Query 040085
Match_columns 316
No_of_seqs 216 out of 1215
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 07:27:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.7E-79 1.6E-83 559.0 28.5 291 7-304 4-308 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 7.6E-77 2.6E-81 552.9 30.7 287 8-304 45-344 (356)
3 1odm_A Isopenicillin N synthas 100.0 4.1E-76 1.4E-80 543.5 32.3 291 1-304 1-323 (331)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 3.9E-76 1.4E-80 540.2 19.8 284 8-308 2-296 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 1.1E-72 3.8E-77 516.1 18.2 269 7-304 2-304 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 3.7E-69 1.3E-73 485.7 26.3 253 8-304 2-276 (280)
7 3dkq_A PKHD-type hydroxylase S 95.1 0.042 1.4E-06 47.5 6.8 79 170-267 99-194 (243)
8 2rg4_A Uncharacterized protein 94.3 1.1 3.6E-05 37.8 13.4 43 216-270 166-209 (216)
9 3itq_A Prolyl 4-hydroxylase, a 88.5 1.6 5.6E-05 36.6 8.0 84 171-267 112-211 (216)
10 2hbt_A EGL nine homolog 1; pro 86.5 1.4 4.8E-05 37.9 6.5 80 172-267 119-212 (247)
11 2jig_A Prolyl-4 hydroxylase; h 86.0 1.9 6.4E-05 36.2 7.0 47 218-268 170-217 (224)
12 3tht_A Alkylated DNA repair pr 84.8 1.3 4.3E-05 40.2 5.6 93 171-270 199-315 (345)
13 2iuw_A Alkylated repair protei 84.4 3 0.0001 35.5 7.6 85 171-267 127-229 (238)
14 3s57_A Alpha-ketoglutarate-dep 77.6 6.3 0.00021 32.6 7.0 80 172-265 102-200 (204)
15 3i3q_A Alpha-ketoglutarate-dep 65.2 18 0.00061 30.1 7.0 79 172-266 107-201 (211)
16 2dbn_A Hypothetical protein YB 56.7 5.1 0.00017 37.4 2.3 54 7-69 98-151 (461)
17 4ay7_A Methylcobalamin\: coenz 54.4 33 0.0011 30.5 7.4 47 20-69 298-348 (348)
18 2opi_A L-fuculose-1-phosphate 52.2 8.8 0.0003 31.8 3.0 36 9-52 125-160 (212)
19 1e4c_P L-fuculose 1-phosphate 46.8 12 0.0004 31.1 2.9 36 9-52 122-157 (215)
20 1m5a_B Insulin B chain; alpha 46.7 22 0.00075 19.7 2.9 18 30-47 10-27 (30)
21 2fk5_A Fuculose-1-phosphate al 42.7 16 0.00055 29.9 3.1 51 9-67 117-176 (200)
22 1pvt_A Sugar-phosphate aldolas 42.4 18 0.0006 30.5 3.3 51 8-66 160-212 (238)
23 3o2g_A Gamma-butyrobetaine dio 39.3 12 0.00042 34.1 2.0 52 9-70 122-173 (388)
24 2v9l_A Rhamnulose-1-phosphate 37.7 17 0.00058 31.4 2.6 50 9-66 179-230 (274)
25 1otj_A Alpha-ketoglutarate-dep 35.8 34 0.0012 29.3 4.2 49 9-68 17-65 (283)
26 1zav_A 50S ribosomal protein L 34.8 93 0.0032 24.8 6.4 41 26-66 6-47 (180)
27 2irp_A Putative aldolase class 33.6 17 0.00059 29.8 1.8 49 9-66 139-192 (208)
28 2j01_J 50S ribosomal protein L 33.2 95 0.0032 24.6 6.2 39 27-65 5-45 (173)
29 3ocr_A Class II aldolase/adduc 30.1 32 0.0011 29.7 3.0 52 8-66 155-208 (273)
30 1e5r_A Proline oxidase; oxidor 28.3 66 0.0022 28.1 4.7 63 188-266 103-175 (290)
31 1oih_A Putative alkylsulfatase 27.0 56 0.0019 28.2 4.1 37 30-69 40-77 (301)
32 1otf_A 4-oxalocrotonate tautom 25.5 53 0.0018 20.5 2.8 29 11-41 1-29 (62)
33 2p17_A Pirin-like protein; GK1 24.8 25 0.00086 30.5 1.4 21 183-203 48-68 (277)
34 2opa_A Probable tautomerase YW 24.2 58 0.002 20.2 2.8 29 11-41 1-29 (61)
35 2z7b_A MLR6791 protein; class 24.0 42 0.0014 28.9 2.6 54 9-66 157-217 (270)
36 3jsy_A Acidic ribosomal protei 23.6 1.5E+02 0.005 24.4 5.9 41 26-66 3-44 (213)
37 3pvj_A Alpha-ketoglutarate-dep 20.6 78 0.0027 27.1 3.7 50 9-69 15-64 (277)
38 4exq_A UPD, URO-D, uroporphyri 20.3 2.1E+02 0.0071 25.5 6.7 45 23-67 309-358 (368)
39 2rdq_A 1-deoxypentalenic acid 20.3 1E+02 0.0035 26.0 4.5 35 33-68 22-56 (288)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.7e-79 Score=559.02 Aligned_cols=291 Identities=21% Similarity=0.350 Sum_probs=259.1
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYR 85 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~ 85 (316)
..+||||||+.+ .+ .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++
T Consensus 4 ~~~iPvIDls~~--~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~ 77 (312)
T 3oox_A 4 TSAIDPVSFSLY--AK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGAR 77 (312)
T ss_dssp CCSSCCEETHHH--HH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTS
T ss_pred CCCCCeEEChHh--cc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcc
Confidence 568999999974 21 3568999999999999999999999999999999999999999999999999863 4678
Q ss_pred CCCCCCC-------CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 040085 86 SYMGESP-------AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG 158 (316)
Q Consensus 86 GY~~~~~-------~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 158 (316)
||.+.+. ..|++|.|.++.+.... ......+.+|.||+.+|+||+.+++|+++|.+++..|+++|+++||++
T Consensus 78 Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~-~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 156 (312)
T 3oox_A 78 GYIPFGVETAKGADHYDLKEFWHMGRDLPPG-HRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE 156 (312)
T ss_dssp EEECCCCCCSTTSCSCCCCEEEEECCCCCTT-CGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred ccccccceecCCCCCCCceeeeEeecCCCcC-CcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9976543 24899999987633221 112234567899999999999999999999999999999999999999
Q ss_pred -cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHH
Q 040085 159 -KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLK 237 (316)
Q Consensus 159 -~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~ 237 (316)
++|.+.+..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++|||+||+||
T Consensus 157 ~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 236 (312)
T 3oox_A 157 RDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE 236 (312)
T ss_dssp TTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred HHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence 8998888888899999999998875555999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCcCCCceeecCC----CCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCC-CcCHHHHHHHHHhc
Q 040085 238 AWSNGRLKAPKHRVMMSG----NKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYR-PFKFSEFMAYFVNN 304 (316)
Q Consensus 238 ~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~-~~t~~e~~~~~~~~ 304 (316)
+||||+||||+|||+.++ ..+|||++||++|+.|++|.|+++++++++|++|+ ++|++||++.+++.
T Consensus 237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 999999999999998764 46799999999999999999999999999999999 99999999999875
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=7.6e-77 Score=552.93 Aligned_cols=287 Identities=21% Similarity=0.331 Sum_probs=261.1
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC---CCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS---KPY 84 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~---~~~ 84 (316)
.+||||||+. +.+++++.|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+
T Consensus 45 ~~iPvIDls~--l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~ 122 (356)
T 1gp6_A 45 PQVPTIDLKN--IESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 122 (356)
T ss_dssp CCCCEEECTT--TTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBC
T ss_pred CCCCEEEchh--ccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCc
Confidence 3699999998 45667767889999999999999999999999999999999999999999999999999764 357
Q ss_pred CCCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 040085 85 RSYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG- 158 (316)
Q Consensus 85 ~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~- 158 (316)
+||..... ..|++|.|.++.. +. ....+|.||+.+++||+.+++|++.|.+|+..||++|+++||++
T Consensus 123 ~Gy~~~~~~~~~~~~d~kE~~~~~~~--p~-----~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 195 (356)
T 1gp6_A 123 QGYGSKLANNASGQLEWEDYFFHLAY--PE-----EKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEP 195 (356)
T ss_dssp SEEECCCCCSTTCCCCSCEEEEEEEE--SG-----GGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred cccCcCcccCCCCCCChhheeeeecC--Cc-----cccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 89976542 3589999988752 11 11356789999999999999999999999999999999999999
Q ss_pred cchhhhcc---CccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHH
Q 040085 159 KLYVPHIQ---GSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 159 ~~f~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
++|.+.+. .+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+
T Consensus 196 ~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~ 274 (356)
T 1gp6_A 196 DRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDT 274 (356)
T ss_dssp THHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHH
T ss_pred HHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEe-cCCcEEECcCCCCeEEEEeccH
Confidence 88988876 4678999999999998888899999999999999999999999997 6999999999999999999999
Q ss_pred HHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCC-eeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 236 LKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGV-ATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 236 l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
||+||||+|||++|||+.++..+|||++||++|+.|+ +|.|+++++++++|++|+++|++||++.+++.
T Consensus 275 l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~ 344 (356)
T 1gp6_A 275 LEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFG 344 (356)
T ss_dssp HHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred HHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHh
Confidence 9999999999999999998888999999999999999 99999999999999999999999999998876
No 3
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.1e-76 Score=543.46 Aligned_cols=291 Identities=19% Similarity=0.276 Sum_probs=257.9
Q ss_pred CCCCCCCCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHh-cCCCHHHHhhhc
Q 040085 1 MGTDEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNAL-FDLPEETKSKYA 79 (316)
Q Consensus 1 m~s~~~~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lP~e~K~~~~ 79 (316)
|||.+ ..+||||||+. +.++++++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.
T Consensus 1 m~s~~-~~~iPvIDls~--l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~ 74 (331)
T 1odm_A 1 MGSVS-KANVPKIDVSP--LFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLA 74 (331)
T ss_dssp --CCC-BCCCCEEECGG--GGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHB
T ss_pred CCccc-CCCCCEEEchH--hcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhh
Confidence 89887 78999999998 455677788999999999999999999999999 999999999999 999999999997
Q ss_pred CCCCCCCCCCCCC-------------CCCcceeeecCCCCCCCCchhh---hhccCCCCCCC--CchHHHHHHHHHHHHH
Q 040085 80 SSKPYRSYMGESP-------------AVPLHQSFGIDNEPGIDVDTTA---QAFTNLMWPQG--NPSFCETLKSVTSKML 141 (316)
Q Consensus 80 ~~~~~~GY~~~~~-------------~~d~~E~~~~~~~~~~~~~~~~---~~~~~~~wP~~--~~~fr~~~~~y~~~~~ 141 (316)
. +||.+.+. ..|++|+|.++.+...+.+... ....+|.||+. +|+||+.+++|+++|.
T Consensus 75 ~----~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~ 150 (331)
T 1odm_A 75 I----RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVF 150 (331)
T ss_dssp C----TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHH
T ss_pred h----cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 5 68876542 3489999999864322221111 12347899998 9999999999999999
Q ss_pred HHHHHHHHHHHHhcCCC-cchhhhccCccceee--ecccc------C---CCCCCC-CcccccccCCCceeEEeeCCCCc
Q 040085 142 ELNYTILKMVFESFGTG-KLYVPHIQGSITLFR--LMKYK------V---PPNNES-AVGLIPHTDKNVLSILCENNVQG 208 (316)
Q Consensus 142 ~l~~~ll~~l~~~Lgl~-~~f~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~HtD~~~lTlL~qd~~~G 208 (316)
+++..|+++|+++||++ ++|.+.+..+.+.|| ++||| | |++++. .+|+++|||+|+||||+||+++|
T Consensus 151 ~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~G 230 (331)
T 1odm_A 151 GLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQN 230 (331)
T ss_dssp HHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCC
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCC
Confidence 99999999999999999 899988888889999 99999 7 666665 89999999999999999999999
Q ss_pred eEEEecCCceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCC
Q 040085 209 LEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLV 288 (316)
Q Consensus 209 Lqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~ 288 (316)
|||++++| |++|+|+||++|||+||+||+||||+|||++|||+.+ ..+|||++||++|+.|++|.|+++++++++ ++
T Consensus 231 LQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~ 307 (331)
T 1odm_A 231 LQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SD 307 (331)
T ss_dssp EEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CS
T ss_pred EEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cC
Confidence 99998999 9999999999999999999999999999999999965 679999999999999999999999998888 89
Q ss_pred CCCcCHHHHHHHHHhc
Q 040085 289 YRPFKFSEFMAYFVNN 304 (316)
Q Consensus 289 y~~~t~~e~~~~~~~~ 304 (316)
|+++|++||++.+++.
T Consensus 308 y~~~t~~e~l~~~~~~ 323 (331)
T 1odm_A 308 REPLSYGDYLQNGLVS 323 (331)
T ss_dssp SCCCBHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHH
Confidence 9999999999998876
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=3.9e-76 Score=540.16 Aligned_cols=284 Identities=21% Similarity=0.339 Sum_probs=248.3
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRSY 87 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~GY 87 (316)
.+||||||+.+ .+ +++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... .+||
T Consensus 2 ~~iPvIDls~l--~~---~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy 74 (319)
T 1w9y_A 2 ENFPIISLDKV--NG---VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKAL 74 (319)
T ss_dssp CCCCEEEGGGG--GS---TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
T ss_pred CCCCEEECccc--Cc---ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCC
Confidence 46999999984 32 24678999999999999999999999999999999999999999999999998633 2477
Q ss_pred CCCCC---CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchhh
Q 040085 88 MGESP---AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KLYVP 163 (316)
Q Consensus 88 ~~~~~---~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~f~~ 163 (316)
.+.+. ..|++|.|.++.. +. ..+|.||+.+|+||+.+++|++.|.+++..|+++|+++||++ ++|.+
T Consensus 75 ~~~~~e~~~~d~ke~~~~~~~--p~-------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 145 (319)
T 1w9y_A 75 EGVQAEVTDMDWESTFFLKHL--PI-------SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKN 145 (319)
T ss_dssp TTCCCCGGGCCCCEEEEEEEE--SC-------CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred CcccccCCCCChhhheeeecC--Cc-------ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 65433 3589999988641 11 125689999999999999999999999999999999999999 88988
Q ss_pred hcc---CccceeeeccccCCCCCCCCcccccccCCCceeEEeeC-CCCceEEEecCCceEeccCCCCcEEEEhhHHHHHH
Q 040085 164 HIQ---GSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCEN-NVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAW 239 (316)
Q Consensus 164 ~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~ 239 (316)
.+. .+.+.||++|||||+.++...|+++|||+|+||||+|| +++||||+ ++|+|++|+|.||++|||+||+||+|
T Consensus 146 ~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~ 224 (319)
T 1w9y_A 146 AFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVI 224 (319)
T ss_dssp HHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred HhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEe-eCCeEEEcccCCCcEEEEhHHHHHHH
Confidence 775 25678999999999988778999999999999999995 79999995 79999999999999999999999999
Q ss_pred hCCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCC---CCCCCCCcCHHHHHHHHHhccccc
Q 040085 240 SNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDD---HPLVYRPFKFSEFMAYFVNNISDD 308 (316)
Q Consensus 240 TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~---~~~~y~~~t~~e~~~~~~~~~~~~ 308 (316)
|||+|||++|||+.++..+|||++||++|+.|++|.|++++++++ +|++|+++|++||++.+++.++.+
T Consensus 225 SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~ 296 (319)
T 1w9y_A 225 TNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQA 296 (319)
T ss_dssp TTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSS
T ss_pred hCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCc
Confidence 999999999999999888999999999999999999999999987 599999999999999988774433
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.1e-72 Score=516.10 Aligned_cols=269 Identities=15% Similarity=0.259 Sum_probs=233.5
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCC-HHHHhhhcCC--CC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLP-EETKSKYASS--KP 83 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP-~e~K~~~~~~--~~ 83 (316)
..+||||||+.+ .+++. .++|.+||++||||||+|||||.++++++++++++||+|| .|+|+++... ..
T Consensus 2 ~~~iPvIDls~l--~~~~~------~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~ 73 (311)
T 1dcs_A 2 DTTVPTFSLAEL--QQGLH------QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTM 73 (311)
T ss_dssp CCCCCEEEHHHH--HTTCS------HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCS
T ss_pred CCCCcEEEchhh--cCCCH------HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCC
Confidence 467999999974 33333 1289999999999999999999999999999999999999 9999999865 46
Q ss_pred CCCCCCCCC-----------CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040085 84 YRSYMGESP-----------AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVF 152 (316)
Q Consensus 84 ~~GY~~~~~-----------~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~ 152 (316)
++||.+.+. ..|++|.|.++.. +|.|| +|+||+.+++|++.|.+++..|+++|+
T Consensus 74 ~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~-------------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la 138 (311)
T 1dcs_A 74 RRGFTGLESESTAQITNTGSYSDYSMCYSMGTA-------------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVL 138 (311)
T ss_dssp SSEEEEC-----------------CEEEEECSS-------------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeeccccccccccCCCCCCCcceeeeccCC-------------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799986542 3478999998861 57899 899999999999999999999999999
Q ss_pred HhcCC----C-cchhhhccCccceeeeccccCCCCCC--C--CcccccccCCCceeEEeeC-CCCc---eEEEecCCceE
Q 040085 153 ESFGT----G-KLYVPHIQGSITLFRLMKYKVPPNNE--S--AVGLIPHTDKNVLSILCEN-NVQG---LEILNKDGVYV 219 (316)
Q Consensus 153 ~~Lgl----~-~~f~~~~~~~~~~lr~~~Yp~~~~~~--~--~~~~~~HtD~~~lTlL~qd-~~~G---Lqv~~~~g~W~ 219 (316)
++||+ + ++|.+. .+.||++||||++.++ . .+|+++|||+|+||||+|| +++| |||++ +|+|+
T Consensus 139 ~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g~W~ 213 (311)
T 1dcs_A 139 RATGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GGAFT 213 (311)
T ss_dssp HHTTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TTEEE
T ss_pred HHcCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CCEEE
Confidence 99999 7 677654 6789999999987653 3 6789999999999999999 8999 99987 99999
Q ss_pred eccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCC-----CCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCC--CCc
Q 040085 220 PVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSG-----NKERYSFGSFSMPKEGVATEVPNELVDDDHPLVY--RPF 292 (316)
Q Consensus 220 ~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y--~~~ 292 (316)
+|+|+||++|||+||+||+||||+|||++|||+.++ ..+||||+||++|+.|++|. +++++++++|++| +++
T Consensus 214 ~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~ 292 (311)
T 1dcs_A 214 DLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETA 292 (311)
T ss_dssp ECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEE
T ss_pred eCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCc
Confidence 999999999999999999999999999999999987 67899999999999999999 9999998899999 999
Q ss_pred CHHHHHHHHHhc
Q 040085 293 KFSEFMAYFVNN 304 (316)
Q Consensus 293 t~~e~~~~~~~~ 304 (316)
|++||++.++++
T Consensus 293 t~~ey~~~~~~~ 304 (311)
T 1dcs_A 293 TFQDWIGGNYVN 304 (311)
T ss_dssp EHHHHHCSSCCC
T ss_pred cHHHHHHHHHHH
Confidence 999999887766
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=3.7e-69 Score=485.65 Aligned_cols=253 Identities=21% Similarity=0.327 Sum_probs=220.1
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCC
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYRS 86 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~G 86 (316)
++||||||+.. +.+++|.+||++||||||+|||||.++++++++.+++||++ |+|+++... ..++|
T Consensus 2 ~~IPvIDls~~-----------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~G 68 (280)
T 3on7_A 2 MKLETIDYRAA-----------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDG 68 (280)
T ss_dssp --CCEEETTST-----------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCE
T ss_pred CCCCEEECCCh-----------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCc
Confidence 47999999862 34789999999999999999999999999999999999998 899998754 46899
Q ss_pred CCCCC-C-------CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 040085 87 YMGES-P-------AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG 158 (316)
Q Consensus 87 Y~~~~-~-------~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 158 (316)
|.+.+ . ..|++|.|.+. .||..+++||+.+++|+++|.+|+..||++|+++||++
T Consensus 69 Y~~~~~~e~~~~~~~~D~kE~~~~~-----------------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 131 (280)
T 3on7_A 69 FFPASISETAKGHTVKDIKEYYHVY-----------------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDE 131 (280)
T ss_dssp EECCC--------CCCCSCEEEEEC-----------------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHH
T ss_pred cccCccccccCCCCcccHHHHHhcC-----------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 98754 1 23566666552 37777799999999999999999999999999999976
Q ss_pred --cc----hhhhccCcc-ceeeeccccCCCCCC--CCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEE
Q 040085 159 --KL----YVPHIQGSI-TLFRLMKYKVPPNNE--SAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASV 229 (316)
Q Consensus 159 --~~----f~~~~~~~~-~~lr~~~Yp~~~~~~--~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~v 229 (316)
+. |.+.+..+. +.||++||||++.++ ..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~v 211 (280)
T 3on7_A 132 IKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNII 211 (280)
T ss_dssp HHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEE
T ss_pred chhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEE
Confidence 23 345555444 899999999998644 478999999999999999999999999989999999999999999
Q ss_pred EEhhHHHHHHhCCCCcCCCceeecCC----CCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085 230 VIVGDTLKAWSNGRLKAPKHRVMMSG----NKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN 304 (316)
Q Consensus 230 Vn~Gd~l~~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 304 (316)
||+||+||+||||+|||++|||+.++ ..+|||++||++|+.|++|.| ++|++||++.|++.
T Consensus 212 VNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 212 INIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp EEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred EEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999999999999999999999874 468999999999999999974 58999999999876
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.14 E-value=0.042 Score=47.45 Aligned_cols=79 Identities=16% Similarity=0.034 Sum_probs=53.2
Q ss_pred ceeeeccccCCCCCCCCcccccccCCC-----------ceeEEee--C----CCCceEEEecCCceEeccCCCCcEEEEh
Q 040085 170 TLFRLMKYKVPPNNESAVGLIPHTDKN-----------VLSILCE--N----NVQGLEILNKDGVYVPVGVPDNASVVIV 232 (316)
Q Consensus 170 ~~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~q--d----~~~GLqv~~~~g~W~~V~p~~g~~vVn~ 232 (316)
.-+++++|.+-. -..+|.|.. .+|+++. | ..|.|.+.+..| =..|+|..|.+|+.-
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-~~~V~P~~G~~v~F~ 171 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-QQSIKLSAGSLVLYP 171 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-EEEECCCTTCEEEEE
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-cEEEecCCCEEEEEC
Confidence 347888897632 245666652 4555544 3 135577754433 468999999999975
Q ss_pred hHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeC
Q 040085 233 GDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSM 267 (316)
Q Consensus 233 Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 267 (316)
. .++|+|.......|++++.+++
T Consensus 172 s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 172 S------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp T------------TSEEEECCEEEECEEEEEEEEE
T ss_pred C------------CCeEcCccccccCEEEEEEehh
Confidence 3 3699998765679999998876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=94.27 E-value=1.1 Score=37.75 Aligned_cols=43 Identities=16% Similarity=0.044 Sum_probs=33.6
Q ss_pred CceEeccCCCCcEEEEhhHHHHHHhCCCCcCCCceeecCC-CCceEEEEEeeCCCC
Q 040085 216 GVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSG-NKERYSFGSFSMPKE 270 (316)
Q Consensus 216 g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ks~~HRV~~~~-~~~R~Si~~F~~P~~ 270 (316)
..+..|.|.+|.+||.-.. -.|.|.... +.+|+||+|-+.|..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3577899999999998763 489998764 468999999887754
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=88.53 E-value=1.6 Score=36.62 Aligned_cols=84 Identities=11% Similarity=0.059 Sum_probs=51.0
Q ss_pred eeeeccccCCCCCCCCcccccccCCC-----------ceeEEee--CC-CCc-eEEEecCCceEeccCCCCcEEEEhhHH
Q 040085 171 LFRLMKYKVPPNNESAVGLIPHTDKN-----------VLSILCE--NN-VQG-LEILNKDGVYVPVGVPDNASVVIVGDT 235 (316)
Q Consensus 171 ~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~q--d~-~~G-Lqv~~~~g~W~~V~p~~g~~vVn~Gd~ 235 (316)
.+++++|.+... -.+|.|+. .+|+++. |. .|| +.+ ++. =+.|.|..|.+|+.-.-
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F--p~~-~~~V~P~~G~al~f~~~- 181 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF--PKL-NLSVHPRKGMAVYFEYF- 181 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE--TTT-TEEECCCTTCEEEEECC-
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe--cCC-CCEEecCCCeEEEEecc-
Confidence 477888865321 35666653 3677765 21 233 443 332 27899999998876430
Q ss_pred HHHHhCCC-CcCCCceeecCCCCceEEEEEeeC
Q 040085 236 LKAWSNGR-LKAPKHRVMMSGNKERYSFGSFSM 267 (316)
Q Consensus 236 l~~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~ 267 (316)
..+|. -..++|+|.......|+++..+++
T Consensus 182 ---~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 182 ---YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp ---CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred ---CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 00111 146899997665568999988765
No 10
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=86.48 E-value=1.4 Score=37.85 Aligned_cols=80 Identities=14% Similarity=0.195 Sum_probs=53.9
Q ss_pred eeeccccCCCCCCCCcccccccCCC-----ceeEEee--C------CCCceEEEecCC-ceEeccCCCCcEEEEhhHHHH
Q 040085 172 FRLMKYKVPPNNESAVGLIPHTDKN-----VLSILCE--N------NVQGLEILNKDG-VYVPVGVPDNASVVIVGDTLK 237 (316)
Q Consensus 172 lr~~~Yp~~~~~~~~~~~~~HtD~~-----~lTlL~q--d------~~~GLqv~~~~g-~W~~V~p~~g~~vVn~Gd~l~ 237 (316)
+.+.+|++. .-....|.|.. .+|+++. + ..|.|.+.+.++ ....|.|..|.+|+.-.+
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~--- 190 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD--- 190 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS---
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC---
Confidence 567788751 12456677762 5777765 2 134477764432 578999999999988642
Q ss_pred HHhCCCCcCCCceeecCCCCceEEEEEeeC
Q 040085 238 AWSNGRLKAPKHRVMMSGNKERYSFGSFSM 267 (316)
Q Consensus 238 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 267 (316)
.-.+|.|.. ....|+||+..++
T Consensus 191 -------~~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 191 -------RRNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp -------TTCCEEECC-BSSCEEEEEEEEE
T ss_pred -------CCceeeecc-CCCEEEEEEEEEc
Confidence 126899976 4569999987665
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.95 E-value=1.9 Score=36.23 Aligned_cols=47 Identities=11% Similarity=0.055 Sum_probs=33.6
Q ss_pred eEeccCCCCcEEEEhhHHHHHHhCCCC-cCCCceeecCCCCceEEEEEeeCC
Q 040085 218 YVPVGVPDNASVVIVGDTLKAWSNGRL-KAPKHRVMMSGNKERYSFGSFSMP 268 (316)
Q Consensus 218 W~~V~p~~g~~vVn~Gd~l~~~TnG~~-ks~~HRV~~~~~~~R~Si~~F~~P 268 (316)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4899999999888643 1123322 578999976655689999888763
No 12
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=84.79 E-value=1.3 Score=40.16 Aligned_cols=93 Identities=22% Similarity=0.332 Sum_probs=62.1
Q ss_pred eeeeccccCCCCCCCCcccccccCCC------ceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHHHHhCCCC
Q 040085 171 LFRLMKYKVPPNNESAVGLIPHTDKN------VLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRL 244 (316)
Q Consensus 171 ~lr~~~Yp~~~~~~~~~~~~~HtD~~------~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG~~ 244 (316)
.+-+|.|.+- -++++|.|-. ++|+=+. ...-+.+..++|.++.+...+|+++|.-|++=..|..|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4457889652 2789999974 2233232 2344566556678999999999999999999999977765
Q ss_pred cCCCceeec------------------CCCCceEEEEEeeCCCC
Q 040085 245 KAPKHRVMM------------------SGNKERYSFGSFSMPKE 270 (316)
Q Consensus 245 ks~~HRV~~------------------~~~~~R~Si~~F~~P~~ 270 (316)
+-...-+-. .+...|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 544333211 11346999999776654
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=84.40 E-value=3 Score=35.48 Aligned_cols=85 Identities=14% Similarity=0.157 Sum_probs=53.9
Q ss_pred eeeeccccCCCCCCCCcccccccCCC--------ceeEEeeCCCCceEEEecC----------CceEeccCCCCcEEEEh
Q 040085 171 LFRLMKYKVPPNNESAVGLIPHTDKN--------VLSILCENNVQGLEILNKD----------GVYVPVGVPDNASVVIV 232 (316)
Q Consensus 171 ~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~qd~~~GLqv~~~~----------g~W~~V~p~~g~~vVn~ 232 (316)
.+-+|+|.+.. -++++|.|-. +.||-+.. ..=+.+.... +..+.+...+|+++|.-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 34578997532 3788999842 22333321 1234443322 36899999999999999
Q ss_pred hHHHHHHhCCCCcCCCceeecCCCCceEEEEEeeC
Q 040085 233 GDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSM 267 (316)
Q Consensus 233 Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 267 (316)
|++=..|..|.-+.. .....|+|+.|=..
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998777766554321 12468999998553
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=77.61 E-value=6.3 Score=32.63 Aligned_cols=80 Identities=13% Similarity=0.130 Sum_probs=50.4
Q ss_pred eeeccccCCCCCCCCcccccccCCC--------ceeEEeeCCCCceEEEec---------CCceEeccCCCCcEEEEhhH
Q 040085 172 FRLMKYKVPPNNESAVGLIPHTDKN--------VLSILCENNVQGLEILNK---------DGVYVPVGVPDNASVVIVGD 234 (316)
Q Consensus 172 lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~qd~~~GLqv~~~---------~g~W~~V~p~~g~~vVn~Gd 234 (316)
+-+|+|.+.. -++++|.|-. ++++-+. ...-+.+..+ .+..+.+...+|+++|.-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 4478897532 3788998862 1233232 1233444432 12578899999999999999
Q ss_pred HHHHHhCCCCcCCCceeecC--CCCceEEEEEe
Q 040085 235 TLKAWSNGRLKAPKHRVMMS--GNKERYSFGSF 265 (316)
Q Consensus 235 ~l~~~TnG~~ks~~HRV~~~--~~~~R~Si~~F 265 (316)
+=..|.. .|-.. ....|+|+.|=
T Consensus 176 ~q~~w~H--------~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWYH--------SLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEEE--------EECCCTTCCSCEEEEEEE
T ss_pred hhheeEe--------eccccCCCCCCEEEEEee
Confidence 8777764 44322 23689999984
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=65.16 E-value=18 Score=30.05 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=49.5
Q ss_pred eeeccccCCCCCCCCcccccccCC-----C--ceeEEeeCCCCceEEEe--cCCceEeccCCCCcEEEEhhHHHHHHhCC
Q 040085 172 FRLMKYKVPPNNESAVGLIPHTDK-----N--VLSILCENNVQGLEILN--KDGVYVPVGVPDNASVVIVGDTLKAWSNG 242 (316)
Q Consensus 172 lr~~~Yp~~~~~~~~~~~~~HtD~-----~--~lTlL~qd~~~GLqv~~--~~g~W~~V~p~~g~~vVn~Gd~l~~~TnG 242 (316)
.-+|+|.+- . ++++|.|- + ++|+-+. ...-+.+.. +.+..+.+...+|+++|.-|++ +
T Consensus 107 ~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r----- 173 (211)
T 3i3q_A 107 CLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-R----- 173 (211)
T ss_dssp EEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-T-----
T ss_pred EEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchH-H-----
Confidence 457888652 2 79999993 2 2233332 123344432 2356889999999999998875 1
Q ss_pred CCcCCCceeecCCC-------CceEEEEEee
Q 040085 243 RLKAPKHRVMMSGN-------KERYSFGSFS 266 (316)
Q Consensus 243 ~~ks~~HRV~~~~~-------~~R~Si~~F~ 266 (316)
+ -.|.|..... ..|+|+.|-.
T Consensus 174 -~--~~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 174 -L--FYHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -T--CCEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -c--eEeccCcccCCcCCCCCCCEEEEEeee
Confidence 1 2588765432 3599999854
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=56.68 E-value=5.1 Score=37.41 Aligned_cols=54 Identities=15% Similarity=0.244 Sum_probs=40.1
Q ss_pred CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 040085 7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFD 69 (316)
Q Consensus 7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 69 (316)
+.-||.||++++ .++ .+.++..+.+++.|++.|.|. ||.+......+...+|.+
T Consensus 98 ~~~iP~i~f~di--~~~------~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADI--KAG------HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHH--HHT------CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHh--cCC------CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 456999999873 222 123456678899999999887 899888888887777753
No 17
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=54.44 E-value=33 Score=30.49 Aligned_cols=47 Identities=13% Similarity=0.031 Sum_probs=33.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC----hHHHHHHHHHHHHhcC
Q 040085 20 LDDFTDERWREMCGQVRDALETHGFFVMYHDKIP----KSLREDMFKAMNALFD 69 (316)
Q Consensus 20 l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 69 (316)
|..++++ ++.+++.+.++.-||+.=.+|||+ .+-++.+.+++++|++
T Consensus 298 l~~g~~e---~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVD---KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHH---HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHH---HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 3456663 344455566667788776789875 5889999999999985
No 18
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=52.24 E-value=8.8 Score=31.80 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=28.7
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKI 52 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 52 (316)
.||++++.. .++. ++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~----~g~~----~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYR----PGSP----ELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCC----TTCH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCC----CCcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 689998864 2444 67888899998888899999996
No 19
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=46.82 E-value=12 Score=31.10 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=28.4
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKI 52 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 52 (316)
.||++++.. .++. ++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~----~g~~----~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYAT----FGTR----ELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCC----TTCH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCC----CCcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 688998864 2444 67788899998888899999996
No 20
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=46.71 E-value=22 Score=19.70 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhhcceEEE
Q 040085 30 EMCGQVRDALETHGFFVM 47 (316)
Q Consensus 30 ~~~~~l~~A~~~~Gff~l 47 (316)
.+++.|.-.|.+-||||-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 688999999999999983
No 21
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=42.73 E-value=16 Score=29.95 Aligned_cols=51 Identities=22% Similarity=0.214 Sum_probs=35.4
Q ss_pred CCcee-eCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--h------HHHHHHHHHHHHh
Q 040085 9 EIPFL-DFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--K------SLREDMFKAMNAL 67 (316)
Q Consensus 9 ~iPvI-Dl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~------~~~~~~~~~~~~f 67 (316)
.||++ ++.. .+++ ++++.+.+++.+.-.+.|.|||+= - +.+++++..+..+
T Consensus 117 ~ip~~~~y~~----~g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTV----SATE----EAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCC----SSSH----HHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCC----CCcH----HHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 68998 7754 2444 677788888888888999999852 2 4566666655543
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=42.36 E-value=18 Score=30.52 Aligned_cols=51 Identities=8% Similarity=0.064 Sum_probs=34.7
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
..||++++.. .++. ++++++.+++++.-.+.|.|||+= -+.+++++..+..
T Consensus 160 ~~v~~~~y~~----~g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~ 212 (238)
T 1pvt_A 160 QGISVVEFEK----PGSV----ELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEI 212 (238)
T ss_dssp SCCEEECCCS----TTCH----HHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHHH
T ss_pred CCceEecCCC----CCcH----HHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 3689998864 2454 677888889988888999999963 2334444444443
No 23
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=39.30 E-value=12 Score=34.06 Aligned_cols=52 Identities=19% Similarity=0.115 Sum_probs=38.2
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDL 70 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 70 (316)
++|.||++++ + . + .+...++.+|+.++|++.+.|-.++.+. ..+.++.|-.+
T Consensus 122 ~~~~~~~~~~-l-~-~----d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDV-L-R-Y----DEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHH-H-H-C----HHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHH-h-c-C----HHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 6899999873 2 1 2 2677889999999999999999887543 34556666444
No 24
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=37.66 E-value=17 Score=31.40 Aligned_cols=50 Identities=10% Similarity=0.167 Sum_probs=34.4
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||++++.. .++. ++++.+.+++.+.-.+.|.|||+= -+.+++++..+..
T Consensus 179 ~v~v~~y~~----~g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e~ 230 (274)
T 2v9l_A 179 GVGILPWMV----PGTD----AIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDT 230 (274)
T ss_dssp CEEECCCCC----SSSH----HHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred ceeEecCCC----CCCH----HHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 588888754 3454 678888999988888999999963 2334444444443
No 25
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=35.80 E-value=34 Score=29.31 Aligned_cols=49 Identities=16% Similarity=0.131 Sum_probs=34.7
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhc
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALF 68 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 68 (316)
+|+-||+++. + ++ +..++|.+++.++|++.+.+-.++.+. ..+.++.|=
T Consensus 17 ei~gvdl~~~-l---~~----~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 17 QISGADLTRP-L---SD----NQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp EEESCCSSSC-C---CH----HHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred EEECCCcCcc-C---CH----HHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 4666788763 2 22 467889999999999999998876643 334555553
No 26
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=34.85 E-value=93 Score=24.82 Aligned_cols=41 Identities=0% Similarity=0.045 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcceEEEEcC-CCChHHHHHHHHHHHH
Q 040085 26 ERWREMCGQVRDALETHGFFVMYHD-KIPKSLREDMFKAMNA 66 (316)
Q Consensus 26 ~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 66 (316)
+.+...+++|.+.+++...++++++ |++...+.++....++
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 3678899999999999998888865 8998777777666553
No 27
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=33.65 E-value=17 Score=29.83 Aligned_cols=49 Identities=14% Similarity=0.141 Sum_probs=31.4
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcc---eEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHG---FFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||+++... +. .++++.+.+++.+.+ .+.|.|||+= -+.+++++..+..
T Consensus 139 ~vp~~~~~~-----g~----~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~ 192 (208)
T 2irp_A 139 KIPIFPNEQ-----NI----PLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEA 192 (208)
T ss_dssp EEEEECCCS-----CH----HHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHH
T ss_pred ceeeecCCC-----CH----HHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHH
Confidence 577777632 22 367888888998765 7889999963 2334444444433
No 28
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=33.17 E-value=95 Score=24.58 Aligned_cols=39 Identities=18% Similarity=0.297 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhhcc-eEEEEcC-CCChHHHHHHHHHHH
Q 040085 27 RWREMCGQVRDALETHG-FFVMYHD-KIPKSLREDMFKAMN 65 (316)
Q Consensus 27 ~~~~~~~~l~~A~~~~G-ff~l~nh-gi~~~~~~~~~~~~~ 65 (316)
.+...+++|.+.+++.. .+++.++ |++...+.++....+
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 57788999999999998 7777665 899877777666555
No 29
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=30.11 E-value=32 Score=29.70 Aligned_cols=52 Identities=8% Similarity=0.174 Sum_probs=34.1
Q ss_pred CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
..||++|+... ..+. ++++.|.+++.+.-.+.|.|||+= -+.+++++..+..
T Consensus 155 g~v~~~~y~~~---~~~~----el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~~ 208 (273)
T 3ocr_A 155 GRVAYHGYEGI---ALDL----SERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLHA 208 (273)
T ss_dssp TTEEEECCCCS---SCCH----HHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CCEEEECCCCC---CCCH----HHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHHH
Confidence 35888888752 1233 567788888888889999999963 2334444444433
No 30
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=28.31 E-value=66 Score=28.05 Aligned_cols=63 Identities=13% Similarity=0.013 Sum_probs=38.9
Q ss_pred ccccccCC--------CceeEEee-CCCCceEEEecCCceEeccCCCCc-EEEEhhHHHHHHhCCCCcCCCceeecCCCC
Q 040085 188 GLIPHTDK--------NVLSILCE-NNVQGLEILNKDGVYVPVGVPDNA-SVVIVGDTLKAWSNGRLKAPKHRVMMSGNK 257 (316)
Q Consensus 188 ~~~~HtD~--------~~lTlL~q-d~~~GLqv~~~~g~W~~V~p~~g~-~vVn~Gd~l~~~TnG~~ks~~HRV~~~~~~ 257 (316)
.+.+|.|. +.+-+... ...+|.... -+|+-+..++ |. ..+|. +..|+|.+.+..
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~-vdg~~~~m~~--GE~w~~d~-------------~~~H~v~N~g~~ 166 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHS-NEDTVIHMRP--GEIWFLDA-------------ATVHSAVNFSEI 166 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEE-ETTEEECCCT--TEEEECCT-------------TSCEEEEESSSS
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEE-ECCEEEecCC--CCEEEEcC-------------CCeeEEEcCCCC
Confidence 57889998 22333332 134666653 4564444443 43 33332 358999999999
Q ss_pred ceEEEEEee
Q 040085 258 ERYSFGSFS 266 (316)
Q Consensus 258 ~R~Si~~F~ 266 (316)
+|+.+.+=+
T Consensus 167 ~RIhLv~D~ 175 (290)
T 1e5r_A 167 SRQSLCVDF 175 (290)
T ss_dssp CCCEEEEEE
T ss_pred CeEEEEEEe
Confidence 999998755
No 31
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=27.04 E-value=56 Score=28.20 Aligned_cols=37 Identities=11% Similarity=0.087 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhcceEEEEcCC-CChHHHHHHHHHHHHhcC
Q 040085 30 EMCGQVRDALETHGFFVMYHDK-IPKSLREDMFKAMNALFD 69 (316)
Q Consensus 30 ~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 69 (316)
+..++|.+++.++|++.+.|-. ++. +...+.++.|-.
T Consensus 40 ~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 40 ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4678899999999999999887 775 444556666644
No 32
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=25.49 E-value=53 Score=20.48 Aligned_cols=29 Identities=24% Similarity=0.351 Sum_probs=17.9
Q ss_pred ceeeCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVLDDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|.|.+.- +...+++.++++++.|.+++.+
T Consensus 1 P~i~I~~--~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYI--IEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEE--ESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE--cCCCCHHHHHHHHHHHHHHHHH
Confidence 4555542 2233566777788888777765
No 33
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=24.81 E-value=25 Score=30.46 Aligned_cols=21 Identities=10% Similarity=0.286 Sum_probs=17.6
Q ss_pred CCCCcccccccCCCceeEEee
Q 040085 183 NESAVGLIPHTDKNVLSILCE 203 (316)
Q Consensus 183 ~~~~~~~~~HtD~~~lTlL~q 203 (316)
+...++..+|.++.++|.+++
T Consensus 48 ~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 48 ERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp CTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCcEEEEEEEE
Confidence 334678889999999999987
No 34
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=24.18 E-value=58 Score=20.22 Aligned_cols=29 Identities=28% Similarity=0.506 Sum_probs=18.3
Q ss_pred ceeeCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 040085 11 PFLDFSGEVLDDFTDERWREMCGQVRDALET 41 (316)
Q Consensus 11 PvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~ 41 (316)
|.|.+.- +...+++.+++++++|.+++.+
T Consensus 1 P~i~i~~--~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKM--LEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEE--ESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE--cCCCCHHHHHHHHHHHHHHHHH
Confidence 4555542 2333566778888888887765
No 35
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=24.00 E-value=42 Score=28.87 Aligned_cols=54 Identities=9% Similarity=0.191 Sum_probs=33.4
Q ss_pred CCceeeCCC-C----CCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCC--hHHHHHHHHHHHH
Q 040085 9 EIPFLDFSG-E----VLDDFTDERWREMCGQVRDALETHGFFVMYHDKIP--KSLREDMFKAMNA 66 (316)
Q Consensus 9 ~iPvIDl~~-~----~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~--~~~~~~~~~~~~~ 66 (316)
.||++++.. + +...+++ ++++.|.+++.+.-.+.|.|||+= -+.+++++..+..
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~----ela~~ia~~l~~~~avLL~nHG~~~~G~tl~eA~~~~~~ 217 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSP----DVCADIAESLGSQTVVLMARHGVVNVGKSVREVVFRAFY 217 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSH----HHHHHHHHHHTTSSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CCceecccccCCcccccccCCH----HHHHHHHHHhccCCEEEEcCCceEEEeCCHHHHHHHHHH
Confidence 588888631 0 0122344 677888888888888999999963 2334444444443
No 36
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=23.63 E-value=1.5e+02 Score=24.41 Aligned_cols=41 Identities=5% Similarity=0.110 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhcceEEEEc-CCCChHHHHHHHHHHHH
Q 040085 26 ERWREMCGQVRDALETHGFFVMYH-DKIPKSLREDMFKAMNA 66 (316)
Q Consensus 26 ~~~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 66 (316)
+.+.+.+++|.+.+.++..++|++ +|++...++++....++
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 356788999999999998777765 58988777777766553
No 37
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=20.57 E-value=78 Score=27.10 Aligned_cols=50 Identities=18% Similarity=0.222 Sum_probs=35.9
Q ss_pred CCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 040085 9 EIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFD 69 (316)
Q Consensus 9 ~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 69 (316)
+|.=|||++. | ++ +..++|.+|+.++|.+.+.|-.++.+ +..+.++.|=.
T Consensus 15 ei~gvdl~~~-l---~~----~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 15 QISGVDISRD-I---SA----EERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEESCCTTSC-C---CH----HHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEeCCCcccc-C---CH----HHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 5666788763 2 22 56788999999999999999888764 33455666643
No 38
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=20.35 E-value=2.1e+02 Score=25.51 Aligned_cols=45 Identities=13% Similarity=0.112 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHHHHHHhh-cceEEEEcCCCC----hHHHHHHHHHHHHh
Q 040085 23 FTDERWREMCGQVRDALET-HGFFVMYHDKIP----KSLREDMFKAMNAL 67 (316)
Q Consensus 23 ~~~~~~~~~~~~l~~A~~~-~Gff~l~nhgi~----~~~~~~~~~~~~~f 67 (316)
+++++..+.++++.+++.. -||+.=.+|||+ .+.++.+.++++++
T Consensus 309 gt~e~I~~~v~~~l~~~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 309 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp SCHHHHHHHHHHHHHHHCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 5666777777778777763 678888899985 57788888888776
No 39
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=20.30 E-value=1e+02 Score=26.04 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=29.6
Q ss_pred HHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhc
Q 040085 33 GQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALF 68 (316)
Q Consensus 33 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 68 (316)
+++.+.+++.||+.|.|- ++.+.++++.+...+++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~ 56 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGL 56 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 457889999999999875 89999999988888764
Done!