BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040088
(131 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549668|ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus communis]
gi|223544790|gb|EEF46305.1| 60S ribosomal protein L28, putative [Ricinus communis]
Length = 144
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 89/136 (65%), Gaps = 25/136 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWE VKKNNCFLVK+FGRGSAS + + + YK G
Sbjct: 1 MATVPGQLIWEAVKKNNCFLVKQFGRGSASVQFSKEPNNLYNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIA 114
N+ KTV+IQ GKDQ V+LATTKTKKQN+P ALLHKSVMK E RMAK +
Sbjct: 51 ---LSNK------KTVSIQAGKDQSVILATTKTKKQNRPSALLHKSVMKKEFRRMAKAVQ 101
Query: 115 NRVGDNYYQPDLKNAV 130
N+VGDNYY+PDLK A
Sbjct: 102 NQVGDNYYRPDLKKAA 117
>gi|351728103|ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
gi|255629617|gb|ACU15156.1| unknown [Glycine max]
Length = 150
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 89/136 (65%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWE+VKKNN FLVKEFGRG+ S + + + +K+ G
Sbjct: 1 MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVT+QP GKDQ V+LATTKTKKQNKP ALLHKSVMK E RMAK +
Sbjct: 51 ---LANK------KTVTVQPTGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
N+V DNYY+PDLK A
Sbjct: 102 QNQVADNYYRPDLKKA 117
>gi|356550472|ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
Length = 150
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 88/131 (67%), Gaps = 16/131 (12%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAH-AVITCSVYKFGGRKIECSTFVFGRFCG 59
M+TV GQLIWEIVKKNN FLVKEFGRG+ S + ++Y +TF +
Sbjct: 1 MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLY-------NLNTFKYSGLAN 53
Query: 60 NRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVG 118
KTVT+QP GKDQ V+LATTKTKKQNKP ALLHKSVMK E RMAK + N+V
Sbjct: 54 Q-------KTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVA 106
Query: 119 DNYYQPDLKNA 129
DNYY+PDLK A
Sbjct: 107 DNYYRPDLKRA 117
>gi|351722416|ref|NP_001238011.1| uncharacterized protein LOC100499921 [Glycine max]
gi|255627703|gb|ACU14196.1| unknown [Glycine max]
Length = 150
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV GQL+WEIVKKNN FLVK+FGRG+ S ++ + + +K+ G
Sbjct: 1 MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVT+QP GKDQ V+LATTKTKKQNKP ALLHKSVMK E RMAK +
Sbjct: 51 ---LANK------KTVTVQPEGKDQAVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
N+V +NYY+PDLK A
Sbjct: 102 ENQVAENYYRPDLKKA 117
>gi|224054432|ref|XP_002298257.1| predicted protein [Populus trichocarpa]
gi|118482187|gb|ABK93022.1| unknown [Populus trichocarpa]
gi|222845515|gb|EEE83062.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 84/130 (64%), Gaps = 14/130 (10%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
MATV GQLIWEIVKKNN FLVK+FGRG+AS +F + G
Sbjct: 1 MATVPGQLIWEIVKKNNSFLVKQFGRGTAS---------LQFSKENNNLYNLNSYKHSGL 51
Query: 61 RGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD 119
KK TVTIQP KDQ VVLATTKTKKQNKP ALLHKSVMK E RMAK + N+V D
Sbjct: 52 ANKK----TVTIQPADKDQAVVLATTKTKKQNKPAALLHKSVMKKEFSRMAKAVENQVAD 107
Query: 120 NYYQPDLKNA 129
N Y+PDLK A
Sbjct: 108 NNYRPDLKRA 117
>gi|255546219|ref|XP_002514169.1| 60S ribosomal protein L28, putative [Ricinus communis]
gi|223546625|gb|EEF48123.1| 60S ribosomal protein L28, putative [Ricinus communis]
Length = 144
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 89/137 (64%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVK NN FLVKEFGRG+AS ++ + + YK G
Sbjct: 1 MATVPGQLIWEIVKTNNSFLVKEFGRGNASVQFSKESNNLYNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTV+IQPG KD VVLATTKTKKQNKP + LHKSVM+ E RMAK +
Sbjct: 51 ---LANK------KTVSIQPGGKDLSVVLATTKTKKQNKPASSLHKSVMRKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
+N+VGDNYY+PDLK A
Sbjct: 102 SNQVGDNYYRPDLKKAA 118
>gi|225442353|ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Vitis vinifera]
gi|147863559|emb|CAN84039.1| hypothetical protein VITISV_024169 [Vitis vinifera]
gi|297743118|emb|CBI35985.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 87/136 (63%), Gaps = 25/136 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVKKN+ FLVKEFG G+AS ++ + + YK G
Sbjct: 1 MATVPGQLIWEIVKKNSSFLVKEFGNGTASVQFSKESNNLYNVNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIA 114
N KTVTIQ GKD VVLATTKTKKQNKP +LLHKS MK E RMAK ++
Sbjct: 51 ---LANH------KTVTIQGGKDNAVVLATTKTKKQNKPGSLLHKSAMKKEFRRMAKAVS 101
Query: 115 NRVGDNYYQPDLKNAV 130
N+VGDNYY+PDLK A
Sbjct: 102 NQVGDNYYRPDLKKAA 117
>gi|224073524|ref|XP_002304107.1| predicted protein [Populus trichocarpa]
gi|224073532|ref|XP_002304108.1| predicted protein [Populus trichocarpa]
gi|118481531|gb|ABK92708.1| unknown [Populus trichocarpa]
gi|222841539|gb|EEE79086.1| predicted protein [Populus trichocarpa]
gi|222841540|gb|EEE79087.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 88/137 (64%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVKKNNCFLVK+FGRG+AS ++ + + YK G
Sbjct: 1 MATVPGQLIWEIVKKNNCFLVKQFGRGTASLRFSKESNNLYNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ G KDQ VVLAT+KTKKQNKP AL HKSVMK E RMAK +
Sbjct: 51 ---LANK------KTVTIQAGDKDQAVVLATSKTKKQNKPAALFHKSVMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V NYY+PDLK A
Sbjct: 102 ENQVEGNYYRPDLKKAA 118
>gi|449458189|ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
sativus]
gi|449458191|ref|XP_004146831.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 2 [Cucumis
sativus]
gi|449476678|ref|XP_004154804.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
sativus]
gi|449476681|ref|XP_004154805.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 2 [Cucumis
sativus]
Length = 148
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 87/137 (63%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MA V GQLIWEIVK+NN FLVKEFGRG+A A+ + + YK G
Sbjct: 1 MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKEANNLYNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQPG KDQ ++LATTK+KKQNKP + LHKS+MK E RMAK +
Sbjct: 51 ---LANK------KTVTIQPGGKDQSILLATTKSKKQNKPSSSLHKSLMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V DNYY+PDLK A
Sbjct: 102 TNQVADNYYRPDLKKAA 118
>gi|89258491|gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
Length = 150
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 88/137 (64%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWE+VK+NNCFLVK+FGRG+A + + + YK G
Sbjct: 1 MATVPGQLIWEVVKRNNCFLVKQFGRGTAGVRFSKEPNNLYNVNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQP GKDQ V+LATTK+KKQNKP +LLHKSVMK E RMAK +
Sbjct: 51 ---LANK------KTVTIQPAGKDQSVLLATTKSKKQNKPSSLLHKSVMKKEFPRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V DNYY+PDL A
Sbjct: 102 KNQVTDNYYRPDLTKAA 118
>gi|388494168|gb|AFK35150.1| unknown [Lotus japonicus]
Length = 150
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 86/133 (64%), Gaps = 20/133 (15%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
M TV GQL+WEIVKKNN FLVKEFGRG+ S +E S F N
Sbjct: 1 MTTVPGQLVWEIVKKNNSFLVKEFGRGTQS----------------VEFSRESNNLFNLN 44
Query: 61 RGKKIKL---KTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANR 116
K L KTVTIQP GKDQ V+LATTKTKKQNKP ALLHKSVMK E +MAK + N+
Sbjct: 45 SFKHSGLANKKTVTIQPSGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFSKMAKAVENQ 104
Query: 117 VGDNYYQPDLKNA 129
+ +NYY+PDLK A
Sbjct: 105 IANNYYRPDLKKA 117
>gi|351726256|ref|NP_001238400.1| uncharacterized protein LOC100306153 [Glycine max]
gi|255627699|gb|ACU14194.1| unknown [Glycine max]
Length = 150
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 88/137 (64%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV GQL+WEIVKKNN FLVK+FGRG+ S ++ + + +K+ G
Sbjct: 1 MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVT+QP GKDQ V+LATTKTKKQNKP ALLHKSVMK E MAK +
Sbjct: 51 ---LANK------KTVTVQPEGKDQAVLLATTKTKKQNKPAALLHKSVMKKEFRGMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V NYY+PDLK A
Sbjct: 102 ENQVAKNYYRPDLKKAA 118
>gi|388522863|gb|AFK49493.1| unknown [Medicago truncatula]
Length = 143
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 85/137 (62%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV G LIWEIVKKNN FLVKEFG + S ++ + + YKF G
Sbjct: 1 MATVPGPLIWEIVKKNNSFLVKEFGNNTQSVQFSRESNNLYNLNSYKFSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQP GKDQ V+LATTK +KQNKP AL HKS+MK E RMAK +
Sbjct: 51 ---LANK------KTVTIQPAGKDQSVLLATTKPRKQNKPSALSHKSIMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V DNYY+PDLK A
Sbjct: 102 QNQVSDNYYRPDLKKAA 118
>gi|449446572|ref|XP_004141045.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 1 [Cucumis
sativus]
gi|449446574|ref|XP_004141046.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 2 [Cucumis
sativus]
Length = 149
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 86/137 (62%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MA V GQL+WEIVKKN+ FLVKEFGRG+AS + + + YK G
Sbjct: 1 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
NR KTVTIQPG KD V+LAT+KTKKQNKP LHKSVM+ E RMAK +
Sbjct: 51 ---LANR------KTVTIQPGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V DNYY+PDLKNA
Sbjct: 102 INQVADNYYRPDLKNAA 118
>gi|76573317|gb|ABA46763.1| unknown [Solanum tuberosum]
Length = 143
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 87/134 (64%), Gaps = 22/134 (16%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA----SAHAVITCSVYKFGGRKIECSTFVFGR 56
M TV GQL+WEIVKKNN FLVKEFG GSA S C+++ + +
Sbjct: 1 MTTVPGQLVWEIVKKNNSFLVKEFGNGSAGVVFSKEPNNLCNLHSY-------------K 47
Query: 57 FCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIAN 115
G KK TVTIQP GKD+ V+LAT+KTKKQN P +LL+KSVMK E RMAK + N
Sbjct: 48 HSGLANKK----TVTIQPEGKDKSVLLATSKTKKQNMPSSLLNKSVMKKEFRRMAKAVTN 103
Query: 116 RVGDNYYQPDLKNA 129
+VGDNYY+PDLK A
Sbjct: 104 QVGDNYYRPDLKKA 117
>gi|388500342|gb|AFK38237.1| unknown [Medicago truncatula]
Length = 143
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 84/137 (61%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV G LIWEIVKKNN FLVKEFG + S ++ + + YKF G
Sbjct: 1 MATVPGPLIWEIVKKNNSFLVKEFGNNTQSVQFSRESNNLYNLNSYKFSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ GKDQ V+LATTK +KQNKP AL HKS+MK E RMAK +
Sbjct: 51 ---LANK------KTVTIQSAGKDQSVLLATTKPRKQNKPSALSHKSIMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V DNYY+PDLK A
Sbjct: 102 QNQVSDNYYRPDLKKAA 118
>gi|357454709|ref|XP_003597635.1| 60S ribosomal protein L28-1 [Medicago truncatula]
gi|355486683|gb|AES67886.1| 60S ribosomal protein L28-1 [Medicago truncatula]
Length = 146
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 84/137 (61%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV G L+WE+VK+NN FLVKEFG + S + + + YK+ G
Sbjct: 1 MATVPGPLVWEVVKRNNSFLVKEFGNNTQSVQFSREPNNLYNLNSYKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ GKDQ V+LATTK +KQNKP ALLHKSVMK E RMAK +
Sbjct: 51 ---LANK------KTVTIQSAGKDQSVLLATTKPRKQNKPAALLHKSVMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
N+V DNYY+PDLK A
Sbjct: 102 QNQVADNYYRPDLKKAA 118
>gi|15233567|ref|NP_194670.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
gi|145334179|ref|NP_001078470.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
gi|75181446|sp|Q9M0E2.1|RL282_ARATH RecName: Full=60S ribosomal protein L28-2
gi|7269839|emb|CAB79699.1| putative protein [Arabidopsis thaliana]
gi|18252205|gb|AAL61935.1| putative protein [Arabidopsis thaliana]
gi|21593876|gb|AAM65843.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|23197678|gb|AAN15366.1| putative protein [Arabidopsis thaliana]
gi|332660227|gb|AEE85627.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
gi|332660228|gb|AEE85628.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
Length = 143
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 89/136 (65%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVK+NNCFLVK+FGRG+A ++ ++ + YK G
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ GKDQ VVL TTKTK+QNKP ++KS++K E RM+KV+
Sbjct: 51 ---LANK------KTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVV 101
Query: 114 ANRVGDNYYQPDLKNA 129
AN+V DNYY+PDLK A
Sbjct: 102 ANQVVDNYYRPDLKKA 117
>gi|193872598|gb|ACF23027.1| ST45-109 [Eutrema halophilum]
Length = 143
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 87/136 (63%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVK NNCFLVK+FGRG+A ++ + + YK G
Sbjct: 1 MATVPGQLIWEIVKTNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQP K+Q VVLATTKTKKQNKP ++KS++K E RM+K +
Sbjct: 51 ---LANK------KTVTIQPADKEQAVVLATTKTKKQNKPKVSVNKSILKKEFPRMSKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
AN+V DNYY+PDLK A
Sbjct: 102 ANQVVDNYYRPDLKKA 117
>gi|388493460|gb|AFK34796.1| unknown [Lotus japonicus]
gi|388499432|gb|AFK37782.1| unknown [Lotus japonicus]
Length = 150
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 84/136 (61%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MA + GQL+WEIVK+NN FLVKEFG G+ S + + + +K+ G
Sbjct: 1 MAAIPGQLVWEIVKRNNSFLVKEFGNGTQSVQFSREPNNLYNLNTFKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ GKDQ V+L TTK+KK+ KP AL+HKSVMK E RMAK +
Sbjct: 51 ---LANK------KTVTIQAAGKDQSVLLGTTKSKKETKPAALVHKSVMKKEFRRMAKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
N+V DNYY+PDLK A
Sbjct: 102 QNQVADNYYRPDLKKA 117
>gi|15224835|ref|NP_179563.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|79322493|ref|NP_001031374.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|145329182|ref|NP_001077920.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|75100554|sp|O82204.1|RL281_ARATH RecName: Full=60S ribosomal protein L28-1
gi|3687251|gb|AAC62149.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|15292671|gb|AAK92704.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|19310757|gb|AAL85109.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|330251824|gb|AEC06918.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|330251825|gb|AEC06919.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|330251826|gb|AEC06920.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
Length = 143
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 83/137 (60%), Gaps = 26/137 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRG------SASAHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVK NNCFLVK+FGRG S + + YK G
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ KDQ VVLATTKTKKQNKP ++KS++K E RM+K +
Sbjct: 51 ---LANK------KTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAV 101
Query: 114 ANRVGDNYYQPDLKNAV 130
AN+V DNYY+PDLK A
Sbjct: 102 ANQVVDNYYRPDLKKAA 118
>gi|226531358|ref|NP_001147520.1| 60S ribosomal protein L28 [Zea mays]
gi|195610410|gb|ACG27035.1| 60S ribosomal protein L28 [Zea mays]
gi|195611946|gb|ACG27803.1| 60S ribosomal protein L28 [Zea mays]
gi|195624104|gb|ACG33882.1| 60S ribosomal protein L28 [Zea mays]
Length = 146
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 81/134 (60%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV G LIW+IV+KNN FLVK+FG G+A + + YK+ G
Sbjct: 1 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNLHSYKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP GKD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+VGDNYY+PDL
Sbjct: 102 VKNQVGDNYYRPDL 115
>gi|194698148|gb|ACF83158.1| unknown [Zea mays]
gi|413948282|gb|AFW80931.1| 60S ribosomal protein L28 isoform 1 [Zea mays]
gi|413948283|gb|AFW80932.1| 60S ribosomal protein L28 isoform 2 [Zea mays]
gi|413948284|gb|AFW80933.1| 60S ribosomal protein L28 isoform 3 [Zea mays]
gi|413948285|gb|AFW80934.1| 60S ribosomal protein L28 isoform 4 [Zea mays]
Length = 146
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 81/134 (60%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV G LIW+IV+KNN FLVK+FG G+A + + YK+ G
Sbjct: 1 MATVPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP GKD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPAAGKDSAVVLSTTKTKKQNTPAKLSHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+VGDNYY+PDL
Sbjct: 102 VKNQVGDNYYRPDL 115
>gi|297799052|ref|XP_002867410.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
gi|297313246|gb|EFH43669.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 85/136 (62%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVK+NNCFLVK+FGRG+A + ++ + YK G
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKETNNLVNINSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ KDQ VVL TTKTK+QNKP ++KSV+K E RM K +
Sbjct: 51 ---LANK------KTVTIQAADKDQGVVLGTTKTKRQNKPKLSVNKSVLKKEFPRMTKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
AN+V DNYY+PDLK A
Sbjct: 102 ANQVVDNYYRPDLKKA 117
>gi|297836286|ref|XP_002886025.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
gi|297331865|gb|EFH62284.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 83/136 (61%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRG------SASAHAVITCSVYKFGGRKIECSTFVF 54
MATV GQLIWEIVK NNCFLVK+FGRG S + + YK G
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVLFSKETNNLANVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQ K+Q VVLATTKTKKQNKP ++KS++K E RM+K +
Sbjct: 51 ---LANK------KTVTIQAADKEQAVVLATTKTKKQNKPKVSVNKSILKKEFPRMSKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
AN+V DNYY+PDLK A
Sbjct: 102 ANQVVDNYYRPDLKKA 117
>gi|192910792|gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]
Length = 148
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 83/136 (61%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MATV G L+WEIVK+NN FLVK+FG G+A+ ++ + + YK G
Sbjct: 1 MATVPGPLVWEIVKRNNAFLVKQFGNGNATVQFSKESNNLYNVNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTV+IQPG KD VVLATTKTKKQNKP L HKS MK E +MAK +
Sbjct: 51 ---LANK------KTVSIQPGGKDLSVVLATTKTKKQNKPANLYHKSAMKKEFRKMAKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
N+V +NYY+PDL A
Sbjct: 102 MNQVTENYYRPDLTKA 117
>gi|125541661|gb|EAY88056.1| hypothetical protein OsI_09485 [Oryza sativa Indica Group]
Length = 147
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 78/134 (58%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV LIWEIVKKNNCFLVK+FG +A + + YK G
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP GKD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPSGGKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|225429456|ref|XP_002277207.1| PREDICTED: 60S ribosomal protein L28-1 [Vitis vinifera]
gi|147818792|emb|CAN67280.1| hypothetical protein VITISV_021592 [Vitis vinifera]
gi|296081615|emb|CBI20620.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 80/134 (59%), Gaps = 22/134 (16%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA----SAHAVITCSVYKFGGRKIECSTFVFGR 56
MA V G LIWEIVKKNN FLVKEFG G+A S C+V+ F +
Sbjct: 1 MANVPGPLIWEIVKKNNSFLVKEFGNGTAKVQFSKETNNLCNVHSFKHSGL--------- 51
Query: 57 FCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIAN 115
NR KTVTIQPG KD VVLAT+KTKKQN P L KSVMK E RMAK + N
Sbjct: 52 --ANR------KTVTIQPGGKDLSVVLATSKTKKQNNPSISLQKSVMKKEFPRMAKAVVN 103
Query: 116 RVGDNYYQPDLKNA 129
+V DNYY+ DLK A
Sbjct: 104 QVSDNYYRVDLKKA 117
>gi|222632413|gb|EEE64545.1| hypothetical protein OsJ_19397 [Oryza sativa Japonica Group]
Length = 173
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 77/134 (57%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV LIWEIVKKNNCFLVK+FG +A + + YK G
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG--KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|48716267|dbj|BAD22882.1| putative 60S ribosomal protein L28 [Oryza sativa Japonica Group]
gi|48716509|dbj|BAD23114.1| putative 60S ribosomal protein L28 [Oryza sativa Japonica Group]
gi|125584181|gb|EAZ25112.1| hypothetical protein OsJ_08908 [Oryza sativa Japonica Group]
Length = 147
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 77/134 (57%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV L WEIVKKNNCFLVK+FG +A + + YK G
Sbjct: 1 MATVPEPLFWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP GKD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPSGGKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|357132741|ref|XP_003567987.1| PREDICTED: 60S ribosomal protein L28-1-like [Brachypodium
distachyon]
Length = 147
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 78/134 (58%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
M TV G LIWE+VKKNN FLVK+FG G+A + + YKF G
Sbjct: 1 MTTVPGPLIWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKFSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N KTVTIQP G D+ VVLATTKTKKQN P L HK+VM+ E +MAK
Sbjct: 51 --LANN-------KTVTIQPSAGDDKAVVLATTKTKKQNAPAKLQHKNVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVCDNYYRPDL 115
>gi|315113265|pdb|3IZR|BB Chain b, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|55908881|gb|AAV67824.1| putative 60S ribosomal L28 protein [Oryza sativa Japonica Group]
gi|149390813|gb|ABR25424.1| 60S ribosomal protein l28 [Oryza sativa Indica Group]
Length = 147
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 77/134 (57%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV LIWEIVKKNNCFLVK+FG +A + + YK G
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG--KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|242054163|ref|XP_002456227.1| hypothetical protein SORBIDRAFT_03g032450 [Sorghum bicolor]
gi|241928202|gb|EES01347.1| hypothetical protein SORBIDRAFT_03g032450 [Sorghum bicolor]
Length = 145
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 81/134 (60%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV L+W+IV+KNN FL+K+FG G+A + + YK G
Sbjct: 1 MATVPDSLVWQIVRKNNSFLIKQFGNGNAKVQFSKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVT+QP GK+ VVL+TTKTKKQNKP +L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTVQPASGKEAAVVLSTTKTKKQNKPASLHHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+VGDNYY+PDL
Sbjct: 102 VKNQVGDNYYRPDL 115
>gi|115439475|ref|NP_001044017.1| Os01g0706500 [Oryza sativa Japonica Group]
gi|113533548|dbj|BAF05931.1| Os01g0706500 [Oryza sativa Japonica Group]
gi|125571749|gb|EAZ13264.1| hypothetical protein OsJ_03190 [Oryza sativa Japonica Group]
Length = 145
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 80/134 (59%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MAT+ L+WE+VKKNN FLVK+FG G+A + + YK G
Sbjct: 1 MATIPDSLVWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVT+QP GK+ VVL+TTKT+KQNKP +L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTVQPASGKETAVVLSTTKTEKQNKPASLYHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|326516226|dbj|BAJ88136.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV L+WE+V+KNNCFL+K+FG +A + + YK+ G
Sbjct: 1 MATVSDSLVWELVRKNNCFLIKQFGNSNAKVQFSKEPNNLYNVHSYKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG--KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVT+QP K+ VVL+TTK+KKQNKP A HK+VM+ E +MAK
Sbjct: 51 ---LANK------KTVTVQPAAEKEMTVVLSTTKSKKQNKPAAFTHKTVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|192908658|gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]
Length = 148
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 81/136 (59%), Gaps = 26/136 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV G LIWEIVK+NN FLVK+FG G+A + + + YK G
Sbjct: 1 MATVPGPLIWEIVKRNNAFLVKQFGNGNAMVQFSKEPNNLYNVNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTV IQPG KD VVLAT+KTKKQNKP L ++SVMK E +MAK +
Sbjct: 51 ---LANK------KTVAIQPGGKDLSVVLATSKTKKQNKPGNLYNRSVMKKEFRKMAKAV 101
Query: 114 ANRVGDNYYQPDLKNA 129
N+V DNYY+PDL A
Sbjct: 102 KNQVTDNYYRPDLTKA 117
>gi|226509046|ref|NP_001151268.1| LOC100284901 [Zea mays]
gi|194706342|gb|ACF87255.1| unknown [Zea mays]
gi|195609716|gb|ACG26688.1| 60S ribosomal protein L28 [Zea mays]
gi|195610086|gb|ACG26873.1| 60S ribosomal protein L28 [Zea mays]
gi|195645410|gb|ACG42173.1| 60S ribosomal protein L28 [Zea mays]
gi|195646860|gb|ACG42898.1| 60S ribosomal protein L28 [Zea mays]
gi|413946289|gb|AFW78938.1| 60S ribosomal protein L28 isoform 1 [Zea mays]
gi|413946290|gb|AFW78939.1| 60S ribosomal protein L28 isoform 2 [Zea mays]
gi|413946291|gb|AFW78940.1| 60S ribosomal protein L28 isoform 3 [Zea mays]
gi|413946292|gb|AFW78941.1| 60S ribosomal protein L28 isoform 4 [Zea mays]
Length = 143
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 26/133 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV G LIW++V+KNN FLVK+FG G+A + + +K G
Sbjct: 1 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK +
Sbjct: 51 ---LANK------KTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAV 101
Query: 114 ANRVGDNYYQPDL 126
N+V DNYY+PDL
Sbjct: 102 KNQVSDNYYRPDL 114
>gi|125527427|gb|EAY75541.1| hypothetical protein OsI_03446 [Oryza sativa Indica Group]
Length = 145
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 79/134 (58%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MAT+ L+WE+ KKNN FLVK+FG G+A + + YK G
Sbjct: 1 MATIPDSLVWELDKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVT+QP GK+ VVL+TTKT+KQNKP +L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTVQPANGKETAVVLSTTKTEKQNKPASLYHKSVMRKEFRKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|346465839|gb|AEO32764.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 82/135 (60%), Gaps = 21/135 (15%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
MA+V G LIWEIVKKNN FLVK+FG +A K++ S + N
Sbjct: 22 MASVPGDLIWEIVKKNNSFLVKQFGNSTA----------------KVQFSKEPNNLYNLN 65
Query: 61 RGKKIKL---KTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIAN 115
K L KTV+IQP GKD VV+ATTKTKKQ+KP +L HKS+MK E +MAK I N
Sbjct: 66 SFKHSGLANKKTVSIQPAGGKDLSVVVATTKTKKQSKPASLYHKSLMKKEFSKMAKSITN 125
Query: 116 RVGDNYYQPDLKNAV 130
+V +NYY+PDL A
Sbjct: 126 QVTENYYRPDLTKAA 140
>gi|326532738|dbj|BAJ89214.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 147
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
M TV G L+WE+VKKNNCFL+K+FG +A + + YKF G
Sbjct: 1 MTTVPGSLVWELVKKNNCFLIKQFGNSNAKVQFSKEPNNLYNVHSYKFSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N KTV +QP G+D+ VVL+TTKTKKQN P L HK++M+ E +MAK
Sbjct: 51 ---LANS------KTVAVQPSAGEDKAVVLSTTKTKKQNTPAKLQHKTLMRKEFRKMAKS 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVCDNYYRPDL 115
>gi|357136110|ref|XP_003569649.1| PREDICTED: 60S ribosomal protein L28-1-like [Brachypodium
distachyon]
Length = 145
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 27/134 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV L+WE+VKKNN FL+K+FG +A + + YK+ G
Sbjct: 1 MATVPDSLVWELVKKNNSFLIKQFGNSNAKVQFSKEPNNLYNVHSYKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPGKDQ--VVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVT+QP D+ VVL+TTKTKKQNKP A HK+VM+ E +MAK
Sbjct: 51 ---LANK------KTVTVQPASDKEMSVVLSTTKTKKQNKPAAFSHKTVMRKEFCKMAKA 101
Query: 113 IANRVGDNYYQPDL 126
+ N+V DNYY+PDL
Sbjct: 102 VKNQVSDNYYRPDL 115
>gi|125553166|gb|EAY98875.1| hypothetical protein OsI_20825 [Oryza sativa Indica Group]
Length = 154
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 77/141 (54%), Gaps = 34/141 (24%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV LIWEIVKKNNCFLVK+FG +A + + YK G
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG--KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKA 101
Query: 113 IAN-------RVGDNYYQPDL 126
+ N +V DNYY+PDL
Sbjct: 102 VKNQVFDNELQVSDNYYRPDL 122
>gi|195646398|gb|ACG42667.1| 60S ribosomal protein L28 [Zea mays]
Length = 143
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 76/133 (57%), Gaps = 26/133 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV G LIW++V+KNN FLVK+FG G+A + + +K G
Sbjct: 1 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
N+ KTVTIQP KD VVL+ TKTKKQN P L HKSVM E +MAK +
Sbjct: 51 ---LANK------KTVTIQPAAKDSAVVLSXTKTKKQNAPAKLSHKSVMCKEFRKMAKAV 101
Query: 114 ANRVGDNYYQPDL 126
N+V DNYY+PDL
Sbjct: 102 KNQVSDNYYRPDL 114
>gi|116779158|gb|ABK21163.1| unknown [Picea sitchensis]
gi|116780991|gb|ABK21915.1| unknown [Picea sitchensis]
gi|116785203|gb|ABK23632.1| unknown [Picea sitchensis]
gi|116790788|gb|ABK25740.1| unknown [Picea sitchensis]
gi|148907233|gb|ABR16756.1| unknown [Picea sitchensis]
Length = 149
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 81/137 (59%), Gaps = 27/137 (19%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MAT+ GQL+WEIVKKNNCFLVK+ G SA + + YK+ G
Sbjct: 1 MATLPGQLLWEIVKKNNCFLVKQNGNSSAKVQFSREPNNLYNLHTYKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N KT++I P G+D VV+ATTKTKKQ+KP +H+SV+K E +MA+
Sbjct: 51 --LANN-------KTISITPAAGEDLAVVVATTKTKKQHKPADSVHRSVLKKEFRKMARH 101
Query: 113 IANRVGDNYYQPDLKNA 129
+AN+V +NYY+ DLK A
Sbjct: 102 VANQVDENYYRRDLKKA 118
>gi|449488009|ref|XP_004157911.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 1 [Cucumis
sativus]
gi|449488011|ref|XP_004157912.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 2 [Cucumis
sativus]
Length = 118
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 75/124 (60%), Gaps = 26/124 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MA V GQL+WEIVKKN+ FLVKEFGRG+AS + + + YK G
Sbjct: 1 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
NR KTVTIQPG KD V+LAT+KTKKQNKP LHKSVM+ E RMAK +
Sbjct: 51 ---LANR------KTVTIQPGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAV 101
Query: 114 ANRV 117
N+V
Sbjct: 102 INQV 105
>gi|449488013|ref|XP_004157913.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 3 [Cucumis
sativus]
Length = 108
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 74/123 (60%), Gaps = 26/123 (21%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVF 54
MA V GQL+WEIVKKN+ FLVKEFGRG+AS + + + YK G
Sbjct: 1 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVI 113
NR KTVTIQPG KD V+LAT+KTKKQNKP LHKSVM+ E RMAK +
Sbjct: 51 ---LANR------KTVTIQPGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAV 101
Query: 114 ANR 116
N+
Sbjct: 102 INQ 104
>gi|413946293|gb|AFW78942.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 156
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 26/122 (21%)
Query: 12 IVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGKKI 65
+V+KNN FLVK+FG G+A + + +K G N+
Sbjct: 25 VVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG-------------LANK---- 67
Query: 66 KLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQP 124
KTVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK + N+V DNYY+P
Sbjct: 68 --KTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQVSDNYYRP 125
Query: 125 DL 126
DL
Sbjct: 126 DL 127
>gi|55908882|gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sativa Japonica Group]
gi|215694857|dbj|BAG90048.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 69/125 (55%), Gaps = 27/125 (21%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVF 54
MATV LIWEIVKKNNCFLVK+FG +A + + YK G
Sbjct: 1 MATVPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPG--KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKV 112
N+ KTVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK
Sbjct: 51 ---LANK------KTVTIQPSGVKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKA 101
Query: 113 IANRV 117
+ N+V
Sbjct: 102 VKNQV 106
>gi|149391307|gb|ABR25671.1| 60S ribosomal protein l28 [Oryza sativa Indica Group]
Length = 131
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 65/118 (55%), Gaps = 27/118 (22%)
Query: 17 NCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGKKIKLKTV 70
NCFLVK+FG +A + + YK G N+ KTV
Sbjct: 1 NCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSG-------------LANK------KTV 41
Query: 71 TIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQPDL 126
TIQP GKD VVL+TTKTKKQN P L HKSVM+ E +MAK + N+V DNYY+PDL
Sbjct: 42 TIQPSGGKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDL 99
>gi|238007246|gb|ACR34658.1| unknown [Zea mays]
gi|413946287|gb|AFW78936.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 117
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 68/118 (57%), Gaps = 14/118 (11%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
MATV G LIW++V+KNN FLVK+FG G+A +F + G
Sbjct: 1 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKV---------QFTKEPNNLYNIHSFKHSGL 51
Query: 61 RGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRV 117
KK TVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK + N+V
Sbjct: 52 ANKK----TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQV 105
>gi|413946288|gb|AFW78937.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 134
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 67/117 (57%), Gaps = 14/117 (11%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
MATV G LIW++V+KNN FLVK+FG G+A +F + G
Sbjct: 1 MATVPGDLIWQVVRKNNSFLVKQFGNGNAKV---------QFTKEPNNLYNIHSFKHSGL 51
Query: 61 RGKKIKLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANR 116
KK TVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK + N+
Sbjct: 52 ANKK----TVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQ 104
>gi|115449773|ref|NP_001048549.1| Os02g0821200 [Oryza sativa Japonica Group]
gi|113538080|dbj|BAF10463.1| Os02g0821200, partial [Oryza sativa Japonica Group]
Length = 92
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 69 TVTIQP--GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQPDL 126
TVTIQP GKD VVL+TTKTKKQN P L HKSVM+ E +MAK + N+V DNYY+PDL
Sbjct: 1 TVTIQPSGGKDAAVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDL 60
>gi|413946294|gb|AFW78943.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 173
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 69/139 (49%), Gaps = 43/139 (30%)
Query: 12 IVKKNNCFLVKEFGRGSA------SAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGKKI 65
+V+KNN FLVK+FG G+A + + +K G N+
Sbjct: 25 VVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSG-------------LANK---- 67
Query: 66 KLKTVTIQPG-KDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIAN--------- 115
KTVTIQP KD VVL+TTKTKKQN P L HKSVM+ E +MAK + N
Sbjct: 68 --KTVTIQPAAKDSAVVLSTTKTKKQNAPAKLSHKSVMRKEFRKMAKAVKNQPHLIAEKS 125
Query: 116 --------RVGDNYYQPDL 126
+V DNYY+PDL
Sbjct: 126 NLHFVFALQVSDNYYRPDL 144
>gi|168000679|ref|XP_001753043.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695742|gb|EDQ82084.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 138
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 69/135 (51%), Gaps = 25/135 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRG------SASAHAVITCSVYKFGGRKIECSTFVF 54
MA V LIW +VK +N FLVK G S+ + + + +K+ G
Sbjct: 1 MAAVSDDLIWLLVKNSNRFLVKRNGNNNNSVTFSSEPNNLYNLNTFKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIA 114
N+ KTV I P + VVL TTKTKK+N+P L H S++K + +MAK +
Sbjct: 51 ---LANK------KTVAIAPAEGLSVVLTTTKTKKRNQPAKLRHNSLLKKDFRKMAKTVV 101
Query: 115 NRVGDNYYQPDLKNA 129
N+V N Y+ DLK+A
Sbjct: 102 NQVASNGYRADLKSA 116
>gi|168007127|ref|XP_001756260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692770|gb|EDQ79126.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 138
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 25/135 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRG------SASAHAVITCSVYKFGGRKIECSTFVF 54
MA V LIW +VK +N FLVK G S+ + + + +K+ G
Sbjct: 1 MAAVSDDLIWLLVKNSNRFLVKRNGNNNNSVTFSSEPNNLYNLNTFKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIA 114
N+ K+V I P + VVL TTKTKK+N+P L H S++K + +MAK +
Sbjct: 51 ---LANK------KSVAIAPAEGLSVVLTTTKTKKRNQPAKLRHNSLLKKDFRKMAKTVV 101
Query: 115 NRVGDNYYQPDLKNA 129
N+V N Y+ DLK+A
Sbjct: 102 NQVASNGYRADLKSA 116
>gi|168067582|ref|XP_001785691.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662661|gb|EDQ49486.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
MA V L W +VK NN FLVK G S S +F + G
Sbjct: 1 MAAVSDDLTWLLVKNNNRFLVKMNGNNSNS---------VQFSSEPNNLYNLNTFKHSGL 51
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDN 120
KK TV I P + V+L TTKTKK+++P H S++K + +MAK + N+V N
Sbjct: 52 ANKK----TVAIAPSEGLSVLLTTTKTKKRSQPAKSSHNSLLKKDFRKMAKAVVNQVATN 107
Query: 121 YYQPDLKNAV 130
Y+ DLK+A
Sbjct: 108 GYRADLKSAA 117
>gi|302755534|ref|XP_002961191.1| hypothetical protein SELMODRAFT_164298 [Selaginella moellendorffii]
gi|302766786|ref|XP_002966813.1| hypothetical protein SELMODRAFT_270600 [Selaginella moellendorffii]
gi|300164804|gb|EFJ31412.1| hypothetical protein SELMODRAFT_270600 [Selaginella moellendorffii]
gi|300172130|gb|EFJ38730.1| hypothetical protein SELMODRAFT_164298 [Selaginella moellendorffii]
Length = 138
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 26/131 (19%)
Query: 7 QLIWEIVKKNNCFLVKEFGRGSAS------AHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
LIW +VK +N FLVK G SAS + + + YK+ G N
Sbjct: 5 DLIWLLVKNSNKFLVKRNGNSSASVQFSSEPNNLYNLNTYKYSG-------------LAN 51
Query: 61 RGKKIKLKTVTIQP-GKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD 119
+ KTV + P G+ +VL TTK KK NKP + L++S++K AKVI N+VGD
Sbjct: 52 K------KTVAVAPAGEKMDIVLTTTKKKKSNKPASYLNRSLLKSNFKNKAKVIINQVGD 105
Query: 120 NYYQPDLKNAV 130
N Y+PDLK A
Sbjct: 106 NGYRPDLKRAA 116
>gi|168070442|ref|XP_001786812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660420|gb|EDQ48374.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 117
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRG------SASAHAVITCSVYKFGGRKIECSTFVF 54
MA V LIW +VK +N FLVK G S+ + + + +K+ G
Sbjct: 1 MAAVSDDLIWLLVKNSNRFLVKRNGNNNNSVTFSSEPNNLYNLNTFKYSG---------- 50
Query: 55 GRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIA 114
N+ K+V I P + VVL TTKTKK+N+P L H S++K + +MAK +
Sbjct: 51 ---LANK------KSVAIAPAEGLSVVLTTTKTKKRNQPAKLRHNSLLKKDFRKMAKTVV 101
Query: 115 NRV 117
N+V
Sbjct: 102 NQV 104
>gi|168030930|ref|XP_001767975.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680817|gb|EDQ67250.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 138
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
MA+V LIW +VK +N FLVK G + S +F ++ G
Sbjct: 1 MASVSDDLIWLLVKDSNRFLVKRNGNNNNSV---------QFSSEPNNLYNLNTFKYSGL 51
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDN 120
KK TV I P + V L TTKTKK+N+P LH S++K + +MAK + N+V N
Sbjct: 52 ANKK----TVAIAPNEGLSVTLTTTKTKKRNQPAKALHNSLLKKDFRKMAKTVVNQVATN 107
Query: 121 YYQPDLKNA 129
Y+ DLK+A
Sbjct: 108 DYRADLKSA 116
>gi|223994675|ref|XP_002287021.1| RL28, ribosomal protein 28 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|220978336|gb|EED96662.1| RL28, ribosomal protein 28 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 134
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
M + L WE+VK+NN F+ K+ GS +T SV + G + S++ + +
Sbjct: 1 MVAISDSLAWELVKRNNSFMRKK--SGSTRRSGAVTFSVER--GNLVSKSSYKYSGLASS 56
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSV-MKHEIHRMAKVIANRVGD 119
KT+ I P D L T KTKK S+ + RM K I ++ D
Sbjct: 57 -------KTIDISPTDDNRASL-TLKTKKAGTSGKSGKASIALNKNFRRMEKTIKSQATD 108
Query: 120 NYYQPDLKN 128
NYY+PDLK+
Sbjct: 109 NYYRPDLKS 117
>gi|76573315|gb|ABA46762.1| unknown [Solanum tuberosum]
Length = 64
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 93 PIALLHKSVMKHEIHRMAKVIANRVGDNYYQPDLKNAV 130
P +LL+KSVMK E RMAK + N+VGDNYY+PDLK A
Sbjct: 2 PSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRPDLKKAA 39
>gi|397587168|gb|EJK53834.1| hypothetical protein THAOC_26649 [Thalassiosira oceanica]
Length = 156
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
M L+WE+VK NN F+ K+ GR S S I SV + G S++ + +
Sbjct: 1 MVAAADSLVWELVKNNNSFMRKKSGRTSRSGS--IRFSVER--GNLTNKSSYKYSGLANS 56
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKS-----VMKHEIHRMAKVIAN 115
KT+ I D L T KTKK A KS + + R K I +
Sbjct: 57 -------KTIDISSVGDNKAAL-TLKTKK----AATSGKSGKTEIALNKDFRRSEKTIKS 104
Query: 116 RVGDNYYQPDLKNAV 130
+ DNYY+PDLK+A
Sbjct: 105 QATDNYYRPDLKSAA 119
>gi|378730837|gb|EHY57296.1| ribosomal protein L28e [Exophiala dermatitidis NIH/UT8656]
Length = 152
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 33/135 (24%)
Query: 2 ATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTF-VFGRFCGN 60
+ + G LIWE+V+ NN FLVK R SA GG + F + +
Sbjct: 5 SNISGDLIWEVVRNNNSFLVK---RSSA-------------GGVQFSRDPFNLVNKHSRK 48
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANR---- 116
+ K V++Q + V L T K K NKP + +H +H K ++NR
Sbjct: 49 HEGFVNDKAVSVQANEKGGVTLKTKKPGKANKPAS-------QHNVHAYGKTVSNRKLYK 101
Query: 117 -----VGDNYYQPDL 126
VG N Y+ DL
Sbjct: 102 NIADAVGKNSYRADL 116
>gi|413948281|gb|AFW80930.1| hypothetical protein ZEAMMB73_436369 [Zea mays]
Length = 73
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSA 29
MATV G LIW+IV+KNN FLVK+FG G+A
Sbjct: 1 MATVPGDLIWQIVRKNNSFLVKQFGNGNA 29
>gi|299471186|emb|CBN79042.1| 60S ribosomal protein L28, putative [Ectocarpus siliculosus]
Length = 157
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGG-RKIECSTFVFGRFCG 59
M V +L+W +V++N CFL K G+ S V+T +CS + G
Sbjct: 1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKVVLTAEPNNLTNVNSYKCSGLANSKAVG 60
Query: 60 NRGKKIKLKTVTIQPGKDQVVVLATTKTKKQ-NKPIALLHKSVMKHEIHRMAKVIANRVG 118
I+ + KD+ T K+ K +KP + +S++K +++ I + G
Sbjct: 61 -----IQF----AKDAKDRPCAAMTLKSSKNGSKPKKSVGRSLLKKTHPSVSQAIMKQTG 111
Query: 119 DNYYQPDLKNAV 130
Y+PDL++A
Sbjct: 112 GTNYRPDLQHAA 123
>gi|402086835|gb|EJT81733.1| ribosomal protein L28e [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 149
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 35/141 (24%)
Query: 1 MATVGGQLIWEIVKKNNCFLVK-------EFGRGSASAHAVITCSVYKFGGRKIECSTFV 53
M+ V LIWE+V+ N FL K +F R + ++ K G
Sbjct: 1 MSNVSADLIWEVVRSQNAFLEKRKTGGGIQFSRDPMN---LVNKHSRKHAG--------- 48
Query: 54 FGRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMA--- 110
F N K + +Q G+ VV+ + K NKP + L S + H ++ A
Sbjct: 49 ---FVNN-------KAIGVQAGEKGAVVVTSKKADAANKPASQL--SSVAHSGNKNARST 96
Query: 111 -KVIANRVGDNYYQPDLKNAV 130
K +ANR + Y+PDL+ A
Sbjct: 97 YKAVANRTAKSGYRPDLRQAA 117
>gi|156390843|ref|XP_001635479.1| predicted protein [Nematostella vectensis]
gi|156222573|gb|EDO43416.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRG-SASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRG 62
+ L W I++ N+CFLV+ G+ + + V + +K+ G V + G
Sbjct: 1 MSSDLQWSIIRNNSCFLVRSQGKTLTKEPNNVTGLNAFKYNG-------LVNKKVVG--- 50
Query: 63 KKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYY 122
V P + VV+ T K K NKP +++K + + R K I NYY
Sbjct: 51 -------VDAAPS-GKGVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYY 102
Query: 123 QPDLKN 128
+ DLK+
Sbjct: 103 RMDLKD 108
>gi|19114036|ref|NP_593124.1| ribosomal L28e protein family domain-containing protein
[Schizosaccharomyces pombe 972h-]
gi|3219966|sp|O14069.1|RL28E_SCHPO RecName: Full=Probable 60S ribosomal protein L28e
gi|4106660|emb|CAA22600.1| 60S ribosomal protein L28/L44 (predicted) [Schizosaccharomyces
pombe]
Length = 134
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 3 TVGGQLIWEIVKKNNCFLVK--EFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
+V LIW++++ NN FLVK EFG +F + S RF G
Sbjct: 2 SVSNDLIWQVIRDNNRFLVKRPEFG-------------GIQFNREPVNVSGKNAQRFSG- 47
Query: 61 RGKKIKLKTVTIQPGKDQVVVLAT-TKTKKQNKPIALLHKSVMKHEIHRMA-KVIANRVG 118
K V +Q + VVL T T K KP L K V+ + R K IA R+G
Sbjct: 48 ---LCNDKAVGVQANSPRGVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIG 104
Query: 119 DNYYQPDL 126
Y+ DL
Sbjct: 105 RTGYRDDL 112
>gi|452982550|gb|EME82309.1| hypothetical protein MYCFIDRAFT_183074 [Pseudocercospora fijiensis
CIRAD86]
Length = 153
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 18/126 (14%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGK 63
+ LIWE+ + NN FLVK G +F + + ++ G
Sbjct: 7 LSNDLIWEVTRSNNSFLVKRKQSGGV-----------QFSRDPLNLTNKHSRKYSG---- 51
Query: 64 KIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEI--HRMAKVIANRVGDNY 121
+ + IQP D V L T K N+P H S K ++ K I N
Sbjct: 52 YANAQAIGIQPD-DNTVTLTTKLPKNSNRPAKSYHTSSFKSSTPSRKLYKSIVNSTAKKG 110
Query: 122 YQPDLK 127
Y+PDL+
Sbjct: 111 YRPDLR 116
>gi|224088557|ref|XP_002308473.1| predicted protein [Populus trichocarpa]
gi|222854449|gb|EEE91996.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 21/26 (80%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGR 26
MATV GQ IWE VKKNN FLVK+F R
Sbjct: 1 MATVPGQRIWEEVKKNNSFLVKQFRR 26
>gi|219113605|ref|XP_002186386.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583236|gb|ACI65856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 152
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
M V QL+WE++KK +CFL K+ G S I+ SV K G K + ++ G
Sbjct: 1 MVHVPDQLVWELIKKQSCFLKKKNGNTKRSGS--ISFSVEK-GNLK----SLNLLKYNGL 53
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDN 120
K + V + Q+V + +K N P + + + R VI + D
Sbjct: 54 ANSKT-IDVVCTSENRAQLVTKSASKA--DNSPSKTFATNNINKDFRRAENVILKQTTDV 110
Query: 121 YYQPDLKNAV 130
YY+ DLK A
Sbjct: 111 YYRRDLKAAA 120
>gi|332375963|gb|AEE63122.1| unknown [Dendroctonus ponderosae]
Length = 137
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 23/131 (17%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRG---SASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
+ L+W I++ NN FLVK+ S + + + Y++ G
Sbjct: 1 MSSHLVWSIIRNNNAFLVKKRNISKPFSTEPNNLTNLNSYRYNGL--------------- 45
Query: 61 RGKKIKLKTVTIQPGKDQV-VVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD 119
+ KT+ I G D+ L K KKQNKP L K K + R + N +
Sbjct: 46 ----VHKKTLAIADGPDRKGFTLTYKKAKKQNKPRQNLVKRTFKSKPRRSLYKLKNFMQA 101
Query: 120 NYYQPDLKNAV 130
N Y+ DL A
Sbjct: 102 NKYRTDLTKAA 112
>gi|367050976|ref|XP_003655867.1| hypothetical protein THITE_2120064 [Thielavia terrestris NRRL 8126]
gi|347003131|gb|AEO69531.1| hypothetical protein THITE_2120064 [Thielavia terrestris NRRL 8126]
Length = 152
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
M+ V LIWEI + +N FLVK R S +A +F + + ++ G
Sbjct: 1 MSNVSADLIWEISRTSNAFLVK---RKSGAAP--------QFSRDPLNLTNVHSRKYAGF 49
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSV--MKHEIHRMAKVIANRVG 118
+ K + I P + V + + K NKP + L+ + K +AN+V
Sbjct: 50 ----VNDKALGIVPNEKGGVRVISKKPASVNKPASSLYTVTYGANKTARKTYKAVANQVA 105
Query: 119 DNYYQPDLK 127
N Y+PDL+
Sbjct: 106 KNGYRPDLR 114
>gi|408391750|gb|EKJ71118.1| hypothetical protein FPSE_08624 [Fusarium pseudograminearum CS3096]
Length = 159
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 20/133 (15%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
++ + LIWEIV+ NNCF K G +F + + + G
Sbjct: 7 LSNISSDLIWEIVRDNNCFSAKSKKNGG-----------VQFSRDPLNLTNKSSRKHAG- 54
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKP---IALLHKSVMKHEIHRMAKVIANRV 117
+ K V I G+ VV+ TTK + NKP I S K + + +AN+V
Sbjct: 55 ---FVNDKAVGIAAGEKGAVVV-TTKKAQPNKPAQNITTTSYSGSKSN-RKTYQAVANQV 109
Query: 118 GDNYYQPDLKNAV 130
N Y+ DL++A
Sbjct: 110 AKNSYRADLRSAA 122
>gi|46111243|ref|XP_382679.1| hypothetical protein FG02503.1 [Gibberella zeae PH-1]
Length = 159
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 20/133 (15%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
++ + LIWEIV+ NNCF K G +F + + + G
Sbjct: 7 LSNISSDLIWEIVRDNNCFSAKSKKNGG-----------VQFSRDPLNLTNKSSRKHAG- 54
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKP---IALLHKSVMKHEIHRMAKVIANRV 117
+ K V I G+ VV+ TTK + NKP I S K + + +AN+V
Sbjct: 55 ---FVNDKAVGIAAGEKGAVVV-TTKKAQPNKPAQNITTTSYSGSKSN-RKTYQAVANQV 109
Query: 118 GDNYYQPDLKNAV 130
N Y+ DL++A
Sbjct: 110 AKNSYRADLRSAA 122
>gi|340905317|gb|EGS17685.1| putative 60S ribosomal protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 147
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 21/131 (16%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKE-FGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCG 59
M+ V LIWE+ + N FLVK+ G S A + K G FV + G
Sbjct: 1 MSNVSADLIWEVSRNYNSFLVKQRTGTFSRDALNLTNQHSRKHAG-------FVNDKALG 53
Query: 60 NRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD 119
I P + V V+A K K NKP + L+ K + K IA++
Sbjct: 54 ------------IVPAEKGVKVIA-KKVKAANKPASSLYTVTYKSTARKAYKAIASQAAK 100
Query: 120 NYYQPDLKNAV 130
+ Y+ DL+ A
Sbjct: 101 HGYRADLRQAA 111
>gi|452841110|gb|EME43047.1| hypothetical protein DOTSEDRAFT_35388 [Dothistroma septosporum
NZE10]
Length = 153
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 23/133 (17%)
Query: 1 MATVG----GQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGR 56
MAT G LIWEI + NN FLVK G V K RK E +V +
Sbjct: 1 MATGGENISNDLIWEITRGNNAFLVKRKQAGGVQFSRDPLNLVNKH-SRKYEG--YVNAQ 57
Query: 57 FCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHE--IHRMAKVIA 114
G IQP D + TTKTK NKP L S ++ K +
Sbjct: 58 AIG------------IQP--DSNTIALTTKTKSANKPAQLYQTSSFNASTPTRKLYKSVV 103
Query: 115 NRVGDNYYQPDLK 127
N Y+ DL+
Sbjct: 104 NSTAKKGYRSDLR 116
>gi|164661161|ref|XP_001731703.1| hypothetical protein MGL_0971 [Malassezia globosa CBS 7966]
gi|159105604|gb|EDP44489.1| hypothetical protein MGL_0971 [Malassezia globosa CBS 7966]
Length = 151
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 23/124 (18%)
Query: 8 LIWEIVKKNNCFLVKEFGRG---SASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGKK 64
L W +V+K+N FLVK+ G G S V + YK G ++G
Sbjct: 6 LQWLLVRKSNSFLVKQKGLGRVFSREPGNVASLHSYKHSG------------LVNDKG-- 51
Query: 65 IKLKTVTIQPGKDQVVVLATTKTKKQNKPI-ALLHKSVMKHEIHRMAKVIANRVGDNYYQ 123
V I P +++ V++ T K K + I + ++ +K R+AK +AN V N Y+
Sbjct: 52 -----VGIVPAENRGVIITTRKQKVSPRAIRSARAQTTVKGGSRRVAKAVANIVAKNGYR 106
Query: 124 PDLK 127
DL+
Sbjct: 107 ADLR 110
>gi|213402443|ref|XP_002171994.1| 60S ribosomal protein L28/L44 [Schizosaccharomyces japonicus
yFS275]
gi|212000041|gb|EEB05701.1| 60S ribosomal protein L28/L44 [Schizosaccharomyces japonicus
yFS275]
Length = 133
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 15/125 (12%)
Query: 3 TVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRG 62
+V L+W++++ NN FLVK G +F + + RF G
Sbjct: 2 SVSNDLVWQVIRDNNKFLVKRSDFGG-----------IQFNREPLNATGKNAQRFSGLAS 50
Query: 63 KKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVM-KHEIHRMAKVIANRVGDNY 121
K G V ++ T K KP L V K + K IANRV N
Sbjct: 51 DKAAGVVANSPRG---VALITKTGVKNAQKPAKLYRTDVFAKSSTRKTYKAIANRVAKNG 107
Query: 122 YQPDL 126
Y+ DL
Sbjct: 108 YRTDL 112
>gi|342884667|gb|EGU84872.1| hypothetical protein FOXB_04653 [Fusarium oxysporum Fo5176]
Length = 159
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 18/132 (13%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
++ + LIWEIV+ NNCF K G +F + + + G
Sbjct: 7 LSNISSDLIWEIVRDNNCFSAKSKKNGG-----------VQFSRDPLNLTNKTSRKHAG- 54
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVM--KHEIHRMAKVIANRVG 118
+ K + I G+ +V+ T+K + NKP L K+ + + +AN+
Sbjct: 55 ---FVNDKALGISSGEKGAIVV-TSKKAQPNKPAQNLVKTSYSGSKSNRKTYQAVANQAA 110
Query: 119 DNYYQPDLKNAV 130
N Y+ DL++A
Sbjct: 111 KNGYRADLRSAA 122
>gi|302892811|ref|XP_003045287.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726212|gb|EEU39574.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 158
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
+ + L+WEIV+ NN F K G +F + + + G
Sbjct: 6 LPNISSDLVWEIVRNNNSFSAKSKKNGG-----------VQFSRDPLNLTNISSRKHAG- 53
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHK---SVMKHEIHRMAKVIANRV 117
+ K V I G+ VV+ TTK + NKP + S +K + + +AN+V
Sbjct: 54 ---FVNDKAVGISVGEKGEVVV-TTKKAQPNKPAQNTTQTSYSAVKSN-RKTYQAVANQV 108
Query: 118 GDNYYQPDLKNAV 130
N Y+PDL+ A
Sbjct: 109 AKNSYRPDLRAAA 121
>gi|158294176|ref|XP_315433.4| AGAP005427-PA [Anopheles gambiae str. PEST]
gi|157015443|gb|EAA10888.5| AGAP005427-PA [Anopheles gambiae str. PEST]
Length = 157
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 16/127 (12%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGK 63
L W IV+ +N FL+K I G S+F R+ G
Sbjct: 2 ASSHLNWLIVRDHNAFLLKRRD---------IRKPFSTEPGNLTNLSSF---RYSG---- 45
Query: 64 KIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQ 123
+ KT+TI P + + V + K NKP K +K R K IAN + N Y+
Sbjct: 46 LVHHKTITITPAEKKGVNFVYNRKKVLNKPAKAPVKVTLKEGPRRTLKKIANMMKANRYR 105
Query: 124 PDLKNAV 130
DL+ A
Sbjct: 106 ADLRGAA 112
>gi|157118570|ref|XP_001653203.1| ribosomal protein L28, putative [Aedes aegypti]
gi|157118572|ref|XP_001653204.1| ribosomal protein L28, putative [Aedes aegypti]
gi|94468574|gb|ABF18136.1| ribosomal protein L28 [Aedes aegypti]
gi|108875657|gb|EAT39882.1| AAEL008353-PB [Aedes aegypti]
gi|108875658|gb|EAT39883.1| AAEL008353-PA [Aedes aegypti]
Length = 152
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 23/133 (17%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFG---RGSASAHAVITCSVYKFGGRKIECSTFVFGRF 57
MA L W I++ +N FL+K S + + S Y++ G V +
Sbjct: 1 MADTSSHLSWLIIRDHNAFLLKRRNIKKPFSTEPNNLTNLSSYRYSG-------LVHKKS 53
Query: 58 CGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRV 117
G + P D+ + + + K Q KP K +KH R K + N V
Sbjct: 54 LG------------VVPA-DKGIQVVYKRPKFQTKPAKATVKVTLKHRPRRTLKKLKNIV 100
Query: 118 GDNYYQPDLKNAV 130
N Y+ DL+ A
Sbjct: 101 NKNRYRRDLRQAA 113
>gi|428179118|gb|EKX47990.1| large subunit ribosomal protein L28e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 140
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 27/136 (19%)
Query: 2 ATVGGQLIWEIVKKNNCFLVK-EFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
A L+W + + N+ FLVK E GR I+ S F N
Sbjct: 3 ANTSADLLWMLTRSNSSFLVKRESGR--------------------IQLSKDPFNLMNKN 42
Query: 61 RGKKIKL---KTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRV 117
K L K+ I+ +++ +VL T TK P + K V + R K +AN V
Sbjct: 43 SFKYSGLANGKSADIRQYENKGIVLTTKLTKAATSPAKSVRKVVCSRDFERNFKKVANCV 102
Query: 118 GDN---YYQPDLKNAV 130
YY+PDL+ +
Sbjct: 103 SKTVGGYYRPDLEKSA 118
>gi|59895928|gb|AAX11340.1| ribosomal protein L28 [Haliotis asinina]
Length = 135
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGK 63
+ L W I++ N+ FL+K G +T S K + I ++F R+ G
Sbjct: 1 MSADLQWMIIRNNSSFLLKRPG---------LTISTKKNNLKGI--NSF---RYNG---- 42
Query: 64 KIKLKTVTIQPGKD-QVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYY 122
I+ KTV ++P KD + VVL T + KP + +K + R I + N Y
Sbjct: 43 LIRKKTVGVEPAKDGKGVVLVTRNSTGGRKPNKSFTRVELKRDPRRTFATIRKTIRRNKY 102
Query: 123 QPDLKNA 129
+ DLK A
Sbjct: 103 RKDLKMA 109
>gi|170044970|ref|XP_001850099.1| ribosomal protein L28 [Culex quinquefasciatus]
gi|167868043|gb|EDS31426.1| ribosomal protein L28 [Culex quinquefasciatus]
Length = 157
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 23/133 (17%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFG---RGSASAHAVITCSVYKFGGRKIECSTFVFGRF 57
MA L W I++ +N FL+K S + + S +++ G
Sbjct: 1 MADSSSHLNWLIIRDHNAFLLKRRNIRKPFSTEPNNLTNLSSFRYSG------------- 47
Query: 58 CGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRV 117
+ K++ I P D+ + + + K Q KP K +KH+ R K + N +
Sbjct: 48 ------LVHKKSLGIVPA-DKGISVVYKRPKYQTKPAKATVKVTLKHKPRRALKKLKNII 100
Query: 118 GDNYYQPDLKNAV 130
N Y+ DL+ A
Sbjct: 101 NGNRYRRDLRQAA 113
>gi|367026814|ref|XP_003662691.1| hypothetical protein MYCTH_2315051 [Myceliophthora thermophila ATCC
42464]
gi|347009960|gb|AEO57446.1| hypothetical protein MYCTH_2315051 [Myceliophthora thermophila ATCC
42464]
Length = 149
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 1 MATVGGQLIWEIVKKNNCFLVK-EFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCG 59
M+ V LIWE+ + N +LVK + G+ S + K+ G F
Sbjct: 1 MSNVSADLIWEVSRLQNSYLVKTKTGQFSRDPLNLTNLHSRKYAG------------FAN 48
Query: 60 NRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVM--KHEIHRMAKVIANRV 117
+ K + I P + V + + K NKP + L+ + + +AN+
Sbjct: 49 D-------KAIGISPNEKGGVKVISKKPAATNKPASSLYTVTYGGNKTSRKTYRAVANQA 101
Query: 118 GDNYYQPDL 126
N Y+PDL
Sbjct: 102 AKNGYRPDL 110
>gi|91078314|ref|XP_972745.1| PREDICTED: similar to ribosomal protein L28e [Tribolium castaneum]
gi|270003956|gb|EFA00404.1| hypothetical protein TcasGA2_TC003255 [Tribolium castaneum]
Length = 137
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 23/131 (17%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRG---SASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
+ L+W I++ NN FL K+ G S + + S Y++ G
Sbjct: 1 MSAHLVWSIIRNNNAFLRKKRNIGKPFSTEPNNLTNLSSYRYNGL--------------- 45
Query: 61 RGKKIKLKTVTIQPGKDQV-VVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD 119
I KTV I D+ + K KQNKP + K MK R + +
Sbjct: 46 ----IHKKTVGIVDAPDKKGFTVVYKKASKQNKPRQCIVKRTMKSGPRRSLAKLERLLKA 101
Query: 120 NYYQPDLKNAV 130
N Y+ DL A
Sbjct: 102 NKYRTDLSKAA 112
>gi|340518598|gb|EGR48839.1| hypothetical protein TRIREDRAFT_33692 [Trichoderma reesei QM6a]
Length = 147
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 23/136 (16%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
+ + LIWE+V+ NN +L K G+A V +F + ++ G
Sbjct: 1 LPNISSDLIWEVVRTNNSYLHKT---GAARNGGV------QFSRDPLNLKNVHSRKYAGF 51
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEI------HRMAKVIA 114
+ K V + P + VVL T K +P KSV K I + K +A
Sbjct: 52 ----VNDKAVGVLPNEKGGVVLVTKKPAAVTQP----SKSVAKTTIGGGKSTRKTYKAVA 103
Query: 115 NRVGDNYYQPDLKNAV 130
++V Y+PDL+ A
Sbjct: 104 SQVAKTGYRPDLRAAA 119
>gi|119196413|ref|XP_001248810.1| hypothetical protein CIMG_02581 [Coccidioides immitis RS]
gi|303322392|ref|XP_003071189.1| 60S ribosomal protein L28, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110888|gb|EER29044.1| 60S ribosomal protein L28, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040612|gb|EFW22545.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392861974|gb|EAS37423.2| hypothetical protein CIMG_02581 [Coccidioides immitis RS]
Length = 157
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 3 TVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRG 62
V L+WEIV+ N FLV G A T T + F N
Sbjct: 8 NVSEDLVWEIVRSQNSFLVNRKSGGGAR----FTRDPLNL----TNVHTRKYSGFSSN-- 57
Query: 63 KKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIH--RMAKVIANRVGDN 120
K V IQ ++ + ++T + N+P + + + H ++ K +ANRV
Sbjct: 58 -----KAVGIQAAENNGLTVSTKRPGNPNQPAKNVVNTPISGTSHNRKVYKGVANRVVLG 112
Query: 121 YYQPDLK 127
Y+PDL+
Sbjct: 113 GYRPDLR 119
>gi|389583962|dbj|GAB66696.1| 60S ribosomal protein L28 [Plasmodium cynomolgi strain B]
Length = 127
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKE 23
M+ V LIWE+ KKNNCFL K
Sbjct: 1 MSNVSNALIWELTKKNNCFLKKN 23
>gi|221056578|ref|XP_002259427.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809498|emb|CAQ40200.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 126
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKE 23
M+ V LIWE+ KKNNCFL K
Sbjct: 1 MSNVSNALIWELTKKNNCFLKKN 23
>gi|389632401|ref|XP_003713853.1| ribosomal protein L28e [Magnaporthe oryzae 70-15]
gi|351646186|gb|EHA54046.1| ribosomal protein L28e [Magnaporthe oryzae 70-15]
gi|440473353|gb|ELQ42156.1| hypothetical protein OOU_Y34scaffold00228g47 [Magnaporthe oryzae
Y34]
gi|440489424|gb|ELQ69080.1| hypothetical protein OOW_P131scaffold00195g47 [Magnaporthe oryzae
P131]
Length = 151
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
M+ V LIWE+V+ N FL K G +F + + ++ G
Sbjct: 1 MSNVSADLIWEVVRNQNAFLEKRNTNGG-----------VQFSRDPLNLTNKHSRKYAG- 48
Query: 61 RGKKIKLKTVTIQPGKDQV--VVLATTKTKKQNKPIALLHKSVMK-HEIHRMA-KVIANR 116
+ K + +Q ++ V + + K NKP + + + H+ +R K +AN+
Sbjct: 49 ---FVNDKAIGVQASSNEKGGVAITSKKAGAGNKPASSQTTTTFRPHKNNRSTFKAVANQ 105
Query: 117 VGDNYYQPDLKNAV 130
N Y+ DL+ A
Sbjct: 106 TAKNGYRADLRQAA 119
>gi|156099071|ref|XP_001615538.1| 60S ribosomal protein L28 [Plasmodium vivax Sal-1]
gi|148804412|gb|EDL45811.1| 60S ribosomal protein L28, putative [Plasmodium vivax]
Length = 127
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKE 23
M+ V LIWE+ KKNNCFL K
Sbjct: 1 MSNVSNALIWELTKKNNCFLKKN 23
>gi|68075069|ref|XP_679451.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500207|emb|CAH98433.1| conserved hypothetical protein [Plasmodium berghei]
Length = 74
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
MA + G L+WE+ K NNCFL R + C Y + + S+ +
Sbjct: 1 MANISGALVWELTKNNNCFL----KRNKTGKKEKLLCDPYNLRCKNTKNSSGL------- 49
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKK 89
+ V I+ K +VV+ + TKK
Sbjct: 50 ----VNDNAVNIRLNKGKVVLCVKSTTKK 74
>gi|322711959|gb|EFZ03532.1| 60S ribosomal protein L28 [Metarhizium anisopliae ARSEF 23]
Length = 148
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 25/132 (18%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
++ + L+WEIV+ NNCFL K + GG F N
Sbjct: 6 LSNMSSDLVWEIVRNNNCFLSKS----------------NRNGG-------VQFSHDPLN 42
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSV--MKHEIHRMAKVIANRVG 118
K K V I P + V + + KT KP K+ + K +AN
Sbjct: 43 LTNKNTRKAVGIIPNEKGGVTVISKKTTDATKPAKAFIKTTHGANKSSRKTYKAVANLTA 102
Query: 119 DNYYQPDLKNAV 130
+ Y+ DL++A
Sbjct: 103 KSGYRSDLRSAA 114
>gi|156048490|ref|XP_001590212.1| hypothetical protein SS1G_08976 [Sclerotinia sclerotiorum 1980]
gi|154693373|gb|EDN93111.1| hypothetical protein SS1G_08976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 150
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 16/124 (12%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGK 63
V LIWE+ + N FLVK G ++ F + + ++ G
Sbjct: 5 VSADLIWEVTRSQNAFLVKRTTGGGST-----------FSRDPLNLTNKHSRKYAGF--- 50
Query: 64 KIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQ 123
+ K V + P ++ V L T KT KP + L K+ + +A V + Y+
Sbjct: 51 -VNDKAVGVVPA-EKGVTLITKKTSASQKPASSLTKTTFSKSGRKTFAGVAKTVAKDGYR 108
Query: 124 PDLK 127
DL+
Sbjct: 109 SDLR 112
>gi|70922814|ref|XP_734513.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56507325|emb|CAH84568.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 59
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 1 MATVGGQLIWEIVKKNNCFL 20
MA + G LIWE+ K NNCFL
Sbjct: 1 MANISGALIWELTKNNNCFL 20
>gi|400597081|gb|EJP64825.1| ribosomal L28e family protein [Beauveria bassiana ARSEF 2860]
Length = 156
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 1 MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGN 60
+ V LIW IV+ N+CFL K G A +F + + + G
Sbjct: 6 LNNVSSDLIWAIVRDNHCFLSKSRSNGGA-----------QFSSDPLNLTNKNTRKHAG- 53
Query: 61 RGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMK--HEIHRMAKVIANRVG 118
+ K + + PG+ + + + K KP K+ + + K +AN+
Sbjct: 54 ---FVNDKALGVIPGEKGGLTILSKTIKNSTKPAKAFSKTNISGAKSTRKAYKAVANQST 110
Query: 119 DNYYQPDLK-NAVE 131
N Y+ DL+ +AVE
Sbjct: 111 RNGYRADLRQHAVE 124
>gi|449684079|ref|XP_004210536.1| PREDICTED: 60S ribosomal protein L28-like [Hydra magnipapillata]
gi|449684081|ref|XP_002160937.2| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Hydra
magnipapillata]
Length = 133
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFGRG-SASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRG 62
+ +L W +++KN+CFLVK G + H + + +K+ G V + G
Sbjct: 1 MSAELCWSVLRKNSCFLVKSQGLTLTKEPHNLTGLNSFKYNG-------LVNKKTVG--- 50
Query: 63 KKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYY 122
VT GK V+ + K + Q + + ++K H M K I N++ N Y
Sbjct: 51 -------VTSNGGKGVVLTIRKKKLRGQKHYDSSI---LLKGSRHTM-KSIKNKLSSNSY 99
Query: 123 QPDL 126
+ DL
Sbjct: 100 RKDL 103
>gi|384494823|gb|EIE85314.1| ribosomal protein L28e [Rhizopus delemar RA 99-880]
Length = 139
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 22/125 (17%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFG-RGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRG 62
+ L+W IVK NN FLVK + S+ ++ + +K+ G N
Sbjct: 1 MSADLVWSIVKNNNSFLVKRQNVQFSSEPSNLLNLNSFKYSG-------------IAN-- 45
Query: 63 KKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD-NY 121
K I P V V K K+ P + V+ + AK +AN + N
Sbjct: 46 ----YKNAAIIPAARGVRV-TLRKANKEQSPAKSANTVVIAKTRRQTAKSVANLIARGNK 100
Query: 122 YQPDL 126
Y+PDL
Sbjct: 101 YRPDL 105
>gi|384246847|gb|EIE20336.1| ribosomal protein L28e [Coccomyxa subellipsoidea C-169]
Length = 150
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 26/133 (19%)
Query: 2 ATVGGQLIWEIVKKNNCFLVKEFGRGSASAHA--VITCSVYKFGGRKIECSTFVFGRFCG 59
A QL+W++VK NCFL K SA + + YK+ G E
Sbjct: 21 AMAPSQLVWQLVKNYNCFLHKGLNGSQFSAEPGNLYNLNSYKYSGIANE----------- 69
Query: 60 NRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD 119
K V ++ ++ + K NKP K+ K++ R A + R+G
Sbjct: 70 --------KIVHVEAAEEGSFAVTRNIPKNSNKPRDSRSKATKKNKNFRRAAI---RLGK 118
Query: 120 NYY--QPDLKNAV 130
+ +PDLK A
Sbjct: 119 EVHTVRPDLKKAA 131
>gi|451854360|gb|EMD67653.1| hypothetical protein COCSADRAFT_34442 [Cochliobolus sativus ND90Pr]
Length = 151
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 3 TVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRG 62
T+ L WEI K + LVK S + ++Y RK E S
Sbjct: 4 TISHDLAWEITKGRSSTLVKRANGVQFSRDPLNLRNIY---SRKNEGS------------ 48
Query: 63 KKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVM--KHEIHRMAKVIANRVGDN 120
I K + + PGKD V L T K K ++P + + + + I N
Sbjct: 49 --IANKAIGVIPGKDGGVTLLTKKADKHHQPASAIQTTTFGPSKSTRKTYSAIVNATTKR 106
Query: 121 YYQPDL-KNAV 130
Y+PDL K+AV
Sbjct: 107 NYRPDLRKDAV 117
>gi|384497881|gb|EIE88372.1| ribosomal protein L28e [Rhizopus delemar RA 99-880]
Length = 139
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 22/125 (17%)
Query: 4 VGGQLIWEIVKKNNCFLVKEFG-RGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRG 62
+ L+W IVK NN FLVK + S+ ++ + +K+ G N
Sbjct: 1 MSADLVWAIVKNNNSFLVKRQNVQFSSEPSNLLNLNSFKYSG-------------LAN-- 45
Query: 63 KKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGD-NY 121
K I P V V K K+ P + V+ + AK +AN + N
Sbjct: 46 ----YKNAAIIPAARGVRV-TLRKANKEQSPAKSANTVVIAKTRRQTAKSVANLIARGNK 100
Query: 122 YQPDL 126
Y+PDL
Sbjct: 101 YRPDL 105
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,995,753,918
Number of Sequences: 23463169
Number of extensions: 70328108
Number of successful extensions: 132062
Number of sequences better than 100.0: 119
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 131867
Number of HSP's gapped (non-prelim): 123
length of query: 131
length of database: 8,064,228,071
effective HSP length: 97
effective length of query: 34
effective length of database: 10,083,267,974
effective search space: 342831111116
effective search space used: 342831111116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)