 97 VTALGPSCCEIQYPQSS 113
>sp|Q851V1|Y3160_ORYSJ Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa
subsp. japonica GN=Os03g0621600 PE=3 SV=1
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 14 VKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQ 73
V ++P IPN+ + F ++ + +G + V++ K +V GW
Sbjct: 31 VLCLMPIMYMASHKTIPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWA 90
Query: 74 DFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V A+ +G ++F+Y +S + I+D + CE
Sbjct: 91 SYVSAHDLKIGDFLVFKYSGDSQLKTLIFDSSGCE 125
>sp|Q10GP0|Y3198_ORYSJ Putative B3 domain-containing protein Os03g0619850 OS=Oryza sativa
subsp. japonica GN=Os03g0619850 PE=3 SV=1
Length = 253
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP++ V F ++ + PNG ++ V++ + K GW+ FV+A+ VG +L
Sbjct: 43 IPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS F+ I D E
Sbjct: 103 FRHIENSCFEVMILDSDGSE 122
>sp|Q10GM4|Y3221_ORYSJ B3 domain-containing protein Os03g0622100 OS=Oryza sativa subsp.
japonica GN=Os03g0622100 PE=2 SV=1
Length = 382
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLK-KEGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P++ F+ +S+V ++ P+G W + + + ++ GW++FV+A +
Sbjct: 46 VPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDCL 105
Query: 88 LFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEE 124
LF Y S+F I+D + CE P E EE
Sbjct: 106 LFRYSGVSSFDVLIFDPSGCEKASPHFVENRGFGREE 142
>sp|Q6AV22|Y3196_ORYSJ B3 domain-containing protein Os03g0619600 OS=Oryza sativa subsp.
japonica GN=Os03g0619600 PE=2 SV=1
Length = 536
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P K V F + S + PNG ++ V++ K K GW+ FV+A+ +L
Sbjct: 43 MPCKFVNHFGGDFSGTIKLQSPNGILYVVEVTKCKNKTVLRCGWEAFVDAHHIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F NS F+ I+D CE
Sbjct: 103 FRCVENSRFEVLIFDSDDCE 122
>sp|Q10Q26|Y3123_ORYSJ B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp.
japonica GN=Os03g0212300 PE=2 SV=1
Length = 270
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFS-HELSDVAHITIPNGYVWQVKLKKEGRKVW---- 67
F + +LP + + K ++P K R+ EL + ++++ EGR+ W
Sbjct: 15 FFRIILPGSSK-TKLKLPYKFARELGDRELREA-----------RLRVAGEGRRPWDVKV 62
Query: 68 FDD----------GWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
FDD GWQ+F A+ G ++F Y+ + F ++DET C +Y
Sbjct: 63 FDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDETMCRRDY 116
>sp|Q2QMT2|Y1223_ORYSJ B3 domain-containing protein Os12g0592300 OS=Oryza sativa subsp.
japonica GN=Os12g0592300 PE=2 SV=2
Length = 358
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K+ +FS +++ ++ P+G W+V ++K ++ GW+DF +A+ L+
Sbjct: 42 IPEKVADRFSGQITKGFNLKAPSGETWRVSVEKVADELILMSGWEDFAKAHELQENDLLF 101
Query: 89 FEYESNS----TFQAHIYDETACE 108
F +F I+D + CE
Sbjct: 102 FTCNGRCNGSFSFDVLIFDASGCE 125
>sp|Q6AV21|Y3982_ORYSJ B3 domain-containing protein Os03g0619800 OS=Oryza sativa subsp.
japonica GN=Os03g0619800 PE=2 SV=1
Length = 536
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
+P++ V F ++ + PNG ++ V++ + K GW+ FV+A++ G +L
Sbjct: 43 MPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLL 102
Query: 89 FEYESNSTFQAHIYDETACE 108
F + NS ++ I D CE
Sbjct: 103 FRHIENSRYEVLILDSDDCE 122
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 41 LSDVAHITI---PNGYVWQVKLKKEGR----KVWF-DDGWQDFVEAYSTFVGSLVLFE-- 90
L D H T+ G +WQ+ L R K WF GW+ F VG LFE
Sbjct: 455 LPDKNHQTLVLQCKGMIWQINLVVRRRYTKGKRWFLTAGWRKFAHDNRLRVGDFCLFELK 514
Query: 91 YESNSTFQAHI 101
+ T + HI
Sbjct: 515 KKKKLTMEVHI 525
>sp|Q851W4|Y3205_ORYSJ B3 domain-containing protein Os03g0620500 OS=Oryza sativa subsp.
japonica GN=Os03g0620500 PE=2 SV=1
Length = 545
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IPNK + +F ++S + P G V+ VK+ K K GW+ FV+A+ +L
Sbjct: 43 IPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLL 102
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEE 117
F + NS + + + A I+ SS +
Sbjct: 103 FRHIKNSRRASGVQERNADPIDVSSSTHD 131
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 54 VWQVKLK-KEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNS 95
WQVK++ + G F GW+DFV + LF+ NS
Sbjct: 486 AWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLTKNS 528
>sp|Q2QMT5|Y1209_ORYSJ B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp.
japonica GN=Os12g0591500 PE=2 SV=1
Length = 334
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP K+ FS +++ ++ P+G W+V + K ++ GW+DF +A+ L+
Sbjct: 22 IPEKVAEIFSGQITKGFNLKSPSGETWRVGVAKVADELILKSGWEDFAKAHELQENDLLF 81
Query: 89 FEY----ESNSTFQAHIYDETACE 108
F + +F I+D + CE
Sbjct: 82 FTCNGHGNGSCSFDVLIFDASGCE 105
>sp|Q1PES7|Y3622_ARATH B3 domain-containing protein At3g06220 OS=Arabidopsis thaliana
GN=At3g06220 PE=2 SV=1
Length = 174
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 5 SSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGR 64
+S ++ PRF L S + IP L A +T G VW+V + +
Sbjct: 2 ASGDVLPRFYTVFL-SCVSSNSLLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKRE 60
Query: 65 KVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+ GW++FV G + F ++ +++ IY +C+
Sbjct: 61 QVYLARGWENFVADNELKDGEFLTFVFDGYKSYEVSIYGRGSCK 104
>sp|Q8H2D1|REM8_ARATH B3 domain-containing protein REM8 OS=Arabidopsis thaliana GN=REM8
PE=2 SV=1
Length = 462
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVWFD 69
F K +LP R+ IP K + HE V + W+VK+ +G ++
Sbjct: 14 FFKPLLPGFQRN--LNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKM--DGNRL--T 67
Query: 70 DGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPSS 114
+GW++FVEA+ + V+F +E + F + CEI YP S
Sbjct: 68 EGWKEFVEAHDLRIRDFVVFRHEGDMVFHVTALGPSCCEIQYPQS 112
>sp|O23076|REM15_ARATH Putative B3 domain-containing protein REM15 OS=Arabidopsis thaliana
GN=REM15.15 PE=3 SV=2
Length = 528
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W+VK+ +G+++ DGW++F ++ +G +V+F ES+ F + + C I Y S
Sbjct: 48 TWEVKI--DGQRL--TDGWKEFAVSHDLRIGDIVVFRQESDLAFHVTLLGPSCCGIQYGS 103
Query: 114 SNEESHTNGEE 124
+ E + G+E
Sbjct: 104 CSVEKNNLGDE 114
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 4/129 (3%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI-PNGYVW--QVKL 59
+ SS + P FV V PS+LR +P + +R+ + I I G W +K+
Sbjct: 270 AESSSQDPSCFVANVSPSSLRYDTLYLPKRFMRENGVDKRCGEMILINEKGKSWTLDLKV 329
Query: 60 KKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEY-ESNSTFQAHIYDETACEINYPSSNEES 118
KK GW+ F A GS++ + + +T + E N S
Sbjct: 330 KKSSGTSLIKRGWRSFCSANGLRAGSIITLKLIKKRATLVLRLIPNEPEEANEVVSLSTE 389
Query: 119 HTNGEESHH 127
+ EES H
Sbjct: 390 QESDEESIH 398
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPN--GYVWQVKLK 60
+ SS P FV V PS+LR R P VR + + I + N G W L+
Sbjct: 126 AESSSRDPSCFVANVAPSSLRYDLMRFPRGFVR--DNGVVGSGEIVLMNEKGRSWNFNLR 183
Query: 61 KE--GRKVWFDDGWQDFVEAYSTFVG 84
++ V+ GW F +A G
Sbjct: 184 QKPSNGTVYVRGGWVSFCDANGLKAG 209
>sp|Q6Z0D2|Y8251_ORYSJ Putative B3 domain-containing protein Os08g0325100 OS=Oryza sativa
subsp. japonica GN=Os08g0325100 PE=3 SV=1
Length = 391
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V++ ++ + + N + V++ K KV F GW FV+ + +G ++
Sbjct: 49 IPKEFVQRLKGDIPEEIQLETHNRNSYTVRVDKSQEKVIFAAGWAQFVKTFDLHMGDSMM 108
Query: 89 FEYESNSTFQAHIYDETACE 108
F ++ NS F I+D+ E
Sbjct: 109 FRFKGNSQFDVIIFDQVGRE 128
>sp|Q6Z0D9|Y8347_ORYSJ B3 domain-containing protein Os08g0324300 OS=Oryza sativa subsp.
japonica GN=Os08g0324300 PE=2 SV=1
Length = 270
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP + V++ ++ + N V++ K KV F +GW FV+ + +G ++
Sbjct: 40 IPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMM 99
Query: 89 FEYESNSTFQAHIYD----ETAC 107
F + NS F I D E AC
Sbjct: 100 FRFNGNSQFDVIIVDQIGREKAC 122
>sp|Q8GYM4|REM14_ARATH B3 domain-containing protein REM14 OS=Arabidopsis thaliana GN=REM14
PE=2 SV=2
Length = 490
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
I + +K + SD + IT W+VK+ +G+++ DGW++F ++ +G +V+
Sbjct: 29 IEGRYEQKTAELRSDASKIT------WEVKI--DGQRL--TDGWKEFALSHDLRIGDIVV 78
Query: 89 FEYESNSTFQAHIYDETACEINYPSSNEE 117
F E + +F + + CEI Y S ++E
Sbjct: 79 FRQERDMSFHVTMLGPSCCEIQYGSCSDE 107
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 10 PPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITI-PNGYVW--QVKLKKEGRKV 66
P FV V PSTLR +P + +R+ + I + G W +KLKK
Sbjct: 234 PSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTS 293
Query: 67 WFDDGWQDFVEAYSTFVGSLVLFEYESNS-----TFQAHIYDETAC----EINYPSSNEE 117
GW+ F A GS++ F+ S ++ +E C E+ S+++E
Sbjct: 294 LIRRGWRSFCSANGLRAGSIITFKLIKKSGTLVLCLLSNEPEEEVCSEANEVESLSTDQE 353
Query: 118 SHTNGEESHH 127
SH EES H
Sbjct: 354 SH---EESSH 360
>sp|Q8H2D0|REM7_ARATH B3 domain-containing protein REM7 OS=Arabidopsis thaliana GN=REM7
PE=2 SV=1
Length = 251
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY-P 112
WQVK+ +GR++ GW++F A+ VG +++F +E + F + CEI Y P
Sbjct: 56 TWQVKI--QGRRLTV--GWKEFASAHDFRVGDIIVFRHEGSLVFHVTALGPSCCEIQYVP 111
Query: 113 SSNEE 117
S N +
Sbjct: 112 SCNNQ 116
>sp|Q7XFU9|Y1030_ORYSJ B3 domain-containing protein Os10g0323000 OS=Oryza sativa subsp.
japonica GN=Os10g0323000 PE=2 SV=1
Length = 272
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 26 KPRIPNKIVRKFSHELSDVAHITI--PNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFV 83
+P P + R H D H+T+ N V+L+K G+ + GW+ FVE V
Sbjct: 54 EPLPPEIVARCNGH---DGKHLTLVTRNSKPVNVRLEKRGQSFYISKGWKKFVELTDLRV 110
Query: 84 GSLVLFEYESNSTFQAHIYDETACEINYPSSNEESHTNGEESHH 127
G V F S ST I D+ + P S + + S H
Sbjct: 111 GQCVRFSVSSPSTLDLLILDKHGTSLAIPPSKRDLKLKSKRSTH 154
>sp|Q9FX77|Y1664_ARATH B3 domain-containing protein At1g16640 OS=Arabidopsis thaliana
GN=At1g16640 PE=1 SV=1
Length = 134
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 51 NGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC 107
+G W V++KK G KV+ GW++FV+ + G + F Y+ + TF IY C
Sbjct: 46 SGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQFIYDRDRTFYVIIYGHNMC 102
>sp|Q10GM3|Y3222_ORYSJ B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp.
japonica GN=Os03g0622200 PE=2 SV=1
Length = 378
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-EGRKVWFDDGWQDFVEAYSTFVGSLV 87
+P + F+ +S+ ++ P+G W + + + ++ GW++FV+ G +
Sbjct: 46 VPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCL 105
Query: 88 LFEYES-NSTFQAHIYDETACEINYP 112
LF Y +S+F I+D + CE P
Sbjct: 106 LFRYSGVSSSFDVLIFDPSGCEKASP 131
>sp|Q9M8K2|REM21_ARATH B3 domain-containing protein REM21 OS=Arabidopsis thaliana GN=REM21
PE=2 SV=1
Length = 330
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 3 SPSSPEIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKE 62
S +S ++ PRF L S + IP L A + G W+V + +
Sbjct: 15 SMASGDVLPRFFTVFL-SHCSSESMVIPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSK 73
Query: 63 GRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
+V+F+ GW +FV G + F ++ + +++ IY C+
Sbjct: 74 QEQVYFEQGWGNFVADNQLKEGEFLTFVFDGHKSYEVSIYGRGDCK 119
>sp|Q8LAV5|REM20_ARATH B3 domain-containing protein REM20 OS=Arabidopsis thaliana GN=REM20
PE=2 SV=1
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
E+ PRF K L + + IP + + L + G +W V LKK +
Sbjct: 6 ELYPRFFKVFLVES-ASESLMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAY 64
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD 103
GW F E + G + F Y+ + TF+ ++D
Sbjct: 65 LTRGWPKFAEEHELKNGEFMTFVYDGHRTFEVSVFD 100
>sp|Q9FGD2|Y5698_ARATH Putative B3 domain-containing protein At5g66980 OS=Arabidopsis
thaliana GN=At5g66980 PE=3 SV=1
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 12 RFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRK----VW 67
+F K LP + IP + L A + G +W V+ K E + V+
Sbjct: 9 QFFKVFLPE-FGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVF 67
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETAC--EINYPSSNEESHTNGEE 124
F GWQ F S G ++F Y+ +S F I+ C ++ S+ + S + +E
Sbjct: 68 FTKGWQSFANDQSLEFGDFLVFSYDGDSRFSVTIFANDGCKKDVGVVSTTDRSRVSLDE 126
>sp|Q7XGM6|Y1086_ORYSJ Putative B3 domain-containing protein Os10g0158600 OS=Oryza sativa
subsp. japonica GN=Os10g0158600 PE=3 SV=1
Length = 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 13 FVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGW 72
F A L +T + P +P + + + D + +G ++++K+ ++ GW
Sbjct: 6 FASARLNATNQSYLP-VPITLATAYEMQHGDSLRLKTSHGLKIKIRIKEAASTLYMTTGW 64
Query: 73 QDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETA---CEINYPSSN 115
++F EA G +LF S S + + + C + PS+
Sbjct: 65 KEFAEATGLETGETILFRMSSRSKARVMLLNRQCLIRCPVKTPSTT 110
>sp|Q84WP3|REM17_ARATH B3 domain-containing protein REM17 OS=Arabidopsis thaliana GN=REM17
PE=2 SV=2
Length = 920
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 54 VWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINYPS 113
W VK+ +G K+ DGW+DF A+ G +V+F E F + CEI Y +
Sbjct: 58 TWLVKM--DGLKL--TDGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQYHT 113
Query: 114 S 114
S
Sbjct: 114 S 114
>sp|P0DH85|REM10_ARATH B3 domain-containing protein REM10 OS=Arabidopsis thaliana GN=REM10
PE=2 SV=1
Length = 555
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 55 WQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACEINY 111
W+VK+ +GR++ +GW+DF A+ VG +V+F E F + CEI Y
Sbjct: 57 WKVKI--DGRRL--SNGWEDFTIAHDLRVGDIVVFRQEGELVFHVTALGPSCCEIQY 109
>sp|Q8RYD1|REM16_ARATH B3 domain-containing protein REM16 OS=Arabidopsis thaliana GN=REM16
PE=2 SV=1
Length = 337
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 27 PRIPNKIV--RKFS----HELSDVAHITIPNGYVWQVKLKKEGRKVW-FDDGWQDFVEAY 79
P N++V RKFS +L + + P+G + V ++++ K F GW FV+ +
Sbjct: 31 PGFHNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDH 90
Query: 80 STFVGSLVLFEYESNSTFQAHIYD-ETACE---------INYPSSNEESHTNGEESHH 127
S L++F++ S F+ ++D +T CE + + SHT E+ H
Sbjct: 91 SLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEH 148
>sp|Q5N6V0|Y1054_ORYSJ B3 domain-containing protein Os01g0905400 OS=Oryza sativa subsp.
japonica GN=Os01g0905400 PE=2 SV=1
Length = 673
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 29 IPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVL 88
IP R + ++ G W+V+L + F GW++FV + VG ++
Sbjct: 96 IPLPFARTITDMTGSNVYLEDAYGLRWRVRLYLHDDVLSFGHGWKNFVLDHDISVGEFLV 155
Query: 89 FEYESNSTFQAHIYDETACE 108
F + S F I+ +ACE
Sbjct: 156 FRQIARSVFTVQIFAISACE 175
>sp|Q9FJG2|Y5800_ARATH B3 domain-containing protein At5g18000 OS=Arabidopsis thaliana
GN=At5g18000 PE=2 SV=1
Length = 307
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 29 IPNKIVRKFSHELSDVAHIT-IPNGYVWQVKLKKEGRKVWFDD-GWQDFVEAYSTFVGSL 86
IP+ ++R S + S + +P G WQVK+ K + +D GW FV
Sbjct: 37 IPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLGENEY 96
Query: 87 VLFEYESNSTFQAHIYDETACEINYP 112
+ F +E+N F I++ E+ P
Sbjct: 97 LTFTHEANMCFNVTIFEADGTEMLRP 122
>sp|F4KFT6|REML3_ARATH B3 domain-containing protein REM-like 3 OS=Arabidopsis thaliana
GN=At5g32460 PE=3 SV=1
Length = 530
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 42 SDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHI 101
SD IT W++K+ +GR++ GW++F A++ V +++F +E N F
Sbjct: 50 SDATEIT------WKIKI--DGRRM--TKGWEEFAVAHNLQVDDILVFRHEGNLLFHVTP 99
Query: 102 YDETACEINYPSSNEE 117
+ + CEI Y +E+
Sbjct: 100 FGLSFCEILYSQRDEK 115
>sp|Q5JNA1|Y1237_ORYSJ B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp.
japonica GN=Os01g0723700 PE=2 SV=1
Length = 719
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 37 FSHELSDVAHITIPN--GYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESN 94
F L A T+ N G W V+L+K V+ GW FVE S +LF Y+ N
Sbjct: 40 FDASLPSSAKGTLQNSEGKTWPVELEKLDGHVFLTTGWAKFVEDNSLREYEFLLFRYDDN 99
Query: 95 STFQAHIYDETACE 108
F + ACE
Sbjct: 100 MHFMVLPFGLNACE 113
>sp|Q2R9D2|Y1176_ORYSJ B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp.
japonica GN=Os11g0197600 PE=2 SV=1
Length = 406
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 17 VLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVWFDDGWQDFV 76
VL + ++ +IP+ + ++ + + + +G W +L + +F GW++FV
Sbjct: 35 VLLTLQSLERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFV 94
Query: 77 EAYSTFVGSLVLFEYESNSTFQAHIYD 103
S G ++F Y+ S F +++
Sbjct: 95 RDNSIQCGQFLVFTYDKRSQFSVTVFE 121
>sp|Q9LVG1|Y5013_ARATH B3 domain-containing protein At5g60130 OS=Arabidopsis thaliana
GN=At5g60130 PE=2 SV=1
Length = 326
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKK-----EGRK 65
P+F K LP D +P R L + + +G +W+++LKK + K
Sbjct: 12 PKFFKVYLPDESGDDMV-LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEK 70
Query: 66 VWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETACEINYPSSNE 116
+GW+ V+ G + FE++ +S F IY+ T C+ SS++
Sbjct: 71 FVMVNGWKRIVKDEDLKGGDFLEFEFDGSSCFHFCIYEHRTMCKKIRRSSDQ 122
>sp|Q9SZ05|Y3440_ARATH B3 domain-containing protein At4g34400 OS=Arabidopsis thaliana
GN=At4g34400 PE=2 SV=2
Length = 397
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 8 EIPPRFVKAVLPSTLRDQKPRIPNKIVRKFSHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
++PPRF V S + IP H + P G W+V + + +V
Sbjct: 11 QLPPRFF-TVFVSHFSSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVL 69
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIY 102
F GW FV + G + F Y F+ I+
Sbjct: 70 FSQGWPKFVRDNTLNDGDFLTFAYNGAHIFEVSIF 104
>sp|Q6K5K2|Y2982_ORYSJ B3 domain-containing protein Os02g0598200 OS=Oryza sativa subsp.
japonica GN=Os02g0598200 PE=2 SV=1
Length = 1048
Score = 35.4 bits (80), Expect = 0.096, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYDETACE 108
F +GW FV + G +LFEY STF ++ +CE
Sbjct: 431 FYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGIDSCE 471
>sp|Q9STF1|REM22_ARATH B3 domain-containing protein REM22 OS=Arabidopsis thaliana GN=REM22
PE=2 SV=1
Length = 276
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 48 TIPNGYVWQVKLKKEGRKVWFDDGWQDFVEAYSTFVGSLVLFEYESNSTFQAHIYD-ETA 106
++ +G +W++++K G V+ DGW+ V+ + + FE++ F +Y+ +
Sbjct: 58 SVSSGNIWRMEMKANGNTVFLRDGWKKIVKDENVTEPIFLEFEFDGYGVFHFCVYEYGSM 117
Query: 107 CE-INYPSSNEESHTNGEE 124
C+ + P E + EE
Sbjct: 118 CKRMRSPMEKEVIKVDSEE 136
>sp|O81782|REM6_ARATH B3 domain-containing protein REM6 OS=Arabidopsis thaliana GN=REM6
PE=3 SV=1
Length = 493
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 11 PRFVKAVLPSTLRDQKPRIPNKIVRKF---SHELSDVAHITIPNGYVWQVKLKKEGRKVW 67
P F + +LP IP K K+ HE V + + W+VK+ EG +
Sbjct: 12 PHFFQPLLPGF--KSHINIPVKFFSKYIKGKHEGKTVKLRSDSSKRTWKVKI--EGHTL- 66
Query: 68 FDDGWQDFVEAYSTFVGSLVLFEYESNSTF 97
DGW++FVEA+ + V+F+++ + F
Sbjct: 67 -TDGWKEFVEAHDLRISDFVIFKHKGDMFF 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,756,831
Number of Sequences: 539616
Number of extensions: 2110133
Number of successful extensions: 3359
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3283
Number of HSP's gapped (non-prelim): 88
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)