Query 040085
Match_columns 316
No_of_seqs 216 out of 1215
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 04:58:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040085.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040085hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02276 gibberellin 20-oxidas 100.0 1.8E-77 3.8E-82 557.7 31.7 294 8-304 39-339 (361)
2 PTZ00273 oxidase reductase; Pr 100.0 1.3E-76 2.8E-81 545.5 32.1 295 7-304 3-311 (320)
3 PLN02216 protein SRG1 100.0 1.4E-76 3E-81 550.5 29.6 294 8-313 51-355 (357)
4 PLN03002 oxidoreductase, 2OG-F 100.0 7.6E-76 1.6E-80 541.4 32.2 289 7-304 12-320 (332)
5 PLN02254 gibberellin 3-beta-di 100.0 4.6E-76 9.9E-81 546.3 29.7 278 8-304 55-344 (358)
6 PLN02758 oxidoreductase, 2OG-F 100.0 6.6E-76 1.4E-80 546.7 30.5 288 7-304 50-346 (361)
7 PLN02997 flavonol synthase 100.0 1E-75 2.3E-80 537.7 30.9 282 7-304 30-316 (325)
8 PLN02485 oxidoreductase 100.0 1.5E-75 3.3E-80 540.1 30.9 298 6-304 4-325 (329)
9 PLN02515 naringenin,2-oxogluta 100.0 2.5E-75 5.4E-80 541.4 31.0 286 8-304 36-329 (358)
10 PLN02750 oxidoreductase, 2OG-F 100.0 2.3E-75 4.9E-80 541.2 30.7 293 7-304 24-328 (345)
11 PLN02393 leucoanthocyanidin di 100.0 8.4E-75 1.8E-79 539.9 29.6 288 7-304 49-347 (362)
12 PLN02365 2-oxoglutarate-depend 100.0 2.1E-74 4.5E-79 525.2 31.2 290 7-315 3-298 (300)
13 PLN02904 oxidoreductase 100.0 1.5E-74 3.2E-79 536.4 30.3 284 8-304 50-341 (357)
14 PLN03178 leucoanthocyanidin di 100.0 8.4E-75 1.8E-79 539.9 28.4 288 7-304 45-345 (360)
15 PLN02912 oxidoreductase, 2OG-F 100.0 1.3E-74 2.9E-79 535.5 29.3 284 7-304 39-332 (348)
16 COG3491 PcbC Isopenicillin N s 100.0 2.2E-74 4.7E-79 504.9 28.3 295 7-304 3-314 (322)
17 PLN02639 oxidoreductase, 2OG-F 100.0 3.1E-74 6.8E-79 532.0 30.4 290 7-313 35-335 (337)
18 PLN02947 oxidoreductase 100.0 1.7E-74 3.7E-79 538.2 27.3 292 7-312 64-368 (374)
19 PLN02156 gibberellin 2-beta-di 100.0 8.5E-74 1.8E-78 526.3 30.1 281 7-304 24-314 (335)
20 PLN02299 1-aminocyclopropane-1 100.0 6.8E-74 1.5E-78 525.3 29.3 281 7-304 4-294 (321)
21 PLN02704 flavonol synthase 100.0 2E-73 4.3E-78 526.2 28.6 282 7-304 40-332 (335)
22 PLN00417 oxidoreductase, 2OG-F 100.0 4.5E-73 9.7E-78 525.3 30.1 286 7-303 42-336 (348)
23 KOG0143 Iron/ascorbate family 100.0 1.7E-72 3.7E-77 514.6 29.6 287 7-304 15-310 (322)
24 PLN02403 aminocyclopropanecarb 100.0 1E-69 2.2E-74 493.2 28.5 271 9-304 2-282 (303)
25 PLN02984 oxidoreductase, 2OG-F 100.0 2.3E-68 4.9E-73 491.4 29.6 269 7-304 36-324 (341)
26 PLN03001 oxidoreductase, 2OG-F 100.0 3.6E-62 7.7E-67 435.1 23.1 236 61-304 2-249 (262)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 9.6E-26 2.1E-30 172.2 8.9 95 170-268 2-98 (98)
28 PF14226 DIOX_N: non-haem diox 99.9 1.4E-24 3E-29 170.9 9.2 110 10-125 1-116 (116)
29 PLN03176 flavanone-3-hydroxyla 99.8 2.1E-19 4.5E-24 141.4 10.3 79 8-89 36-115 (120)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 97.0 0.00061 1.3E-08 51.5 3.2 79 172-267 1-100 (100)
31 PRK05467 Fe(II)-dependent oxyg 95.9 0.069 1.5E-06 46.7 9.3 49 206-267 129-177 (226)
32 smart00702 P4Hc Prolyl 4-hydro 95.3 0.18 3.9E-06 42.2 9.5 104 144-267 61-178 (178)
33 PF12851 Tet_JBP: Oxygenase do 95.2 0.26 5.7E-06 41.2 10.2 70 187-267 85-170 (171)
34 TIGR02466 conserved hypothetic 87.2 9 0.0002 32.9 10.4 36 217-264 160-196 (201)
35 PF13759 2OG-FeII_Oxy_5: Putat 81.7 2 4.4E-05 32.2 3.7 37 216-264 63-100 (101)
36 PRK15401 alpha-ketoglutarate-d 79.3 10 0.00022 32.9 7.5 78 172-264 118-210 (213)
37 PF13532 2OG-FeII_Oxy_2: 2OG-F 74.8 5.5 0.00012 33.5 4.7 85 171-264 98-193 (194)
38 PF07350 DUF1479: Protein of u 72.8 3.1 6.8E-05 39.6 2.9 54 7-69 47-100 (416)
39 PRK08130 putative aldolase; Va 68.6 7.4 0.00016 33.6 4.2 50 9-66 127-178 (213)
40 PRK08333 L-fuculose phosphate 67.1 8.4 0.00018 32.4 4.1 49 9-65 120-170 (184)
41 PRK05874 L-fuculose-phosphate 57.7 21 0.00045 31.0 4.9 37 9-53 127-163 (217)
42 TIGR02624 rhamnu_1P_ald rhamnu 51.6 26 0.00056 31.6 4.6 36 10-53 178-213 (270)
43 PRK08660 L-fuculose phosphate 51.6 33 0.00071 28.7 5.0 35 9-52 115-149 (181)
44 PRK03634 rhamnulose-1-phosphat 51.6 28 0.00061 31.4 4.9 50 9-66 179-230 (274)
45 PRK06833 L-fuculose phosphate 49.8 21 0.00045 30.8 3.7 50 9-66 124-175 (214)
46 PF00596 Aldolase_II: Class II 49.5 14 0.0003 30.9 2.4 37 8-52 122-159 (184)
47 PRK08087 L-fuculose phosphate 48.3 37 0.0008 29.3 5.0 49 9-65 122-172 (215)
48 PRK06755 hypothetical protein; 45.2 33 0.00071 29.6 4.1 49 9-65 136-186 (209)
49 TIGR02409 carnitine_bodg gamma 43.7 33 0.00071 32.3 4.2 53 7-69 107-159 (366)
50 COG2140 Thermophilic glucose-6 43.1 50 0.0011 28.5 4.8 63 170-237 90-154 (209)
51 TIGR01086 fucA L-fuculose phos 42.1 30 0.00066 29.8 3.5 36 9-52 121-156 (214)
52 TIGR02410 carnitine_TMLD trime 39.6 47 0.001 31.2 4.6 52 9-69 100-151 (362)
53 PRK06357 hypothetical protein; 37.6 53 0.0012 28.4 4.3 37 9-53 130-172 (216)
54 TIGR03328 salvage_mtnB methylt 37.4 43 0.00093 28.3 3.6 24 30-53 138-164 (193)
55 PRK06557 L-ribulose-5-phosphat 37.3 40 0.00086 29.2 3.5 50 9-66 130-183 (221)
56 PF06820 Phage_fiber_C: Putati 36.0 38 0.00083 22.7 2.3 37 186-222 15-61 (64)
57 cd00379 Ribosomal_L10_P0 Ribos 35.0 97 0.0021 24.8 5.3 40 27-66 2-42 (155)
58 PF12791 RsgI_N: Anti-sigma fa 34.8 27 0.00058 23.0 1.6 27 211-240 10-36 (56)
59 COG3128 PiuC Uncharacterized i 34.7 2.9E+02 0.0063 23.6 7.9 21 247-267 160-180 (229)
60 PRK06754 mtnB methylthioribulo 33.8 44 0.00094 28.7 3.1 24 29-52 148-172 (208)
61 cd00398 Aldolase_II Class II A 33.7 35 0.00076 29.2 2.5 40 8-53 121-160 (209)
62 cd05797 Ribosomal_L10 Ribosoma 32.4 1.6E+02 0.0034 23.8 6.1 40 27-66 4-44 (157)
63 PF03668 ATP_bind_2: P-loop AT 31.6 75 0.0016 28.8 4.3 31 34-66 16-46 (284)
64 cd00491 4Oxalocrotonate_Tautom 31.5 66 0.0014 20.8 3.1 29 11-41 1-29 (58)
65 PRK06661 hypothetical protein; 31.4 61 0.0013 28.4 3.7 36 30-65 138-175 (231)
66 PRK02289 4-oxalocrotonate taut 29.9 78 0.0017 21.0 3.3 29 11-41 2-30 (60)
67 PLN02433 uroporphyrinogen deca 29.6 1.3E+02 0.0029 27.9 5.9 47 22-68 288-338 (345)
68 PRK00099 rplJ 50S ribosomal pr 29.4 1.9E+02 0.0041 23.9 6.2 40 27-66 5-45 (172)
69 PLN00052 prolyl 4-hydroxylase; 28.9 2.9E+02 0.0064 25.4 7.8 47 219-269 206-253 (310)
70 PF11142 DUF2917: Protein of u 27.6 37 0.00081 23.2 1.3 36 207-242 16-52 (63)
71 PRK00819 RNA 2'-phosphotransfe 27.4 24 0.00052 29.7 0.4 52 206-270 23-78 (179)
72 PF11243 DUF3045: Protein of u 26.9 54 0.0012 23.5 2.0 21 33-53 36-56 (89)
73 PF08823 PG_binding_2: Putativ 26.6 99 0.0021 21.9 3.4 34 29-62 15-48 (74)
74 PRK09553 tauD taurine dioxygen 26.4 1.6E+02 0.0034 26.4 5.5 38 30-70 28-65 (277)
75 PRK00115 hemE uroporphyrinogen 26.1 1.7E+02 0.0036 27.2 5.8 45 23-67 296-344 (346)
76 PF01361 Tautomerase: Tautomer 24.5 79 0.0017 20.8 2.5 29 11-41 1-29 (60)
77 PF01471 PG_binding_1: Putativ 24.4 89 0.0019 20.2 2.7 42 30-71 3-44 (57)
78 PRK02220 4-oxalocrotonate taut 24.0 1.1E+02 0.0025 20.0 3.2 29 11-41 2-30 (61)
79 KOG2107 Uncharacterized conser 23.9 85 0.0018 26.0 2.9 39 205-255 102-140 (179)
80 PF01113 DapB_N: Dihydrodipico 23.8 1.3E+02 0.0029 23.2 4.1 37 30-66 78-115 (124)
81 cd05796 Ribosomal_P0_like Ribo 23.5 1.6E+02 0.0034 24.2 4.6 40 27-66 2-42 (163)
82 KOG0256 1-aminocyclopropane-1- 23.5 2.1E+02 0.0046 27.5 5.8 57 12-69 392-460 (471)
83 PRK05834 hypothetical protein; 23.4 1.2E+02 0.0025 25.8 3.9 36 30-65 136-175 (194)
84 TIGR00013 taut 4-oxalocrotonat 23.1 1.1E+02 0.0024 20.1 3.1 29 11-41 1-30 (63)
85 COG0244 RplJ Ribosomal protein 22.6 2.8E+02 0.0061 23.1 6.0 41 26-66 6-47 (175)
86 PF00466 Ribosomal_L10: Riboso 22.0 3.2E+02 0.007 19.9 6.3 42 26-67 4-46 (100)
87 cd05795 Ribosomal_P0_L10e Ribo 22.0 1.9E+02 0.0042 24.0 4.9 40 27-66 2-42 (175)
88 COG0289 DapB Dihydrodipicolina 21.7 2.3E+02 0.005 25.4 5.5 37 30-66 80-117 (266)
89 KOG2631 Class II aldolase/addu 21.6 2.4E+02 0.0052 24.4 5.3 60 8-76 155-222 (238)
90 PRK00745 4-oxalocrotonate taut 21.5 1.4E+02 0.0029 19.7 3.2 29 11-41 2-30 (62)
91 TIGR00568 alkb DNA alkylation 21.0 4.8E+02 0.01 21.6 8.4 58 172-235 97-162 (169)
92 COG3695 Predicted methylated D 20.6 65 0.0014 24.4 1.5 28 231-261 41-68 (103)
93 PRK08193 araD L-ribulose-5-pho 20.3 1.4E+02 0.0031 26.0 4.0 24 30-53 143-173 (231)
94 PRK09220 methylthioribulose-1- 20.2 1.1E+02 0.0023 26.2 3.0 38 29-66 145-187 (204)
95 PRK07044 aldolase II superfami 20.2 1.5E+02 0.0032 26.3 4.0 51 9-66 138-190 (252)
96 PF11848 DUF3368: Domain of un 20.1 1.8E+02 0.0038 18.5 3.4 28 31-64 20-47 (48)
No 1
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=1.8e-77 Score=557.70 Aligned_cols=294 Identities=24% Similarity=0.378 Sum_probs=262.3
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYRS 86 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~G 86 (316)
.+||||||+.+ .++++++|.+++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ..++|
T Consensus 39 ~~iPvIDls~~--~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 116 (361)
T PLN02276 39 LAVPLIDLGGF--LSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCG 116 (361)
T ss_pred CCCCeEEChhh--cCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccc
Confidence 57999999984 4556667888999999999999999999999999999999999999999999999998754 46789
Q ss_pred CCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc
Q 040085 87 YMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KL 160 (316)
Q Consensus 87 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~ 160 (316)
|.+... ..|++|.|.++.............+.+|.||+..++||+.+++|+..|.+++..||++|+++||++ ++
T Consensus 117 Y~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 196 (361)
T PLN02276 117 YASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGY 196 (361)
T ss_pred cCccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 977543 247999999875211111111223456789987889999999999999999999999999999999 89
Q ss_pred hhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHHHHh
Q 040085 161 YVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWS 240 (316)
Q Consensus 161 f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~T 240 (316)
|.+++..+.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+|++||
T Consensus 197 f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalVVNiGD~L~~~T 275 (361)
T PLN02276 197 YRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVF-VDNKWRSVRPRPGALVVNIGDTFMALS 275 (361)
T ss_pred HHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEE-ECCEEEEcCCCCCeEEEEcHHHHHHHh
Confidence 9888887789999999999988888899999999999999999999999997 799999999999999999999999999
Q ss_pred CCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 241 NGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 241 nG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
||+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|+||+||++.+.++
T Consensus 276 NG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~ 339 (361)
T PLN02276 276 NGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKH 339 (361)
T ss_pred CCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHh
Confidence 9999999999998888899999999999999999999999999999999999999999988877
No 2
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=1.3e-76 Score=545.53 Aligned_cols=295 Identities=22% Similarity=0.364 Sum_probs=261.2
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC--CCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS--KPY 84 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~ 84 (316)
..+||||||+.+ .+++++++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++... ..+
T Consensus 3 ~~~iPvIDl~~~--~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~ 80 (320)
T PTZ00273 3 RASLPVIDVSPL--FGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLH 80 (320)
T ss_pred CCCCCEEecHHh--cCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCC
Confidence 568999999984 4556667888999999999999999999999999999999999999999999999998643 367
Q ss_pred CCCCCCCC-------CCCcceeeecCCCCCCCCchh---hhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040085 85 RSYMGESP-------AVPLHQSFGIDNEPGIDVDTT---AQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFES 154 (316)
Q Consensus 85 ~GY~~~~~-------~~d~~E~~~~~~~~~~~~~~~---~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~ 154 (316)
+||.+.+. ..|++|+|.++...+...... .....+|.||+.+|+||+.+++|++.|.+++..|+++|+++
T Consensus 81 ~GY~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~ 160 (320)
T PTZ00273 81 RGYGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQVEGWMELMETHYRDMQALALVLLRALALA 160 (320)
T ss_pred CCCCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89987642 247899999875321111111 11235789999899999999999999999999999999999
Q ss_pred cCCC-cchhhhccCccceeeeccccCCCC-CCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEh
Q 040085 155 FGTG-KLYVPHIQGSITLFRLMKYKVPPN-NESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIV 232 (316)
Q Consensus 155 Lgl~-~~f~~~~~~~~~~lr~~~Yp~~~~-~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~ 232 (316)
||++ ++|.+.+..+.+.||++|||+++. ++..+|+++|||+|+||||+||.++||||++++|+|++|+|.||++|||+
T Consensus 161 Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p~pg~lvVNv 240 (320)
T PTZ00273 161 IGLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSGEWMDVPPLEGSFVVNI 240 (320)
T ss_pred hCcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCceEEECCCCCEEeCCCCCCeEEEEH
Confidence 9999 889888877788999999999876 35678999999999999999999999999988999999999999999999
Q ss_pred hHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 233 GDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 233 Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
||+||+||||+||||+|||+.+ ..+||||+||++|+.|++|.|+++++++++|++|+|+|++||+..++++
T Consensus 241 GD~l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~ 311 (320)
T PTZ00273 241 GDMMEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAE 311 (320)
T ss_pred HHHHHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHHH
Confidence 9999999999999999999865 4689999999999999999999999999999999999999999998876
No 3
>PLN02216 protein SRG1
Probab=100.00 E-value=1.4e-76 Score=550.54 Aligned_cols=294 Identities=22% Similarity=0.320 Sum_probs=258.3
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYRS 86 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~G 86 (316)
.+||+|||+.+ .+++ .+.+++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ..++|
T Consensus 51 ~~iPvIDls~~--~~~~--~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 126 (357)
T PLN02216 51 SEIPIIDMKRL--CSST--AMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEG 126 (357)
T ss_pred CCCCeEEChhc--cCCc--cHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccc
Confidence 47999999984 3333 2346899999999999999999999999999999999999999999999999754 35788
Q ss_pred CCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc
Q 040085 87 YMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KL 160 (316)
Q Consensus 87 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~ 160 (316)
|..... ..|++|.|.+... + .....+|.||+.++.||+.+++|++.|.+|+.+||++|+++||++ ++
T Consensus 127 y~~~~~~~~~~~~d~~e~~~~~~~--p-----~~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 199 (357)
T PLN02216 127 FGQAFVVSEDQKLDWADMFFLTMQ--P-----VRLRKPHLFPKLPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEE 199 (357)
T ss_pred cCccccccccccCCceeeeeeecc--C-----cccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 854321 2478888877541 1 112457889998899999999999999999999999999999999 88
Q ss_pred hhhhccC-ccceeeeccccCCCCCCCCcccccccCCCceeEEee-CCCCceEEEecCCceEeccCCCCcEEEEhhHHHHH
Q 040085 161 YVPHIQG-SITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCE-NNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKA 238 (316)
Q Consensus 161 f~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q-d~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~ 238 (316)
|.+++.. ..+.||++|||||+.++..+|+++|||+|+||||+| ++++||||+ ++|+|++|+|+||++|||+||+||+
T Consensus 200 f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~L~~ 278 (357)
T PLN02216 200 MEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIK-KDGKWVSVKPLPNALVVNVGDILEI 278 (357)
T ss_pred HHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEE-ECCEEEECCCCCCeEEEEcchhhHh
Confidence 9887765 457899999999998888899999999999999999 569999996 7999999999999999999999999
Q ss_pred HhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc--ccccchhhc
Q 040085 239 WSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN--ISDDALEIY 313 (316)
Q Consensus 239 ~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~--~~~~~~~~~ 313 (316)
||||+|||++|||+.++.++||||+||++|+.|++|.|+++++++++|++|+++||+||++.++++ .-+..|+.|
T Consensus 279 ~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~ 355 (357)
T PLN02216 279 ITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAM 355 (357)
T ss_pred hcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcchhhhh
Confidence 999999999999998888899999999999999999999999999999999999999999999987 345555544
No 4
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=7.6e-76 Score=541.36 Aligned_cols=289 Identities=22% Similarity=0.348 Sum_probs=252.5
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRS 86 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~G 86 (316)
..+||+|||+.. .+..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.....++|
T Consensus 12 ~~~iP~IDl~~~--------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~G 83 (332)
T PLN03002 12 VSSLNCIDLAND--------DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRG 83 (332)
T ss_pred CCCCCEEeCCch--------hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCC
Confidence 558999999851 245689999999999999999999999999999999999999999999999976666899
Q ss_pred CCCCCCC---------CCcceeeecCCCCCCCCchh-hhhccCCCCCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040085 87 YMGESPA---------VPLHQSFGIDNEPGIDVDTT-AQAFTNLMWPQG--NPSFCETLKSVTSKMLELNYTILKMVFES 154 (316)
Q Consensus 87 Y~~~~~~---------~d~~E~~~~~~~~~~~~~~~-~~~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~l~~~ 154 (316)
|.+.+.+ .|++|.|.++.+.+.+.... ...+.+|.||+. .|+||+.+++|+++|.+|+..||++|+++
T Consensus 84 Y~~~~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~ 163 (332)
T PLN03002 84 YTPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALA 163 (332)
T ss_pred cCcccccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9865321 48999998875322221111 122457899984 68999999999999999999999999999
Q ss_pred cCCC-cchhh--hccCccceeeeccccCCCCCC-CCcccccccCCCceeEEeeCCCCceEEEec----CCceEeccCCCC
Q 040085 155 FGTG-KLYVP--HIQGSITLFRLMKYKVPPNNE-SAVGLIPHTDKNVLSILCENNVQGLEILNK----DGVYVPVGVPDN 226 (316)
Q Consensus 155 Lgl~-~~f~~--~~~~~~~~lr~~~Yp~~~~~~-~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~----~g~W~~V~p~~g 226 (316)
||++ ++|.+ .+..+.+.||++|||+++.++ ..+|+++|||+|+||||+||+++||||+.. +|+|++|+|.||
T Consensus 164 Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg 243 (332)
T PLN03002 164 LDLDVGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKG 243 (332)
T ss_pred cCCChHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCC
Confidence 9999 88875 455567899999999987654 478999999999999999999999999754 478999999999
Q ss_pred cEEEEhhHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 227 ASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 227 ~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
++|||+||+|++||||+||||+|||+.++ .+||||+||++|+.|++|.|+++++++++|.+|+|+|++||++.+++.
T Consensus 244 ~~VVNiGD~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~ 320 (332)
T PLN03002 244 AFIVNLGDMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEE 320 (332)
T ss_pred eEEEEHHHHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999775 579999999999999999999999999999999999999999999887
No 5
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=4.6e-76 Score=546.31 Aligned_cols=278 Identities=29% Similarity=0.448 Sum_probs=249.0
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYRS 86 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~G 86 (316)
.+||||||+.. .++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..++|
T Consensus 55 ~~iPvIDl~~~-----------~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~G 123 (358)
T PLN02254 55 ESIPVIDLSDP-----------NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSG 123 (358)
T ss_pred CCCCeEeCCCH-----------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccc
Confidence 57999999751 4689999999999999999999999999999999999999999999998754 35678
Q ss_pred CCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc
Q 040085 87 YMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KL 160 (316)
Q Consensus 87 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~ 160 (316)
|..... ..+|+|.|.+... +. ...+|.||+.+++||+.+++|+++|.+|+..||++|+++||++ ++
T Consensus 124 y~~~~~~~~~~~~~w~e~~~~~~~--p~------~~~~~~wP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~ 195 (358)
T PLN02254 124 YGVARISSFFNKKMWSEGFTIMGS--PL------EHARQLWPQDHTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEED 195 (358)
T ss_pred ccccccccccCCCCceeeEEeecC--cc------ccchhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 865332 2468899887531 11 1235789999999999999999999999999999999999999 78
Q ss_pred hhhhc-----cCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHH
Q 040085 161 YVPHI-----QGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 161 f~~~~-----~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
|...+ ..+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+..+|+|++|+|.||++|||+||+
T Consensus 196 ~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~ 275 (358)
T PLN02254 196 IKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQSNTSGLQVFREGVGWVTVPPVPGSLVVNVGDL 275 (358)
T ss_pred HHHHhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEecCCCCCceEECCCCEEEEcccCCCCEEEEhHHH
Confidence 86554 4566899999999999888889999999999999999999999999866668999999999999999999
Q ss_pred HHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 236 LKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 236 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
||+||||+|||++|||+.++..+||||+||++|+.|++|.|+++++++++|++|+++|++||++.+++.
T Consensus 276 lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~ 344 (358)
T PLN02254 276 LHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKH 344 (358)
T ss_pred HHHHhCCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHh
Confidence 999999999999999999888899999999999999999999999999999999999999999998877
No 6
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=6.6e-76 Score=546.69 Aligned_cols=288 Identities=29% Similarity=0.439 Sum_probs=258.1
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYR 85 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~ 85 (316)
..+||||||+.+ ..++.+++.+++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ..++
T Consensus 50 ~~~IPvIDl~~l--~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~ 127 (361)
T PLN02758 50 PDDIPVIDFSRL--VKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQ 127 (361)
T ss_pred CCCCCeEEchhh--cCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCcc
Confidence 457999999984 4445556778899999999999999999999999999999999999999999999998754 4678
Q ss_pred CCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-c
Q 040085 86 SYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-K 159 (316)
Q Consensus 86 GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 159 (316)
||..... ..||+|.|.++.. +. ....+|.||+.++.||+.+++|+++|.+|+..|+++|+++||++ +
T Consensus 128 GY~~~~~~~~~~~~d~~e~~~~~~~--p~-----~~~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 200 (361)
T PLN02758 128 GYGQAFVFSEDQKLDWCNMFALGVE--PH-----FIRNPKLWPTKPARFSETLEVYSREIRELCQRLLKYIAMTLGLKED 200 (361)
T ss_pred ccCcccccccccccCeeEEEEeecc--Cc-----cccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChh
Confidence 9965321 2468888877642 11 11246899998899999999999999999999999999999999 8
Q ss_pred chhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCC--CCceEEEecCCceEeccCCCCcEEEEhhHHHH
Q 040085 160 LYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENN--VQGLEILNKDGVYVPVGVPDNASVVIVGDTLK 237 (316)
Q Consensus 160 ~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~--~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~ 237 (316)
+|.+.+....+.||++|||+|+.++..+|+++|||+|+||||+||+ ++||||+ ++|+|++|+|.||++|||+||+||
T Consensus 201 ~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~-~~g~Wi~V~p~pgalVVNiGD~L~ 279 (361)
T PLN02758 201 RFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQIL-KDNTWVPVHPVPNALVINIGDTLE 279 (361)
T ss_pred hhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCCCeeee-eCCEEEeCCCCCCeEEEEccchhh
Confidence 9988887778899999999998888889999999999999999984 8899996 579999999999999999999999
Q ss_pred HHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 238 AWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 238 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
+||||+|||++|||+.++.++|||++||++|+.|++|.|+++++++++|++|++++|+||+..++++
T Consensus 280 ~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~ 346 (361)
T PLN02758 280 VLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTS 346 (361)
T ss_pred hhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhc
Confidence 9999999999999998878899999999999999999999999999999999999999999999987
No 7
>PLN02997 flavonol synthase
Probab=100.00 E-value=1e-75 Score=537.73 Aligned_cols=282 Identities=23% Similarity=0.384 Sum_probs=250.1
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRS 86 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~G 86 (316)
..+||||||+.. ++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.....++|
T Consensus 30 ~~~IPvIDls~~--------~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~G 101 (325)
T PLN02997 30 AVDVPVVDLSVS--------DEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEG 101 (325)
T ss_pred CCCCCeEECCCC--------CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccc
Confidence 347999999873 135789999999999999999999999999999999999999999999999976666899
Q ss_pred CCCCCC--CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchhh
Q 040085 87 YMGESP--AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KLYVP 163 (316)
Q Consensus 87 Y~~~~~--~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~f~~ 163 (316)
|..... ..+++|.+..... +.. ....|.||+.+|+||+++++|++.|.+|+..|+++|+++||++ ++|.+
T Consensus 102 Y~~~~~~~~~d~~e~~~~~~~--p~~-----~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~ 174 (325)
T PLN02997 102 YKRNYLGGINNWDEHLFHRLS--PPS-----IINYKYWPKNPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQ 174 (325)
T ss_pred cCcccccCCCCccceeEeeec--Ccc-----ccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 976532 2357776543211 111 1134789998999999999999999999999999999999999 88987
Q ss_pred hccC--ccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHHHHhC
Q 040085 164 HIQG--SITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSN 241 (316)
Q Consensus 164 ~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~Tn 241 (316)
.+.. ..+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+|||
T Consensus 175 ~~~~~~~~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~Le~~TN 253 (325)
T PLN02997 175 SIGGETAEYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVPGLQAF-KDEQWLDLNYINSAVVVIIGDQLMRMTN 253 (325)
T ss_pred HhcCCcccceeeeecCCCCCCcccccCccCccCCCceEEEecCCCCCEEEe-ECCcEEECCCCCCeEEEEechHHHHHhC
Confidence 7653 245899999999988778899999999999999999999999997 6899999999999999999999999999
Q ss_pred CCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 242 GRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 242 G~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
|+||||+|||+.++..+|||++||++|+.|++|.|+++++++++|++|+|++++||++.+++.
T Consensus 254 G~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 254 GRFKNVLHRAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIRG 316 (325)
T ss_pred CccccccceeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhh
Confidence 999999999998877889999999999999999999999999999999999999999999887
No 8
>PLN02485 oxidoreductase
Probab=100.00 E-value=1.5e-75 Score=540.08 Aligned_cols=298 Identities=21% Similarity=0.285 Sum_probs=255.8
Q ss_pred CCCCCceeeCCCCCCCC-C-----CHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhc
Q 040085 6 VQDEIPFLDFSGEVLDD-F-----TDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYA 79 (316)
Q Consensus 6 ~~~~iPvIDl~~~~l~~-~-----~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~ 79 (316)
.+..||||||+.+ +.. + ++.++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.
T Consensus 4 ~~~~iPvIDl~~l-~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~ 82 (329)
T PLN02485 4 DFKSIPVIDISPL-VAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIK 82 (329)
T ss_pred CCCCCCeEechhh-hccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhc
Confidence 3678999999985 221 1 12256789999999999999999999999999999999999999999999999986
Q ss_pred CC--CCCCCCCCCCC-----CCCcceeeecCCCCCCCCch--hhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 040085 80 SS--KPYRSYMGESP-----AVPLHQSFGIDNEPGIDVDT--TAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKM 150 (316)
Q Consensus 80 ~~--~~~~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~--~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ 150 (316)
.. ..++||.+.+. ..|++|.|.+..+..+.... ......+|.||+.+++||+.+++|++.|.+++..|+++
T Consensus 83 ~~~~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ 162 (329)
T PLN02485 83 MTPAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRG 162 (329)
T ss_pred ccCCCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 35789987543 24788988876532111111 01123578999989999999999999999999999999
Q ss_pred HHHhcCCC-cchhhh-ccCccceeeeccccCCCC----CCCCcccccccCCCceeEEeeC-CCCceEEEecCCceEeccC
Q 040085 151 VFESFGTG-KLYVPH-IQGSITLFRLMKYKVPPN----NESAVGLIPHTDKNVLSILCEN-NVQGLEILNKDGVYVPVGV 223 (316)
Q Consensus 151 l~~~Lgl~-~~f~~~-~~~~~~~lr~~~Yp~~~~----~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p 223 (316)
|+++||++ ++|.+. ...+.+.||++|||+++. ++..+|+++|||+|+||||+|| +++||||++++|+|++|+|
T Consensus 163 ~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p 242 (329)
T PLN02485 163 IALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIP 242 (329)
T ss_pred HHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCC
Confidence 99999999 888654 445667899999999875 4567999999999999999997 4899999988999999999
Q ss_pred CCCcEEEEhhHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCC--CCCCCCCCCcCHHHHHHHH
Q 040085 224 PDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVD--DDHPLVYRPFKFSEFMAYF 301 (316)
Q Consensus 224 ~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~--~~~~~~y~~~t~~e~~~~~ 301 (316)
.||++|||+||+|++||||+||||+|||+.++..+||||+||++|+.|++|.|++++++ .++|++|+|+||+||+..+
T Consensus 243 ~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~ 322 (329)
T PLN02485 243 IPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNK 322 (329)
T ss_pred CCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHHH
Confidence 99999999999999999999999999999887789999999999999999999999987 6778999999999999999
Q ss_pred Hhc
Q 040085 302 VNN 304 (316)
Q Consensus 302 ~~~ 304 (316)
+++
T Consensus 323 ~~~ 325 (329)
T PLN02485 323 VLT 325 (329)
T ss_pred HHH
Confidence 876
No 9
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=2.5e-75 Score=541.39 Aligned_cols=286 Identities=22% Similarity=0.369 Sum_probs=251.7
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYRS 86 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~G 86 (316)
.+||||||+.+ ..+++ +|.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+|
T Consensus 36 ~~iPvIDls~~--~~~~~-~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 112 (358)
T PLN02515 36 DEIPVISLAGI--DEVGG-RRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGG 112 (358)
T ss_pred CCCCEEEChhc--cCCch-HHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCCCccC
Confidence 46999999984 43443 6788999999999999999999999999999999999999999999999998654 34579
Q ss_pred CCCCC-----CCCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc
Q 040085 87 YMGES-----PAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KL 160 (316)
Q Consensus 87 Y~~~~-----~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~ 160 (316)
|.... ...|++|.|.+... +. .....|.||+.+++||+.+++|++.|.+|+..|+++|+++||++ ++
T Consensus 113 y~~~~~~~~~~~~d~kE~~~~~~~--~~-----~~~~~n~WP~~~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lgl~~~~ 185 (358)
T PLN02515 113 FIVSSHLQGEAVQDWREIVTYFSY--PV-----RTRDYSRWPDKPEGWRAVTEEYSEKLMGLACKLLEVLSEAMGLEKEA 185 (358)
T ss_pred cccccccccccccCceeeeccccC--cc-----cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 95322 12478898866421 11 01124789998899999999999999999999999999999999 88
Q ss_pred hhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCC-ceEeccCCCCcEEEEhhHHHHHH
Q 040085 161 YVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDG-VYVPVGVPDNASVVIVGDTLKAW 239 (316)
Q Consensus 161 f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g-~W~~V~p~~g~~vVn~Gd~l~~~ 239 (316)
|.+.+....+.+|++|||+++.++..+|+++|||+|+||||+||+++||||+.++| +|++|+|.||++|||+||+||+|
T Consensus 186 f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~ 265 (358)
T PLN02515 186 LTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYL 265 (358)
T ss_pred HHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECCCCeEEECCCCCCeEEEEccHHHHHH
Confidence 98877777788999999999887888999999999999999999999999987655 79999999999999999999999
Q ss_pred hCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 240 SNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 240 TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
|||+||||+|||+.++..+||||+||++|+.|++|.|++ ++.+++|++|+++||+||++.++.+
T Consensus 266 TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~~eyl~~~~~~ 329 (358)
T PLN02515 266 SNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKPILEEPITFAEMYRRKMSR 329 (358)
T ss_pred hCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCHHHHHHHHHhc
Confidence 999999999999988778999999999999999999997 6677789999999999999999877
No 10
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.3e-75 Score=541.21 Aligned_cols=293 Identities=24% Similarity=0.410 Sum_probs=256.3
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYR 85 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~ 85 (316)
..+||+|||+.+ . +. ++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+
T Consensus 24 ~~~iPvIDls~~--~--~~-~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~ 98 (345)
T PLN02750 24 DEEIPVIDLSVS--T--SH-DKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPM 98 (345)
T ss_pred CCCCCeEECCCC--C--cc-cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcc
Confidence 357999999973 2 22 4678899999999999999999999999999999999999999999999998654 2457
Q ss_pred CCCCCCC---CCCcceeeecCCCCCCC-----Cchh-hhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 040085 86 SYMGESP---AVPLHQSFGIDNEPGID-----VDTT-AQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFG 156 (316)
Q Consensus 86 GY~~~~~---~~d~~E~~~~~~~~~~~-----~~~~-~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lg 156 (316)
||.+... ..|++|.|.+....... .... .....+|.||+.+++||+++++|++.|.+|+..|+++|+++||
T Consensus 99 GY~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 178 (345)
T PLN02750 99 GYHDSEHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYARQVEKLAFKLLELISLSLG 178 (345)
T ss_pred CcCcccccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9964321 24899999886421100 0000 0011268999988999999999999999999999999999999
Q ss_pred CC-cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEe-cCCceEeccCCCCcEEEEhhH
Q 040085 157 TG-KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILN-KDGVYVPVGVPDNASVVIVGD 234 (316)
Q Consensus 157 l~-~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~-~~g~W~~V~p~~g~~vVn~Gd 234 (316)
++ ++|.+++..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||+. ++|+|++|+|.||++|||+||
T Consensus 179 l~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~g~Wi~V~p~pg~~vVNiGD 258 (345)
T PLN02750 179 LPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGLQISRRSDGEWIPVKPIPDAFIINIGN 258 (345)
T ss_pred CCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCceEEeecCCCeEEEccCCCCeEEEEhHH
Confidence 99 8998888888899999999999877778999999999999999999999999975 689999999999999999999
Q ss_pred HHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 235 TLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 235 ~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
+|++||||+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|+|++||+..++..
T Consensus 259 ~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~~~~~ 328 (345)
T PLN02750 259 CMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKFFASRNRS 328 (345)
T ss_pred HHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHHHHHHHhc
Confidence 9999999999999999998888899999999999999999999999999999999999999999988877
No 11
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=8.4e-75 Score=539.91 Aligned_cols=288 Identities=25% Similarity=0.393 Sum_probs=254.6
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYR 85 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~ 85 (316)
.++||+|||+.+ .++++++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++
T Consensus 49 ~~~iPvIDls~l--~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~ 126 (362)
T PLN02393 49 EINIPVIDLSSL--FSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYE 126 (362)
T ss_pred CCCCCeEECccc--cCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCccc
Confidence 468999999984 4556657889999999999999999999999999999999999999999999999999754 3578
Q ss_pred CCC-CCCC----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-c
Q 040085 86 SYM-GESP----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-K 159 (316)
Q Consensus 86 GY~-~~~~----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 159 (316)
||. ..+. ..+++|.+.+... +. ....+|.||+.+++||+.+++|+++|.+++..||++|+++||++ +
T Consensus 127 Gy~~~~~~~~~~~~d~~e~~~~~~~--~~-----~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~ 199 (362)
T PLN02393 127 GYGSRLGVEKGAILDWSDYYFLHYL--PS-----SLKDPNKWPSLPPSCRELIEEYGEEVVKLCGRLMKVLSVNLGLEED 199 (362)
T ss_pred ccccccccccccccCchhheeeeec--Cc-----cccchhhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 994 3221 2467777765431 11 12236789998899999999999999999999999999999999 8
Q ss_pred chhhhccCc---cceeeeccccCCCCCCCCcccccccCCCceeEEeeC-CCCceEEEecCCceEeccCCCCcEEEEhhHH
Q 040085 160 LYVPHIQGS---ITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCEN-NVQGLEILNKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 160 ~f~~~~~~~---~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
+|.+.+... .+.||++|||+++.++..+|+++|||+|+||||+|+ +++||||+ ++|+|++|+|.||++|||+||+
T Consensus 200 ~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~-~~g~W~~V~p~pgalVVNiGD~ 278 (362)
T PLN02393 200 RLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVAGLQVR-RDDAWITVKPVPDAFIVNIGDQ 278 (362)
T ss_pred HHHHHhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCCCCcceee-ECCEEEECCCCCCeEEEEcchh
Confidence 898776542 378999999999887788999999999999999984 68999998 7899999999999999999999
Q ss_pred HHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 236 LKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 236 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
|++||||+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|+|++||+..+.++
T Consensus 279 l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~ 347 (362)
T PLN02393 279 IQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTK 347 (362)
T ss_pred hHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCCCCCccHHHHHHHHHhc
Confidence 999999999999999998888899999999999999999999999999999999999999999888866
No 12
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=2.1e-74 Score=525.15 Aligned_cols=290 Identities=29% Similarity=0.478 Sum_probs=250.6
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRS 86 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~G 86 (316)
..+||||||+.+ . +.+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++......+|
T Consensus 3 ~~~iPvIDls~~--~--------~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~G 72 (300)
T PLN02365 3 EVNIPTIDLEEF--P--------GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSG 72 (300)
T ss_pred cCCCCEEEChhh--H--------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCC
Confidence 345999999973 1 235899999999999999999999999999999999999999999999765455689
Q ss_pred CCCCCCCCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C-cchhhh
Q 040085 87 YMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGT-G-KLYVPH 164 (316)
Q Consensus 87 Y~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl-~-~~f~~~ 164 (316)
|.+.+...+++|.+.+... ........ .++.| ..+|+||+.+++|++.|.+|+..|+++|+++||+ + ++|++.
T Consensus 73 Y~~~~~~~~~~e~~~~~~~---~~~~~~~~-~~~~~-~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~ 147 (300)
T PLN02365 73 YMAPSEVNPLYEALGLYDM---ASPQAVDT-FCSQL-DASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGW 147 (300)
T ss_pred CCCcCCCCCchhheecccc---cCchhhhh-ccccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhc
Confidence 9887766678898877641 11111111 12223 3468999999999999999999999999999999 7 777663
Q ss_pred ccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCC-CCceEEEec-CCceEeccCCCCcEEEEhhHHHHHHhCC
Q 040085 165 IQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENN-VQGLEILNK-DGVYVPVGVPDNASVVIVGDTLKAWSNG 242 (316)
Q Consensus 165 ~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~-~~GLqv~~~-~g~W~~V~p~~g~~vVn~Gd~l~~~TnG 242 (316)
.+.||++|||+++.++...|+++|||+|+||||+||+ ++||||+++ +|+|++|+|.||++|||+||+||+||||
T Consensus 148 ----~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG 223 (300)
T PLN02365 148 ----PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNG 223 (300)
T ss_pred ----ccceeeeecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCC
Confidence 4689999999998877889999999999999999984 999999877 7999999999999999999999999999
Q ss_pred CCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc--ccccchhhccc
Q 040085 243 RLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN--ISDDALEIYAG 315 (316)
Q Consensus 243 ~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~--~~~~~~~~~~~ 315 (316)
+||||+|||+.++..+||||+||+.|+.|++|.|+++++++++|++|++++++||+..++.+ .-...+++|++
T Consensus 224 ~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 298 (300)
T PLN02365 224 RLCNVKHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALALITA 298 (300)
T ss_pred ceecccceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchHhhhhc
Confidence 99999999998877899999999999999999999999999999999999999999999888 35666777754
No 13
>PLN02904 oxidoreductase
Probab=100.00 E-value=1.5e-74 Score=536.43 Aligned_cols=284 Identities=25% Similarity=0.362 Sum_probs=247.1
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC--CCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSK--PYR 85 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~ 85 (316)
.+||+|||+.+ .+ ++.|..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ...
T Consensus 50 ~~iPvIDls~~--~~--~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~ 125 (357)
T PLN02904 50 ITLPVIDLSLL--HD--PLLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPV 125 (357)
T ss_pred CCCCEEECccc--CC--chhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCcc
Confidence 57999999984 32 2367789999999999999999999999999999999999999999999999986432 223
Q ss_pred CCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-c
Q 040085 86 SYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-K 159 (316)
Q Consensus 86 GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 159 (316)
||..... ..+|++.+..... +. ....|.||+.+|+||+.+++|+++|.+|+..|+++||++||++ +
T Consensus 126 ~~g~~~~~~~~~~~~~~d~~~~~~~--p~------~~~~n~WP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 197 (357)
T PLN02904 126 RYGTSLNHSTDRVHYWRDFIKHYSH--PL------SKWINLWPSNPPCYKEKVGKYAEATHVLHKQLIEAISESLGLEKN 197 (357)
T ss_pred cccccccccCCCCCCceEEeeeccC--Cc------ccccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 4432111 1123433322210 10 1125789998899999999999999999999999999999999 8
Q ss_pred chhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHHHH
Q 040085 160 LYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAW 239 (316)
Q Consensus 160 ~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~ 239 (316)
+|.+.+....+.||++|||||+.++..+|+++|||+|+||||+|+ .+||||+.++|+|++|+|.||++|||+||+||+|
T Consensus 198 ~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd-~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~ 276 (357)
T PLN02904 198 YLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS-SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVM 276 (357)
T ss_pred HHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEecC-CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHH
Confidence 898888777789999999999888788999999999999999997 5999999889999999999999999999999999
Q ss_pred hCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 240 SNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 240 TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
|||+||||+|||+.++..+||||+||+.|+.|++|.|+++++++++|++|+|+||+||+..++++
T Consensus 277 TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~~ 341 (357)
T PLN02904 277 SNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFSFNDFLDYISSN 341 (357)
T ss_pred hCCeeeccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHHHHHHHHHhc
Confidence 99999999999998888899999999999999999999999999999999999999999999988
No 14
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=8.4e-75 Score=539.90 Aligned_cols=288 Identities=24% Similarity=0.351 Sum_probs=252.0
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC---CC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS---KP 83 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~---~~ 83 (316)
..+||||||+.+ .++++++|..++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..
T Consensus 45 ~~~iPvIDls~~--~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~ 122 (360)
T PLN03178 45 GPQVPVVDLSNI--ESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGA 122 (360)
T ss_pred CCCCCEEEchhh--cCCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCC
Confidence 457999999984 4555557889999999999999999999999999999999999999999999999999754 24
Q ss_pred CCCCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 040085 84 YRSYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG 158 (316)
Q Consensus 84 ~~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 158 (316)
++||..... ..+++|.+.... . +.. ...+|.||+.+|+||+.+++|++.|.+++..||++|+++||++
T Consensus 123 ~~Gy~~~~~~~~~~~~d~~e~~~~~~-~-p~~-----~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 195 (360)
T PLN03178 123 AQGYGSKLAANASGQLEWEDYFFHLT-L-PED-----KRDPSLWPKTPPDYVPATSEYSRSLRSLATKLLAILSLGLGLP 195 (360)
T ss_pred ccccccccccccccccchhHhhcccc-C-Ccc-----ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 789954321 124555543321 0 111 1236799999999999999999999999999999999999999
Q ss_pred -cchhhhcc---CccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhH
Q 040085 159 -KLYVPHIQ---GSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGD 234 (316)
Q Consensus 159 -~~f~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd 234 (316)
++|.+.+. ...+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||
T Consensus 196 ~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p~pg~lvVNiGD 274 (360)
T PLN03178 196 EDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILHNMVPGLQVL-YEGKWVTAKCVPDSIVVHIGD 274 (360)
T ss_pred HHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEeeCCCCceeEe-ECCEEEEcCCCCCeEEEEccH
Confidence 88988776 3457899999999988888899999999999999999999999997 589999999999999999999
Q ss_pred HHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCe-eeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 235 TLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVA-TEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 235 ~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~-i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
+||+||||+||||+|||+.++..+||||+||++|+.|+. +.|+++++++++|++|+|+|++||++.++.+
T Consensus 275 ~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~~ 345 (360)
T PLN03178 275 TLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFK 345 (360)
T ss_pred HHHHHhCCccccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCcccCCCccHHHHHHHHHhc
Confidence 999999999999999999887788999999999999875 5999999999999999999999999998887
No 15
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.3e-74 Score=535.46 Aligned_cols=284 Identities=24% Similarity=0.367 Sum_probs=247.7
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC---CC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS---KP 83 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~---~~ 83 (316)
..+||+|||+.+ .+. ++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..
T Consensus 39 ~~~iPvIDls~~--~~~---~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~ 113 (348)
T PLN02912 39 GDSIPLIDLRDL--HGP---NRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKT 113 (348)
T ss_pred CCCCCeEECccc--CCc---CHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCc
Confidence 357999999984 322 3567899999999999999999999999999999999999999999999996432 22
Q ss_pred CCCCCCCC----CCCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 040085 84 YRSYMGES----PAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG- 158 (316)
Q Consensus 84 ~~GY~~~~----~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~- 158 (316)
.+||.... ...+++|.+.+... +. ...+|.||+.+++||+.+++|++.|.+|+..|+++|+++||++
T Consensus 114 ~~~~~~~~~~~~~~~~~~e~~~~~~~--~~------~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~il~~la~~Lgl~~ 185 (348)
T PLN02912 114 TRLSTSFNVSKEKVSNWRDFLRLHCY--PI------EDFIEEWPSTPISFREVTAEYATSVRALVLTLLEAISESLGLEK 185 (348)
T ss_pred ccccccccccccccCCchheEEEeec--Cc------ccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 34443321 12356666655421 11 0125789999999999999999999999999999999999999
Q ss_pred cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHHH
Q 040085 159 KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKA 238 (316)
Q Consensus 159 ~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~ 238 (316)
++|.+++....+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+|++
T Consensus 186 ~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~L~~ 264 (348)
T PLN02912 186 DRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVF-KDGKWIAVNPIPNTFIVNLGDQMQV 264 (348)
T ss_pred HHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCceEEE-ECCcEEECCCcCCeEEEEcCHHHHH
Confidence 889888877788999999999988777899999999999999999999999997 7899999999999999999999999
Q ss_pred HhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCC--CCCCCCCcCHHHHHHHHHhc
Q 040085 239 WSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDD--HPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 239 ~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~--~~~~y~~~t~~e~~~~~~~~ 304 (316)
||||+||||+|||+.++..+||||+||++|+.|+.|.|++++++++ +|++|+|+||+||+..++++
T Consensus 265 ~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~ 332 (348)
T PLN02912 265 ISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDT 332 (348)
T ss_pred HhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHHHHhc
Confidence 9999999999999988788999999999999999999999999875 48999999999999999887
No 16
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=2.2e-74 Score=504.88 Aligned_cols=295 Identities=22% Similarity=0.354 Sum_probs=259.5
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC--CC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSK--PY 84 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~ 84 (316)
...||+|||+.+ ...++.+|..++++|++||+++|||||+||||+.++++++++++++||+||.|+|.++.... .+
T Consensus 3 ~~~lp~idls~~--~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~ 80 (322)
T COG3491 3 TRDLPIIDLSEL--AGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQH 80 (322)
T ss_pred CCcCceeccHHh--cCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCccc
Confidence 568999999984 44555689999999999999999999999999999999999999999999999999998653 68
Q ss_pred CCCCCCCCC-----CCcceeeecCCCCCC---CCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 040085 85 RSYMGESPA-----VPLHQSFGIDNEPGI---DVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFG 156 (316)
Q Consensus 85 ~GY~~~~~~-----~d~~E~~~~~~~~~~---~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lg 156 (316)
+||.+.+.+ .|++|.++++.+... ..........+|+|| ..|+||+.+..|++.|.+++.+||++||.+|+
T Consensus 81 rGY~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP-~ip~~r~~ll~~~~~~~~~~~rLL~aiA~~Ld 159 (322)
T COG3491 81 RGYTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP-AIPGLRDALLQYYRAMTAVGLRLLRAIALGLD 159 (322)
T ss_pred cccccCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999987643 489999999875431 122223456799999 89999999999999999999999999999999
Q ss_pred CC-cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHH
Q 040085 157 TG-KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 157 l~-~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
|+ +.|++.++++.+.||+++||+.+..+..-+.++|||+|+||||+||+++||||+++.|+|++|+|+||++|||+|||
T Consensus 160 L~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdm 239 (322)
T COG3491 160 LPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVNIGDM 239 (322)
T ss_pred CChhhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeEEecCCCCeeECCCCCCeEEEeHHHH
Confidence 99 89988899999999999999998888888899999999999999999999999999899999999999999999999
Q ss_pred HHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCC-CcCCCCCCCCCCCc-----CHHHHHHHHHhc
Q 040085 236 LKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPN-ELVDDDHPLVYRPF-----KFSEFMAYFVNN 304 (316)
Q Consensus 236 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~-~~~~~~~~~~y~~~-----t~~e~~~~~~~~ 304 (316)
||+||||+|+||+|||+.++..+||||+||+.|+.|+.|.|+. .+.+...++++..- -+.+|.++.+++
T Consensus 240 Le~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~t~~~n~l~r~~~~n~~~~ 314 (322)
T COG3491 240 LERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPRGPGTDPDNPLLRDYATNFLKR 314 (322)
T ss_pred HHHHhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCCcccccCCcCCCCCCCchHHHHHHHHHHHH
Confidence 9999999999999999999888999999999999999999865 45566667777765 344555544444
No 17
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.1e-74 Score=532.00 Aligned_cols=290 Identities=28% Similarity=0.430 Sum_probs=251.0
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC---C
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSK---P 83 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~---~ 83 (316)
..+||||||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... .
T Consensus 35 ~~~iPvIDls~~--------~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~ 106 (337)
T PLN02639 35 CENVPVIDLGSP--------DRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKT 106 (337)
T ss_pred CCCCCeEECCCc--------cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCc
Confidence 357999999862 34679999999999999999999999999999999999999999999999975431 2
Q ss_pred CCCCCCCCC----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 040085 84 YRSYMGESP----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG- 158 (316)
Q Consensus 84 ~~GY~~~~~----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~- 158 (316)
.++|..... ..+++|.+.+... +. ....|.||+.+++||+.+++|++.|.+|+..|+++|+++||++
T Consensus 107 ~~~~~~~~~~~~~~~~~~e~~~~~~~--p~------~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 178 (337)
T PLN02639 107 MRLSTSFNVRKEKVHNWRDYLRLHCY--PL------DKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEAISESLGLEK 178 (337)
T ss_pred cccccccccccCcccCchheEEeeec--CC------cccchhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 333332221 1246666655321 11 1125789998899999999999999999999999999999999
Q ss_pred cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCC-CCceEEEecCCceEeccCCCCcEEEEhhHHHH
Q 040085 159 KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENN-VQGLEILNKDGVYVPVGVPDNASVVIVGDTLK 237 (316)
Q Consensus 159 ~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~-~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~ 237 (316)
++|.+.+....+.||++|||+++.++..+|+++|||+|+||||+||+ ++||||+ ++|+|++|+|.||++|||+||+|+
T Consensus 179 ~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pg~lVVNiGD~L~ 257 (337)
T PLN02639 179 DYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVL-KDGKWVAVNPHPGAFVINIGDQLQ 257 (337)
T ss_pred HHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEee-cCCeEEeccCCCCeEEEechhHHH
Confidence 89988887778899999999998877889999999999999999984 9999997 689999999999999999999999
Q ss_pred HHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc--ccccchhhc
Q 040085 238 AWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN--ISDDALEIY 313 (316)
Q Consensus 238 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~--~~~~~~~~~ 313 (316)
+||||+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|+|++||++.++.+ .-.+.|+.|
T Consensus 258 ~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~~~~~~~~~l~~~ 335 (337)
T PLN02639 258 ALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNLDQEHCLELF 335 (337)
T ss_pred HHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHHHHhccCCCchhhHhh
Confidence 9999999999999998877899999999999999999999999999999999999999999999887 234455554
No 18
>PLN02947 oxidoreductase
Probab=100.00 E-value=1.7e-74 Score=538.20 Aligned_cols=292 Identities=23% Similarity=0.366 Sum_probs=250.2
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC--CCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS--KPY 84 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~ 84 (316)
..+||||||+.+ .. . .+.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ...
T Consensus 64 ~~~iPvIDls~l--~~--~-~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~ 138 (374)
T PLN02947 64 NLKLPVIDLAEL--RG--S-NRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAP 138 (374)
T ss_pred CCCCCeEECccc--CC--c-cHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCC
Confidence 458999999984 32 2 4578899999999999999999999999999999999999999999999998643 233
Q ss_pred CCCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 040085 85 RSYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG- 158 (316)
Q Consensus 85 ~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~- 158 (316)
.||..... ..+|+|.+.+... +. . ...|.||+.+++||+.+++|++.|.+|+..|+++|+++||++
T Consensus 139 ~gyg~~~~~~~~~~~~~~e~~~~~~~--p~-----~-~~~~~WP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~ 210 (374)
T PLN02947 139 VRYGTSFNQNKDAVFCWRDFLKLVCH--PL-----S-DVLPHWPSSPADLRKVAATYAKATKRLFLELMEAILESLGIVK 210 (374)
T ss_pred eeeccccccccccccCceeceeeecC--Cc-----c-cccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 46643211 1245665554321 10 0 124689999999999999999999999999999999999996
Q ss_pred ---cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHH
Q 040085 159 ---KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 159 ---~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
++|.+.+....+.+|++|||||+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+|.||++|||+||+
T Consensus 211 ~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~-~g~Wi~V~p~pga~VVNvGD~ 289 (374)
T PLN02947 211 RGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEGLQIMH-AGRWVTVEPIPGSFVVNVGDH 289 (374)
T ss_pred cchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCCeeEeE-CCEEEeCCCCCCeEEEEeCce
Confidence 3455656666789999999999988889999999999999999999999999975 899999999999999999999
Q ss_pred HHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc--ccccchhh
Q 040085 236 LKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN--ISDDALEI 312 (316)
Q Consensus 236 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~--~~~~~~~~ 312 (316)
||+||||+|||++|||+.++.++||||+||+.|+.|++|.|+++++++++|++|+++||+||++...++ +....|+.
T Consensus 290 Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~ 368 (374)
T PLN02947 290 LEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLES 368 (374)
T ss_pred eeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhh
Confidence 999999999999999998888899999999999999999999999999999999999999999998877 33344443
No 19
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=8.5e-74 Score=526.26 Aligned_cols=281 Identities=24% Similarity=0.337 Sum_probs=245.1
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRS 86 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~G 86 (316)
+.+||||||+.. +..++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+|
T Consensus 24 ~~~iPvIDls~~-----------~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~-~~~G 91 (335)
T PLN02156 24 PVLIPVIDLTDS-----------DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP-DPFG 91 (335)
T ss_pred CCCCCcccCCCh-----------HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC-CCcc
Confidence 456999999751 2357899999999999999999999999999999999999999999998644 3458
Q ss_pred CCCCC--C--CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cc
Q 040085 87 YMGES--P--AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG--KL 160 (316)
Q Consensus 87 Y~~~~--~--~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~--~~ 160 (316)
|.... . ..+++|.+.+..+. . . ......|.||+.++.||+.+++|++.|.+|+.+|+++|+++||++ ++
T Consensus 92 y~~~~~~~~~~~~~~e~~~~~~~~--~-~--~~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~ 166 (335)
T PLN02156 92 YGTKRIGPNGDVGWLEYILLNANL--C-L--ESHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEK 166 (335)
T ss_pred cCccccCCCCCCCceeeEeeecCC--c-c--ccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHH
Confidence 84321 1 23688888776421 1 0 011236789998889999999999999999999999999999996 57
Q ss_pred hhhhcc--CccceeeeccccCCCCC--CCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHH
Q 040085 161 YVPHIQ--GSITLFRLMKYKVPPNN--ESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTL 236 (316)
Q Consensus 161 f~~~~~--~~~~~lr~~~Yp~~~~~--~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l 236 (316)
|.+++. ...+.||++|||+++.. +..+|+++|||+|+||||+||+++||||+.++|+|++|+|.||++|||+||+|
T Consensus 167 f~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l 246 (335)
T PLN02156 167 LSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTL 246 (335)
T ss_pred HHHHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHH
Confidence 877664 34578999999998753 35789999999999999999999999998889999999999999999999999
Q ss_pred HHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 237 KAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 237 ~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
|+||||+||||.|||+.+...+||||+||+.|+.|++|.|+++++++++|.+|+|+|++||+..++++
T Consensus 247 ~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~ 314 (335)
T PLN02156 247 QVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKT 314 (335)
T ss_pred HHHhCCeeeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhc
Confidence 99999999999999998877899999999999999999999999999999999999999999999988
No 20
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=6.8e-74 Score=525.33 Aligned_cols=281 Identities=22% Similarity=0.352 Sum_probs=247.2
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRS 86 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~G 86 (316)
..+||+|||+.+ .. + ++.+++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... .+|
T Consensus 4 ~~~iPvIDls~~--~~--~-~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~--~~g 76 (321)
T PLN02299 4 MESFPVIDMEKL--NG--E-ERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVA--SKG 76 (321)
T ss_pred CCCCCEEECcCC--Cc--c-cHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccC--CCC
Confidence 567999999984 32 2 4567899999999999999999999999999999999999999999999997532 357
Q ss_pred CCCCCC---CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchh
Q 040085 87 YMGESP---AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KLYV 162 (316)
Q Consensus 87 Y~~~~~---~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~f~ 162 (316)
|.+... ..|++|.|.+... +. ...+.||+.++.||+.+++|++.|.+++..|+++|+++||++ ++|.
T Consensus 77 y~~~~~~~~~~d~ke~~~~~~~--~~-------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 147 (321)
T PLN02299 77 LEGVQTEVEDLDWESTFFLRHL--PE-------SNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLK 147 (321)
T ss_pred cccccccCCCcCHHHHcccccC--Cc-------cccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 755432 3478888877531 11 124679998899999999999999999999999999999999 8887
Q ss_pred hhcc---CccceeeeccccCCCCCCCCcccccccCCCceeEEeeC-CCCceEEEecCCceEeccCCCCcEEEEhhHHHHH
Q 040085 163 PHIQ---GSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCEN-NVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKA 238 (316)
Q Consensus 163 ~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~ 238 (316)
+.+. ...+.||++||||++.++...|+++|||+|+||||+|| +++||||+ ++|+|++|+|.||++|||+||+||+
T Consensus 148 ~~~~~~~~~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pg~lvVNiGD~l~~ 226 (321)
T PLN02299 148 KAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWVDVPPMRHSIVVNLGDQLEV 226 (321)
T ss_pred HHhcCCCCccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcc-cCCeEEECCCCCCeEEEEeCHHHHH
Confidence 7664 24567999999999887778899999999999999997 59999997 7999999999999999999999999
Q ss_pred HhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCC--CCCCCCCcCHHHHHHHHHhc
Q 040085 239 WSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDD--HPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 239 ~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~--~~~~y~~~t~~e~~~~~~~~ 304 (316)
||||+|||+.|||+.++..+||||+||++|+.|++|+|++++++++ +|++|+|++++||++.++++
T Consensus 227 ~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~ 294 (321)
T PLN02299 227 ITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGL 294 (321)
T ss_pred HhCCceecccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHc
Confidence 9999999999999988778899999999999999999999999865 58999999999999999987
No 21
>PLN02704 flavonol synthase
Probab=100.00 E-value=2e-73 Score=526.23 Aligned_cols=282 Identities=24% Similarity=0.397 Sum_probs=245.1
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC---CC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS---KP 83 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~---~~ 83 (316)
..+||||||+.. ++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..
T Consensus 40 ~~~iPvIDls~~--------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~ 111 (335)
T PLN02704 40 DPQVPTIDLSDP--------DEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKS 111 (335)
T ss_pred CCCCCeEECCCc--------cHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCcc
Confidence 457999999862 2347889999999999999999999999999999999999999999999998754 24
Q ss_pred CCCCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 040085 84 YRSYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG 158 (316)
Q Consensus 84 ~~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 158 (316)
++||..... ..++++.+..... +. .....|.||+.+|+||+.+++|++.|.+|+..|+++|+++||++
T Consensus 112 ~~Gy~~~~~~~~~~~~~~~d~~~~~~~--p~-----~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 184 (335)
T PLN02704 112 IEGYGTKLQKEPEGKKAWVDHLFHRIW--PP-----SAINYQFWPKNPPSYREVNEEYAKYLRGVADKLFKTLSLGLGLE 184 (335)
T ss_pred cccccccccccccCcccceeeeEeeec--CC-----cccchhhCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 689965422 1234444422110 10 01124789998899999999999999999999999999999999
Q ss_pred -cchhhhccC--ccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHH
Q 040085 159 -KLYVPHIQG--SITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 159 -~~f~~~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
++|.+.+.. ..+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+
T Consensus 185 ~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p~pg~lvVNvGD~ 263 (335)
T PLN02704 185 EDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVF-RDDHWFDVKYIPNALVIHIGDQ 263 (335)
T ss_pred HHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEecCCCCceeEe-ECCEEEeCCCCCCeEEEEechH
Confidence 888876653 246899999999988778899999999999999999999999997 6899999999999999999999
Q ss_pred HHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 236 LKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 236 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
||+||||+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|+|++||+..++++
T Consensus 264 L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~~ 332 (335)
T PLN02704 264 IEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLNK 332 (335)
T ss_pred HHHHhCCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCCHHHHHHHHHhc
Confidence 999999999999999998888899999999999999999999999999999999999999999988764
No 22
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.5e-73 Score=525.29 Aligned_cols=286 Identities=24% Similarity=0.360 Sum_probs=244.7
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYR 85 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~ 85 (316)
.++||||||+.+ .+++++.+ ..+++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ..++
T Consensus 42 ~~~IPvIDls~~--~~~~~~~~-~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~ 118 (348)
T PLN00417 42 EMDIPAIDLSLL--LSSSDDGR-EELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQ 118 (348)
T ss_pred CCCCCeEEChhh--cCCCchHH-HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCcc
Confidence 358999999984 34444333 4569999999999999999999999999999999999999999999999764 3578
Q ss_pred CCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-c
Q 040085 86 SYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-K 159 (316)
Q Consensus 86 GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 159 (316)
||..... ..+++|.+.+... +.. ....|.||+.+++||+.+++|+.+|.+|+..|+++|+++||++ +
T Consensus 119 GY~~~~~~~~~~~~d~~e~~~~~~~--p~~-----~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~LGl~~~ 191 (348)
T PLN00417 119 GYGNDMILSDDQVLDWIDRLYLTTY--PED-----QRQLKFWPQVPVGFRETLHEYTMKQRLVIEKFFKAMARSLELEEN 191 (348)
T ss_pred ccccccccccCCCcCccceeecccC--Ccc-----cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 9965321 2356676655421 111 1235789998899999999999999999999999999999999 8
Q ss_pred chhhhccC-ccceeeeccccCCCCCCCCcccccccCCCceeEEeeC-CCCceEEEecCCceEeccCCCCcEEEEhhHHHH
Q 040085 160 LYVPHIQG-SITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCEN-NVQGLEILNKDGVYVPVGVPDNASVVIVGDTLK 237 (316)
Q Consensus 160 ~f~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~ 237 (316)
+|.+.+.. ..+.||++||||++.++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.||++|||+||+||
T Consensus 192 ~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pg~lVVNiGD~Le 270 (348)
T PLN00417 192 CFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFL-KDGKWYKAPIVPDTILINVGDQME 270 (348)
T ss_pred HHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEe-ECCeEEECCCCCCcEEEEcChHHH
Confidence 88776654 3467999999999887778999999999999999997 69999996 789999999999999999999999
Q ss_pred HHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHh
Q 040085 238 AWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVN 303 (316)
Q Consensus 238 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~ 303 (316)
+||||+|||++|||+.++..+||||+||++|+.|++|+|+++++++++|++|+++|.++.......
T Consensus 271 ~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~~~~~~~~~~~ 336 (348)
T PLN00417 271 IMSNGIYKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVKKYVELFFKYY 336 (348)
T ss_pred HHhCCeecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999887789999999999999999999999999999999999995554444433
No 23
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=1.7e-72 Score=514.55 Aligned_cols=287 Identities=32% Similarity=0.536 Sum_probs=253.3
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC-CCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSK-PYR 85 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~-~~~ 85 (316)
..+||+|||+.+ ...++ .+..++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.... ...
T Consensus 15 ~~~iPvIDls~~--~~~~~-~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~ 91 (322)
T KOG0143|consen 15 ELDIPVIDLSCL--DSDDP-GREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYR 91 (322)
T ss_pred CCCcCeEECCCC--CCcch-hHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCcc
Confidence 568999999973 33333 57788999999999999999999999999999999999999999999999998765 678
Q ss_pred CCCCCCCC-----CCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-c
Q 040085 86 SYMGESPA-----VPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-K 159 (316)
Q Consensus 86 GY~~~~~~-----~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~ 159 (316)
||...... .+|.+.+.+... + ...+..+.||+.++.||+++++|.+++.+|+..|+++|+++||++ +
T Consensus 92 gY~~~~~~~~~~~~~w~d~~~~~~~--p-----~~~~~~~~wp~~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~ 164 (322)
T KOG0143|consen 92 GYGTSFILSPLKELDWRDYLTLLSA--P-----ESSFDPNLWPEGPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPE 164 (322)
T ss_pred cccccccccccccccchhheeeecc--C-----ccccCcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 99765432 234444433220 1 011456789999999999999999999999999999999999999 7
Q ss_pred chhhhccC-ccceeeeccccCCCCCCCCcccccccCCCceeEEeeC-CCCceEEEecCCceEeccCCCCcEEEEhhHHHH
Q 040085 160 LYVPHIQG-SITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCEN-NVQGLEILNKDGVYVPVGVPDNASVVIVGDTLK 237 (316)
Q Consensus 160 ~f~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~ 237 (316)
++.+.++. ..+.||++|||||++++.++|+++|||.|+||+|+|| +++||||..++|+|++|+|.||++|||+||+||
T Consensus 165 ~~~~~~~~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~ 244 (322)
T KOG0143|consen 165 YLEKLFGETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQ 244 (322)
T ss_pred HHHHhhCCccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHh
Confidence 77777766 4669999999999999999999999999999999998 799999975689999999999999999999999
Q ss_pred HHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 238 AWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 238 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
+||||+|||+.|||++++.++|+|+|+|+.|+.|.+|.|+++++++. |++|+++|+.+|++.+.++
T Consensus 245 ~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~ 310 (322)
T KOG0143|consen 245 ILSNGRYKSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSK 310 (322)
T ss_pred HhhCCcccceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCC-CCccCcEEHHHHHHHHHhc
Confidence 99999999999999999888899999999999999999999998887 7789999999999999988
No 24
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=1e-69 Score=493.24 Aligned_cols=271 Identities=26% Similarity=0.380 Sum_probs=233.1
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-C--CCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-K--PYR 85 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~--~~~ 85 (316)
+||+|||+.+ .. +++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|...... + ..+
T Consensus 2 ~iPvIDls~~--~~---~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~~~~~~~~~~~~ 76 (303)
T PLN02403 2 EIPVIDFDQL--DG---EKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFYESEIAKALDNE 76 (303)
T ss_pred CCCeEeCccC--Cc---ccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhhcccccCccccc
Confidence 6999999984 32 24678999999999999999999999999999999999999999999999622111 1 123
Q ss_pred CCCCCCCCCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchhhh
Q 040085 86 SYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KLYVPH 164 (316)
Q Consensus 86 GY~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~f~~~ 164 (316)
||. ...|++|.|.++.. +. ...|.||+.+|+||+.+++|+++|.+++..|+++|+++||++ ++|.+.
T Consensus 77 ~~~---~~~d~kE~~~~~~~--p~-------~~~~~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 144 (303)
T PLN02403 77 GKT---SDVDWESSFFIWHR--PT-------SNINEIPNLSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEA 144 (303)
T ss_pred CCC---CCccHhhhcccccC--Cc-------cchhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 332 24589999988641 11 124679988899999999999999999999999999999999 888777
Q ss_pred cc---CccceeeeccccCCCCCCCCcccccccCCCceeEEeeC-CCCceEEEecCCceEeccCCC-CcEEEEhhHHHHHH
Q 040085 165 IQ---GSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCEN-NVQGLEILNKDGVYVPVGVPD-NASVVIVGDTLKAW 239 (316)
Q Consensus 165 ~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~-g~~vVn~Gd~l~~~ 239 (316)
+. ...+.||++|||+++.++...|+++|||+|+||||+|+ +++||||+ ++|+|++|+|.| |++|||+||+||+|
T Consensus 145 ~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~-~~g~Wi~V~p~p~~~lvVNvGD~L~~~ 223 (303)
T PLN02403 145 FSGNKGPSVGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFL-KDGKWVPIPPSKNNTIFVNTGDQLEVL 223 (303)
T ss_pred hccCCCccceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEec-cCCeEEECCCCCCCEEEEEehHHHHHH
Confidence 65 33456999999999877777899999999999999997 49999995 789999999999 69999999999999
Q ss_pred hCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCC-CcCHHHHHHHHHhc
Q 040085 240 SNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYR-PFKFSEFMAYFVNN 304 (316)
Q Consensus 240 TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~-~~t~~e~~~~~~~~ 304 (316)
|||+|||++|||+.++..+|||++||++|+.|++|.|+++++ |+ ++|++||++.+.++
T Consensus 224 Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~-------~~~~~~~~eyl~~~~~~ 282 (303)
T PLN02403 224 SNGRYKSTLHRVMADKNGSRLSIATFYNPAGDAIISPAPKLL-------YPSNYRFQDYLKLYSTT 282 (303)
T ss_pred hCCeeecccceeecCCCCCEEEEEEEEcCCCCCeEeCchhhC-------CCCCccHHHHHHHHHHh
Confidence 999999999999988778899999999999999999999875 34 49999999998874
No 25
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.3e-68 Score=491.41 Aligned_cols=269 Identities=25% Similarity=0.379 Sum_probs=226.8
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC----
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSK---- 82 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~---- 82 (316)
..+||+|||+.+ .+++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++....
T Consensus 36 ~~~IPvIDls~~------------~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~ 103 (341)
T PLN02984 36 DIDIPVIDMECL------------DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLS 103 (341)
T ss_pred cCCCCeEeCcHH------------HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCc
Confidence 456999999862 2479999999999999999999999999999999999999999999985211
Q ss_pred CCCCCCCCCC------------CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 040085 83 PYRSYMGESP------------AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKM 150 (316)
Q Consensus 83 ~~~GY~~~~~------------~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ 150 (316)
...||..... ..|++|.|.++.. .. ..... .++ +|...|+||+.+++|+++|.+|+..|+++
T Consensus 104 ~~~g~~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~---~~-~~~~~-~p~-~~~~~p~fr~~~~~y~~~~~~La~~ll~~ 177 (341)
T PLN02984 104 YFWGTPALTPSGKALSRGPQESNVNWVEGFNIPLS---SL-SLLQT-LSC-SDPKLESFRVLMEEYGKHLTRIAVTLFEA 177 (341)
T ss_pred cccCcccccccccccccccccCCCCeeeEEeCcCC---ch-hhhhh-cCC-CCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223321110 2478999988752 10 00000 111 22346799999999999999999999999
Q ss_pred HHHhcCCC---cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCc
Q 040085 151 VFESFGTG---KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNA 227 (316)
Q Consensus 151 l~~~Lgl~---~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~ 227 (316)
||++||++ ++|.+++..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||+
T Consensus 178 lA~~Lgl~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~-~~g~Wv~V~p~pga 256 (341)
T PLN02984 178 IAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVGGLEVM-KDGEWFNVKPIANT 256 (341)
T ss_pred HHHHcCCCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCCCeeEe-eCCceEECCCCCCe
Confidence 99999997 467788877788999999999987777899999999999999999999999996 68999999999999
Q ss_pred EEEEhhHHHHHHhCCCCcCCCceee-cCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 228 SVVIVGDTLKAWSNGRLKAPKHRVM-MSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 228 ~vVn~Gd~l~~~TnG~~ks~~HRV~-~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
+|||+||+||+||||+||||+|||+ .++..+|||++||++|+.|++|.| ++|+|+|++||+..++..
T Consensus 257 lVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~p----------~~y~p~t~~e~l~~~~~~ 324 (341)
T PLN02984 257 LVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIKS----------SKYKPFTYSDFEAQVQLD 324 (341)
T ss_pred EEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEcc----------CCcCcccHHHHHHHHHhh
Confidence 9999999999999999999999996 455678999999999999999964 589999999999998866
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.6e-62 Score=435.15 Aligned_cols=236 Identities=22% Similarity=0.338 Sum_probs=210.5
Q ss_pred HHHHHHhcC-CCHHHHhhhcCCC---CCCCCCCCCC-------CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchH
Q 040085 61 FKAMNALFD-LPEETKSKYASSK---PYRSYMGESP-------AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSF 129 (316)
Q Consensus 61 ~~~~~~fF~-lP~e~K~~~~~~~---~~~GY~~~~~-------~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~f 129 (316)
.+.+++||+ ||.|+|+++..+. .++||..... ..|++|.|.+... +. ....+|.||+.+|.|
T Consensus 2 ~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~~--p~-----~~~~~n~wP~~~~~f 74 (262)
T PLN03001 2 RSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTF--PL-----SRRNPSHWPDFPPDY 74 (262)
T ss_pred hHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeeec--Cc-----cccchhhCCCCcHHH
Confidence 567999997 9999999987642 4789943221 2378999987531 11 112368899988999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCc
Q 040085 130 CETLKSVTSKMLELNYTILKMVFESFGTG-KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQG 208 (316)
Q Consensus 130 r~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~G 208 (316)
|+.+++|+++|.+|+.+|+++|+++||++ ++|.+++....+.+|++||||++.++..+|+++|||+|+||||+||+++|
T Consensus 75 ~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~G 154 (262)
T PLN03001 75 REVVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVEG 154 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEeCCCCc
Confidence 99999999999999999999999999999 88988887777889999999998888889999999999999999999999
Q ss_pred eEEEecCCceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCC
Q 040085 209 LEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLV 288 (316)
Q Consensus 209 Lqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~ 288 (316)
|||+ ++|+|++|+|.||++||||||+|++||||+|||++|||+.++..+||||+||++|+.|++|.|+++++++++|++
T Consensus 155 LqV~-~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~ 233 (262)
T PLN03001 155 LQLL-KDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPR 233 (262)
T ss_pred eEEe-eCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCc
Confidence 9996 689999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCCcCHHHHHHHHHhc
Q 040085 289 YRPFKFSEFMAYFVNN 304 (316)
Q Consensus 289 y~~~t~~e~~~~~~~~ 304 (316)
|+|++++||+..++++
T Consensus 234 y~~~~~~e~l~~~~~~ 249 (262)
T PLN03001 234 YCEIVYGEYVSSWYSK 249 (262)
T ss_pred CCCccHHHHHHHHHHh
Confidence 9999999999988886
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.93 E-value=9.6e-26 Score=172.21 Aligned_cols=95 Identities=40% Similarity=0.647 Sum_probs=74.8
Q ss_pred ceeeeccccCCCCCCCCcccccccCC--CceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHHHHhCCCCcCC
Q 040085 170 TLFRLMKYKVPPNNESAVGLIPHTDK--NVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAP 247 (316)
Q Consensus 170 ~~lr~~~Yp~~~~~~~~~~~~~HtD~--~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~ 247 (316)
+.+|+++|++ ++...++++|+|. +++|+|+|++++||||++ +++|+.|++.++.++||+||+|++||||.++|+
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~-~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~ 77 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRD-DGEWVDVPPPPGGFIVNFGDALEILTNGRYPAT 77 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEE-TTEEEE----TTCEEEEEBHHHHHHTTTSS---
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccc-cccccCccCccceeeeeceeeeecccCCccCCc
Confidence 5799999998 5567899999999 999999999999999975 458999999999999999999999999999999
Q ss_pred CceeecCCCCceEEEEEeeCC
Q 040085 248 KHRVMMSGNKERYSFGSFSMP 268 (316)
Q Consensus 248 ~HRV~~~~~~~R~Si~~F~~P 268 (316)
.|||+.+....|+|++||++|
T Consensus 78 ~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 78 LHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp -EEEE--STS-EEEEEEEEE-
T ss_pred eeeeEcCCCCCEEEEEEEECC
Confidence 999999888899999999987
No 28
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.91 E-value=1.4e-24 Score=170.95 Aligned_cols=110 Identities=33% Similarity=0.545 Sum_probs=88.9
Q ss_pred CceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCCCCCC
Q 040085 10 IPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRSYMG 89 (316)
Q Consensus 10 iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~GY~~ 89 (316)
||||||+. +.+.|.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.++..++||.+
T Consensus 1 iPvIDls~------~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~ 74 (116)
T PF14226_consen 1 IPVIDLSP------DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARSPSYRGYSP 74 (116)
T ss_dssp --EEEHGG------CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCCTTCSEEEE
T ss_pred CCeEECCC------CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCCCCCccccc
Confidence 79999985 345889999999999999999999999999999999999999999999999999977778999987
Q ss_pred CCC------CCCcceeeecCCCCCCCCchhhhhccCCCCCCC
Q 040085 90 ESP------AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQG 125 (316)
Q Consensus 90 ~~~------~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~ 125 (316)
.+. ..|++|+|.++.+...+.+.....+.+|+||++
T Consensus 75 ~~~~~~~~~~~d~~E~~~~~~~~~~~~p~~~~~~~~n~WP~~ 116 (116)
T PF14226_consen 75 PGSESTDGGKPDWKESFNIGPDLPEDDPAYPPLYGPNIWPDE 116 (116)
T ss_dssp SEEECCTTCCCCSEEEEEEECC-STTCHHTGCTS-GGGS-TT
T ss_pred CCccccCCCCCCceEEeEEECCCCccccccccccCCCCCCCC
Confidence 532 468999999987533333333445678999973
No 29
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.81 E-value=2.1e-19 Score=141.44 Aligned_cols=79 Identities=25% Similarity=0.482 Sum_probs=68.7
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC-CCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSK-PYRS 86 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~-~~~G 86 (316)
.+||||||+.+ .++++ .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++...+ ...|
T Consensus 36 ~~iPvIDls~~--~~~~~-~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~~~~~g 112 (120)
T PLN03176 36 NEIPVISIAGI--DDGGE-KRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSGGKKGG 112 (120)
T ss_pred CCCCeEECccc--cCCch-HHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCCCccCC
Confidence 47999999984 44444 67789999999999999999999999999999999999999999999999997553 4568
Q ss_pred CCC
Q 040085 87 YMG 89 (316)
Q Consensus 87 Y~~ 89 (316)
|..
T Consensus 113 y~~ 115 (120)
T PLN03176 113 FIV 115 (120)
T ss_pred cch
Confidence 843
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=97.01 E-value=0.00061 Score=51.50 Aligned_cols=79 Identities=23% Similarity=0.219 Sum_probs=55.0
Q ss_pred eeeccccCCCCCCCCcccccccCC-----CceeEEee--CC-----CCceEEEe---cCCceEecc-----CCCCcEEEE
Q 040085 172 FRLMKYKVPPNNESAVGLIPHTDK-----NVLSILCE--NN-----VQGLEILN---KDGVYVPVG-----VPDNASVVI 231 (316)
Q Consensus 172 lr~~~Yp~~~~~~~~~~~~~HtD~-----~~lTlL~q--d~-----~~GLqv~~---~~g~W~~V~-----p~~g~~vVn 231 (316)
+++++|++. -.+.+|+|. ..+|+|+. +. .+.|++.. .++....++ |.+|.+|+.
T Consensus 1 ~~~~~y~~G------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPPG------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEETT------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECcC------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 467777553 357899998 58888843 22 36688854 245566666 999999988
Q ss_pred hhHHHHHHhCCCCcCCCceeecC-CCCceEEEEEeeC
Q 040085 232 VGDTLKAWSNGRLKAPKHRVMMS-GNKERYSFGSFSM 267 (316)
Q Consensus 232 ~Gd~l~~~TnG~~ks~~HRV~~~-~~~~R~Si~~F~~ 267 (316)
-+ ...+|+|... ....|+++.+|++
T Consensus 75 ~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 66 4589999877 6789999999863
No 31
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=95.87 E-value=0.069 Score=46.67 Aligned_cols=49 Identities=20% Similarity=0.083 Sum_probs=38.7
Q ss_pred CCceEEEecCCceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeC
Q 040085 206 VQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSM 267 (316)
Q Consensus 206 ~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 267 (316)
.|.|.+.+..|. ..|.|..|.+||.-. +.+|+|.......||++.+..+
T Consensus 129 GGEl~~~~~~g~-~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGE-HRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCc-EEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecHH
Confidence 466888766564 688999999998874 4889998766779999888764
No 32
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=95.26 E-value=0.18 Score=42.21 Aligned_cols=104 Identities=14% Similarity=0.067 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhcCCCcchhhhccCccceeeeccccCCCCCCCCcccccccCCC--------ceeEEee--C--CCCceEE
Q 040085 144 NYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKN--------VLSILCE--N--NVQGLEI 211 (316)
Q Consensus 144 ~~~ll~~l~~~Lgl~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~q--d--~~~GLqv 211 (316)
...|.+.+...++++.. .......+++.+|.+. -...+|.|.. .+|+++. + ..|.|.+
T Consensus 61 ~~~l~~~i~~~~~~~~~----~~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f 130 (178)
T smart00702 61 IERIRQRLADFLGLLRG----LPLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVF 130 (178)
T ss_pred HHHHHHHHHHHHCCCch----hhccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEe
Confidence 33444555555555411 1122345788899763 2466788866 5888765 2 2344776
Q ss_pred EecCC-ceEeccCCCCcEEEEh-hHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeC
Q 040085 212 LNKDG-VYVPVGVPDNASVVIV-GDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSM 267 (316)
Q Consensus 212 ~~~~g-~W~~V~p~~g~~vVn~-Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 267 (316)
...+. .-..|.|..|.+|+.- ++ +.++|.|.......|+++..+++
T Consensus 131 ~~~~~~~~~~v~P~~G~~v~f~~~~----------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 131 PGLGLMVCATVKPKKGDLLFFPSGR----------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred cCCCCccceEEeCCCCcEEEEeCCC----------CCccccCCcceeCCEEEEEEEEC
Confidence 43321 2568999999888754 32 26899998776678999988764
No 33
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=95.18 E-value=0.26 Score=41.18 Aligned_cols=70 Identities=17% Similarity=0.121 Sum_probs=47.7
Q ss_pred cccccccCC----CceeEEeeC----CCCceEEEec---CCceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCC
Q 040085 187 VGLIPHTDK----NVLSILCEN----NVQGLEILNK---DGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSG 255 (316)
Q Consensus 187 ~~~~~HtD~----~~lTlL~qd----~~~GLqv~~~---~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~ 255 (316)
.....|.|. ..+|++..- ..+|+.+... +.-=+.|.+.+|++++..|-.+ .|-|..-.
T Consensus 85 r~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~-----------~Hgvtpv~ 153 (171)
T PF12851_consen 85 RCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRE-----------LHGVTPVE 153 (171)
T ss_pred cCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccce-----------eeecCccc
Confidence 456789998 777877762 2467666433 1123788999999999998433 45554322
Q ss_pred -----CCceEEEEEeeC
Q 040085 256 -----NKERYSFGSFSM 267 (316)
Q Consensus 256 -----~~~R~Si~~F~~ 267 (316)
+..|+|++||++
T Consensus 154 ~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 154 SPNRNHGTRISLVFYQH 170 (171)
T ss_pred CCCCCCCeEEEEEEEeE
Confidence 368999999985
No 34
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=87.24 E-value=9 Score=32.89 Aligned_cols=36 Identities=19% Similarity=0.166 Sum_probs=30.0
Q ss_pred ceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCC-CCceEEEEE
Q 040085 217 VYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSG-NKERYSFGS 264 (316)
Q Consensus 217 ~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~-~~~R~Si~~ 264 (316)
.|+.|.|.+|.+|+.-.. -.|+|..+. +.+|+||+|
T Consensus 160 ~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSF 196 (201)
T TIGR02466 160 RFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSF 196 (201)
T ss_pred ccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEE
Confidence 488999999999988763 479998774 578999998
No 35
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=81.73 E-value=2 Score=32.24 Aligned_cols=37 Identities=22% Similarity=0.130 Sum_probs=24.0
Q ss_pred CceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCC-CCceEEEEE
Q 040085 216 GVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSG-NKERYSFGS 264 (316)
Q Consensus 216 g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~-~~~R~Si~~ 264 (316)
..+..++|.+|.+||.-+. ..|+|.... +.+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 4688899999999999884 579998764 468999997
No 36
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=79.25 E-value=10 Score=32.88 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=45.6
Q ss_pred eeeccccCCCCCCCCcccccccCCC-----ceeEEeeCCCCc-eEEE--ecCCceEeccCCCCcEEEEhhHHHHHHhCCC
Q 040085 172 FRLMKYKVPPNNESAVGLIPHTDKN-----VLSILCENNVQG-LEIL--NKDGVYVPVGVPDNASVVIVGDTLKAWSNGR 243 (316)
Q Consensus 172 lr~~~Yp~~~~~~~~~~~~~HtD~~-----~lTlL~qd~~~G-Lqv~--~~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~ 243 (316)
.=+|+|.+. . +++.|.|-. ..-+-++=+.+. +.+. .+++.+..+....|.++|.-|+. +.|
T Consensus 118 ~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~---- 186 (213)
T PRK15401 118 CLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLR---- 186 (213)
T ss_pred EEEEeccCc-----C-ccccccCCCcccCCCCEEEEeCCCCeEEEecccCCCCceEEEEeCCCCEEEECchH-hhe----
Confidence 447888642 2 799999942 111111112222 2232 23456899999999999999985 433
Q ss_pred CcCCCceeecCC-------CCceEEEEE
Q 040085 244 LKAPKHRVMMSG-------NKERYSFGS 264 (316)
Q Consensus 244 ~ks~~HRV~~~~-------~~~R~Si~~ 264 (316)
.|.|.... +..|+|+.|
T Consensus 187 ----~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 187 ----YHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred ----eccCCcCCCCcCCCCCCCeEEEEe
Confidence 34443211 236999987
No 37
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=74.79 E-value=5.5 Score=33.47 Aligned_cols=85 Identities=21% Similarity=0.286 Sum_probs=43.4
Q ss_pred eeeeccccCCCCCCCCcccccccCCCce-------eEEeeCCCCceEEEec--CCceEeccCCCCcEEEEhhHHHHHHhC
Q 040085 171 LFRLMKYKVPPNNESAVGLIPHTDKNVL-------SILCENNVQGLEILNK--DGVYVPVGVPDNASVVIVGDTLKAWSN 241 (316)
Q Consensus 171 ~lr~~~Yp~~~~~~~~~~~~~HtD~~~l-------TlL~qd~~~GLqv~~~--~g~W~~V~p~~g~~vVn~Gd~l~~~Tn 241 (316)
..-+|+|.+ .. ++++|.|...+ ||=+- ...-+.+... .+..+.+...+|+++|.-|++=..| .
T Consensus 98 ~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG-~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~-H 169 (194)
T PF13532_consen 98 QCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLG-SSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW-H 169 (194)
T ss_dssp EEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEE-S-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-E
T ss_pred EEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEc-cCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-e
Confidence 455788865 23 89999997633 22221 1122444432 3679999999999999999986655 4
Q ss_pred CCCcCCCceeec--CCCCceEEEEE
Q 040085 242 GRLKAPKHRVMM--SGNKERYSFGS 264 (316)
Q Consensus 242 G~~ks~~HRV~~--~~~~~R~Si~~ 264 (316)
|..+... .... .....|+||.|
T Consensus 170 ~I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 170 GIPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp EE-S-SC-EEEESTEE-S-EEEEEE
T ss_pred EcccccC-CccccccCCCCEEEEEe
Confidence 4322211 0000 01237999986
No 38
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=72.77 E-value=3.1 Score=39.63 Aligned_cols=54 Identities=13% Similarity=0.233 Sum_probs=37.3
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFD 69 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 69 (316)
+.-||.||++++ .++ ...++..+.+++.|++.|.|+ ||.+...+..+..++|.+
T Consensus 47 ~~~IP~i~f~di--~~~------~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 47 SSIIPEIDFADI--ENG------GVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp --SS-EEEHHHH--HCT---------HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCCceeeHHHH--hCC------CCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 356999999984 333 345778888999999999887 898887777777777643
No 39
>PRK08130 putative aldolase; Validated
Probab=68.57 E-value=7.4 Score=33.59 Aligned_cols=50 Identities=8% Similarity=0.053 Sum_probs=34.4
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||++++.. ++++ ++++++.+++++...+.|.|||+= .+.+++++..+..
T Consensus 127 ~i~v~~y~~----~g~~----~la~~~~~~l~~~~~vll~nHGvi~~G~s~~~A~~~~e~ 178 (213)
T PRK08130 127 HVPLIPYYR----PGDP----AIAEALAGLAARYRAVLLANHGPVVWGSSLEAAVNATEE 178 (213)
T ss_pred ccceECCCC----CChH----HHHHHHHHHhccCCEEEEcCCCCeeeCCCHHHHHHHHHH
Confidence 578887754 2444 788889999999999999999963 2334444444433
No 40
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=67.08 E-value=8.4 Score=32.41 Aligned_cols=49 Identities=22% Similarity=0.274 Sum_probs=34.1
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMN 65 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 65 (316)
.||++++.. .+++ ++++++.+++++...+.|.|||+= -+.+++++..+.
T Consensus 120 ~v~v~~~~~----~g~~----~la~~~~~~l~~~~~vll~nHGv~~~G~~~~eA~~~~e 170 (184)
T PRK08333 120 KIPILPFRP----AGSV----ELAEQVAEAMKEYDAVIMERHGIVTVGRSLREAFYKAE 170 (184)
T ss_pred CEeeecCCC----CCcH----HHHHHHHHHhccCCEEEEcCCCCEEEcCCHHHHHHHHH
Confidence 688888764 2444 778889999988889999999963 233444444333
No 41
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=57.66 E-value=21 Score=31.00 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=29.1
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP 53 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 53 (316)
.+|++++.. ++++ ++++.+.+++.+...+.|.|||+-
T Consensus 127 ~v~~~~y~~----~gs~----ela~~v~~~l~~~~~vlL~nHGv~ 163 (217)
T PRK05874 127 DVRCTEYAA----SGTP----EVGRNAVRALEGRAAALIANHGLV 163 (217)
T ss_pred ceeeecCCC----CCcH----HHHHHHHHHhCcCCEEEEcCCCCe
Confidence 477777753 3444 788899999999999999999963
No 42
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=51.65 E-value=26 Score=31.57 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=28.1
Q ss_pred CceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC
Q 040085 10 IPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP 53 (316)
Q Consensus 10 iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 53 (316)
||++.+.. +|+. ++++.+.+++++..-+.|.|||+=
T Consensus 178 i~vvp~~~----pGs~----eLA~~v~~~l~~~~avLL~nHGvv 213 (270)
T TIGR02624 178 VGIIPWMV----PGTN----EIGEATAEKMKEHRLVLWPHHGIF 213 (270)
T ss_pred cccccCcC----CCCH----HHHHHHHHHhccCCEEEEcCCCCe
Confidence 66666543 4555 788889999999899999999963
No 43
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=51.57 E-value=33 Score=28.69 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=27.0
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKI 52 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 52 (316)
.||++ +.. .+++ ++++.+.+++.+.-.+.|.|||+
T Consensus 115 ~ipv~-~~~----~~~~----~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 115 TIPVV-GGD----IGSG----ELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CEeEE-eCC----CCCH----HHHHHHHHHHhhCCEEEEcCCCc
Confidence 58888 332 3444 67888899999988999999996
No 44
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=51.55 E-value=28 Score=31.39 Aligned_cols=50 Identities=10% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||++.+.. .++. ++++.+.+++.+...+.|.|||+- -+.+++++..+..
T Consensus 179 ~i~vvpy~~----pgs~----eLa~~v~~~l~~~~avLL~nHGvv~~G~~l~eA~~~~e~ 230 (274)
T PRK03634 179 GVGIVPWMV----PGTD----EIGQATAEKMQKHDLVLWPKHGVFGSGPTLDEAFGLIDT 230 (274)
T ss_pred ceeEecCCC----CCCH----HHHHHHHHHhccCCEEEEcCCCCeEecCCHHHHHHHHHH
Confidence 467777653 3444 778888999988899999999973 2334444444433
No 45
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=49.78 E-value=21 Score=30.81 Aligned_cols=50 Identities=10% Similarity=0.158 Sum_probs=32.8
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||++++.. +++. ++++.+.+++.+...+.|.|||+- -+.+++++..+..
T Consensus 124 ~i~~~~y~~----~gs~----~la~~v~~~l~~~~~vll~nHGv~~~G~~~~eA~~~~e~ 175 (214)
T PRK06833 124 NVRCAEYAT----FGTK----ELAENAFEAMEDRRAVLLANHGLLAGANNLKNAFNIAEE 175 (214)
T ss_pred CeeeccCCC----CChH----HHHHHHHHHhCcCCEEEECCCCCEEEeCCHHHHHHHHHH
Confidence 466666643 3443 678888899999999999999963 2334444444433
No 46
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=49.54 E-value=14 Score=30.89 Aligned_cols=37 Identities=14% Similarity=0.352 Sum_probs=28.7
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHh-hcceEEEEcCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALE-THGFFVMYHDKI 52 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~-~~Gff~l~nhgi 52 (316)
..+|+|++.. .+++ ++++.|.++++ +...+.|.|||+
T Consensus 122 ~~v~~~~~~~----~~~~----~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAP----PGSE----ELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THS----TTCH----HHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeecccc----ccch----hhhhhhhhhhcCCceEEeecCCce
Confidence 5689999865 2444 56788999998 889999999996
No 47
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=48.30 E-value=37 Score=29.31 Aligned_cols=49 Identities=18% Similarity=0.139 Sum_probs=33.0
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMN 65 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 65 (316)
.||++.+.. .+++ ++++.+.+++.+...+.|.|||+- -+.+++++..+.
T Consensus 122 ~v~~~~y~~----~gs~----~la~~~~~~l~~~~~vLl~nHGv~~~G~~~~~A~~~~e 172 (215)
T PRK08087 122 SIPCAPYAT----FGTR----ELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAH 172 (215)
T ss_pred CceeecCCC----CCCH----HHHHHHHHHhCcCCEEEecCCCCEEEcCCHHHHHHHHH
Confidence 478887654 2444 678888889988889999999973 233444444333
No 48
>PRK06755 hypothetical protein; Validated
Probab=45.19 E-value=33 Score=29.64 Aligned_cols=49 Identities=16% Similarity=0.220 Sum_probs=32.0
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMN 65 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 65 (316)
+||+|++... ++ .++++.+.+++++...+.|.|||+- -..+++++..+.
T Consensus 136 ~IPiv~~~~~----~~----~~la~~~~~~~~~~~avLl~~HGv~~~G~~l~eA~~~~E 186 (209)
T PRK06755 136 TIPIVEDEKK----FA----DLLENNVPNFIEGGGVVLVHNYGMIVWGKTPEEAKKWLE 186 (209)
T ss_pred EEEEEeCCCc----hh----HHHHHHHHhhccCCCEEEEcCCCeEEEcCCHHHHHHHHH
Confidence 5899988652 22 3666777777778888999999973 123444444333
No 49
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=43.74 E-value=33 Score=32.26 Aligned_cols=53 Identities=13% Similarity=0.021 Sum_probs=37.2
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFD 69 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 69 (316)
..++|.||++.. + .+ + +...++.+++.++|++.+.+-.++.+. +.+.++.|-.
T Consensus 107 ~~~~~~~d~~~~-~-~~-~----~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G~ 159 (366)
T TIGR02409 107 ELSLPKFDHEAV-M-KD-D----SVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIGF 159 (366)
T ss_pred cccCCceeHHHH-h-CC-H----HHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhcc
Confidence 356888998773 2 22 2 467889999999999999998876643 3445555543
No 50
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=43.09 E-value=50 Score=28.46 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=39.2
Q ss_pred ceeeeccccCCCC-CCCCcccccccCCCceeEEeeCCCCceEEEe-cCCceEeccCCCCcEEEEhhHHHH
Q 040085 170 TLFRLMKYKVPPN-NESAVGLIPHTDKNVLSILCENNVQGLEILN-KDGVYVPVGVPDNASVVIVGDTLK 237 (316)
Q Consensus 170 ~~lr~~~Yp~~~~-~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~-~~g~W~~V~p~~g~~vVn~Gd~l~ 237 (316)
..+|.+||.|... ++-...+..+ -.++.|+..+-..+.. +.|.=+.|||.-|+.++|+||-=-
T Consensus 90 G~~~~~H~Hp~ade~E~y~vi~G~-----g~m~v~~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~pL 154 (209)
T COG2140 90 GAMRELHYHPNADEPEIYYVLKGE-----GRMLVQKPEGEARVIAVRAGDVIYVPPGYGHYTINTGDEPL 154 (209)
T ss_pred CcccccccCCCCCcccEEEEEecc-----EEEEEEcCCCcEEEEEecCCcEEEeCCCcceEeecCCCCCE
Confidence 4588899987543 3333334322 2445555544444432 347788899999999999998433
No 51
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=42.15 E-value=30 Score=29.81 Aligned_cols=36 Identities=11% Similarity=0.262 Sum_probs=26.4
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKI 52 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 52 (316)
.||++.+.. .++. ++++.+.+++.+...+.|.|||+
T Consensus 121 ~i~~v~y~~----~gs~----~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 121 NIPCVPYAT----FGST----KLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred CccccCCCC----CChH----HHHHHHHHHhhhCCEEehhcCCC
Confidence 366666654 2333 67778888888889999999996
No 52
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=39.60 E-value=47 Score=31.15 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=35.5
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFD 69 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 69 (316)
.+|.+|+... +. +++ +...++.+++.++|+..+.|-.++.+... +.++.|..
T Consensus 100 ~~~~~~~~~~-~~-~~d----~~l~~~l~~l~~~G~v~~~g~~~~~~~~~---~~a~riG~ 151 (362)
T TIGR02410 100 KDPSVHFKTT-YD-HTD----STLKSFSKNIYKYGFTFVDNVPVTPEATE---KLCERISI 151 (362)
T ss_pred cCCceeHHHH-hc-cCH----HHHHHHHHHHHhhCEEEEcCCCCCHHHHH---HHHHHhcc
Confidence 4577777663 22 222 56788999999999999999888765443 44555533
No 53
>PRK06357 hypothetical protein; Provisional
Probab=37.56 E-value=53 Score=28.41 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=25.8
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhc------ceEEEEcCCCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETH------GFFVMYHDKIP 53 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~------Gff~l~nhgi~ 53 (316)
.||++.+.. .+++ ++++.+.+++++. ..+.|.|||+=
T Consensus 130 ~i~~~p~~~----~gs~----ela~~v~~~l~~~~~~~~~~~vLl~nHGvv 172 (216)
T PRK06357 130 KIPTLPFAP----ATSP----ELAEIVRKHLIELGDKAVPSAFLLNSHGIV 172 (216)
T ss_pred CcceecccC----CCcH----HHHHHHHHHHhhcCcccCCCEEEECCCCCe
Confidence 467776654 2333 7777788888764 48999999963
No 54
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=37.43 E-value=43 Score=28.33 Aligned_cols=24 Identities=13% Similarity=0.043 Sum_probs=19.8
Q ss_pred HHHHHHHHHHh---hcceEEEEcCCCC
Q 040085 30 EMCGQVRDALE---THGFFVMYHDKIP 53 (316)
Q Consensus 30 ~~~~~l~~A~~---~~Gff~l~nhgi~ 53 (316)
++++.+.++++ +...+.|.|||+=
T Consensus 138 ela~~~~~~l~~~~~~~avll~nHGv~ 164 (193)
T TIGR03328 138 RLADSVAPYLEAYPDVPGVLIRGHGLY 164 (193)
T ss_pred HHHHHHHHHHhcCCCCCEEEEcCCcce
Confidence 77888888886 4688999999973
No 55
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=37.29 E-value=40 Score=29.19 Aligned_cols=50 Identities=18% Similarity=0.093 Sum_probs=32.2
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHH--hhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDAL--ETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~--~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||++.+.. .++. ++++++.+++ .+...+.|.|||+- -+.+++++..+..
T Consensus 130 ~ip~~~y~~----~g~~----ela~~i~~~l~~~~~~~vll~nHG~~~~G~~~~eA~~~~e~ 183 (221)
T PRK06557 130 PIPVGPFAL----IGDE----AIGKGIVETLKGGRSPAVLMQNHGVFTIGKDAEDAVKAAVM 183 (221)
T ss_pred CeeccCCcC----CCcH----HHHHHHHHHhCcCCCCEEEECCCCceEEcCCHHHHHHHHHH
Confidence 577776653 2343 6777888888 67788999999963 2234444444433
No 56
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=35.98 E-value=38 Score=22.69 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=25.2
Q ss_pred CcccccccCCCcee---EEe-------eCCCCceEEEecCCceEecc
Q 040085 186 AVGLIPHTDKNVLS---ILC-------ENNVQGLEILNKDGVYVPVG 222 (316)
Q Consensus 186 ~~~~~~HtD~~~lT---lL~-------qd~~~GLqv~~~~g~W~~V~ 222 (316)
..|.-+-||..++| +|- |--..-|||+-.||-|.+|.
T Consensus 15 snG~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGpWqdik 61 (64)
T PF06820_consen 15 SNGWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGPWQDIK 61 (64)
T ss_pred CCccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCChhhcc
Confidence 35677778855554 441 21246799998999999885
No 57
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=34.99 E-value=97 Score=24.84 Aligned_cols=40 Identities=10% Similarity=0.165 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhhcceEEEEcC-CCChHHHHHHHHHHHH
Q 040085 27 RWREMCGQVRDALETHGFFVMYHD-KIPKSLREDMFKAMNA 66 (316)
Q Consensus 27 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 66 (316)
.+...++++.+.++++.++++.++ |++...+.++....+.
T Consensus 2 ~K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 2 KKEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred chHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 356788999999999988888775 8888777766665543
No 58
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=34.80 E-value=27 Score=22.97 Aligned_cols=27 Identities=19% Similarity=0.366 Sum_probs=20.2
Q ss_pred EEecCCceEeccCCCCcEEEEhhHHHHHHh
Q 040085 211 ILNKDGVYVPVGVPDNASVVIVGDTLKAWS 240 (316)
Q Consensus 211 v~~~~g~W~~V~p~~g~~vVn~Gd~l~~~T 240 (316)
|.+.+|+++.|+..++ +.+|+..+.-.
T Consensus 10 VlT~dGeF~~ik~~~~---~~vG~eI~~~~ 36 (56)
T PF12791_consen 10 VLTPDGEFIKIKRKPG---MEVGQEIEFDE 36 (56)
T ss_pred EEcCCCcEEEEeCCCC---CcccCEEEEec
Confidence 5678999999998888 77777555433
No 59
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=34.72 E-value=2.9e+02 Score=23.55 Aligned_cols=21 Identities=19% Similarity=0.108 Sum_probs=16.2
Q ss_pred CCceeecCCCCceEEEEEeeC
Q 040085 247 PKHRVMMSGNKERYSFGSFSM 267 (316)
Q Consensus 247 ~~HRV~~~~~~~R~Si~~F~~ 267 (316)
++|+|.......|+.+.|.+.
T Consensus 160 SlH~VtPVTRg~R~asffW~q 180 (229)
T COG3128 160 SLHEVTPVTRGERFASFFWIQ 180 (229)
T ss_pred cceeccccccCceEEEeeehH
Confidence 589998777779998766554
No 60
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=33.76 E-value=44 Score=28.71 Aligned_cols=24 Identities=8% Similarity=0.253 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHh-hcceEEEEcCCC
Q 040085 29 REMCGQVRDALE-THGFFVMYHDKI 52 (316)
Q Consensus 29 ~~~~~~l~~A~~-~~Gff~l~nhgi 52 (316)
.++++.+.++++ +...+.|.|||+
T Consensus 148 ~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 148 PTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred HHHHHHHHHHhccCCcEEEECCCce
Confidence 378889999997 888899999996
No 61
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=33.74 E-value=35 Score=29.22 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=28.1
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP 53 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 53 (316)
..||++++... ..++ .+.++.+.+++.+.-.+.|.|||+-
T Consensus 121 ~~ip~~~~~~~--~~~~----~~la~~~~~~l~~~~~vll~nHG~~ 160 (209)
T cd00398 121 GDIPCTPYMTP--ETGE----DEIGTQRALGFPNSKAVLLRNHGLF 160 (209)
T ss_pred CCeeecCCcCC--CccH----HHHHHHHhcCCCcCCEEEEcCCCCe
Confidence 46898888652 1123 2566677777788889999999963
No 62
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=32.44 E-value=1.6e+02 Score=23.84 Aligned_cols=40 Identities=10% Similarity=0.181 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhhcceEEEEcC-CCChHHHHHHHHHHHH
Q 040085 27 RWREMCGQVRDALETHGFFVMYHD-KIPKSLREDMFKAMNA 66 (316)
Q Consensus 27 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 66 (316)
.+...+++|.+.+++..++++.++ |++...+.++....++
T Consensus 4 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 4 KKEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 567889999999999988777765 8888777776665553
No 63
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=31.56 E-value=75 Score=28.85 Aligned_cols=31 Identities=23% Similarity=0.461 Sum_probs=25.6
Q ss_pred HHHHHHhhcceEEEEcCCCChHHHHHHHHHHHH
Q 040085 34 QVRDALETHGFFVMYHDKIPKSLREDMFKAMNA 66 (316)
Q Consensus 34 ~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~ 66 (316)
...+++++.|||.+.| +|..++.++.+....
T Consensus 16 ~Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~~ 46 (284)
T PF03668_consen 16 TALRALEDLGYYCVDN--LPPSLLPQLIELLAQ 46 (284)
T ss_pred HHHHHHHhcCeeEEcC--CcHHHHHHHHHHHHh
Confidence 3578999999999988 788888888876653
No 64
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=31.51 E-value=66 Score=20.85 Aligned_cols=29 Identities=34% Similarity=0.520 Sum_probs=19.3
Q ss_pred ceeeCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVLDDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|+|.+.- ....+++.++++++.|.+++.+
T Consensus 1 P~i~i~~--~~grt~eqk~~l~~~i~~~l~~ 29 (58)
T cd00491 1 PFVQIYI--LEGRTDEQKRELIERVTEAVSE 29 (58)
T ss_pred CEEEEEE--cCCCCHHHHHHHHHHHHHHHHH
Confidence 5555543 2334577888888888888865
No 65
>PRK06661 hypothetical protein; Provisional
Probab=31.36 E-value=61 Score=28.37 Aligned_cols=36 Identities=3% Similarity=-0.000 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHH
Q 040085 30 EMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMN 65 (316)
Q Consensus 30 ~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~ 65 (316)
+.++.+.+++.+...+.|.|||+- -+.+++++..+.
T Consensus 138 ~~~~~~a~~l~~~~avll~nHG~v~~G~sl~eA~~~~~ 175 (231)
T PRK06661 138 KQSSRLVNDLKQNYVMLLRNHGAITCGKTIHEAMFYTY 175 (231)
T ss_pred hHHHHHHHHhCCCCEEEECCCCCeEecCCHHHHHHHHH
Confidence 567788999999999999999963 233444444333
No 66
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=29.93 E-value=78 Score=21.04 Aligned_cols=29 Identities=14% Similarity=0.357 Sum_probs=20.1
Q ss_pred ceeeCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVLDDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|+|.+.- +...+++.++++++.|.+|+.+
T Consensus 2 P~i~i~~--~~Grs~EqK~~L~~~it~a~~~ 30 (60)
T PRK02289 2 PFVRIDL--FEGRSQEQKNALAREVTEVVSR 30 (60)
T ss_pred CEEEEEE--CCCCCHHHHHHHHHHHHHHHHH
Confidence 5666653 2334677888999999888865
No 67
>PLN02433 uroporphyrinogen decarboxylase
Probab=29.59 E-value=1.3e+02 Score=27.86 Aligned_cols=47 Identities=11% Similarity=0.045 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC----hHHHHHHHHHHHHhc
Q 040085 22 DFTDERWREMCGQVRDALETHGFFVMYHDKIP----KSLREDMFKAMNALF 68 (316)
Q Consensus 22 ~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF 68 (316)
.+++++..+.+.++.+++..-||+.-.+|||+ .+.++.+.++++++-
T Consensus 288 ~gt~e~i~~~v~~~i~~~~~~g~Il~~Gc~i~~~tp~eNi~a~v~av~~~~ 338 (345)
T PLN02433 288 FGSKEAIEKEVRDVVKKAGPQGHILNLGHGVLVGTPEENVAHFFDVARELR 338 (345)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCCHHHHHHHHHHHHHhC
Confidence 46776777788888887777787777889876 578888888888853
No 68
>PRK00099 rplJ 50S ribosomal protein L10; Reviewed
Probab=29.42 E-value=1.9e+02 Score=23.85 Aligned_cols=40 Identities=10% Similarity=0.137 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhhcceEEEEcC-CCChHHHHHHHHHHHH
Q 040085 27 RWREMCGQVRDALETHGFFVMYHD-KIPKSLREDMFKAMNA 66 (316)
Q Consensus 27 ~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 66 (316)
.+.+.+++|.+.++++-+++++++ |++...+.++....+.
T Consensus 5 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 45 (172)
T PRK00099 5 EKKEIVAELAEKLKKAQSAVVADYRGLTVAQMTELRKKLRE 45 (172)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 567888899999998877777765 8888777776666554
No 69
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=28.87 E-value=2.9e+02 Score=25.40 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=31.3
Q ss_pred EeccCCCCcEEEEhhHHHHHHhCCC-CcCCCceeecCCCCceEEEEEeeCCC
Q 040085 219 VPVGVPDNASVVIVGDTLKAWSNGR-LKAPKHRVMMSGNKERYSFGSFSMPK 269 (316)
Q Consensus 219 ~~V~p~~g~~vVn~Gd~l~~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~P~ 269 (316)
+.|.|..|..|+.-= ...||. =..++|.+...-..+++++....+-.
T Consensus 206 l~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~ 253 (310)
T PLN00052 206 LAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIR 253 (310)
T ss_pred eEeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeecc
Confidence 789999997776432 112342 35678988665556899888777753
No 70
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=27.62 E-value=37 Score=23.17 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=26.3
Q ss_pred CceEEEecCCc-eEeccCCCCcEEEEhhHHHHHHhCC
Q 040085 207 QGLEILNKDGV-YVPVGVPDNASVVIVGDTLKAWSNG 242 (316)
Q Consensus 207 ~GLqv~~~~g~-W~~V~p~~g~~vVn~Gd~l~~~TnG 242 (316)
.|..++-.+|. |+.+.-.++-.++..||.+..-.++
T Consensus 16 ~~~~l~v~~G~vWlT~~g~~~D~~L~~G~~l~l~~g~ 52 (63)
T PF11142_consen 16 AGQRLRVESGRVWLTREGDPDDYWLQAGDSLRLRRGG 52 (63)
T ss_pred CCcEEEEccccEEEECCCCCCCEEECCCCEEEeCCCC
Confidence 34444445777 9999998999999999877655443
No 71
>PRK00819 RNA 2'-phosphotransferase; Reviewed
Probab=27.42 E-value=24 Score=29.72 Aligned_cols=52 Identities=17% Similarity=0.327 Sum_probs=33.8
Q ss_pred CCceEEEecCCceEeccCCCCcEEEEhhHHHHHHh---CCCCcCCCceeecCCCCceEEEE-EeeCCCC
Q 040085 206 VQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWS---NGRLKAPKHRVMMSGNKERYSFG-SFSMPKE 270 (316)
Q Consensus 206 ~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~T---nG~~ks~~HRV~~~~~~~R~Si~-~F~~P~~ 270 (316)
.-||++ +.+| |++|. |.++... .+.=+..+++||....+.||++- ...+.+.
T Consensus 23 ~~GL~l-d~~G-~v~v~-----------~Ll~~~~~~~~~~t~~~l~~vV~~d~K~Rf~l~~~~IRA~q 78 (179)
T PRK00819 23 AIGLTL-DEEG-WVDID-----------ALIEALAKAYKWVTRELLEAVVESDDKGRFEISGDRIRARQ 78 (179)
T ss_pred HcCCcc-CCCC-CEEHH-----------HHHHHHHHccCCCCHHHHHHHHHcCCCcceEecCceEEecc
Confidence 478988 6777 98886 4555442 22234557888888788999985 3333433
No 72
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=26.91 E-value=54 Score=23.47 Aligned_cols=21 Identities=10% Similarity=0.104 Sum_probs=17.2
Q ss_pred HHHHHHHhhcceEEEEcCCCC
Q 040085 33 GQVRDALETHGFFVMYHDKIP 53 (316)
Q Consensus 33 ~~l~~A~~~~Gff~l~nhgi~ 53 (316)
+.|..-|-+.||+|+.-|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 458889999999999877554
No 73
>PF08823 PG_binding_2: Putative peptidoglycan binding domain; InterPro: IPR014927 This entry may be a peptidoglycan binding domain.
Probab=26.56 E-value=99 Score=21.89 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHH
Q 040085 29 REMCGQVRDALETHGFFVMYHDKIPKSLREDMFK 62 (316)
Q Consensus 29 ~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~ 62 (316)
.++++.|.++++..||..=..||.-.+..++++.
T Consensus 15 ~~~~~evq~~L~~lGyy~g~~~g~~d~a~~~Al~ 48 (74)
T PF08823_consen 15 GDVAREVQEALKRLGYYKGEADGVWDEATEDALR 48 (74)
T ss_pred HHHHHHHHHHHHHcCCccCCCCCcccHHHHHHHH
Confidence 3788999999999999887788877665555554
No 74
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=26.36 E-value=1.6e+02 Score=26.44 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCC
Q 040085 30 EMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDL 70 (316)
Q Consensus 30 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 70 (316)
+..++|.+|+.++|++.+.|..++. ++..+.++.|-.+
T Consensus 28 ~~~~~l~~~l~~~Gvlvfr~q~l~~---~~~~~~~~~~G~~ 65 (277)
T PRK09553 28 NQFEQLYHALLRHQVLFFRDQPITP---QQQRDLAARFGDL 65 (277)
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhCCC
Confidence 5678899999999999999988875 4555666676554
No 75
>PRK00115 hemE uroporphyrinogen decarboxylase; Validated
Probab=26.05 E-value=1.7e+02 Score=27.19 Aligned_cols=45 Identities=16% Similarity=0.088 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHHHHHhhcceEEEEcCCCC----hHHHHHHHHHHHHh
Q 040085 23 FTDERWREMCGQVRDALETHGFFVMYHDKIP----KSLREDMFKAMNAL 67 (316)
Q Consensus 23 ~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~f 67 (316)
+++++..+.+.++.+.+..-||+.-.+|||+ .+-++.+.+++++|
T Consensus 296 gt~e~i~~~~~~~i~~~~~~gfIl~~Gc~i~~~tp~eNi~a~v~a~~~y 344 (346)
T PRK00115 296 APPEAIEEEVRAILDGGGGPGHIFNLGHGILPETPPENVKALVEAVHEL 344 (346)
T ss_pred CCHHHHHHHHHHHHHHhCCCCeeeecCCcCCCCcCHHHHHHHHHHHHHh
Confidence 4576777777888877777788877889875 57888888888874
No 76
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=24.46 E-value=79 Score=20.79 Aligned_cols=29 Identities=28% Similarity=0.409 Sum_probs=18.2
Q ss_pred ceeeCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVLDDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|+|.+.- ....+.+.+++++++|.+++.+
T Consensus 1 P~I~i~~--~~g~~~e~K~~l~~~it~~~~~ 29 (60)
T PF01361_consen 1 PFITIKI--PEGRTAEQKRELAEAITDAVVE 29 (60)
T ss_dssp -EEEEEE--ESTS-HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE--CCCCCHHHHHHHHHHHHHHHHH
Confidence 5566553 2233566788888888888866
No 77
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=24.38 E-value=89 Score=20.20 Aligned_cols=42 Identities=19% Similarity=0.204 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCC
Q 040085 30 EMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLP 71 (316)
Q Consensus 30 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP 71 (316)
+.+..|...+...||......|+-.....++...-+..+.||
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 356788999999998855455666666666666666666665
No 78
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=23.98 E-value=1.1e+02 Score=20.01 Aligned_cols=29 Identities=17% Similarity=0.418 Sum_probs=19.9
Q ss_pred ceeeCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVLDDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|+|.+.- +...+++.++++++.|.+++.+
T Consensus 2 P~i~i~~--~~Grs~eqk~~l~~~it~~l~~ 30 (61)
T PRK02220 2 PYVHIKL--IEGRTEEQLKALVKDVTAAVSK 30 (61)
T ss_pred CEEEEEE--cCCCCHHHHHHHHHHHHHHHHH
Confidence 6666653 2334677888888888888764
No 79
>KOG2107 consensus Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=23.92 E-value=85 Score=25.98 Aligned_cols=39 Identities=15% Similarity=0.246 Sum_probs=29.7
Q ss_pred CCCceEEEecCCceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCC
Q 040085 205 NVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSG 255 (316)
Q Consensus 205 ~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~ 255 (316)
+.+=+-|++++++||.|....|-+||.-. ...||-...+
T Consensus 102 GtgYfDVrd~dd~WIRi~vekGDlivlPa------------GiyHRFTtt~ 140 (179)
T KOG2107|consen 102 GTGYFDVRDKDDQWIRIFVEKGDLIVLPA------------GIYHRFTTTP 140 (179)
T ss_pred cceEEeeccCCCCEEEEEEecCCEEEecC------------cceeeeecCc
Confidence 55668899999999999999998887543 2467776554
No 80
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=23.80 E-value=1.3e+02 Score=23.21 Aligned_cols=37 Identities=5% Similarity=0.023 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhcceEEEEcC-CCChHHHHHHHHHHHH
Q 040085 30 EMCGQVRDALETHGFFVMYHD-KIPKSLREDMFKAMNA 66 (316)
Q Consensus 30 ~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 66 (316)
+.+....+.|.+.|.=.+++. |.+++.++.+.++++.
T Consensus 78 ~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 78 DAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp HHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred HHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 566677777777798888865 8988888877776654
No 81
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=23.53 E-value=1.6e+02 Score=24.21 Aligned_cols=40 Identities=10% Similarity=0.287 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhhcceEEEE-cCCCChHHHHHHHHHHHH
Q 040085 27 RWREMCGQVRDALETHGFFVMY-HDKIPKSLREDMFKAMNA 66 (316)
Q Consensus 27 ~~~~~~~~l~~A~~~~Gff~l~-nhgi~~~~~~~~~~~~~~ 66 (316)
.+.+.+++|.+.+.++-.++|+ .+|++...++++.+..+.
T Consensus 2 ~K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 2 LKQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred hHHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 4568899999999998877776 469998888877776543
No 82
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=23.52 E-value=2.1e+02 Score=27.48 Aligned_cols=57 Identities=18% Similarity=0.300 Sum_probs=44.8
Q ss_pred eeeCCCCCCCCCCHHHHHHHHHHHHHH------------HhhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 040085 12 FLDFSGEVLDDFTDERWREMCGQVRDA------------LETHGFFVMYHDKIPKSLREDMFKAMNALFD 69 (316)
Q Consensus 12 vIDl~~~~l~~~~~~~~~~~~~~l~~A------------~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 69 (316)
-+|++.+ |.+.+-++-.++-++|.++ |.+-|.|.+.-....+++++-+++..+.|-.
T Consensus 392 wvDlr~l-L~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 392 WVDLRKL-LTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred EEEhHHh-cCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 4788886 6666655556777888877 8999999999999999888877777777754
No 83
>PRK05834 hypothetical protein; Provisional
Probab=23.43 E-value=1.2e+02 Score=25.84 Aligned_cols=36 Identities=11% Similarity=0.060 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhcc--eEEEEcCCCC--hHHHHHHHHHHH
Q 040085 30 EMCGQVRDALETHG--FFVMYHDKIP--KSLREDMFKAMN 65 (316)
Q Consensus 30 ~~~~~l~~A~~~~G--ff~l~nhgi~--~~~~~~~~~~~~ 65 (316)
..++.+.+++.+.. .+.|.|||+= -+.+++++..+.
T Consensus 136 ~la~~v~~~l~~~~~~avLL~nHGvv~~G~~l~eA~~~~e 175 (194)
T PRK05834 136 RADTEILRYLQEKNKNFVVIKGYGVYAYARDIYELAKKIA 175 (194)
T ss_pred hHHHHHHHHHhhcCCCEEEEcCCcceEECCCHHHHHHHHH
Confidence 45677888888754 8999999963 233444444443
No 84
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=23.14 E-value=1.1e+02 Score=20.14 Aligned_cols=29 Identities=31% Similarity=0.494 Sum_probs=17.8
Q ss_pred ceeeCCCCCC-CCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVL-DDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l-~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|+|.+.- + ...+.+.++++++.|.+++.+
T Consensus 1 P~i~i~i--~~~grt~eqK~~l~~~it~~l~~ 30 (63)
T TIGR00013 1 PFVNIYI--LKEGRTDEQKRQLIEGVTEAMAE 30 (63)
T ss_pred CEEEEEE--CCCCCCHHHHHHHHHHHHHHHHH
Confidence 5555543 2 233566777777777777754
No 85
>COG0244 RplJ Ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=22.56 E-value=2.8e+02 Score=23.09 Aligned_cols=41 Identities=10% Similarity=0.210 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhhcceEEEEc-CCCChHHHHHHHHHHHH
Q 040085 26 ERWREMCGQVRDALETHGFFVMYH-DKIPKSLREDMFKAMNA 66 (316)
Q Consensus 26 ~~~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 66 (316)
+.+.+.+++|.+.+++...|.+++ +|++...+.++....++
T Consensus 6 e~K~~~v~el~e~~~~s~~~~i~dy~Gl~~~ql~~lR~~lr~ 47 (175)
T COG0244 6 EWKKELVAELKELIKESPSVVIVDYRGLTVAQLTELRKKLRE 47 (175)
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEEeCCCcHHHHHHHHHHHHh
Confidence 367889999999999987666665 59998888877776665
No 86
>PF00466 Ribosomal_L10: Ribosomal protein L10; InterPro: IPR001790 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. On the basis of sequence similarities the following prokaryotic and eukaryotic ribosomal proteins can be grouped: Bacterial 50S ribosomal protein L10; Archaebacterial acidic ribosomal protein P0 homologue (L10E); Eukaryotic 60S ribosomal protein P0 (L10E). This entry represents the ribosomal protein L10P family, with includes the above mentioned ribosomal proteins.; GO: 0042254 ribosome biogenesis, 0005622 intracellular; PDB: 3A1Y_G 3D5D_J 3PYT_I 3PYV_I 3D5B_J 3PYO_I 3PYR_I 3MS1_I 3MRZ_I 1VQ9_G ....
Probab=21.99 E-value=3.2e+02 Score=19.91 Aligned_cols=42 Identities=10% Similarity=0.271 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcceEEE-EcCCCChHHHHHHHHHHHHh
Q 040085 26 ERWREMCGQVRDALETHGFFVM-YHDKIPKSLREDMFKAMNAL 67 (316)
Q Consensus 26 ~~~~~~~~~l~~A~~~~Gff~l-~nhgi~~~~~~~~~~~~~~f 67 (316)
+.+...+++|.+.+.++=.+++ ..+|++...+.++....+..
T Consensus 4 ~~K~~~v~~~~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~~ 46 (100)
T PF00466_consen 4 EKKEEIVEELKELLKKSKYVIVVDYNGLSANQLQELRKELRKK 46 (100)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 3678899999999999855555 45699988877777766654
No 87
>cd05795 Ribosomal_P0_L10e Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-interacting protein (WIP). These eukaryotic and archaeal P0 sequences have an additional C-terminal domain homologous with acidic proteins P1 and P2.
Probab=21.95 E-value=1.9e+02 Score=23.97 Aligned_cols=40 Identities=8% Similarity=0.172 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhhcceEEEEc-CCCChHHHHHHHHHHHH
Q 040085 27 RWREMCGQVRDALETHGFFVMYH-DKIPKSLREDMFKAMNA 66 (316)
Q Consensus 27 ~~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 66 (316)
.+.+.+++|.+.+.++..++|++ .|++...++++.+..++
T Consensus 2 ~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 42 (175)
T cd05795 2 WKKEYVEKLTELLKSYPKVLIVDADNVGSKQLQKIRRSLRG 42 (175)
T ss_pred hHHHHHHHHHHHHHhCCEEEEEEecCCChHHHHHHHHHhhC
Confidence 45688999999999998777775 58998888777766553
No 88
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=21.69 E-value=2.3e+02 Score=25.43 Aligned_cols=37 Identities=14% Similarity=0.030 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhhcceEEEEcC-CCChHHHHHHHHHHHH
Q 040085 30 EMCGQVRDALETHGFFVMYHD-KIPKSLREDMFKAMNA 66 (316)
Q Consensus 30 ~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 66 (316)
+...++.+-|.+.|.-.|++. |.+++.++.+.++++.
T Consensus 80 ~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 80 EATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred hhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 556778888889998777775 9999999888888876
No 89
>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]
Probab=21.62 E-value=2.4e+02 Score=24.40 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=39.8
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhc---ceEEEEcCCC-----ChHHHHHHHHHHHHhcCCCHHHHh
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETH---GFFVMYHDKI-----PKSLREDMFKAMNALFDLPEETKS 76 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~---Gff~l~nhgi-----~~~~~~~~~~~~~~fF~lP~e~K~ 76 (316)
..||+|+=.+. -.++.+.|.+|+..+ =.+.|.|||| ..+....+-++-.-+|++..+-|+
T Consensus 155 L~vPIIeNt~~---------E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~k 222 (238)
T KOG2631|consen 155 LVVPIIENTPS---------ESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKK 222 (238)
T ss_pred EEEeeecCCch---------HHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45888876541 135667888888876 3567779987 345556666677777887655553
No 90
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=21.48 E-value=1.4e+02 Score=19.70 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=19.4
Q ss_pred ceeeCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVLDDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|+|.+.- ....+.+.++++++.|.+++.+
T Consensus 2 P~i~I~~--~~grs~eqk~~l~~~it~~l~~ 30 (62)
T PRK00745 2 PTFHIEL--FEGRTVEQKRKLVEEITRVTVE 30 (62)
T ss_pred CEEEEEE--cCCCCHHHHHHHHHHHHHHHHH
Confidence 6666653 2334677888888888887754
No 91
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=21.04 E-value=4.8e+02 Score=21.57 Aligned_cols=58 Identities=14% Similarity=0.174 Sum_probs=34.6
Q ss_pred eeeccccCCCCCCCCcccccccCCCcee---EE--eeCCCCc-eEEE--ecCCceEeccCCCCcEEEEhhHH
Q 040085 172 FRLMKYKVPPNNESAVGLIPHTDKNVLS---IL--CENNVQG-LEIL--NKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 172 lr~~~Yp~~~~~~~~~~~~~HtD~~~lT---lL--~qd~~~G-Lqv~--~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
.=+|+|++- -++++|.|-.-+. .+ ++=+.+. +.+. .+++....+...+|.++|.-|+.
T Consensus 97 ~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 97 CLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred EEEEeecCC------CccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 447899754 3799999952221 11 1111122 2221 13455889999999999998873
No 92
>COG3695 Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]
Probab=20.59 E-value=65 Score=24.35 Aligned_cols=28 Identities=43% Similarity=0.486 Sum_probs=19.1
Q ss_pred EhhHHHHHHhCCCCcCCCceeecCCCCceEE
Q 040085 231 IVGDTLKAWSNGRLKAPKHRVMMSGNKERYS 261 (316)
Q Consensus 231 n~Gd~l~~~TnG~~ks~~HRV~~~~~~~R~S 261 (316)
.+|-+|..++.|.. =++|||++.. .|.|
T Consensus 41 qVG~il~~l~~~s~-lPWhRVvns~--G~is 68 (103)
T COG3695 41 QVGRILKHLPEGSD-LPWHRVVNSD--GRIS 68 (103)
T ss_pred HHHHHHhhCCCCCC-CChhheecCC--Cccc
Confidence 46777777777654 3799999864 3444
No 93
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=20.34 E-value=1.4e+02 Score=25.98 Aligned_cols=24 Identities=8% Similarity=-0.049 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhhc-------ceEEEEcCCCC
Q 040085 30 EMCGQVRDALETH-------GFFVMYHDKIP 53 (316)
Q Consensus 30 ~~~~~l~~A~~~~-------Gff~l~nhgi~ 53 (316)
+.++.+.+++++. ..+.|.|||+-
T Consensus 143 ~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v 173 (231)
T PRK08193 143 ETGKVIVETFEKRGIDPAAVPGVLVHSHGPF 173 (231)
T ss_pred hHHHHHHHHHhhccCCcccCCEEEEcCCCce
Confidence 6777888888764 47899999963
No 94
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=20.20 E-value=1.1e+02 Score=26.24 Aligned_cols=38 Identities=5% Similarity=0.088 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhcc---eEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 29 REMCGQVRDALETHG---FFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 29 ~~~~~~l~~A~~~~G---ff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
+++++.+.+++++.. .+.|.|||+= -+.+++++..+..
T Consensus 145 ~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~ 187 (204)
T PRK09220 145 ARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEG 187 (204)
T ss_pred HHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHHH
Confidence 478888999998864 8999999963 2334445544443
No 95
>PRK07044 aldolase II superfamily protein; Provisional
Probab=20.19 E-value=1.5e+02 Score=26.31 Aligned_cols=51 Identities=10% Similarity=0.177 Sum_probs=31.0
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||++++..+ . .+. +.++.+.+++.+...+.|.|||+- .+.+++++..+..
T Consensus 138 ~i~~~~y~~~--~-~~~----e~~~~va~~l~~~~avLL~nHGvi~~G~~l~eA~~~~e~ 190 (252)
T PRK07044 138 RLAYHDYEGI--A-LDL----DEGERLVADLGDKPAMLLRNHGLLTVGRTVAEAFLLMYT 190 (252)
T ss_pred CceeeCCCCC--c-CCH----HHHHHHHHHhccCCEEEECCCCceEecCCHHHHHHHHHH
Confidence 4677766431 1 122 456777888888889999999963 2334444444433
No 96
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=20.06 E-value=1.8e+02 Score=18.48 Aligned_cols=28 Identities=25% Similarity=0.399 Sum_probs=20.9
Q ss_pred HHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHH
Q 040085 31 MCGQVRDALETHGFFVMYHDKIPKSLREDMFKAM 64 (316)
Q Consensus 31 ~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~ 64 (316)
.++.+.+++++.||. |++++++.+++.+
T Consensus 20 ~~~~~l~~l~~~g~~------is~~l~~~~L~~~ 47 (48)
T PF11848_consen 20 EVKPLLDRLQQAGFR------ISPKLIEEILRRA 47 (48)
T ss_pred hHHHHHHHHHHcCcc------cCHHHHHHHHHHc
Confidence 455667778888987 7888888887654
Done!