Citrus Sinensis ID: 040088

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQPDLKNAVE
ccccccccEEEEEEcccEEEEEEcccccccccccEEccCEEEcccccCCccEEEccccccccccccccEEEEEEcccccEEEEEEccccccccccEEEEEEEcccHHHHHHHHHHHHccccccHHHHHHcc
****GGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQ*DL*****
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MATVGGQLIWEIVKKNNCFLVKEFGRGSASAHAVITCSVYKFGGRKIECSTFVFGRFCGNRGKKIKLKTVTIQPGKDQVVVLATTKTKKQNKPIALLHKSVMKHEIHRMAKVIANRVGDNYYQPDLKNAVE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
60S ribosomal protein L28-2 probableQ9M0E2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A18, chain O
Confidence level:very confident
Coverage over the Query: 4-44,57-130
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3iz5, chain B probable Alignment | Template Structure