BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040090
MASQQGRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMG
HRGGQMRREQMGSEGYQEMGRKGGLSTIDKSGGERAAEEGIEIDESKYKTSS

High Scoring Gene Products

Symbol, full name Information P value
EM1
AT3G51810
protein from Arabidopsis thaliana 3.7e-32
GEA6
AT2G40170
protein from Arabidopsis thaliana 5.2e-26
EMP1
Embryonic abundant protein 1
protein from Oryza sativa Japonica Group 1.4e-23

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040090
        (112 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2074383 - symbol:EM1 "AT3G51810" species:3702 ...   352  3.7e-32   1
TAIR|locus:2065041 - symbol:GEA6 "AT2G40170" species:3702...   294  5.2e-26   1
UNIPROTKB|P46520 - symbol:EMP1 "Embryonic abundant protei...   271  1.4e-23   1


>TAIR|locus:2074383 [details] [associations]
            symbol:EM1 "AT3G51810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=RCA;TAS] [GO:0009640 "photomorphogenesis"
            evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
            evidence=RCA;TAS] [GO:0009845 "seed germination" evidence=RCA]
            [GO:0009909 "regulation of flower development" evidence=RCA]
            [GO:0009933 "meristem structural organization" evidence=RCA]
            [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
            "sugar mediated signaling pathway" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825 "cotyledon
            development" evidence=RCA] [GO:0050826 "response to freezing"
            evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
            GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AF049236
            EMBL:Z11158 EMBL:Z11921 EMBL:BT004105 EMBL:BT005464 IPI:IPI00526670
            PIR:S34819 RefSeq:NP_190749.1 UniGene:At.35352 STRING:Q07187
            PaxDb:Q07187 PRIDE:Q07187 ProMEX:Q07187 EnsemblPlants:AT3G51810.1
            GeneID:824344 KEGG:ath:AT3G51810 TAIR:At3g51810 eggNOG:COG3729
            HOGENOM:HOG000201826 InParanoid:Q07187 OMA:SEQLGHE PhylomeDB:Q07187
            ProtClustDB:CLSN2683393 Genevestigator:Q07187 GermOnline:AT3G51810
            InterPro:IPR022377 InterPro:IPR000389 Pfam:PF00477 PROSITE:PS00431
            Uniprot:Q07187
        Length = 152

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 66/85 (77%), Positives = 77/85 (90%)

Query:     1 MASQQ-GRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEM 59
             MAS+Q  R+ELD +A+QGETVVPGGTGG SLEAQEHLAEGRS+GGQTR+EQLG EGYQE+
Sbjct:     1 MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query:    60 GHRGGQMRREQMGSEGYQEMGRKGG 84
             GH+GG+ R+EQ+G EGYQEMG KGG
Sbjct:    61 GHKGGEARKEQLGHEGYQEMGHKGG 85

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 46/87 (52%), Positives = 56/87 (64%)

Query:     5 QGRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMGHRGG 64
             Q RKE        E    GG   K     E   E   +GG+ R+EQLG EGYQEMGH+GG
Sbjct:    46 QTRKEQLGHEGYQEIGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGG 105

Query:    65 QMRREQMGSEGYQEMGRKGGLSTIDKS 91
             + R+EQ+G EGY+EMGRKGGLST++KS
Sbjct:   106 EARKEQLGHEGYKEMGRKGGLSTMEKS 132

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 39/79 (49%), Positives = 48/79 (60%)

Query:     6 GRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMGHRGGQ 65
             G   L+ +    E    GG   K     E   E   +GG+ R+EQLG EGYQEMGH+GG+
Sbjct:    27 GGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEIGHKGGEARKEQLGHEGYQEMGHKGGE 86

Query:    66 MRREQMGSEGYQEMGRKGG 84
              R+EQ+G EGYQEMG KGG
Sbjct:    87 ARKEQLGHEGYQEMGHKGG 105

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 25/58 (43%), Positives = 32/58 (55%)

Query:    23 GGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMGHRGGQMRREQMGSEGYQEMG 80
             GG   K     E   E   +GG+ R+EQLG EGY+EMG +GG    E+ G E  +E G
Sbjct:    84 GGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEMGRKGGLSTMEKSGGERAEEEG 141


>TAIR|locus:2065041 [details] [associations]
            symbol:GEA6 "AT2G40170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0048316 "seed development"
            evidence=IMP] [GO:0048700 "acquisition of desiccation tolerance in
            seed" evidence=IMP] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=RCA;TAS]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
            [GO:0009909 "regulation of flower development" evidence=RCA]
            [GO:0009933 "meristem structural organization" evidence=RCA]
            [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
            "sugar mediated signaling pathway" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0019915 "lipid storage" evidence=RCA] [GO:0050826 "response to
            freezing" evidence=RCA] GO:GO:0009737 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AF085279 HOGENOM:HOG000201826
            InterPro:IPR022377 InterPro:IPR000389 Pfam:PF00477 PROSITE:PS00431
            EMBL:Z11923 EMBL:Z11924 EMBL:X66023 EMBL:AF360157 EMBL:AY113885
            IPI:IPI00548376 PIR:S34802 RefSeq:NP_181546.1 UniGene:At.25587
            STRING:Q02973 PaxDb:Q02973 PRIDE:Q02973 ProMEX:Q02973
            EnsemblPlants:AT2G40170.1 GeneID:818608 KEGG:ath:AT2G40170
            TAIR:At2g40170 eggNOG:NOG319720 InParanoid:Q02973 OMA:GKSFEAQ
            PhylomeDB:Q02973 ProtClustDB:CLSN2913055 Genevestigator:Q02973
            GermOnline:AT2G40170 GO:GO:0048700 Uniprot:Q02973
        Length = 92

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 56/80 (70%), Positives = 67/80 (83%)

Query:     1 MASQQGRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMG 60
             MASQQ +K+LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTR+EQLGTEGYQ+MG
Sbjct:     1 MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query:    61 HRGGQMRREQMGSEGYQEMG 80
              +GG    ++ G E  +E G
Sbjct:    61 RKGGLSTGDKPGGEHAEEEG 80

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 32/85 (37%), Positives = 43/85 (50%)

Query:    28 KSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMGHRGGQMRREQMGSEGYQEMGRKGGLST 87
             K L+ +    E    GG   +     +   E   RGGQ R+EQ+G+EGYQ+MGRKGGLST
Sbjct:     8 KQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMGRKGGLST 67

Query:    88 IDKSXXXXXXXXXXXXXXSKYKTSS 112
              DK               SK++T +
Sbjct:    68 GDKPGGEHAEEEGVEIDESKFRTKT 92


>UNIPROTKB|P46520 [details] [associations]
            symbol:EMP1 "Embryonic abundant protein 1" species:39947
            "Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
            acid stimulus" evidence=IEP] GO:GO:0009737 EMBL:AC136221
            HOGENOM:HOG000201826 InterPro:IPR022377 InterPro:IPR000389
            Pfam:PF00477 PROSITE:PS00431 eggNOG:NOG319720 GO:GO:0048700
            EMBL:X63126 EMBL:U22102 PIR:S22483 RefSeq:NP_001055273.1
            UniGene:Os.12812 STRING:P46520 PRIDE:P46520
            EnsemblPlants:LOC_Os05g28210.1 GeneID:4338499
            KEGG:dosa:Os05t0349800-01 KEGG:osa:4338499 Gramene:P46520
            OMA:DIDESKY Uniprot:P46520
        Length = 95

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 51/71 (71%), Positives = 60/71 (84%)

Query:     4 QQGRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMGHRG 63
             QQGR ELD  AR+G+TVVPGGTGGKSLEAQE+LAEGRSRGGQTR+EQ+G EGY+EMG +G
Sbjct:     7 QQGRSELDRMAREGQTVVPGGTGGKSLEAQENLAEGRSRGGQTRKEQMGEEGYREMGRKG 66

Query:    64 GQMRREQMGSE 74
             G    ++ G E
Sbjct:    67 GLSTGDESGGE 77

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 39/88 (44%), Positives = 46/88 (52%)

Query:    27 GKSLEAQEHLAEGRS--RGGQTRREQLGTEGYQEMGHRGGQMRREQMGSEGYQEMGRKGG 84
             G+S E      EG++   GG   +     E   E   RGGQ R+EQMG EGY+EMGRKGG
Sbjct:     9 GRS-ELDRMAREGQTVVPGGTGGKSLEAQENLAEGRSRGGQTRKEQMGEEGYREMGRKGG 67

Query:    85 LSTIDKSXXXXXXXXXXXXXXSKYKTSS 112
             LST D+S              SKYKT S
Sbjct:    68 LSTGDESGGERAAREGIDIDESKYKTKS 95


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.306   0.126   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      112        98   0.00091  102 3  11 23  0.37    31
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  384 (41 KB)
  Total size of DFA:  75 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.74u 0.13s 9.87t   Elapsed:  00:00:01
  Total cpu time:  9.74u 0.13s 9.87t   Elapsed:  00:00:01
  Start:  Fri May 10 02:20:29 2013   End:  Fri May 10 02:20:30 2013

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