Query 040099
Match_columns 1236
No_of_seqs 857 out of 4473
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 05:07:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040099.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040099hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 2E-219 4E-224 1999.6 125.5 1188 44-1236 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 2E-176 5E-181 1743.4 149.0 1182 43-1235 43-1466(1466)
3 KOG0054 Multidrug resistance-a 100.0 4E-160 8E-165 1511.2 120.6 1121 76-1233 217-1374(1381)
4 PLN03130 ABC transporter C fam 100.0 1E-157 2E-162 1579.6 142.0 1133 63-1234 304-1474(1622)
5 PLN03232 ABC transporter C fam 100.0 5E-157 1E-161 1575.3 139.5 1131 63-1234 304-1471(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 6E-152 1E-156 1528.4 142.9 1140 64-1235 321-1521(1522)
7 PTZ00243 ABC transporter; Prov 100.0 3E-145 6E-150 1458.0 142.2 1141 63-1235 247-1547(1560)
8 TIGR01271 CFTR_protein cystic 100.0 1E-141 2E-146 1424.1 142.4 1129 69-1235 89-1453(1490)
9 KOG0058 Peptide exporter, ABC 100.0 7E-114 2E-118 1009.9 68.0 574 45-625 133-706 (716)
10 KOG0058 Peptide exporter, ABC 100.0 1E-108 3E-113 965.3 63.1 558 673-1235 133-705 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 9E-105 2E-109 982.6 70.5 579 43-624 648-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 5.4E-97 1E-101 908.4 72.0 570 44-623 139-708 (709)
13 PRK11174 cysteine/glutathione 100.0 4.2E-91 9E-96 872.4 74.5 568 45-624 8-585 (588)
14 COG1132 MdlB ABC-type multidru 100.0 8.8E-90 1.9E-94 855.4 75.0 562 47-624 4-565 (567)
15 COG2274 SunT ABC-type bacterio 100.0 3.4E-90 7.3E-95 848.3 68.3 554 674-1235 141-709 (709)
16 PTZ00265 multidrug resistance 100.0 7E-90 1.5E-94 915.9 75.7 570 46-623 812-1465(1466)
17 TIGR00958 3a01208 Conjugate Tr 100.0 8.8E-89 1.9E-93 862.7 75.1 565 44-619 146-710 (711)
18 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.5E-87 3.3E-92 852.7 76.9 564 45-623 121-685 (686)
19 PRK11160 cysteine/glutathione 100.0 2.5E-87 5.5E-92 831.4 74.7 567 47-621 4-572 (574)
20 TIGR01193 bacteriocin_ABC ABC- 100.0 2.2E-87 4.8E-92 854.1 75.5 565 45-621 142-707 (708)
21 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1E-86 2.2E-91 849.1 74.8 565 45-620 140-709 (710)
22 TIGR03375 type_I_sec_LssB type 100.0 2.9E-86 6.4E-91 842.0 73.9 557 45-611 133-689 (694)
23 PRK11176 lipid transporter ATP 100.0 4.5E-85 9.8E-90 817.6 75.8 566 47-623 13-579 (582)
24 COG4988 CydD ABC-type transpor 100.0 6E-85 1.3E-89 754.1 69.0 552 65-625 5-557 (559)
25 KOG0056 Heavy metal exporter H 100.0 8.2E-89 1.8E-93 749.1 35.0 552 65-627 220-778 (790)
26 TIGR01846 type_I_sec_HlyB type 100.0 1E-84 2.2E-89 827.2 75.9 568 45-623 125-692 (694)
27 PRK10790 putative multidrug tr 100.0 9.4E-84 2E-88 806.1 76.9 566 47-625 11-577 (592)
28 TIGR01192 chvA glucan exporter 100.0 3E-83 6.5E-88 795.9 76.3 564 47-623 7-570 (585)
29 TIGR02203 MsbA_lipidA lipid A 100.0 2.1E-83 4.6E-88 801.8 75.2 566 47-623 2-568 (571)
30 COG1132 MdlB ABC-type multidru 100.0 7.9E-84 1.7E-88 802.1 69.4 538 685-1235 13-565 (567)
31 TIGR02868 CydC thiol reductant 100.0 9.9E-84 2.2E-88 795.8 69.4 526 48-582 2-529 (529)
32 PRK13657 cyclic beta-1,2-gluca 100.0 7.5E-83 1.6E-87 796.6 76.1 566 46-624 6-571 (588)
33 KOG0057 Mitochondrial Fe/S clu 100.0 1.2E-83 2.6E-88 728.8 59.2 569 47-624 13-587 (591)
34 PRK10789 putative multidrug tr 100.0 1.1E-82 2.3E-87 790.0 72.1 544 73-625 8-552 (569)
35 PRK11174 cysteine/glutathione 100.0 5.9E-83 1.3E-87 798.8 69.5 552 675-1235 10-585 (588)
36 TIGR00958 3a01208 Conjugate Tr 100.0 1.2E-82 2.6E-87 806.6 69.9 550 673-1231 147-711 (711)
37 TIGR02204 MsbA_rel ABC transpo 100.0 7E-82 1.5E-86 788.4 75.7 571 46-623 5-575 (576)
38 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.1E-81 1.1E-85 793.0 71.4 548 675-1234 123-685 (686)
39 TIGR02857 CydD thiol reductant 100.0 1.4E-80 3.1E-85 767.7 71.2 524 62-594 5-529 (529)
40 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-80 2.8E-85 792.0 70.5 550 674-1233 143-708 (708)
41 COG4987 CydC ABC-type transpor 100.0 3E-80 6.6E-85 701.0 64.5 555 59-621 15-571 (573)
42 PRK11160 cysteine/glutathione 100.0 5.6E-80 1.2E-84 765.8 70.6 550 676-1233 5-573 (574)
43 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.3E-80 7.2E-85 789.2 69.8 549 674-1231 141-709 (710)
44 TIGR00957 MRP_assoc_pro multi 100.0 7.5E-80 1.6E-84 829.9 73.4 567 45-622 950-1519(1522)
45 COG4988 CydD ABC-type transpor 100.0 1.6E-79 3.6E-84 708.9 65.5 536 692-1235 5-556 (559)
46 TIGR01842 type_I_sec_PrtD type 100.0 4.7E-79 1E-83 754.9 72.8 533 62-610 8-542 (544)
47 KOG0056 Heavy metal exporter H 100.0 3.1E-82 6.8E-87 697.1 34.3 487 742-1234 272-774 (790)
48 TIGR03375 type_I_sec_LssB type 100.0 6.5E-79 1.4E-83 774.7 69.6 540 675-1222 135-689 (694)
49 PRK11176 lipid transporter ATP 100.0 7.8E-79 1.7E-83 761.3 69.1 550 677-1235 15-580 (582)
50 KOG0057 Mitochondrial Fe/S clu 100.0 2E-79 4.3E-84 694.4 57.3 527 700-1235 43-587 (591)
51 PRK10790 putative multidrug tr 100.0 1.3E-78 2.8E-83 759.7 69.9 549 676-1234 12-575 (592)
52 PLN03130 ABC transporter C fam 100.0 1.7E-78 3.8E-83 814.3 74.7 565 43-624 897-1475(1622)
53 TIGR01846 type_I_sec_HlyB type 100.0 4E-78 8.6E-83 766.8 70.9 552 675-1235 127-693 (694)
54 COG5265 ATM1 ABC-type transpor 100.0 2.9E-80 6.4E-85 678.6 40.6 492 125-621 3-496 (497)
55 PTZ00243 ABC transporter; Prov 100.0 3.2E-77 6.9E-82 801.4 75.3 510 112-624 1006-1547(1560)
56 PLN03232 ABC transporter C fam 100.0 3.5E-77 7.6E-82 803.0 72.5 511 106-624 952-1472(1495)
57 TIGR02203 MsbA_lipidA lipid A 100.0 8.3E-77 1.8E-81 742.4 69.4 548 678-1234 5-568 (571)
58 COG4987 CydC ABC-type transpor 100.0 6.6E-77 1.4E-81 673.9 61.3 490 737-1233 66-572 (573)
59 PRK13657 cyclic beta-1,2-gluca 100.0 6.5E-76 1.4E-80 734.2 71.1 549 675-1234 7-570 (588)
60 TIGR01194 cyc_pep_trnsptr cycl 100.0 5.4E-76 1.2E-80 727.3 69.3 536 44-602 2-551 (555)
61 TIGR01192 chvA glucan exporter 100.0 1E-75 2.2E-80 728.4 71.7 549 675-1234 7-570 (585)
62 COG1123 ATPase components of v 100.0 4.1E-78 8.9E-83 701.8 46.4 475 384-1231 5-529 (539)
63 TIGR02868 CydC thiol reductant 100.0 4.2E-76 9.1E-81 727.9 65.9 507 678-1193 4-529 (529)
64 PRK10789 putative multidrug tr 100.0 8.1E-76 1.8E-80 728.5 67.7 524 703-1234 11-550 (569)
65 TIGR02204 MsbA_rel ABC transpo 100.0 1.6E-75 3.6E-80 731.0 69.6 553 677-1234 8-575 (576)
66 COG5265 ATM1 ABC-type transpor 100.0 1E-77 2.3E-82 658.5 39.0 477 751-1232 4-496 (497)
67 TIGR02857 CydD thiol reductant 100.0 1.3E-73 2.8E-78 705.7 67.3 512 687-1205 3-529 (529)
68 PRK10261 glutathione transport 100.0 1.9E-74 4E-79 719.7 50.2 491 384-1229 12-561 (623)
69 TIGR01842 type_I_sec_PrtD type 100.0 3.9E-72 8.5E-77 693.2 69.1 523 685-1222 4-543 (544)
70 TIGR01271 CFTR_protein cystic 100.0 6.4E-72 1.4E-76 750.5 74.2 504 112-625 933-1454(1490)
71 PRK13549 xylose transporter AT 100.0 2.3E-73 5E-78 697.5 47.5 452 384-1220 5-493 (506)
72 PRK15134 microcin C ABC transp 100.0 3.5E-73 7.6E-78 699.6 49.0 459 384-1224 5-518 (529)
73 KOG0054 Multidrug resistance-a 100.0 7E-72 1.5E-76 708.2 60.2 511 106-620 860-1372(1381)
74 COG4618 ArpD ABC-type protease 100.0 1.2E-71 2.6E-76 624.3 52.3 533 64-611 27-561 (580)
75 PRK09700 D-allose transporter 100.0 3.7E-72 8.1E-77 688.0 48.7 449 384-1218 5-495 (510)
76 PRK10762 D-ribose transporter 100.0 5.2E-72 1.1E-76 684.7 47.2 444 384-1220 4-483 (501)
77 TIGR03269 met_CoM_red_A2 methy 100.0 3.2E-72 7E-77 690.2 45.6 443 385-1222 1-518 (520)
78 PRK10522 multidrug transporter 100.0 1.3E-69 2.8E-74 670.5 69.0 526 50-607 4-536 (547)
79 COG4172 ABC-type uncharacteriz 100.0 8.1E-72 1.7E-76 606.7 41.7 466 384-1229 6-524 (534)
80 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.4E-69 3E-74 670.1 65.0 522 674-1213 4-551 (555)
81 PRK15439 autoinducer 2 ABC tra 100.0 2.5E-71 5.5E-76 678.8 48.7 453 384-1221 11-492 (510)
82 PRK11288 araG L-arabinose tran 100.0 2.3E-71 5E-76 678.9 47.0 446 384-1220 4-484 (501)
83 TIGR02633 xylG D-xylose ABC tr 100.0 4.9E-71 1.1E-75 677.1 47.5 450 385-1219 2-490 (500)
84 TIGR01257 rim_protein retinal- 100.0 8.3E-69 1.8E-73 708.1 70.2 220 383-611 927-1150(2272)
85 PRK10982 galactose/methyl gala 100.0 7.6E-71 1.6E-75 673.3 44.8 443 387-1219 1-478 (491)
86 COG4618 ArpD ABC-type protease 100.0 6.7E-69 1.4E-73 602.2 49.9 511 699-1222 35-561 (580)
87 PRK10938 putative molybdenum t 100.0 8.5E-70 1.8E-74 664.5 44.5 445 385-1214 4-485 (490)
88 TIGR00954 3a01203 Peroxysomal 100.0 1.4E-67 2.9E-72 660.4 63.6 531 46-596 78-653 (659)
89 TIGR00956 3a01205 Pleiotropic 100.0 1.1E-68 2.3E-73 713.2 54.9 204 1010-1217 759-989 (1394)
90 PRK15064 ABC transporter ATP-b 100.0 6.7E-69 1.5E-73 661.7 49.0 475 385-1222 2-526 (530)
91 PRK10522 multidrug transporter 100.0 2.6E-65 5.7E-70 632.2 65.1 522 681-1222 7-540 (547)
92 PRK11819 putative ABC transpor 100.0 6.6E-67 1.4E-71 645.8 48.9 475 384-1222 6-534 (556)
93 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.2E-66 1.1E-70 637.9 54.8 475 384-1222 4-532 (552)
94 PRK10636 putative ABC transpor 100.0 7.8E-65 1.7E-69 633.3 53.0 194 1010-1221 312-517 (638)
95 PLN03140 ABC transporter G fam 100.0 1.7E-63 3.7E-68 659.5 61.0 205 1010-1217 867-1106(1470)
96 PRK11147 ABC transporter ATPas 100.0 2.7E-63 5.8E-68 621.5 51.6 194 1010-1221 319-528 (635)
97 PLN03073 ABC transporter F fam 100.0 6.5E-63 1.4E-67 616.1 46.9 193 1010-1220 508-713 (718)
98 COG1129 MglA ABC-type sugar tr 100.0 4.8E-62 1E-66 564.2 43.7 441 384-1217 8-486 (500)
99 PRK13409 putative ATPase RIL; 100.0 1.2E-62 2.7E-67 604.0 36.8 431 388-1215 77-536 (590)
100 TIGR00954 3a01203 Peroxysomal 100.0 4.2E-59 9.2E-64 583.8 61.6 513 675-1207 79-653 (659)
101 COG0488 Uup ATPase components 100.0 2.8E-60 6E-65 566.4 47.9 478 384-1222 3-526 (530)
102 COG3845 ABC-type uncharacteriz 100.0 3E-59 6.4E-64 527.5 41.0 451 384-1218 4-489 (501)
103 COG1126 GlnQ ABC-type polar am 100.0 3.4E-52 7.3E-57 423.4 22.1 216 384-613 2-228 (240)
104 cd03289 ABCC_CFTR2 The CFTR su 100.0 7.1E-51 1.5E-55 455.3 25.2 223 1009-1234 1-237 (275)
105 COG1135 AbcC ABC-type metal io 100.0 2.8E-50 6E-55 429.9 20.9 218 385-613 2-234 (339)
106 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.5E-49 7.6E-54 441.6 27.8 237 383-623 1-237 (275)
107 COG1125 OpuBA ABC-type proline 100.0 8.2E-50 1.8E-54 412.9 18.9 218 385-616 2-231 (309)
108 COG1117 PstB ABC-type phosphat 100.0 2.8E-49 6.2E-54 399.4 19.0 221 383-613 6-240 (253)
109 COG1126 GlnQ ABC-type polar am 100.0 8.8E-49 1.9E-53 398.5 22.4 211 1010-1225 2-229 (240)
110 COG4615 PvdE ABC-type sideroph 100.0 1.8E-45 4E-50 399.3 48.0 473 108-602 52-529 (546)
111 KOG0927 Predicted transporter 100.0 2.7E-47 5.8E-52 430.7 28.9 193 1010-1217 389-592 (614)
112 COG1135 AbcC ABC-type metal io 100.0 7.2E-48 1.6E-52 411.4 20.7 211 1011-1223 2-233 (339)
113 PRK14257 phosphate ABC transpo 100.0 1.3E-46 2.8E-51 431.8 26.6 224 381-612 77-315 (329)
114 PRK14257 phosphate ABC transpo 100.0 1.7E-46 3.6E-51 430.8 26.1 218 1006-1224 76-316 (329)
115 cd03252 ABCC_Hemolysin The ABC 100.0 5.3E-46 1.1E-50 411.7 27.4 235 385-621 1-235 (237)
116 COG2884 FtsE Predicted ATPase 100.0 1.9E-46 4.1E-51 372.3 18.9 207 385-604 2-220 (223)
117 COG1127 Ttg2A ABC-type transpo 100.0 4.2E-46 9.2E-51 384.9 21.5 223 383-619 7-244 (263)
118 COG1125 OpuBA ABC-type proline 100.0 3.3E-46 7.1E-51 386.2 19.9 213 1011-1228 2-232 (309)
119 COG1120 FepC ABC-type cobalami 100.0 6E-46 1.3E-50 399.9 22.1 214 384-611 2-229 (258)
120 COG3839 MalK ABC-type sugar tr 100.0 7.9E-46 1.7E-50 414.0 23.1 216 384-615 3-228 (338)
121 KOG0065 Pleiotropic drug resis 100.0 1.4E-44 3E-49 447.0 35.2 203 1013-1218 790-1018(1391)
122 COG1116 TauB ABC-type nitrate/ 100.0 1.3E-45 2.9E-50 388.4 22.1 198 384-600 3-212 (248)
123 cd03288 ABCC_SUR2 The SUR doma 100.0 6.3E-45 1.4E-49 407.1 28.5 240 380-621 15-254 (257)
124 COG1117 PstB ABC-type phosphat 100.0 8.6E-46 1.9E-50 374.2 19.0 207 1010-1223 7-239 (253)
125 COG3840 ThiQ ABC-type thiamine 100.0 1.3E-45 2.9E-50 362.6 19.7 209 385-611 2-220 (231)
126 COG1136 SalX ABC-type antimicr 100.0 4.2E-45 9.1E-50 385.7 24.9 206 385-600 2-221 (226)
127 COG3842 PotA ABC-type spermidi 100.0 6.1E-46 1.3E-50 417.1 19.2 216 383-614 4-230 (352)
128 COG1124 DppF ABC-type dipeptid 100.0 2.7E-45 5.8E-50 381.6 21.9 226 384-620 3-241 (252)
129 COG3638 ABC-type phosphate/pho 100.0 2.3E-45 4.9E-50 378.5 20.4 213 384-609 3-236 (258)
130 cd03253 ABCC_ATM1_transporter 100.0 1.1E-44 2.4E-49 400.9 27.2 233 385-620 1-233 (236)
131 cd03254 ABCC_Glucan_exporter_l 100.0 1.2E-44 2.5E-49 398.9 27.0 227 383-611 1-227 (229)
132 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-44 2.3E-49 400.6 26.5 231 385-617 1-231 (234)
133 TIGR02314 ABC_MetN D-methionin 100.0 4.7E-45 1E-49 419.1 24.5 221 385-616 2-236 (343)
134 COG4178 ABC-type uncharacteriz 100.0 3.2E-41 7E-46 398.1 57.0 468 107-595 89-587 (604)
135 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.4E-44 3.1E-49 400.5 26.9 227 385-611 1-227 (238)
136 cd03288 ABCC_SUR2 The SUR doma 100.0 1.1E-44 2.4E-49 405.2 25.5 228 1006-1234 15-256 (257)
137 COG1122 CbiO ABC-type cobalt t 100.0 7.9E-45 1.7E-49 392.5 21.9 215 384-611 3-229 (235)
138 cd03244 ABCC_MRP_domain2 Domai 100.0 3.8E-44 8.3E-49 392.6 27.5 220 383-604 1-220 (221)
139 cd03252 ABCC_Hemolysin The ABC 100.0 2E-44 4.2E-49 399.1 25.4 221 1011-1233 1-236 (237)
140 KOG0062 ATPase component of AB 100.0 2.5E-44 5.5E-49 404.6 26.2 182 1010-1212 362-559 (582)
141 cd03245 ABCC_bacteriocin_expor 100.0 1.1E-43 2.4E-48 388.6 27.8 220 383-603 1-220 (220)
142 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.3E-44 1.2E-48 382.4 23.6 210 384-611 4-228 (254)
143 PRK13631 cbiO cobalt transport 100.0 1.9E-43 4.1E-48 404.5 28.1 222 383-611 20-266 (320)
144 cd03261 ABC_Org_Solvent_Resist 100.0 1.5E-43 3.3E-48 391.3 23.7 213 385-611 1-227 (235)
145 TIGR02314 ABC_MetN D-methionin 100.0 2E-43 4.3E-48 405.7 25.5 212 1011-1224 2-233 (343)
146 COG1118 CysA ABC-type sulfate/ 100.0 5.4E-44 1.2E-48 380.5 19.0 215 384-614 2-231 (345)
147 cd03248 ABCC_TAP TAP, the Tran 100.0 2.9E-43 6.4E-48 386.8 25.5 220 380-599 7-226 (226)
148 PRK11650 ugpC glycerol-3-phosp 100.0 3.4E-43 7.3E-48 407.4 26.1 218 384-616 3-230 (356)
149 PRK13631 cbiO cobalt transport 100.0 5E-43 1.1E-47 401.0 26.6 210 1010-1221 21-265 (320)
150 cd03260 ABC_PstB_phosphate_tra 100.0 4.7E-43 1E-47 385.4 23.8 212 385-608 1-227 (227)
151 PRK11432 fbpC ferric transport 100.0 4.9E-43 1.1E-47 404.8 24.8 215 384-614 6-230 (351)
152 COG1127 Ttg2A ABC-type transpo 100.0 3.2E-43 6.9E-48 363.6 20.7 220 1010-1232 8-246 (263)
153 cd03251 ABCC_MsbA MsbA is an e 100.0 5.7E-43 1.2E-47 386.8 24.2 218 1011-1230 1-233 (234)
154 PRK13650 cbiO cobalt transport 100.0 6.5E-43 1.4E-47 394.9 24.6 217 384-611 4-230 (279)
155 cd03244 ABCC_MRP_domain2 Domai 100.0 7.4E-43 1.6E-47 382.4 23.9 207 1009-1216 1-221 (221)
156 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1E-42 2.2E-47 385.6 24.9 221 1011-1232 1-236 (238)
157 cd03253 ABCC_ATM1_transporter 100.0 1.2E-42 2.6E-47 384.7 25.1 220 1011-1233 1-235 (236)
158 COG4615 PvdE ABC-type sideroph 100.0 2.1E-40 4.6E-45 360.0 41.5 473 731-1214 50-530 (546)
159 TIGR01186 proV glycine betaine 100.0 5.4E-43 1.2E-47 404.0 22.8 207 400-617 6-226 (363)
160 TIGR03265 PhnT2 putative 2-ami 100.0 7.4E-43 1.6E-47 404.1 24.0 217 384-616 4-230 (353)
161 cd03254 ABCC_Glucan_exporter_l 100.0 1.7E-42 3.6E-47 381.8 25.5 212 1009-1222 1-227 (229)
162 PRK11153 metN DL-methionine tr 100.0 1.1E-42 2.5E-47 402.8 25.4 222 385-613 2-233 (343)
163 PRK14269 phosphate ABC transpo 100.0 1.2E-42 2.6E-47 386.6 24.4 218 384-611 2-231 (246)
164 COG1124 DppF ABC-type dipeptid 100.0 8.8E-43 1.9E-47 362.8 21.4 218 1010-1230 3-240 (252)
165 PRK14250 phosphate ABC transpo 100.0 2.9E-42 6.3E-47 382.1 26.2 223 384-619 3-230 (241)
166 COG1120 FepC ABC-type cobalami 100.0 7.6E-43 1.6E-47 375.9 20.8 210 1010-1222 2-229 (258)
167 PRK13647 cbiO cobalt transport 100.0 2.4E-42 5.2E-47 389.3 25.1 212 384-608 4-225 (274)
168 PRK09452 potA putrescine/sperm 100.0 2.3E-42 4.9E-47 401.6 25.5 217 384-616 14-240 (375)
169 cd03261 ABC_Org_Solvent_Resist 100.0 2.1E-42 4.6E-47 382.2 23.8 212 1011-1228 1-232 (235)
170 PRK13643 cbiO cobalt transport 100.0 2.6E-42 5.6E-47 391.5 25.1 217 385-611 2-234 (288)
171 COG3839 MalK ABC-type sugar tr 100.0 1.3E-42 2.7E-47 388.3 22.1 214 1010-1228 3-230 (338)
172 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-42 3.3E-47 383.9 22.4 222 385-611 1-233 (236)
173 PRK13637 cbiO cobalt transport 100.0 4.3E-42 9.3E-47 389.6 26.5 218 385-611 3-235 (287)
174 PRK10851 sulfate/thiosulfate t 100.0 2.4E-42 5.1E-47 399.9 24.6 217 384-616 2-232 (353)
175 COG3638 ABC-type phosphate/pho 100.0 1.5E-42 3.2E-47 357.7 20.2 208 1010-1221 3-237 (258)
176 COG1136 SalX ABC-type antimicr 100.0 4.2E-42 9.1E-47 363.0 23.9 202 1011-1212 2-222 (226)
177 PRK14273 phosphate ABC transpo 100.0 4.4E-42 9.6E-47 384.1 25.3 223 384-616 7-244 (254)
178 TIGR03258 PhnT 2-aminoethylpho 100.0 2.4E-42 5.2E-47 400.1 23.8 216 382-613 3-231 (362)
179 TIGR00972 3a0107s01c2 phosphat 100.0 4.4E-42 9.6E-47 382.5 25.0 218 385-612 2-234 (247)
180 TIGR00960 3a0501s02 Type II (G 100.0 1.8E-42 4E-47 377.8 21.4 203 385-599 2-216 (216)
181 cd03296 ABC_CysA_sulfate_impor 100.0 3.2E-42 7E-47 381.6 23.6 211 385-611 3-227 (239)
182 PRK13646 cbiO cobalt transport 100.0 5.5E-42 1.2E-46 388.8 25.5 220 385-611 3-236 (286)
183 PRK09536 btuD corrinoid ABC tr 100.0 3.9E-42 8.5E-47 401.5 24.8 214 384-611 3-229 (402)
184 PRK14242 phosphate transporter 100.0 4.6E-42 1E-46 383.9 24.3 218 384-611 6-238 (253)
185 PRK10744 pstB phosphate transp 100.0 8E-42 1.7E-46 383.0 25.8 222 382-613 11-247 (260)
186 PRK13634 cbiO cobalt transport 100.0 4.2E-42 9.2E-47 390.2 23.8 217 385-611 3-236 (290)
187 cd03256 ABC_PhnC_transporter A 100.0 5E-42 1.1E-46 381.1 23.6 212 385-609 1-233 (241)
188 PRK14250 phosphate ABC transpo 100.0 8.6E-42 1.9E-46 378.3 25.3 216 1010-1230 3-230 (241)
189 cd03259 ABC_Carb_Solutes_like 100.0 3.3E-42 7.1E-47 374.9 21.2 203 385-603 1-213 (213)
190 PRK15079 oligopeptide ABC tran 100.0 6.8E-42 1.5E-46 393.1 24.9 226 384-619 8-260 (331)
191 COG1122 CbiO ABC-type cobalt t 100.0 4.3E-42 9.4E-47 371.2 21.8 211 1010-1222 3-229 (235)
192 PRK13651 cobalt transporter AT 100.0 7.2E-42 1.6E-46 389.3 24.7 216 385-611 3-255 (305)
193 cd03263 ABC_subfamily_A The AB 100.0 5.3E-42 1.1E-46 375.4 22.7 211 385-608 1-219 (220)
194 PRK11153 metN DL-methionine tr 100.0 9E-42 1.9E-46 395.3 25.8 215 1011-1227 2-236 (343)
195 PRK13635 cbiO cobalt transport 100.0 7.9E-42 1.7E-46 385.8 24.7 216 384-611 5-230 (279)
196 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.7E-41 3.6E-46 367.6 26.1 203 383-605 5-207 (207)
197 TIGR02315 ABC_phnC phosphonate 100.0 7.4E-42 1.6E-46 380.1 23.9 212 385-609 2-234 (243)
198 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.3E-41 7.2E-46 378.7 29.4 239 356-618 15-254 (282)
199 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.8E-42 8.2E-47 386.9 21.8 218 386-617 26-257 (269)
200 PRK11000 maltose/maltodextrin 100.0 7.1E-42 1.5E-46 399.2 24.7 214 384-613 3-226 (369)
201 PRK14235 phosphate transporter 100.0 9.3E-42 2E-46 383.5 24.7 220 382-611 17-252 (267)
202 cd03258 ABC_MetN_methionine_tr 100.0 9.2E-42 2E-46 376.8 24.0 216 385-611 2-231 (233)
203 cd03260 ABC_PstB_phosphate_tra 100.0 7.3E-42 1.6E-46 376.0 22.9 206 1011-1219 1-227 (227)
204 cd03224 ABC_TM1139_LivF_branch 100.0 6E-42 1.3E-46 375.6 22.1 216 385-609 1-220 (222)
205 cd03245 ABCC_bacteriocin_expor 100.0 1.2E-41 2.6E-46 372.6 24.3 205 1009-1214 1-220 (220)
206 PRK13642 cbiO cobalt transport 100.0 1.4E-41 2.9E-46 384.0 25.4 217 384-611 4-230 (277)
207 PRK13636 cbiO cobalt transport 100.0 1.3E-41 2.9E-46 385.1 24.9 215 384-611 5-232 (283)
208 PRK11629 lolD lipoprotein tran 100.0 1.3E-41 2.7E-46 375.4 24.0 210 384-604 5-228 (233)
209 cd03226 ABC_cobalt_CbiO_domain 100.0 6E-42 1.3E-46 370.4 21.0 199 386-600 1-205 (205)
210 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-41 2.3E-46 378.2 23.3 218 385-611 1-226 (242)
211 PRK14247 phosphate ABC transpo 100.0 1.5E-41 3.3E-46 379.0 24.7 219 384-612 3-236 (250)
212 PRK13650 cbiO cobalt transport 100.0 1.8E-41 3.9E-46 383.2 25.3 211 1010-1222 4-230 (279)
213 COG3840 ThiQ ABC-type thiamine 100.0 5.9E-42 1.3E-46 336.9 18.4 204 1011-1223 2-221 (231)
214 PRK14267 phosphate ABC transpo 100.0 1.2E-41 2.6E-46 380.5 23.3 218 384-611 4-238 (253)
215 cd03224 ABC_TM1139_LivF_branch 100.0 1.8E-41 3.8E-46 371.9 24.0 207 1011-1221 1-221 (222)
216 COG2884 FtsE Predicted ATPase 100.0 6.5E-42 1.4E-46 340.0 18.4 204 1011-1216 2-221 (223)
217 PRK10070 glycine betaine trans 100.0 1.1E-41 2.5E-46 397.4 23.7 206 401-617 42-261 (400)
218 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.2E-42 2E-46 372.9 21.5 208 385-599 1-218 (218)
219 PRK14269 phosphate ABC transpo 100.0 2.4E-41 5.2E-46 376.1 25.2 211 1010-1223 2-232 (246)
220 cd03264 ABC_drug_resistance_li 100.0 1.3E-41 2.9E-46 369.6 22.5 203 385-603 1-211 (211)
221 cd03266 ABC_NatA_sodium_export 100.0 1.9E-41 4.1E-46 370.5 23.8 207 385-603 2-218 (218)
222 cd03250 ABCC_MRP_domain1 Domai 100.0 2.6E-41 5.6E-46 365.2 24.5 200 385-598 1-204 (204)
223 PRK13646 cbiO cobalt transport 100.0 2.6E-41 5.6E-46 383.3 25.4 213 1010-1222 2-236 (286)
224 PRK11607 potG putrescine trans 100.0 1.6E-41 3.5E-46 395.3 24.4 217 383-615 18-244 (377)
225 cd03265 ABC_DrrA DrrA is the A 100.0 1.8E-41 4E-46 370.8 23.3 209 385-608 1-219 (220)
226 cd03219 ABC_Mj1267_LivG_branch 100.0 1.8E-41 3.9E-46 375.3 23.5 207 1011-1222 1-233 (236)
227 cd03248 ABCC_TAP TAP, the Tran 100.0 1.5E-41 3.2E-46 373.3 22.5 205 1006-1210 7-226 (226)
228 TIGR03005 ectoine_ehuA ectoine 100.0 2E-41 4.4E-46 378.3 24.0 219 385-613 1-239 (252)
229 PRK14274 phosphate ABC transpo 100.0 2.7E-41 5.8E-46 378.7 25.0 220 384-613 12-246 (259)
230 PRK13637 cbiO cobalt transport 100.0 3.3E-41 7.1E-46 382.3 25.9 212 1011-1222 3-235 (287)
231 COG4175 ProV ABC-type proline/ 100.0 6.5E-42 1.4E-46 364.1 18.7 224 384-618 4-262 (386)
232 cd03218 ABC_YhbG The ABC trans 100.0 1.4E-41 3.1E-46 375.2 22.3 216 385-610 1-222 (232)
233 PRK11831 putative ABC transpor 100.0 2.1E-41 4.5E-46 381.1 24.1 222 384-619 7-242 (269)
234 TIGR03265 PhnT2 putative 2-ami 100.0 2.1E-41 4.6E-46 391.9 24.7 211 1010-1227 4-230 (353)
235 PRK11308 dppF dipeptide transp 100.0 2.6E-41 5.7E-46 388.0 25.3 227 384-620 5-254 (327)
236 TIGR00972 3a0107s01c2 phosphat 100.0 3.6E-41 7.8E-46 375.1 25.6 214 1011-1227 2-238 (247)
237 PRK13644 cbiO cobalt transport 100.0 2.9E-41 6.2E-46 380.5 24.9 214 385-611 2-225 (274)
238 PRK11432 fbpC ferric transport 100.0 2.6E-41 5.6E-46 390.5 25.0 213 1010-1227 6-232 (351)
239 PRK14268 phosphate ABC transpo 100.0 2.6E-41 5.6E-46 378.4 24.2 223 384-616 12-248 (258)
240 PRK14240 phosphate transporter 100.0 3.9E-41 8.4E-46 375.8 25.4 220 383-612 2-236 (250)
241 cd03268 ABC_BcrA_bacitracin_re 100.0 2.1E-41 4.6E-46 367.2 22.7 203 385-603 1-208 (208)
242 PRK13633 cobalt transporter AT 100.0 2.5E-41 5.4E-46 382.5 24.0 217 384-611 4-234 (280)
243 PRK11650 ugpC glycerol-3-phosp 100.0 3.1E-41 6.7E-46 391.0 25.3 213 1010-1228 3-231 (356)
244 PRK14259 phosphate ABC transpo 100.0 4.2E-41 9E-46 378.4 25.6 220 383-612 12-255 (269)
245 cd03263 ABC_subfamily_A The AB 100.0 2.8E-41 6.1E-46 369.6 23.6 205 1011-1219 1-219 (220)
246 PRK13652 cbiO cobalt transport 100.0 3.3E-41 7.1E-46 380.9 24.8 214 385-611 4-228 (277)
247 COG1116 TauB ABC-type nitrate/ 100.0 1.9E-41 4.2E-46 356.9 21.3 191 1010-1210 3-211 (248)
248 PRK10575 iron-hydroxamate tran 100.0 2.7E-41 5.8E-46 379.6 23.8 213 384-610 11-237 (265)
249 TIGR03415 ABC_choXWV_ATP choli 100.0 1.6E-41 3.6E-46 393.1 22.6 208 400-618 37-262 (382)
250 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.1E-41 4.5E-46 374.4 22.3 216 385-611 2-222 (236)
251 PRK13632 cbiO cobalt transport 100.0 3.8E-41 8.3E-46 379.4 24.8 216 384-611 7-232 (271)
252 TIGR02769 nickel_nikE nickel i 100.0 2.4E-41 5.2E-46 380.0 22.9 220 385-611 3-241 (265)
253 cd03258 ABC_MetN_methionine_tr 100.0 4E-41 8.7E-46 371.6 24.3 210 1011-1222 2-231 (233)
254 PRK14248 phosphate ABC transpo 100.0 4.1E-41 8.9E-46 379.0 24.9 219 384-612 21-254 (268)
255 cd03369 ABCC_NFT1 Domain 2 of 100.0 4E-41 8.7E-46 364.6 23.8 204 1008-1216 4-207 (207)
256 TIGR02211 LolD_lipo_ex lipopro 100.0 3.3E-41 7.2E-46 369.3 23.4 209 385-600 2-220 (221)
257 PRK13643 cbiO cobalt transport 100.0 4.9E-41 1.1E-45 381.1 25.5 212 1011-1222 2-234 (288)
258 PRK14251 phosphate ABC transpo 100.0 2.6E-41 5.6E-46 377.4 22.9 223 384-616 4-241 (251)
259 cd03247 ABCC_cytochrome_bd The 100.0 2.8E-41 6.2E-46 356.4 21.9 178 1011-1214 1-178 (178)
260 cd03293 ABC_NrtD_SsuB_transpor 100.0 2E-41 4.3E-46 370.6 21.4 206 385-606 1-219 (220)
261 PRK14236 phosphate transporter 100.0 4.7E-41 1E-45 378.9 25.1 220 382-611 23-257 (272)
262 PRK13537 nodulation ABC transp 100.0 1.9E-41 4.1E-46 386.8 22.1 213 384-611 7-228 (306)
263 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.1E-41 8.8E-46 373.5 24.2 208 1011-1222 1-226 (242)
264 PRK14237 phosphate transporter 100.0 4.8E-41 1E-45 377.8 25.0 220 382-611 18-252 (267)
265 PRK11022 dppD dipeptide transp 100.0 3.9E-41 8.4E-46 386.9 24.8 228 385-620 4-253 (326)
266 PRK13640 cbiO cobalt transport 100.0 5.4E-41 1.2E-45 379.9 25.4 216 384-611 5-233 (282)
267 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.5E-41 9.8E-46 371.7 24.3 206 1011-1222 2-222 (236)
268 PRK14239 phosphate transporter 100.0 4E-41 8.6E-46 376.3 24.0 219 384-612 5-238 (252)
269 TIGR01186 proV glycine betaine 100.0 3E-41 6.5E-46 389.5 23.6 200 1026-1227 6-225 (363)
270 PRK14273 phosphate ABC transpo 100.0 7.4E-41 1.6E-45 374.2 26.0 216 1010-1228 7-245 (254)
271 PRK11247 ssuB aliphatic sulfon 100.0 5.8E-41 1.3E-45 373.1 24.9 205 384-607 12-220 (257)
272 PRK14245 phosphate ABC transpo 100.0 3.2E-41 7E-46 376.2 22.9 219 384-612 3-236 (250)
273 cd03256 ABC_PhnC_transporter A 100.0 4.6E-41 1E-45 373.4 23.9 207 1011-1221 1-234 (241)
274 PRK09473 oppD oligopeptide tra 100.0 2.3E-41 4.9E-46 389.0 22.1 229 384-620 12-261 (330)
275 PRK09493 glnQ glutamine ABC tr 100.0 4.1E-41 8.9E-46 373.2 23.4 217 385-611 2-226 (240)
276 cd03301 ABC_MalK_N The N-termi 100.0 3.1E-41 6.8E-46 367.3 22.1 203 385-603 1-213 (213)
277 PRK11614 livF leucine/isoleuci 100.0 3.7E-41 7.9E-46 372.8 22.9 219 384-611 5-227 (237)
278 PRK11264 putative amino-acid A 100.0 8.6E-41 1.9E-45 373.1 26.0 217 385-611 4-234 (250)
279 PRK11231 fecE iron-dicitrate t 100.0 4.8E-41 1E-45 375.8 24.0 212 385-610 3-227 (255)
280 PRK13641 cbiO cobalt transport 100.0 5.8E-41 1.3E-45 380.6 24.9 221 384-611 2-235 (287)
281 TIGR02673 FtsE cell division A 100.0 3.3E-41 7.1E-46 367.5 21.9 201 385-598 2-214 (214)
282 PRK14243 phosphate transporter 100.0 7.2E-41 1.6E-45 375.7 25.2 220 384-613 10-251 (264)
283 PRK14256 phosphate ABC transpo 100.0 6.4E-41 1.4E-45 374.3 24.6 224 383-616 3-242 (252)
284 TIGR02315 ABC_phnC phosphonate 100.0 5.5E-41 1.2E-45 373.1 24.0 206 1011-1220 2-234 (243)
285 TIGR03411 urea_trans_UrtD urea 100.0 5.1E-41 1.1E-45 373.1 23.6 221 385-610 3-231 (242)
286 cd03296 ABC_CysA_sulfate_impor 100.0 5.4E-41 1.2E-45 371.8 23.7 205 1011-1222 3-227 (239)
287 cd03218 ABC_YhbG The ABC trans 100.0 5.5E-41 1.2E-45 370.4 23.7 206 1011-1221 1-222 (232)
288 PRK14244 phosphate ABC transpo 100.0 3.1E-41 6.7E-46 376.6 21.7 220 385-614 6-241 (251)
289 PRK13649 cbiO cobalt transport 100.0 9.8E-41 2.1E-45 378.4 26.1 220 385-611 3-235 (280)
290 PRK13645 cbiO cobalt transport 100.0 7.1E-41 1.5E-45 380.8 24.9 223 382-611 4-241 (289)
291 PRK13634 cbiO cobalt transport 100.0 8.4E-41 1.8E-45 379.6 25.3 210 1011-1222 3-236 (290)
292 PRK14238 phosphate transporter 100.0 8.6E-41 1.9E-45 376.3 25.0 220 384-613 24-258 (271)
293 cd03266 ABC_NatA_sodium_export 100.0 7.1E-41 1.5E-45 365.9 23.7 201 1011-1214 2-218 (218)
294 TIGR03410 urea_trans_UrtE urea 100.0 7E-41 1.5E-45 369.0 23.7 207 1011-1220 1-220 (230)
295 PRK14261 phosphate ABC transpo 100.0 7.3E-41 1.6E-45 374.1 24.1 225 384-618 6-245 (253)
296 PRK13648 cbiO cobalt transport 100.0 8.5E-41 1.8E-45 376.4 24.8 216 384-611 7-232 (269)
297 PRK14242 phosphate transporter 100.0 1.1E-40 2.5E-45 372.7 25.6 210 1010-1222 6-238 (253)
298 COG0410 LivF ABC-type branched 100.0 6.7E-41 1.4E-45 346.6 21.8 220 384-611 3-227 (237)
299 cd03259 ABC_Carb_Solutes_like 100.0 5E-41 1.1E-45 365.7 22.0 197 1011-1214 1-213 (213)
300 COG3842 PotA ABC-type spermidi 100.0 1.8E-41 3.8E-46 381.1 18.9 215 1010-1229 5-234 (352)
301 PRK13548 hmuV hemin importer A 100.0 1.2E-40 2.5E-45 372.7 25.4 213 385-611 3-231 (258)
302 PRK10619 histidine/lysine/argi 100.0 8.7E-41 1.9E-45 374.1 24.4 215 383-611 4-242 (257)
303 PRK13638 cbiO cobalt transport 100.0 7E-41 1.5E-45 377.5 23.8 213 385-611 2-226 (271)
304 TIGR03410 urea_trans_UrtE urea 100.0 3.7E-41 7.9E-46 371.2 21.0 212 385-609 1-220 (230)
305 cd03247 ABCC_cytochrome_bd The 100.0 6.4E-41 1.4E-45 353.7 21.8 178 385-603 1-178 (178)
306 PRK11124 artP arginine transpo 100.0 8.8E-41 1.9E-45 371.0 24.0 216 385-610 3-230 (242)
307 TIGR03258 PhnT 2-aminoethylpho 100.0 8.7E-41 1.9E-45 387.1 24.8 213 1008-1227 3-234 (362)
308 cd03225 ABC_cobalt_CbiO_domain 100.0 4.6E-41 1E-45 365.4 21.2 201 386-598 1-211 (211)
309 cd03292 ABC_FtsE_transporter F 100.0 6.2E-41 1.4E-45 365.4 22.2 202 385-599 1-214 (214)
310 PRK14262 phosphate ABC transpo 100.0 7.9E-41 1.7E-45 373.3 23.4 219 384-612 3-236 (250)
311 TIGR01288 nodI ATP-binding ABC 100.0 7.2E-41 1.6E-45 382.8 23.6 217 384-611 4-225 (303)
312 PRK14253 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 371.6 24.8 218 384-611 3-234 (249)
313 PRK13647 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 375.4 25.1 209 1010-1220 4-226 (274)
314 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7E-41 1.5E-45 376.6 23.0 213 1012-1229 26-258 (269)
315 COG4555 NatA ABC-type Na+ tran 100.0 1E-41 2.2E-46 341.2 14.3 213 385-611 2-223 (245)
316 PRK10895 lipopolysaccharide AB 100.0 7.5E-41 1.6E-45 371.3 23.0 217 385-611 4-227 (241)
317 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.6E-41 1.7E-45 358.2 22.0 204 1010-1222 4-228 (254)
318 cd03235 ABC_Metallic_Cations A 100.0 3.8E-41 8.3E-46 366.6 20.1 198 386-603 1-213 (213)
319 PRK10744 pstB phosphate transp 100.0 1.8E-40 3.8E-45 372.1 26.1 212 1008-1222 11-245 (260)
320 PRK15079 oligopeptide ABC tran 100.0 1.3E-40 2.7E-45 382.6 25.5 220 1010-1229 8-259 (331)
321 PRK14270 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 372.0 24.5 219 384-612 4-237 (251)
322 cd03290 ABCC_SUR1_N The SUR do 100.0 1.5E-40 3.1E-45 363.2 24.7 210 386-598 2-218 (218)
323 cd03257 ABC_NikE_OppD_transpor 100.0 8.2E-41 1.8E-45 368.2 22.8 212 385-603 2-228 (228)
324 PRK10584 putative ABC transpor 100.0 1.3E-40 2.8E-45 366.4 24.2 208 384-602 6-227 (228)
325 PRK15093 antimicrobial peptide 100.0 1.2E-40 2.7E-45 384.2 25.1 228 385-620 4-258 (330)
326 PRK13636 cbiO cobalt transport 100.0 1.4E-40 2.9E-45 376.8 24.8 211 1010-1222 5-232 (283)
327 PRK11629 lolD lipoprotein tran 100.0 1.4E-40 3.1E-45 367.0 24.4 204 1010-1215 5-228 (233)
328 PRK14249 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 371.5 24.4 218 384-611 4-236 (251)
329 PRK14271 phosphate ABC transpo 100.0 1.8E-40 3.9E-45 374.1 25.6 219 384-612 21-253 (276)
330 PRK10851 sulfate/thiosulfate t 100.0 1.4E-40 3E-45 385.2 25.2 211 1010-1227 2-232 (353)
331 PRK13642 cbiO cobalt transport 100.0 1.5E-40 3.2E-45 375.6 24.7 213 1010-1222 4-230 (277)
332 TIGR00960 3a0501s02 Type II (G 100.0 8.9E-41 1.9E-45 364.5 22.1 197 1011-1210 2-216 (216)
333 TIGR03005 ectoine_ehuA ectoine 100.0 1.7E-40 3.7E-45 370.9 24.8 209 1011-1224 1-239 (252)
334 PRK11308 dppF dipeptide transp 100.0 2.1E-40 4.6E-45 380.5 26.0 218 1010-1229 5-252 (327)
335 TIGR02769 nickel_nikE nickel i 100.0 1.7E-40 3.8E-45 373.0 24.8 218 1011-1230 3-249 (265)
336 PRK10247 putative ABC transpor 100.0 1.4E-40 3E-45 364.8 23.4 209 384-606 7-223 (225)
337 PRK13639 cbiO cobalt transport 100.0 1E-40 2.2E-45 376.5 23.0 214 385-611 2-227 (275)
338 PRK14268 phosphate ABC transpo 100.0 2.2E-40 4.8E-45 370.9 25.5 213 1010-1225 12-246 (258)
339 PRK13632 cbiO cobalt transport 100.0 1.9E-40 4.2E-45 373.7 25.1 210 1010-1222 7-232 (271)
340 PRK10253 iron-enterobactin tra 100.0 1.6E-40 3.6E-45 373.2 24.5 214 383-610 6-233 (265)
341 PRK11264 putative amino-acid A 100.0 1.8E-40 3.8E-45 370.6 24.6 207 1011-1222 4-234 (250)
342 PRK10908 cell division protein 100.0 1.7E-40 3.7E-45 363.7 23.9 204 385-601 2-217 (222)
343 PRK14267 phosphate ABC transpo 100.0 2.3E-40 5.1E-45 370.2 25.3 211 1010-1223 4-239 (253)
344 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.5E-41 1.6E-45 365.7 20.8 198 1011-1210 1-218 (218)
345 PRK14260 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 372.5 23.7 219 383-611 6-244 (259)
346 PRK13536 nodulation factor exp 100.0 9.4E-41 2E-45 384.6 22.5 217 384-611 41-262 (340)
347 PRK13635 cbiO cobalt transport 100.0 2.1E-40 4.6E-45 374.1 24.9 212 1010-1222 5-230 (279)
348 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-40 2.4E-45 380.6 22.9 216 385-611 3-222 (301)
349 PRK13651 cobalt transporter AT 100.0 1.9E-40 4.2E-45 377.6 24.8 211 1010-1222 2-255 (305)
350 PRK13537 nodulation ABC transp 100.0 1.8E-40 3.8E-45 378.8 24.5 207 1010-1222 7-228 (306)
351 PRK11831 putative ABC transpor 100.0 1.9E-40 4.1E-45 373.4 24.2 219 1010-1231 7-243 (269)
352 TIGR03873 F420-0_ABC_ATP propo 100.0 1.7E-40 3.7E-45 371.5 23.7 212 385-610 2-226 (256)
353 PRK14274 phosphate ABC transpo 100.0 2.8E-40 6.1E-45 370.5 25.4 215 1010-1227 12-249 (259)
354 PRK11022 dppD dipeptide transp 100.0 2.3E-40 5E-45 380.5 25.3 217 1011-1229 4-251 (326)
355 PRK10619 histidine/lysine/argi 100.0 2.6E-40 5.6E-45 370.3 25.1 209 1009-1222 4-242 (257)
356 PRK14235 phosphate transporter 100.0 2.7E-40 5.8E-45 371.7 25.1 212 1008-1222 17-252 (267)
357 PRK14275 phosphate ABC transpo 100.0 1.4E-40 3E-45 377.0 23.0 225 383-617 38-277 (286)
358 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.4E-40 5.1E-45 359.8 23.9 201 385-603 1-211 (211)
359 PRK11000 maltose/maltodextrin 100.0 1.9E-40 4.1E-45 387.2 24.8 211 1010-1227 3-229 (369)
360 cd03265 ABC_DrrA DrrA is the A 100.0 2.1E-40 4.6E-45 362.4 23.6 203 1011-1219 1-219 (220)
361 TIGR03411 urea_trans_UrtD urea 100.0 2.6E-40 5.6E-45 367.4 24.6 206 1011-1221 3-231 (242)
362 PRK11144 modC molybdate transp 100.0 1.8E-40 3.8E-45 385.9 24.2 212 385-613 2-221 (352)
363 PRK14266 phosphate ABC transpo 100.0 2.7E-40 6E-45 368.9 24.8 223 384-616 3-240 (250)
364 PRK11300 livG leucine/isoleuci 100.0 2.1E-40 4.6E-45 371.1 24.0 221 384-611 5-244 (255)
365 PRK09452 potA putrescine/sperm 100.0 2.5E-40 5.5E-45 384.5 25.4 213 1010-1227 14-240 (375)
366 PRK09473 oppD oligopeptide tra 100.0 2.6E-40 5.5E-45 380.3 25.0 219 1010-1229 12-259 (330)
367 cd03264 ABC_drug_resistance_li 100.0 1.8E-40 3.8E-45 360.8 22.2 197 1011-1214 1-211 (211)
368 cd03246 ABCC_Protease_Secretio 100.0 2E-40 4.3E-45 348.1 21.8 172 385-599 1-173 (173)
369 PRK14259 phosphate ABC transpo 100.0 3.8E-40 8.2E-45 370.6 25.6 212 1009-1223 12-255 (269)
370 cd03246 ABCC_Protease_Secretio 100.0 1.6E-40 3.6E-45 348.8 21.1 172 1011-1210 1-173 (173)
371 PRK09493 glnQ glutamine ABC tr 100.0 3E-40 6.5E-45 366.3 24.4 207 1011-1222 2-226 (240)
372 PRK11614 livF leucine/isoleuci 100.0 3.2E-40 6.9E-45 365.4 24.5 209 1010-1222 5-227 (237)
373 TIGR02211 LolD_lipo_ex lipopro 100.0 2.4E-40 5.1E-45 362.6 23.3 199 1011-1211 2-220 (221)
374 PRK14252 phosphate ABC transpo 100.0 2.8E-40 6.1E-45 371.6 24.5 220 382-611 14-250 (265)
375 cd03300 ABC_PotA_N PotA is an 100.0 1.5E-40 3.2E-45 366.5 21.7 211 385-611 1-221 (232)
376 COG1123 ATPase components of v 100.0 1.3E-40 2.9E-45 388.2 22.4 229 383-621 279-530 (539)
377 PRK11124 artP arginine transpo 100.0 2.9E-40 6.3E-45 366.9 24.1 208 1010-1222 2-231 (242)
378 PRK14240 phosphate transporter 100.0 4.3E-40 9.2E-45 367.4 25.4 212 1009-1223 2-236 (250)
379 cd03262 ABC_HisP_GlnQ_permease 100.0 1.5E-40 3.3E-45 362.1 21.2 205 385-599 1-213 (213)
380 PRK14272 phosphate ABC transpo 100.0 2.1E-40 4.6E-45 370.4 22.9 223 384-616 4-242 (252)
381 PRK13645 cbiO cobalt transport 100.0 4E-40 8.6E-45 374.7 25.5 215 1008-1222 4-241 (289)
382 PRK14254 phosphate ABC transpo 100.0 3.9E-40 8.5E-45 372.8 25.3 219 383-611 38-270 (285)
383 PRK11701 phnK phosphonate C-P 100.0 3E-40 6.4E-45 370.1 24.0 225 384-618 6-249 (258)
384 PRK14241 phosphate transporter 100.0 2.5E-40 5.4E-45 370.7 23.4 218 384-611 4-243 (258)
385 cd03269 ABC_putative_ATPase Th 100.0 1.7E-40 3.7E-45 360.6 21.4 205 385-603 1-210 (210)
386 PRK10895 lipopolysaccharide AB 100.0 2.9E-40 6.2E-45 366.7 23.6 207 1011-1222 4-227 (241)
387 PRK14238 phosphate transporter 100.0 4.9E-40 1.1E-44 370.1 25.8 211 1010-1223 24-257 (271)
388 PRK13649 cbiO cobalt transport 100.0 3.9E-40 8.5E-45 373.5 25.1 212 1011-1222 3-235 (280)
389 PRK14247 phosphate ABC transpo 100.0 3.7E-40 7.9E-45 367.9 24.4 214 1010-1228 3-241 (250)
390 PRK14239 phosphate transporter 100.0 4.9E-40 1.1E-44 367.5 25.4 211 1010-1223 5-238 (252)
391 PRK14263 phosphate ABC transpo 100.0 3.5E-40 7.7E-45 368.9 24.2 219 384-612 8-247 (261)
392 PRK15112 antimicrobial peptide 100.0 4E-40 8.7E-45 370.3 24.7 227 384-621 4-251 (267)
393 PRK13652 cbiO cobalt transport 100.0 4.9E-40 1.1E-44 371.4 25.5 208 1011-1222 4-228 (277)
394 TIGR00968 3a0106s01 sulfate AB 100.0 4.7E-40 1E-44 363.4 24.5 211 385-611 1-221 (237)
395 PRK14251 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 366.6 25.3 212 1010-1224 4-238 (251)
396 PRK13641 cbiO cobalt transport 100.0 6.1E-40 1.3E-44 372.2 25.9 211 1010-1222 2-235 (287)
397 PRK10771 thiQ thiamine transpo 100.0 5.3E-40 1.2E-44 362.2 24.7 209 385-611 2-220 (232)
398 COG1131 CcmA ABC-type multidru 100.0 2.9E-40 6.3E-45 373.1 22.9 214 384-611 4-227 (293)
399 PRK09536 btuD corrinoid ABC tr 100.0 4.3E-40 9.2E-45 384.4 25.1 210 1010-1222 3-229 (402)
400 PRK14265 phosphate ABC transpo 100.0 7.6E-40 1.7E-44 368.9 26.3 219 384-612 20-260 (274)
401 PRK14236 phosphate transporter 100.0 7.4E-40 1.6E-44 369.2 26.1 212 1008-1222 23-257 (272)
402 PRK14245 phosphate ABC transpo 100.0 6.1E-40 1.3E-44 366.0 25.1 212 1010-1224 3-237 (250)
403 PRK13644 cbiO cobalt transport 100.0 6.3E-40 1.4E-44 369.6 25.4 208 1011-1222 2-225 (274)
404 PRK14258 phosphate ABC transpo 100.0 4.5E-40 9.8E-45 368.8 24.1 220 383-612 6-247 (261)
405 cd03268 ABC_BcrA_bacitracin_re 100.0 2.8E-40 6E-45 358.4 21.3 197 1011-1214 1-208 (208)
406 TIGR01277 thiQ thiamine ABC tr 100.0 5.8E-40 1.3E-44 357.0 23.8 202 385-604 1-212 (213)
407 TIGR01288 nodI ATP-binding ABC 100.0 5.1E-40 1.1E-44 375.8 24.5 207 1010-1222 4-225 (303)
408 PRK09984 phosphonate/organopho 100.0 6.8E-40 1.5E-44 368.0 25.0 211 384-608 4-240 (262)
409 PRK14262 phosphate ABC transpo 100.0 7.7E-40 1.7E-44 365.3 25.2 218 1010-1230 3-243 (250)
410 PRK10070 glycine betaine trans 100.0 5.9E-40 1.3E-44 383.0 25.2 199 1027-1227 42-260 (400)
411 PRK13648 cbiO cobalt transport 100.0 7.5E-40 1.6E-44 368.7 25.1 212 1010-1222 7-232 (269)
412 TIGR01978 sufC FeS assembly AT 100.0 3.8E-40 8.3E-45 366.5 22.5 215 385-609 1-233 (243)
413 PRK11607 potG putrescine trans 100.0 5.7E-40 1.2E-44 382.4 24.8 211 1010-1227 19-245 (377)
414 COG4178 ABC-type uncharacteriz 100.0 1.1E-36 2.4E-41 359.7 52.9 458 731-1206 88-587 (604)
415 PRK14237 phosphate transporter 100.0 1E-39 2.2E-44 366.9 26.1 211 1009-1222 19-252 (267)
416 PRK13547 hmuV hemin importer A 100.0 6.3E-40 1.4E-44 367.9 24.3 216 385-610 2-244 (272)
417 cd03301 ABC_MalK_N The N-termi 100.0 4.3E-40 9.3E-45 358.4 22.3 197 1011-1214 1-213 (213)
418 PRK14246 phosphate ABC transpo 100.0 4.8E-40 1E-44 367.0 23.0 228 383-620 9-251 (257)
419 PRK14261 phosphate ABC transpo 100.0 9.2E-40 2E-44 365.2 25.2 218 1010-1230 6-246 (253)
420 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.4E-39 3.1E-44 365.5 26.8 207 1006-1231 35-256 (282)
421 TIGR03522 GldA_ABC_ATP gliding 100.0 6.9E-40 1.5E-44 374.1 24.6 206 1011-1222 3-222 (301)
422 PRK13640 cbiO cobalt transport 100.0 8.5E-40 1.9E-44 370.1 25.1 210 1010-1222 5-233 (282)
423 PRK11701 phnK phosphonate C-P 100.0 9.2E-40 2E-44 366.1 25.1 216 1010-1230 6-250 (258)
424 PRK14248 phosphate ABC transpo 100.0 1.3E-39 2.7E-44 366.9 26.3 210 1010-1222 21-253 (268)
425 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.1E-40 8.9E-45 360.2 21.8 199 1011-1216 1-218 (220)
426 PRK11300 livG leucine/isoleuci 100.0 7E-40 1.5E-44 366.9 24.1 208 1010-1222 5-244 (255)
427 PRK14271 phosphate ABC transpo 100.0 7.8E-40 1.7E-44 369.0 24.6 211 1010-1223 21-253 (276)
428 PRK14255 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 366.8 23.3 219 384-612 5-238 (252)
429 PRK10575 iron-hydroxamate tran 100.0 6.6E-40 1.4E-44 368.3 23.9 207 1010-1221 11-237 (265)
430 PRK13633 cobalt transporter AT 100.0 8.3E-40 1.8E-44 370.1 24.8 213 1010-1222 4-234 (280)
431 PRK10247 putative ABC transpor 100.0 4.1E-40 9E-45 361.0 21.5 203 1010-1217 7-223 (225)
432 PRK14256 phosphate ABC transpo 100.0 1E-39 2.2E-44 364.6 25.0 213 1009-1224 3-239 (252)
433 cd03225 ABC_cobalt_CbiO_domain 100.0 4.8E-40 1E-44 357.5 21.8 195 1012-1209 1-211 (211)
434 COG0411 LivG ABC-type branched 100.0 1.3E-40 2.8E-45 347.1 16.4 221 385-612 5-241 (250)
435 PRK14272 phosphate ABC transpo 100.0 1.2E-39 2.6E-44 364.4 25.5 215 1010-1227 4-242 (252)
436 PRK14249 phosphate ABC transpo 100.0 1.4E-39 3E-44 363.3 25.9 210 1010-1222 4-236 (251)
437 PRK13638 cbiO cobalt transport 100.0 1.1E-39 2.3E-44 367.8 25.2 207 1011-1222 2-226 (271)
438 cd03226 ABC_cobalt_CbiO_domain 100.0 4.5E-40 9.7E-45 355.8 21.1 193 1012-1211 1-205 (205)
439 cd03299 ABC_ModC_like Archeal 100.0 8.8E-40 1.9E-44 360.8 23.8 210 385-611 1-220 (235)
440 PRK14244 phosphate ABC transpo 100.0 8.5E-40 1.8E-44 365.0 23.8 214 1011-1227 6-243 (251)
441 TIGR01188 drrA daunorubicin re 100.0 3.3E-40 7.2E-45 377.2 20.9 200 400-611 6-214 (302)
442 TIGR03415 ABC_choXWV_ATP choli 100.0 7.2E-40 1.6E-44 379.4 23.9 201 1027-1229 38-262 (382)
443 cd03257 ABC_NikE_OppD_transpor 100.0 9.1E-40 2E-44 359.9 23.6 202 1011-1214 2-228 (228)
444 PRK11231 fecE iron-dicitrate t 100.0 9.1E-40 2E-44 365.5 23.9 216 1011-1231 3-235 (255)
445 cd03234 ABCG_White The White s 100.0 4.5E-40 9.8E-45 361.2 20.9 214 385-603 4-226 (226)
446 cd03269 ABC_putative_ATPase Th 100.0 6E-40 1.3E-44 356.3 21.5 195 1011-1214 1-210 (210)
447 TIGR00968 3a0106s01 sulfate AB 100.0 1.1E-39 2.5E-44 360.4 24.0 205 1011-1222 1-221 (237)
448 PRK11248 tauB taurine transpor 100.0 1.1E-39 2.4E-44 363.6 23.8 203 385-606 2-216 (255)
449 PRK14264 phosphate ABC transpo 100.0 1.5E-39 3.3E-44 371.7 25.5 219 383-611 44-290 (305)
450 PRK14243 phosphate transporter 100.0 1.5E-39 3.2E-44 365.0 24.9 211 1010-1223 10-250 (264)
451 cd03292 ABC_FtsE_transporter F 100.0 9.7E-40 2.1E-44 356.0 22.7 196 1011-1210 1-214 (214)
452 PRK14260 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 364.2 24.8 213 1009-1224 6-246 (259)
453 PRK15093 antimicrobial peptide 100.0 1.7E-39 3.8E-44 374.6 25.6 217 1011-1229 4-256 (330)
454 PRK13536 nodulation factor exp 100.0 1.4E-39 2.9E-44 375.0 24.6 207 1010-1222 41-262 (340)
455 PRK13548 hmuV hemin importer A 100.0 2E-39 4.3E-44 362.8 25.2 209 1011-1222 3-231 (258)
456 PRK14270 phosphate ABC transpo 100.0 2E-39 4.2E-44 362.1 25.0 210 1010-1222 4-236 (251)
457 TIGR02142 modC_ABC molybdenum 100.0 1.1E-39 2.5E-44 379.8 23.6 212 389-616 4-227 (354)
458 cd03300 ABC_PotA_N PotA is an 100.0 1.7E-39 3.8E-44 358.0 23.8 207 1011-1222 1-221 (232)
459 PRK14253 phosphate ABC transpo 100.0 2.2E-39 4.9E-44 361.3 24.8 210 1010-1222 3-234 (249)
460 COG0444 DppD ABC-type dipeptid 100.0 1.4E-39 3.1E-44 354.4 22.5 228 385-620 2-253 (316)
461 COG1137 YhbG ABC-type (unclass 100.0 6.9E-41 1.5E-45 334.8 11.0 224 383-612 3-230 (243)
462 PRK10419 nikE nickel transport 100.0 1.7E-39 3.6E-44 365.2 23.6 227 385-619 4-249 (268)
463 PRK14275 phosphate ABC transpo 100.0 2.7E-39 5.8E-44 366.5 25.4 215 1010-1227 39-276 (286)
464 PRK14254 phosphate ABC transpo 100.0 4E-39 8.8E-44 364.6 26.8 208 1010-1222 39-270 (285)
465 PRK14266 phosphate ABC transpo 100.0 3.1E-39 6.6E-44 360.5 25.5 215 1010-1227 3-240 (250)
466 TIGR02982 heterocyst_DevA ABC 100.0 1.8E-39 3.8E-44 355.1 23.0 204 385-599 2-219 (220)
467 PRK13639 cbiO cobalt transport 100.0 2.4E-39 5.2E-44 365.3 24.8 208 1011-1222 2-227 (275)
468 PRK11247 ssuB aliphatic sulfon 100.0 1.9E-39 4E-44 361.1 23.5 198 1010-1217 12-219 (257)
469 PRK14241 phosphate transporter 100.0 2.4E-39 5.3E-44 362.7 24.6 210 1010-1222 4-243 (258)
470 PRK15112 antimicrobial peptide 100.0 2.5E-39 5.4E-44 363.9 24.7 221 1010-1232 4-251 (267)
471 PRK10584 putative ABC transpor 100.0 2.7E-39 5.8E-44 355.9 24.3 202 1010-1213 6-227 (228)
472 cd03250 ABCC_MRP_domain1 Domai 100.0 1.2E-39 2.5E-44 352.3 20.9 186 1011-1209 1-204 (204)
473 cd03262 ABC_HisP_GlnQ_permease 100.0 1.6E-39 3.5E-44 353.9 21.7 195 1011-1210 1-213 (213)
474 TIGR01188 drrA daunorubicin re 100.0 1.9E-39 4.1E-44 371.0 23.1 194 1026-1222 6-214 (302)
475 TIGR03873 F420-0_ABC_ATP propo 100.0 2.7E-39 5.8E-44 361.9 23.8 206 1011-1221 2-226 (256)
476 TIGR02673 FtsE cell division A 100.0 2.1E-39 4.5E-44 353.3 22.3 195 1011-1209 2-214 (214)
477 PRK10253 iron-enterobactin tra 100.0 3.1E-39 6.8E-44 362.9 24.3 209 1010-1221 7-233 (265)
478 cd03235 ABC_Metallic_Cations A 100.0 1.2E-39 2.7E-44 354.7 20.4 192 1012-1214 1-213 (213)
479 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-39 2.3E-44 347.7 19.2 211 1010-1227 2-233 (345)
480 PRK00349 uvrA excinuclease ABC 100.0 1E-38 2.2E-43 403.1 31.4 103 1123-1225 818-931 (943)
481 PRK14258 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 360.3 25.6 214 1009-1225 6-249 (261)
482 PRK14246 phosphate ABC transpo 100.0 4.7E-39 1E-43 359.1 25.0 219 1010-1231 10-251 (257)
483 cd03233 ABC_PDR_domain1 The pl 100.0 2.6E-39 5.7E-44 348.1 22.0 191 384-603 3-202 (202)
484 TIGR02323 CP_lyasePhnK phospho 100.0 2.6E-39 5.6E-44 361.7 22.7 225 384-618 3-246 (253)
485 TIGR00630 uvra excinuclease AB 100.0 1.3E-38 2.8E-43 401.5 31.6 99 512-610 475-583 (924)
486 PRK10418 nikD nickel transport 100.0 4.2E-39 9.1E-44 359.7 24.1 215 384-612 4-232 (254)
487 COG4598 HisP ABC-type histidin 100.0 4.4E-40 9.4E-45 322.0 13.9 220 384-613 6-244 (256)
488 PRK10908 cell division protein 100.0 4.6E-39 1E-43 352.4 23.8 198 1011-1212 2-217 (222)
489 PRK14252 phosphate ABC transpo 100.0 6.9E-39 1.5E-43 360.3 25.7 212 1008-1222 14-250 (265)
490 cd03233 ABC_PDR_domain1 The pl 100.0 3.7E-39 8E-44 347.0 22.5 191 1010-1214 3-202 (202)
491 TIGR01978 sufC FeS assembly AT 100.0 4.4E-39 9.5E-44 358.0 23.8 208 1011-1221 1-234 (243)
492 PRK14263 phosphate ABC transpo 100.0 6.9E-39 1.5E-43 358.5 25.2 212 1010-1224 8-248 (261)
493 TIGR03740 galliderm_ABC gallid 100.0 4E-39 8.8E-44 353.1 22.8 205 385-607 1-210 (223)
494 PRK13547 hmuV hemin importer A 100.0 5.2E-39 1.1E-43 360.5 24.0 208 1011-1221 2-244 (272)
495 PRK14255 phosphate ABC transpo 100.0 7.5E-39 1.6E-43 357.8 25.2 212 1010-1224 5-239 (252)
496 PRK10419 nikE nickel transport 100.0 6.3E-39 1.4E-43 360.5 24.7 216 1011-1229 4-248 (268)
497 cd03228 ABCC_MRP_Like The MRP 100.0 4.6E-39 1E-43 337.1 21.8 171 385-598 1-171 (171)
498 COG4172 ABC-type uncharacteriz 100.0 4.3E-39 9.3E-44 351.4 22.2 227 382-619 274-525 (534)
499 PRK14264 phosphate ABC transpo 100.0 1E-38 2.2E-43 364.8 26.5 210 1010-1222 45-290 (305)
500 cd03297 ABC_ModC_molybdenum_tr 100.0 4.1E-39 8.9E-44 350.7 22.1 204 386-603 3-214 (214)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-219 Score=1999.63 Aligned_cols=1188 Identities=54% Similarity=0.887 Sum_probs=1103.1
Q ss_pred cchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 44 RIPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFF 123 (1236)
Q Consensus 44 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1236)
..++..+++|..++++.+++++++++++.++..|++.+++++++|.+....+. ...+.+..+++.+++++++.++..|+
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~-~~~~~~~~~~l~~~~lg~~~~~~~~~ 90 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNK-IASSEVSKVALYFVYLGVGVFISGFI 90 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999987654322 22245667888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 124 QVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFK 203 (1236)
Q Consensus 124 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1236)
+..||.+.++|+..++|.++++.++|++++|||.+ .+|++.+|+++|++.|++++++.+..++..+.++++++++.|+.
T Consensus 91 q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 91 QVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 040099 204 GWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQ 283 (1236)
Q Consensus 204 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 283 (1236)
.|+|+++++.+.|++++....+.+.+.+...+.++.+++..++++|++.++|||.+|+.|+.+.+||.+..+..++...+
T Consensus 170 ~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~ 249 (1228)
T KOG0055|consen 170 GWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIK 249 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 284 EGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAIN 363 (1236)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 363 (1236)
...+.++..+++.++.+..+++.+|||+.++.++..+.|+++..+++++.....+++.+|.+..+.+|++|+.+|+++++
T Consensus 250 ~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~ 329 (1228)
T KOG0055|consen 250 KGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETID 329 (1228)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 040099 364 RKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGE 443 (1236)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 443 (1236)
..|+++.....+......+|+|+|+||+|+||.+++.++|+|+||+|++||++||||||||||||+++||.|||+|++|+
T Consensus 330 ~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~ 409 (1228)
T KOG0055|consen 330 RKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGE 409 (1228)
T ss_pred CCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCce
Confidence 99887654323334556789999999999999999899999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 444 VLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 444 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
|++||.|+++++.+|+|++||+|+|+|.||++||+|||+||+|+++.+++.+||+++++++||.+||+||||.+||+|.+
T Consensus 410 V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~q 489 (1228)
T KOG0055|consen 410 VLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQ 489 (1228)
T ss_pred EEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEe
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g 603 (1236)
|||||||||||||||++||+||||||||||||+++|+.++++|+++++|||+|+|||||+++++||+|+||++|+|+|.|
T Consensus 490 LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G 569 (1228)
T KOG0055|consen 490 LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQG 569 (1228)
T ss_pred CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccchhhhhHHhhhhhhcccccccCCC---CCCCC-CCCCCC-CCCCC--CC-C----cCCCCccccccCCCC
Q 040099 604 THSELLENPYGAYNRLIRLQETCKESEKSAVNNS---DSDNQ-PFASPK-ITTPK--QS-E----TESDFPASEKAKMPP 671 (1236)
Q Consensus 604 ~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~-~~~~~--~~-~----~~~~~~~~~~~~~~~ 671 (1236)
+|+||++.+ |.|.++++.|+.....+..+...+ ..... ..+... ...+. .. . .+++...........
T Consensus 570 ~h~ELi~~~-G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 648 (1228)
T KOG0055|consen 570 THDELIALG-GIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEEDE 648 (1228)
T ss_pred CHHHHHhcc-chHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccccccccccccccccccccc
Confidence 999999995 999999999976543321110000 00000 000000 00000 00 0 000000000011114
Q ss_pred cchhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCch-hHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 672 DVSLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPK-EELMRHSKHWALMFVALGAASLLTSPLSM 750 (1236)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 750 (1236)
..++++++++++|+|+.+++|.+++++.|..+|+++++++.++..+..++ +........|.++|++++++.++..+++.
T Consensus 649 ~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~ 728 (1228)
T KOG0055|consen 649 KVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQH 728 (1228)
T ss_pred cccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999988554 34454555699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 751 YCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKAC 830 (1236)
Q Consensus 751 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~ 830 (1236)
|+|.+++++++.|+|.++|+++++++++|||.++|+ |.|.+|+.+|...++..+++.+..+++++..++++++++|+++
T Consensus 729 ~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~ 807 (1228)
T KOG0055|consen 729 YFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYG 807 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHH
Q 040099 831 WQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQ 910 (1236)
Q Consensus 831 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1236)
|++++++++..|++++..+.+.+.+.....+.+...+++.+...|+++|+|||++|+.|+++.+.|.+.++.+.+...++
T Consensus 808 W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~ 887 (1228)
T KOG0055|consen 808 WRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKR 887 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 911 GLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQ 990 (1236)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 990 (1236)
..+.++.+++++++.++.+++++|+|++++..|.+++.+++.+++++.+.+..+++..++.|++.++..|+.++++++++
T Consensus 888 ~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr 967 (1228)
T KOG0055|consen 888 GLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDR 967 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEE
Q 040099 991 VSKIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHI 1070 (1236)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I 1070 (1236)
+|++++..+.+...++..|+|+|+||+|+||+||+.+||+|+||+|++||++||||||||||||++.||.|||||.+|.|
T Consensus 968 ~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V 1047 (1228)
T KOG0055|consen 968 KPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKV 1047 (1228)
T ss_pred CCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 99877655444445678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCC
Q 040099 1071 TLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQL 1135 (1236)
Q Consensus 1071 ~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~L 1135 (1236)
.|||+||+++++++||++||+|+|||.||++||||||. +.||+|+||.+||+||||.|||+|.+|
T Consensus 1048 ~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QL 1127 (1228)
T KOG0055|consen 1048 KIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQL 1127 (1228)
T ss_pred EECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcC
Confidence 99999999999999999999999999999999999994 789999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecC
Q 040099 1136 SGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGS 1215 (1236)
Q Consensus 1136 SGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt 1215 (1236)
|||||||||||||++|||+||||||||||||.++|+.||++|+++..+||+|+|||||+||++||.|+|+++|+|+|+||
T Consensus 1128 SGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~Gt 1207 (1228)
T KOG0055|consen 1128 SGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQGT 1207 (1228)
T ss_pred CchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhccCcccHHhhhccCC
Q 040099 1216 HESLISTKNGIYTSLIEPHTT 1236 (1236)
Q Consensus 1216 ~~eLl~~~~g~y~~L~~~q~~ 1236 (1236)
|++|+++ +|.|++|++.|.+
T Consensus 1208 H~~L~~~-~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1208 HDELLAK-RGIYFRLVQLQSS 1227 (1228)
T ss_pred HHHHHhC-CCchHHHhhhccC
Confidence 9999995 9999999998864
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.3e-176 Score=1743.37 Aligned_cols=1182 Identities=30% Similarity=0.500 Sum_probs=1012.6
Q ss_pred ccchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHH
Q 040099 43 GRIPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASF 122 (1236)
Q Consensus 43 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1236)
.+.++.++|+|..+.++.+++++++++++.+++.|++|+++++++|.+... ..+..+++++++++++.+++.|
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~-------~~~~~~~~~~~~~~i~~~~~~~ 115 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG-------ENVNDIIFSLVLIGIFQFILSF 115 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------chHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999888888889999999999999999999999999976421 1122334556677778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 123 FQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFF 202 (1236)
Q Consensus 123 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1236)
++.+++.++++++..++|.++|+|++++|++|||+. ++|++++|+++|++.+++.++..+..++..+++++++++++|+
T Consensus 116 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~ 194 (1466)
T PTZ00265 116 ISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLF 194 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 040099 203 KGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSV 282 (1236)
Q Consensus 203 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 282 (1236)
++|+|++++++++|+++++..++.+++++..++.++..+++++.+.|+++|+++||+|+.|+.+.++|++..++..+...
T Consensus 195 ~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~ 274 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYIL 274 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhc--------CcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 283 QEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEK--------GYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAA 354 (1236)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g--------~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s 354 (1236)
+.....++..++..++.++++++++|+|++++.+| .+++|++++++++.+....++..+.+.+..++++.+|
T Consensus 275 k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a 354 (1466)
T PTZ00265 275 KANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEA 354 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999899999999999999999999999986 5899999999888887777778888889999999999
Q ss_pred HHHHHHHhccCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHH
Q 040099 355 AFKFFEAINRKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQ 434 (1236)
Q Consensus 355 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~ 434 (1236)
++|++++++.+|+++... .+...+. .+.|+|+||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|+
T Consensus 355 ~~ri~~ii~~~~~~~~~~-~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~ 432 (1466)
T PTZ00265 355 TNSLYEIINRKPLVENND-DGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIE 432 (1466)
T ss_pred HHHHHHHHcCCCCCCCCC-CCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHH
Confidence 999999999887654321 1122222 24799999999998654457999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEE-CCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCC---------------------------
Q 040099 435 RFYDPQAGEVLI-DGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKT--------------------------- 486 (1236)
Q Consensus 435 ~~~~~~~G~i~~-~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--------------------------- 486 (1236)
|+|+|++|+|++ ||+++++++.+++|++||||+|+|.||++||+|||.+|.+
T Consensus 433 gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (1466)
T PTZ00265 433 RLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRN 512 (1466)
T ss_pred HhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccc
Confidence 999999999999 5799999999999999999999999999999999999742
Q ss_pred ------------------------------CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 487 ------------------------------HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 487 ------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
.+++++++++++.+++++|+.++|+||||.+|++|.+|||||||||+|||
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIAR 592 (1466)
T PTZ00265 513 SCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIAR 592 (1466)
T ss_pred cccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHH
Confidence 24568899999999999999999999999999999999999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhhcCeEEEEECC-----------------
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRNANIIAVIQQG----------------- 597 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~ad~i~vl~~G----------------- 597 (1236)
||+++|+|||||||||+||+++++.|++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 593 All~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~ 672 (1466)
T PTZ00265 593 AIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTK 672 (1466)
T ss_pred HHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccc
Confidence 9999999999999999999999999999999986 489999999999999999999999986
Q ss_pred ------------------------------EEEEEeCcccccccccchhhhhHHhhhhhhcccc-c--c-cC---CCCCC
Q 040099 598 ------------------------------KIVEKGTHSELLENPYGAYNRLIRLQETCKESEK-S--A-VN---NSDSD 640 (1236)
Q Consensus 598 ------------------------------~i~~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~-~--~-~~---~~~~~ 640 (1236)
+|+|+|+|+||++..+|.|+.+++.|........ . + .. .....
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1466)
T PTZ00265 673 DNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYK 752 (1466)
T ss_pred cccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccc
Confidence 5999999999998448999999988754321110 0 0 00 00000
Q ss_pred CCC-CC--CC------CCCCC----CCCCcCCC--Cccccc-c----------CCCCcchhHHHhhhcCCchHHHHHHHH
Q 040099 641 NQP-FA--SP------KITTP----KQSETESD--FPASEK-A----------KMPPDVSLSRLAYLNSPEVPALLLGAI 694 (1236)
Q Consensus 641 ~~~-~~--~~------~~~~~----~~~~~~~~--~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1236)
... .. .. ....+ ......+. ...... + ..+....+.+++....+.++.++++++
T Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (1466)
T PTZ00265 753 DSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTIIAL 832 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 000 00 00 00000 00000000 000000 0 001111344445555556666888888
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 695 ASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVY 774 (1236)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 774 (1236)
++++.+.+.|+++++++.+++.+... .........|.+++++++++.+++.+++.|++.++++++..++|.++|+++++
T Consensus 833 ~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~ 911 (1466)
T PTZ00265 833 SILVAGGLYPVFALLYAKYVSTLFDF-ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILY 911 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999876532 12223355678888888888999999999999999999999999999999999
Q ss_pred CCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 775 MEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKS 854 (1236)
Q Consensus 775 ~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 854 (1236)
+|++|||+.++++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++++|++........+.
T Consensus 912 ~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 991 (1466)
T PTZ00265 912 QEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARL 991 (1466)
T ss_pred CCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997778999999999999999999999999999999999999999999999999988776555444333222221
Q ss_pred HhHHHH--H-------------HHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 040099 855 MKGFSA--N-------------AENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFG 919 (1236)
Q Consensus 855 ~~~~~~--~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1236)
...... . .++...+....+.|+++|+++||+|+.|+++.++|.+..+...+...+...+.++.++
T Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1466)
T PTZ00265 992 TANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWG 1071 (1466)
T ss_pred HHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111110 0 1233556788999999999999999999999999999999999888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcc
Q 040099 920 LSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEY 999 (1236)
Q Consensus 920 ~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~ 999 (1236)
+.+++.+++.++++|+|++++..|.+++|++++++.++.+...++..+.++++++.++..+++|++++++.+++.+..+.
T Consensus 1072 ~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~ 1151 (1466)
T PTZ00265 1072 FSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDN 1151 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCC
Confidence 99999999999999999999999999999999988777776677888999999999999999999999987654422111
Q ss_pred ccCc---cCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----------
Q 040099 1000 TGRT---LENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP----------- 1065 (1236)
Q Consensus 1000 ~~~~---~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~----------- 1065 (1236)
.+.. ++...|.|+|+||+|+||++|+.+||+|+||+|+|||++|||||||||||||+++|+|||+|
T Consensus 1152 ~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~ 1231 (1466)
T PTZ00265 1152 GGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNE 1231 (1466)
T ss_pred cccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccc
Confidence 1111 22346789999999999987666899999999999999999999999999999999999999
Q ss_pred -------------------------------------------CCcEEEECCeecccCChHHHhcceEEEcCCCCCChhh
Q 040099 1066 -------------------------------------------SSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDT 1102 (1236)
Q Consensus 1066 -------------------------------------------~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gT 1102 (1236)
++|+|+|||+||+++++++||++|+||||||+||+||
T Consensus 1232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gT 1311 (1466)
T PTZ00265 1232 HTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMS 1311 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccccc
Confidence 6999999999999999999999999999999999999
Q ss_pred HHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 040099 1103 IRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDI 1167 (1236)
Q Consensus 1103 IreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~ 1167 (1236)
|||||. +.|++++||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||+
T Consensus 1312 IreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~ 1391 (1466)
T PTZ00265 1312 IYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDS 1391 (1466)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCH
Confidence 999994 67899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc--CCCeEEEEecCchhhhhcCEEEEEeC----CEE-EEecChhHHhhccCcccHHhhhccC
Q 040099 1168 ESERVVQDALDQVM--VDRTTLVVAHRLSTIKNAHLIAVVSQ----GMI-VEKGSHESLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1168 ~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~aD~I~Vl~~----G~I-ve~Gt~~eLl~~~~g~y~~L~~~q~ 1235 (1236)
+||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|+|+|+||+++++|.|++|++.|+
T Consensus 1392 ~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~~ 1466 (1466)
T PTZ00265 1392 NSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLAK 1466 (1466)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhcC
Confidence 99999999999984 68999999999999999999999999 995 4999999999844899999998764
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-160 Score=1511.20 Aligned_cols=1121 Identities=23% Similarity=0.279 Sum_probs=862.6
Q ss_pred HHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhH
Q 040099 76 VPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDIAFF 155 (1236)
Q Consensus 76 ~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f 155 (1236)
.-..|.+++.+++.+...... ...-..+++.+++..++..++.--..+...++|.++-..+-..+|+|.++++-..-
T Consensus 217 ~~~~P~lL~~li~~~~~~~~~---~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~ 293 (1381)
T KOG0054|consen 217 GFVGPLLLKKLILFFSEKRLP---LNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSAR 293 (1381)
T ss_pred ccccHHHHHHHHHHhcCCCcc---cchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhc
Confidence 445567889999876543110 01111112222222222222221122333445555555555667888888887766
Q ss_pred hccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 156 DKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQ 235 (1236)
Q Consensus 156 ~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~ 235 (1236)
... .+|+++|.++.|++++.++... +..+....+.+++++.+++..--.-+++.++++.+++.+..++++++++...+
T Consensus 294 ~~~-t~G~ivNlms~D~~ri~~~~~~-~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~ 371 (1381)
T KOG0054|consen 294 GET-TVGEIVNLMSVDAQRLSDAACF-LHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKR 371 (1381)
T ss_pred cCC-CcchhhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 8999999999999999998643 34445555555555444443333335556666666777788899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-H
Q 040099 236 KQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVWYGAKL-I 314 (1236)
Q Consensus 236 ~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v 314 (1236)
..+..+++...++|.++|||+||.|+||+.+.++.++.++++.+...|.....++...+..+...++.+ +.++.+. .
T Consensus 372 ~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~--~tF~~~v~~ 449 (1381)
T KOG0054|consen 372 LMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSV--VTFVVFVLL 449 (1381)
T ss_pred HhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhc
Confidence 999999999999999999999999999999999999999999999888888887776655444444333 3344444 4
Q ss_pred HhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCCCCcEEEEeEEEEC
Q 040099 315 LEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDIRGDIELKDVNFSY 394 (1236)
Q Consensus 315 ~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y 394 (1236)
..+.++....++.+.++..+-.|+..++..+..+.++.+|.+|+.+++..++... ......+..+.+..++++|.+|+|
T Consensus 450 ~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~-~~~~~~~~~~~~~~i~i~~~sfsW 528 (1381)
T KOG0054|consen 450 LGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDP-DSVERSPDEAGENAIEIKNGSFSW 528 (1381)
T ss_pred cCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCc-cccccCCCCCCCceEEEeeeeEec
Confidence 5667888888888888888889999999999999999999999999998654322 211111222334579999999999
Q ss_pred CCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCc
Q 040099 395 PARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLS 474 (1236)
Q Consensus 395 ~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~ 474 (1236)
++.+..+.|+||||+|++|+.+|||||.|||||+|+..|+|..++.+|++.++| .++||||+||+|+
T Consensus 529 ~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g-------------siaYv~Q~pWI~n 595 (1381)
T KOG0054|consen 529 DSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG-------------SVAYVPQQPWIQN 595 (1381)
T ss_pred CCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-------------eEEEeccccHhhC
Confidence 864445699999999999999999999999999999999999999999999998 5999999999999
Q ss_pred hhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCC
Q 040099 475 SSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSAL 554 (1236)
Q Consensus 475 ~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~l 554 (1236)
+||||||.||.|. ++++++++.+.|++..+++.||.|+.|.|||+|.+|||||||||+||||+|+|+||++||||.||+
T Consensus 596 gTvreNILFG~~~-d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAV 674 (1381)
T KOG0054|consen 596 GTVRENILFGSPY-DEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAV 674 (1381)
T ss_pred CcHHHhhhcCccc-cHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhh
Confidence 9999999999874 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHH-HHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHHhhhhhhcccccc
Q 040099 555 DSESGRMVQ-EALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQETCKESEKSA 633 (1236)
Q Consensus 555 D~~~~~~i~-~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~ 633 (1236)
|+|+.++|. ++++.+.++||+|+|||.++.+++||+|++|+||+|+++|+|+||++. .+.|.++..........+ ..
T Consensus 675 Dahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~-~~~~~~l~~~~~~~~~~~-~~ 752 (1381)
T KOG0054|consen 675 DAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS-GGDFAELAHEEESEQEEE-AS 752 (1381)
T ss_pred hHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc-chhHHHHhhccchhhccc-cc
Confidence 999977765 567777889999999999999999999999999999999999999987 677777733222111111 00
Q ss_pred cCCCCCCCCCCCCCC-CCCC---CCCC---cC--CCCccccccCCCCcchhHHHhhhcCCchHHHHHH--HHHHHHhhHH
Q 040099 634 VNNSDSDNQPFASPK-ITTP---KQSE---TE--SDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLG--AIASMTNGII 702 (1236)
Q Consensus 634 ~~~~~~~~~~~~~~~-~~~~---~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 702 (1236)
............... .... ..+. .. +....+++++..+.+++.-+..|.+...+.+... +++.+..-.+
T Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~ 832 (1381)
T KOG0054|consen 753 EKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVL 832 (1381)
T ss_pred cccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 000000000000000 0000 0000 00 0001111223455666666655555433222221 2222222222
Q ss_pred HHHHHHHHHHHHHHhcCchhHHh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 040099 703 IPIFGVMLAAMVNTLNEPKEELM--RHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWF 780 (1236)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~f 780 (1236)
.....++++.+.+.-. .... .....|..+|.+++++..++..++.+.+...+.++++.||.++++++++.||+||
T Consensus 833 ~~~~~~WLs~W~~~~~---~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FF 909 (1381)
T KOG0054|consen 833 QIASNYWLSYWTDDGE---DNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFF 909 (1381)
T ss_pred HHHHHHHHHHhcCCcc---cccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc
Confidence 2222333333322110 1111 3466789999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 040099 781 DEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKSMKGFSA 860 (1236)
Q Consensus 781 d~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~ 860 (1236)
|. +|+|+|+|||++|++.+|..++..+..++..++.++..+++..+..|.+.+ +++|+.+++.+++.. +.+.++
T Consensus 910 dt--TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli---~~~pl~v~~~~~~~~-Y~~tsR 983 (1381)
T KOG0054|consen 910 DT--TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLI---AIIPLGVIYYFVQRY-YLATSR 983 (1381)
T ss_pred CC--CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHH---HHHHHHHHHHHHHHH-HHHHhH
Confidence 95 899999999999999999999999999999999999999888887775544 444554444433333 333466
Q ss_pred HHHHH----HHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 861 NAENM----YEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVG 936 (1236)
Q Consensus 861 ~~~~~----~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 936 (1236)
+.++. ++...+|++|++.|+.|||||+.+++|.+++.+..|.+.+..+-....+.+. ++. +-.++..+++..+
T Consensus 984 eLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWl-a~R--le~ig~~~v~~~a 1060 (1381)
T KOG0054|consen 984 ELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWL-AVR--LELLGNLVVLIAA 1060 (1381)
T ss_pred HHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHH
Confidence 66665 4556899999999999999999999999999999999888765433322222 221 1222222222222
Q ss_pred HHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc--CccCCccccEE
Q 040099 937 AKLVD--HKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTG--RTLENVMGEVQ 1012 (1236)
Q Consensus 937 ~~lv~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~--~~~~~~~g~I~ 1012 (1236)
...+. .+..+.|.+...+.+.......++.+.....+++..+.|.+|+.++.+.++|.+.+.+.. ++..|.+|+|+
T Consensus 1061 l~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~ 1140 (1381)
T KOG0054|consen 1061 LFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIE 1140 (1381)
T ss_pred HHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEE
Confidence 22222 222667877777777778888888888999999999999999999999776622222122 22345789999
Q ss_pred EeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEE
Q 040099 1013 FLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVV 1092 (1236)
Q Consensus 1013 f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V 1092 (1236)
|+|++.+|.+. .++|||||||+|+||||||||||||||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|
T Consensus 1141 f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsII 1219 (1381)
T KOG0054|consen 1141 FEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSII 1219 (1381)
T ss_pred EEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeee
Confidence 99999999754 35799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 040099 1093 SQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLL 1158 (1236)
Q Consensus 1093 ~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlL 1158 (1236)
||||+||+||+|+||+ +.++++++|+++|+|||+.|.|+|.|+|.||||++||||||||++|||+|
T Consensus 1220 PQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvL 1299 (1381)
T KOG0054|consen 1220 PQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVL 1299 (1381)
T ss_pred CCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEE
Confidence 9999999999999995 78999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhc
Q 040099 1159 DEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEP 1233 (1236)
Q Consensus 1159 DEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1233 (1236)
|||||++|++|+..||++|++.|++||||+||||++||.+||||+|||+|+|+|+|+|++|++++++.|++++.+
T Consensus 1300 DEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~ 1374 (1381)
T KOG0054|consen 1300 DEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKE 1374 (1381)
T ss_pred ecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876643
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.6e-158 Score=1579.57 Aligned_cols=1133 Identities=20% Similarity=0.258 Sum_probs=846.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 63 LVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSF 142 (1236)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 142 (1236)
+++.++.++..++....|++++.++|.+... +.. . ..... +..+++..++..++..-..+...+++.++...++..
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~-~~~-~-~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 379 (1622)
T PLN03130 304 WLGGFFKIGNDLSQFVGPLLLNLLLESMQNG-EPA-W-IGYIY-AFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAA 379 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccc-h-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555666666777788999999876432 110 0 11111 111111111111111111122446788888889999
Q ss_pred HHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 040099 143 YLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAG 222 (1236)
Q Consensus 143 ~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~ 222 (1236)
+|+|+++++..++++. ++|++++++++|++.+++++. .+..++..++.+++++++++..-...+++.++++.+++.+.
T Consensus 380 i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~ 457 (1622)
T PLN03130 380 VFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQ 457 (1622)
T ss_pred HHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 999999999999999999974 45666666666666555544322222222222333444556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 040099 223 VVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSA 302 (1236)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1236)
.++.+++++..++.++..+++.+.+.|.++|+++||+|++|+.+.+++++..++..+...+.....++...+...+. .
T Consensus 458 ~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~--~ 535 (1622)
T PLN03130 458 TFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIP--V 535 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 67788888889999999999999999999999999999999999999999888877776666655554433322221 1
Q ss_pred HHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCCC
Q 040099 303 YGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDIR 382 (1236)
Q Consensus 303 ~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 382 (1236)
.+.++++|++.+.+|.+|+|.+++++.++..+..|+..+...+..+.++.+|++||.++++.++..+... .......
T Consensus 536 ~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~---~~~~~~~ 612 (1622)
T PLN03130 536 LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN---PPLEPGL 612 (1622)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC---CcccCCC
Confidence 3456678999999999999999999988888899999999999999999999999999998654322111 1111123
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCC-cEEEECCeecCCCCHHHHhc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQA-GEVLIDGVNLKEFQLKWIRE 461 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~~~g~~~~~~~~~~~r~ 461 (1236)
+.|+++|++|+|+.++++++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|.+ |+
T Consensus 613 ~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l-------------~~ 679 (1622)
T PLN03130 613 PAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI-------------RG 679 (1622)
T ss_pred CceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-------------cC
Confidence 46999999999985444679999999999999999999999999999999999999999 99985 45
Q ss_pred ceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 462 KIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
+|+||+|+||||++||||||.||+|. ++++++++++.|++++++..||+|++|.|||+|.+|||||||||+||||+|++
T Consensus 680 ~Iayv~Q~p~LfngTIreNI~fg~~~-d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~ 758 (1622)
T PLN03130 680 TVAYVPQVSWIFNATVRDNILFGSPF-DPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSN 758 (1622)
T ss_pred eEEEEcCccccCCCCHHHHHhCCCcc-cHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999874 88999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHH-HHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhH
Q 040099 542 PRILLLDEATSALDSESGRMVQ-EALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~-~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~ 620 (1236)
|+||||||||||||+++++.+. ++++...+++|+|+||||++.++.||+|++|++|+|+++|+|+|++++ ++.|.+++
T Consensus 759 ~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~-~~~~~~l~ 837 (1622)
T PLN03130 759 SDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN-GPLFQKLM 837 (1622)
T ss_pred CCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc-chhHHHHH
Confidence 9999999999999999998875 567777789999999999999999999999999999999999999986 68888887
Q ss_pred HhhhhhhcccccccCCC-C-CCCCCCCC---CC-C-CCCCCCCc--CCCCccccccCCCCcchhHHHhhhcCC-c-hHHH
Q 040099 621 RLQETCKESEKSAVNNS-D-SDNQPFAS---PK-I-TTPKQSET--ESDFPASEKAKMPPDVSLSRLAYLNSP-E-VPAL 689 (1236)
Q Consensus 621 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~---~~-~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 689 (1236)
..+...++......... . ........ .. . .....+.. .......++++..+.+++..+..|.+. . ++.+
T Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~ 917 (1622)
T PLN03130 838 ENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVV 917 (1622)
T ss_pred HhcccccccccccccccccccccccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHH
Confidence 65432111100000000 0 00000000 00 0 00000000 000000111222333445545444332 2 2222
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 690 LLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCF 769 (1236)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 769 (1236)
.+.+++.++.........+++..+.+.... .......|..+|++++++..++.+++.+++.+.+.+++.++|.+++
T Consensus 918 ~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~----~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~ 993 (1622)
T PLN03130 918 MILFLCYVLTEVFRVSSSTWLSEWTDQGTP----KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAML 993 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccc----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222222222233333333332111 0122345777888888888889999999999999999999999999
Q ss_pred HHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-
Q 040099 770 EKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITG- 848 (1236)
Q Consensus 770 ~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~- 848 (1236)
++++++|++||| .+++|+++||+++|++.++..++..+..++..++.+++.++++++.+|...+ +++|+.+++.
T Consensus 994 ~~ll~~p~~ffd--~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~---~~~pl~~~~~~ 1068 (1622)
T PLN03130 994 GSILRAPMSFFH--TNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLW---AIMPLLVLFYG 1068 (1622)
T ss_pred HHHHcCCHHHhc--cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 999999999999 5899999999999999999999999999999998888888887777764332 2333333222
Q ss_pred --HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 849 --HIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFF 926 (1236)
Q Consensus 849 --~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1236)
.++.+..+...+......+...+++.|+++|++|||+|+.++++.+++.+..+...+..........+...... .
T Consensus 1069 ~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~---~ 1145 (1622)
T PLN03130 1069 AYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLE---T 1145 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 22222223333333344556789999999999999999999988888877776655543332222212111111 1
Q ss_pred HHHHHHHHHHHHHHhhcC-CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccc
Q 040099 927 MAYAVTFYVGAKLVDHKQ-AT-----FTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYT 1000 (1236)
Q Consensus 927 ~~~~~~~~~g~~lv~~~~-~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~ 1000 (1236)
+..+++++.+...+..+. .. .+.+..++.+......++..+......++....+.+|+.++++.+++.+.....
T Consensus 1146 ~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~ 1225 (1622)
T PLN03130 1146 LGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIEN 1225 (1622)
T ss_pred HHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccC
Confidence 122222333333343322 11 122222333444555666667777788899999999999999876654321111
Q ss_pred cCcc--CCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecc
Q 040099 1001 GRTL--ENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQ 1078 (1236)
Q Consensus 1001 ~~~~--~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~ 1078 (1236)
..++ .+..|.|+|+||+|+|++. .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+
T Consensus 1226 ~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~ 1304 (1622)
T PLN03130 1226 NRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDIS 1304 (1622)
T ss_pred CCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecc
Confidence 1111 2346899999999999643 246999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHhcceEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHH
Q 040099 1079 KLQVKWLRQQMGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVA 1144 (1236)
Q Consensus 1079 ~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRla 1144 (1236)
++++++||++|++|||||+||+|||||||+ +.++++++|.++|+||||.|||+|.+||||||||||
T Consensus 1305 ~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrla 1384 (1622)
T PLN03130 1305 KFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLS 1384 (1622)
T ss_pred cCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999994 678999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccC
Q 040099 1145 IARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1145 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~ 1224 (1236)
|||||+|+|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++||||+||++|+|+|+|+|+||+++++
T Consensus 1385 LARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~ 1464 (1622)
T PLN03130 1385 LARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEG 1464 (1622)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999767
Q ss_pred cccHHhhhcc
Q 040099 1225 GIYTSLIEPH 1234 (1236)
Q Consensus 1225 g~y~~L~~~q 1234 (1236)
|.|++|++.+
T Consensus 1465 g~f~~L~~~~ 1474 (1622)
T PLN03130 1465 SAFSKMVQST 1474 (1622)
T ss_pred CHHHHHHHHc
Confidence 9999999765
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.3e-157 Score=1575.29 Aligned_cols=1131 Identities=19% Similarity=0.250 Sum_probs=848.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 63 LVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSF 142 (1236)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 142 (1236)
+++.++.++..++....|++++.++|.+... +.. . ... .++..+++..++..++.....+...+.+.++...++..
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~-~~~-~-~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~ 379 (1495)
T PLN03232 304 WLGGIFKIGHDLSQFVGPVILSHLLQSMQEG-DPA-W-VGY-VYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAA 379 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccc-c-hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666767788999999976432 110 0 111 11111111122222222222233357788888888999
Q ss_pred HHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HHH
Q 040099 143 YLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIP---PLV 219 (1236)
Q Consensus 143 ~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p---~~~ 219 (1236)
+|+|+++++..++++. ++|++++++++|++.+++++ ..+..++..++.+++++++++ +.+++++++.++ +++
T Consensus 380 i~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~---~~lg~~~l~~~~v~~l~~ 454 (1495)
T PLN03232 380 IFHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLY---QQLGVASLFGSLILFLLI 454 (1495)
T ss_pred HHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHH
Confidence 9999999999999988 99999999999999999986 455556655555554444332 334443333322 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 040099 220 IAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFII 299 (1236)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1236)
.+..++.++.++..++.++..+++.+.+.|.++|+++||+|++|+.+.+++++..+++.+...+.....++...+.....
T Consensus 455 pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~ 534 (1495)
T PLN03232 455 PLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIP 534 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566788899999999999999999999999999999999999999999999998888887777666555433222211
Q ss_pred HHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCC
Q 040099 300 FSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLD 379 (1236)
Q Consensus 300 ~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~ 379 (1236)
..+.++++|++++.+|.+|+|.+++++.++..+..|+..++..+..+.++.+|++|+.++++.+++.+... ....
T Consensus 535 --~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~---~~~~ 609 (1495)
T PLN03232 535 --VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN---PPLQ 609 (1495)
T ss_pred --HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc---CCcC
Confidence 23335688999999999999999999999999999999999999999999999999999998765432111 1111
Q ss_pred CCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH
Q 040099 380 DIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 380 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 459 (1236)
...+.|+++|++|+|++++++++|+|+||+|++||+++||||||||||||+++|+|+|+|++|.+. ++
T Consensus 610 ~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~ 677 (1495)
T PLN03232 610 PGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VI 677 (1495)
T ss_pred CCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------Ee
Confidence 123479999999999854456799999999999999999999999999999999999999998763 25
Q ss_pred hcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 460 REKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
|++|+||+|+||||++||||||+||++ .++++++++++.|++++++..+|+|++|.|||+|.+||||||||||||||++
T Consensus 678 ~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly 756 (1495)
T PLN03232 678 RGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVY 756 (1495)
T ss_pred cCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHh
Confidence 779999999999999999999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHH-HHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhh
Q 040099 540 KDPRILLLDEATSALDSESGRMVQE-ALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNR 618 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~ 618 (1236)
++|+||||||||||||+++++.+.+ +++...+++|+|+||||++.++.||+|++|++|+|+++|+|+|++++ ++.|.+
T Consensus 757 ~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~ 835 (1495)
T PLN03232 757 SNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKK 835 (1495)
T ss_pred cCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHH
Confidence 9999999999999999999998865 46666789999999999999999999999999999999999999987 788988
Q ss_pred hHHhhhhhhcccccccCCCCCCC-CCCCCCC-CCCC-CCC--CcC-CCCccccccCCCCcchhHHHhhhcCCch--HHHH
Q 040099 619 LIRLQETCKESEKSAVNNSDSDN-QPFASPK-ITTP-KQS--ETE-SDFPASEKAKMPPDVSLSRLAYLNSPEV--PALL 690 (1236)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~-~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 690 (1236)
+++.+...++..++....+.... ....... .... ... ... +.....++++..+.+++..+++|.+... +.+.
T Consensus 836 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~ 915 (1495)
T PLN03232 836 LMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVM 915 (1495)
T ss_pred HHHhcccccccccccccccccccccccccccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHH
Confidence 88655421111100000000000 0000000 0000 000 000 0000011122233445555555544322 2222
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 691 LGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFE 770 (1236)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 770 (1236)
+.+++.++..+......+++..+.+. ..........|+.+|++++++..++.+++.+++...+.+++.++|.++++
T Consensus 916 ~~~~~~~~~~~~~~~~~~wl~~w~~~----~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 991 (1495)
T PLN03232 916 ILLVCYLTTEVLRVSSSTWLSIWTDQ----STPKSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLN 991 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111111111111222222222211 10001123568888999999999999999999999999999999999999
Q ss_pred HHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--
Q 040099 771 KVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITG-- 848 (1236)
Q Consensus 771 ~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~-- 848 (1236)
+++++|++||| .+++|+++||+++|++.++..++..+..++..++.+++++++++..++...+ +++|+.+++.
T Consensus 992 ~ll~~p~~ff~--~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~---~~~~~~~~~~~~ 1066 (1495)
T PLN03232 992 SILRAPMLFFH--TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLW---AIMPLLILFYAA 1066 (1495)
T ss_pred HHHcCCeeeeC--cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 99999999999 5899999999999999999999999998888888888777777666653322 2233333222
Q ss_pred -HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 849 -HIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFM 927 (1236)
Q Consensus 849 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (1236)
.++.+..+...+......+...+++.|+++|+++||+|+.++++.+++.+..+...+..........+ .... +..+
T Consensus 1067 ~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-l~~~--~~~~ 1143 (1495)
T PLN03232 1067 YLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRW-LTIR--LETL 1143 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHH
Confidence 22222223333344445566789999999999999999999998888887777666544332222211 1111 1112
Q ss_pred HHHHHHHHHHHHHh-hcCC----CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc
Q 040099 928 AYAVTFYVGAKLVD-HKQA----TFTE-VFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTG 1001 (1236)
Q Consensus 928 ~~~~~~~~g~~lv~-~~~~----~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~ 1001 (1236)
+.+++++.+...+. .+.+ .+.. +..++.+......++..+...+.+++.+..+.+|+.++++.+++.+......
T Consensus 1144 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~ 1223 (1495)
T PLN03232 1144 GGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENN 1223 (1495)
T ss_pred HHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCC
Confidence 22223333333333 2322 1122 2223344445566777888888999999999999999998766543211111
Q ss_pred Ccc--CCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc
Q 040099 1002 RTL--ENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK 1079 (1236)
Q Consensus 1002 ~~~--~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~ 1079 (1236)
.++ .+..|.|+|+||+|+|++. .++||+|+||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+|+++
T Consensus 1224 ~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~ 1302 (1495)
T PLN03232 1224 RPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAK 1302 (1495)
T ss_pred CCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhh
Confidence 111 2346889999999999643 2469999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHhcceEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHH
Q 040099 1080 LQVKWLRQQMGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAI 1145 (1236)
Q Consensus 1080 i~~~~lR~~i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaL 1145 (1236)
+++++||++|++|||||+||+|||||||+ +.++++++++++|+||||.|||+|.+|||||||||||
T Consensus 1303 i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaL 1382 (1495)
T PLN03232 1303 FGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSL 1382 (1495)
T ss_pred CCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999994 6789999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCc
Q 040099 1146 ARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNG 1225 (1236)
Q Consensus 1146 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g 1225 (1236)
||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++|+++||||+||++|+|+|+|+|+||+++++|
T Consensus 1383 ARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~ 1462 (1495)
T PLN03232 1383 ARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTS 1462 (1495)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998667
Q ss_pred ccHHhhhcc
Q 040099 1226 IYTSLIEPH 1234 (1236)
Q Consensus 1226 ~y~~L~~~q 1234 (1236)
.|++|++.+
T Consensus 1463 ~f~~l~~~~ 1471 (1495)
T PLN03232 1463 AFFRMVHST 1471 (1495)
T ss_pred HHHHHHHHh
Confidence 999999765
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.9e-152 Score=1528.44 Aligned_cols=1140 Identities=19% Similarity=0.227 Sum_probs=877.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 64 VGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFY 143 (1236)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~ 143 (1236)
.++++.++..++....|++++.++|.+....+. .. .. ..++..++++.++..++.....+...+.+.++...++..+
T Consensus 321 ~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~-~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i 397 (1522)
T TIGR00957 321 MSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAP-DW-QG-YFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAV 397 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cc-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555566666778899999976432111 00 01 1112222233333344443344556778999999999999
Q ss_pred HHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 040099 144 LETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGV 223 (1236)
Q Consensus 144 ~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~ 223 (1236)
|+|+++++..++++. ++|++++++++|++++.++. ..+..++..++.+++++++++..-...+++.++++++++.+..
T Consensus 398 y~K~L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~ 475 (1522)
T TIGR00957 398 YRKALVITNSARKSS-TVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNA 475 (1522)
T ss_pred HHHHHhCChhhcCCC-CHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 99999999999999999865 3455566666665555554433322244555566667777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 040099 224 VMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAY 303 (1236)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (1236)
++.+++++..++.++..++..+.+.|.++||++||+|++|+.+.+++++.++++.+...+......+........ ...
T Consensus 476 ~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~--~~~ 553 (1522)
T TIGR00957 476 VMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCT--PFL 553 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 888999999999999999999999999999999999999999999999998888777666655544432221111 112
Q ss_pred HHHHHHHHHHHHh--cCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCC
Q 040099 304 GLGVWYGAKLILE--KGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDI 381 (1236)
Q Consensus 304 ~~~~~~g~~~v~~--g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~ 381 (1236)
+.++.++.+.+.. +.++.+.+++.+.++..+..|+..+...+..++++.+|.+||.++++.+++.+.........+..
T Consensus 554 ~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~ 633 (1522)
T TIGR00957 554 VALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGE 633 (1522)
T ss_pred HHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCC
Confidence 2233456666664 56889988888877777888999999999999999999999999998654322110000000111
Q ss_pred CCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhc
Q 040099 382 RGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIRE 461 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~ 461 (1236)
.+.|+++|++|+|++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 634 ~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 699 (1522)
T TIGR00957 634 GNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG------------- 699 (1522)
T ss_pred CCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------
Confidence 2369999999999742 35799999999999999999999999999999999999999999999987
Q ss_pred ceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 462 KIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
+|+||+|+||+|++||+|||.+|.+ .++++++++++.|++.+++..+|+|++|.+|++|.+|||||||||+||||++++
T Consensus 700 ~i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~ 778 (1522)
T TIGR00957 700 SVAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSN 778 (1522)
T ss_pred EEEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 5999999999999999999999976 467888899999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHH---HccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhh
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDR---VMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNR 618 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~ 618 (1236)
|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+|+++|+|++++++ ++.|.+
T Consensus 779 ~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~~~~ 857 (1522)
T TIGR00957 779 ADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR-DGAFAE 857 (1522)
T ss_pred CCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc-chhHHH
Confidence 999999999999999999999998853 4568999999999999999999999999999999999999986 678888
Q ss_pred hHHhhhhhhccc--ccc------cCCCCC---CC---------CCCCC----CCCCCCC-------C-C-CcCC-C----
Q 040099 619 LIRLQETCKESE--KSA------VNNSDS---DN---------QPFAS----PKITTPK-------Q-S-ETES-D---- 660 (1236)
Q Consensus 619 ~~~~~~~~~~~~--~~~------~~~~~~---~~---------~~~~~----~~~~~~~-------~-~-~~~~-~---- 660 (1236)
+...+...+..+ ++. .+.... +. ..... ....... . + +..+ +
T Consensus 858 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1522)
T TIGR00957 858 FLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETW 937 (1522)
T ss_pred HHHhhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchh
Confidence 776443211100 000 000000 00 00000 0000000 0 0 0000 0
Q ss_pred CccccccCCCCcchhHHHhhhcCC-chHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHH
Q 040099 661 FPASEKAKMPPDVSLSRLAYLNSP-EVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALG 739 (1236)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 739 (1236)
....++++..+.+.+..+++|.+. +++..++.+++.++...+.....+++..+.+..... ........|..+|++++
T Consensus 938 ~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~--~~~~~~~~~~~iy~~l~ 1015 (1522)
T TIGR00957 938 KLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVN--GTQNNTSLRLSVYGALG 1015 (1522)
T ss_pred hhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--CCCCCcchHHHHHHHHH
Confidence 000011112233344444433332 222222222222222233333444444444321100 00112335666888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 740 AASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATA 819 (1236)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~ 819 (1236)
++..++.++..+++.+.+.++++++|.+++++++++|++||| .+++|+++||+++|++.++..++..+..++..++.+
T Consensus 1016 i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~ 1093 (1522)
T TIGR00957 1016 ILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE--RTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNV 1093 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888999999999999999999999999999999 489999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHH
Q 040099 820 VVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKK 899 (1236)
Q Consensus 820 v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~ 899 (1236)
++.++++++.+|.+++++++++++.++...++.+..+...+......+...+++.|+++|+++||+|+.++++.+++.+.
T Consensus 1094 i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~ 1173 (1522)
T TIGR00957 1094 IGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLK 1173 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHH
Confidence 99888888888877666666555555555555555555455555566778899999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 900 CEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVD-HKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAK 978 (1236)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1236)
.+...+..+.......+......++ ...++++++...+. .+.++.|.+.+++.+...+..++..+...+.+++.+.
T Consensus 1174 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~ 1250 (1522)
T TIGR00957 1174 VDENQKAYYPSIVANRWLAVRLECV---GNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNI 1250 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877665444443333322222 22233444444443 5789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCccccCcc--CCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHH
Q 040099 979 SSAASVFGLIDQVSKIDSSEYTGRTL--ENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVI 1056 (1236)
Q Consensus 979 ~a~~ri~~~~~~~~~~~~~~~~~~~~--~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~ 1056 (1236)
.+++|+.++++.+++.+.......++ .+..|.|+|+||+|+|+++. ++||+|+||+|+|||++|||||||||||||+
T Consensus 1251 ~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGsGKSTL~ 1329 (1522)
T TIGR00957 1251 VAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGAGKSSLT 1329 (1522)
T ss_pred HHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCCCHHHHH
Confidence 99999999997765533111111111 13568999999999998653 4699999999999999999999999999999
Q ss_pred HHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhh
Q 040099 1057 SLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQE 1122 (1236)
Q Consensus 1057 ~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~ 1122 (1236)
++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||+ +.++++++|.++|+
T Consensus 1330 ~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~ 1409 (1522)
T TIGR00957 1330 LGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPD 1409 (1522)
T ss_pred HHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCcc
Confidence 9999999999999999999999999999999999999999999999999995 67899999999999
Q ss_pred chhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEE
Q 040099 1123 GYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLI 1202 (1236)
Q Consensus 1123 Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I 1202 (1236)
||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++|+.+||||
T Consensus 1410 GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrI 1489 (1522)
T TIGR00957 1410 KLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRV 1489 (1522)
T ss_pred CCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCEEEEecChhHHhhccCcccHHhhhccC
Q 040099 1203 AVVSQGMIVEKGSHESLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1203 ~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q~ 1235 (1236)
+|||+|+|+|+|+|+||+++ +|.|++|+++.+
T Consensus 1490 lVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~g 1521 (1522)
T TIGR00957 1490 IVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDAG 1521 (1522)
T ss_pred EEEECCEEEEECCHHHHHhC-CCHHHHHHHHcC
Confidence 99999999999999999997 899999998653
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.9e-145 Score=1458.04 Aligned_cols=1141 Identities=17% Similarity=0.209 Sum_probs=868.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 63 LVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSF 142 (1236)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 142 (1236)
++.+++.++..++....|++++.+++.+... +. . ......+++.++++.++..++.....+...+.+.++...++..
T Consensus 247 ~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~-~~-~-~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~ 323 (1560)
T PTZ00243 247 WWQIPFKLLSDVCTLTLPVLLKYFVKFLDAD-NA-T-WGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNAL 323 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-Cc-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666677777778899999865322 11 1 0101112222333344455555556677778888999999999
Q ss_pred HHHHHHhCChhhHh--ccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 040099 143 YLETILRQDIAFFD--KEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVI 220 (1236)
Q Consensus 143 ~~~~l~~~~~~~f~--~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~ 220 (1236)
+|+|+++++...+. +. ++|++++.+++|++.+.+++.. +..++..++.+++++++++.+....+++.++++++++.
T Consensus 324 if~K~l~ls~~~~~~~~~-~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~p 401 (1560)
T PTZ00243 324 IFEKCFTISSKSLAQPDM-NTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLP 401 (1560)
T ss_pred HHHHHHhCChhhhCCCCC-CHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999998775 44 7899999999999999999844 56777888888888888877777788888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 040099 221 AGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIF 300 (1236)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1236)
+..++.++..+..++..+..++..+.+.|.++|||+||.+++|+.+.+++++.++++.+...+.....++...+......
T Consensus 402 l~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~ 481 (1560)
T PTZ00243 402 LNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPT 481 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999998888877776666655444433333
Q ss_pred HHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcc----cc-c---
Q 040099 301 SAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEID----LC-C--- 372 (1236)
Q Consensus 301 ~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~----~~-~--- 372 (1236)
+.. ++.++++.+..|.+|++.+++++.++..+..|+..+...+..+.++.+|++||.++|+.++... +. +
T Consensus 482 l~~--~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~ 559 (1560)
T PTZ00243 482 LMI--AVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWR 559 (1560)
T ss_pred HHH--HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhcc
Confidence 322 2346778888999999999999999999999999999999999999999999999997653100 00 0
Q ss_pred ------c--C--------------CCC---------------------------CCCCCCcEEEEeEEEECCCC------
Q 040099 373 ------V--N--------------GKK---------------------------LDDIRGDIELKDVNFSYPAR------ 397 (1236)
Q Consensus 373 ------~--~--------------~~~---------------------------~~~~~~~i~~~~v~f~y~~~------ 397 (1236)
. . +.. .....+.+.++|++|+++..
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (1560)
T PTZ00243 560 EQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIV 639 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccccccc
Confidence 0 0 000 00011347788887765310
Q ss_pred -------------------------------CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 040099 398 -------------------------------PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLI 446 (1236)
Q Consensus 398 -------------------------------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 446 (1236)
+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~ 719 (1560)
T PTZ00243 640 EGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWA 719 (1560)
T ss_pred cccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEE
Confidence 1245899999999999999999999999999999999999999999986
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 447 DGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 447 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
+ ++||||+|+|++|++||+|||.++.+. +.+++.++++.++++++++.+|+|++|.+|++|.+|||
T Consensus 720 ~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSG 785 (1560)
T PTZ00243 720 E-------------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSG 785 (1560)
T ss_pred C-------------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCH
Confidence 4 479999999999999999999998753 56678888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHH-HHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCc
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEA-LDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~ 605 (1236)
||||||+||||++++|+|||||||||+||+++++.+.+. +....+++|+|+|||+++.+..||+|++|++|+++++|++
T Consensus 786 GQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~ 865 (1560)
T PTZ00243 786 GQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGSS 865 (1560)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCH
Confidence 999999999999999999999999999999998887664 4445568999999999999999999999999999999999
Q ss_pred ccccccccchhhhhHHhhhhhhcccccccC-C-CCCCCCCC---C-CCCCCCCCC-CCcC---C-C----CccccccCCC
Q 040099 606 SELLENPYGAYNRLIRLQETCKESEKSAVN-N-SDSDNQPF---A-SPKITTPKQ-SETE---S-D----FPASEKAKMP 670 (1236)
Q Consensus 606 ~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~---~-~~~~~~~~~-~~~~---~-~----~~~~~~~~~~ 670 (1236)
+++++. +.|.++........+....... + ...+..+. . ......... .+.. . + ....++++..
T Consensus 866 ~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~ 943 (1560)
T PTZ00243 866 ADFMRT--SLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRLMTREEKAS 943 (1560)
T ss_pred HHHHhC--hHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchhhhHHHHhc
Confidence 999874 4577665432211110000000 0 00000000 0 000000000 0000 0 0 0001111122
Q ss_pred CcchhHHHhhhcCCch-HHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 671 PDVSLSRLAYLNSPEV-PALLLGAIAS-MTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPL 748 (1236)
Q Consensus 671 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 748 (1236)
+.++++.+..|.+... ..+.+..++. ++..++.....+++..+.... .......|+.+|+++.++..+..++
T Consensus 944 g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~------~~~~~~~~l~~y~~~~~~~~~~~~l 1017 (1560)
T PTZ00243 944 GSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRS------FKLSAATYLYVYLGIVLLGTFSVPL 1017 (1560)
T ss_pred CcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cCCCcccHHHHHHHHHHHHHHHHHH
Confidence 3344444443332211 1111111111 111111112222222221110 1112345667777777776677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 749 SMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFK 828 (1236)
Q Consensus 749 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~ 828 (1236)
+.+.....+.+.++++|.++|++++++|++||| .+++|+++||+++|++.++..++..+..++..++.+++.++++++
T Consensus 1018 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd--~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~ 1095 (1560)
T PTZ00243 1018 RFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFD--TTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSA 1095 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhcc--CCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777788888999999999999999999999 489999999999999999999999999999999999988888888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHH
Q 040099 829 ACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGI 908 (1236)
Q Consensus 829 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~ 908 (1236)
.+|.+.++++.+..+.+.+..++.+..+...+......+...+++.|+++|+++||+|+.++++.++|.+..+...+..+
T Consensus 1096 ~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~ 1175 (1560)
T PTZ00243 1096 SQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSY 1175 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHH
Confidence 88754433322222222223333333344444444556677899999999999999999999999999999998888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 909 RQGLMSGIGFGLSFFFFFMAYAVTFYVGAK--LVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFG 986 (1236)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 986 (1236)
.......+......++..+..+++.+++.. +...+.+++|.+..++.+......++..+...+.+++.++.+.+|+.+
T Consensus 1176 ~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~ 1255 (1560)
T PTZ00243 1176 LENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLY 1255 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665555554444444444443333333333 333455788887777777788888999999999999999999999999
Q ss_pred HHhcccccCCCc-------------------------cccC----ccCCccccEEEeEEEEECCCCCCcccccceeEEec
Q 040099 987 LIDQVSKIDSSE-------------------------YTGR----TLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIP 1037 (1236)
Q Consensus 987 ~~~~~~~~~~~~-------------------------~~~~----~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~ 1037 (1236)
+++..++.+... .... +.++..|.|+|+||+|+|++. .++||+||||+|+
T Consensus 1256 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~ 1334 (1560)
T PTZ00243 1256 YTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIA 1334 (1560)
T ss_pred HHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEEC
Confidence 997543321000 0000 011245889999999999754 3469999999999
Q ss_pred CCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------
Q 040099 1038 PGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA--------- 1108 (1236)
Q Consensus 1038 ~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~--------- 1108 (1236)
|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||+
T Consensus 1335 ~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdee 1414 (1560)
T PTZ00243 1335 PREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAE 1414 (1560)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred -----HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC-CCEEEEecCCCCCCHHHHHHHHHHHHHHcC
Q 040099 1109 -----EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE-PKILLLDEATSALDIESERVVQDALDQVMV 1182 (1236)
Q Consensus 1109 -----~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~-p~ILlLDEaTSaLD~~te~~I~~~L~~~~~ 1182 (1236)
+.++++++|.++|+||||.|||+|.+|||||||||||||||+++ |+|||||||||+||++||+.|+++|++.++
T Consensus 1415 I~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~ 1494 (1560)
T PTZ00243 1415 VWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFS 1494 (1560)
T ss_pred HHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCC
Confidence 67899999999999999999999999999999999999999996 899999999999999999999999999999
Q ss_pred CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhccC
Q 040099 1183 DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1183 ~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q~ 1235 (1236)
+||+|+||||++|+++||+|+||++|+|+|+|+|+||+++++|.|++|++.++
T Consensus 1495 ~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1495 AYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred CCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 99999999999999999999999999999999999999876899999997653
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.1e-141 Score=1424.08 Aligned_cols=1129 Identities=17% Similarity=0.213 Sum_probs=842.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 69 ATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFYLETIL 148 (1236)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~ 148 (1236)
.++..++....|++++.+++.+........ .....++..++++.++..++.....+.....+.++...+...+|+|++
T Consensus 89 ~~~~~~~~~~~P~ll~~li~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 89 LYFGEATKAVQPLLLGRIIASYDPFNAPER--EIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555667789999987632211100 111112223333334444555555666667788888888888899999
Q ss_pred hCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 149 RQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGVVMIKL 228 (1236)
Q Consensus 149 ~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~ 228 (1236)
+++...+++. ++|++++++++|++++.+++... ..++..++.++++++++++.....+++.++++++++.+..+++++
T Consensus 167 ~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 167 KLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred hCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 99999999999999999987654 445566676777777777766777888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 040099 229 VGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVW 308 (1236)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (1236)
+.+..++.++..+++.+.+.|.++||++||+|++|+.+.+++++.+++..+...+......+...+..+. ...+.++.
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 322 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFS--GFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988888877776654433332222 23344566
Q ss_pred HHHHHHHhcCcChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCCCCcEEE
Q 040099 309 YGAKLILEKGYSGGDVMSVIFGVLIGSMSLG-QASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDIRGDIEL 387 (1236)
Q Consensus 309 ~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 387 (1236)
++++.+..+ ++++.+++++.++..+..|+. .++..+..+.++.+|++||.++++.++..+.. .. .....+++
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~----~~--~~~~~i~~ 395 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLE----YN--LTTTEVEM 395 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc----cc--CCCCceEE
Confidence 677776654 688999998887777777774 68888999999999999999999865432111 00 11235999
Q ss_pred EeEEEECCCCC-------------------------------CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcC
Q 040099 388 KDVNFSYPARP-------------------------------DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRF 436 (1236)
Q Consensus 388 ~~v~f~y~~~~-------------------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 436 (1236)
+|++|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999995310 13689999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCcccc
Q 040099 437 YDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTN 516 (1236)
Q Consensus 437 ~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 516 (1236)
++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+++++.++++.|++.+++..+|+|++|.
T Consensus 476 ~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~ 541 (1490)
T TIGR01271 476 LEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTV 541 (1490)
T ss_pred CCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccccc
Confidence 999999999998 5999999999999999999999975 45667888889999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHH-HHHHccCceEEEEecCchhHhhcCeEEEEE
Q 040099 517 VGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEA-LDRVMINRTTVIVSHRLSLIRNANIIAVIQ 595 (1236)
Q Consensus 517 ~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~ad~i~vl~ 595 (1236)
+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+. +.++.+++|+|+|||+++.+..||+|++|+
T Consensus 542 vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~ 621 (1490)
T TIGR01271 542 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLH 621 (1490)
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999974 677778999999999999999999999999
Q ss_pred CCEEEEEeCcccccccccchhhhhHHhhhh------hh--------------c--------ccc--cc--cCCCCC-C--
Q 040099 596 QGKIVEKGTHSELLENPYGAYNRLIRLQET------CK--------------E--------SEK--SA--VNNSDS-D-- 640 (1236)
Q Consensus 596 ~G~i~~~g~~~~l~~~~~~~y~~~~~~~~~------~~--------------~--------~~~--~~--~~~~~~-~-- 640 (1236)
+|+|++.|+++++... ++.|.+.+..... .. . .+. .. .+.... .
T Consensus 622 ~g~i~~~g~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1490)
T TIGR01271 622 EGVCYFYGTFSELQAK-RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKR 700 (1490)
T ss_pred CCEEEEEcCHHHHHhc-ChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999875 5556555421000 00 0 000 00 000000 0
Q ss_pred ----------------------------CCC--C-----------CC--------CCCCC--------------------
Q 040099 641 ----------------------------NQP--F-----------AS--------PKITT-------------------- 651 (1236)
Q Consensus 641 ----------------------------~~~--~-----------~~--------~~~~~-------------------- 651 (1236)
... . +. +....
T Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1490)
T TIGR01271 701 KQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMT 780 (1490)
T ss_pred cccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccc
Confidence 000 0 00 00000
Q ss_pred CC--CC-----------------C-----cC---------CC-----Cc-----------cccccCCCCcchhHHHhhhc
Q 040099 652 PK--QS-----------------E-----TE---------SD-----FP-----------ASEKAKMPPDVSLSRLAYLN 682 (1236)
Q Consensus 652 ~~--~~-----------------~-----~~---------~~-----~~-----------~~~~~~~~~~~~~~~~~~~~ 682 (1236)
+. .+ + .. .+ .. ..++++..+.+.+..+++|.
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~ 860 (1490)
T TIGR01271 781 HSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYI 860 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHH
Confidence 00 00 0 00 00 00 00000111233444444433
Q ss_pred CC-ch-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh--c--CchhHH-----------hhhHHHH-HHHHHHHHHHHHH
Q 040099 683 SP-EV-PALLLGAIASMTNGIIIPIFGVMLAAMVNTL--N--EPKEEL-----------MRHSKHW-ALMFVALGAASLL 744 (1236)
Q Consensus 683 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~-----------~~~~~~~-~~~~~~l~~~~~~ 744 (1236)
+. ++ ..+++.+++.++..++.....+++..+.... + ...... ......| ..+|++++++..+
T Consensus 861 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1490)
T TIGR01271 861 TTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLA 940 (1490)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHH
Confidence 32 11 2222212222222222222333332221100 0 000000 0011122 3344444445566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 745 TSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLV 824 (1236)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~i 824 (1236)
+.+++.+++...+.+.+.++|.+++++++++|++|||+ +++|+++|||++|++.++..++..+..++..++.+++.++
T Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~ 1018 (1490)
T TIGR01271 941 LGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIF 1018 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888999999999999999999999999999994 8999999999999999999999999999999999999988
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHH
Q 040099 825 IAFKACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPI 904 (1236)
Q Consensus 825 i~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~ 904 (1236)
++++.+|.+++++++++++++....++.+..+...+......+...+++.|+++|+.|||+|+.++++.+++.+..+...
T Consensus 1019 ~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~ 1098 (1490)
T TIGR01271 1019 VVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHT 1098 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 88888887655443333333333334444434444444455667789999999999999999999999999999988765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 905 KAGIRQGLMSGIGFGLSFFFFFMAY--AVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAA 982 (1236)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 982 (1236)
+..........+......++..+.. ++.++++.. ..+.|.+..++.+......++..+...+.+++..+.+.+
T Consensus 1099 ~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~e 1173 (1490)
T TIGR01271 1099 ANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVS 1173 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544333322222222222111111 111222222 233444444444555566677777788889999999999
Q ss_pred HHHHHHhcccccCCCccc-------------c-C-c-cCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEc
Q 040099 983 SVFGLIDQVSKIDSSEYT-------------G-R-T-LENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVG 1046 (1236)
Q Consensus 983 ri~~~~~~~~~~~~~~~~-------------~-~-~-~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG 1046 (1236)
|+.++.+.+++.+..... . . + ..+..|.|+|+||+|+|++. .+++|+|+||+|+|||+|||||
T Consensus 1174 Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvG 1252 (1490)
T TIGR01271 1174 RVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLG 1252 (1490)
T ss_pred HHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEEC
Confidence 999999766553211100 0 0 0 11346899999999999853 3579999999999999999999
Q ss_pred CCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH--------------HHhh
Q 040099 1047 ESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA--------------EMAN 1112 (1236)
Q Consensus 1047 ~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~--------------~~a~ 1112 (1236)
|||||||||+++|+|+|+ ++|+|+|||+||++++++.+|++|++|||||+||+|||||||+ +.++
T Consensus 1253 rSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~ 1331 (1490)
T TIGR01271 1253 RTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVG 1331 (1490)
T ss_pred CCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCC
Confidence 999999999999999998 7999999999999999999999999999999999999999995 6788
Q ss_pred hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecC
Q 040099 1113 ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHR 1192 (1236)
Q Consensus 1113 ~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHR 1192 (1236)
+++++.++|+||||.|||+|.+|||||||||||||||||+|+|||||||||+||++||+.|++.|++.+++||+|+||||
T Consensus 1332 L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHR 1411 (1490)
T TIGR01271 1332 LKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHR 1411 (1490)
T ss_pred CHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhccC
Q 040099 1193 LSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1193 l~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q~ 1235 (1236)
++++.+||||+||++|+|+|.|+|++|+++ +|.|++|++.++
T Consensus 1412 l~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1412 VEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAAD 1453 (1490)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhC
Confidence 999999999999999999999999999985 899999998653
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.1e-114 Score=1009.94 Aligned_cols=574 Identities=39% Similarity=0.609 Sum_probs=543.0
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQ 124 (1236)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1236)
..++|++.|++|+++ .+..+.++.++.+....+.|++.|+++|.+....+. ...+...+..+.++.++.+++.+++
T Consensus 133 ~~~~rl~~l~~~~~~-~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~---~~~~~~~~~~l~~l~~~~a~~~~~r 208 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWK-WLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDS---ADALKRACTILLGLFLIGALANAIR 208 (716)
T ss_pred hHHHHHHHHhchhHH-HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999999865 457777777888888889999999999987651111 2334456677778888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 125 VACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKG 204 (1236)
Q Consensus 125 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1236)
.+++..+++++..++|.++|+++++++++|||.+ ++|||+||+++|+..+.+.++..+...+.++++.++++++||++|
T Consensus 209 ~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S 287 (716)
T KOG0058|consen 209 GGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLS 287 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 040099 205 WLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQE 284 (1236)
Q Consensus 205 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 284 (1236)
|+|++++++.+|+++++..+++++.++.+++.|++.++.+...+|.+++|||||+|+.|+.|.+||.+..++..+...|.
T Consensus 288 ~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~ 367 (716)
T KOG0058|consen 288 WRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKE 367 (716)
T ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 040099 285 GLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINR 364 (1236)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 364 (1236)
....+.+.....+..++..+.+++||++++.+|.||.|++++|++|......++..++..++.++++..|.+|+||++|+
T Consensus 368 a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr 447 (716)
T KOG0058|consen 368 AVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDR 447 (716)
T ss_pred HHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 040099 365 KPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEV 444 (1236)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 444 (1236)
+|.++... ...+...+|.|+|+||+|+||.+++.+||+|+||+|+|||+||+|||||+||||+++||.|||+|++|+|
T Consensus 448 ~P~i~~~G--~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I 525 (716)
T KOG0058|consen 448 KPRIPLTG--TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI 525 (716)
T ss_pred CCCCCCCC--ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 99876542 1222257899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCC
Q 040099 445 LIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQL 524 (1236)
Q Consensus 445 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 524 (1236)
.+||+||+++++.+||++||+|.|||.||++||+|||+||.+++++|++..|+++|++|+||.++|+||||.|||+|.+|
T Consensus 526 llDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qL 605 (716)
T KOG0058|consen 526 LLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQL 605 (716)
T ss_pred EECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeC
Q 040099 525 SGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 525 SgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~ 604 (1236)
||||||||||||||++||.||||||||||||+++|..|+++|.+..+++|||+|+|||+|+++||+|+|+++|+++|.|+
T Consensus 606 SGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 606 SGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred cchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhhhHHhhhh
Q 040099 605 HSELLENPYGAYNRLIRLQET 625 (1236)
Q Consensus 605 ~~~l~~~~~~~y~~~~~~~~~ 625 (1236)
|+||+++++|.|+++.+.|..
T Consensus 686 h~eLl~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 686 HDELLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred HHHHhhCcccHHHHHHHHhcc
Confidence 999999977999999988754
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-108 Score=965.26 Aligned_cols=558 Identities=38% Similarity=0.596 Sum_probs=528.5
Q ss_pred chhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 673 VSLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYC 752 (1236)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 752 (1236)
..+++++.+.+++|+++..+..+.++......+.|.+.+.+++.++.. .+...........+.++.++..++.+++.++
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~-~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEG-DDSADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999999999998888888888889999999887661 2223334445666677788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 753 FAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQ 832 (1236)
Q Consensus 753 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~ 832 (1236)
+.++++++..++|..+|+++++++++|||. |.+|++++|++.|+..+.+.++..+...+.+++..++++.++++.+|.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~ 289 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWR 289 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHH
Confidence 999999999999999999999999999994 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHH
Q 040099 833 LALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGL 912 (1236)
Q Consensus 833 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1236)
++++.++.+|++.+...++.+++++.+++.+++.+++++...|.+++++|||+|+.|+++.++|.+..++..+...|...
T Consensus 290 Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 290 LTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 040099 913 MSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVS 992 (1236)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 992 (1236)
..+.+++...+...+....++++|++++..|.++.|++..++++......++..++.++.++.++..|.+|+++++|++|
T Consensus 370 a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEE
Q 040099 993 KIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITL 1072 (1236)
Q Consensus 993 ~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~i 1072 (1236)
..+.. .... |....|.|+|+||+|+||.||+.+||+|+||+|+|||+||+||||||||||+++||+|||+|++|+|++
T Consensus 450 ~i~~~-G~~~-p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Ill 527 (716)
T KOG0058|consen 450 RIPLT-GTLA-PDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILL 527 (716)
T ss_pred CCCCC-Cccc-cccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 88765 2112 225789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCCh
Q 040099 1073 DGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSG 1137 (1236)
Q Consensus 1073 dG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSG 1137 (1236)
||+||+++++++||++||+|.|||.||++||+|||. ++||+|+||..+|+||||.|||+|.+|||
T Consensus 528 DG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 528 DGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 999999999999999999999999999999999994 88999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChh
Q 040099 1138 GQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHE 1217 (1236)
Q Consensus 1138 GQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~ 1217 (1236)
||||||||||||+|||+||||||||||||+++|..||++|++..+++|||+|||||+||++||+|+|+++|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCcccHHhhhccC
Q 040099 1218 SLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1218 eLl~~~~g~y~~L~~~q~ 1235 (1236)
||+++++|.|++|+++|.
T Consensus 688 eLl~~~~gly~~Lv~~q~ 705 (716)
T KOG0058|consen 688 ELLSKPNGLYAKLVQRQL 705 (716)
T ss_pred HHhhCcccHHHHHHHHhc
Confidence 999998899999998873
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.6e-105 Score=982.62 Aligned_cols=579 Identities=43% Similarity=0.727 Sum_probs=546.2
Q ss_pred ccchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHH
Q 040099 43 GRIPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASF 122 (1236)
Q Consensus 43 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1236)
.+.++++++++.+|. |.+++++++++++.|...|++.++++.++..+... +.+........+++++++++++.+++.+
T Consensus 648 ~~~s~~~i~k~~~pe-~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~-~~~~~~~~~~~~al~f~~l~~~~~i~~~ 725 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKPE-WPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPP-DDDELKREVRAWALIFLGLGIVSGITNF 725 (1228)
T ss_pred ccccHHHHHHhccch-hHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999996 56789999999999999999999999999987643 2222222223378888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 123 FQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFF 202 (1236)
Q Consensus 123 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1236)
++.+++...|+++..|+|...|+++++++++|||+..++|.|.+|+.+|...++..+.+-+..++.++..+++++++.|+
T Consensus 726 ~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~ 805 (1228)
T KOG0055|consen 726 LQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFI 805 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997656699999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 040099 203 KGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSV 282 (1236)
Q Consensus 203 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 282 (1236)
++|+|+++++++.|++++..+...+.+.....+..+..++.+..+.|++.+||||++|+.|+++.+.|.+..++..+...
T Consensus 806 ~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~ 885 (1228)
T KOG0055|consen 806 YGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSF 885 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 283 QEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAI 362 (1236)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 362 (1236)
|...+.++..++.+.+.++.+++.+|||++++.+|.+++.+++-.+..+.+....+++.....+.+.+|+.|+.++|+++
T Consensus 886 ~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~ 965 (1228)
T KOG0055|consen 886 KRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEIL 965 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988888888889999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCc
Q 040099 363 NRKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAG 442 (1236)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 442 (1236)
|++|+++..+..+...+..+|+|+|+||+|+||.+|+.+||+|+||+|++|+++||||||||||||++.||.|||+|++|
T Consensus 966 dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G 1045 (1228)
T KOG0055|consen 966 DRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAG 1045 (1228)
T ss_pred cCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 99997765432333456678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCC
Q 040099 443 EVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGI 522 (1236)
Q Consensus 443 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~ 522 (1236)
.|.|||+|++++++++||++||.|.|||.||++||||||+||.+.++++|+.+||+.|++|+||.+||+||||.+||+|.
T Consensus 1046 ~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~ 1125 (1228)
T KOG0055|consen 1046 KVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGV 1125 (1228)
T ss_pred eEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccC
Confidence 99999999999999999999999999999999999999999966689999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEE
Q 040099 523 QLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEK 602 (1236)
Q Consensus 523 ~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~ 602 (1236)
+||||||||||||||++|||+||||||+|||||.++|+.++++|++.+.|||+|+|||||+|+++||.|+|++||+|+|+
T Consensus 1126 QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~ 1205 (1228)
T KOG0055|consen 1126 QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQ 1205 (1228)
T ss_pred cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcccccccccchhhhhHHhhh
Q 040099 603 GTHSELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 603 g~~~~l~~~~~~~y~~~~~~~~ 624 (1236)
|+|++|+++ +|.|.+|++.|.
T Consensus 1206 GtH~~L~~~-~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1206 GTHDELLAK-RGIYFRLVQLQS 1226 (1228)
T ss_pred ccHHHHHhC-CCchHHHhhhcc
Confidence 999999996 899999998764
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.4e-97 Score=908.43 Aligned_cols=570 Identities=31% Similarity=0.455 Sum_probs=527.8
Q ss_pred cchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 44 RIPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFF 123 (1236)
Q Consensus 44 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1236)
+..+.+++..+.+|++.+ .-.++.+++..++....|++++.++|.+....+. +.+....+.+++.++...++.++
T Consensus 139 ~~~~~~f~~~~~~~~~~l-~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~----~tL~vl~ig~~~~~l~~~~l~~l 213 (709)
T COG2274 139 PFGLSWFIPLLFKYRRLL-FEVLLASLLLQLLALATPLFSQIVIDKVLPDASR----STLTVLAIGLLLAALFEALLRLL 213 (709)
T ss_pred ccchHhHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCch----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 446777888787776543 3334444555555566667889999997654332 44555566667777888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 124 QVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFK 203 (1236)
Q Consensus 124 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1236)
+.++..+++.++..++-.++|+|++++|++||+++ ++||+++|+. |.++|+++++..+...+.+++++++.+++|+++
T Consensus 214 r~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~y 291 (709)
T COG2274 214 RTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLY 291 (709)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 9999999996 999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 040099 204 GWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQ 283 (1236)
Q Consensus 204 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 283 (1236)
+|.|++++++.+|+++++..++.+.+++..++..+..++.++.+.|+++|+++||+.+.|.++..+|++...+..+.+.+
T Consensus 292 s~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~ 371 (709)
T COG2274 292 SWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFK 371 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 284 EGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAIN 363 (1236)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 363 (1236)
..+.......+..++..++.++++|+|+++|++|++|+|++++|.+....+..|+.++...+..+++++.+.+|+.++++
T Consensus 372 ~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~ 451 (709)
T COG2274 372 TEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILD 451 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 040099 364 RKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGE 443 (1236)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 443 (1236)
.|+|.+... .....+...|+|+|+||+|+|+.+ ++++|+|+||+|+|||++||||+||||||||+|+|+|+|+|++|+
T Consensus 452 ~~~E~~~~~-~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~ 529 (709)
T COG2274 452 TPPEQEGDK-TLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGR 529 (709)
T ss_pred CCccccccc-ccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 988855432 123456678999999999999854 347999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 444 VLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 444 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
|++||.|+.++++.++|++||||+||+.||+|||+|||++++|++++|++.+||+.+++|+||.++|.||+|.+||+|.+
T Consensus 530 I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~ 609 (709)
T COG2274 530 ILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGAN 609 (709)
T ss_pred EEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEe
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g 603 (1236)
|||||||||+|||||++||+||||||||||||+++|+.|.+.|.++..++|+|+||||++++++||||+||++|+|+++|
T Consensus 610 LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~g 689 (709)
T COG2274 610 LSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQG 689 (709)
T ss_pred CCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccchhhhhHHhh
Q 040099 604 THSELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 604 ~~~~l~~~~~~~y~~~~~~~ 623 (1236)
+|+||++. +|.|+++|..|
T Consensus 690 s~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 690 SHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred CHHHHHHh-cChHHHHHhcc
Confidence 99999998 89999999765
No 13
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.2e-91 Score=872.38 Aligned_cols=568 Identities=21% Similarity=0.252 Sum_probs=498.9
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQN-ATKTLAIHGVLKVSKKFVYLALGAGVASFF 123 (1236)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1236)
..++++++|.+|+++ .++++++++++.+++.+..|+++++++|.+... .+. ..+..+...++++.++..++.++
T Consensus 8 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 82 (588)
T PRK11174 8 ELTRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPR----EALLPPFILLILLFVLRALLAWL 82 (588)
T ss_pred hhhHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 347789999999866 456777777888888888999999999976421 111 12223333445556667788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 124 QVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFK 203 (1236)
Q Consensus 124 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1236)
+.++..+.+.++..++|.++|+|++++|+++|+++ ++|++++|+++|++.+++++...+..++..++.+++.+++++++
T Consensus 83 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 161 (588)
T PRK11174 83 RERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPI 161 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 040099 204 GWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQ 283 (1236)
Q Consensus 204 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 283 (1236)
+|.+++++++++|+++++..++.++.++..++.++..+++++.+.|.++|+++||+|++|+.+.++|++..++..+...+
T Consensus 162 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 241 (588)
T PRK11174 162 NWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTME 241 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 284 EGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDV---------MSVIFGVLIGSMSLGQASPCLSAFAAGQAA 354 (1236)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s 354 (1236)
..+..+...++..++..+..+++++++++.+. |.+|+|++ ++++.+......|+..++..+..++++.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~ 320 (588)
T PRK11174 242 VLRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGA 320 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777777776666666666666666544 88888865 111233445578999999999999999999
Q ss_pred HHHHHHHhccCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHH
Q 040099 355 AFKFFEAINRKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQ 434 (1236)
Q Consensus 355 ~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~ 434 (1236)
++|+.++++.+++.+... ....+....++|+|+||+|.|++ ++++|+|+||+|+|||++|||||||||||||+++|+
T Consensus 321 ~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~ 397 (588)
T PRK11174 321 AESLVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALL 397 (588)
T ss_pred HHHHHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 999999998765432111 10111112357999999988763 357999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCcc
Q 040099 435 RFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLD 514 (1236)
Q Consensus 435 ~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~ 514 (1236)
|+| |++|+|++||+|+++++.+++|++|+||||||+||++||+|||++|+|++++++++++++.|++++|+.++|+|||
T Consensus 398 g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~d 476 (588)
T PRK11174 398 GFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLD 476 (588)
T ss_pred cCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccc
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEE
Q 040099 515 TNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVI 594 (1236)
Q Consensus 515 t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl 594 (1236)
|.+||+|.+|||||||||+||||+++||+|||||||||+||+++|+.|+++|+++.+++|+|+||||++++++||+|++|
T Consensus 477 T~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl 556 (588)
T PRK11174 477 TPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVM 556 (588)
T ss_pred cccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred ECCEEEEEeCcccccccccchhhhhHHhhh
Q 040099 595 QQGKIVEKGTHSELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 595 ~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~ 624 (1236)
++|+|+|+|+|+||+++ ++.|++++..|.
T Consensus 557 ~~G~i~e~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 557 QDGQIVQQGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred eCCeEeecCCHHHHHhc-chHHHHHHHHhh
Confidence 99999999999999988 789999997764
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=8.8e-90 Score=855.44 Aligned_cols=562 Identities=34% Similarity=0.540 Sum_probs=513.4
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 47 FHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVA 126 (1236)
Q Consensus 47 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1236)
+++++.+.+ .+ .+.++.++.++..++....|++++.++|.+... . .....+..+++++.++..++.++..+
T Consensus 4 ~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~----~~~~~~~~~~~~~~~~~~v~~~~~~~ 74 (567)
T COG1132 4 LRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD--L----GELLELLLLLLLLALLGGVLRALQSY 74 (567)
T ss_pred HHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--H----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666665 34 556677777777788888888999999986511 1 22333344455555567788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 127 CWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWL 206 (1236)
Q Consensus 127 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1236)
+..+.+.++..++|.++|++++++|+++|+++ ++|++++|+++|++.++..+.+....+...++++++.+++++..+|.
T Consensus 75 ~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (567)
T COG1132 75 LGSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWR 153 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88999999999999999999999999999999 99999999999999999999998666666789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 207 LTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGL 286 (1236)
Q Consensus 207 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 286 (1236)
+++++++..|++.+...++.++.++..++.++..+++++.+.|.++|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 154 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (567)
T COG1132 154 LALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASR 233 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 040099 287 ATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKP 366 (1236)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 366 (1236)
..+...++..++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..++++.+|++|++++++.+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 313 (567)
T COG1132 234 LEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEP 313 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 040099 367 EIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLI 446 (1236)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 446 (1236)
+..+... ......++|+|+||+|+|++ ++++|+|+||+++|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 314 ~~~~~~~---~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 314 EVEDPPD---PLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred cccCCCC---CCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 6543221 12334577999999999974 457999999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 447 DGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 447 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
||+|+++++.+++|++|+||||||+||++||+|||.+|+|++++||+++||+.++++||+.++|+||||.+||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcc
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~ 606 (1236)
|||||||||||+++||||||||||||+||++||+.|+++++++.++||+|+||||++++++||+|+||++|+|+|.|+|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~ 548 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHE 548 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHH
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred cccccccchhhhhHHhhh
Q 040099 607 ELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 607 ~l~~~~~~~y~~~~~~~~ 624 (1236)
||+++ +|.|+++|..|.
T Consensus 549 eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 549 ELLAK-GGLYARLYQAQG 565 (567)
T ss_pred HHHHc-CCHHHHHHHHhh
Confidence 99998 899999998764
No 15
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.4e-90 Score=848.35 Aligned_cols=554 Identities=31% Similarity=0.460 Sum_probs=502.2
Q ss_pred hhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 674 SLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCF 753 (1236)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 753 (1236)
.+.+++....++++.+.-.++.+++..+.....+++...++|...... ...........++++++...++..++.+.+
T Consensus 141 ~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~--~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~ 218 (709)
T COG2274 141 GLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDA--SRSTLTVLAIGLLLAALFEALLRLLRTYLI 218 (709)
T ss_pred chHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555655555555555555555555555666666543321 122233445566677788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 040099 754 AVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQL 833 (1236)
Q Consensus 754 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l 833 (1236)
.+.+.|+..++-.++|+|++++|++||. .+++|++++|+ +|.+.++++++......+..+...++.++++++++|.+
T Consensus 219 ~~~~~rld~~l~~~~~~hll~Lpl~~f~--~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L 295 (709)
T COG2274 219 AHLGKRLDLELSGRFFRHLLRLPLSYFE--KRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKL 295 (709)
T ss_pred HHHHHHHhHHHHHHHHHHHHcCcHHHcc--CCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 48899999999 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040099 834 ALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLM 913 (1236)
Q Consensus 834 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1236)
++++++.+|++++...+..+.+++..++.....++.++++.|++.|++|||+.+.|.++..+|++...+..+...+....
T Consensus 296 ~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~ 375 (709)
T COG2274 296 TLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKL 375 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 040099 914 SGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSK 993 (1236)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 993 (1236)
......+..++..+..++++|+|+++|.+|++|+|.++++.+....+..|+..+..++.+++....+.+|+.++++.++|
T Consensus 376 ~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E 455 (709)
T COG2274 376 ALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPE 455 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEEC
Q 040099 994 IDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLD 1073 (1236)
Q Consensus 994 ~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~id 1073 (1236)
.+.+.. ....+...|+|+|+||+|+|+.++ +++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++|
T Consensus 456 ~~~~~~-~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~d 533 (709)
T COG2274 456 QEGDKT-LIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLD 533 (709)
T ss_pred cccccc-cccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 554332 123456789999999999998663 479999999999999999999999999999999999999999999999
Q ss_pred CeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChh
Q 040099 1074 GVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGG 1138 (1236)
Q Consensus 1074 G~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGG 1138 (1236)
|+|++++++..||++|+|||||++||+|||||||+ +.|++|+||.++|.||||+|||+|.+||||
T Consensus 534 g~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGG 613 (709)
T COG2274 534 GVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGG 613 (709)
T ss_pred CEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHH
Confidence 99999999999999999999999999999999995 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhH
Q 040099 1139 QKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHES 1218 (1236)
Q Consensus 1139 QrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~e 1218 (1236)
|||||+|||||++||+||||||||||||++||+.|.+.|.+..++||+|+||||++++++||||+|||+|+|+|+|+|+|
T Consensus 614 QrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~e 693 (709)
T COG2274 614 QRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEE 693 (709)
T ss_pred HHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCcccHHhhhccC
Q 040099 1219 LISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1219 Ll~~~~g~y~~L~~~q~ 1235 (1236)
|++. +|.|+++++.|.
T Consensus 694 ll~~-~g~y~~l~~~q~ 709 (709)
T COG2274 694 LLAQ-GGLYARLYQQQE 709 (709)
T ss_pred HHHh-cChHHHHHhccC
Confidence 9997 999999998774
No 16
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7e-90 Score=915.91 Aligned_cols=570 Identities=29% Similarity=0.439 Sum_probs=498.7
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 46 PFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQV 125 (1236)
Q Consensus 46 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (1236)
.+.+++++++++++. ++++++++++.+++.|++|++++.++|.+..... .......+++++++++++.+++.+++.
T Consensus 812 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~l~~~~~~i~~~~~~~l~~ 887 (1466)
T PTZ00265 812 NLRIVYREIFSYKKD-VTIIALSILVAGGLYPVFALLYAKYVSTLFDFAN---LEANSNKYSLYILVIAIAMFISETLKN 887 (1466)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777654 5777778889999999999999999997643211 112233456667777788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhc--cCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 126 ACWMITGERQAARIRSFYLETILRQDIAFFDK--EINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFK 203 (1236)
Q Consensus 126 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~--~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1236)
++..++++++..++|.++|+|++++|++||++ + ++|++++|+++|++.++.++...+..++..++++++++++++++
T Consensus 888 ~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~-~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~ 966 (1466)
T PTZ00265 888 YYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKH-APGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYF 966 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999986 6 89999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhhHHHHHHhchHHH
Q 040099 204 GWLLTLTMLSSIPPLVIAGVVMIKLVGNLA-SQ-----------------KQAADSLAATVVAQTIGSIRTVASFTGEQQ 265 (1236)
Q Consensus 204 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 265 (1236)
+|.+++++++++ +++...+.++.+... ++ .++..++.+..++|.++|+++||+|+.|+.
T Consensus 967 ~~~l~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 1043 (1466)
T PTZ00265 967 CPIVAAVLTGTY---FIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDY 1043 (1466)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHH
Confidence 999988765443 333444444433221 11 234467789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 266 ASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCL 345 (1236)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~ 345 (1236)
+.++|.+..++..+...+.....++..++..++..+..++++|+|++++.+|.+|+|++++++.+++....++..+...+
T Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~ 1123 (1466)
T PTZ00265 1044 FCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLK 1123 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888899999999998889999999999999999999999999998877766667788888999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCccccccCCCC---CCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCC
Q 040099 346 SAFAAGQAAAFKFFEAINRKPEIDLCCVNGKK---LDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTS 422 (1236)
Q Consensus 346 ~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~s 422 (1236)
..++++++|++|++++++.+++++..+..+.. ++...+.|+|+||+|+||++++.++|+|+||+|+||+++||||||
T Consensus 1124 ~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~S 1203 (1466)
T PTZ00265 1124 GDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGET 1203 (1466)
T ss_pred HHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCC
Confidence 99999999999999999987654321111111 123457899999999998665568999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCCC------------------------------------------------------CCcEEEECC
Q 040099 423 GSGKSTVISLIQRFYDP------------------------------------------------------QAGEVLIDG 448 (1236)
Q Consensus 423 GsGKSTl~~ll~~~~~~------------------------------------------------------~~G~i~~~g 448 (1236)
|||||||+++|+|+|+| ++|+|++||
T Consensus 1204 GsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG 1283 (1466)
T PTZ00265 1204 GSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDG 1283 (1466)
T ss_pred CCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECC
Confidence 99999999999999999 699999999
Q ss_pred eecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 449 VNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 449 ~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
+|+++++.+++|++||||+|+|+||++||+|||+||+|+++++++++||+.+++++||.+||+||||.|||+|.+|||||
T Consensus 1284 ~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQ 1363 (1466)
T PTZ00265 1284 VDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQ 1363 (1466)
T ss_pred EEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhhcCeEEEEEC----CEEE-E
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRNANIIAVIQQ----GKIV-E 601 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~ad~i~vl~~----G~i~-~ 601 (1236)
||||||||||+++|+|||||||||+||+++|+.|+++|.++. +++|+|+||||++++++||+|+||++ |+++ |
T Consensus 1364 kQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e 1443 (1466)
T PTZ00265 1364 KQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQA 1443 (1466)
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEE
Confidence 999999999999999999999999999999999999999984 68999999999999999999999999 9955 8
Q ss_pred EeCcccccccccchhhhhHHhh
Q 040099 602 KGTHSELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 602 ~g~~~~l~~~~~~~y~~~~~~~ 623 (1236)
+|+|+||+++.+|.|+++++.|
T Consensus 1444 ~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1444 HGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred ecCHHHHHhcCCChHHHHHhhc
Confidence 9999999974379999998765
No 17
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=8.8e-89 Score=862.68 Aligned_cols=565 Identities=35% Similarity=0.527 Sum_probs=508.5
Q ss_pred cchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 44 RIPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFF 123 (1236)
Q Consensus 44 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1236)
...+++++++.+++++ .++.++++.++.+++....|+++++++|.+....+. ..+......++++.++..++.++
T Consensus 146 ~~~~~~l~~~~~~~~~-~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 220 (711)
T TIGR00958 146 ADLLFRLLGLSGRDWP-WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP----PALASAIFFMCLLSIASSVSAGL 220 (711)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999887755 456677777778888888899999999987543222 11222233344455667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 124 QVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFK 203 (1236)
Q Consensus 124 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1236)
+.++..+.+.++..++|.++|++++++|++||++. ++|++++|+++|++.+++.+...+..++.+++.+++++++++++
T Consensus 221 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~ 299 (711)
T TIGR00958 221 RGGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWL 299 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 040099 204 GWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQ 283 (1236)
Q Consensus 204 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 283 (1236)
+|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+
T Consensus 300 s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~ 379 (711)
T TIGR00958 300 SPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKR 379 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 284 EGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAIN 363 (1236)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 363 (1236)
.....+....+..++..+..++++++|++++.+|.+|+|++++++.+......|+..+...+..++++.++.+|++++++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~ 459 (711)
T TIGR00958 380 KALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLD 459 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87777776666677777778888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 040099 364 RKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGE 443 (1236)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 443 (1236)
.+++.+... ...+.+..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 460 ~~~~~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~ 537 (711)
T TIGR00958 460 RKPNIPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQ 537 (711)
T ss_pred CCCCCCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCE
Confidence 876643221 112223456899999999998655568999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 444 VLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 444 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
|++||+|+++++.+++|++|+||+|||++|++||+|||.+|.++.++++++++++.+++++|++++|+||||.+||+|.+
T Consensus 538 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~ 617 (711)
T TIGR00958 538 VLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQ 617 (711)
T ss_pred EEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCc
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEe
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g 603 (1236)
|||||||||+||||++++|+|||||||||+||+++|+.+++ . ...+++|+|+||||+++++.||+|++|++|+|+|+|
T Consensus 618 LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~-~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~G 695 (711)
T TIGR00958 618 LSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-S-RSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMG 695 (711)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-h-hccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEee
Confidence 99999999999999999999999999999999999999998 3 334689999999999999999999999999999999
Q ss_pred Ccccccccccchhhhh
Q 040099 604 THSELLENPYGAYNRL 619 (1236)
Q Consensus 604 ~~~~l~~~~~~~y~~~ 619 (1236)
+|+||+++ ++.|+++
T Consensus 696 t~~eL~~~-~~~y~~l 710 (711)
T TIGR00958 696 THKQLMED-QGCYKHL 710 (711)
T ss_pred CHHHHHhC-CCchHhc
Confidence 99999987 6888875
No 18
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.5e-87 Score=852.72 Aligned_cols=564 Identities=27% Similarity=0.341 Sum_probs=507.9
Q ss_pred chHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSF-ADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFF 123 (1236)
Q Consensus 45 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1236)
..+++++++ ++++++ .++..++++++..++....|++++.++|.+....+. ..+...++.++++.++..++.++
T Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~ 195 (686)
T TIGR03797 121 LGLRDLLRFALRGARR-DLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADR----SLLVQIALALLAAAVGAAAFQLA 195 (686)
T ss_pred ccHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCh----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 446677766 455544 345556666777777777888999999987643221 22333344455556667788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 124 QVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFK 203 (1236)
Q Consensus 124 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1236)
+.++..+++.++..++|.++|+|++++|++||+++ ++|++++|++ |++.+++++...+...+.+.+.+++.+++++++
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (686)
T TIGR03797 196 QSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYY 273 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 9999999997 899999999998888888888888899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 040099 204 GWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQ 283 (1236)
Q Consensus 204 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 283 (1236)
+|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+
T Consensus 274 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 353 (686)
T TIGR03797 274 SWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELS 353 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 284 EGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAIN 363 (1236)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 363 (1236)
..+...+...+..++..+..++++|+|++++.+|.+|+|+++++..+...+..|+.++...+..++++..+.+|+.++++
T Consensus 354 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 433 (686)
T TIGR03797 354 AQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILE 433 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988888888888888889999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcE
Q 040099 364 RKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGE 443 (1236)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 443 (1236)
.+++.+... ..+....+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+|+|+|+|+|++|+
T Consensus 434 ~~~e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 509 (686)
T TIGR03797 434 ALPEVDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGS 509 (686)
T ss_pred CCcccccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCE
Confidence 766543211 1122345689999999999743 467999999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 444 VLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 444 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
|++||+|+++++.+++|++||||||||++|++||+|||.+++| +++++++++++.+++++++.++|+||||.+||+|.+
T Consensus 510 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~ 588 (686)
T TIGR03797 510 VFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGT 588 (686)
T ss_pred EEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCC
Confidence 9999999999999999999999999999999999999999998 899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEe
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g 603 (1236)
|||||||||+||||++++|+|||||||||+||+++|+.+.+.|+++ ++|+|+||||+++++.||+|+||++|+|+++|
T Consensus 589 LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G 666 (686)
T TIGR03797 589 LSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQG 666 (686)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999999999999886 68999999999999999999999999999999
Q ss_pred CcccccccccchhhhhHHhh
Q 040099 604 THSELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 604 ~~~~l~~~~~~~y~~~~~~~ 623 (1236)
+|+||+++ ++.|+++++.|
T Consensus 667 ~~~~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 667 TYDELMAR-EGLFAQLARRQ 685 (686)
T ss_pred CHHHHHhC-CcHHHHHHHhc
Confidence 99999987 79999998754
No 19
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.5e-87 Score=831.41 Aligned_cols=567 Identities=22% Similarity=0.313 Sum_probs=500.6
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 47 FHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVA 126 (1236)
Q Consensus 47 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1236)
++++++|.+++++ .++++++++++..++....|++++.++|.....................+++++++..++.++..+
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (574)
T PRK11160 4 LLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERL 82 (574)
T ss_pred hHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 5567788888765 345667777777777777888999999974311110000000111122344455677888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 127 CWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWL 206 (1236)
Q Consensus 127 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1236)
+..+.+.++..++|.++|+|++++|+.+|++. ++|++++|+++|++.+++++.+.++.++..+++++++++++++++|+
T Consensus 83 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (574)
T PRK11160 83 VSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLT 161 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 207 LTLTMLSSIPPLVI-AGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEG 285 (1236)
Q Consensus 207 l~l~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 285 (1236)
+++++++++|++++ +..++.++.++..++.++..+++++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 162 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 241 (574)
T PRK11160 162 LALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQA 241 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887665 45777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 040099 286 LATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLI-GSMSLGQASPCLSAFAAGQAAAFKFFEAINR 364 (1236)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 364 (1236)
+..+...++..++..+..++++++|+++ .+|.+++|.+++++.+... ...|+..+...+..++++.++++|+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~ 320 (574)
T PRK11160 242 NLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQ 320 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999888888888888888899999998 4899999999998877644 3568888888899999999999999999998
Q ss_pred CCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 040099 365 KPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEV 444 (1236)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 444 (1236)
+++.+... . .......+.|+|+||+|+|+++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 321 ~~~~~~~~-~-~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I 397 (574)
T PRK11160 321 KPEVTFPT-T-STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEI 397 (574)
T ss_pred CCCCCCCc-c-cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 76543221 1 1112234679999999999743 3579999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCC
Q 040099 445 LIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQL 524 (1236)
Q Consensus 445 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 524 (1236)
++||+|+++++.+++|++|+||+|||++|++||+|||++++|++++++++++++.+++++|+.+ |+||||.+||+|.+|
T Consensus 398 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~L 476 (574)
T PRK11160 398 LLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQL 476 (574)
T ss_pred EECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeC
Q 040099 525 SGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 525 SgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~ 604 (1236)
||||||||+||||++++|+|||||||||+||+++|+.+.+.|.++.+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 477 SgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~ 556 (574)
T PRK11160 477 SGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGT 556 (574)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCC
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred cccccccccchhhhhHH
Q 040099 605 HSELLENPYGAYNRLIR 621 (1236)
Q Consensus 605 ~~~l~~~~~~~y~~~~~ 621 (1236)
|+||+++ +|.|+++|+
T Consensus 557 ~~~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 557 HQELLAQ-QGRYYQLKQ 572 (574)
T ss_pred HHHHHhc-CcHHHHHHh
Confidence 9999988 799999885
No 20
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.2e-87 Score=854.12 Aligned_cols=565 Identities=26% Similarity=0.370 Sum_probs=507.9
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQ 124 (1236)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1236)
..+++++++++++++. ++..++++++..++....|++++.++|.+...... ..+..+...++++.++..++.+++
T Consensus 142 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~ 216 (708)
T TIGR01193 142 NSLLKFIPLITRQKKL-IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMM----GTLGIISIGLIIAYIIQQILSYIQ 216 (708)
T ss_pred chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888888887654 34555566666677777888999999987543221 223333344445556677888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 125 VACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKG 204 (1236)
Q Consensus 125 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1236)
.++..+.+.++..++|.++|+|++++|+.||+++ ++|++++|++ |++.+++++...+...+.+++++++.++++++++
T Consensus 217 ~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 294 (708)
T TIGR01193 217 IFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQN 294 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998 9999999998 9999999999888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 040099 205 WLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQE 284 (1236)
Q Consensus 205 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 284 (1236)
|.+++++++.+|+++++..++.++.++..++.++..++.++.+.|+++|+++||+||.|+.+.++|++...+..+...+.
T Consensus 295 ~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 374 (708)
T TIGR01193 295 MLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKY 374 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 040099 285 GLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINR 364 (1236)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 364 (1236)
....+....+..++..+..++++|+|++++.+|.+|+|+++++..+...+..|+.++...+..++++.++.+|+.++++.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 375 QKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888777777778888888899999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 040099 365 KPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEV 444 (1236)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 444 (1236)
+++.+... .....+...+.|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 455 ~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I 531 (708)
T TIGR01193 455 DSEFINKK-KRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEI 531 (708)
T ss_pred CCcccccc-cccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEE
Confidence 76543221 10112334578999999999973 3579999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcC-CCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 445 LIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYG-KTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 445 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
++||+|+++++.+++|++||||||||+||++||+|||.++ ++++++++++++++.+++++++.++|+||||.+||+|.+
T Consensus 532 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~ 611 (708)
T TIGR01193 532 LLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSS 611 (708)
T ss_pred EECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCC
Confidence 9999999999999999999999999999999999999999 578899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEe
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g 603 (1236)
|||||||||+||||++++|+|||||||||+||+++|+.+.+.|+++ +++|+|+||||+++++.||+|++|++|+++++|
T Consensus 612 LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G 690 (708)
T TIGR01193 612 ISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQG 690 (708)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999999999999885 689999999999999999999999999999999
Q ss_pred CcccccccccchhhhhHH
Q 040099 604 THSELLENPYGAYNRLIR 621 (1236)
Q Consensus 604 ~~~~l~~~~~~~y~~~~~ 621 (1236)
+|+||+++ +|.|+++++
T Consensus 691 ~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 691 SHDELLDR-NGFYASLIH 707 (708)
T ss_pred CHHHHHhc-CCcHHHHhh
Confidence 99999987 789998874
No 21
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1e-86 Score=849.12 Aligned_cols=565 Identities=24% Similarity=0.302 Sum_probs=506.3
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQ 124 (1236)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1236)
..++.++++++++++. +...++++++..++....|++++.++|.+....+. ..+..+...++++.++.+++.+++
T Consensus 140 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~ 214 (710)
T TIGR03796 140 SLLRALWRRLRGSRGA-LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ----DWLRPLLLGMGLTALLQGVLTWLQ 214 (710)
T ss_pred ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888777553 34455555666666667788899999986543221 112233344445556677888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 125 VACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKG 204 (1236)
Q Consensus 125 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1236)
.++...++.++..++|.++|+|++++|+++|+++ ++|++++|+++| +.+++++...+..++.+++++++.++++++++
T Consensus 215 ~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 292 (710)
T TIGR03796 215 LYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYD 292 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999988 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 040099 205 WLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQE 284 (1236)
Q Consensus 205 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 284 (1236)
|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||++++|+.+.++|.+...+..+...+.
T Consensus 293 ~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 372 (710)
T TIGR03796 293 PVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQEL 372 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 040099 285 GLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINR 364 (1236)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 364 (1236)
.+..++...+..++..+..++++++|++++.+|.+|+|+++++..+...+..|+.++...+..++++..+.+|+.++++.
T Consensus 373 ~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~ 452 (710)
T TIGR03796 373 GVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRN 452 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888888888888899999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCcccccc---C-CCCC-CCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC
Q 040099 365 KPEIDLCCV---N-GKKL-DDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP 439 (1236)
Q Consensus 365 ~~~~~~~~~---~-~~~~-~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 439 (1236)
+++.+.... . .... +...+.|+++||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|
T Consensus 453 ~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 531 (710)
T TIGR03796 453 PVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP 531 (710)
T ss_pred CCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 765432110 0 0111 2335689999999999853 35799999999999999999999999999999999999999
Q ss_pred CCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccC
Q 040099 440 QAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGE 519 (1236)
Q Consensus 440 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~ 519 (1236)
++|+|++||+|+++++.+++|++|+||||+|++|++||+|||.+++|++++++++++++.+++++++.++|+||||.+||
T Consensus 532 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e 611 (710)
T TIGR03796 532 WSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAE 611 (710)
T ss_pred CCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceecc
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEE
Q 040099 520 HGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKI 599 (1236)
Q Consensus 520 ~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i 599 (1236)
+|.+|||||||||+||||++++|+|||||||||+||+++|+.+.+.|++ .++|+|+||||+++++.||+|++|++|+|
T Consensus 612 ~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i 689 (710)
T TIGR03796 612 GGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKV 689 (710)
T ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999999987 58999999999999999999999999999
Q ss_pred EEEeCcccccccccchhhhhH
Q 040099 600 VEKGTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 600 ~~~g~~~~l~~~~~~~y~~~~ 620 (1236)
+++|+|+||+++ ++.|++++
T Consensus 690 ~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 690 VQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred EEecCHHHHHHc-CCcHHHHh
Confidence 999999999987 78999876
No 22
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.9e-86 Score=842.03 Aligned_cols=557 Identities=25% Similarity=0.358 Sum_probs=501.8
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQ 124 (1236)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1236)
..+++++++++++++. +...++++++..++....|++++.++|.+....+. ..+..+...++++.++..++.+++
T Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~ 207 (694)
T TIGR03375 133 RPKHWFWSTLKESWPL-YRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF----ETLWVLAIGVALAIVFDFVLKTLR 207 (694)
T ss_pred ccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888777553 44556666666777778888999999986543221 222333334444555677889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 125 VACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKG 204 (1236)
Q Consensus 125 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1236)
.++..+.+.++..++|.++|+|++++|+.| +++ ++|++++|+ +|++.+++++...+...+.+++++++.++++++++
T Consensus 208 ~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 284 (694)
T TIGR03375 208 SYFLDVAGKKADLILSAKLFERVLGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIG 284 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 677 899999999 79999999999888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 040099 205 WLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQE 284 (1236)
Q Consensus 205 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 284 (1236)
|.+++++++.+|+++++..++.++.++..++.++..++.++.+.|+++|+++||+|+.|+.+.++|++..++..+...+.
T Consensus 285 ~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 364 (694)
T TIGR03375 285 GPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKS 364 (694)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 040099 285 GLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINR 364 (1236)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 364 (1236)
.+..+....+..++..++.++++++|++++.+|.+|+|++++++.+...+..|+..+...+..++++.++.+|+.++++.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~ 444 (694)
T TIGR03375 365 RFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQL 444 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99998888888888888889999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 040099 365 KPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEV 444 (1236)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 444 (1236)
+++.+... .....+...+.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 445 ~~e~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I 522 (694)
T TIGR03375 445 PVERPEGT-RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSV 522 (694)
T ss_pred CCCCCCCC-CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 76533211 111122345689999999999743 4579999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCC
Q 040099 445 LIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQL 524 (1236)
Q Consensus 445 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 524 (1236)
.+||+|+++++.+++|++|+||+|+|++|++||+|||.+++|++++++++++++.+++++++.++|+||||.+||+|.+|
T Consensus 523 ~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~L 602 (694)
T TIGR03375 523 LLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSL 602 (694)
T ss_pred EECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCC
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeC
Q 040099 525 SGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 525 SgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~ 604 (1236)
||||||||+||||++++|+|||||||||+||+++|+.+.+.|.++.+++|+|+||||+++++.||+|++|++|+++|+|+
T Consensus 603 SgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~ 682 (694)
T TIGR03375 603 SGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGP 682 (694)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCC
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred ccccccc
Q 040099 605 HSELLEN 611 (1236)
Q Consensus 605 ~~~l~~~ 611 (1236)
|+||+++
T Consensus 683 ~~eLl~~ 689 (694)
T TIGR03375 683 KDQVLEA 689 (694)
T ss_pred HHHHHHH
Confidence 9999865
No 23
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.5e-85 Score=817.59 Aligned_cols=566 Identities=32% Similarity=0.498 Sum_probs=505.8
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 47 FHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVA 126 (1236)
Q Consensus 47 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1236)
++.++++.+++++. +++.+++.++..++....|++++.++|........ ..+....+.+++++++..++.++..+
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~ 87 (582)
T PRK11176 13 FRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR----SVLKWMPLVVIGLMILRGITSFISSY 87 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777654 34455555566666667788889899875432111 11222223334455667788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 127 CWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWL 206 (1236)
Q Consensus 127 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1236)
+..+.+.++..++|..+|++++++|.++|++. ++|++++|+++|++.+++.+...+..++.+++++++.++++++++|.
T Consensus 88 ~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (582)
T PRK11176 88 CISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 207 LTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGL 286 (1236)
Q Consensus 207 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 286 (1236)
+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+
T Consensus 167 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T PRK11176 167 LSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 040099 287 ATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKP 366 (1236)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 366 (1236)
.......+..++..+..++++++|++++.+|.+|+|++++++.++.....|+..+...+..+++++.+.+|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~ 326 (582)
T PRK11176 247 ASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQ 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88888888888888888889999999999999999999999999888899999999999999999999999999998765
Q ss_pred CccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 040099 367 EIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLI 446 (1236)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 446 (1236)
+.+... ...++..+.|+++||+|+|+++ ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 327 ~~~~~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i 402 (582)
T PRK11176 327 EKDEGK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILL 402 (582)
T ss_pred cCCCCC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEE
Confidence 432111 1122234579999999999753 357999999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCC-CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 447 DGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH-ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 447 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
||+|+++++.+++|++|+||||||++|++||+|||.+|+++ .++++++++++.+++++++.++|+|+||.+||+|.+||
T Consensus 403 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LS 482 (582)
T PRK11176 403 DGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLS 482 (582)
T ss_pred CCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999764 78999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCc
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~ 605 (1236)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+|+|+|+|
T Consensus 483 GGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~ 562 (582)
T PRK11176 483 GGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTH 562 (582)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccccccchhhhhHHhh
Q 040099 606 SELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 606 ~~l~~~~~~~y~~~~~~~ 623 (1236)
++++++ ++.|++++..|
T Consensus 563 ~~l~~~-~~~y~~l~~~~ 579 (582)
T PRK11176 563 AELLAQ-NGVYAQLHKMQ 579 (582)
T ss_pred HHHHhC-CChHHHHHHHH
Confidence 999988 78999998765
No 24
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6e-85 Score=754.07 Aligned_cols=552 Identities=24% Similarity=0.354 Sum_probs=497.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 65 GTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFYL 144 (1236)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~ 144 (1236)
..+++.+.++......+++..+++.+... +. ...+..+...++++.+++.++.+.+.....+.+.++..++|..++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~-~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEG-QL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555556666777777765433 11 133444555667777888999999999999999999999999999
Q ss_pred HHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 040099 145 ETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGVV 224 (1236)
Q Consensus 145 ~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~ 224 (1236)
+|+.++++.+-++. ++|+..+.++..++.++.+++..++.++.+.+..+..++.+|++||.-++++++++|++.+++..
T Consensus 81 ~~l~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 81 DKLAKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHHHhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 040099 225 MIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYG 304 (1236)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (1236)
++++.++..+++...+..+++.+.|.++|+.|+|.|++.+...+++.+..+++++..++.-++.-....+..++.+++.+
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiA 239 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIA 239 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred HHHHHHHHHHHh-cCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCCCC
Q 040099 305 LGVWYGAKLILE-KGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDIRG 383 (1236)
Q Consensus 305 ~~~~~g~~~v~~-g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~ 383 (1236)
++..+.+..... |.+|....+.++...--++.|++.++..++.-+.+.++.++++.+++.|++..+...........+.
T Consensus 240 lvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (559)
T COG4988 240 LVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPI 319 (559)
T ss_pred HHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCc
Confidence 888877777777 8999887777766666678999999999999999999999999999987654332110011111233
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
+++.+|++|.||++ +++++|+||++++|+.+||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||+++
T Consensus 320 ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 320 EISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred eeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHe
Confidence 45566999999853 3899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCC
Q 040099 464 GLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPR 543 (1236)
Q Consensus 464 ~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ 543 (1236)
+||+|+|++|++||||||++++++++++++.++++.+++.+|+.. |+|+||.+||+|.+|||||+||+++|||++++++
T Consensus 398 ~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 398 SWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHHhh
Q 040099 544 ILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 544 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~ 623 (1236)
++|||||||+||.+||+.|.+.|.++.+++|+|+||||+..+++||+|+|||+|+++|+|+|++|.++ +|.|++++..|
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q 555 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQ 555 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 89999999876
Q ss_pred hh
Q 040099 624 ET 625 (1236)
Q Consensus 624 ~~ 625 (1236)
+.
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 53
No 25
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-89 Score=749.14 Aligned_cols=552 Identities=27% Similarity=0.365 Sum_probs=470.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 65 GTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLA------LGAGVASFFQVACWMITGERQAAR 138 (1236)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1236)
+.++..+.-++....|.+.++++|.+...... .. ......+.+. -++.+++-++.++|..+.+-..++
T Consensus 220 cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~---~~---~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ 293 (790)
T KOG0056|consen 220 CLFLLIIGRLINVSLPILSKWIVDELTAPDTF---QY---SLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTRE 293 (790)
T ss_pred HHHHHHHHHHHhhhhHHhHHHHHHhhcCcchh---hH---HHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHH
Confidence 33333444455666778889999987633111 11 1111222222 233567778889999999999999
Q ss_pred HHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHH
Q 040099 139 IRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFL-IAFFKGWLLTLTMLSSIPP 217 (1236)
Q Consensus 139 lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~l~~~p~ 217 (1236)
+-..+|+|+..++++|+-++ ++|+++.-++..++.+. ++...+.++...++-+.++++ +...+||..+++++++..+
T Consensus 294 ie~~lfrHlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~l 371 (790)
T KOG0056|consen 294 IETELFRHLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLL 371 (790)
T ss_pred HHHHHHHHHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHH
Confidence 99999999999999999998 99999988887766665 444444444444443333333 3445789999998888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 040099 218 LVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVF 297 (1236)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1236)
...+...+..--.+..+++.....+..+...+++-+..|||-||+|+++.++|.+...++.+...|......+.+..-+.
T Consensus 372 Y~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~ 451 (790)
T KOG0056|consen 372 YCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNG 451 (790)
T ss_pred HhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77666555555555666666666777778899999999999999999999999999999988888876666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCC
Q 040099 298 IIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKK 377 (1236)
Q Consensus 298 ~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~ 377 (1236)
+..++.+..-.+.+|+|..+.+|+|+++.|..|+++..+|+..++..+..+|+...-+++++++++++||+.+.+ ...+
T Consensus 452 Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~a~p 530 (790)
T KOG0056|consen 452 IIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-GAPP 530 (790)
T ss_pred hhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-CCCC
Confidence 666666666667788899999999999999999999999999999999999999999999999999998876644 2334
Q ss_pred CCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH
Q 040099 378 LDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK 457 (1236)
Q Consensus 378 ~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 457 (1236)
....+|.|+|+||+|+|+ +++++|+||||+++||+++|+|||||+||||++++|.|||+.++|+|.+||+||++....
T Consensus 531 l~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~ 608 (790)
T KOG0056|consen 531 LKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQS 608 (790)
T ss_pred ccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHH
Confidence 455678999999999996 567999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 458 WIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
++|++||+||||..||++||..||.||+|.+++||+.+|+++|++||-|..+|+||+|.|||+|-.||||||||+||||+
T Consensus 609 SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARt 688 (790)
T KOG0056|consen 609 SLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIART 688 (790)
T ss_pred HHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhh
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYN 617 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~ 617 (1236)
++++|.|++|||+|||||..||+.|+.+|.++..+||.|+|+||+||+-+||.|+|+++|+|+|.|+|+||+.+++|.|+
T Consensus 689 iLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya 768 (790)
T KOG0056|consen 689 ILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYA 768 (790)
T ss_pred HhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred hhHHhhhhhh
Q 040099 618 RLIRLQETCK 627 (1236)
Q Consensus 618 ~~~~~~~~~~ 627 (1236)
+||+.|+...
T Consensus 769 ~MWq~qqa~g 778 (790)
T KOG0056|consen 769 DMWQAQQAMG 778 (790)
T ss_pred HHHHHHHhcC
Confidence 9998876543
No 26
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1e-84 Score=827.19 Aligned_cols=568 Identities=27% Similarity=0.389 Sum_probs=511.6
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQ 124 (1236)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1236)
..+.+++++++++++. +...++++++..++....|++++.++|.+....+. ..+..+.+.++++.++..++.+++
T Consensus 125 ~~~~~~~~~~~~~~~~-~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~----~~l~~l~~~~~~~~~~~~~~~~l~ 199 (694)
T TIGR01846 125 FGFSWFIPAIIRYRKQ-FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGL----STLSVLALAMLAVAIFEPALGGLR 199 (694)
T ss_pred CcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577788887776553 34555566666666777888999999987543221 223333444555566677889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 125 VACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKG 204 (1236)
Q Consensus 125 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1236)
.++....+.++..++|.++|+|++++|++||+++ ++|++++|+ +|++.+++++...+..++.++++.++.++++++++
T Consensus 200 ~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 277 (694)
T TIGR01846 200 TYLFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYS 277 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999 69999999998888888888887777888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 040099 205 WLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQE 284 (1236)
Q Consensus 205 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 284 (1236)
|.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+||.|+.+.++|++..++..+...+.
T Consensus 278 ~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 357 (694)
T TIGR01846 278 PTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRV 357 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 040099 285 GLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINR 364 (1236)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 364 (1236)
.+..+....+..++..+..++++|+|++++.+|.+|+|+++++..+......|+..+...+..++++..+++|+.++++.
T Consensus 358 ~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 437 (694)
T TIGR01846 358 TNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNS 437 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99888888888888888899999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEE
Q 040099 365 KPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEV 444 (1236)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 444 (1236)
+++.+... ....+...+.|+++||+|+|+++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|
T Consensus 438 ~~e~~~~~--~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I 514 (694)
T TIGR01846 438 PTEPRSAG--LAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV 514 (694)
T ss_pred CCCccCCC--CCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 76543211 11123345689999999999743 3579999999999999999999999999999999999999999999
Q ss_pred EECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCC
Q 040099 445 LIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQL 524 (1236)
Q Consensus 445 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 524 (1236)
++||+|+++++.+++|++|+||+|++++|++||+|||.+++|++++++++++++.+++++++.++|+|+||.+|++|.+|
T Consensus 515 ~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~L 594 (694)
T TIGR01846 515 LVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANL 594 (694)
T ss_pred EECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCC
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeC
Q 040099 525 SGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 525 SgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~ 604 (1236)
|||||||++||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|+++++|+
T Consensus 595 SgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~ 674 (694)
T TIGR01846 595 SGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGR 674 (694)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred cccccccccchhhhhHHhh
Q 040099 605 HSELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 605 ~~~l~~~~~~~y~~~~~~~ 623 (1236)
|+|++++ ++.|+++++.|
T Consensus 675 ~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 675 HEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred HHHHHHc-CChHHHHHHhh
Confidence 9999988 79999998754
No 27
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.4e-84 Score=806.08 Aligned_cols=566 Identities=24% Similarity=0.327 Sum_probs=489.9
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 47 FHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVA 126 (1236)
Q Consensus 47 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1236)
+++++.|.+++++. +++.+++.++.+++.+..|+++++++|.+....+.. . .....+++.++++.++..++.+++.+
T Consensus 11 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (592)
T PRK10790 11 LKRLLAYGSPWRKP-LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLP-L-GLVAGLAAAYVGLQLLAAGLHYAQSL 87 (592)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-h-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666553 456666777777888888999999999764321211 0 11111222344444566778888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 127 CWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWL 206 (1236)
Q Consensus 127 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1236)
.....+.++..++|.++|++++++|+++|++. ++|++++|+++|++.+++.+...+..++.+++.+++.++++++++|.
T Consensus 88 ~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 88 LFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 207 LTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGL 286 (1236)
Q Consensus 207 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 286 (1236)
+++++++++|+++++..++.++.++..++.++..++.++.+.|.+.|+++||+|+.|+.+.++|.+..++..+...+..+
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888889999999999999999999999999999999999998888888777766
Q ss_pred HHHHh-HHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 040099 287 ATGLG-LGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRK 365 (1236)
Q Consensus 287 ~~~~~-~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 365 (1236)
..+.. .++..++..+..++++++++. +.+|.+++|.+++++.+......|+..+...+..++++..+++|+.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 325 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGP 325 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 65543 334444444433333334444 6899999999999999999999999999999999999999999999999865
Q ss_pred CCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 040099 366 PEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVL 445 (1236)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 445 (1236)
++.... ...+...++|+|+||+|+|++ ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 326 ~~~~~~----~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 326 RQQYGN----DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred CccCCC----CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 542211 111223467999999999974 35799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 446 IDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 446 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
+||+|+++++.+++|++|+||||||++|++||+|||.+++ ++++++++++++.+++++++.++|+||||.+||+|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999998 679999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCc
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~ 605 (1236)
|||||||+|||||+++|+|||||||||+||+++++.|.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred ccccccccchhhhhHHhhhh
Q 040099 606 SELLENPYGAYNRLIRLQET 625 (1236)
Q Consensus 606 ~~l~~~~~~~y~~~~~~~~~ 625 (1236)
+||+++ ++.|+++++.|..
T Consensus 559 ~~L~~~-~~~y~~l~~~~~~ 577 (592)
T PRK10790 559 QQLLAA-QGRYWQMYQLQLA 577 (592)
T ss_pred HHHHhC-CCHHHHHHHHHhh
Confidence 999988 7999999987643
No 28
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3e-83 Score=795.86 Aligned_cols=564 Identities=26% Similarity=0.358 Sum_probs=497.9
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 47 FHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVA 126 (1236)
Q Consensus 47 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1236)
++++++|++++++ .++++++++++.+++.+..|+++++++|.+....+ .....+.++++.++..+..++..+
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 78 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKSD-------VLPTLALWAGFGVFNTIAYVLVAR 78 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678888888765 44667777778888888899999999997653211 111111122233334444555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 127 CWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWL 206 (1236)
Q Consensus 127 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1236)
+....+.++..++|.++|+|++++|++||+++ ++|++++|+++|++.+++++...+..++..++++++.++++++++|.
T Consensus 79 ~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 157 (585)
T TIGR01192 79 EADRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWR 157 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666667777899999999999999998 99999999999999999999999988888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 207 LTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGL 286 (1236)
Q Consensus 207 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 286 (1236)
+++++++++|+++++..++.++.++..++.++..+++.+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+
T Consensus 158 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (585)
T TIGR01192 158 LSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLD 237 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888888
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 040099 287 ATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKP 366 (1236)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 366 (1236)
..+...++..++..+..++++++|++++.+|.+|+|++++++.++.....|+.++...+..++++..+.+|+.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~ 317 (585)
T TIGR01192 238 WWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVF 317 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 88887777777888888889999999999999999999999999999999999999999999999999999999998765
Q ss_pred CccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 040099 367 EIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLI 446 (1236)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 446 (1236)
+.++.. .....+...+.++++||+|+|++ ++++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+|.+
T Consensus 318 ~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 394 (585)
T TIGR01192 318 QREEPA-DAPELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILI 394 (585)
T ss_pred cccCCc-cCCCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEE
Confidence 432211 11112223457999999999974 246999999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 447 DGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 447 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
||.++++++.+++|++++||+|+|++|++|++|||.++.+++++++++++++.+++++++.++|+|++|.+|++|.+|||
T Consensus 395 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSg 474 (585)
T TIGR01192 395 DGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSG 474 (585)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcc
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~ 606 (1236)
|||||++|||||+++|++||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|+
T Consensus 475 Gq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 475 GERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred cccccccchhhhhHHhh
Q 040099 607 ELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 607 ~l~~~~~~~y~~~~~~~ 623 (1236)
+++++ ++.|++++..+
T Consensus 555 ~l~~~-~~~y~~l~~~~ 570 (585)
T TIGR01192 555 ELIQK-DGRFYKLLRRS 570 (585)
T ss_pred HHHHC-CChHHHHHHhC
Confidence 99987 79999998765
No 29
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.1e-83 Score=801.75 Aligned_cols=566 Identities=33% Similarity=0.518 Sum_probs=513.8
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 47 FHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVA 126 (1236)
Q Consensus 47 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1236)
+++++++.+++++ .++++++++++.+++.+..|++++.++|........ ..+......++++.++..++.+++.+
T Consensus 2 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (571)
T TIGR02203 2 FRRLWSYVRPYKA-GLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDR----SVLWWVPLVVIGLAVLRGICSFVSTY 76 (571)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666766654 456777777888888888899999999965432111 22333344455666677788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 127 CWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWL 206 (1236)
Q Consensus 127 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1236)
+..+.+.++..++|..+|+++++.|.++|++. ++|++++|+++|++.+++++...+..++.+++.+++.++++++++|.
T Consensus 77 ~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 155 (571)
T TIGR02203 77 LLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQ 155 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 207 LTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGL 286 (1236)
Q Consensus 207 l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 286 (1236)
+++++++..|+.+++..++.++.++..++.++..++..+.+.|.++|+++||.++.++.+.++|++..++..+...+..+
T Consensus 156 l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (571)
T TIGR02203 156 LTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTS 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 040099 287 ATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKP 366 (1236)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 366 (1236)
..+....+..++..+..++++++|++++.+|.+|+|.++++..++.....|+..+...+..+++++++.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (571)
T TIGR02203 236 AGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPP 315 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888888888888889999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEE
Q 040099 367 EIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLI 446 (1236)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 446 (1236)
+.+... ...++..++|+++||+|+|+++ ++++|+|+||+|++||+++|+|+||||||||+++|+|+|+|++|+|++
T Consensus 316 ~~~~~~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i 391 (571)
T TIGR02203 316 EKDTGT---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILL 391 (571)
T ss_pred CCCCCC---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEE
Confidence 543211 1112234679999999999753 357999999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCC-CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 447 DGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKT-HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 447 ~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
||+|+++++.+++|++|+||||+|++|++|++|||.++++ +.++++++++++.+++++++.++|+|+||.+||+|.+||
T Consensus 392 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LS 471 (571)
T TIGR02203 392 DGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLS 471 (571)
T ss_pred CCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCC
Confidence 9999999999999999999999999999999999999986 789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCc
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~ 605 (1236)
|||||||+||||++++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 472 gGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~ 551 (571)
T TIGR02203 472 GGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTH 551 (571)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccccccchhhhhHHhh
Q 040099 606 SELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 606 ~~l~~~~~~~y~~~~~~~ 623 (1236)
++++++ ++.|++++..+
T Consensus 552 ~~l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 552 NELLAR-NGLYAQLHNMQ 568 (571)
T ss_pred HHHHHc-CCHHHHHHHHh
Confidence 999987 68899887654
No 30
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.9e-84 Score=802.05 Aligned_cols=538 Identities=35% Similarity=0.583 Sum_probs=483.5
Q ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 685 EVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRI 764 (1236)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 764 (1236)
.+ .+.++.++.++........+++++.+++.... .......+...++++.++..++.++..+...+.+.+...++
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l 87 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA----DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADL 87 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45 56666666666666666777777777776651 12223344555556666777788888888888889999999
Q ss_pred HHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 040099 765 RSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLL 844 (1236)
Q Consensus 765 r~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~ 844 (1236)
|.++++++++.|++||++ +++|++++|+++|++.++..+.+....+...+..+++.+++++..+|.+++++++..|++
T Consensus 88 r~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~ 165 (567)
T COG1132 88 RRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLL 165 (567)
T ss_pred HHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999999994 789999999999999999999988666666788899999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 845 GITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFF 924 (1236)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (1236)
.+...+..++.++..+..++..++..+.+.|.++|+++||+|+.++...+++.+..+...+...+.........++...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (567)
T COG1132 166 ALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLL 245 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888777888888888899999999999999999999999999999999999999888888888888888888899
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCcc
Q 040099 925 FFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTL 1004 (1236)
Q Consensus 925 ~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~ 1004 (1236)
..+..++++++|.+++..+.+++|.+++++.+......++..+......+..+..+++|++++++.+++....+.. .
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~ 322 (567)
T COG1132 246 SSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---L 322 (567)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---C
Confidence 9999999999999999999999999999999999999999999999999999999999999999986654322211 2
Q ss_pred CCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH
Q 040099 1005 ENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW 1084 (1236)
Q Consensus 1005 ~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~ 1084 (1236)
....|+|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|||+|++|+|+|||+||++++.++
T Consensus 323 ~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~ 400 (567)
T COG1132 323 KDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDS 400 (567)
T ss_pred CCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHH
Confidence 334578999999999985 346999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHH
Q 040099 1085 LRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAI 1149 (1236)
Q Consensus 1085 lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARAL 1149 (1236)
||++|++|||||+||+|||+|||. +.|+++|||+++|+||||.|||+|.+||||||||||||||+
T Consensus 401 lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARal 480 (567)
T COG1132 401 LRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARAL 480 (567)
T ss_pred HHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHH
Confidence 999999999999999999999995 77899999999999999999999999999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHH
Q 040099 1150 VKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTS 1229 (1236)
Q Consensus 1150 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1229 (1236)
++||||||||||||+||++||+.|++++++..++||+|+||||++|+++||+|+|||+|+|+|.|+|+||+++ +|.|++
T Consensus 481 l~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~ 559 (567)
T COG1132 481 LRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYAR 559 (567)
T ss_pred hcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHH
Confidence 9999999999999999999999999999988888999999999999999999999999999999999999997 999999
Q ss_pred hhhccC
Q 040099 1230 LIEPHT 1235 (1236)
Q Consensus 1230 L~~~q~ 1235 (1236)
||+.|.
T Consensus 560 l~~~~~ 565 (567)
T COG1132 560 LYQAQG 565 (567)
T ss_pred HHHHhh
Confidence 999875
No 31
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=9.9e-84 Score=795.82 Aligned_cols=526 Identities=22% Similarity=0.296 Sum_probs=461.3
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 48 HKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVAC 127 (1236)
Q Consensus 48 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (1236)
+++++|.+++++. ++++++++++.+++....|++++.++|..... +. . .........++++.++..++.++..++
T Consensus 2 ~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (529)
T TIGR02868 2 LRILPLLQPRTRR-LVVAILLGALALGSAVALLGVSAWLISRAAEM-PP-V--LYLSVAAVAVRAFGIGRAVFRYLERLV 76 (529)
T ss_pred hhHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ch-h--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777653 45566666777777777888999999975432 11 0 001111112223445667788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 040099 128 WMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLL 207 (1236)
Q Consensus 128 ~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (1236)
..+.+.++..++|.++|+|++++|.+||++. ++|++++|+++|++.+++.+...+..++.+++.+++.++++++++|.+
T Consensus 77 ~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 155 (529)
T TIGR02868 77 GHDAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPA 155 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 208 TLTMLSSIPPLVIAGVVMI-KLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGL 286 (1236)
Q Consensus 208 ~l~~l~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 286 (1236)
++++++.+|++.++...+. +..++..++.++..+++.+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+
T Consensus 156 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (529)
T TIGR02868 156 ALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAAR 235 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888766654444 445666777888899999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 040099 287 ATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKP 366 (1236)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 366 (1236)
..+...++..++..+..++++|+|++++.+|.+|+|.+++++.+......|+..+...+..++++.++.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (529)
T TIGR02868 236 ATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKG 315 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88888888888888888899999999999999999999999999999999999999999999999999999999998766
Q ss_pred CccccccC-CCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 040099 367 EIDLCCVN-GKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVL 445 (1236)
Q Consensus 367 ~~~~~~~~-~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 445 (1236)
+.+..... ....++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~ 393 (529)
T TIGR02868 316 PRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVT 393 (529)
T ss_pred CcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 53221100 01111234579999999999743 4699999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 446 IDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 446 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
+||+|++++ .+++|++|+||||+|+||++||+|||++|+|+++++++++|++.+++++|+.++|+||||.+||+|.+||
T Consensus 394 i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LS 472 (529)
T TIGR02868 394 LDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLS 472 (529)
T ss_pred ECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCC
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCc
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRL 582 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~ 582 (1236)
||||||||||||++++|+|||||||||+||+++|+.|++.+.++.+++|+|+||||+
T Consensus 473 GGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 473 GGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999988899999999995
No 32
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.5e-83 Score=796.62 Aligned_cols=566 Identities=28% Similarity=0.382 Sum_probs=495.6
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 46 PFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQV 125 (1236)
Q Consensus 46 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (1236)
.+++++++.+++++ .+.+.++++++..++.+..|++++.++|.+..... .....+.+++++++..+..++..
T Consensus 6 ~~~~l~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 77 (588)
T PRK13657 6 LYARVLQYLGAEKR-LGILLAVANVLLAAATFAEPILFGRIIDAISGKGD-------IFPLLAAWAGFGLFNIIAGVLVA 77 (588)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777776654 34556666667777777788899999997653211 11112222233333334445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 040099 126 ACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGW 205 (1236)
Q Consensus 126 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (1236)
++..+...++..++|.++|+|++++|+.+|++. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++|
T Consensus 78 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (588)
T PRK13657 78 RHADRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNW 156 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566666666777799999999999999998 9999999999999999999888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 206 LLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEG 285 (1236)
Q Consensus 206 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 285 (1236)
.+++++++++|+.+++..++.++.++..++.++..+++++.+.|.++|+++||.|+.++.+.++|.+..++..+...+..
T Consensus 157 ~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (588)
T PRK13657 157 RLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVL 236 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 040099 286 LATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRK 365 (1236)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 365 (1236)
...+....+..++..+..++++++|++++.+|.+|+|++++++.+......|+..+...+..++++..+++|+.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~ 316 (588)
T PRK13657 237 SWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAV 316 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 88888777778888888888999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 040099 366 PEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVL 445 (1236)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 445 (1236)
++.+... .....+...+.|+++||+|+||+ ++++|+|+||+++|||++||+|+||||||||+++|+|+|+|++|+|+
T Consensus 317 ~~~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~ 393 (588)
T PRK13657 317 PDVRDPP-GAIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRIL 393 (588)
T ss_pred cccCCCC-CCCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEE
Confidence 5432211 11111223457999999999974 24699999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 446 IDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 446 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
+||+|+++++.+++|++|+||||+|++|++||+|||++++|+.++++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 394 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LS 473 (588)
T PRK13657 394 IDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLS 473 (588)
T ss_pred ECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCc
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~ 605 (1236)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 474 gGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~ 553 (588)
T PRK13657 474 GGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSF 553 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999998789999999999999999999999999999999999
Q ss_pred ccccccccchhhhhHHhhh
Q 040099 606 SELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 606 ~~l~~~~~~~y~~~~~~~~ 624 (1236)
++++++ ++.|++++..+.
T Consensus 554 ~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 554 DELVAR-GGRFAALLRAQG 571 (588)
T ss_pred HHHHHC-CChHHHHHHHhh
Confidence 999987 799999987553
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-83 Score=728.80 Aligned_cols=569 Identities=28% Similarity=0.389 Sum_probs=484.5
Q ss_pred HHHHHHhhchhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchhHHHhhHHHHHHHHHHHHHHHHHHH
Q 040099 47 FHKLLSFADLLD----SVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQN-ATKTLAIHGVLKVSKKFVYLALGAGVAS 121 (1236)
Q Consensus 47 ~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1236)
.+.+..|.+|.. +..++.++++.+.+..+....|.+++.++|.+... ..+ .........+..+.++.++..+++
T Consensus 13 ~~~l~~~~~~k~~p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~-a~~~~~~~~~~~y~iar~~s~~F~ 91 (591)
T KOG0057|consen 13 LRSLVSYKWPKSRPVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNP-AVLSTITALLAGYGIARLGSSVFN 91 (591)
T ss_pred HHHHHhhheecCCceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCc-chhhhhhHHHHHHHHHHHHHHHHH
Confidence 445555555443 22344445555555678888899999999986311 111 111222233445566667788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 040099 122 FFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGF-LIA 200 (1236)
Q Consensus 122 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~ 200 (1236)
.++...+.++.+++..+.-.++|+|++++++++|.+. .+|++.+.+..-...|..++...+..++..++-+.... .+-
T Consensus 92 el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~ 170 (591)
T KOG0057|consen 92 ELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILY 170 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 99999999999999999999888888777766554433 334
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 040099 201 FFKGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKS 280 (1236)
Q Consensus 201 ~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~ 280 (1236)
.-..+..+++++..+..+..++......-.+..++..++.......+-|++.+..+||+||.|++|.++|+....++.+.
T Consensus 171 ~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~ 250 (591)
T KOG0057|consen 171 YKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERA 250 (591)
T ss_pred HHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHh
Confidence 44566677777776666666666666666666677788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 281 SVQEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFE 360 (1236)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~ 360 (1236)
..+.....++....-.++.......+.+.|..-+.+|.+|+|+++.......++..|+..++..+..+.++..-+.-.+.
T Consensus 251 ~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~ 330 (591)
T KOG0057|consen 251 GLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFI 330 (591)
T ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 99988888887777777777788888888988899999999999999888899999999999988888887777766665
Q ss_pred HhccCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC
Q 040099 361 AINRKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ 440 (1236)
Q Consensus 361 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~ 440 (1236)
..+....+.+ .+.++...++.|+|+||+|+|+ +++++|+++||+|++||+|||||+|||||||++|+|.||++ +
T Consensus 331 l~~~~~~i~~---~~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~ 404 (591)
T KOG0057|consen 331 LLEVDEDIQE---AALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-Y 404 (591)
T ss_pred hhhhhhhhhh---ccCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-c
Confidence 5443222221 1123344567899999999997 45679999999999999999999999999999999999999 9
Q ss_pred CcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCC
Q 040099 441 AGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEH 520 (1236)
Q Consensus 441 ~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~ 520 (1236)
+|+|++||+|+++++++++|+.|||||||..||++||.+||.||++.+++||+.++|+.+++||-+.++|+||+|.+||+
T Consensus 405 sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGer 484 (591)
T KOG0057|consen 405 SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGER 484 (591)
T ss_pred CCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEE
Q 040099 521 GIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIV 600 (1236)
Q Consensus 521 g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~ 600 (1236)
|..|||||||||+||||+++||||+++|||||+||.+||+.+.+.+.+...+||+|+|.||++++++||+|++++||++.
T Consensus 485 G~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~ 564 (591)
T KOG0057|consen 485 GLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVK 564 (591)
T ss_pred ccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeE
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred EEeCcccccccccchhhhhHHhhh
Q 040099 601 EKGTHSELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 601 ~~g~~~~l~~~~~~~y~~~~~~~~ 624 (1236)
|.|+|+||++ +.+.|+++|..|.
T Consensus 565 e~gth~ell~-~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 565 EYGTHSELLA-PSELYADLWTTQT 587 (591)
T ss_pred EeccHHHHhh-hhhHHHHHhcccc
Confidence 9999999999 4899999998764
No 34
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-82 Score=790.04 Aligned_cols=544 Identities=26% Similarity=0.355 Sum_probs=485.4
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Q 040099 73 GLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDI 152 (1236)
Q Consensus 73 ~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~ 152 (1236)
.++..+.|++++.++|.+...... ...+..+...++++.++..++.++..++....+.++..++|.++|+|++++|+
T Consensus 8 ~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 8 AMLQLIPPKVVGIIVDGVTEQHMT---TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 344455677899999976432111 01122233334444556677788888888899999999999999999999999
Q ss_pred hhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 153 AFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIA-FFKGWLLTLTMLSSIPPLVIAGVVMIKLVGN 231 (1236)
Q Consensus 153 ~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~ 231 (1236)
++|++. ++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.++.++
T Consensus 85 ~~~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 85 EFYLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 99999999999999999888888888888877766666655 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 040099 232 LASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVWYGA 311 (1236)
Q Consensus 232 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 311 (1236)
..++.++..+++++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+..+...++...+..++.++++++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888888877777777788888899999
Q ss_pred HHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCCCCcEEEEeEE
Q 040099 312 KLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDIRGDIELKDVN 391 (1236)
Q Consensus 312 ~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~ 391 (1236)
+++.+|.+|+|+++++..+......|+..++..+..++++.++.+|+.++++.+++.+... ...+..++.|+++||+
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~ 320 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQ 320 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999998765532211 1122234679999999
Q ss_pred EECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCC
Q 040099 392 FSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPV 471 (1236)
Q Consensus 392 f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~ 471 (1236)
|+|+.. ++++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|++||+++++++..++|++|+||+|+|+
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999743 3579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcC
Q 040099 472 LLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEAT 551 (1236)
Q Consensus 472 l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~t 551 (1236)
+|++|++|||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+||||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHHhhhh
Q 040099 552 SALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQET 625 (1236)
Q Consensus 552 s~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~~ 625 (1236)
|+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|+++++|+|++++++ ++.|++++..|..
T Consensus 480 s~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 480 SAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999998889999999999999999999999999999999999999987 7999999987643
No 35
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.9e-83 Score=798.85 Aligned_cols=552 Identities=21% Similarity=0.275 Sum_probs=472.1
Q ss_pred hHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 675 LSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFA 754 (1236)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 754 (1236)
+++++.+.+++++.++++++++++.+++.+..+++++.+++....+... ......+...++++.++..++.+++.+...
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP-REALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667778888889898999888888888888888888888865321111 111223444455556667778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 040099 755 VAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLA 834 (1236)
Q Consensus 755 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~ 834 (1236)
..+.++..++|.++|++++++|.+||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 166 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAG 166 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 488999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040099 835 LLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMS 914 (1236)
Q Consensus 835 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1236)
+++++.+|+.++...+..++.++..++..+..++..+.+.|.++|+++||+|+.++++.++|.+..++..+...+.....
T Consensus 167 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK11174 167 LILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMA 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888888899999999999999999999999999999999999888877777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 915 GIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEV---------FRVFFALSMTAIGISQTSSLASDASKAKSSAASVF 985 (1236)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 985 (1236)
.....+...+..+..+++.+++++.+. |.+++|.+ +.+..+...+..|+..+...+..+.++..+++|+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~ 325 (588)
T PRK11174 247 FLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLV 325 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666555555555455455544433 67777654 22223444567889999999999999999999999
Q ss_pred HHHhcccccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC
Q 040099 986 GLIDQVSKIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP 1065 (1236)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~ 1065 (1236)
++++.+++.+.... ...+....++|+|+||+|.|+++ .++|+|+||+|+|||++|||||||||||||+++|+|+| |
T Consensus 326 ~~l~~~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~~--~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p 401 (588)
T PRK11174 326 TFLETPLAHPQQGE-KELASNDPVTIEAEDLEILSPDG--KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P 401 (588)
T ss_pred HHHcCCCcccCCCc-cccCCCCCceEEEEeeEEeccCC--CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C
Confidence 99987543221111 00111124579999999988643 46999999999999999999999999999999999999 9
Q ss_pred CCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcC
Q 040099 1066 SSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGE 1130 (1236)
Q Consensus 1066 ~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge 1130 (1236)
++|+|++||+|+++++.+++|++|+||||||+||+|||||||. +.+++++++.++|+||||.|||
T Consensus 402 ~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge 481 (588)
T PRK11174 402 YQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGD 481 (588)
T ss_pred CCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccccc
Confidence 9999999999999999999999999999999999999999994 6789999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEE
Q 040099 1131 RGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMI 1210 (1236)
Q Consensus 1131 ~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~I 1210 (1236)
+|.+||||||||||||||+++||+|||||||||+||++||+.|+++|++..+++|+|+||||++++++||+|+||++|+|
T Consensus 482 ~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i 561 (588)
T PRK11174 482 QAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQI 561 (588)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EEecChhHHhhccCcccHHhhhccC
Q 040099 1211 VEKGSHESLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1211 ve~Gt~~eLl~~~~g~y~~L~~~q~ 1235 (1236)
+|.|+|+||+++ +|.|++|++.|.
T Consensus 562 ~e~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 562 VQQGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred eecCCHHHHHhc-chHHHHHHHHhh
Confidence 999999999996 899999998774
No 36
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.2e-82 Score=806.64 Aligned_cols=550 Identities=33% Similarity=0.479 Sum_probs=489.8
Q ss_pred chhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 673 VSLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYC 752 (1236)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 752 (1236)
..+++++.+.++.++.+..++++.++..+.....+++.+.+++....... .........+++++.++..++.+++.++
T Consensus 147 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 224 (711)
T TIGR00958 147 DLLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG--PPALASAIFFMCLLSIASSVSAGLRGGS 224 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777778888888888888888888888888888888887643211 1112223344445556677788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 753 FAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQ 832 (1236)
Q Consensus 753 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~ 832 (1236)
+.+.+.++..++|.++|++++++|++||+ ++++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.
T Consensus 225 ~~~~~~~~~~~lr~~l~~~ll~~~~~~f~--~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~ 302 (711)
T TIGR00958 225 FNYTMARINLRIREDLFRSLLRQDLGFFD--ENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPR 302 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999998 4789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHH
Q 040099 833 LALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGL 912 (1236)
Q Consensus 833 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1236)
+++++++..|+.+++..++.++.++..++.++..++..+.+.|+++|+++||+|+.|+++.++|.+..++..+...+...
T Consensus 303 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 382 (711)
T TIGR00958 303 LTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKAL 382 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888888888888999999999999999999999999999999999999888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 040099 913 MSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVS 992 (1236)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 992 (1236)
...........+..+..++++++|++++..|.++.|+++++..+......++..+.....++.++..+.+|++++++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 462 (711)
T TIGR00958 383 AYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKP 462 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 77776677777777788888999999999999999999999999999999999999999999999999999999998765
Q ss_pred ccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEE
Q 040099 993 KIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITL 1072 (1236)
Q Consensus 993 ~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~i 1072 (1236)
+.+.... ..+.+..+.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 463 ~~~~~~~--~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 463 NIPLTGT--LAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred CCCCCCC--CCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 5432211 11223457899999999999766668999999999999999999999999999999999999999999999
Q ss_pred CCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCCh
Q 040099 1073 DGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSG 1137 (1236)
Q Consensus 1073 dG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSG 1137 (1236)
||+|+++++.+++|++|+||||||++|+|||||||. +.++++++++++|+||||.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 999999999999999999999999999999999994 67889999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChh
Q 040099 1138 GQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHE 1217 (1236)
Q Consensus 1138 GQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~ 1217 (1236)
|||||||||||+++||+|||||||||+||+++|+.|++ ....+++|+|+||||+++++.||+|+||++|+|+|.|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999999 3345789999999999999999999999999999999999
Q ss_pred HHhhccCcccHHhh
Q 040099 1218 SLISTKNGIYTSLI 1231 (1236)
Q Consensus 1218 eLl~~~~g~y~~L~ 1231 (1236)
||+++ +|.|++|+
T Consensus 699 eL~~~-~~~y~~lv 711 (711)
T TIGR00958 699 QLMED-QGCYKHLV 711 (711)
T ss_pred HHHhC-CCchHhcC
Confidence 99997 88999875
No 37
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=7e-82 Score=788.40 Aligned_cols=571 Identities=35% Similarity=0.543 Sum_probs=504.6
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 46 PFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQV 125 (1236)
Q Consensus 46 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (1236)
.++.+++|.+++++ .+.+.+++.++.+++....|++++.++|.+....+. ..+.....+++++.++..++.+++.
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (576)
T TIGR02204 5 PLAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSS----GLLNRYFAFLLVVALVLALGTAARF 79 (576)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777776654 345566667777888888899999999974432121 1122223334444455667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 040099 126 ACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGW 205 (1236)
Q Consensus 126 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (1236)
++...+++++..++|..+|++++++|.++|++. ++|++++|+++|++.+++++...+..++.+++.+++.++++++++|
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP 158 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 899999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 206 LLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEG 285 (1236)
Q Consensus 206 ~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 285 (1236)
.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 159 ~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (576)
T TIGR02204 159 KLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRI 238 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888999999999999999999999999999999999999999999999999999998888888887
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 040099 286 LATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRK 365 (1236)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 365 (1236)
........+..++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+.+|+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~ 318 (576)
T TIGR02204 239 RTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAE 318 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77777777776777777788889999999999999999999999999999999999999999999999999999999876
Q ss_pred CCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 040099 366 PEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVL 445 (1236)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 445 (1236)
++.+..........+..+.|+++||+|+||+++++++|+|+||+++|||+++|+||||||||||+++|+|+|+|++|+|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~ 398 (576)
T TIGR02204 319 PDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRIL 398 (576)
T ss_pred CcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEE
Confidence 54322110111111224579999999999854336799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 446 IDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 446 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
+||.|+++++.+++|++|+||||+|++|++||+|||.+++|+.++++++++++.+++++++.++|+|+||.+||+|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCc
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~ 605 (1236)
||||||++||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~ 558 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTH 558 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccccccchhhhhHHhh
Q 040099 606 SELLENPYGAYNRLIRLQ 623 (1236)
Q Consensus 606 ~~l~~~~~~~y~~~~~~~ 623 (1236)
++++++ ++.|+++++.|
T Consensus 559 ~~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 559 AELIAK-GGLYARLARLQ 575 (576)
T ss_pred HHHHHc-CChHHHHHhhc
Confidence 999987 78999988654
No 38
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.1e-81 Score=793.03 Aligned_cols=548 Identities=24% Similarity=0.336 Sum_probs=483.2
Q ss_pred hHHHhhh-cCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 675 LSRLAYL-NSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCF 753 (1236)
Q Consensus 675 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 753 (1236)
+++++.. .++.++.+...++++++..+.....++++..+++....... ......+.+.++++.++..++.+++.+..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (686)
T TIGR03797 123 LRDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD--RSLLVQIALALLAAAVGAAAFQLAQSLAV 200 (686)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344433 34566666666666666666666677777777776542211 11223344555566667778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 040099 754 AVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQL 833 (1236)
Q Consensus 754 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l 833 (1236)
...+.++..++|.++|++++++|++||+ .+++|++++|++ |++.+++++...+...+......++.++++++++|.+
T Consensus 201 ~~~~~~~~~~l~~~~~~~ll~~~~~~~~--~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 277 (686)
T TIGR03797 201 LRLETRMDASLQAAVWDRLLRLPVSFFR--QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKL 277 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHC--CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 488999999997 7999999988887777777777788888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040099 834 ALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLM 913 (1236)
Q Consensus 834 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1236)
++++++++|+.+++..+..+..++..++..+..++..+.+.|+++|+++||+++.++++.++|.+..++..+...+....
T Consensus 278 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 357 (686)
T TIGR03797 278 ALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRI 357 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888888999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 040099 914 SGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSK 993 (1236)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 993 (1236)
..+...+...+..+..++++++|++++..|.+|+|+++++..+...+..|+..+...+..++.+..+.+|+.++++.+++
T Consensus 358 ~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 437 (686)
T TIGR03797 358 ENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPE 437 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999986654
Q ss_pred cCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEEC
Q 040099 994 IDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLD 1073 (1236)
Q Consensus 994 ~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~id 1073 (1236)
.+... ..++...|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 438 ~~~~~---~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 513 (686)
T TIGR03797 438 VDEAK---TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYD 513 (686)
T ss_pred cccCc---CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEEC
Confidence 32211 1122345789999999999754 3579999999999999999999999999999999999999999999999
Q ss_pred CeecccCChHHHhcceEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhH
Q 040099 1074 GVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQ 1139 (1236)
Q Consensus 1074 G~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQ 1139 (1236)
|+|+++++++++|++|+||||||++|+|||||||. +.++++++++++|+||||.+||+|.+|||||
T Consensus 514 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQ 593 (686)
T TIGR03797 514 GQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQ 593 (686)
T ss_pred CEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHH
Confidence 99999999999999999999999999999999994 6788999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHH
Q 040099 1140 KQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1140 rQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
||||+||||++++|+|||||||||+||++||+.+++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||
T Consensus 594 rQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~L 671 (686)
T TIGR03797 594 RQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDEL 671 (686)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999986 6899999999999999999999999999999999999
Q ss_pred hhccCcccHHhhhcc
Q 040099 1220 ISTKNGIYTSLIEPH 1234 (1236)
Q Consensus 1220 l~~~~g~y~~L~~~q 1234 (1236)
+++ +|.|++|++.|
T Consensus 672 l~~-~~~y~~l~~~q 685 (686)
T TIGR03797 672 MAR-EGLFAQLARRQ 685 (686)
T ss_pred HhC-CcHHHHHHHhc
Confidence 996 89999999876
No 39
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.4e-80 Score=767.74 Aligned_cols=524 Identities=23% Similarity=0.300 Sum_probs=469.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 62 MLVGTIAATGNGLCVPFVALLFGDLMDSIG-QNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIR 140 (1236)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 140 (1236)
+.++++++++.+++.+..|+++++++|.+. ...+. ..+..+...+++++++..++.+++.++..+++.++..++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEPL----AELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777778888889999999999863 32111 2233344455566677788899999999999999999999
Q ss_pred HHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 040099 141 SFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVI 220 (1236)
Q Consensus 141 ~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~ 220 (1236)
.++|+|++++|..+|++. ++|++++|+++|++.+++++...+..++..++.+++.++++++++|.+++++++.+|+.++
T Consensus 81 ~~l~~~l~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 040099 221 AGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIF 300 (1236)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1236)
+..++.++.++..++.++..+++.+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999999999998888888887777777777777
Q ss_pred HHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCC
Q 040099 301 SAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDD 380 (1236)
Q Consensus 301 ~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 380 (1236)
+..++++.+|++.+.+|.+|+|.+++++.+......|+..+...+..++++..+++|+.++++.+++..+.. ..+ ..
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~--~~~-~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA--PVT-AA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc--CCC-CC
Confidence 777666677788888999999999999999988899999999999999999999999999998554322111 111 11
Q ss_pred CCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHh
Q 040099 381 IRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIR 460 (1236)
Q Consensus 381 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 460 (1236)
..+.|+++||+|+||++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23579999999999853 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 040099 461 EKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIK 540 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~ 540 (1236)
++|+||+|+|++|++||+|||.++.+++++++++++++.+++++|++++|+||||.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEE
Q 040099 541 DPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVI 594 (1236)
Q Consensus 541 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl 594 (1236)
+|+|+|||||||+||+++++.+.+.+.++.+++|+|+||||+++++.||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999986
No 40
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-80 Score=792.05 Aligned_cols=550 Identities=25% Similarity=0.340 Sum_probs=483.9
Q ss_pred hhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 674 SLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCF 753 (1236)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 753 (1236)
.+++++.+.++.++.+...++++++..++....++++..+++....... ......+...++++.++..++.+++.++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 143 SLLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM--MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555666666677777766666777777777777788888876543211 11122333444455566778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 040099 754 AVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQL 833 (1236)
Q Consensus 754 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l 833 (1236)
.+.+.++..++|.++|++++++|++||+ ++++|++++|++ |.+.+.+++...+...+..+..+++.++++++++|.+
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~--~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFS--TRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999998 488999999998 8999999888887777778888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040099 834 ALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLM 913 (1236)
Q Consensus 834 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1236)
++++++.+|+++++.++..+..++..++..+..++..+.+.|+++|+++||+|+.++++.++|.+...+..+...+....
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888888888899999999999999999999999999999999999998888888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 040099 914 SGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSK 993 (1236)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 993 (1236)
......+..++..+..++++++|++++..|.+|+|+++++..+...+..|+..+...+..++.+..+.+|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 77777777777778888899999999999999999999999999999999999999999999999999999999987655
Q ss_pred cCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEEC
Q 040099 994 IDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLD 1073 (1236)
Q Consensus 994 ~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~id 1073 (1236)
.+..... ...+...|.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++|
T Consensus 458 ~~~~~~~-~~~~~~~~~I~~~~vsf~y~~~--~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~id 534 (708)
T TIGR01193 458 FINKKKR-TELNNLNGDIVINDVSYSYGYG--SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLN 534 (708)
T ss_pred ccccccc-cCCCCCCCcEEEEEEEEEcCCC--CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEEC
Confidence 4322110 1123346789999999999743 469999999999999999999999999999999999999999999999
Q ss_pred CeecccCChHHHhcceEEEcCCCCCChhhHHHHHH----------------HHhhhchHHHhhhhchhhhhcCCCCCCCh
Q 040099 1074 GVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA----------------EMANANGFISGLQEGYDTLVGERGVQLSG 1137 (1236)
Q Consensus 1074 G~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~----------------~~a~~~~~i~~lp~Gldt~vge~G~~LSG 1137 (1236)
|+|+++++.+++|++|+||||||+||+|||||||. +.+++++++.++|+||||.+||+|.+|||
T Consensus 535 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSg 614 (708)
T TIGR01193 535 GFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISG 614 (708)
T ss_pred CEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCH
Confidence 99999999999999999999999999999999994 56788999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChh
Q 040099 1138 GQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHE 1217 (1236)
Q Consensus 1138 GQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~ 1217 (1236)
||||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||+++++.||+|+||++|+++|.|+|+
T Consensus 615 GQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~ 693 (708)
T TIGR01193 615 GQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHD 693 (708)
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999999999999985 789999999999999999999999999999999999
Q ss_pred HHhhccCcccHHhhhc
Q 040099 1218 SLISTKNGIYTSLIEP 1233 (1236)
Q Consensus 1218 eLl~~~~g~y~~L~~~ 1233 (1236)
||+++ +|.|++|+++
T Consensus 694 ~L~~~-~~~y~~l~~~ 708 (708)
T TIGR01193 694 ELLDR-NGFYASLIHN 708 (708)
T ss_pred HHHhc-CCcHHHHhhC
Confidence 99996 8999999853
No 41
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-80 Score=701.03 Aligned_cols=555 Identities=23% Similarity=0.298 Sum_probs=471.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 59 SVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAAR 138 (1236)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1236)
+..+.++++++++..+....+..+-|++|..-.-. ..... -.+...+..+=++++.+.+..|...+..+....++..+
T Consensus 15 ~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAia-g~~~~-f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~ 92 (573)
T COG4987 15 KFGLLLGIVLAILTLLASIGLLTLSGWFISASAIA-GLAYI-FNVMLPSAGVRGLAILRTAARYVERLVSHDATFRVLSA 92 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhc-cHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33556666666655554444445567777642111 11001 11122233344667788899999999999999999999
Q ss_pred HHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HHH
Q 040099 139 IRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSS-IPP 217 (1236)
Q Consensus 139 lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~-~p~ 217 (1236)
+|.++|+++...+..-..+. ++||+++|++.|++.+++.+-..+.+.+..++...+..+.+-+++|.+++.+... +.+
T Consensus 93 lRv~~f~kl~p~sp~~~~r~-r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~~ 171 (573)
T COG4987 93 LRVRLFEKLEPLSPALLLRY-RSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLILLLL 171 (573)
T ss_pred HHHHHHHhhccCChHHHHhc-ChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999988 9999999999999999999999999999998888888888888999988765544 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 040099 218 LVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVF 297 (1236)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1236)
.+++...+.++.++..++..+..+.+.+.+.|.+.|....+.||+++.+.+.+.+.-..+.+...|..++..+...+..+
T Consensus 172 lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l 251 (573)
T COG4987 172 LLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILLL 251 (573)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677888888999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCccccccCCC
Q 040099 298 IIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQAS-PCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGK 376 (1236)
Q Consensus 298 ~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~ 376 (1236)
+..+..+..+.+.+..+-.|..+......+++.++..+.++..+. ..+....+...|+.|+.++++.+|+...+. + .
T Consensus 252 ~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~-~-~ 329 (573)
T COG4987 252 IAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFPD-E-Q 329 (573)
T ss_pred HHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCCc-c-c
Confidence 777776634444444566777764444444444444455555555 556788999999999999999988765431 1 1
Q ss_pred CCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH
Q 040099 377 KLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL 456 (1236)
Q Consensus 377 ~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~ 456 (1236)
.+.....++++||||+||+. +.++|+|+||++++||++||+|+||||||||+++|.|-|+|++|+|.++|.++..++.
T Consensus 330 -~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~ 407 (573)
T COG4987 330 -TATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDE 407 (573)
T ss_pred -cCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCCh
Confidence 11112279999999999964 4689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
+.+|+.|++++|.++||++|+|||+.+++|++++|+++++++++++++++.+.|+||+|.+||.|..||||||||+||||
T Consensus 408 ~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR 487 (573)
T COG4987 408 QALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALAR 487 (573)
T ss_pred hhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchh
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAY 616 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y 616 (1236)
+|++|+|++||||||.+||+.||+++++.|.+..+|||+|+||||+..++.||||+||++|+++|+|+|.+|+++ +|.|
T Consensus 488 ~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~-~g~~ 566 (573)
T COG4987 488 ALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLAN-NGRY 566 (573)
T ss_pred HHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhcc-ccHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997 8999
Q ss_pred hhhHH
Q 040099 617 NRLIR 621 (1236)
Q Consensus 617 ~~~~~ 621 (1236)
+++++
T Consensus 567 ~~l~q 571 (573)
T COG4987 567 KRLYQ 571 (573)
T ss_pred HHHhc
Confidence 99875
No 42
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.6e-80 Score=765.76 Aligned_cols=550 Identities=23% Similarity=0.287 Sum_probs=473.4
Q ss_pred HHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhH-HhhhHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 040099 676 SRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEE-LMRHSKH-WALMFVALGAASLLTSPLSMYCF 753 (1236)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~ 753 (1236)
++++++.+++++.++++++++++...+....+++++++++........ ....... +...+.+++++..++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 5 LPFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677777777887777777777777777777777754211110 0000011 12233345556777888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 040099 754 AVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQL 833 (1236)
Q Consensus 754 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l 833 (1236)
...+.+...++|.++|++++++|.+||+ ++++|++++|+++|++.++.++...+..++.+++.+++.++++++++|.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 162 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLA--RYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTL 162 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHH
Q 040099 834 ALLVLAIFPLLGI-TGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGL 912 (1236)
Q Consensus 834 ~lv~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1236)
++++++.+|++++ ..++..+..++..++.++..++..+.+.|.++|+++||+|+.++++.++|.+..++..+...+...
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 242 (574)
T PRK11160 163 ALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQAN 242 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888887655 446666777777788888888999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 040099 913 MSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSM-TAIGISQTSSLASDASKAKSSAASVFGLIDQV 991 (1236)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 991 (1236)
..+....+..++..+..++++++|++++ .|.++.|.+++++.+..+ ...++..+...+..+.++..+++|+.++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~ 321 (574)
T PRK11160 243 LTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQK 321 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8888888888888888888899999885 788999998887766544 44577788888999999999999999999876
Q ss_pred cccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEE
Q 040099 992 SKIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHIT 1071 (1236)
Q Consensus 992 ~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~ 1071 (1236)
++.+..+. .......+.|+|+||+|+|++. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+
T Consensus 322 ~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~ 398 (574)
T PRK11160 322 PEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEIL 398 (574)
T ss_pred CCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 54322111 1112235689999999999854 24699999999999999999999999999999999999999999999
Q ss_pred ECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCC
Q 040099 1072 LDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLS 1136 (1236)
Q Consensus 1072 idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LS 1136 (1236)
+||+|+++++.+++|++|+||||||+||++||+|||. +.+++++++++ |+||||.+||+|.+||
T Consensus 399 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LS 477 (574)
T PRK11160 399 LNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLS 477 (574)
T ss_pred ECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCC
Confidence 9999999999999999999999999999999999994 67889999999 9999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecCh
Q 040099 1137 GGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSH 1216 (1236)
Q Consensus 1137 GGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~ 1216 (1236)
||||||||||||++++|+|||||||||+||++||+.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 478 gGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 478 GGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhccCcccHHhhhc
Q 040099 1217 ESLISTKNGIYTSLIEP 1233 (1236)
Q Consensus 1217 ~eLl~~~~g~y~~L~~~ 1233 (1236)
+||+++ +|.|++|++.
T Consensus 558 ~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 558 QELLAQ-QGRYYQLKQR 573 (574)
T ss_pred HHHHhc-CcHHHHHHhh
Confidence 999997 9999999863
No 43
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.3e-80 Score=789.24 Aligned_cols=549 Identities=24% Similarity=0.313 Sum_probs=481.6
Q ss_pred hhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 674 SLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCF 753 (1236)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 753 (1236)
.+++++...+++++.+...++++++..+.....+++...+++....... ......+...++++.++..++.+++.++.
T Consensus 141 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (710)
T TIGR03796 141 LLRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR--QDWLRPLLLGMGLTALLQGVLTWLQLYYL 218 (710)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555666666666666666666666666777777765432211 11122334445555666778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 040099 754 AVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQL 833 (1236)
Q Consensus 754 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l 833 (1236)
...+.++..++|.++|++++++|++||+ ++++|++++|+++| +.+++++...+..++..++.+++.++++++++|.+
T Consensus 219 ~~~~~~~~~~l~~~~~~~ll~l~~~~~~--~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 295 (710)
T TIGR03796 219 RRLQIKLAVGMSARFLWHILRLPVRFFA--QRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVL 295 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 48899999999988 68999998888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040099 834 ALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLM 913 (1236)
Q Consensus 834 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1236)
++++++.+|+.+++..+..+...+..++..+...+..+.+.|+++|+++||+++.++.+.++|.+...+..+...+....
T Consensus 296 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 375 (710)
T TIGR03796 296 TLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVL 375 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888888878888888888999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 040099 914 SGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSK 993 (1236)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 993 (1236)
..+...+..++..+..++++++|++++..|.+++|.++++..+...+..|+..+...+..+..+..+.+|+.++++.+++
T Consensus 376 ~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e 455 (710)
T TIGR03796 376 TQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVD 455 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888888888888899999999999999999999999999999999999999999999999999999999999987655
Q ss_pred cCCCcc---c-cCcc-CCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCc
Q 040099 994 IDSSEY---T-GRTL-ENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSG 1068 (1236)
Q Consensus 994 ~~~~~~---~-~~~~-~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G 1068 (1236)
.+.... . ...+ +...|.|+|+||+|+|++. ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 456 PLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred cccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 432210 0 0111 2345789999999999854 34699999999999999999999999999999999999999999
Q ss_pred EEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCC
Q 040099 1069 HITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGV 1133 (1236)
Q Consensus 1069 ~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~ 1133 (1236)
+|++||+|+++++.+++|++|+||||||++|+|||||||. +.+++++++.++|+||||.+||+|.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 9999999999999999999999999999999999999994 6788999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 040099 1134 QLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEK 1213 (1236)
Q Consensus 1134 ~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~ 1213 (1236)
+||||||||||||||++++|+|||||||||+||++||+.+.+.|++ .++|+|+||||+++++.||+|+||++|+|+|.
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~ 692 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQR 692 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999999999999987 48999999999999999999999999999999
Q ss_pred cChhHHhhccCcccHHhh
Q 040099 1214 GSHESLISTKNGIYTSLI 1231 (1236)
Q Consensus 1214 Gt~~eLl~~~~g~y~~L~ 1231 (1236)
|+|+||+++ +|.|++|+
T Consensus 693 G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 693 GTHEELWAV-GGAYARLI 709 (710)
T ss_pred cCHHHHHHc-CCcHHHHh
Confidence 999999996 89999987
No 44
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.5e-80 Score=829.90 Aligned_cols=567 Identities=20% Similarity=0.252 Sum_probs=471.0
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 45 IPFHKLLSFADLLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQ 124 (1236)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1236)
..+..++.|++...+...++.+++.++..++..+.++.++...|......+. .....+...+++++++..++.++.
T Consensus 950 v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~----~~~~~~~~iy~~l~i~~~~~~~~~ 1025 (1522)
T TIGR00957 950 VELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQ----NNTSLRLSVYGALGILQGFAVFGY 1025 (1522)
T ss_pred ccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC----CCcchHHHHHHHHHHHHHHHHHHH
Confidence 3455555666543222222222233333344445556667666642111010 001112234555666777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 125 VACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKG 204 (1236)
Q Consensus 125 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1236)
.++....+.+...++|.++|++++++|++||+++ ++|++++|+++|++.+++.+...+..++..++.+++.++++++.+
T Consensus 1026 ~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~ 1104 (1522)
T TIGR00957 1026 SMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLAT 1104 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 040099 205 WLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQE 284 (1236)
Q Consensus 205 ~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 284 (1236)
|.++++++.++++++++..++.+..++..+...+..+.+.+.+.|+++|+++||+|++|+.+.+++.+..+...+.....
T Consensus 1105 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~ 1184 (1522)
T TIGR00957 1105 PIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPS 1184 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 98877777666766677777777777777778888899999999999999999999999999999988888777776655
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH-hcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 285 GLATGLGLGASVFIIFSAYGLGVWYGAKLIL-EKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAIN 363 (1236)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~-~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 363 (1236)
.....+......++.. +++++.|+..+. .|.+++|.+.+++.|++....|+..+...+..++++.+|.+|+.++++
T Consensus 1185 ~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~ 1261 (1522)
T TIGR00957 1185 IVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSE 1261 (1522)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5555555544444332 234445555554 588999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccCCCCC--CCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCC
Q 040099 364 RKPEIDLCCVNGKKL--DDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQA 441 (1236)
Q Consensus 364 ~~~~~~~~~~~~~~~--~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 441 (1236)
.+++.+.......++ .+.+|.|+|+||+|+|+++ .+++|+||||+|+|||++||||+||||||||+++|.|+|+|++
T Consensus 1262 ~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~ 1340 (1522)
T TIGR00957 1262 TEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAE 1340 (1522)
T ss_pred CCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCC
Confidence 776643111111111 1346789999999999753 2479999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCC
Q 040099 442 GEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHG 521 (1236)
Q Consensus 442 G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g 521 (1236)
|+|++||+|+++++.+++|++|+||||||+||+|||||||.... +++++++++|++.+++++++.++|+||||.+||+|
T Consensus 1341 G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1419 (1522)
T TIGR00957 1341 GEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGG 1419 (1522)
T ss_pred CeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCC
Confidence 99999999999999999999999999999999999999998432 57999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEE
Q 040099 522 IQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVE 601 (1236)
Q Consensus 522 ~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~ 601 (1236)
.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||||+||++|+|+|
T Consensus 1420 ~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE 1499 (1522)
T TIGR00957 1420 ENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAE 1499 (1522)
T ss_pred CcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred EeCcccccccccchhhhhHHh
Q 040099 602 KGTHSELLENPYGAYNRLIRL 622 (1236)
Q Consensus 602 ~g~~~~l~~~~~~~y~~~~~~ 622 (1236)
.|+|+||+++ ++.|+++++.
T Consensus 1500 ~G~~~eLl~~-~~~f~~l~~~ 1519 (1522)
T TIGR00957 1500 FGAPSNLLQQ-RGIFYSMAKD 1519 (1522)
T ss_pred ECCHHHHHhC-CCHHHHHHHH
Confidence 9999999988 7999999864
No 45
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-79 Score=708.94 Aligned_cols=536 Identities=26% Similarity=0.363 Sum_probs=476.3
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 692 GAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEK 771 (1236)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 771 (1236)
..+.+.+.++....+.++++..+..+..... ......++..++++.+...++.+.+......++.++-..+|..++++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~--~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL--FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666666777777777766543221 23334455666666777788888888888999999999999999999
Q ss_pred HhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 040099 772 VVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQ 851 (1236)
Q Consensus 772 ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~ 851 (1236)
+.+.+..|-. ..++|+..+.+...++.++.++...++.+.......+..++..++.+|.-+++++.+.|++.++.++.
T Consensus 83 l~~~gp~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 83 LAKLGPAFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHhCChhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987 47899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 852 MKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAV 931 (1236)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1236)
....++.+++.-..+...++++.|.++|+.|+|.|+..++..++..+...+..+..++..++.-...++..++.+++.++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888889999999999999999999999999999999999999999999998888888888888888888887
Q ss_pred HHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCcccc
Q 040099 932 TFYVGAKLVDH-KQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGE 1010 (1236)
Q Consensus 932 ~~~~g~~lv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 1010 (1236)
+..+.+..... |.+++...+.++....-.+.|+..+.+.++....+..+++.++.+.+.+.+................+
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~e 320 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIE 320 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCce
Confidence 66555544444 89999998888888889999999999999999999999999999998776544332211111122345
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++.+|++|+||+.+ ++++|+||+++|||++||||+||||||||+++|+||++|++|+|++||+|.++++.+.||++++
T Consensus 321 i~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 321 ISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred eeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 66779999999753 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
+|||+|+||+|||||||. +.+++.+|+.. |+|+||++||+|.+|||||+||+++|||+++++++
T Consensus 399 ~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l 477 (559)
T COG4988 399 WVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASL 477 (559)
T ss_pred eeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCE
Confidence 999999999999999994 67888999999 99999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhccC
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q~ 1235 (1236)
+|+|||||+||.+||+.|++.|.++++++|||+||||++.+++||+|+|||+|+++|.|+|++|.++ +|.|++|+..|.
T Consensus 478 ~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~ 556 (559)
T COG4988 478 LLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQE 556 (559)
T ss_pred EEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 999999998764
No 46
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.7e-79 Score=754.92 Aligned_cols=533 Identities=21% Similarity=0.276 Sum_probs=468.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 62 MLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRS 141 (1236)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 141 (1236)
++..++++++..++....|+++++++|.+....+. ..+..+...++++.++..++.+++.++..+.+.++..++|.
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 83 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSV----PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQ 83 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666677777888999999976532121 22333344445555667788899999999999999999999
Q ss_pred HHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 040099 142 FYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGE-KVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVI 220 (1236)
Q Consensus 142 ~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~ 220 (1236)
++|+|++++|+. ..++..+++++|++.+++++.. .+..++..++.++ .++++++++|.+++++++.+|++++
T Consensus 84 ~~~~~ll~~~~~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~ 156 (544)
T TIGR01842 84 PIFAASFSATLR------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVG 156 (544)
T ss_pred HHHHHHhcCccc------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999983 3466789999999999999877 4555555555444 4567899999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 040099 221 AGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIF 300 (1236)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1236)
+..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+....+..++..
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (544)
T TIGR01842 157 LALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI 236 (544)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999999999999999999999998888888888887777777777
Q ss_pred HHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCC
Q 040099 301 SAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDD 380 (1236)
Q Consensus 301 ~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 380 (1236)
+..++++++|++++.+|.+|+|++++++.++.....|+..+...+..++++.++.+|+.++++.+++.+.. ...+.
T Consensus 237 ~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~ 312 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPLPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCCCC
Confidence 78888899999999999999999999999999999999999999999999999999999999876553211 11222
Q ss_pred CCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHh
Q 040099 381 IRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIR 460 (1236)
Q Consensus 381 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 460 (1236)
..+.++++||+|+|+++ ++++|+|+||+++|||+++||||||||||||+++|+|+|+|++|+|.+||+++++++.+++|
T Consensus 313 ~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~ 391 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFG 391 (544)
T ss_pred CCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHh
Confidence 34679999999999743 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 040099 461 EKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIK 540 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~ 540 (1236)
++++||||+|++|++|++|||.++.+++++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||+++
T Consensus 392 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~ 471 (544)
T TIGR01842 392 KHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYG 471 (544)
T ss_pred hheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998877789999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccc
Q 040099 541 DPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 541 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
+|++||||||||+||+++++.+.+.|.++. +++|+|+||||++.++.||+|++|++|++++.|+|+++++
T Consensus 472 ~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 472 DPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999999999999885 5899999999999999999999999999999999999875
No 47
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-82 Score=697.10 Aligned_cols=487 Identities=31% Similarity=0.416 Sum_probs=418.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 742 SLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVV 821 (1236)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~ 821 (1236)
++++..++.|+...+.....+++-.++|+|+..+++.|+- .+.+|+++.-+.+..+.+. ++...+..+...+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL--~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHL--NRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeee--cccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 3566777888888889999999999999999999999987 4779998887777766665 444444444444444444
Q ss_pred HHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHH
Q 040099 822 GLVI-AFKACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKC 900 (1236)
Q Consensus 822 ~~ii-~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~ 900 (1236)
+.+. ....+|+++++++.+..+.........-...++.++......+..+.-.|++-|.+|||-|++|++..++|.+..
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 4443 345789999988887777665544443344445666777777788888999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 901 EGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSS 980 (1236)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 980 (1236)
.++++..++...--.+.......+..++.+....+.++.|..+..++|+.+.+..++....+|+.....+...+++....
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99998877765544444444445555555555566677788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHh
Q 040099 981 AASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQ 1060 (1236)
Q Consensus 981 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1060 (1236)
+++++++++++++..+.+ ...+....+|.|+|+||+|.|.+ .+|+|+||||+++||+++|+|||||+||||++++|+
T Consensus 509 mEnmfdllkee~eVvd~P-~a~pl~~~~G~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLf 585 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDLP-GAPPLKVTQGKIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLF 585 (790)
T ss_pred HHHHHHHhhcCchhhcCC-CCCCccccCCeEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHH
Confidence 999999998877664322 22233446799999999999974 568999999999999999999999999999999999
Q ss_pred cccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchh
Q 040099 1061 RFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYD 1125 (1236)
Q Consensus 1061 r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gld 1125 (1236)
||||.++|+|+|||+||+.+..++||++||+||||.+||++||.+||. +.|++||-|.++|+||+
T Consensus 586 Rffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~ 665 (790)
T KOG0056|consen 586 RFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYN 665 (790)
T ss_pred HHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhh
Confidence 999999999999999999999999999999999999999999999994 78899999999999999
Q ss_pred hhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEE
Q 040099 1126 TLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVV 1205 (1236)
Q Consensus 1126 t~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl 1205 (1236)
|.|||+|..||||||||+||||++|++|.|++|||||||||..||++||.+|.+.+.+||.|+|||||+|+-+||.|+|+
T Consensus 666 t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi 745 (790)
T KOG0056|consen 666 TRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVI 745 (790)
T ss_pred hhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCEEEEecChhHHhhccCcccHHhhhcc
Q 040099 1206 SQGMIVEKGSHESLISTKNGIYTSLIEPH 1234 (1236)
Q Consensus 1206 ~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q 1234 (1236)
++|+|+|.|+|+||+++.+|.|+.||+.|
T Consensus 746 ~~G~IvErG~HeeLl~rdgG~Ya~MWq~q 774 (790)
T KOG0056|consen 746 SNGRIVERGRHEELLKRDGGAYADMWQAQ 774 (790)
T ss_pred eCCeEeecCcHHHHHhccCCcHHHHHHHH
Confidence 99999999999999999899999999755
No 48
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.5e-79 Score=774.71 Aligned_cols=540 Identities=25% Similarity=0.374 Sum_probs=475.0
Q ss_pred hHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 675 LSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFA 754 (1236)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 754 (1236)
+++++.+.++.++.+...++++++..++....++++..+++....... ......+...++++.++..++.+++.++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA--FETLWVLAIGVALAIVFDFVLKTLRSYFLD 212 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555666666666666666666666677777777776542211 111222333444455567788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 040099 755 VAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLA 834 (1236)
Q Consensus 755 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~ 834 (1236)
+.+.++..++|.++|++++++|++| + ++++|++++|+ +|++.+++++...+...+..+..+++.++++++++|.++
T Consensus 213 ~~~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 288 (694)
T TIGR03375 213 VAGKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLV 288 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999998 4 47899999999 899999999988888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040099 835 LLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMS 914 (1236)
Q Consensus 835 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1236)
+++++.+|+.+++.++..++.++..++..+..++..+.+.|+++|+++||+|+.++++.++|.+..++..+...+.....
T Consensus 289 li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (694)
T TIGR03375 289 WVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLS 368 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888888888999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 040099 915 GIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKI 994 (1236)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 994 (1236)
.....+...+..++.++++++|++++..|.+|+|+++++..+...+..|+..+...+.++..+..+.+|+.++++.+++.
T Consensus 369 ~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~ 448 (694)
T TIGR03375 369 NLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVER 448 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 88888888888888889999999999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECC
Q 040099 995 DSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDG 1074 (1236)
Q Consensus 995 ~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG 1074 (1236)
+.... ....+...|.|+|+||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 449 ~~~~~-~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 526 (694)
T TIGR03375 449 PEGTR-FLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDG 526 (694)
T ss_pred CCCCC-CCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 22111 11122345789999999999854 34699999999999999999999999999999999999999999999999
Q ss_pred eecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhH
Q 040099 1075 VEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQ 1139 (1236)
Q Consensus 1075 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQ 1139 (1236)
+|+++++++++|++|+||||||++|+|||+|||. +.+++++++.++|+||||.+||+|.+|||||
T Consensus 527 ~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 527 VDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred EEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 9999999999999999999999999999999994 6688999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHH
Q 040099 1140 KQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1140 rQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
||||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+|+|.|+|+||
T Consensus 607 rQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 607 RQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred hhc
Q 040099 1220 IST 1222 (1236)
Q Consensus 1220 l~~ 1222 (1236)
+++
T Consensus 687 l~~ 689 (694)
T TIGR03375 687 LEA 689 (694)
T ss_pred HHH
Confidence 886
No 49
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=7.8e-79 Score=761.33 Aligned_cols=550 Identities=33% Similarity=0.502 Sum_probs=478.3
Q ss_pred HHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 677 RLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVA 756 (1236)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 756 (1236)
+++.+.++.++.++..+++.++..++....++++..+++....... ......+...++++.++..++.+++.++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 92 (582)
T PRK11176 15 RLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD--RSVLKWMPLVVIGLMILRGITSFISSYCISWV 92 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555555555555666666654432111 11111122333445666777788888888899
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 040099 757 GCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALL 836 (1236)
Q Consensus 757 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv 836 (1236)
+.+...++|..+|+++++.|.++|+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++++
T Consensus 93 ~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 170 (582)
T PRK11176 93 SGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLI 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 47899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040099 837 VLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGI 916 (1236)
Q Consensus 837 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1236)
+++.+|+.++...+..+..++..++.++...+....+.|.++|+++||+|+.++++.++|.+..++..+...+.......
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T PRK11176 171 LIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888888888888888888888999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Q 040099 917 GFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDS 996 (1236)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 996 (1236)
...+...+..++.++++++|++++..|.+++|++++++.+...+..|+..+...+..++.+..+.+|+.++++.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 330 (582)
T PRK11176 251 SDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDE 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC
Confidence 88888888888888889999999999999999999999999889999999999999999999999999999876543221
Q ss_pred CccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCee
Q 040099 997 SEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVE 1076 (1236)
Q Consensus 997 ~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~d 1076 (1236)
.. ...++..+.|+|+||+|+||+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|
T Consensus 331 ~~---~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~ 406 (582)
T PRK11176 331 GK---RVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHD 406 (582)
T ss_pred CC---cCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEE
Confidence 11 1122234679999999999864 3579999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHhcceEEEcCCCCCChhhHHHHHH----------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHH
Q 040099 1077 IQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA----------------EMANANGFISGLQEGYDTLVGERGVQLSGGQK 1140 (1236)
Q Consensus 1077 i~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~----------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQr 1140 (1236)
+++++.+++|++|+||||||++|+|||||||. +.++++++++++|+||||.+|++|.+||||||
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqr 486 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQR 486 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHH
Confidence 99999999999999999999999999999995 46788999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHh
Q 040099 1141 QRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1141 QRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
|||+|||||+++|+|||||||||+||++||+.+.++|.+..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|+
T Consensus 487 QRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~ 566 (582)
T PRK11176 487 QRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELL 566 (582)
T ss_pred HHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hccCcccHHhhhccC
Q 040099 1221 STKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1221 ~~~~g~y~~L~~~q~ 1235 (1236)
++ ++.|++|++.|.
T Consensus 567 ~~-~~~y~~l~~~~~ 580 (582)
T PRK11176 567 AQ-NGVYAQLHKMQF 580 (582)
T ss_pred hC-CChHHHHHHHHh
Confidence 97 899999998764
No 50
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-79 Score=694.40 Aligned_cols=527 Identities=28% Similarity=0.410 Sum_probs=454.9
Q ss_pred hHHHHHHHHHHHHHHHHhcC--chhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 040099 700 GIIIPIFGVMLAAMVNTLNE--PKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEV 777 (1236)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~ 777 (1236)
.+.....+.++...++.... ..+.........+..|.++.+.+.++.-++.+.+.++.+++.++.-.++|++.++++.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44455556666666665531 1111122233456778888888999999999999999999999999999999999999
Q ss_pred ccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 778 GWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGL-VIAFKACWQLALLVLAIFPLLGITGHIQMKSMK 856 (1236)
Q Consensus 778 ~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~-ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~ 856 (1236)
+||.+ ..+|.+.+.+.+-...+...+.-.+..++..++.+.... .+..-.....+++.+..+.....+.+.......
T Consensus 123 ~~~~~--~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 123 SFFLS--RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred HhhcC--CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 99984 679999999999999999888888877777766555544 334445666666666666666666666666667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 857 GFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVG 936 (1236)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 936 (1236)
++.++...+...+.+.+.|++.|.++||+||.|+++.++|+..+.++.++..+.+...++.......++....+.+++.|
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~ 280 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLG 280 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888889999999999999999999999999999999999999999999888887777776666677777778888888
Q ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEeEE
Q 040099 937 AKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRV 1016 (1236)
Q Consensus 937 ~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~V 1016 (1236)
..-+..+.+|+++++.+.........++..+...+.++.++..-+..++...+....++.. ..+.....+.|+|+||
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~---~~~i~~~~~~I~F~dV 357 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA---ALPIELFGGSIEFDDV 357 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc---cCCcccCCCcEEEEee
Confidence 8888999999999999999999999999999999999999999988888775543333221 1123345678999999
Q ss_pred EEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCC
Q 040099 1017 SFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEP 1096 (1236)
Q Consensus 1017 sf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp 1096 (1236)
+|.|++ ++++|+++||+|++||||||||+|||||||++++|+||+| ++|+|+|||+|+++++++.+|+.||+||||.
T Consensus 358 ~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~ 434 (591)
T KOG0057|consen 358 HFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDS 434 (591)
T ss_pred EEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcc
Confidence 999984 4569999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecC
Q 040099 1097 VLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEA 1161 (1236)
Q Consensus 1097 ~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEa 1161 (1236)
.||++||.+||. +.+++||.+.++|+||+|.|||+|..||||||||++||||+|+||||+++|||
T Consensus 435 ~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEa 514 (591)
T KOG0057|consen 435 VLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEA 514 (591)
T ss_pred cccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCc
Confidence 999999999993 88999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhccC
Q 040099 1162 TSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1162 TSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q~ 1235 (1236)
||+||.+||+.+.+++.....++|+|+|+||++++++||+|+|+++|+|+|.|+|+||++ +++.|+.+|..|.
T Consensus 515 TS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 515 TSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQT 587 (591)
T ss_pred ccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcccc
Confidence 999999999999999999889999999999999999999999999999999999999999 5999999998764
No 51
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.3e-78 Score=759.71 Aligned_cols=549 Identities=24% Similarity=0.335 Sum_probs=463.3
Q ss_pred HHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 676 SRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAV 755 (1236)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 755 (1236)
++++.+.++.++.+.+.++++++..+.....++++..+++...............+.++++++.++..++.+++.+....
T Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (592)
T PRK10790 12 KRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNR 91 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455566666677777777777777777888888876533211101111112233444455566777888888999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 040099 756 AGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLAL 835 (1236)
Q Consensus 756 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~l 835 (1236)
.+.+...++|.++|+++++.|.+||+ ++++|++++|+++|++.++..+...+..++..+..+++.++++++++|.+++
T Consensus 92 ~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 169 (592)
T PRK10790 92 AAVGVVQQLRTDVMDAALRQPLSAFD--TQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMAL 169 (592)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 4789999999999999999999999999999998888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040099 836 LVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSG 915 (1236)
Q Consensus 836 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1236)
++++++|++++...+..+..+...++..+...+...++.|.++|+++||+|+.++++.++|.+..++..+...+......
T Consensus 170 i~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (592)
T PRK10790 170 VAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDG 249 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999898887777777777777777777788889999999999999999999999999999988887777666555544
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 040099 916 IG-FGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKI 994 (1236)
Q Consensus 916 ~~-~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 994 (1236)
.. ..+...+..+...+++++++. +..|.+++|.++++..+...+..|+..+...+..++.+..+++|+.++++.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~ 328 (592)
T PRK10790 250 FLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQ 328 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 32 233333333332333333333 5789999999999999999999999999999999999999999999998765432
Q ss_pred CCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECC
Q 040099 995 DSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDG 1074 (1236)
Q Consensus 995 ~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG 1074 (1236)
.... ..+...++|+|+||+|+||+. .++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 329 ~~~~----~~~~~~~~i~~~~v~f~y~~~--~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg 402 (592)
T PRK10790 329 YGND----DRPLQSGRIDIDNVSFAYRDD--NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDG 402 (592)
T ss_pred CCCC----ccCCCCCeEEEEEEEEEeCCC--CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECC
Confidence 1111 112234689999999999843 4699999999999999999999999999999999999999999999999
Q ss_pred eecccCChHHHhcceEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHH
Q 040099 1075 VEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQK 1140 (1236)
Q Consensus 1075 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQr 1140 (1236)
+|+++++++++|++|+||||||.+|+|||||||. +.+++++++.++|+||||.+||+|.+||||||
T Consensus 403 ~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqr 482 (592)
T PRK10790 403 RPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQK 482 (592)
T ss_pred EEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHH
Confidence 9999999999999999999999999999999994 67889999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHh
Q 040099 1141 QRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1141 QRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
|||||||||+++|+|||||||||+||++||+.|++.|++..++||+|+||||+++++.||+|++|++|+++|.|+|+||+
T Consensus 483 QRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~ 562 (592)
T PRK10790 483 QLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLL 562 (592)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hccCcccHHhhhcc
Q 040099 1221 STKNGIYTSLIEPH 1234 (1236)
Q Consensus 1221 ~~~~g~y~~L~~~q 1234 (1236)
++ ++.|++|++.|
T Consensus 563 ~~-~~~y~~l~~~~ 575 (592)
T PRK10790 563 AA-QGRYWQMYQLQ 575 (592)
T ss_pred hC-CCHHHHHHHHH
Confidence 97 89999999865
No 52
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.7e-78 Score=814.27 Aligned_cols=565 Identities=21% Similarity=0.309 Sum_probs=435.7
Q ss_pred ccchHHHHHHhhchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHH
Q 040099 43 GRIPFHKLLSFADLLDS-VLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVAS 121 (1236)
Q Consensus 43 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1236)
+...+..++.|++.... +.+++.+++.++...+....++.++...|....... ....+...+++++++..++.
T Consensus 897 g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~------~~~~~~~i~~~l~~~~~i~~ 970 (1622)
T PLN03130 897 GVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTH------GPLFYNLIYALLSFGQVLVT 970 (1622)
T ss_pred CccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC------chhHHHHHHHHHHHHHHHHH
Confidence 34456666677654221 121222222223333333444555665554221111 01123344566667777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 122 FFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAF 201 (1236)
Q Consensus 122 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (1236)
+++.++..+.+.+...++|.++|++++++|++||+++ ++|++++|+++|++.+++.+...+..++..++.+++.+++++
T Consensus 971 ~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~ 1049 (1622)
T PLN03130 971 LLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIG 1049 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999 999999999999999999999999999999999999988888
Q ss_pred HHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 040099 202 FKGWLLTLTMLSSIPPLVI-AGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKS 280 (1236)
Q Consensus 202 ~~~~~l~l~~l~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~ 280 (1236)
+++|. .++++++++++++ +..++.+..++..+......+.+.+.+.|+++|+++||+|++++++.+++.+..+..
T Consensus 1050 ~~~~~-~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~--- 1125 (1622)
T PLN03130 1050 IVSTI-SLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNN--- 1125 (1622)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHH---
Confidence 88873 3333333333322 233444555566666667778899999999999999999999886666555544443
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHhcC---------cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 281 SVQEGLATGLGLGASVFIIFSAYGLGVWY-GAKLILEKG---------YSGGDVMSVIFGVLIGSMSLGQASPCLSAFAA 350 (1236)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~v~~g~---------~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 350 (1236)
.+..........+..+...+...+++++ |...+..+. .++|.++ .+.+....++..+......+++
T Consensus 1126 -~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~l---s~~~~~~~~l~~l~~~~~~~e~ 1201 (1622)
T PLN03130 1126 -IRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLL---SYALNITSLLTAVLRLASLAEN 1201 (1622)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333222222221111122222333 333344332 2334333 3444455566666777788899
Q ss_pred HHHHHHHHHHHhccCCCccccccCCCCC--CCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHH
Q 040099 351 GQAAAFKFFEAINRKPEIDLCCVNGKKL--DDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKST 428 (1236)
Q Consensus 351 ~~~s~~ri~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKST 428 (1236)
+.+|.+|+.++++.++|.+.......++ .+.+|.|+|+||+|+|+++ .++||+|+||+|+|||++||||||||||||
T Consensus 1202 ~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKST 1280 (1622)
T PLN03130 1202 SLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSS 1280 (1622)
T ss_pred HHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHH
Confidence 9999999999998876643211111111 1345789999999999642 347999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHh
Q 040099 429 VISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKN 508 (1236)
Q Consensus 429 l~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~ 508 (1236)
|+++|.|+|+|++|+|++||+|+++++.+++|++|+||||||.||+|||||||.+++ .++++++++|++.+++++|+.+
T Consensus 1281 Ll~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~ 1359 (1622)
T PLN03130 1281 MLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRR 1359 (1622)
T ss_pred HHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999987 4689999999999999999999
Q ss_pred CCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhc
Q 040099 509 LPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNA 588 (1236)
Q Consensus 509 l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~a 588 (1236)
+|+||||.+||+|.+|||||||||||||||+++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++.+|
T Consensus 1360 lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~ 1439 (1622)
T PLN03130 1360 NSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDC 1439 (1622)
T ss_pred CccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred CeEEEEECCEEEEEeCcccccccccchhhhhHHhhh
Q 040099 589 NIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 589 d~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~ 624 (1236)
|||+||++|+|+|.|+|+||+++++|.|+++++.+.
T Consensus 1440 DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1440 DRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred CEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 999999999999999999999876689999987654
No 53
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4e-78 Score=766.79 Aligned_cols=552 Identities=27% Similarity=0.410 Sum_probs=483.7
Q ss_pred hHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 675 LSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFA 754 (1236)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 754 (1236)
+++++...++.++.+...++++++..+.....++++..+++....... ......+...++++.++..++.+++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~--~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG--LSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445554445555555555555666555566667777777776542211 112233444555566667788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 040099 755 VAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLA 834 (1236)
Q Consensus 755 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~ 834 (1236)
..+.++..++|.++|++++++|++||+ ++++|++++|+ +|++.+++++...+...+..++..++.++++++++|.++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~--~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 281 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFE--SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLT 281 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcC--CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 48899999999 799999999988888877777777777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040099 835 LLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMS 914 (1236)
Q Consensus 835 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1236)
+++++++|+++++..+..+..++..++..+..++..+.+.|+++|+++||+||.++++.++|.+..++..+...+.....
T Consensus 282 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (694)
T TIGR01846 282 GVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLG 361 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888887777777777788889999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 040099 915 GIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKI 994 (1236)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 994 (1236)
.....+...+..+..++++++|++++..|.+|+|+++++..+...+..|+..+...+..++.+..+.+|+.++++.+++.
T Consensus 362 ~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~ 441 (694)
T TIGR01846 362 NIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEP 441 (694)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECC
Q 040099 995 DSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDG 1074 (1236)
Q Consensus 995 ~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG 1074 (1236)
+... ....+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|++||
T Consensus 442 ~~~~--~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 442 RSAG--LAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred cCCC--CCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 2211 11123345789999999999754 34699999999999999999999999999999999999999999999999
Q ss_pred eecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhH
Q 040099 1075 VEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQ 1139 (1236)
Q Consensus 1075 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQ 1139 (1236)
+|+++++.+++|++|+||||||++|++||||||. +.+++++++.++|+||||.+|++|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 9999999999999999999999999999999995 5678899999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHH
Q 040099 1140 KQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1140 rQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
|||++|||||+++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|+||
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hhccCcccHHhhhccC
Q 040099 1220 ISTKNGIYTSLIEPHT 1235 (1236)
Q Consensus 1220 l~~~~g~y~~L~~~q~ 1235 (1236)
+++ +|.|++|++.|.
T Consensus 679 ~~~-~~~y~~l~~~~~ 693 (694)
T TIGR01846 679 LAL-QGLYARLWQQQS 693 (694)
T ss_pred HHc-CChHHHHHHhhc
Confidence 996 899999998764
No 54
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-80 Score=678.58 Aligned_cols=492 Identities=31% Similarity=0.437 Sum_probs=446.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 040099 125 VACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIG-GFLIAFFK 203 (1236)
Q Consensus 125 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 203 (1236)
..++...++.....+-.+.|.|++++++.|+-++ .+|.+...+..-.+.|+..+...+...+..++-+.. +.++...+
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 3456777888888899999999999999999998 999999888888888888877777777766665443 44456678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 040099 204 GWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQ 283 (1236)
Q Consensus 204 ~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 283 (1236)
+|..++++++++.++.++.......-....++..++.++.++...+++-+..+||.|+.|+.+..+|++.++.+.+...|
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 99999999888888777666655555556677788889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 284 EGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAIN 363 (1236)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 363 (1236)
.....++....-..+...+...+...+...+..|.+|+|+++....++.+...|+..++..+..+.++..-.++.+++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 88877777777777777888888889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCC-CCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCc
Q 040099 364 RKPEIDLCCVNGKKLD-DIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAG 442 (1236)
Q Consensus 364 ~~~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 442 (1236)
.+.+..+.+ +.++.. ...|.+.|+||+|.|. +.+++|+++||++++|+++|+|||||+||||++++|.|||++++|
T Consensus 242 ~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 242 VEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred cchhhccCC-CCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 887765543 223333 3457899999999996 457899999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCC
Q 040099 443 EVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGI 522 (1236)
Q Consensus 443 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~ 522 (1236)
.|.+||+|+++...+++|+.||+||||..||++|+..||.||+|.++++|+..+++.+++++||..+|+||+|.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEE
Q 040099 523 QLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEK 602 (1236)
Q Consensus 523 ~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~ 602 (1236)
.||||||||+||||+++++|+||+|||+|||||.+||+.|+.+|++..+|+|+++|+|||+|+-+||.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcccccccccchhhhhHH
Q 040099 603 GTHSELLENPYGAYNRLIR 621 (1236)
Q Consensus 603 g~~~~l~~~~~~~y~~~~~ 621 (1236)
|+|+||++. +|.|++||.
T Consensus 479 g~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc-CChHHHHhc
Confidence 999999998 899999985
No 55
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.2e-77 Score=801.43 Aligned_cols=510 Identities=19% Similarity=0.231 Sum_probs=434.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 040099 112 YLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGA 191 (1236)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~ 191 (1236)
++.++..++.+++.+.....+.+...++|.++|++++++|+.||+++ ++|++++|+++|++.+.+.+...+..++..++
T Consensus 1006 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~ 1084 (1560)
T PTZ00243 1006 GIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQCLF 1084 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555555555666777788999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHH
Q 040099 192 SFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYN 271 (1236)
Q Consensus 192 ~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 271 (1236)
.+++.++++++.+|.+.++++.++.+++.+..++.+..++..+......+.+.+.+.|+++|+++||+|++|+.+.++|.
T Consensus 1085 ~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~ 1164 (1560)
T PTZ00243 1085 SICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEAL 1164 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHH
Confidence 99999999999998554443333333344455566667777777778888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--HhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 272 KCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVWYGAKLI--LEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFA 349 (1236)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~ 349 (1236)
+..+...+...+......+......++..+..+++.++|...+ ..+.+++|.+..++.+......|+..+...+..++
T Consensus 1165 ~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le 1244 (1560)
T PTZ00243 1165 RRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVE 1244 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888877776666666666666665555444444444433 34567899888888888888899999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcccc--------------------------ccCCC---CCCCCCCcEEEEeEEEECCCCCCC
Q 040099 350 AGQAAAFKFFEAINRKPEIDLC--------------------------CVNGK---KLDDIRGDIELKDVNFSYPARPDE 400 (1236)
Q Consensus 350 ~~~~s~~ri~~~l~~~~~~~~~--------------------------~~~~~---~~~~~~~~i~~~~v~f~y~~~~~~ 400 (1236)
++..|.+|++++++..|+.+.. ..... +.+...|.|+|+||+|+|+++ .+
T Consensus 1245 ~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~ 1323 (1560)
T PTZ00243 1245 ADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LP 1323 (1560)
T ss_pred HHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CC
Confidence 9999999999999754332100 00000 011234789999999999743 34
Q ss_pred ccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHH
Q 040099 401 QILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDN 480 (1236)
Q Consensus 401 ~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~n 480 (1236)
++|+||||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+||||||.||+||||||
T Consensus 1324 ~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreN 1403 (1560)
T PTZ00243 1324 LVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQN 1403 (1560)
T ss_pred ceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC-CCEEEEeCcCCCCCHHHH
Q 040099 481 IAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD-PRILLLDEATSALDSESG 559 (1236)
Q Consensus 481 i~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~-p~ililDE~ts~lD~~~~ 559 (1236)
|..+. +++++++++|++.+++++++.++|+||||.+||+|.+|||||||||||||||+++ |+|||||||||+||++|+
T Consensus 1404 Idp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te 1482 (1560)
T PTZ00243 1404 VDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALD 1482 (1560)
T ss_pred hCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHH
Confidence 98754 6789999999999999999999999999999999999999999999999999996 899999999999999999
Q ss_pred HHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHHhhh
Q 040099 560 RMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 560 ~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~ 624 (1236)
+.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++.+.
T Consensus 1483 ~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1483 RQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 99999999988899999999999999999999999999999999999999866799999987653
No 56
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.5e-77 Score=802.95 Aligned_cols=511 Identities=21% Similarity=0.291 Sum_probs=416.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHH
Q 040099 106 VSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGK 185 (1236)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 185 (1236)
+...+++++++..++.+++.++....+.+...++|.+++++++++|++||+++ ++|++++|+++|++.+++.+...+..
T Consensus 952 ~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~~~~ 1030 (1495)
T PLN03232 952 YIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANLMNM 1030 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHHHHH
Confidence 34455666777778889999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHH
Q 040099 186 FIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGV-VMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQ 264 (1236)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 264 (1236)
++..++.++++++++++++|.. ++++++++++++... ++.+..++..+......+.+.+.+.|+++|+++||+|+.++
T Consensus 1031 ~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~ 1109 (1495)
T PLN03232 1031 FMNQLWQLLSTFALIGTVSTIS-LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYD 1109 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHH
Confidence 9999988888888888877633 333333333332323 33344555666667778889999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHH-hcCc----ChhHHH-HHHHHHHHHHHH
Q 040099 265 QASSIYNKCLVKSYKSSVQEGLATGLGLGASVF-IIFSAYGLGVWYGAKLIL-EKGY----SGGDVM-SVIFGVLIGSMS 337 (1236)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~v~-~g~~----t~g~~~-~~~~~~~~~~~~ 337 (1236)
++.+++.+..+...+... .......+..+ +..++.+++++.|...+. .|.+ ..+.++ .++.+......|
T Consensus 1110 ~~~~~~~~~~~~~~~~~~----~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 1185 (1495)
T PLN03232 1110 RMAKINGKSMDNNIRFTL----ANTSSNRWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTL 1185 (1495)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 777666655544443332 22222221111 111222222333334443 2332 112222 244556666778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCC--CCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcE
Q 040099 338 LGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKL--DDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTI 415 (1236)
Q Consensus 338 l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~ 415 (1236)
+..+...+..++.+.+|.+|+.++++.++|.+.......++ .+.+|.|+|+||+|+|+++ .+++|+|+||+|+|||+
T Consensus 1186 l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~Gek 1264 (1495)
T PLN03232 1186 LSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEK 1264 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCE
Confidence 88888999999999999999999998876643211111111 2345789999999999632 35799999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHH
Q 040099 416 AALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQA 495 (1236)
Q Consensus 416 ~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~ 495 (1236)
+|||||||||||||+++|.|+|+|++|+|.+||+|+++++.+++|++|+||||||.||+|||||||.+++ +++++++++
T Consensus 1265 vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~ 1343 (1495)
T PLN03232 1265 VGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWE 1343 (1495)
T ss_pred EEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 579999999
Q ss_pred HHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceE
Q 040099 496 AAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTT 575 (1236)
Q Consensus 496 ~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~ 575 (1236)
|++.+++++++.++|+||||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+
T Consensus 1344 al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~Tv 1423 (1495)
T PLN03232 1344 ALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTM 1423 (1495)
T ss_pred HHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred EEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHHhhh
Q 040099 576 VIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQE 624 (1236)
Q Consensus 576 i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~ 624 (1236)
|+||||++++.+||+|+||++|+|+|.|+|+||++++++.|+++++.+.
T Consensus 1424 I~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~ 1472 (1495)
T PLN03232 1424 LVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTG 1472 (1495)
T ss_pred EEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999999999885569999987654
No 57
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.3e-77 Score=742.38 Aligned_cols=548 Identities=33% Similarity=0.507 Sum_probs=490.7
Q ss_pred HhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 678 LAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAG 757 (1236)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 757 (1236)
++.+.++.++.++++++++++.+++.+..++++..+++....... ......+...++++.++..++.+++.+...+.+
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD--RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVS 82 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445566777778888888888888888888777765433211 111222334556666777788888999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 040099 758 CKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLV 837 (1236)
Q Consensus 758 ~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~ 837 (1236)
.++..++|..+++++++.|.++|++ .++|++.+|+++|++.++.++...+..++..+..+++.++++++++|.+++++
T Consensus 83 ~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~ 160 (571)
T TIGR02203 83 NKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIV 160 (571)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999984 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 040099 838 LAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIG 917 (1236)
Q Consensus 838 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1236)
+++.|+.+++..+..+..++...+..+...+..+.+.|.++|+++||+++.++++.++|.+..++..+...+........
T Consensus 161 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (571)
T TIGR02203 161 VVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSIS 240 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888889999999999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 040099 918 FGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSS 997 (1236)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 997 (1236)
..+...+..+..++++++|++++..|.+++|.++++..+...+..|+..+......+..+..+.+|+.++++.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (571)
T TIGR02203 241 SPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG 320 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 88888888888999999999999999999999999999999999999999999999999999999999999765543221
Q ss_pred ccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeec
Q 040099 998 EYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEI 1077 (1236)
Q Consensus 998 ~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di 1077 (1236)
. ...++..+.|+++||+|+|+++ +.++|+|+||+|+|||+++|+|+||||||||+++|.|+|+|++|+|++||+|+
T Consensus 321 ~---~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i 396 (571)
T TIGR02203 321 T---RAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDL 396 (571)
T ss_pred C---CCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeH
Confidence 1 1112235689999999999864 34799999999999999999999999999999999999999999999999999
Q ss_pred ccCChHHHhcceEEEcCCCCCChhhHHHHHH----------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHH
Q 040099 1078 QKLQVKWLRQQMGVVSQEPVLFSDTIRANIA----------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQ 1141 (1236)
Q Consensus 1078 ~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~----------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQ 1141 (1236)
++++.+++|++++||||||++|+|||||||. +.+++++++.++|+|+||.+|++|.+|||||||
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQ 476 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQ 476 (571)
T ss_pred HhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHH
Confidence 9999999999999999999999999999984 467888999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhh
Q 040099 1142 RVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1142 RlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
|||||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 477 RiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 477 RLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred ccCcccHHhhhcc
Q 040099 1222 TKNGIYTSLIEPH 1234 (1236)
Q Consensus 1222 ~~~g~y~~L~~~q 1234 (1236)
+ ++.|+++++.|
T Consensus 557 ~-~~~~~~~~~~~ 568 (571)
T TIGR02203 557 R-NGLYAQLHNMQ 568 (571)
T ss_pred c-CCHHHHHHHHh
Confidence 7 78999988755
No 58
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.6e-77 Score=673.86 Aligned_cols=490 Identities=25% Similarity=0.326 Sum_probs=429.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 040099 737 ALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNT 816 (1236)
Q Consensus 737 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~ 816 (1236)
++++...+..+..-++.+.+..++...+|.++|+++...+..-.. ...+|+++||+..|++.+|+++-..+.+.+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 356677788888888999999999999999999999998888776 478999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHH
Q 040099 817 ATAVVGLVIAFKACWQLALLVLAIF-PLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKL 895 (1236)
Q Consensus 817 ~~~v~~~ii~~~~~~~l~lv~l~~~-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~ 895 (1236)
+...+..+...+++|.+++.+..++ .+++++.++..++-++..+......+...+++.|.+.|....+.||+++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 8887777777778888887766554 444566788888888888888889999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 040099 896 YKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTS-SLASDA 974 (1236)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 974 (1236)
+.+..+.+.+...+......+......++..+..+..+.+.+-.+..|..+......+.+.+.....++..+. ..+.+.
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999999999999999988888888887777777744444444566676665444444444444555555555 667889
Q ss_pred HHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHH
Q 040099 975 SKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKST 1054 (1236)
Q Consensus 975 ~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKST 1054 (1236)
.+...++.|+.++.+++++...+.+ +.+...-.++++||+|+||++ ..++|+|+||++++||||||+|||||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~~~---~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFPDE---QTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCCcc---ccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 9999999999999998877654411 111111279999999999976 457999999999999999999999999999
Q ss_pred HHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHh
Q 040099 1055 VISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISG 1119 (1236)
Q Consensus 1055 L~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~ 1119 (1236)
++++|.|-|+|++|+|.++|.|++.++.+.+|+.|++++|.++||++|+|+||. +.+++++++++
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~ 459 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLES 459 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999994 78899999999
Q ss_pred hhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhc
Q 040099 1120 LQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNA 1199 (1236)
Q Consensus 1120 lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~a 1199 (1236)
.|+||+|.+||+|.+|||||||||||||+||+|.|++||||||.+||++||++|.+.|.+..+++|+|+||||+..++.|
T Consensus 460 ~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~ 539 (573)
T COG4987 460 APDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERM 539 (573)
T ss_pred ChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChhHHhhccCcccHHhhhc
Q 040099 1200 HLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEP 1233 (1236)
Q Consensus 1200 D~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1233 (1236)
|||+|||+|+++|+|+|++|+++ +|.|++|++.
T Consensus 540 drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q~ 572 (573)
T COG4987 540 DRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQL 572 (573)
T ss_pred CEEEEEECCeeeecCCHHhhhcc-ccHHHHHhcc
Confidence 99999999999999999999996 9999999863
No 59
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=6.5e-76 Score=734.15 Aligned_cols=549 Identities=28% Similarity=0.408 Sum_probs=468.3
Q ss_pred hHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 675 LSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFA 754 (1236)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 754 (1236)
+++++.+.++.+..+.+.++++++..++....++++..+++...... ....+...++++.++..+..++..+...
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (588)
T PRK13657 7 YARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG-----DIFPLLAAWAGFGLFNIIAGVLVARHAD 81 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555666666777777777777777777788888887654321 1111222233333333333333344444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 040099 755 VAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLA 834 (1236)
Q Consensus 755 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~ 834 (1236)
+...++..+++.++|+++++.|..+|+ +.++|++++|+++|++.+...+...+...+..++..++.+++++.++|.++
T Consensus 82 ~~~~~~~~~l~~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (588)
T PRK13657 82 RLAHRRRLAVLTEYFERIIQLPLAWHS--QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLS 159 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHC--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555566777999999999999998 478999999999999999988888888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040099 835 LLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMS 914 (1236)
Q Consensus 835 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1236)
+++++++|+.+++..+..+..++..++..+...+..+.+.|.++|+++||+|+.++++.++|.+..++..+...+.....
T Consensus 160 l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (588)
T PRK13657 160 LVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWW 239 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888887777777888888889999999999999999999999999999999999988888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 040099 915 GIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKI 994 (1236)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 994 (1236)
.....+..++..+..++++++|++++..|.+++|+++++..++.....++..+...+..+..+..+.+++.++++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~ 319 (588)
T PRK13657 240 ALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDV 319 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 77777788888888889999999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECC
Q 040099 995 DSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDG 1074 (1236)
Q Consensus 995 ~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG 1074 (1236)
+.... ....+...+.|+++||+|+||++ .++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 320 ~~~~~-~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g 396 (588)
T PRK13657 320 RDPPG-AIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDG 396 (588)
T ss_pred CCCCC-CCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECC
Confidence 21111 11112234679999999999853 3599999999999999999999999999999999999999999999999
Q ss_pred eecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhH
Q 040099 1075 VEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQ 1139 (1236)
Q Consensus 1075 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQ 1139 (1236)
+|+++++.+++|++|+||||||.+|+|||||||. +.+++++++.++|+|+||.+|++|.+|||||
T Consensus 397 ~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq 476 (588)
T PRK13657 397 TDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGE 476 (588)
T ss_pred EEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHH
Confidence 9999999999999999999999999999999995 5678889999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHH
Q 040099 1140 KQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1140 rQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
||||||||||+++|+|||||||||+||++||+.+.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|++|
T Consensus 477 ~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l 556 (588)
T PRK13657 477 RQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDEL 556 (588)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998789999999999999999999999999999999999999
Q ss_pred hhccCcccHHhhhcc
Q 040099 1220 ISTKNGIYTSLIEPH 1234 (1236)
Q Consensus 1220 l~~~~g~y~~L~~~q 1234 (1236)
+++ ++.|++|++.+
T Consensus 557 ~~~-~~~y~~l~~~~ 570 (588)
T PRK13657 557 VAR-GGRFAALLRAQ 570 (588)
T ss_pred HHC-CChHHHHHHHh
Confidence 986 89999998754
No 60
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=5.4e-76 Score=727.29 Aligned_cols=536 Identities=19% Similarity=0.151 Sum_probs=454.3
Q ss_pred cchHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHH
Q 040099 44 RIPFHKLLSFAD-LLDSVLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASF 122 (1236)
Q Consensus 44 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (1236)
+..+++++++++ ++++ .++++++++++.++.....|++++.++|..... .. .. ...++++.++.+++.+
T Consensus 2 ~~~~~~l~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~----~~----~~~~~~~~~~~~~~~~ 71 (555)
T TIGR01194 2 KAAIGEILALLRSPFPA-ITAFSIALGLAGGLAIIALLASINNAIHEENFL-GQ----GS----LFSFGGLCLLALLFRI 71 (555)
T ss_pred CchHHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cc----hH----HHHHHHHHHHHHHHHH
Confidence 345788889888 7755 456667777777777777888888888742111 00 01 1123344556677889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 123 FQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFF 202 (1236)
Q Consensus 123 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1236)
+..++....+.++..++|.++|+|++++|+.||++. ++|++++|+++|++.+++++.. ++.++..+++++++++++++
T Consensus 72 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~ 149 (555)
T TIGR01194 72 GADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAY 149 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999865 77888888889999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHH--HHHHHHHHHHHHHHHH
Q 040099 203 KGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQ--QASSIYNKCLVKSYKS 280 (1236)
Q Consensus 203 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~--~~~~~~~~~~~~~~~~ 280 (1236)
++|.+++++++++|+.+++..++.++.++..++.++..+++++.+.|.+.|++++|+|+.++ .+.++|++..++..+.
T Consensus 150 ~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 229 (555)
T TIGR01194 150 LSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADL 229 (555)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999988888888888888899999999999999999999999999999954 5678899988888888
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 281 SVQEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFE 360 (1236)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~ 360 (1236)
..+.........++..++..+..++++++|++. |.+|+|++++|+.++.....|+..++..+..++++.++++|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ 306 (555)
T TIGR01194 230 HIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLAD 306 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666666555555555555555566666654 78999999999999999999999999999999999999999999
Q ss_pred HhccCCC--cc-c-cccCCC---CCCCCCCcEEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHH
Q 040099 361 AINRKPE--ID-L-CCVNGK---KLDDIRGDIELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVIS 431 (1236)
Q Consensus 361 ~l~~~~~--~~-~-~~~~~~---~~~~~~~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ 431 (1236)
+++.+++ .. + +..... ++....+.|+++||+|+|++.+ ++++|+|+||++++||++|||||||||||||++
T Consensus 307 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ 386 (555)
T TIGR01194 307 FGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAK 386 (555)
T ss_pred HHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHH
Confidence 9863211 11 0 000000 1112246799999999997532 236999999999999999999999999999999
Q ss_pred HHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCC
Q 040099 432 LIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQ 511 (1236)
Q Consensus 432 ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~ 511 (1236)
+|+|+|+|++|+|.+||+|+++++.+++|++++||+||+++|++|+++|+ .+++++++++++++.+++++++.++|+
T Consensus 387 ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~ 463 (555)
T TIGR01194 387 LFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDG 463 (555)
T ss_pred HHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhccccc
Confidence 99999999999999999999999999999999999999999999999995 466788999999999999999999999
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHH-HH-ccCceEEEEecCchhHhhcC
Q 040099 512 GLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALD-RV-MINRTTVIVSHRLSLIRNAN 589 (1236)
Q Consensus 512 g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~~~~~~~ad 589 (1236)
||||. .+|||||||||+||||++++|+|||||||||+||+++++.+.+.+. .+ .+++|+|+||||+++++.||
T Consensus 464 g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d 538 (555)
T TIGR01194 464 GFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELAD 538 (555)
T ss_pred ccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCC
Confidence 99995 6899999999999999999999999999999999999999988764 34 35899999999999999999
Q ss_pred eEEEEECCEEEEE
Q 040099 590 IIAVIQQGKIVEK 602 (1236)
Q Consensus 590 ~i~vl~~G~i~~~ 602 (1236)
+|++|++|+++|.
T Consensus 539 ~i~~l~~G~i~~~ 551 (555)
T TIGR01194 539 QIIKLAAGCIVKD 551 (555)
T ss_pred EEEEEECCEEEEe
Confidence 9999999999864
No 61
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1e-75 Score=728.44 Aligned_cols=549 Identities=28% Similarity=0.404 Sum_probs=471.7
Q ss_pred hHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 675 LSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFA 754 (1236)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 754 (1236)
+++++.+.+++++.+++.++++++..++.+..+++++.+++....... ...+...++++.++..+..++..+...
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD-----VLPTLALWAGFGVFNTIAYVLVAREAD 81 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666666777778888888888888888888899988886543211 111222222233333344444444445
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 040099 755 VAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLA 834 (1236)
Q Consensus 755 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~ 834 (1236)
....++..++|.++|++++++|++||++ +++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++
T Consensus 82 ~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 159 (585)
T TIGR01192 82 RLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLS 159 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666677779999999999999984 78999999999999999999988888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040099 835 LLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMS 914 (1236)
Q Consensus 835 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1236)
+++++++|+.+++..+..++.++..++.....++..+.+.|+++|+++||+|+.++.+.++|.+..++..+...+.....
T Consensus 160 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (585)
T TIGR01192 160 IVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWW 239 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888877777777888888999999999999999999999999999999998888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 040099 915 GIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKI 994 (1236)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 994 (1236)
++...+...+..+..++++++|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++.+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 319 (585)
T TIGR01192 240 ALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQR 319 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 77777777777788888899999999999999999999999999999999999999999999999999999998765433
Q ss_pred CCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECC
Q 040099 995 DSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDG 1074 (1236)
Q Consensus 995 ~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG 1074 (1236)
..... ....+...+.|+++||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|++||
T Consensus 320 ~~~~~-~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g 396 (585)
T TIGR01192 320 EEPAD-APELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDG 396 (585)
T ss_pred cCCcc-CCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECC
Confidence 21111 01112234679999999999853 3589999999999999999999999999999999999999999999999
Q ss_pred eecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhH
Q 040099 1075 VEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQ 1139 (1236)
Q Consensus 1075 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQ 1139 (1236)
+|+++++.+.+|+++++|||||.+|++||+|||. +.+++++++.++|+|+||.+|++|.+|||||
T Consensus 397 ~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq 476 (585)
T TIGR01192 397 IDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGE 476 (585)
T ss_pred EEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHH
Confidence 9999999999999999999999999999999994 4467788999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHH
Q 040099 1140 KQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1140 rQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
||||+|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 477 ~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 556 (585)
T TIGR01192 477 RQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQEL 556 (585)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hhccCcccHHhhhcc
Q 040099 1220 ISTKNGIYTSLIEPH 1234 (1236)
Q Consensus 1220 l~~~~g~y~~L~~~q 1234 (1236)
+++ +|.|+++++.|
T Consensus 557 ~~~-~~~y~~l~~~~ 570 (585)
T TIGR01192 557 IQK-DGRFYKLLRRS 570 (585)
T ss_pred HHC-CChHHHHHHhC
Confidence 996 89999999866
No 62
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.1e-78 Score=701.78 Aligned_cols=475 Identities=29% Similarity=0.457 Sum_probs=371.7
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC----CcEEEECCeecCCCCHHH
Q 040099 384 DIELKDVNFSYPARPD-EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ----AGEVLIDGVNLKEFQLKW 458 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~~~g~~~~~~~~~~ 458 (1236)
-++++|++..|....+ .++++||||+|.+||++||||+|||||||+++.|+|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 4899999999975422 35999999999999999999999999999999999999987 899999999998887765
Q ss_pred H---h-cceEEEccCCC-CCch--hHHHHHh----cCCCCC---CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCC
Q 040099 459 I---R-EKIGLVSQEPV-LLSS--SIRDNIA----YGKTHA---TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQL 524 (1236)
Q Consensus 459 ~---r-~~i~~v~Q~~~-l~~~--ti~~ni~----~g~~~~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~L 524 (1236)
+ | +.|+||||+|. .+|. ||.+-|. ...... ..++..+.++.+++.+-... ...++.|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 4 3 57999999985 4443 6655554 222111 12334444555544332222 3466799
Q ss_pred ChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEECCEEEE
Q 040099 525 SGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVE 601 (1236)
Q Consensus 525 SgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~ 601 (1236)
|||||||+.||+||+.+|++||+||||++||+.++++|.+.|+++. .|.++|+|||++..+.. ||||+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999986 47899999999999876 99999999999999
Q ss_pred EeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhh
Q 040099 602 KGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYL 681 (1236)
Q Consensus 602 ~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1236)
.|+.+++++++...|.+..-.... .
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~a~p----------~--------------------------------------------- 260 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLAAVP----------R--------------------------------------------- 260 (539)
T ss_pred ecCHHHHHhccCCcccHHHHhhCC----------C---------------------------------------------
Confidence 999999998876666543210000 0
Q ss_pred cCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 682 NSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLI 761 (1236)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 761 (1236)
T Consensus 261 -------------------------------------------------------------------------------- 260 (539)
T COG1123 261 -------------------------------------------------------------------------------- 260 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 040099 762 KRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIF 841 (1236)
Q Consensus 762 ~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~ 841 (1236)
.+.....
T Consensus 261 ------------------~~~~~~~------------------------------------------------------- 267 (539)
T COG1123 261 ------------------LGDEKII------------------------------------------------------- 267 (539)
T ss_pred ------------------ccccccc-------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 040099 842 PLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLS 921 (1236)
Q Consensus 842 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1236)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc
Q 040099 922 FFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTG 1001 (1236)
Q Consensus 922 ~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~ 1001 (1236)
.......
T Consensus 268 -------------------------------------------------------------------~~~~~~~------ 274 (539)
T COG1123 268 -------------------------------------------------------------------RLPRRGP------ 274 (539)
T ss_pred -------------------------------------------------------------------ccccccc------
Confidence 0000000
Q ss_pred CccCCccccEEEeEEEEECCCC--------CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEEC
Q 040099 1002 RTLENVMGEVQFLRVSFKYPTR--------PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLD 1073 (1236)
Q Consensus 1002 ~~~~~~~g~I~f~~Vsf~Y~~~--------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~id 1073 (1236)
.....-++++|++.+|..+ ....+++||||+|++||++||||+||||||||.++|+|+++|++|+|.++
T Consensus 275 ---~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~ 351 (539)
T COG1123 275 ---LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFD 351 (539)
T ss_pred ---cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEe
Confidence 0001137788999999742 12468999999999999999999999999999999999999999999999
Q ss_pred Cee--cccCChHHHhcceEEEcCCCCCC---hhhHHHHHHHHhhhch---------HHHhhh--hchhh-hhcCCCCCCC
Q 040099 1074 GVE--IQKLQVKWLRQQMGVVSQEPVLF---SDTIRANIAEMANANG---------FISGLQ--EGYDT-LVGERGVQLS 1136 (1236)
Q Consensus 1074 G~d--i~~i~~~~lR~~i~~V~Qdp~LF---~gTIreNL~~~a~~~~---------~i~~lp--~Gldt-~vge~G~~LS 1136 (1236)
|.| .+.-+...+|+++-+|+|||+-. ..||+++|.+-...+. -+..+= -|+.. .+......||
T Consensus 352 g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elS 431 (539)
T COG1123 352 GQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELS 431 (539)
T ss_pred CcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchhcC
Confidence 977 33334567888999999999632 3599999863322211 111110 13333 3556778999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEe
Q 040099 1137 GGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEK 1213 (1236)
Q Consensus 1137 GGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~ 1213 (1236)
||||||+||||||..+|++||+|||||+||+-+.+.|.+.|+++.+ |.|.|+|||+++.++. ||||+||++|+|||.
T Consensus 432 GGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~ 511 (539)
T COG1123 432 GGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEE 511 (539)
T ss_pred cchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEe
Confidence 9999999999999999999999999999999999999999988754 6899999999999987 999999999999999
Q ss_pred cChhHHhhccCcccHHhh
Q 040099 1214 GSHESLISTKNGIYTSLI 1231 (1236)
Q Consensus 1214 Gt~~eLl~~~~g~y~~L~ 1231 (1236)
|+.+++.+++...|.+..
T Consensus 512 G~~~~v~~~p~h~Ytr~L 529 (539)
T COG1123 512 GPTEKVFENPQHPYTRKL 529 (539)
T ss_pred CCHHHHhcCCCChHHHHH
Confidence 999999998888887754
No 63
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4.2e-76 Score=727.88 Aligned_cols=507 Identities=22% Similarity=0.300 Sum_probs=435.3
Q ss_pred HhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 678 LAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHW--ALMFVALGAASLLTSPLSMYCFAV 755 (1236)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~ 755 (1236)
++.+.+++++.+++.++++++..++....+++++.+++....... ....+ ...++++.++..++.++..++...
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (529)
T TIGR02868 4 ILPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP----VLYLSVAAVAVRAFGIGRAVFRYLERLVGHD 79 (529)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666666777777777777777777778887775432111 11111 111223445566777888888889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 040099 756 AGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLAL 835 (1236)
Q Consensus 756 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~l 835 (1236)
.+.++..++|.++|++++++|.+||+ ++++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+++
T Consensus 80 ~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 157 (529)
T TIGR02868 80 AALRSLGRLRVRVYDRLARLALAGRR--RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAAL 157 (529)
T ss_pred HHHHHHHHHHHHHHHHhhccCccccc--cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999998 4789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040099 836 LVLAIFPLLGITG-HIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMS 914 (1236)
Q Consensus 836 v~l~~~pl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1236)
++++.+|++.++. .+..+..+...++.++..++..+.+.|.++|+++||+|+.++++.++|.+..++..+...+.....
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (529)
T TIGR02868 158 VLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARAT 237 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888876655 444444455566677777888999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 040099 915 GIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKI 994 (1236)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 994 (1236)
.....+..++..+..++++++|++++..|.++.|.++++..+......++..+...+..+..+..+.+|+.++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~ 317 (529)
T TIGR02868 238 GLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPR 317 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 88888888888888888999999999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCccc-cCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEEC
Q 040099 995 DSSEYT-GRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLD 1073 (1236)
Q Consensus 995 ~~~~~~-~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~id 1073 (1236)
+..+.. ....++..++|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++|
T Consensus 318 ~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~ 395 (529)
T TIGR02868 318 PEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLD 395 (529)
T ss_pred CCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 221111 11112234679999999999854 359999999999999999999999999999999999999999999999
Q ss_pred CeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChh
Q 040099 1074 GVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGG 1138 (1236)
Q Consensus 1074 G~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGG 1138 (1236)
|+|++++ .+++|++|+||||||+||+|||||||. +.+++++++.++|+||||.+||+|.+||||
T Consensus 396 g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 474 (529)
T TIGR02868 396 GVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGG 474 (529)
T ss_pred CEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHH
Confidence 9999999 999999999999999999999999994 678899999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCc
Q 040099 1139 QKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRL 1193 (1236)
Q Consensus 1139 QrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl 1193 (1236)
||||||||||+++||+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 475 QrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 475 ERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999988899999999996
No 64
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.1e-76 Score=728.51 Aligned_cols=524 Identities=26% Similarity=0.385 Sum_probs=456.4
Q ss_pred HHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q 040099 703 IPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDE 782 (1236)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~ 782 (1236)
....+++++.+++........ ......|..+++++.++..++.+++.+.....+.+...++|.++|++++++|++||+
T Consensus 11 ~~~~p~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~- 88 (569)
T PRK10789 11 QLIPPKVVGIIVDGVTEQHMT-TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYL- 88 (569)
T ss_pred HHHHHHHHHHHHHHhccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHc-
Confidence 334455666666654322111 112233445555555566677778888888899999999999999999999999998
Q ss_pred cCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 040099 783 ADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIA-FKACWQLALLVLAIFPLLGITGHIQMKSMKGFSAN 861 (1236)
Q Consensus 783 ~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~ 861 (1236)
++++|++++|+++|++.++..+...+..++..++..++.++++ ++++|.+++++++++|+.+++..+..++.++..++
T Consensus 89 -~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~ 167 (569)
T PRK10789 89 -RHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKL 167 (569)
T ss_pred -CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999888787877777766666665555 57999999999999999988888888888777778
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 862 AENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVD 941 (1236)
Q Consensus 862 ~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~ 941 (1236)
.++..++..+.+.|.++|+++||+|+.++++.++|.+..++..+...+..........+......+..++++++|++++.
T Consensus 168 ~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~ 247 (569)
T PRK10789 168 AQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVV 247 (569)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999888888877777777777777777778888899999999
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEeEEEEECC
Q 040099 942 HKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVSFKYP 1021 (1236)
Q Consensus 942 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~ 1021 (1236)
.|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.+++.+... ...+...+.|+|+||+|+|+
T Consensus 248 ~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~~~y~ 324 (569)
T PRK10789 248 NGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQFTYP 324 (569)
T ss_pred cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEEEECC
Confidence 999999999999999999999999999999999999999999999998654332111 11223356899999999998
Q ss_pred CCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChh
Q 040099 1022 TRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSD 1101 (1236)
Q Consensus 1022 ~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~g 1101 (1236)
.. +.++|+|+||+|+|||++|||||||||||||+++|.|+|+|++|+|++||+|+++++.+++|+++++|||+|++|++
T Consensus 325 ~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ 403 (569)
T PRK10789 325 QT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSD 403 (569)
T ss_pred CC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccc
Confidence 53 34699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCC
Q 040099 1102 TIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALD 1166 (1236)
Q Consensus 1102 TIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD 1166 (1236)
||||||. +.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+||
T Consensus 404 ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD 483 (569)
T PRK10789 404 TVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVD 483 (569)
T ss_pred cHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCC
Confidence 9999994 4567888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhcc
Q 040099 1167 IESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEPH 1234 (1236)
Q Consensus 1167 ~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q 1234 (1236)
+++++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|++|++.|
T Consensus 484 ~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~ 550 (569)
T PRK10789 484 GRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQ 550 (569)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHh
Confidence 99999999999998889999999999999999999999999999999999999986 89999999765
No 65
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.6e-75 Score=730.97 Aligned_cols=553 Identities=33% Similarity=0.504 Sum_probs=478.9
Q ss_pred HHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 677 RLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVA 756 (1236)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 756 (1236)
.++.+.++.++.+.+.++++++.+++....++++..+++....... ......+..+++++.++..++.+++.+.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS--SGLLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555666667777777777777778888888876432211 11122233444444555566777888888999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 040099 757 GCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALL 836 (1236)
Q Consensus 757 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv 836 (1236)
+.++...+|..+++++++.|.++|++ .++|++++|+++|++.+++++...+..++..++.+++.+++++.++|.++++
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSL 163 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999984 7799999999999999999999999898999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040099 837 VLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGI 916 (1236)
Q Consensus 837 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1236)
+++..|+.++...+..++.++..++..+...+..+.+.|.++|+++||+++.++++.++|.+..++..+...+.......
T Consensus 164 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (576)
T TIGR02204 164 VLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRAL 243 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888888888888888888888999999999999999999999999999999999888887777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Q 040099 917 GFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDS 996 (1236)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 996 (1236)
...+...+..+..++++++|++++..|.++.|.++++..+..+...|+..+...+..+..+..+.+|+.++++.+++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 323 (576)
T TIGR02204 244 LTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKA 323 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 66666666667777888999999999999999999999999999999999999999999999999999999886544221
Q ss_pred CccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCee
Q 040099 997 SEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVE 1076 (1236)
Q Consensus 997 ~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~d 1076 (1236)
.........+..+.|+|+||+|+||++++.++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|
T Consensus 324 ~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 324 PAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred CCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 11111111123457999999999986433579999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHH
Q 040099 1077 IQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQ 1141 (1236)
Q Consensus 1077 i~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQ 1141 (1236)
+++++.+++|++|+||||||++|+|||||||. +.+++++++.++|+|+||.+|++|.+|||||||
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999995 456788899999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhh
Q 040099 1142 RVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1142 RlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
||+||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred ccCcccHHhhhcc
Q 040099 1222 TKNGIYTSLIEPH 1234 (1236)
Q Consensus 1222 ~~~g~y~~L~~~q 1234 (1236)
+ ++.|++|++.|
T Consensus 564 ~-~~~~~~l~~~~ 575 (576)
T TIGR02204 564 K-GGLYARLARLQ 575 (576)
T ss_pred c-CChHHHHHhhc
Confidence 6 89999999876
No 66
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-77 Score=658.51 Aligned_cols=477 Identities=34% Similarity=0.462 Sum_probs=418.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 040099 751 YCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVV-GLVIAFKA 829 (1236)
Q Consensus 751 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~-~~ii~~~~ 829 (1236)
.++..+++.+.+.+-.+.|.|+.++++.|.-+ ..+|.+...+..-...++..+...+..++..++-+.. +.++...+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 45667788888899999999999999999874 5677776666666666666666666666665554444 34445568
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHH
Q 040099 830 CWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIR 909 (1236)
Q Consensus 830 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1236)
+|+.+++.++++.+.+++.....-......+..+++..++++...+++-+.+|+|.|+.|+++..+|.+.++.+.++..+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 99999999888888777766555555566778888899999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 910 QGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLID 989 (1236)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 989 (1236)
.+.--.+.......++.....++...+...+..|.+|.|+++....++.....|+..++....++.++...+++++++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 76665555555566667777788888888999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcE
Q 040099 990 QVSKIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGH 1069 (1236)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~ 1069 (1236)
.+.+........+-.+-..|.|.|+||+|.|.++ .++|+|+||++++|+++||||+||+||||+.++|+||||+++|.
T Consensus 242 ~~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~~~--r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 242 VEAEVSDAPDAPPLWPVRLGAVAFINVSFAYDPR--RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred cchhhccCCCCccccccccceEEEEEEEeecccc--chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 7766543322111111346889999999999754 57999999999999999999999999999999999999999999
Q ss_pred EEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCC
Q 040099 1070 ITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQ 1134 (1236)
Q Consensus 1070 I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~ 1134 (1236)
|.|||+||+++..+++|+.||+||||..||++|+..|+. +.|++++||+++|+||||.|||+|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 999999999999999999999999999999999999994 78999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 040099 1135 LSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1135 LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~G 1214 (1236)
||||||||+||||++|++|+||+||||||+||..||++||.+|++..+++|.++|||||+||.+||.|+||++|+|+|.|
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg 479 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERG 479 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhhccCcccHHhhh
Q 040099 1215 SHESLISTKNGIYTSLIE 1232 (1236)
Q Consensus 1215 t~~eLl~~~~g~y~~L~~ 1232 (1236)
+|+||+++ +|.|++||.
T Consensus 480 ~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 480 THEELLAA-GGLYAEMWR 496 (497)
T ss_pred cHHHHHHc-CChHHHHhc
Confidence 99999997 999999995
No 67
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.3e-73 Score=705.71 Aligned_cols=512 Identities=25% Similarity=0.331 Sum_probs=445.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 687 PALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRS 766 (1236)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 766 (1236)
+.+.++++++++.+++.+..+++.+.+++....+... ......+..++++++++..++.++..+...+.+.++..++|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 3 RALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777777788888888888888866321111 122334555566667777888999999999999999999999
Q ss_pred HHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 040099 767 MCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGI 846 (1236)
Q Consensus 767 ~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~ 846 (1236)
++|+++++.|..||+ ++++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.+++++++.+|+..+
T Consensus 82 ~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 82 RLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999998 488999999999999999999999888888888888888999999999999999999998888
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 847 TGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFF 926 (1236)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1236)
+..+..++.++..++..+..++..+.+.|+++|+++||+|+.++++.++|.+..++..+...+..........+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777888888999999999999999999999999999999998888877777776666666666666
Q ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCC
Q 040099 927 MAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLEN 1006 (1236)
Q Consensus 927 ~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~ 1006 (1236)
+...+++.++++.+..|.+++|.++++..+......|+..+...+..+.++..+++|+.++++.+++..... ..++.
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCC
Confidence 666666566667777999999999999888889999999999999999999999999999997543221111 11111
Q ss_pred ccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHh
Q 040099 1007 VMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLR 1086 (1236)
Q Consensus 1007 ~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR 1086 (1236)
..+.|+|+||+|+||++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23579999999999864 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1087 QQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
++++||||||++|++||||||. +.++++++++++|+||||.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999984 5678899999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEE
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVV 1205 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl 1205 (1236)
+|+|||||||||+||++||+.+++.|++..+++|+|+||||+++++.||+|+||
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999986
No 68
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-74 Score=719.71 Aligned_cols=491 Identities=25% Similarity=0.382 Sum_probs=363.7
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecC----------
Q 040099 384 DIELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLK---------- 452 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~---------- 452 (1236)
-|+++|++++|+... +.++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 589999999996321 246999999999999999999999999999999999999999999999997552
Q ss_pred CCCHH---HHh-cceEEEccCC--CCCc-hhHHHHHhcCCC---CCCHH----HHHHHHHHhccHHHHHhCCCCcccccc
Q 040099 453 EFQLK---WIR-EKIGLVSQEP--VLLS-SSIRDNIAYGKT---HATKE----EIQAAAEAANASHFIKNLPQGLDTNVG 518 (1236)
Q Consensus 453 ~~~~~---~~r-~~i~~v~Q~~--~l~~-~ti~~ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g 518 (1236)
+.+.. .+| ++||||+|+| .+++ .||+|||.++.. ..+.+ ++.++++..++.+ .+....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------~~~~~~ 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPE--------AQTILS 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCC--------hhhHHh
Confidence 12222 233 4799999998 5666 599999987521 12222 2333333333311 012345
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-c-CceEEEEecCchhHhh-cCeEEEEE
Q 040099 519 EHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-I-NRTTVIVSHRLSLIRN-ANIIAVIQ 595 (1236)
Q Consensus 519 ~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~~~~~~~-ad~i~vl~ 595 (1236)
....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. + |+|+|+|||+++.+.. ||||++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 5667999999999999999999999999999999999999999999999985 3 7899999999999865 99999999
Q ss_pred CCEEEEEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchh
Q 040099 596 QGKIVEKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSL 675 (1236)
Q Consensus 596 ~G~i~~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (1236)
+|+|++.|++++++..+...|.+-+.... . . . . . .
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~~~~l~~~~--~--------~--~------~---------~----------~-------- 278 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPYTRALLAAV--P--------Q--L------G---------A----------M-------- 278 (623)
T ss_pred CCeecccCCHHHhhcCCCChhhhhhhhcc--C--------c--c------c---------c----------c--------
Confidence 99999999988876542211211000000 0 0 0 0 0 0
Q ss_pred HHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 676 SRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAV 755 (1236)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 755 (1236)
...
T Consensus 279 -------------------------------------------~~~---------------------------------- 281 (623)
T PRK10261 279 -------------------------------------------KGL---------------------------------- 281 (623)
T ss_pred -------------------------------------------ccc----------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 040099 756 AGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLAL 835 (1236)
Q Consensus 756 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~l 835 (1236)
..+ .-++... . +
T Consensus 282 ------------------~~~-~~~~~~~--~---------~-------------------------------------- 293 (623)
T PRK10261 282 ------------------DYP-RRFPLIS--L---------E-------------------------------------- 293 (623)
T ss_pred ------------------cCC-ccccccc--c---------c--------------------------------------
Confidence 000 0000000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040099 836 LVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSG 915 (1236)
Q Consensus 836 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1236)
.
T Consensus 294 ---------------------------------------------------------------------~---------- 294 (623)
T PRK10261 294 ---------------------------------------------------------------------H---------- 294 (623)
T ss_pred ---------------------------------------------------------------------c----------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 040099 916 IGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKID 995 (1236)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 995 (1236)
.. . ..+....
T Consensus 295 ---------------------------~~-----------------------------~--------------~~~~~~~ 304 (623)
T PRK10261 295 ---------------------------PA-----------------------------K--------------QEPPIEQ 304 (623)
T ss_pred ---------------------------cc-----------------------------c--------------cCccccc
Confidence 00 0 0000000
Q ss_pred CCccccCccCCccccEEEeEEEEECCCCC--------CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCC
Q 040099 996 SSEYTGRTLENVMGEVQFLRVSFKYPTRP--------HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSS 1067 (1236)
Q Consensus 996 ~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~--------~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~ 1067 (1236)
... +....-++++||++.|+.+. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++
T Consensus 305 ~~~------~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~ 378 (623)
T PRK10261 305 DTV------VDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQG 378 (623)
T ss_pred ccc------cCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCC
Confidence 000 00011489999999996321 1358999999999999999999999999999999999999999
Q ss_pred cEEEECCeecccCChH---HHhcceEEEcCCC--CCCh-hhHHHHHHHHhhh-------------chHHHhhhhchh-hh
Q 040099 1068 GHITLDGVEIQKLQVK---WLRQQMGVVSQEP--VLFS-DTIRANIAEMANA-------------NGFISGLQEGYD-TL 1127 (1236)
Q Consensus 1068 G~I~idG~di~~i~~~---~lR~~i~~V~Qdp--~LF~-gTIreNL~~~a~~-------------~~~i~~lp~Gld-t~ 1127 (1236)
|+|.++|.++...+.. .+|++|+||||+| .++. .||.||+...... .++++.+ |++ ..
T Consensus 379 G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~--gL~~~~ 456 (623)
T PRK10261 379 GEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERV--GLLPEH 456 (623)
T ss_pred cEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHc--CCCHHH
Confidence 9999999999877543 4678899999998 3665 5999998632211 1122221 453 33
Q ss_pred hcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEE
Q 040099 1128 VGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAV 1204 (1236)
Q Consensus 1128 vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~V 1204 (1236)
......+||||||||++|||||+.+|+|||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+|
T Consensus 457 ~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~v 536 (623)
T PRK10261 457 AWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAV 536 (623)
T ss_pred hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEE
Confidence 4566779999999999999999999999999999999999999999999988753 6899999999999976 999999
Q ss_pred EeCCEEEEecChhHHhhccCcccHH
Q 040099 1205 VSQGMIVEKGSHESLISTKNGIYTS 1229 (1236)
Q Consensus 1205 l~~G~Ive~Gt~~eLl~~~~g~y~~ 1229 (1236)
|++|+|+|.|+++++..++...|.+
T Consensus 537 l~~G~iv~~g~~~~i~~~p~~~~~~ 561 (623)
T PRK10261 537 MYLGQIVEIGPRRAVFENPQHPYTR 561 (623)
T ss_pred EECCEEEEecCHHHHhcCCCCHHHH
Confidence 9999999999999998765555654
No 69
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.9e-72 Score=693.19 Aligned_cols=523 Identities=21% Similarity=0.281 Sum_probs=446.9
Q ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 685 EVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRI 764 (1236)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 764 (1236)
+++.++..++++++..+.....++++..+++....... ......+..+++++.++..++.+++.++....+.++..++
T Consensus 4 ~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 4 NKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS--VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666666666666777778888875542111 1122334555555666677888889999999999999999
Q ss_pred HHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 040099 765 RSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGD-TLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPL 843 (1236)
Q Consensus 765 r~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~-~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl 843 (1236)
|.++|+++++.|+.. .+...+++++|++.++..+.. .+..++..+..++ .++++++++|.+++++++..|+
T Consensus 82 r~~~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l 153 (544)
T TIGR01842 82 NQPIFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVV 153 (544)
T ss_pred HHHHHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999843 245688899999999998877 4445555444444 4467788999999999888888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 844 LGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFF 923 (1236)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1236)
++++..+..+..++..++.++..++..+.+.|+++|+++||+|+.++++.++|.+..++..+...+.....+....+...
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (544)
T TIGR01842 154 LVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKY 233 (544)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777777788888888999999999999999999999999999999999888888877777777777777
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCc
Q 040099 924 FFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRT 1003 (1236)
Q Consensus 924 ~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~ 1003 (1236)
+..+..++++++|++++..|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.+++.... ..
T Consensus 234 ~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~ 309 (544)
T TIGR01842 234 FRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CC
Confidence 77778888899999999999999999999999999999999999999999999999999999999765443211 11
Q ss_pred cCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH
Q 040099 1004 LENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK 1083 (1236)
Q Consensus 1004 ~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~ 1083 (1236)
.+...+.|+++||+|+||+. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+
T Consensus 310 ~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~ 388 (544)
T TIGR01842 310 LPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRE 388 (544)
T ss_pred CCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHH
Confidence 12234679999999999854 24699999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARA 1148 (1236)
.+|++++||||||++|++|++|||. +.++++++++++|+|+||.+|++|.+||||||||++||||
T Consensus 389 ~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARa 468 (544)
T TIGR01842 389 TFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARA 468 (544)
T ss_pred HHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999994 4467789999999999999999999999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
++++|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||+++
T Consensus 469 ll~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 469 LYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred HhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 999999999999999999999999999999875 67999999999999999999999999999999999999763
No 70
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.4e-72 Score=750.54 Aligned_cols=504 Identities=19% Similarity=0.254 Sum_probs=421.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 040099 112 YLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGA 191 (1236)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~ 191 (1236)
+++++..++.+++.+++.+.+.+...++|.++++++++.|+.||+++ ++|++++|+++|++.+.+.+...+..++..++
T Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~ 1011 (1490)
T TIGR01271 933 GTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTL 1011 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556677788888899999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHH
Q 040099 192 SFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYN 271 (1236)
Q Consensus 192 ~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~ 271 (1236)
.+++.++++++++|.++++++..+.+++++..++.+..++..+......+.+.+.+.|+++|+.+||+|++++.+.++|.
T Consensus 1012 ~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~ 1091 (1490)
T TIGR01271 1012 IVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFH 1091 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHH
Confidence 99999999999999876655444444444555666666767777777888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH--HHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 272 KCLVKSYKSSVQEGLATGLGLGASVFIIFSAYG--LGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFA 349 (1236)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~ 349 (1236)
+..+...+..........+......++..+..+ +++++|. ..++.|.+..++.+.+.+..++..+...+..+.
T Consensus 1092 ~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le 1166 (1490)
T TIGR01271 1092 KALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVD 1166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988765544443333333333333322222111 1222232 234555555555666666778888888888999
Q ss_pred HHHHHHHHHHHHhccCCCccccccC--------------CCC--CCCCCCcEEEEeEEEECCCCCCCccccceeEEecCC
Q 040099 350 AGQAAAFKFFEAINRKPEIDLCCVN--------------GKK--LDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNG 413 (1236)
Q Consensus 350 ~~~~s~~ri~~~l~~~~~~~~~~~~--------------~~~--~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g 413 (1236)
.+..|.+|+.++++.+++.+..... ..+ ..+..|.|+|+||+|+|++. .+++|+||||+|+||
T Consensus 1167 ~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~G 1245 (1490)
T TIGR01271 1167 GLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGG 1245 (1490)
T ss_pred HHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCC
Confidence 9999999999999876654321100 000 11335789999999999743 467999999999999
Q ss_pred cEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHH
Q 040099 414 TIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEI 493 (1236)
Q Consensus 414 ~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~ 493 (1236)
|++||||+||||||||+++|+|+|+ ++|+|++||+|+++++.+.+|++|+||||||+||+|||||||.... .++++++
T Consensus 1246 ekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei 1323 (1490)
T TIGR01271 1246 QRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEI 1323 (1490)
T ss_pred CEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHH
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999997654 4689999
Q ss_pred HHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCc
Q 040099 494 QAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINR 573 (1236)
Q Consensus 494 ~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~ 573 (1236)
++|++.+++++++.++|+|+||.+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++
T Consensus 1324 ~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~ 1403 (1490)
T TIGR01271 1324 WKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNC 1403 (1490)
T ss_pred HHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred eEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHHhhhh
Q 040099 574 TTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQET 625 (1236)
Q Consensus 574 t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~~ 625 (1236)
|+|+||||++++.+||+|+||++|+|+|.|+|++|+++ ++.|+++++.+..
T Consensus 1404 TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1404 TVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADR 1454 (1490)
T ss_pred EEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhCh
Confidence 99999999999999999999999999999999999986 7899999876543
No 71
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-73 Score=697.47 Aligned_cols=452 Identities=22% Similarity=0.371 Sum_probs=353.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC--CCcEEEECCeecCCCCHHH-Hh
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP--QAGEVLIDGVNLKEFQLKW-IR 460 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r 460 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 3899999999962 4699999999999999999999999999999999999996 8999999999997766543 46
Q ss_pred cceEEEccCCCCCch-hHHHHHhcCCCC-----CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 461 EKIGLVSQEPVLLSS-SIRDNIAYGKTH-----ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
++++||+|++.+|.. |++||+.++... .+.++..+. +.+.+..+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLR-----AQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHH-----HHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988865 999999987421 122222111 22334444 45444556667899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENP 612 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~ 612 (1236)
||||+.+|++||||||||+||+.+...+.+.|.++. +++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998874 47899999999999865 999999999999988764433110
Q ss_pred cchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHH
Q 040099 613 YGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLG 692 (1236)
Q Consensus 613 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1236)
+..
T Consensus 234 -----~~~------------------------------------------------------------------------ 236 (506)
T PRK13549 234 -----DII------------------------------------------------------------------------ 236 (506)
T ss_pred -----HHH------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 693 AIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKV 772 (1236)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 772 (1236)
. .
T Consensus 237 ----------------------~-------------------------------------------------------~- 238 (506)
T PRK13549 237 ----------------------T-------------------------------------------------------M- 238 (506)
T ss_pred ----------------------H-------------------------------------------------------H-
Confidence 0 0
Q ss_pred hcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 773 VYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQM 852 (1236)
Q Consensus 773 l~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~ 852 (1236)
++.. . .
T Consensus 239 ------~~~~-~--~----------------------------------------------------------------- 244 (506)
T PRK13549 239 ------MVGR-E--L----------------------------------------------------------------- 244 (506)
T ss_pred ------hhCc-C--c-----------------------------------------------------------------
Confidence 0000 0 0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 853 KSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVT 932 (1236)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1236)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEE
Q 040099 933 FYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQ 1012 (1236)
Q Consensus 933 ~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~ 1012 (1236)
. ...+.... . . ...-|+
T Consensus 245 -------------~------------------------------------------~~~~~~~~-~-----~--~~~~l~ 261 (506)
T PRK13549 245 -------------T------------------------------------------ALYPREPH-T-----I--GEVILE 261 (506)
T ss_pred -------------c------------------------------------------cccccccc-C-----C--CCceEE
Confidence 0 00000000 0 0 011489
Q ss_pred EeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-CCCcEEEECCeecccCCh-HHHhcceE
Q 040099 1013 FLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-PSSGHITLDGVEIQKLQV-KWLRQQMG 1090 (1236)
Q Consensus 1013 f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-~~~G~I~idG~di~~i~~-~~lR~~i~ 1090 (1236)
++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+. +.+|+.++
T Consensus 262 ~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 341 (506)
T PRK13549 262 VRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIA 341 (506)
T ss_pred EecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCE
Confidence 9999999953223459999999999999999999999999999999999998 599999999999865543 45677899
Q ss_pred EEcCCC---CCCh-hhHHHHHHHH----h-h------------hchHHHhhhhchhh-hhcCCCCCCChhHHHHHHHHHH
Q 040099 1091 VVSQEP---VLFS-DTIRANIAEM----A-N------------ANGFISGLQEGYDT-LVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1091 ~V~Qdp---~LF~-gTIreNL~~~----a-~------------~~~~i~~lp~Gldt-~vge~G~~LSGGQrQRlaLARA 1148 (1236)
||||+| .+|. .|+.||+.-. . . +.++++.+ |++. ........||||||||++||||
T Consensus 342 ~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~a 419 (506)
T PRK13549 342 MVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRL--KVKTASPELAIARLSGGNQQKAVLAKC 419 (506)
T ss_pred EeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhc--CccCCCcccccccCCHHHHHHHHHHHH
Confidence 999996 3554 5999998521 0 0 11122222 3331 2345567899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
|+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|+++..|+++++.
T Consensus 420 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 420 LLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred HhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 999999999999999999999999999998864 47899999999999865 9999999999999999988874
No 72
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.5e-73 Score=699.56 Aligned_cols=459 Identities=29% Similarity=0.451 Sum_probs=355.0
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCCCHH
Q 040099 384 DIELKDVNFSYPAR-PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEFQLK 457 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 457 (1236)
-|+++|++++|+.. .++++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999631 124799999999999999999999999999999999999987 799999999999876643
Q ss_pred H---Hh-cceEEEccCCC--CCc-hhHHHHHhcCC---CCCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 458 W---IR-EKIGLVSQEPV--LLS-SSIRDNIAYGK---THATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 458 ~---~r-~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
. +| ++||||+|++. +++ .|+.+|+.++. ...+. +++.++++..++.+.. ........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 2 33 57999999985 444 48999986421 11122 3344445444443210 123445568
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEECCEEE
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQQGKIV 600 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~ 600 (1236)
||||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999875 37899999999999865 9999999999999
Q ss_pred EEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhh
Q 040099 601 EKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAY 680 (1236)
Q Consensus 601 ~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1236)
+.|+.++++..+...+.
T Consensus 237 ~~g~~~~~~~~~~~~~~--------------------------------------------------------------- 253 (529)
T PRK15134 237 EQNRAATLFSAPTHPYT--------------------------------------------------------------- 253 (529)
T ss_pred EeCCHHHHhhCCCCHHH---------------------------------------------------------------
Confidence 98876555321000000
Q ss_pred hcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 681 LNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKL 760 (1236)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 760 (1236)
.
T Consensus 254 ----------------------------------~--------------------------------------------- 254 (529)
T PRK15134 254 ----------------------------------Q--------------------------------------------- 254 (529)
T ss_pred ----------------------------------H---------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 040099 761 IKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAI 840 (1236)
Q Consensus 761 ~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~ 840 (1236)
.++ .. . +
T Consensus 255 ------~~~-----------~~-~-~------------------------------------------------------ 261 (529)
T PRK15134 255 ------KLL-----------NS-E-P------------------------------------------------------ 261 (529)
T ss_pred ------HHH-----------Hh-C-c------------------------------------------------------
Confidence 000 00 0 0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 040099 841 FPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGL 920 (1236)
Q Consensus 841 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1236)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccc
Q 040099 921 SFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYT 1000 (1236)
Q Consensus 921 ~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~ 1000 (1236)
...+. .. ...
T Consensus 262 --------------------------------------------------------------------~~~~~-~~-~~~ 271 (529)
T PRK15134 262 --------------------------------------------------------------------SGDPV-PL-PEP 271 (529)
T ss_pred --------------------------------------------------------------------ccccc-cc-CCC
Confidence 00000 00 000
Q ss_pred cCccCCccccEEEeEEEEECCCC--------CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEE
Q 040099 1001 GRTLENVMGEVQFLRVSFKYPTR--------PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITL 1072 (1236)
Q Consensus 1001 ~~~~~~~~g~I~f~~Vsf~Y~~~--------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~i 1072 (1236)
. ..-|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|.|+++ ++|+|++
T Consensus 272 ----~--~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~ 344 (529)
T PRK15134 272 ----A--SPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWF 344 (529)
T ss_pred ----C--CCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEE
Confidence 0 1138899999999631 12468999999999999999999999999999999999984 8999999
Q ss_pred CCeecccCChH---HHhcceEEEcCCC--CCCh-hhHHHHHHHHhh--------------hchHHHhhhhchh-hhhcCC
Q 040099 1073 DGVEIQKLQVK---WLRQQMGVVSQEP--VLFS-DTIRANIAEMAN--------------ANGFISGLQEGYD-TLVGER 1131 (1236)
Q Consensus 1073 dG~di~~i~~~---~lR~~i~~V~Qdp--~LF~-gTIreNL~~~a~--------------~~~~i~~lp~Gld-t~vge~ 1131 (1236)
||.++...+.. .+|++++||||+| .+|. .|++||+..... +.++++.+ |++ ......
T Consensus 345 ~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~ 422 (529)
T PRK15134 345 DGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEV--GLDPETRHRY 422 (529)
T ss_pred CCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHc--CCCHHHHhcC
Confidence 99999876644 3578899999998 3665 599999963111 11122222 453 234566
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCC
Q 040099 1132 GVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQG 1208 (1236)
Q Consensus 1132 G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G 1208 (1236)
..+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|
T Consensus 423 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G 502 (529)
T PRK15134 423 PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQG 502 (529)
T ss_pred CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECC
Confidence 789999999999999999999999999999999999999999999998753 7899999999999875 9999999999
Q ss_pred EEEEecChhHHhhccC
Q 040099 1209 MIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1209 ~Ive~Gt~~eLl~~~~ 1224 (1236)
+|++.|+++++++.+.
T Consensus 503 ~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 503 EVVEQGDCERVFAAPQ 518 (529)
T ss_pred EEEEEcCHHHHhcCCC
Confidence 9999999999987533
No 73
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-72 Score=708.16 Aligned_cols=511 Identities=21% Similarity=0.310 Sum_probs=441.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHH
Q 040099 106 VSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGK 185 (1236)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 185 (1236)
+...+.+++++..++..++.+.+...+.+....|..++++++++-|++|||.+ ++|.++||+++|++.+.+.+...+..
T Consensus 860 ~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtT-P~GRILNRFSkD~~~vD~~Lp~~~~~ 938 (1381)
T KOG0054|consen 860 YLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTT-PTGRILNRFSKDIDTVDVLLPFTLEF 938 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCC-CccchhhhcccchHHHHHhhHHHHHH
Confidence 45566677778888888999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHH
Q 040099 186 FIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQ 265 (1236)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 265 (1236)
++..++.+++.++++.+..|...++++....+++.+..++.+-.|...+-.....+-+-+++.|+++|+.|||+|+.|++
T Consensus 939 ~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~r 1018 (1381)
T KOG0054|consen 939 FLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEER 1018 (1381)
T ss_pred HHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHH
Confidence 99999999999999999999988887777777777777777777777777777788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 266 ASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCL 345 (1236)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~ 345 (1236)
+.+++....+...+...-.....-++.--..++..+....+..+.... ..+.+++|.+=..+.|.+.+...+..+....
T Consensus 1019 f~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~-~~~~~~~g~vGLslsyal~lt~~l~~~vR~~ 1097 (1381)
T KOG0054|consen 1019 FIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLL-PSGLISPGLVGLSLSYALQLTGLLQWLVRQS 1097 (1381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888877766554433333333333444333332222222111 1222667877777788888888888888889
Q ss_pred HHHHHHHHHHHHHHHHhccCCCccccccC--CCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCC
Q 040099 346 SAFAAGQAAAFKFFEAINRKPEIDLCCVN--GKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSG 423 (1236)
Q Consensus 346 ~~~~~~~~s~~ri~~~l~~~~~~~~~~~~--~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sG 423 (1236)
..+.....|.||+.|+.+.++|.+..... +++..+.+|+|+|+|++.+|.++ .++|||||||+|+|||++||||++|
T Consensus 1098 ~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTG 1176 (1381)
T KOG0054|consen 1098 SELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTG 1176 (1381)
T ss_pred HHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCC
Confidence 99999999999999999977661111111 12234567999999999999643 3689999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccH
Q 040099 424 SGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANAS 503 (1236)
Q Consensus 424 sGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~ 503 (1236)
||||||++.|-|+.+|.+|+|.|||.|+.++.+++||++++++||||.||+||+|.|+--- ...+|+++|+|++.|++.
T Consensus 1177 aGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf-~e~sD~~IW~ALe~~~Lk 1255 (1381)
T KOG0054|consen 1177 AGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF-DEYSDDEIWEALERCQLK 1255 (1381)
T ss_pred CCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc-cccCHHHHHHHHHHhChH
Confidence 9999999999999999999999999999999999999999999999999999999998633 356899999999999999
Q ss_pred HHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCch
Q 040099 504 HFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLS 583 (1236)
Q Consensus 504 ~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~ 583 (1236)
+++.++|+|+|+.|.|+|.|+|-||||.+||||||+++++||+|||||+++|++|...||+.|++..+++|||.||||++
T Consensus 1256 ~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~ 1335 (1381)
T KOG0054|consen 1256 DVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLN 1335 (1381)
T ss_pred HHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhcCeEEEEECCEEEEEeCcccccccccchhhhhH
Q 040099 584 LIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 584 ~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~ 620 (1236)
|+.++|||+|||+|+|+|.|+|.+|++++++.|+++.
T Consensus 1336 TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l 1372 (1381)
T KOG0054|consen 1336 TVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLL 1372 (1381)
T ss_pred hhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHH
Confidence 9999999999999999999999999998778776444
No 74
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.2e-71 Score=624.28 Aligned_cols=533 Identities=21% Similarity=0.262 Sum_probs=471.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 64 VGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACWMITGERQAARIRSFY 143 (1236)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~ 143 (1236)
...+++.+..++....|+++-++-|.+.+..+. ..+....++.+++.++..++.+++.....+++.++...+...+
T Consensus 27 ~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~----~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v 102 (580)
T COG4618 27 GVGLFSAVINLLALTGPLYMLQVYDRVLPSRSV----PTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPV 102 (580)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 334455555666677778888899987654332 2333344555666777888999999999999999999999999
Q ss_pred HHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 040099 144 LETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGE-KVGKFIQFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAG 222 (1236)
Q Consensus 144 ~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~ 222 (1236)
|....+.+..- + ..|+=..-+ +|.++++.|++. .+..++...++.+. +.++|.+++.+.++.++...+++.+.
T Consensus 103 ~~a~~~~~l~~---~-~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P~y-l~v~fl~Hp~lG~~a~~ga~iLv~la 176 (580)
T COG4618 103 FAASFSAPLLR---R-GSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMPLY-LAVIFLFHPWLGLIALAGAIILVVLA 176 (580)
T ss_pred HHHHHhhHHhh---c-CCCccccch-hhHHHHHHHHcCCCcchhcCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998777653 2 455444444 599999999986 55556666676654 55678889999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 040099 223 VVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSA 302 (1236)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1236)
++-.+..++..++..+...+.+..+.-+..+..+|++.|+.+...++|.+.+.++.....+..-..+.+..++..+-.+.
T Consensus 177 ~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~l 256 (580)
T COG4618 177 LLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMAL 256 (580)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999999999999999999999999999999888888888888888888899
Q ss_pred HHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCCC
Q 040099 303 YGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDIR 382 (1236)
Q Consensus 303 ~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 382 (1236)
...++..|+|++++|++|.|.+++-...+.....|+......+.++..++.|.+|+.+++...|+... ..+.|..+
T Consensus 257 Qs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~ 332 (580)
T COG4618 257 QSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQ 332 (580)
T ss_pred HHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCC
Confidence 99999999999999999999999988888888899999999999999999999999999998776432 24556778
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
+.+.++++++.-|+ .++++|+|+||++++||.+|||||||||||||.|+|.|.++|.+|.|++||-|+++++.+.+-++
T Consensus 333 g~L~Ve~l~~~PPg-~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~h 411 (580)
T COG4618 333 GALSVERLTAAPPG-QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRH 411 (580)
T ss_pred ceeeEeeeeecCCC-CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccc
Confidence 99999999997665 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 463 IGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 463 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
|||.|||..||+|||+|||+=..++.+++.+.+|++.+++||.|.++|+||||.||+.|..|||||||||+||||||.||
T Consensus 412 iGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P 491 (580)
T COG4618 412 IGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDP 491 (580)
T ss_pred cCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCC
Confidence 99999999999999999998666788999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
.+++||||-|+||.+-|+.+.++|...+ +|.|+|+||||++.+..+|+|.||++|++...|+.+|.+++
T Consensus 492 ~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 492 FLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999999998886 58899999999999999999999999999999999998865
No 75
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-72 Score=688.02 Aligned_cols=449 Identities=22% Similarity=0.377 Sum_probs=349.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 462 (1236)
-|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 3899999999963 46999999999999999999999999999999999999999999999999998776554 3467
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCC---------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTH---------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~---------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
++||+|++.++.. |++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988875 999999876421 01111111 122333433 454445566678999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999999875 47899999999999875 99999999999998876554421
Q ss_pred cccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHH
Q 040099 611 NPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALL 690 (1236)
Q Consensus 611 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1236)
. +...
T Consensus 235 ~------~~~~--------------------------------------------------------------------- 239 (510)
T PRK09700 235 D------DIVR--------------------------------------------------------------------- 239 (510)
T ss_pred H------HHHH---------------------------------------------------------------------
Confidence 1 0000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 691 LGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFE 770 (1236)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~ 770 (1236)
T Consensus 240 -------------------------------------------------------------------------------- 239 (510)
T PRK09700 240 -------------------------------------------------------------------------------- 239 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 040099 771 KVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHI 850 (1236)
Q Consensus 771 ~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~ 850 (1236)
.+ +. ...
T Consensus 240 ~~-------~~---~~~--------------------------------------------------------------- 246 (510)
T PRK09700 240 LM-------VG---REL--------------------------------------------------------------- 246 (510)
T ss_pred Hh-------cC---CCc---------------------------------------------------------------
Confidence 00 00 000
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 851 QMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYA 930 (1236)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1236)
..
T Consensus 247 -----~~------------------------------------------------------------------------- 248 (510)
T PRK09700 247 -----QN------------------------------------------------------------------------- 248 (510)
T ss_pred -----cc-------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCcccc
Q 040099 931 VTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGE 1010 (1236)
Q Consensus 931 ~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~ 1010 (1236)
... ...+... .. .. ..-
T Consensus 249 -------------~~~------------------------------------------~~~~~~~--~~----~~--~~~ 265 (510)
T PRK09700 249 -------------RFN------------------------------------------AMKENVS--NL----AH--ETV 265 (510)
T ss_pred -------------ccc------------------------------------------ccccccc--cC----CC--CcE
Confidence 000 0000000 00 00 114
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh-HHHhcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV-KWLRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~-~~lR~~i 1089 (1236)
++++|+++.|. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+. ..+|+++
T Consensus 266 l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i 340 (510)
T PRK09700 266 FEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGM 340 (510)
T ss_pred EEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCc
Confidence 89999998762 27999999999999999999999999999999999999999999999999876543 4567899
Q ss_pred EEEcCCC---CCChh-hHHHHHHHHh-----------h----------hchHHHhhhhchh-hhhcCCCCCCChhHHHHH
Q 040099 1090 GVVSQEP---VLFSD-TIRANIAEMA-----------N----------ANGFISGLQEGYD-TLVGERGVQLSGGQKQRV 1143 (1236)
Q Consensus 1090 ~~V~Qdp---~LF~g-TIreNL~~~a-----------~----------~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRl 1143 (1236)
+||||++ .+|.. |++||+.-.. + +.+.++.+ |+. .........||||||||+
T Consensus 341 ~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv 418 (510)
T PRK09700 341 AYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELL--ALKCHSVNQNITELSGGNQQKV 418 (510)
T ss_pred EEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhc--CCCCCCccCccccCChHHHHHH
Confidence 9999984 57754 9999985210 0 11122221 332 223455678999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 040099 1144 AIARAIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHES 1218 (1236)
Q Consensus 1144 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~e 1218 (1236)
+|||||+.+|+|||||||||+||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.+++.+
T Consensus 419 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 419 LISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 99999999999999999999999999999999998864 47899999999998865 99999999999999987633
No 76
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.2e-72 Score=684.71 Aligned_cols=444 Identities=25% Similarity=0.381 Sum_probs=348.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 462 (1236)
-|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 3899999999963 46999999999999999999999999999999999999999999999999987655443 4578
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCC------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTH------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
++||+|++.++.. |++||+.++... .+.++..+. +.+.+..+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAE-----ADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHH-----HHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988765 999999986421 112221111 22334443 454444556678999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999998874 47899999999999865 999999999999987754433110
Q ss_pred chhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHHH
Q 040099 614 GAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLGA 693 (1236)
Q Consensus 614 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1236)
.+.
T Consensus 232 ----~~~------------------------------------------------------------------------- 234 (501)
T PRK10762 232 ----SLI------------------------------------------------------------------------- 234 (501)
T ss_pred ----HHH-------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 694 IASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVV 773 (1236)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 773 (1236)
..
T Consensus 235 ---------------------~~--------------------------------------------------------- 236 (501)
T PRK10762 235 ---------------------EM--------------------------------------------------------- 236 (501)
T ss_pred ---------------------HH---------------------------------------------------------
Confidence 00
Q ss_pred cCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 774 YMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMK 853 (1236)
Q Consensus 774 ~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~ 853 (1236)
++.. ..
T Consensus 237 -----~~~~-~~-------------------------------------------------------------------- 242 (501)
T PRK10762 237 -----MVGR-KL-------------------------------------------------------------------- 242 (501)
T ss_pred -----hcCC-Cc--------------------------------------------------------------------
Confidence 0000 00
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 854 SMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTF 933 (1236)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1236)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEE
Q 040099 934 YVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQF 1013 (1236)
Q Consensus 934 ~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f 1013 (1236)
....+.... + ...--|++
T Consensus 243 ------------------------------------------------------~~~~~~~~~------~--~~~~~l~~ 260 (501)
T PRK10762 243 ------------------------------------------------------EDQYPRLDK------A--PGEVRLKV 260 (501)
T ss_pred ------------------------------------------------------ccccccccc------C--CCCcEEEE
Confidence 000000000 0 00114788
Q ss_pred eEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh-HHHhcceEEE
Q 040099 1014 LRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV-KWLRQQMGVV 1092 (1236)
Q Consensus 1014 ~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~-~~lR~~i~~V 1092 (1236)
+|+++ .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++||
T Consensus 261 ~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v 332 (501)
T PRK10762 261 DNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYI 332 (501)
T ss_pred eCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEe
Confidence 89874 26999999999999999999999999999999999999999999999999977654 4567889999
Q ss_pred cCCC---CCCh-hhHHHHHHHHh------------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHH
Q 040099 1093 SQEP---VLFS-DTIRANIAEMA------------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAI 1149 (1236)
Q Consensus 1093 ~Qdp---~LF~-gTIreNL~~~a------------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARAL 1149 (1236)
||+| .+|. .|++||+.-.. .+.+++..+ |+. .........||||||||++|||||
T Consensus 333 ~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGekqrv~lA~al 410 (501)
T PRK10762 333 SEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLF--NIKTPSMEQAIGLLSGGNQQKVAIARGL 410 (501)
T ss_pred cCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhc--CCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 9997 3554 69999985210 011122211 342 234556678999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1150 VKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1150 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 411 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 411 MTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred hhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 99999999999999999999999999999875 47899999999999865 9999999999999999888764
No 77
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.2e-72 Score=690.20 Aligned_cols=443 Identities=25% Similarity=0.467 Sum_probs=343.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCC--CCCCcEEEEC---------------
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFY--DPQAGEVLID--------------- 447 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~--------------- 447 (1236)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 478999999952 46999999999999999999999999999999999996 7999999997
Q ss_pred --------CeecC-------CCC---HHHHhcceEEEccC-CCCCc-hhHHHHHhcCCC--CCCH----HHHHHHHHHhc
Q 040099 448 --------GVNLK-------EFQ---LKWIREKIGLVSQE-PVLLS-SSIRDNIAYGKT--HATK----EEIQAAAEAAN 501 (1236)
Q Consensus 448 --------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~l~~-~ti~~ni~~g~~--~~~~----~~~~~~~~~~~ 501 (1236)
|.++. ..+ ...+|+.++||+|+ +.+|+ .|++||+.++.. .... +++.++++..
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~- 156 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMV- 156 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-
Confidence 33321 111 12457789999998 56776 499999987521 1222 2233334444
Q ss_pred cHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEe
Q 040099 502 ASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVS 579 (1236)
Q Consensus 502 ~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~it 579 (1236)
|++........+||||||||++|||||+.+|++|||||||++||+.+.+++.+.|+++. .++|+|+||
T Consensus 157 ----------gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivt 226 (520)
T TIGR03269 157 ----------QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTS 226 (520)
T ss_pred ----------CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe
Confidence 44434445567899999999999999999999999999999999999999999999884 378999999
Q ss_pred cCchhHhh-cCeEEEEECCEEEEEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcC
Q 040099 580 HRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETE 658 (1236)
Q Consensus 580 H~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (1236)
|+++.+.. ||+|++|++|++++.|+++++... |
T Consensus 227 Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----~------------------------------------------ 260 (520)
T TIGR03269 227 HWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV----F------------------------------------------ 260 (520)
T ss_pred CCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH----H------------------------------------------
Confidence 99999865 999999999999876543221100 0
Q ss_pred CCCccccccCCCCcchhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHH
Q 040099 659 SDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVAL 738 (1236)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 738 (1236)
T Consensus 261 -------------------------------------------------------------------------------- 260 (520)
T TIGR03269 261 -------------------------------------------------------------------------------- 260 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 739 GAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTAT 818 (1236)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~ 818 (1236)
.+ .
T Consensus 261 -----------------------------------------~~--~---------------------------------- 263 (520)
T TIGR03269 261 -----------------------------------------ME--G---------------------------------- 263 (520)
T ss_pred -----------------------------------------Hh--h----------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHH
Q 040099 819 AVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKK 898 (1236)
Q Consensus 819 ~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~ 898 (1236)
+ .
T Consensus 264 ------------~------------------------~------------------------------------------ 265 (520)
T TIGR03269 264 ------------V------------------------S------------------------------------------ 265 (520)
T ss_pred ------------c------------------------h------------------------------------------
Confidence 0 0
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 899 KCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAK 978 (1236)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1236)
..
T Consensus 266 --------------------------------------------------------------------------~~---- 267 (520)
T TIGR03269 266 --------------------------------------------------------------------------EV---- 267 (520)
T ss_pred --------------------------------------------------------------------------hh----
Confidence 00
Q ss_pred HHHHHHHHHHhcccccCCCccccCccCCccccEEEeEEEEECCC--CCCcccccceeEEecCCCEEEEEcCCCCChHHHH
Q 040099 979 SSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVSFKYPT--RPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVI 1056 (1236)
Q Consensus 979 ~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~--~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~ 1056 (1236)
......+ . ...-++++||+++|++ +...++|+|+||+|++||++||+||||||||||+
T Consensus 268 ----------~~~~~~~----~------~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl 327 (520)
T TIGR03269 268 ----------EKECEVE----V------GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLS 327 (520)
T ss_pred ----------ccccccC----C------CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHH
Confidence 0000000 0 0114899999999963 1124699999999999999999999999999999
Q ss_pred HHHhcccCCCCcEEEEC-Ce---ecccCC---hHHHhcceEEEcCCCCCChh-hHHHHHHHHh-----------hhchHH
Q 040099 1057 SLLQRFYDPSSGHITLD-GV---EIQKLQ---VKWLRQQMGVVSQEPVLFSD-TIRANIAEMA-----------NANGFI 1117 (1236)
Q Consensus 1057 ~lL~r~~~~~~G~I~id-G~---di~~i~---~~~lR~~i~~V~Qdp~LF~g-TIreNL~~~a-----------~~~~~i 1117 (1236)
++|.|+++|++|+|.++ |. ++...+ ...+|++++||||++.+|.. |++||+.... .+.+++
T Consensus 328 ~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l 407 (520)
T TIGR03269 328 KIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITL 407 (520)
T ss_pred HHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999996 64 344332 23567889999999988874 9999995211 111222
Q ss_pred Hhhhhchhh-----hhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEe
Q 040099 1118 SGLQEGYDT-----LVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVA 1190 (1236)
Q Consensus 1118 ~~lp~Gldt-----~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~Ia 1190 (1236)
+.+ |++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ +.|+|+||
T Consensus 408 ~~~--~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vs 485 (520)
T TIGR03269 408 KMV--GFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVS 485 (520)
T ss_pred HhC--CCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEe
Confidence 222 3421 24556678999999999999999999999999999999999999999999988753 68999999
Q ss_pred cCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1191 HRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1191 HRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 486 Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 518 (520)
T TIGR03269 486 HDMDFVLDVCDRAALMRDGKIVKIGDPEEIVEE 518 (520)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 99999976 999999999999999999998653
No 78
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-69 Score=670.51 Aligned_cols=526 Identities=18% Similarity=0.191 Sum_probs=413.2
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 50 LLSFADLLDSVLMLVGTIAATGNGLCVPF-VALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVASFFQVACW 128 (1236)
Q Consensus 50 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (1236)
+++|.+++++. ++++++++++.+++... .|++.+.++|.... +. ..+.. ++++.++..++.+++.++.
T Consensus 4 ~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--~~----~~~~~----~~~~~~~~~~~~~~~~~~~ 72 (547)
T PRK10522 4 LRLVWRQYRWP-FISVMALSLASAALGIGLIAFINQRLIETADT--SL----LVLPE----FLGLLLLLMAVTLGSQLAL 72 (547)
T ss_pred HHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cc----hHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 34566666553 34555555555555544 46677888886432 11 11111 1122223345677888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 040099 129 MITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAFFKGWLLT 208 (1236)
Q Consensus 129 ~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 208 (1236)
.+.+.++..++|.++|+|++++|+++|+++ ++|++++|+++|++.+..++. .++.++.+++++++.++++++++|.++
T Consensus 73 ~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~ 150 (547)
T PRK10522 73 TTLGHHFVYRLRSEFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKML 150 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999999999 999999999999999998776 467888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchH---HHHHHHHHHHHHHHHHHHHHHH
Q 040099 209 LTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGE---QQASSIYNKCLVKSYKSSVQEG 285 (1236)
Q Consensus 209 l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e---~~~~~~~~~~~~~~~~~~~~~~ 285 (1236)
+++++++|+.+++..++.++.++..++.++..+++++.+.|.++|+++++ ++.+ +.+.++|++..++..+...+..
T Consensus 151 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (547)
T PRK10522 151 LVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRAD 229 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHH
Confidence 99999999999899999999999999999999999999999999999996 5544 3567888888887777766665
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 040099 286 LATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRK 365 (1236)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 365 (1236)
........+..++..+..++.+++++.. +..+.+.+..+..+.+....|+..+...+..++++..+.+|+.++++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~ 306 (547)
T PRK10522 230 TFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAP 306 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5554444433333333333334444332 1223334444444444556899999999999999999999999997654
Q ss_pred CCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE
Q 040099 366 PEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVL 445 (1236)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 445 (1236)
++.+... ....+ ..+.|+++||+|+|++ ++++|+|+||+|+|||++||+||||||||||+++|+|+|+|++|+|.
T Consensus 307 ~~~~~~~--~~~~~-~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~ 381 (547)
T PRK10522 307 YKAEFPR--PQAFP-DWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEIL 381 (547)
T ss_pred ccccccc--ccccC-cCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEE
Confidence 3321111 11111 1357999999999973 34699999999999999999999999999999999999999999999
Q ss_pred ECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 446 IDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 446 ~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
+||+|+++++.+++|++|+||+||+++|++|++|| + ++.++++++++++.+++.+++. .|+|. .+|.+||
T Consensus 382 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~LS 451 (547)
T PRK10522 382 LDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKLS 451 (547)
T ss_pred ECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCCC
Confidence 99999999999999999999999999999999999 3 3566777877777777666554 23332 1478999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhhcCeEEEEECCEEEEE-
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRNANIIAVIQQGKIVEK- 602 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~- 602 (1236)
||||||++||||++++|++||||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|.
T Consensus 452 gGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 452 KGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELT 531 (547)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEec
Confidence 999999999999999999999999999999999999999987654 47999999999999999999999999999886
Q ss_pred eCccc
Q 040099 603 GTHSE 607 (1236)
Q Consensus 603 g~~~~ 607 (1236)
|++.+
T Consensus 532 ~~~~~ 536 (547)
T PRK10522 532 GEERD 536 (547)
T ss_pred CCchh
Confidence 44433
No 79
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.1e-72 Score=606.72 Aligned_cols=466 Identities=32% Similarity=0.482 Sum_probs=363.1
Q ss_pred cEEEEeEEEECCC-CCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCCCHH
Q 040099 384 DIELKDVNFSYPA-RPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEFQLK 457 (1236)
Q Consensus 384 ~i~~~~v~f~y~~-~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~ 457 (1236)
-++++|++..|.. +....++++|||+|++||++||||+||||||-..+.++|+++. -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4788999888852 2346799999999999999999999999999999999999864 479999999999888877
Q ss_pred HHhc----ceEEEccCCC--CCch-h----HHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 458 WIRE----KIGLVSQEPV--LLSS-S----IRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 458 ~~r~----~i~~v~Q~~~--l~~~-t----i~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
.+|. +|++++|||. |-+- | +.|-|.+-+. .+..+++.+.++.+++.+- ...+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhCCcc
Confidence 7663 7999999994 2221 4 4455554321 2234556666666665432 1223445569
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEE
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIV 600 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~ 600 (1236)
||||||||+.||.||+.+|++||-||||.|||.....+|.+.|+++.+ |..+++|||++..++. ||||+||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 999999999999999999999999999999999999999999998854 7899999999999987 9999999999999
Q ss_pred EEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhh
Q 040099 601 EKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAY 680 (1236)
Q Consensus 601 ~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1236)
|+|+.++++..|...|.+..-..+. . -... +.
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll~aeP----------~--g~~~--p~---------------------------------- 269 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLLAAEP----------S--GDPP--PL---------------------------------- 269 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHHhcCC----------C--CCCC--CC----------------------------------
Confidence 9999999998887777665421100 0 0000 00
Q ss_pred hcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 681 LNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKL 760 (1236)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 760 (1236)
T Consensus 270 -------------------------------------------------------------------------------- 269 (534)
T COG4172 270 -------------------------------------------------------------------------------- 269 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 040099 761 IKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAI 840 (1236)
Q Consensus 761 ~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~ 840 (1236)
T Consensus 270 -------------------------------------------------------------------------------- 269 (534)
T COG4172 270 -------------------------------------------------------------------------------- 269 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 040099 841 FPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGL 920 (1236)
Q Consensus 841 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1236)
T Consensus 270 -------------------------------------------------------------------------------- 269 (534)
T COG4172 270 -------------------------------------------------------------------------------- 269 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccc
Q 040099 921 SFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYT 1000 (1236)
Q Consensus 921 ~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~ 1000 (1236)
T Consensus 270 -------------------------------------------------------------------------------- 269 (534)
T COG4172 270 -------------------------------------------------------------------------------- 269 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccCCccccEEEeEEEEECCCC--------CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEE
Q 040099 1001 GRTLENVMGEVQFLRVSFKYPTR--------PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITL 1072 (1236)
Q Consensus 1001 ~~~~~~~~g~I~f~~Vsf~Y~~~--------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~i 1072 (1236)
+++..--++.+||...||-+ ....+.++|||+.++||++||||.||||||||-.+|+|+.+++ |+|.+
T Consensus 270 ---~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F 345 (534)
T COG4172 270 ---PEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRF 345 (534)
T ss_pred ---CCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEE
Confidence 00000012222222222211 1234799999999999999999999999999999999999876 99999
Q ss_pred CCeecccCChHH---HhcceEEEcCCCC--CC-hhhHHHHHHHHhhhch-----------HHHhhhh-chhhhh-cCCCC
Q 040099 1073 DGVEIQKLQVKW---LRQQMGVVSQEPV--LF-SDTIRANIAEMANANG-----------FISGLQE-GYDTLV-GERGV 1133 (1236)
Q Consensus 1073 dG~di~~i~~~~---lR~~i~~V~Qdp~--LF-~gTIreNL~~~a~~~~-----------~i~~lp~-Gldt~v-ge~G~ 1133 (1236)
+|.||...+.+. +|+++-+|+|||+ |= ..||.+-|.|-..+|+ .++.|.+ |+|-.. ..-..
T Consensus 346 ~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPh 425 (534)
T COG4172 346 DGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRNRYPH 425 (534)
T ss_pred CCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhhcCCc
Confidence 999999887654 6889999999996 22 2366666643333332 2223322 555332 23457
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEE
Q 040099 1134 QLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMI 1210 (1236)
Q Consensus 1134 ~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~I 1210 (1236)
.+|||||||||||||++-+|++++||||||+||..-.++|.+.|+++- .+-+-++|+|+|..++. ||+|+||.+|+|
T Consensus 426 EFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~Gki 505 (534)
T COG4172 426 EFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKI 505 (534)
T ss_pred ccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEE
Confidence 899999999999999999999999999999999999999999998864 45699999999999987 999999999999
Q ss_pred EEecChhHHhhccCcccHH
Q 040099 1211 VEKGSHESLISTKNGIYTS 1229 (1236)
Q Consensus 1211 ve~Gt~~eLl~~~~g~y~~ 1229 (1236)
||+|+-+++++++...|.+
T Consensus 506 VE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 506 VEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred eeeCCHHHHhcCCCcHHHH
Confidence 9999999999998888865
No 80
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.4e-69 Score=670.11 Aligned_cols=522 Identities=15% Similarity=0.154 Sum_probs=428.8
Q ss_pred hhHHHhhhcC-CchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 674 SLSRLAYLNS-PEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYC 752 (1236)
Q Consensus 674 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 752 (1236)
.+++++.+.+ ++++.++++++++++.++.....++++..+++....... .....++++.++..++.++..++
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 76 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLGQ-------GSLFSFGGLCLLALLFRIGADIF 76 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777 888888888888888777777776666666542211000 01122334455566778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 753 FAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQ 832 (1236)
Q Consensus 753 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~ 832 (1236)
....+.+...++|.++|++++++|++||++ +++|++++|+++|++.++.++.. +..++..++.+++.++++++.+|.
T Consensus 77 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 153 (555)
T TIGR01194 77 PAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVP 153 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999984 78999999999999999998864 777788888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHH--HHHHHHHHHHhhHHHHHHHH
Q 040099 833 LALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEE--KVMKLYKKKCEGPIKAGIRQ 910 (1236)
Q Consensus 833 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~--~~~~~~~~~~~~~~~~~~~~ 910 (1236)
+++++++.+|+.++...+..++.++...+.++..++..+.+.|.++|++++|+|+.++ +..+++.+..++..+...+.
T Consensus 154 L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (555)
T TIGR01194 154 MFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIE 233 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999888888877777776666677777788889999999999999999999954 55778888887777766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 911 GLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQ 990 (1236)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 990 (1236)
.........+...+..+..++.++++++. +.+++|.++++..+......|+..+...+..++++..+++|+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~ 310 (555)
T TIGR01194 234 ILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGER 310 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55544444444444444444455555543 789999999999999999999999999999999999999999999764
Q ss_pred ccccCCC--ccc-cC----ccCCccccEEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhc
Q 040099 991 VSKIDSS--EYT-GR----TLENVMGEVQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQR 1061 (1236)
Q Consensus 991 ~~~~~~~--~~~-~~----~~~~~~g~I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1061 (1236)
+.+.+.. .+. .. +++...+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g 390 (555)
T TIGR01194 311 FNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCG 390 (555)
T ss_pred hccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhC
Confidence 2211110 000 00 1112346799999999998532 2369999999999999999999999999999999999
Q ss_pred ccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH------------HHhhhchHHHhhhhchhhhhc
Q 040099 1062 FYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA------------EMANANGFISGLQEGYDTLVG 1129 (1236)
Q Consensus 1062 ~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~------------~~a~~~~~i~~lp~Gldt~vg 1129 (1236)
+|+|++|+|.+||+|+++++.+++|+++++|+|||++|++|+++|+. +.+++++++..+|+||||.
T Consensus 391 ~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-- 468 (555)
T TIGR01194 391 LYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEGEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-- 468 (555)
T ss_pred CCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccccchhHHHHHHHHHHcCCchhhcccccccCCc--
Confidence 99999999999999999999999999999999999999999999862 6678889999999999994
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHH-H-cCCCeEEEEecCchhhhhcCEEEEEeC
Q 040099 1130 ERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQ-V-MVDRTTLVVAHRLSTIKNAHLIAVVSQ 1207 (1236)
Q Consensus 1130 e~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~-~-~~~~TvI~IaHRl~ti~~aD~I~Vl~~ 1207 (1236)
.+|||||||||+||||++++|+|||||||||+||++||+.+++.+.+ . .+++|+|+||||+++++.||+|+||++
T Consensus 469 ---~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~ 545 (555)
T TIGR01194 469 ---TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAA 545 (555)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEEC
Confidence 68999999999999999999999999999999999999999987643 3 368999999999999999999999999
Q ss_pred CEEEEe
Q 040099 1208 GMIVEK 1213 (1236)
Q Consensus 1208 G~Ive~ 1213 (1236)
|+|+|.
T Consensus 546 G~i~~~ 551 (555)
T TIGR01194 546 GCIVKD 551 (555)
T ss_pred CEEEEe
Confidence 999875
No 81
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.5e-71 Score=678.83 Aligned_cols=453 Identities=22% Similarity=0.383 Sum_probs=352.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHh-cc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIR-EK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r-~~ 462 (1236)
-|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 4999999999963 4699999999999999999999999999999999999999999999999999877665554 56
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCCCC--HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTHAT--KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
++||+|++.++.. |++||+.++..... ++++.++++.. |++........+||||||||++|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAAL-----------GCQLDLDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHc-----------CCCccccCChhhCCHHHHHHHHHHHHHH
Confidence 9999999988875 99999998753211 12333333333 4443445556789999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccccchhh
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYGAYN 617 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~ 617 (1236)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++... ....
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--~~~~ 234 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD--DIIQ 234 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH--HHHH
Confidence 9999999999999999999999999998875 47899999999999865 999999999999998887665421 0000
Q ss_pred hhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHHHHHHH
Q 040099 618 RLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLGAIASM 697 (1236)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (1236)
.+ . . .. .
T Consensus 235 ~~----~--~----~~--~------------------------------------------------------------- 241 (510)
T PRK15439 235 AI----T--P----AA--R------------------------------------------------------------- 241 (510)
T ss_pred HH----h--C----cc--c-------------------------------------------------------------
Confidence 00 0 0 00 0
Q ss_pred HhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 040099 698 TNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEV 777 (1236)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~ 777 (1236)
T Consensus 242 -------------------------------------------------------------------------------- 241 (510)
T PRK15439 242 -------------------------------------------------------------------------------- 241 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 040099 778 GWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKSMKG 857 (1236)
Q Consensus 778 ~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~ 857 (1236)
.....+. +
T Consensus 242 ---~~~~~~~---------~------------------------------------------------------------ 249 (510)
T PRK15439 242 ---EKSLSAS---------Q------------------------------------------------------------ 249 (510)
T ss_pred ---ccccccc---------c------------------------------------------------------------
Confidence 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 858 FSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGA 937 (1236)
Q Consensus 858 ~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 937 (1236)
T Consensus 250 -------------------------------------------------------------------------------- 249 (510)
T PRK15439 250 -------------------------------------------------------------------------------- 249 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEeEEE
Q 040099 938 KLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVS 1017 (1236)
Q Consensus 938 ~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vs 1017 (1236)
+. . .. .+........ ..--++++|++
T Consensus 250 ---------------------------------------------~~-~-~~-~~~~~~~~~~------~~~~l~~~~l~ 275 (510)
T PRK15439 250 ---------------------------------------------KL-W-LE-LPGNRRQQAA------GAPVLTVEDLT 275 (510)
T ss_pred ---------------------------------------------cc-c-cc-ccccccccCC------CCceEEEeCCC
Confidence 00 0 00 0000000000 01138889988
Q ss_pred EECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH-HhcceEEEcCCC
Q 040099 1018 FKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW-LRQQMGVVSQEP 1096 (1236)
Q Consensus 1018 f~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~-lR~~i~~V~Qdp 1096 (1236)
. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+... +|++++||||++
T Consensus 276 ~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~ 347 (510)
T PRK15439 276 G--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDR 347 (510)
T ss_pred C--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCCh
Confidence 3 1599999999999999999999999999999999999999999999999998776554 467899999996
Q ss_pred ---CCCh-hhHHHHHHHHh---------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1097 ---VLFS-DTIRANIAEMA---------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1097 ---~LF~-gTIreNL~~~a---------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
.+|. .|+.+|+.... .+.+++..+ |++ .........||||||||++|||||+.+|+||
T Consensus 348 ~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lL 425 (510)
T PRK15439 348 QSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRAL--NIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLL 425 (510)
T ss_pred hhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHc--CCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEE
Confidence 3665 49999984210 011122222 343 3345566789999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 426 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 426 IVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred EECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCH
Confidence 9999999999999999999998875 47899999999999976 99999999999999999988764
No 82
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-71 Score=678.94 Aligned_cols=446 Identities=22% Similarity=0.368 Sum_probs=345.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH-HHHhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL-KWIREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~ 462 (1236)
-|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999875543 456788
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCC-----CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTH-----ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
|+||+|++.+|.. |++||+.++... ...++..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986421 11222211 122344444 4444445566789999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYG 614 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~ 614 (1236)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.++..+....
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~--- 230 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVDR--- 230 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCCH---
Confidence 9999999999999999999999999999998875 47899999999999865 999999999999854421000000
Q ss_pred hhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHHHH
Q 040099 615 AYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLGAI 694 (1236)
Q Consensus 615 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1236)
T Consensus 231 -------------------------------------------------------------------------------- 230 (501)
T PRK11288 231 -------------------------------------------------------------------------------- 230 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 695 ASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVY 774 (1236)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 774 (1236)
+.. ...+
T Consensus 231 ---------------------------~~~--------------------------------------------~~~~-- 237 (501)
T PRK11288 231 ---------------------------DQL--------------------------------------------VQAM-- 237 (501)
T ss_pred ---------------------------HHH--------------------------------------------HHHh--
Confidence 000 0000
Q ss_pred CCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 775 MEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKS 854 (1236)
Q Consensus 775 ~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 854 (1236)
... . .
T Consensus 238 -----~~~-~--~------------------------------------------------------------------- 242 (501)
T PRK11288 238 -----VGR-E--I------------------------------------------------------------------- 242 (501)
T ss_pred -----cCC-C--c-------------------------------------------------------------------
Confidence 000 0 0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 855 MKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFY 934 (1236)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1236)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEe
Q 040099 935 VGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFL 1014 (1236)
Q Consensus 935 ~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~ 1014 (1236)
. . .....+. . . ....++++
T Consensus 243 -----------~------------------------------------~---~~~~~~~----~-~------~~~~l~~~ 261 (501)
T PRK11288 243 -----------G------------------------------------D---IYGYRPR----P-L------GEVRLRLD 261 (501)
T ss_pred -----------c------------------------------------c---ccccccc----C-C------CCcEEEEe
Confidence 0 0 0000000 0 0 01147888
Q ss_pred EEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC-hHHHhcceEEEc
Q 040099 1015 RVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ-VKWLRQQMGVVS 1093 (1236)
Q Consensus 1015 ~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~-~~~lR~~i~~V~ 1093 (1236)
|+++. .+++|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++...+ .+.+|++++|+|
T Consensus 262 ~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~ 334 (501)
T PRK11288 262 GLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCP 334 (501)
T ss_pred ccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcC
Confidence 98742 3899999999999999999999999999999999999999999999999987543 345678999999
Q ss_pred CCCC---CC-hhhHHHHHHHHh------------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHHc
Q 040099 1094 QEPV---LF-SDTIRANIAEMA------------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAIV 1150 (1236)
Q Consensus 1094 Qdp~---LF-~gTIreNL~~~a------------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARALl 1150 (1236)
|+|. +| ..|+.||+.... .+.+++..+ |++ ........+||||||||++|||||+
T Consensus 335 q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrl~la~al~ 412 (501)
T PRK11288 335 EDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSL--NIKTPSREQLIMNLSGGNQQKAILGRWLS 412 (501)
T ss_pred cCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhc--CcccCCccCccccCCHHHHHHHHHHHHHc
Confidence 9973 55 479999984110 011122221 332 2234456789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1151 KEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1151 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
.+|++|||||||++||+.+.+.+.+.|+++. .+.|+|+|||+++.+.. ||+|++|++|++++.|+++|..
T Consensus 413 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 413 EDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred cCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999999999999999999999998865 47899999999999965 9999999999999999988764
No 83
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.9e-71 Score=677.06 Aligned_cols=450 Identities=22% Similarity=0.360 Sum_probs=345.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC--CCcEEEECCeecCCCCHHH-Hhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP--QAGEVLIDGVNLKEFQLKW-IRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r~ 461 (1236)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 4699999999999999999999999999999999999987 7999999999998766544 467
Q ss_pred ceEEEccCCCCCch-hHHHHHhcCCCC------CCHHHHHHHHHHhccHHHHHhCCCCccccc-cCCCCCCChHHHHHHH
Q 040099 462 KIGLVSQEPVLLSS-SIRDNIAYGKTH------ATKEEIQAAAEAANASHFIKNLPQGLDTNV-GEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-g~~g~~LSgGqkqRia 533 (1236)
+|+||+|++.++.. |++||+.++... ...++..+ .+.+.++.+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 89999999988765 999999986421 11222211 122334443 343222 2345689999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 9999999999999999999999999999999998874 47899999999999875 999999999999866532211000
Q ss_pred ccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHH
Q 040099 612 PYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLL 691 (1236)
Q Consensus 612 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1236)
..
T Consensus 232 ------~~------------------------------------------------------------------------ 233 (500)
T TIGR02633 232 ------DI------------------------------------------------------------------------ 233 (500)
T ss_pred ------HH------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 692 GAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEK 771 (1236)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 771 (1236)
.. .
T Consensus 234 ----------------------~~-------------------------------------------------------~ 236 (500)
T TIGR02633 234 ----------------------IT-------------------------------------------------------M 236 (500)
T ss_pred ----------------------HH-------------------------------------------------------H
Confidence 00 0
Q ss_pred HhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 040099 772 VVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQ 851 (1236)
Q Consensus 772 ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~ 851 (1236)
++.. .
T Consensus 237 -------~~~~-~------------------------------------------------------------------- 241 (500)
T TIGR02633 237 -------MVGR-E------------------------------------------------------------------- 241 (500)
T ss_pred -------HhCc-c-------------------------------------------------------------------
Confidence 0000 0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 852 MKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAV 931 (1236)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1236)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccE
Q 040099 932 TFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEV 1011 (1236)
Q Consensus 932 ~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I 1011 (1236)
.. ...+.... . .. .--+
T Consensus 242 -------------~~------------------------------------------~~~~~~~~-~-----~~--~~~l 258 (500)
T TIGR02633 242 -------------IT------------------------------------------SLYPHEPH-E-----IG--DVIL 258 (500)
T ss_pred -------------cc------------------------------------------cccccccc-C-----CC--CceE
Confidence 00 00000000 0 00 1148
Q ss_pred EEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-CCcEEEECCeecccCC-hHHHhcce
Q 040099 1012 QFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-SSGHITLDGVEIQKLQ-VKWLRQQM 1089 (1236)
Q Consensus 1012 ~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-~~G~I~idG~di~~i~-~~~lR~~i 1089 (1236)
+++|++++|+..++..+|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.++|.++...+ ...+|+++
T Consensus 259 ~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i 338 (500)
T TIGR02633 259 EARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGI 338 (500)
T ss_pred EEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCC
Confidence 999999999532123589999999999999999999999999999999999995 8999999999986543 35678899
Q ss_pred EEEcCCC---CCCh-hhHHHHHHH-----Hhh------------hchHHHhhhhchhh-hhcCCCCCCChhHHHHHHHHH
Q 040099 1090 GVVSQEP---VLFS-DTIRANIAE-----MAN------------ANGFISGLQEGYDT-LVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1090 ~~V~Qdp---~LF~-gTIreNL~~-----~a~------------~~~~i~~lp~Gldt-~vge~G~~LSGGQrQRlaLAR 1147 (1236)
+||||++ .+|. .|+++|+.. ... +.++++.+ |+.. ........||||||||++|||
T Consensus 339 ~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGqkqrv~la~ 416 (500)
T TIGR02633 339 AMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRL--KVKTASPFLPIGRLSGGNQQKAVLAK 416 (500)
T ss_pred EEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhc--CccCCCccCccccCCHHHHHHHHHHH
Confidence 9999996 3665 599999852 110 11112221 2321 233455689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
||+++|++|||||||++||+.+.+.+++.|+++. ++.|+|+|||+++.+.. ||+|++|++|+++..++.+++
T Consensus 417 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 417 MLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred HHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 9999999999999999999999999999998864 47899999999999975 999999999999988765543
No 84
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.3e-69 Score=708.12 Aligned_cols=220 Identities=24% Similarity=0.434 Sum_probs=187.2
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
..|+++|+++.|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|++
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 469999999999632 3579999999999999999999999999999999999999999999999999864 45667889
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
+|||||++.+|+. |++|||.++.. ....++.++ .+++.++.+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999875 99999987521 112222211 112233333 4555556667799999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
.+|+|||||||||+||+.+++.+++.|+++.+|+|+|++||+++.+.. ||||++|++|++++.|+.++|.++
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999998778999999999999975 999999999999999999998765
No 85
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-71 Score=673.34 Aligned_cols=443 Identities=20% Similarity=0.345 Sum_probs=344.7
Q ss_pred EEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH-HHHhcceEE
Q 040099 387 LKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL-KWIREKIGL 465 (1236)
Q Consensus 387 ~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~ 465 (1236)
++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..++++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 4689999963 469999999999999999999999999999999999999999999999999876554 445778999
Q ss_pred EccCCCCCc-hhHHHHHhcCCCC-----CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 466 VSQEPVLLS-SSIRDNIAYGKTH-----ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 466 v~Q~~~l~~-~ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
|+|++.++. .|++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998775 5999999986421 12222211 123344444 5555566677899999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccccchhh
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYGAYN 617 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~ 617 (1236)
.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998875 47899999999999865 999999999999987764432100
Q ss_pred hhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHHHHHHH
Q 040099 618 RLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLGAIASM 697 (1236)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (1236)
+..
T Consensus 225 ~~~----------------------------------------------------------------------------- 227 (491)
T PRK10982 225 KII----------------------------------------------------------------------------- 227 (491)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 000
Q ss_pred HhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 040099 698 TNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEV 777 (1236)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~ 777 (1236)
. .+
T Consensus 228 -----------------~-------------------------------------------------------~~----- 230 (491)
T PRK10982 228 -----------------A-------------------------------------------------------MM----- 230 (491)
T ss_pred -----------------H-------------------------------------------------------HH-----
Confidence 0 00
Q ss_pred ccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 040099 778 GWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKSMKG 857 (1236)
Q Consensus 778 ~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~ 857 (1236)
+.. .
T Consensus 231 --~~~-~------------------------------------------------------------------------- 234 (491)
T PRK10982 231 --VGR-S------------------------------------------------------------------------- 234 (491)
T ss_pred --hCC-C-------------------------------------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 858 FSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGA 937 (1236)
Q Consensus 858 ~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 937 (1236)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEeEEE
Q 040099 938 KLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVS 1017 (1236)
Q Consensus 938 ~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vs 1017 (1236)
. .. ..+.. . . .+ ....|+++|++
T Consensus 235 -------~------------------------------------~~-----~~~~~-~--~----~~--~~~~i~~~~l~ 257 (491)
T PRK10982 235 -------L------------------------------------TQ-----RFPDK-E--N----KP--GEVILEVRNLT 257 (491)
T ss_pred -------c------------------------------------cc-----ccccc-c--C----CC--CCcEEEEeCcc
Confidence 0 00 00000 0 0 00 01148999999
Q ss_pred EECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH-HHhcceEEEcCCC
Q 040099 1018 FKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK-WLRQQMGVVSQEP 1096 (1236)
Q Consensus 1018 f~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~-~lR~~i~~V~Qdp 1096 (1236)
++|. ++|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++|+||++
T Consensus 258 ~~~~-----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~ 332 (491)
T PRK10982 258 SLRQ-----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEER 332 (491)
T ss_pred cccC-----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCch
Confidence 9752 489999999999999999999999999999999999999999999999999876643 4578899999996
Q ss_pred C---CCh-hhHHHH-----HHHHh---h----------hchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1097 V---LFS-DTIRAN-----IAEMA---N----------ANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1097 ~---LF~-gTIreN-----L~~~a---~----------~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
. +|. .|+.+| +.... + +.+++..+ |+. -.......+||||||||++||||++++|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p 410 (491)
T PRK10982 333 RSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSM--RVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQP 410 (491)
T ss_pred hhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhc--CccCCCcccccccCCcHHHHHHHHHHHHhcCC
Confidence 3 555 477666 32111 1 11122222 231 1235566789999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
+||||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||++++|++|+++..++.+++
T Consensus 411 ~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 411 EILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred CEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccC
Confidence 9999999999999999999999998764 57899999999999965 999999999999988876544
No 86
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.7e-69 Score=602.16 Aligned_cols=511 Identities=22% Similarity=0.263 Sum_probs=446.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 040099 699 NGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVG 778 (1236)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ 778 (1236)
-.+.....+.++.+..|-...+.+ .........+.+.+.++..++..++..++.+.+.++..+++..+|...++++..
T Consensus 35 INiL~L~~~lyMLQVyDRVL~S~s--~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~ 112 (580)
T COG4618 35 INLLALTGPLYMLQVYDRVLPSRS--VPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLL 112 (580)
T ss_pred HHHHHHhhhHHHHHHHhhhccCCC--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHh
Confidence 334444445555555555443221 112223334444556667788899999999999999999999999999766654
Q ss_pred cccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 040099 779 WFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKSMKGF 858 (1236)
Q Consensus 779 ~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~ 858 (1236)
- +..|+=..- -+|.++++.+++..-...+...-.+-+.+.+.|.++++++++.++...+++.+.++..+..++.
T Consensus 113 ~-----~~~g~~~Q~-LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p 186 (580)
T COG4618 113 R-----RGSGDGLQP-LRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKP 186 (580)
T ss_pred h-----cCCCccccc-hhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3 223332222 3799999999988666666666666666777888999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 859 SANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAK 938 (1236)
Q Consensus 859 ~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 938 (1236)
.++..+...+.+.+...+.+|.++|+++|+.....++|.+....+...+.+..-..+...+++..+-+..+..++.+|+|
T Consensus 187 ~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~ 266 (580)
T COG4618 187 LKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAW 266 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccee
Confidence 88888888889999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEeEEEE
Q 040099 939 LVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVSF 1018 (1236)
Q Consensus 939 lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf 1018 (1236)
|+..|++|.|.+++-.........|+......|..+..++.+..|+.++++..|...+ ..+.|..+|.+..+++++
T Consensus 267 Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~g~L~Ve~l~~ 342 (580)
T COG4618 267 LVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQGALSVERLTA 342 (580)
T ss_pred eEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCCceeeEeeeee
Confidence 9999999999999998889999999999999999999999999999999987665432 234566789999999999
Q ss_pred ECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCC
Q 040099 1019 KYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVL 1098 (1236)
Q Consensus 1019 ~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~L 1098 (1236)
.-|+. ++++|+|+||+++|||-+|||||||||||||.++|.|.++|.+|+|.+||.|+++++.+++-++|||.|||..|
T Consensus 343 ~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeL 421 (580)
T COG4618 343 APPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVEL 421 (580)
T ss_pred cCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCccccee
Confidence 87765 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCC
Q 040099 1099 FSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATS 1163 (1236)
Q Consensus 1099 F~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTS 1163 (1236)
|+|||+|||+ +.|++||.|.++|+||||.||++|..|||||||||+|||||+.||.+++||||.|
T Consensus 422 F~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNs 501 (580)
T COG4618 422 FDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNS 501 (580)
T ss_pred cCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCC
Confidence 9999999995 6789999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1164 ALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1164 aLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||.+-|+.+.++|.+.. +|+|+|+||||++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 502 NLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 502 NLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred CcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999998865 68999999999999999999999999999999999999886
No 87
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=8.5e-70 Score=664.47 Aligned_cols=445 Identities=22% Similarity=0.285 Sum_probs=341.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 4 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 4 LQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred EEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 899999999963 35999999999999999999999999999999999999999999999998887666666777899
Q ss_pred EEccCCCC--C-------chhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 465 LVSQEPVL--L-------SSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 465 ~v~Q~~~l--~-------~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
|++|++.+ + ..|++||+.++. ..++++.++++..++.+. ......+||||||||++||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV--KDPARCEQLAQQFGITAL-----------LDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch--hHHHHHHHHHHHcCCHhh-----------hhCCcccCCHHHHHHHHHH
Confidence 99998743 2 358999987542 123445555555554433 3444568999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|+++..|+.+++...+
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~- 226 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA- 226 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch-
Confidence 999999999999999999999999999999998754 6899999999999866 9999999999999888765543210
Q ss_pred chhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHHH
Q 040099 614 GAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLGA 693 (1236)
Q Consensus 614 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1236)
...++..
T Consensus 227 -~~~~~~~------------------------------------------------------------------------ 233 (490)
T PRK10938 227 -LVAQLAH------------------------------------------------------------------------ 233 (490)
T ss_pred -hhhhhhh------------------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040099 694 IASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVV 773 (1236)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 773 (1236)
. +++
T Consensus 234 ---------------------------~------------------------------------------------~~~- 237 (490)
T PRK10938 234 ---------------------------S------------------------------------------------EQL- 237 (490)
T ss_pred ---------------------------h------------------------------------------------hcc-
Confidence 0 000
Q ss_pred cCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 774 YMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMK 853 (1236)
Q Consensus 774 ~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~ 853 (1236)
... ..+.
T Consensus 238 ------~~~-~~~~------------------------------------------------------------------ 244 (490)
T PRK10938 238 ------EGV-QLPE------------------------------------------------------------------ 244 (490)
T ss_pred ------Ccc-ccCc------------------------------------------------------------------
Confidence 000 0000
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 854 SMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTF 933 (1236)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1236)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEE
Q 040099 934 YVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQF 1013 (1236)
Q Consensus 934 ~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f 1013 (1236)
.. .+.... .. . ....-|++
T Consensus 245 ------------------------------------------------------~~-~~~~~~-~~---~--~~~~~l~~ 263 (490)
T PRK10938 245 ------------------------------------------------------PD-EPSARH-AL---P--ANEPRIVL 263 (490)
T ss_pred ------------------------------------------------------cc-cccccc-cc---C--CCCceEEE
Confidence 00 000000 00 0 00124899
Q ss_pred eEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-CCcEEEECCeeccc-CChHHHhcceEE
Q 040099 1014 LRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-SSGHITLDGVEIQK-LQVKWLRQQMGV 1091 (1236)
Q Consensus 1014 ~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-~~G~I~idG~di~~-i~~~~lR~~i~~ 1091 (1236)
+|++++|+++ .+|+|+||+|++||++||+||||||||||+++|.|+.+| ++|+|+++|.++.. .+...+|++++|
T Consensus 264 ~~l~~~~~~~---~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 340 (490)
T PRK10938 264 NNGVVSYNDR---PILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGY 340 (490)
T ss_pred eceEEEECCe---eEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceE
Confidence 9999999743 489999999999999999999999999999999999876 69999999987632 233457889999
Q ss_pred EcCCCCCCh---hhHHHHHHHHh----------------hhchHHHhhhhchhh-hhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1092 VSQEPVLFS---DTIRANIAEMA----------------NANGFISGLQEGYDT-LVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1092 V~Qdp~LF~---gTIreNL~~~a----------------~~~~~i~~lp~Gldt-~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
++|++.++. .|+++++.... .+.+.++.+ |++. ........||||||||++|||||++
T Consensus 341 v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~la~al~~ 418 (490)
T PRK10938 341 VSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDIL--GIDKRTADAPFHSLSWGQQRLALIVRALVK 418 (490)
T ss_pred ECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHc--CCchhhccCchhhCCHHHHHHHHHHHHHhc
Confidence 999986642 36776653110 011122221 4544 4455667899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHcC-C-CeEEEEecCchhhhh--cCEEEEEeCCEEEEec
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVMV-D-RTTLVVAHRLSTIKN--AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~-~TvI~IaHRl~ti~~--aD~I~Vl~~G~Ive~G 1214 (1236)
+|+||||||||++||+.+.+.+.+.|+++.+ + .|+|+|||+++.+.. ||++++|++|+|++.-
T Consensus 419 ~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 419 HPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 9999999999999999999999999998753 3 469999999999964 7999999999998754
No 88
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.4e-67 Score=660.39 Aligned_cols=531 Identities=15% Similarity=0.119 Sum_probs=448.0
Q ss_pred hHHHHHHhhchhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhhHHHHHHHHHHHHHHHHHHH
Q 040099 46 PFHKLLSFADLLDS----VLMLVGTIAATGNGLCVPFVALLFGDLMDSIGQNATKTLAIHGVLKVSKKFVYLALGAGVAS 121 (1236)
Q Consensus 46 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (1236)
.++++++|++||++ ..+++.+++.++.+++....|++.+.++|.+... +...+...+..++++++++.++..+..
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~-~~~~f~~~l~~~~l~~~~~~~~~~~~~ 156 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRR-SPRNFAWILFKWFLIAPPASFINSAIK 156 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36678888988865 2456667777778888889999999999987643 221222223333444455556667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 122 FFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFIQFGASFIGGFLIAF 201 (1236)
Q Consensus 122 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (1236)
|+..++......++..++|..+|++....++.+||+ ++|++++|+++|++.+.+.+...+..++..++.+++.+++++
T Consensus 157 ~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~ 234 (659)
T TIGR00954 157 YLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLL 234 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888999999999999999999999999985 689999999999999999999999999999999998888788
Q ss_pred H-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 040099 202 F-KGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKS 280 (1236)
Q Consensus 202 ~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~ 280 (1236)
. ++|.+++++++.+|+.+++..++.+++.+..++.++..+++++.++|.++|+++||+|+.|+.+.++|++..++..+.
T Consensus 235 ~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~ 314 (659)
T TIGR00954 235 TALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEH 314 (659)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 6 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHH--HHHHHHHHHHHHHH-h----cCcChhHHHH-HHHH---HHHHHHHHHHHHHHHHHHH
Q 040099 281 SVQEGLATGLGLGASVFIIFS--AYGLGVWYGAKLIL-E----KGYSGGDVMS-VIFG---VLIGSMSLGQASPCLSAFA 349 (1236)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~v~-~----g~~t~g~~~~-~~~~---~~~~~~~l~~~~~~~~~~~ 349 (1236)
..+..+..+...++..++... ..++.++.|...+. + |.+|.|.+++ |+.+ +.....|+..+...+..++
T Consensus 315 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~ 394 (659)
T TIGR00954 315 LNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMT 394 (659)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888877653 23333334443332 2 7899998877 5544 4455789999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcccc--------c-cCC-------------CCCCCCCCcEEEEeEEEECCCCCCCcccccee
Q 040099 350 AGQAAAFKFFEAINRKPEIDLC--------C-VNG-------------KKLDDIRGDIELKDVNFSYPARPDEQILNGFC 407 (1236)
Q Consensus 350 ~~~~s~~ri~~~l~~~~~~~~~--------~-~~~-------------~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~ 407 (1236)
++.++.+|++++++.+++.+.. . .+. .......+.|+++||+|+|++ ++++|+|+|
T Consensus 395 ~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~is 472 (659)
T TIGR00954 395 RLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecce
Confidence 9999999999999864432100 0 000 001112356999999999973 346999999
Q ss_pred EEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCC--
Q 040099 408 LLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGK-- 485 (1236)
Q Consensus 408 ~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~-- 485 (1236)
|+|++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||+|+|++|++|++|||.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999874 56899999999999999999999974
Q ss_pred -----CCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHH
Q 040099 486 -----THATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGR 560 (1236)
Q Consensus 486 -----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~ 560 (1236)
+..++++++++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 33567889999999999999988 999999986 56799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCceEEEEecCchhHhhcCeEEEEEC
Q 040099 561 MVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQ 596 (1236)
Q Consensus 561 ~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~ 596 (1236)
.+.+.+++. ++|+|+||||+++++.||+|++|+.
T Consensus 620 ~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999874 8999999999999999999999973
No 89
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-68 Score=713.24 Aligned_cols=204 Identities=23% Similarity=0.374 Sum_probs=175.8
Q ss_pred cEEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC---CCCcEEEECCeecccCChHHH
Q 040099 1010 EVQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD---PSSGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~---~~~G~I~idG~di~~i~~~~l 1085 (1236)
.++++||++.|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|++||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 378999999996322 3469999999999999999999999999999999999997 78899999999985 257
Q ss_pred hcceEEEcCCCC-CChhhHHHHHHHHhh---------------hchHHH--hhhhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1086 RQQMGVVSQEPV-LFSDTIRANIAEMAN---------------ANGFIS--GLQEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1086 R~~i~~V~Qdp~-LF~gTIreNL~~~a~---------------~~~~i~--~lp~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
|++++||+|++. ++..||||||.-.+. +.+.++ .+.+..|+.+|+.|.+||||||||++|||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGqrqRl~Ia~ 914 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLTIGV 914 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHHhhHHHHHH
Confidence 899999999875 556799999962221 122333 23456789999888899999999999999
Q ss_pred HHccCCC-EEEEecCCCCCCHHHHHHHHHHHHHH-cCCCeEEEEecCchhh--hhcCEEEEEeCC-EEEEecChh
Q 040099 1148 AIVKEPK-ILLLDEATSALDIESERVVQDALDQV-MVDRTTLVVAHRLSTI--KNAHLIAVVSQG-MIVEKGSHE 1217 (1236)
Q Consensus 1148 ALlr~p~-ILlLDEaTSaLD~~te~~I~~~L~~~-~~~~TvI~IaHRl~ti--~~aD~I~Vl~~G-~Ive~Gt~~ 1217 (1236)
||+.+|+ ||+||||||+||+.+...|++.|++. .+|+|+|+++|+++.. ..+|+|++|++| ++++.|++.
T Consensus 915 aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 915 ELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 9999997 99999999999999999999999987 4679999999999974 569999999997 999999974
No 90
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-69 Score=661.72 Aligned_cols=475 Identities=22% Similarity=0.392 Sum_probs=337.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. .+|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999963 46999999999999999999999999999999999999999999999872 4699
Q ss_pred EEccCCCCCch-hHHHHHhcCCCCC----------------CHH---HHHHH----------HHHhccHHHHHhCCCCcc
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKTHA----------------TKE---EIQAA----------AEAANASHFIKNLPQGLD 514 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~l~~g~~ 514 (1236)
|++|++.+|.. |++||+.++.... ..+ .+.+. .....+.+.+..+ |++
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988765 9999998753100 000 00000 0011223444444 554
Q ss_pred ccc-cCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEE
Q 040099 515 TNV-GEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIA 592 (1236)
Q Consensus 515 t~~-g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~ 592 (1236)
... .....+||||||||++|||||+.+|++|||||||++||+.+..++.+.|.+ .+.|+|+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 322 345678999999999999999999999999999999999999999999975 47899999999999865 99999
Q ss_pred EEECCEEE-EEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCC
Q 040099 593 VIQQGKIV-EKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPP 671 (1236)
Q Consensus 593 vl~~G~i~-~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1236)
+|++|+++ +.|+++++++.....+....+.. ..
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~------~~---------------------------------------- 257 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERLLADN------AK---------------------------------------- 257 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHHHHH------HH----------------------------------------
Confidence 99999994 77877765432000000000000 00
Q ss_pred cchhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 672 DVSLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMY 751 (1236)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 751 (1236)
. ..+ ..
T Consensus 258 -----------------------------------------~-------~~~-~~------------------------- 263 (530)
T PRK15064 258 -----------------------------------------K-------KAQ-IA------------------------- 263 (530)
T ss_pred -----------------------------------------H-------HHH-HH-------------------------
Confidence 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 040099 752 CFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACW 831 (1236)
Q Consensus 752 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~ 831 (1236)
+++. ...+. . ..
T Consensus 264 -----------~~~~-~~~~~--------~--~~---------------------------------------------- 275 (530)
T PRK15064 264 -----------ELQS-FVSRF--------S--AN---------------------------------------------- 275 (530)
T ss_pred -----------HHHH-HHHHh--------h--cc----------------------------------------------
Confidence 0000 00000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHH
Q 040099 832 QLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQG 911 (1236)
Q Consensus 832 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1236)
.... ...
T Consensus 276 ---------------------------~~~~-----------------------------------------~~~----- 282 (530)
T PRK15064 276 ---------------------------ASKA-----------------------------------------KQA----- 282 (530)
T ss_pred ---------------------------chhh-----------------------------------------HHH-----
Confidence 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Q 040099 912 LMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGL-IDQ 990 (1236)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~-~~~ 990 (1236)
.....++.+. ...
T Consensus 283 ------------------------------------------------------------------~~~~~~~~~~~~~~ 296 (530)
T PRK15064 283 ------------------------------------------------------------------TSRAKQIDKIKLEE 296 (530)
T ss_pred ------------------------------------------------------------------HHHHHHHhhccccc
Confidence 0000000000 000
Q ss_pred cccc-CCCccc--cCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCC
Q 040099 991 VSKI-DSSEYT--GRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSS 1067 (1236)
Q Consensus 991 ~~~~-~~~~~~--~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~ 1067 (1236)
.+.. ...... ..........|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~ 373 (530)
T PRK15064 297 VKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDNG---PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDS 373 (530)
T ss_pred cCCccccCceeeCCCCCCCCCceEEEEeeEEeeCCc---eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 0000 000000 00000012259999999999743 58999999999999999999999999999999999999999
Q ss_pred cEEEECCeecccCChHHHhcceEEEcCCCC--CCh-hhHHHHHHHHh-------hhchHHHhhhhchh-hhhcCCCCCCC
Q 040099 1068 GHITLDGVEIQKLQVKWLRQQMGVVSQEPV--LFS-DTIRANIAEMA-------NANGFISGLQEGYD-TLVGERGVQLS 1136 (1236)
Q Consensus 1068 G~I~idG~di~~i~~~~lR~~i~~V~Qdp~--LF~-gTIreNL~~~a-------~~~~~i~~lp~Gld-t~vge~G~~LS 1136 (1236)
|+|.++| +++++||||++. ++. .|+++|+.... .+.+.+..+ |+. ........+||
T Consensus 374 G~i~~~~-----------~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS 440 (530)
T PRK15064 374 GTVKWSE-----------NANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRL--LFSQDDIKKSVKVLS 440 (530)
T ss_pred eEEEECC-----------ceEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHc--CCChhHhcCcccccC
Confidence 9999997 257999999974 443 59999985221 112222222 332 34556778999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEE-Eec
Q 040099 1137 GGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIV-EKG 1214 (1236)
Q Consensus 1137 GGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Iv-e~G 1214 (1236)
||||||++||||++++|+||||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. ||+|++|++|+++ +.|
T Consensus 441 gGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g 518 (530)
T PRK15064 441 GGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSG 518 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCC
Confidence 99999999999999999999999999999999999999999886 5699999999999976 9999999999998 789
Q ss_pred ChhHHhhc
Q 040099 1215 SHESLIST 1222 (1236)
Q Consensus 1215 t~~eLl~~ 1222 (1236)
++++++..
T Consensus 519 ~~~~~~~~ 526 (530)
T PRK15064 519 TYEEYLRS 526 (530)
T ss_pred CHHHHHHH
Confidence 99998875
No 91
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.6e-65 Score=632.20 Aligned_cols=522 Identities=18% Similarity=0.169 Sum_probs=399.2
Q ss_pred hcCCchHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 681 LNSPEVPALLLGAIASMTNGIIIPI-FGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCK 759 (1236)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 759 (1236)
+.++.++.++++++++++..++... .+++...+++..... .. ....++++.++..++.++..+...+.+.+
T Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (547)
T PRK10522 7 VWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS----LL----VLPEFLGLLLLLMAVTLGSQLALTTLGHH 78 (547)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc----ch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555666666666655555444 244455555543210 00 11112222333345667788888999999
Q ss_pred HHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 040099 760 LIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLA 839 (1236)
Q Consensus 760 ~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~ 839 (1236)
+..++|.++|++++++|++||+ ++++|++++|+++|++.+...+. .+..++..++.+++.++++++++|.+++++++
T Consensus 79 ~~~~lR~~l~~~ll~~~~~~~~--~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 79 FVYRLRSEFIKRILDTHVERIE--QLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHhCCHHHHh--ccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999998 48899999999999999998765 46777888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccH---HHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040099 840 IFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAE---EKVMKLYKKKCEGPIKAGIRQGLMSGI 916 (1236)
Q Consensus 840 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1236)
.+|+.+++.++..++.++..++.++..++..+.+.|.++|+++++ ++.+ +.+.++|.+..++..+...+.......
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLS 234 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHH
Confidence 999988888888888777778888888899999999999999995 5443 456778888777776665554444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Q 040099 917 GFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDS 996 (1236)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~ 996 (1236)
...+...+.....++.++++... +..+.+.+..+..+......|+..+...+..+..+..+.+|+.++.+.+++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~ 311 (547)
T PRK10522 235 AVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF 311 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 33333222222223333333322 112333333333334445678999999999999999999999998754332211
Q ss_pred CccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCee
Q 040099 997 SEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVE 1076 (1236)
Q Consensus 997 ~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~d 1076 (1236)
++ ..+.+..+.|+++||+|+||++ .++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|
T Consensus 312 ~~---~~~~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~ 386 (547)
T PRK10522 312 PR---PQAFPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKP 386 (547)
T ss_pred cc---ccccCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEE
Confidence 11 1111113579999999999853 369999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHhcceEEEcCCCCCChhhHHHHH--HHHhhhchHHHhhhhchhhhhcCC---CCCCChhHHHHHHHHHHHcc
Q 040099 1077 IQKLQVKWLRQQMGVVSQEPVLFSDTIRANI--AEMANANGFISGLQEGYDTLVGER---GVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1077 i~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL--~~~a~~~~~i~~lp~Gldt~vge~---G~~LSGGQrQRlaLARALlr 1151 (1236)
+++++.+++|+++++|||||++|++|+++|- .....+.++++.++-+.++..+++ |.+||||||||++||||+++
T Consensus 387 ~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgGq~qRl~lARal~~ 466 (547)
T PRK10522 387 VTAEQPEDYRKLFSAVFTDFHLFDQLLGPEGKPANPALVEKWLERLKMAHKLELEDGRISNLKLSKGQKKRLALLLALAE 466 (547)
T ss_pred CCCCCHHHHhhheEEEecChhHHHHhhccccCchHHHHHHHHHHHcCCchhhhccccCCCCCCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999982 123345567777766666555554 78999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEEe-cChhHHhhc
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEK-GSHESLIST 1222 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~-Gt~~eLl~~ 1222 (1236)
+|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|. |++.+-..+
T Consensus 467 ~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~~~~~~ 540 (547)
T PRK10522 467 ERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERDAASR 540 (547)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCchhhhhh
Confidence 999999999999999999999999997654 47999999999999999999999999999988 666665544
No 92
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.6e-67 Score=645.80 Aligned_cols=475 Identities=23% Similarity=0.377 Sum_probs=334.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----------~~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----------GIKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 25699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCC----------------CCH----------HHHHHHHHHh-------ccHHHHHhC
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTH----------------ATK----------EEIQAAAEAA-------NASHFIKNL 509 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~----------------~~~----------~~~~~~~~~~-------~~~~~i~~l 509 (1236)
|||+|+|.+++. |++||+.++... ... .++.+.++.+ .+.+.+..+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999875 999999875310 000 0111111111 122333333
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-c
Q 040099 510 PQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-A 588 (1236)
Q Consensus 510 ~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-a 588 (1236)
|++ .......+||||||||++|||||+.+|++||||||||+||+.+..++.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 443 2455667899999999999999999999999999999999999999999998873 599999999999976 9
Q ss_pred CeEEEEECCEEE-EEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCcccccc
Q 040099 589 NIIAVIQQGKIV-EKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKA 667 (1236)
Q Consensus 589 d~i~vl~~G~i~-~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (1236)
|+|++|++|+++ ..|+++++.+.. . .-...+. ...
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~-~---~~~~~~~--~~~-------------------------------------- 263 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQK-A---KRLAQEE--KQE-------------------------------------- 263 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHH-H---HHHHHHH--HHH--------------------------------------
Confidence 999999999986 667766554320 0 0000000 000
Q ss_pred CCCCcchhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHH
Q 040099 668 KMPPDVSLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSP 747 (1236)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 747 (1236)
+.
T Consensus 264 ------------------------------------------------------~~------------------------ 265 (556)
T PRK11819 264 ------------------------------------------------------AA------------------------ 265 (556)
T ss_pred ------------------------------------------------------HH------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 748 LSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAF 827 (1236)
Q Consensus 748 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~ 827 (1236)
.+..+ .++ ..|.+. .+.+
T Consensus 266 ----------------~~~~~-~~~----~~~~~~--~~~~--------------------------------------- 283 (556)
T PRK11819 266 ----------------RQKAL-KRE----LEWVRQ--SPKA--------------------------------------- 283 (556)
T ss_pred ----------------HHHHH-HHH----HHHHHH--hhhh---------------------------------------
Confidence 00000 000 000000 0000
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHH
Q 040099 828 KACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAG 907 (1236)
Q Consensus 828 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~ 907 (1236)
+. . .. ....
T Consensus 284 -------------------------~~----~-~~---------------------------~~~~-------------- 292 (556)
T PRK11819 284 -------------------------RQ----A-KS---------------------------KARL-------------- 292 (556)
T ss_pred -------------------------hH----H-HH---------------------------HHHH--------------
Confidence 00 0 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 908 IRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGL 987 (1236)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 987 (1236)
...++..+
T Consensus 293 -----------------------------------------------------------------------~~~~~~~~- 300 (556)
T PRK11819 293 -----------------------------------------------------------------------ARYEELLS- 300 (556)
T ss_pred -----------------------------------------------------------------------HHHHHhhc-
Confidence 00000000
Q ss_pred HhcccccCC-Ccc-ccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC
Q 040099 988 IDQVSKIDS-SEY-TGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP 1065 (1236)
Q Consensus 988 ~~~~~~~~~-~~~-~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~ 1065 (1236)
..+...+. ... ..........-++++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|
T Consensus 301 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~---~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p 376 (556)
T PRK11819 301 -EEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGDR---LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP 376 (556)
T ss_pred -ccccccCCCceeecCCCCCCCCeEEEEEeEEEEECCe---eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 00000000 000 000000112259999999999743 589999999999999999999999999999999999999
Q ss_pred CCcEEEECCeecccCChHHHhcceEEEcCCC-CCCh-hhHHHHHHHHhh----------hchHHHhhhhchhh-hhcCCC
Q 040099 1066 SSGHITLDGVEIQKLQVKWLRQQMGVVSQEP-VLFS-DTIRANIAEMAN----------ANGFISGLQEGYDT-LVGERG 1132 (1236)
Q Consensus 1066 ~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp-~LF~-gTIreNL~~~a~----------~~~~i~~lp~Gldt-~vge~G 1132 (1236)
++|+|.+++ ++ +|+||||++ .++. .|++||+..... ....+..+ |+.. ......
T Consensus 377 ~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~ 443 (556)
T PRK11819 377 DSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRF--NFKGGDQQKKV 443 (556)
T ss_pred CCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhC--CCChhHhcCch
Confidence 999999964 21 599999997 5654 499999852211 11122221 3322 234556
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeC-CEE
Q 040099 1133 VQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQ-GMI 1210 (1236)
Q Consensus 1133 ~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~-G~I 1210 (1236)
..||||||||++||||++.+|++|||||||++||+.+...+.+.|++. . .|+|+|||+++.+.. ||+|++|++ |++
T Consensus 444 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~ 521 (556)
T PRK11819 444 GVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQV 521 (556)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeE
Confidence 789999999999999999999999999999999999999999999986 3 499999999999876 999999986 888
Q ss_pred EE-ecChhHHhhc
Q 040099 1211 VE-KGSHESLIST 1222 (1236)
Q Consensus 1211 ve-~Gt~~eLl~~ 1222 (1236)
.+ .|+++++++.
T Consensus 522 ~~~~g~~~~~~~~ 534 (556)
T PRK11819 522 EWFEGNFQEYEED 534 (556)
T ss_pred EEecCCHHHHHHH
Confidence 74 7899888765
No 93
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.2e-66 Score=637.93 Aligned_cols=475 Identities=24% Similarity=0.365 Sum_probs=335.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-++++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 3899999999962 24699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCC-----------------C-C--------HHHHHHHHHHhccH-------HHHHhC
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTH-----------------A-T--------KEEIQAAAEAANAS-------HFIKNL 509 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~-----------------~-~--------~~~~~~~~~~~~~~-------~~i~~l 509 (1236)
|||+|++.+++. |++|||.++... . . .+++.++++.++.+ +.+..+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998864 999999875310 0 0 11233444444432 233333
Q ss_pred CCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-c
Q 040099 510 PQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-A 588 (1236)
Q Consensus 510 ~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-a 588 (1236)
|++. ......+||||||||++|||||+.+|++|||||||++||+.+..++.+.|+++ ++|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4422 35566789999999999999999999999999999999999999999999876 3699999999999976 9
Q ss_pred CeEEEEECCEEE-EEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCcccccc
Q 040099 589 NIIAVIQQGKIV-EKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKA 667 (1236)
Q Consensus 589 d~i~vl~~G~i~-~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (1236)
|+|++|++|+++ ..|+++++++.. ..+. ..... .
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~--------~~~~-~~~~~--~---------------------------------- 260 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQK--------EKRL-EQEEK--E---------------------------------- 260 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHH--------HHHH-HHHHH--H----------------------------------
Confidence 999999999975 667766554320 0000 00000 0
Q ss_pred CCCCcchhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHH
Q 040099 668 KMPPDVSLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSP 747 (1236)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 747 (1236)
.+.
T Consensus 261 -----------------------------------------------------~~~------------------------ 263 (552)
T TIGR03719 261 -----------------------------------------------------ESA------------------------ 263 (552)
T ss_pred -----------------------------------------------------HHH------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 748 LSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAF 827 (1236)
Q Consensus 748 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~ 827 (1236)
....+ .+.
T Consensus 264 ----------------~~~~~-----------------------~~~--------------------------------- 271 (552)
T TIGR03719 264 ----------------RQKAL-----------------------KRE--------------------------------- 271 (552)
T ss_pred ----------------HHHHH-----------------------HHH---------------------------------
Confidence 00000 000
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHH
Q 040099 828 KACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAG 907 (1236)
Q Consensus 828 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~ 907 (1236)
..|. +.... ..+. . ......++
T Consensus 272 -~~~~--------------------~~~~~-~~~~-~------------------------~~~~~~~~----------- 293 (552)
T TIGR03719 272 -LEWV--------------------RSSPK-ARQA-K------------------------SKARLARY----------- 293 (552)
T ss_pred -HHHH--------------------Hhhhh-hHHH-H------------------------HHHHHHHH-----------
Confidence 0000 00000 0000 0 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 908 IRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGL 987 (1236)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 987 (1236)
++..+
T Consensus 294 --------------------------------------------------------------------------~~~~~- 298 (552)
T TIGR03719 294 --------------------------------------------------------------------------EELLS- 298 (552)
T ss_pred --------------------------------------------------------------------------Hhhhh-
Confidence 00000
Q ss_pred HhcccccCCCccc--cCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC
Q 040099 988 IDQVSKIDSSEYT--GRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP 1065 (1236)
Q Consensus 988 ~~~~~~~~~~~~~--~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~ 1065 (1236)
..++..+..... .........-++++|++++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|
T Consensus 299 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~---~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p 374 (552)
T TIGR03719 299 -QEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGDK---LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP 374 (552)
T ss_pred -hcccccCCCceeecCCCCCCCCeEEEEeeEEEEECCe---eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC
Confidence 000000000000 00000011248999999999743 599999999999999999999999999999999999999
Q ss_pred CCcEEEECCeecccCChHHHhcceEEEcCCCC-CCh-hhHHHHHHHHhh----------hchHHHhhhhchhh-hhcCCC
Q 040099 1066 SSGHITLDGVEIQKLQVKWLRQQMGVVSQEPV-LFS-DTIRANIAEMAN----------ANGFISGLQEGYDT-LVGERG 1132 (1236)
Q Consensus 1066 ~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~-LF~-gTIreNL~~~a~----------~~~~i~~lp~Gldt-~vge~G 1132 (1236)
++|+|.+++ ++ +|+|+||++. ++. .|++||+..... ..+.+..+ |++. ......
T Consensus 375 ~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~ 441 (552)
T TIGR03719 375 DSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRF--NFKGSDQQKKV 441 (552)
T ss_pred CCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhC--CCChhHhcCch
Confidence 999999964 21 6999999973 554 599999853211 11222222 3432 234566
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeC-CEE
Q 040099 1133 VQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQ-GMI 1210 (1236)
Q Consensus 1133 ~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~-G~I 1210 (1236)
..||||||||++|||||+.+|++|||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. ||+|++|++ |++
T Consensus 442 ~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~~viivsHd~~~~~~~~d~i~~l~~~~~~ 519 (552)
T TIGR03719 442 GQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF--AGCAVVISHDRWFLDRIATHILAFEGDSHV 519 (552)
T ss_pred hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHhCCEEEEEECCCeE
Confidence 789999999999999999999999999999999999999999999986 3599999999999976 999999997 687
Q ss_pred E-EecChhHHhhc
Q 040099 1211 V-EKGSHESLIST 1222 (1236)
Q Consensus 1211 v-e~Gt~~eLl~~ 1222 (1236)
+ ..|+++++.+.
T Consensus 520 ~~~~g~~~~~~~~ 532 (552)
T TIGR03719 520 EWFEGNYSEYEED 532 (552)
T ss_pred EEeCCCHHHHHHH
Confidence 6 45888877653
No 94
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-65 Score=633.29 Aligned_cols=194 Identities=28% Similarity=0.474 Sum_probs=162.6
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 4899999999974 35899999999999999999999999999999999999999999999741 269
Q ss_pred EEEcCCC--CCCh-hhHHHHHHHH------hhhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 040099 1090 GVVSQEP--VLFS-DTIRANIAEM------ANANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAIVKEPKILLLD 1159 (1236)
Q Consensus 1090 ~~V~Qdp--~LF~-gTIreNL~~~------a~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARALlr~p~ILlLD 1159 (1236)
+|++|++ .++. .|+.+++... ..+.+++..+ |+. ..+......||||||||++||||++.+|++||||
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLD 455 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGF--GFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLD 455 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHc--CCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 9999985 3443 4788876421 1122333332 332 2344566789999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEE-EecChhHHhh
Q 040099 1160 EATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIV-EKGSHESLIS 1221 (1236)
Q Consensus 1160 EaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Iv-e~Gt~~eLl~ 1221 (1236)
|||++||+.+...+.+.|+++ ++|||+|||+++.+.. ||+|++|++|+++ ..|++++..+
T Consensus 456 EPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 456 EPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 999999999999999999986 4599999999999975 9999999999997 6799998843
No 95
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.7e-63 Score=659.51 Aligned_cols=205 Identities=24% Similarity=0.385 Sum_probs=171.4
Q ss_pred cEEEeEEEEECCCC----------CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC--CCcEEEECCeec
Q 040099 1010 EVQFLRVSFKYPTR----------PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP--SSGHITLDGVEI 1077 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~----------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~--~~G~I~idG~di 1077 (1236)
.+.|+||++.++.. ....+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 68999999998532 123699999999999999999999999999999999999773 689999999886
Q ss_pred ccCChHHHhcceEEEcCCCCCCh-hhHHHHHHHHhh---------------hchHHH--hhhhchhhhhcCCC-CCCChh
Q 040099 1078 QKLQVKWLRQQMGVVSQEPVLFS-DTIRANIAEMAN---------------ANGFIS--GLQEGYDTLVGERG-VQLSGG 1138 (1236)
Q Consensus 1078 ~~i~~~~lR~~i~~V~Qdp~LF~-gTIreNL~~~a~---------------~~~~i~--~lp~Gldt~vge~G-~~LSGG 1138 (1236)
+ ...+|+.+|||+|++.++. .|++|||.-.+. +.+.++ .|.+-.|+.+|..+ ..||||
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTE 1023 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHH
Confidence 4 3457788999999987775 599999952221 112222 23344577787554 679999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchh-h-hhcCEEEEEeC-CEEEEec
Q 040099 1139 QKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLST-I-KNAHLIAVVSQ-GMIVEKG 1214 (1236)
Q Consensus 1139 QrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~t-i-~~aD~I~Vl~~-G~Ive~G 1214 (1236)
||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +|+|+|+++|+++. + ..||++++|++ |++++.|
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G 1103 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSG 1103 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEEC
Confidence 9999999999999999999999999999999999999999875 47899999999984 4 66999999996 8999999
Q ss_pred Chh
Q 040099 1215 SHE 1217 (1236)
Q Consensus 1215 t~~ 1217 (1236)
++.
T Consensus 1104 ~~~ 1106 (1470)
T PLN03140 1104 PLG 1106 (1470)
T ss_pred Ccc
Confidence 864
No 96
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.7e-63 Score=621.54 Aligned_cols=194 Identities=25% Similarity=0.429 Sum_probs=161.1
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDGK---QLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECCe---EEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 48999999999743 5899999999999999999999999999999999999999999999 4332 59
Q ss_pred EEEcCCC-CCChh-hHHHHHHHHhh----------hchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEP-VLFSD-TIRANIAEMAN----------ANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp-~LF~g-TIreNL~~~a~----------~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+|++|++ .++.. |+.||+..... +.+++..+ |+. .........||||||||++|||||+.+|++|
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lL 462 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDF--LFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLL 462 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhc--CCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999986 46554 99999863211 11112111 222 1234455689999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEe-CCEEEEe-cChhHHhh
Q 040099 1157 LLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVS-QGMIVEK-GSHESLIS 1221 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~-~G~Ive~-Gt~~eLl~ 1221 (1236)
||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. ||+|++|+ +|+|.++ |++++.+.
T Consensus 463 lLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 463 ILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred EEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 999999999999999999999876 5699999999999965 99999998 8999874 78888754
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.5e-63 Score=616.08 Aligned_cols=193 Identities=32% Similarity=0.441 Sum_probs=158.1
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 58999999999643 2589999999999999999999999999999999999999999999875 3479
Q ss_pred EEEcCCCCCChhhHHHHHHH-Hh---------hhchHHHhhhhchhh-hhcCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 040099 1090 GVVSQEPVLFSDTIRANIAE-MA---------NANGFISGLQEGYDT-LVGERGVQLSGGQKQRVAIARAIVKEPKILLL 1158 (1236)
Q Consensus 1090 ~~V~Qdp~LF~gTIreNL~~-~a---------~~~~~i~~lp~Gldt-~vge~G~~LSGGQrQRlaLARALlr~p~ILlL 1158 (1236)
+|+||++. ...++.+|... .. .+..++..+ |+.. ........||||||||++||||++.+|++|||
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~--gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~p~lLLL 651 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSF--GVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLL 651 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHC--CCChHHhcCCccccCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999973 22345555321 11 111122221 3432 34556788999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEE-EecChhHHh
Q 040099 1159 DEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIV-EKGSHESLI 1220 (1236)
Q Consensus 1159 DEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Iv-e~Gt~~eLl 1220 (1236)
||||++||+.+...+.+.|.+. ++|+|+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 652 DEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 652 DEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 9999999999999999999875 3599999999999976 9999999999998 578887764
No 98
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-62 Score=564.20 Aligned_cols=441 Identities=27% Similarity=0.419 Sum_probs=342.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH-HHhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK-WIREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~-~~r~~ 462 (1236)
-++++|++++|+ ..++|+||||++.+||++|++|.||||||||+|.|+|.|+|++|+|.+||++..-.++. .....
T Consensus 8 ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 488999999997 35799999999999999999999999999999999999999999999999999876665 45667
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCCC------CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTHA------TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
|+.|+||..|++. ||.|||.+|++.. +..++.+.++ +.+.++ |.+........+||+||||.|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~-----~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR-----ELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH-----HHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 9999999999875 9999999997643 2344443333 233333 221113344457999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCc-ccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTH-SELLENP 612 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~-~~l~~~~ 612 (1236)
||+..+++|||||||||+|+....+.+++.+++++ +|.++|+||||++.+.. ||||.||.||+.+..++. .++-..
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~~- 236 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSED- 236 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCHH-
Confidence 99999999999999999999999999999999996 58999999999999865 999999999999875541 111000
Q ss_pred cchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHH
Q 040099 613 YGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLG 692 (1236)
Q Consensus 613 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1236)
+
T Consensus 237 -----~-------------------------------------------------------------------------- 237 (500)
T COG1129 237 -----E-------------------------------------------------------------------------- 237 (500)
T ss_pred -----H--------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 693 AIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKV 772 (1236)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 772 (1236)
++..+
T Consensus 238 --------------------lv~~M------------------------------------------------------- 242 (500)
T COG1129 238 --------------------LVRLM------------------------------------------------------- 242 (500)
T ss_pred --------------------HHHHh-------------------------------------------------------
Confidence 00000
Q ss_pred hcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 040099 773 VYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQM 852 (1236)
Q Consensus 773 l~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~ 852 (1236)
.|+
T Consensus 243 --------------vGr--------------------------------------------------------------- 245 (500)
T COG1129 243 --------------VGR--------------------------------------------------------------- 245 (500)
T ss_pred --------------hCc---------------------------------------------------------------
Confidence 000
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 853 KSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVT 932 (1236)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1236)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEE
Q 040099 933 FYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQ 1012 (1236)
Q Consensus 933 ~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~ 1012 (1236)
++-+..+. . ... ....--++
T Consensus 246 -----------------------------------------------------~~~~~~~~-~-~~~-----~~~~~~l~ 265 (500)
T COG1129 246 -----------------------------------------------------ELEDLFPE-P-PEE-----GIGEPVLE 265 (500)
T ss_pred -----------------------------------------------------chhhhccc-c-ccc-----CCCCcEEE
Confidence 00000000 0 000 00011355
Q ss_pred EeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC-hHHHhcceEE
Q 040099 1013 FLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ-VKWLRQQMGV 1091 (1236)
Q Consensus 1013 f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~-~~~lR~~i~~ 1091 (1236)
++|++.. ..++|+||++++||.+||.|-=|||+|-++.+|+|..++.+|+|++||.++.--+ .+..+..|+|
T Consensus 266 v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~ 338 (500)
T COG1129 266 VRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAY 338 (500)
T ss_pred EecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEe
Confidence 6666542 1489999999999999999999999999999999999899999999999887554 5688999999
Q ss_pred EcCCCC----CChhhHHHHHH-----------------HHhhhchHHHhhhh---chhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1092 VSQEPV----LFSDTIRANIA-----------------EMANANGFISGLQE---GYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1092 V~Qdp~----LF~gTIreNL~-----------------~~a~~~~~i~~lp~---Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
||-|.- +...+|++|+. +...+.+++..|.- +.+ ..-.+||||.+|+++|||
T Consensus 339 v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~----~~v~~LSGGNQQKVvlar 414 (500)
T COG1129 339 VPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPE----QPIGTLSGGNQQKVVLAR 414 (500)
T ss_pred CCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCcc----chhhcCCchhhhhHHHHH
Confidence 999863 44669999984 11122223333321 122 334579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChh
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHE 1217 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~ 1217 (1236)
+|..+|+||||||||.++|..+...|.+.|+++. +|.++|+||-.+..+. .||||+||.+|+|+..=+.+
T Consensus 415 wL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 415 WLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred HHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 9999999999999999999999999999999876 5799999999999987 59999999999998754433
No 99
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.2e-62 Score=603.97 Aligned_cols=431 Identities=22% Similarity=0.334 Sum_probs=316.0
Q ss_pred EeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEE-----------ECCeecCCCCH
Q 040099 388 KDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVL-----------IDGVNLKEFQL 456 (1236)
Q Consensus 388 ~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~-----------~~g~~~~~~~~ 456 (1236)
++++++|+. +..+|++++ ++++||++||+||||||||||+++|+|+++|++|+|. ++|.++.++..
T Consensus 77 ~~~~~~yg~--~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~ 153 (590)
T PRK13409 77 EEPVHRYGV--NGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFK 153 (590)
T ss_pred cCceEEecC--CceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHH
Confidence 348899963 346999999 9999999999999999999999999999999999997 89988865432
Q ss_pred H--HHhcceE----EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 457 K--WIREKIG----LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 457 ~--~~r~~i~----~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
+ ..+.+++ |++|.|.+|.+|++||+.... ..+++.++++..++ +........+|||||||
T Consensus 154 ~~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~~---~~~~~~~~l~~l~l-----------~~~~~~~~~~LSgGe~q 219 (590)
T PRK13409 154 KLYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKVD---ERGKLDEVVERLGL-----------ENILDRDISELSGGELQ 219 (590)
T ss_pred HHhccCcceeecccchhhhhhhhcchHHHHHHhhh---HHHHHHHHHHHcCC-----------chhhcCChhhCCHHHHH
Confidence 1 1122344 555566778889999997421 22344555544443 33344555689999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
|++|||||+++|++||||||||+||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|. |
T Consensus 220 rv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----g------ 289 (590)
T PRK13409 220 RVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----G------ 289 (590)
T ss_pred HHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc----c------
Confidence 999999999999999999999999999999999999998668899999999999876 99999997631 1
Q ss_pred ccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHH
Q 040099 610 ENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPAL 689 (1236)
Q Consensus 610 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1236)
.|.... .... .
T Consensus 290 -----~~g~~~-~~~~-------------------------------------------------~-------------- 300 (590)
T PRK13409 290 -----AYGVVS-KPKG-------------------------------------------------V-------------- 300 (590)
T ss_pred -----ccceec-chhH-------------------------------------------------H--------------
Confidence 110000 0000 0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 690 LLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCF 769 (1236)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 769 (1236)
... ...|. ..
T Consensus 301 -------------------------------~~~----i~~~~----------------~~------------------- 310 (590)
T PRK13409 301 -------------------------------RVG----INEYL----------------KG------------------- 310 (590)
T ss_pred -------------------------------HHh----HHHHH----------------Hh-------------------
Confidence 000 00000 00
Q ss_pred HHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 040099 770 EKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGH 849 (1236)
Q Consensus 770 ~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~ 849 (1236)
+ .
T Consensus 311 ---------~-~-------------------------------------------------------------------- 312 (590)
T PRK13409 311 ---------Y-L-------------------------------------------------------------------- 312 (590)
T ss_pred ---------c-c--------------------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 850 IQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAY 929 (1236)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1236)
. . | ++ + +. ..
T Consensus 313 ------~--~---------------e---~~---~-----------~~---~~--------------------------- 322 (590)
T PRK13409 313 ------P--E---------------E---NM---R-----------IR---PE--------------------------- 322 (590)
T ss_pred ------h--h---------------h---hh---h-----------cc---cc---------------------------
Confidence 0 0 0 00 0 00 00
Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccc
Q 040099 930 AVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMG 1009 (1236)
Q Consensus 930 ~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g 1009 (1236)
.++ + ...+. .... ...-
T Consensus 323 --------------~~~--------------------------------------~---~~~~~--~~~~------~~~~ 339 (590)
T PRK13409 323 --------------PIE--------------------------------------F---EERPP--RDES------ERET 339 (590)
T ss_pred --------------Ccc--------------------------------------e---ecCCC--cccc------CCce
Confidence 000 0 00000 0000 0011
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-++++|++++|++. .|+++||+|++||++||+||||||||||+++|.|+.+|++|+|.++ .++
T Consensus 340 ~l~~~~ls~~~~~~----~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGDF----SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKI 402 (590)
T ss_pred EEEEcceEEEECCE----EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeE
Confidence 48999999999642 4999999999999999999999999999999999999999999986 159
Q ss_pred EEEcCCCCC-ChhhHHHHHHHHhh-------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecC
Q 040099 1090 GVVSQEPVL-FSDTIRANIAEMAN-------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEA 1161 (1236)
Q Consensus 1090 ~~V~Qdp~L-F~gTIreNL~~~a~-------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEa 1161 (1236)
+|+||++.+ ++.|++||+..... ..+.+..+ |++.........||||||||++|||||+++|+|||||||
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l--~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~llLLDEP 480 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPL--QLERLLDKNVKDLSGGELQRVAIAACLSRDADLYLLDEP 480 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHC--CCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 999999865 46799999863211 11222222 455455667788999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecC
Q 040099 1162 TSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGS 1215 (1236)
Q Consensus 1162 TSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt 1215 (1236)
|++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 481 t~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 481 SAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 999999999999999998753 7899999999999865 999999964 8877765
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=4.2e-59 Score=583.83 Aligned_cols=513 Identities=16% Similarity=0.141 Sum_probs=419.5
Q ss_pred hHHHhhhcCCchH-----HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchh-HHhhhHHHHHHHHHHHHHHHHHHHHH
Q 040099 675 LSRLAYLNSPEVP-----ALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKE-ELMRHSKHWALMFVALGAASLLTSPL 748 (1236)
Q Consensus 675 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 748 (1236)
+++++.+..|+++ .+++.+++.++...+....+++.+.+++....... ........|.++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667777765 46666666777777788888888888887643321 11112233444455556666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 749 SMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFK 828 (1236)
Q Consensus 749 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~ 828 (1236)
..++......++.+++|.+.+++....++++||. ++|++.+|+++|++.+.+.+...+..++..++.+++.++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888889999999999999999999999983 6899999999999999999999999999999998888887775
Q ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHH
Q 040099 829 -ACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAG 907 (1236)
Q Consensus 829 -~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~ 907 (1236)
.+|.+++++++.+|+..++..++.++..+...+.++..++....+.|.++|+++|++|+.++.+.+++.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHh-h----cCCCHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHH
Q 040099 908 IRQGLMSGIGFGLSFFFFFM--AYAVTFYVGAKLVD-H----KQATFTEVFRV-FFA---LSMTAIGISQTSSLASDASK 976 (1236)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv~-~----~~~~~~~l~~~-~~~---~~~~~~~~~~~~~~~~~~~~ 976 (1236)
.+...+......+..++... ..+..++.|...+. . |.+|.|.+++. ..+ ......++..+.....++++
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888877777776542 33333344443332 2 68898887663 332 45567889999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCC------ccc--c--------------CccCCccccEEEeEEEEECCCCCCcccccceeE
Q 040099 977 AKSSAASVFGLIDQVSKIDSS------EYT--G--------------RTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCL 1034 (1236)
Q Consensus 977 ~~~a~~ri~~~~~~~~~~~~~------~~~--~--------------~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~ 1034 (1236)
+..+++|++++++.+++.... ... + ...+...+.|+++||+|+||+. .++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--CeeeecceE
Confidence 999999999999865432100 000 0 0011133579999999999743 359999999
Q ss_pred EecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHHHHH------
Q 040099 1035 TIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRANIA------ 1108 (1236)
Q Consensus 1035 ~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~------ 1108 (1236)
+|++||++||+||||||||||+++|.|+|+|++|+|.+|+ |+++++|||+|.+|++|++|||.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 67899999999999999999984
Q ss_pred ----------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHH
Q 040099 1109 ----------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERV 1172 (1236)
Q Consensus 1109 ----------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~ 1172 (1236)
+.+++++++.. |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 22344455555 789999876 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeC
Q 040099 1173 VQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQ 1207 (1236)
Q Consensus 1173 I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~ 1207 (1236)
+.+.+++. ++|+|+||||+++++.||+|++|+.
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 8999999999999999999999973
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.8e-60 Score=566.39 Aligned_cols=478 Identities=28% Similarity=0.393 Sum_probs=333.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|.++|++++|+ ++++|+|+||++.+|+++||||+||||||||+++|+|...|++|+|...+. -++
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 488999999995 357999999999999999999999999999999999999999999998752 269
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCCCC--HHHHHHHHH------------------H-------hccHHHHHhCCCCccc
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTHAT--KEEIQAAAE------------------A-------ANASHFIKNLPQGLDT 515 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~--~~~~~~~~~------------------~-------~~~~~~i~~l~~g~~t 515 (1236)
+|++|++.+.+. ||.|.+..+..... ..+++++.. . +.+...+..| |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999865 99999988754211 011111110 0 1122223333 3333
Q ss_pred cccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEE
Q 040099 516 NVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVI 594 (1236)
Q Consensus 516 ~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl 594 (1236)
. .....+||||||.|++|||||+.+|++|||||||++||.++..++.+.|.+.. | |+|+|||+..++.. |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~-g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYP-G-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCC-C-cEEEEeCCHHHHHHHhhheEEe
Confidence 3 44556899999999999999999999999999999999999999999998763 5 99999999999987 9999999
Q ss_pred ECCEEE-EEeCcccccccccchhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcc
Q 040099 595 QQGKIV-EKGTHSELLENPYGAYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDV 673 (1236)
Q Consensus 595 ~~G~i~-~~g~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1236)
++|++. ..|++ ..+++........+....
T Consensus 224 d~g~l~~y~Gny-----------~~~~~~r~~~~~~~~~~~--------------------------------------- 253 (530)
T COG0488 224 DRGKLTPYKGNY-----------SSYLEQKAERLRQEAAAY--------------------------------------- 253 (530)
T ss_pred cCCceeEecCCH-----------HHHHHHHHHHHHHHHHHH---------------------------------------
Confidence 999874 34444 333322111000000000
Q ss_pred hhHHHhhhcCCchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 674 SLSRLAYLNSPEVPALLLGAIASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCF 753 (1236)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 753 (1236)
..
T Consensus 254 ------------------------------------------------~~------------------------------ 255 (530)
T COG0488 254 ------------------------------------------------EK------------------------------ 255 (530)
T ss_pred ------------------------------------------------HH------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 040099 754 AVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQL 833 (1236)
Q Consensus 754 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l 833 (1236)
+.+..++ .
T Consensus 256 -----------~~~~~~~-----------------------------~-------------------------------- 263 (530)
T COG0488 256 -----------QQKELAK-----------------------------E-------------------------------- 263 (530)
T ss_pred -----------HHHHHHH-----------------------------H--------------------------------
Confidence 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040099 834 ALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLM 913 (1236)
Q Consensus 834 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1236)
..+.+++...-....++
T Consensus 264 --------------------------------------------------------~~~i~r~~~~~~~~k~a------- 280 (530)
T COG0488 264 --------------------------------------------------------QEWIRRGKAAASKAKKA------- 280 (530)
T ss_pred --------------------------------------------------------HHHHHHHHhccchHHHH-------
Confidence 00000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 040099 914 SGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSK 993 (1236)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 993 (1236)
......++++.+......+
T Consensus 281 -------------------------------------------------------------~sr~k~l~k~~~~~~~~~~ 299 (530)
T COG0488 281 -------------------------------------------------------------KSRIKRLEKLEARLAEERP 299 (530)
T ss_pred -------------------------------------------------------------HHHHHHHHHHHhhhhhccc
Confidence 0000001111100000000
Q ss_pred cCCCccc--cCccC---CccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCc
Q 040099 994 IDSSEYT--GRTLE---NVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSG 1068 (1236)
Q Consensus 994 ~~~~~~~--~~~~~---~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G 1068 (1236)
....... ..+++ ...--++++|++++|+.. .++++++||.|.+|++||||||||+|||||+++|.|-..|.+|
T Consensus 300 ~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G 377 (530)
T COG0488 300 VEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSG 377 (530)
T ss_pred ccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCc
Confidence 0000000 00011 112358999999999753 4689999999999999999999999999999999999999999
Q ss_pred EEEECCeecccCChHHHhcceEEEcCCC-CCC-hhhHHHHHHHHh------hhchHHHhhhhchh-hhhcCCCCCCChhH
Q 040099 1069 HITLDGVEIQKLQVKWLRQQMGVVSQEP-VLF-SDTIRANIAEMA------NANGFISGLQEGYD-TLVGERGVQLSGGQ 1139 (1236)
Q Consensus 1069 ~I~idG~di~~i~~~~lR~~i~~V~Qdp-~LF-~gTIreNL~~~a------~~~~~i~~lp~Gld-t~vge~G~~LSGGQ 1139 (1236)
+|.++-. -++||.+|+. .++ +.|+-|++.+.. .+..+..++ |+. ..+......|||||
T Consensus 378 ~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f--~F~~~~~~~~v~~LSGGE 444 (530)
T COG0488 378 TVKVGET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRF--GFTGEDQEKPVGVLSGGE 444 (530)
T ss_pred eEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHc--CCChHHHhCchhhcCHhH
Confidence 9998731 2589999998 444 348999886443 112222221 111 11234456799999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEe-cChh
Q 040099 1140 KQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEK-GSHE 1217 (1236)
Q Consensus 1140 rQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~-Gt~~ 1217 (1236)
|-|+.||+.++.+|.+|||||||++||.+|...+.++|.++ ..|||+|||+.+.+.. |++|+++++ ++.++ |+++
T Consensus 445 k~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~ 521 (530)
T COG0488 445 KARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYE 521 (530)
T ss_pred HHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHH
Confidence 99999999999999999999999999999999999999986 6799999999999987 999999999 88887 8999
Q ss_pred HHhhc
Q 040099 1218 SLIST 1222 (1236)
Q Consensus 1218 eLl~~ 1222 (1236)
+..+.
T Consensus 522 ~y~~~ 526 (530)
T COG0488 522 DYLEQ 526 (530)
T ss_pred HHHHh
Confidence 98775
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3e-59 Score=527.45 Aligned_cols=451 Identities=24% Similarity=0.432 Sum_probs=351.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC-HHHHhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ-LKWIREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~ 462 (1236)
.++++++++.|| +..+++||||+|++||+.||.|+||+|||||+++|.|+|+|++|+|++||++++--+ .+..|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999997 357999999999999999999999999999999999999999999999999998554 4668889
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCCC-----CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTHA-----TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
||+|.|++.|++. ||.|||.+|.+.. +..+..+ .+.+..+++ |++-...+....||-||||||.|-+
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~-----~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlK 153 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARA-----RIKELSERY--GLPVDPDAKVADLSVGEQQRVEILK 153 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHH-----HHHHHHHHh--CCCCCccceeecCCcchhHHHHHHH
Confidence 9999999999976 9999999998642 2222211 122333333 5655566667789999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYG 614 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~ 614 (1236)
|||++|++||||||||-|-|.....+++.++++. .|+|+|+|||++..+.. |||+-||.+|+++..-+ ..-+..
T Consensus 154 aLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~--~~~~~t-- 229 (501)
T COG3845 154 ALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD--PVAETT-- 229 (501)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec--CCCCCC--
Confidence 9999999999999999999999999999999986 58999999999999976 99999999999864321 100000
Q ss_pred hhhhhHHhhhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCcCCCCccccccCCCCcchhHHHhhhcCCchHHHHHHHH
Q 040099 615 AYNRLIRLQETCKESEKSAVNNSDSDNQPFASPKITTPKQSETESDFPASEKAKMPPDVSLSRLAYLNSPEVPALLLGAI 694 (1236)
Q Consensus 615 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1236)
. + .+.++
T Consensus 230 -----------------------------------------------~----~------ela~l---------------- 236 (501)
T COG3845 230 -----------------------------------------------E----E------ELAEL---------------- 236 (501)
T ss_pred -----------------------------------------------H----H------HHHHH----------------
Confidence 0 0 00000
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCchhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 040099 695 ASMTNGIIIPIFGVMLAAMVNTLNEPKEELMRHSKHWALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVY 774 (1236)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 774 (1236)
+ .
T Consensus 237 -------------------M---v-------------------------------------------------------- 238 (501)
T COG3845 237 -------------------M---V-------------------------------------------------------- 238 (501)
T ss_pred -------------------h---c--------------------------------------------------------
Confidence 0 0
Q ss_pred CCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 775 MEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLSLLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKS 854 (1236)
Q Consensus 775 ~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 854 (1236)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 855 MKGFSANAENMYEEASQVASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFY 934 (1236)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1236)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEe
Q 040099 935 VGAKLVDHKQATFTEVFRVFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFL 1014 (1236)
Q Consensus 935 ~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~ 1014 (1236)
| .++. ...+ .... .+-.--++++
T Consensus 239 -G------~~v~-------------------------------------------~~~~-~~~~------~pg~~vL~V~ 261 (501)
T COG3845 239 -G------REVV-------------------------------------------LRVV-KPPS------TPGEVVLEVE 261 (501)
T ss_pred -C------Cccc-------------------------------------------cccc-cCCC------CCCCeEEEEe
Confidence 0 0000 0000 0000 0011247889
Q ss_pred EEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeec-ccCChHHHh-cceEEE
Q 040099 1015 RVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEI-QKLQVKWLR-QQMGVV 1092 (1236)
Q Consensus 1015 ~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di-~~i~~~~lR-~~i~~V 1092 (1236)
|++..-+ + ..+.+++|||+|++||.+||.|-.|.|-|.|+.+|.|+.+|.+|+|.++|.|+ ...+...+| ..+++|
T Consensus 262 ~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~V 339 (501)
T COG3845 262 DLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYV 339 (501)
T ss_pred eeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccC
Confidence 9988643 2 24679999999999999999999999999999999999999999999999997 566766655 469999
Q ss_pred cCCCC----CChhhHHHHHHH---------------HhhhchHHHhhhhchhhhh---cCCCCCCChhHHHHHHHHHHHc
Q 040099 1093 SQEPV----LFSDTIRANIAE---------------MANANGFISGLQEGYDTLV---GERGVQLSGGQKQRVAIARAIV 1150 (1236)
Q Consensus 1093 ~Qdp~----LF~gTIreNL~~---------------~a~~~~~i~~lp~Gldt~v---ge~G~~LSGGQrQRlaLARALl 1150 (1236)
|.|.+ ..+-|+.||+.- .-.+..+...+-+.||-.- .....+||||+.||+-+||-|.
T Consensus 340 PedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~~a~~LSGGNqQK~IlaREl~ 419 (501)
T COG3845 340 PEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDAPARSLSGGNQQKLILARELA 419 (501)
T ss_pred ChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCcchhhcCCcceehhhhhhhhc
Confidence 99984 567799999840 0111122223333333221 1233589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 040099 1151 KEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHES 1218 (1236)
Q Consensus 1151 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~e 1218 (1236)
++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-.|+.+.. ||||.||.+|+|+....+++
T Consensus 420 ~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 420 RRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred cCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 9999999999999999999999999998765 57899999999999966 99999999999998887765
No 103
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-52 Score=423.42 Aligned_cols=216 Identities=34% Similarity=0.580 Sum_probs=189.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecC-CCCHHHHhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLK-EFQLKWIREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~ 462 (1236)
-|+++||+++|. +..||+|||++|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 389999999996 357999999999999999999999999999999999999999999999998774 3378889999
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCC---CCCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKT---HATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
+|+|+|+..||+- |+.||+.++.- ..+.++ ..+.++.+++.+-.+..| .+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 9999999999975 99999998732 223333 233444555555555554 5999999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENP 612 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~ 612 (1236)
||||+.+|+++++|||||||||+....+.+.++++.+ |.|.|+|||.+.+++. ||||+.||+|+|+++|+++++..+|
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999999999999864 7899999999999987 9999999999999999999999876
Q ss_pred c
Q 040099 613 Y 613 (1236)
Q Consensus 613 ~ 613 (1236)
.
T Consensus 228 ~ 228 (240)
T COG1126 228 K 228 (240)
T ss_pred C
Confidence 4
No 104
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.1e-51 Score=455.27 Aligned_cols=223 Identities=28% Similarity=0.513 Sum_probs=209.4
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcc
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQ 1088 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~ 1088 (1236)
|.|+|+||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|++||+|+..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 579999999999743 2469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
|+||||+|.+|++|+++|++ +.+++.+++.++|++|++.++++|.+||||||||+|||||++++|+
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999994 4456677889999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhcc
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEPH 1234 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~q 1234 (1236)
||||||||++||+.+++.+++.|++.+.++|+|+||||++++..||||+||++|+|+|.|+|++|+++ .+.|++++...
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 237 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPS 237 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhc
Confidence 99999999999999999999999988888999999999999999999999999999999999999996 78899988653
No 105
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-50 Score=429.94 Aligned_cols=218 Identities=38% Similarity=0.591 Sum_probs=190.6
Q ss_pred EEEEeEEEECCCC--CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH---HHH
Q 040099 385 IELKDVNFSYPAR--PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL---KWI 459 (1236)
Q Consensus 385 i~~~~v~f~y~~~--~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~ 459 (1236)
|++++|++.|+.. +...+|+||||+|++||+.||||+||||||||++++.++..|++|+|.+||+|+..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999752 12569999999999999999999999999999999999999999999999999887765 456
Q ss_pred hcceEEEccCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 460 REKIGLVSQEPVLLS-SSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
|++|||+||++.|++ .||++|++|...- .++ +++.+.++.+++.|+..+ .+.+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~-----------yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADR-----------YPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhcc-----------CchhcCcchhhHH
Confidence 789999999999997 6999999997532 223 334455555555555444 4569999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
+|||||+.+|+||+.|||||||||+|.+.|.+.|+++.+ |-|+++|||.++.++. |||+.||++|+++|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998853 7899999999999987 9999999999999999999999
Q ss_pred cccc
Q 040099 610 ENPY 613 (1236)
Q Consensus 610 ~~~~ 613 (1236)
.+|.
T Consensus 231 ~~Pk 234 (339)
T COG1135 231 ANPK 234 (339)
T ss_pred cCcc
Confidence 8864
No 106
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.5e-49 Score=441.59 Aligned_cols=237 Identities=27% Similarity=0.464 Sum_probs=220.1
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
|.|+++|++|+|+.. +.++|+|+||+|++||+++|+||||||||||+++|.|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 468999999999742 3569999999999999999999999999999999999998 79999999999999999999999
Q ss_pred eEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 463 IGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 463 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
|+||||++.+|++|+++|+....+ .++++++++++.+++.+++.++|++++|.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999964322 4678999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHHh
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIRL 622 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~~ 622 (1236)
+||||||||++||+.+...+++.|++..+++|+|+||||++++..||||++|++|++++.|++++++++ .+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhh
Confidence 999999999999999999999999988778999999999999989999999999999999999999986 5777777654
Q ss_pred h
Q 040099 623 Q 623 (1236)
Q Consensus 623 ~ 623 (1236)
.
T Consensus 237 ~ 237 (275)
T cd03289 237 S 237 (275)
T ss_pred c
Confidence 3
No 107
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-50 Score=412.87 Aligned_cols=218 Identities=34% Similarity=0.569 Sum_probs=194.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+|+|||+.|. ++.+++|+||+|++||+++++|||||||||++|+|.|+++|++|+|++||+++++++..++|++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999996 457999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCc-hhHHHHHhcCCC--CCCH----HHHHHHHHHhccH--HHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKT--HATK----EEIQAAAEAANAS--HFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~--~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
||-|..-||+ .||.|||++-.. ..++ +++.+.++..+++ +|..+.|+ .|||||+|||.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHH
Confidence 9999999996 499999997421 1233 4456667777775 46666664 8999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhH-hhcCeEEEEECCEEEEEeCcccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLI-RNANIIAVIQQGKIVEKGTHSELLENP 612 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~ad~i~vl~~G~i~~~g~~~~l~~~~ 612 (1236)
|||+.+|+|+++|||++||||.++..+++.+.++.+ ++|+|+|||+++.. +.||||.+|++|+|+..+++++++.+|
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999988864 79999999999986 559999999999999999999999887
Q ss_pred cchh
Q 040099 613 YGAY 616 (1236)
Q Consensus 613 ~~~y 616 (1236)
...|
T Consensus 228 an~F 231 (309)
T COG1125 228 ANDF 231 (309)
T ss_pred cHHH
Confidence 5433
No 108
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-49 Score=399.39 Aligned_cols=221 Identities=35% Similarity=0.558 Sum_probs=198.9
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCC-----cEEEECCeecCC--CC
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQA-----GEVLIDGVNLKE--FQ 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~~~g~~~~~--~~ 455 (1236)
..++++|+++.|. ++.+|+|||++|++++++|++||||||||||++++.|+.+..+ |+|.++|+|+.+ ++
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 3589999999996 4579999999999999999999999999999999999999875 999999999975 57
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCCC------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
...+|++||+|+|.|.-|+.||+||++||..- .-++-++++++.|.+++-+.. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 89999999999999999999999999998421 113557788899988877643 34567788999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||+||||||.-+|+||+||||||||||.+...|.+.+.+++++-|+|+|||.+..... +|+..++.+|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999988999999999998755 999999999999999999999
Q ss_pred ccccc
Q 040099 609 LENPY 613 (1236)
Q Consensus 609 ~~~~~ 613 (1236)
..+|.
T Consensus 236 F~~P~ 240 (253)
T COG1117 236 FTNPK 240 (253)
T ss_pred hcCcc
Confidence 88753
No 109
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-49 Score=398.50 Aligned_cols=211 Identities=34% Similarity=0.539 Sum_probs=184.1
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecc-cCChHHHhcc
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQ-KLQVKWLRQQ 1088 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~-~i~~~~lR~~ 1088 (1236)
-|+++||+.+|.. ..||+|||++|++||.++|+||||||||||+++|.++-+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 3899999999973 46999999999999999999999999999999999999999999999998774 3378999999
Q ss_pred eEEEcCCCCCChh-hHHHHHH---------HHhhh----chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEPVLFSD-TIRANIA---------EMANA----NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp~LF~g-TIreNL~---------~~a~~----~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
+|+|+|...||+- |+.||+. ..+.+ .++.+.. |+......-..+||||||||+||||||..+|+
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHHcCCCC
Confidence 9999999999975 9999984 11111 1222211 44444456678999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCc
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNG 1225 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g 1225 (1236)
|+++|||||||||+.-..|.+.++++. .|.|.|+|||.+...++ ||||+.||+|+|+|+|+|+++..++..
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 999999999999999999999999886 46799999999999987 999999999999999999999987543
No 110
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=399.28 Aligned_cols=473 Identities=20% Similarity=0.234 Sum_probs=366.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchHHHHHHhhHHHHHHHHHHHHHHHH
Q 040099 108 KKFVYLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEVVGRISGDTLLIQDAIGEKVGKFI 187 (1236)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~ 187 (1236)
..+.++..+..+.+.+........|+++.+++|.++.++++.-|+.-+++. +++.++.++++|+..|. +-...++.+.
T Consensus 52 ~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~-~~~rlla~L~~Dvr~IS-f~~s~lp~~~ 129 (546)
T COG4615 52 PEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERL-GSARLLAGLTSDVRNIS-FAFSRLPELV 129 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHh-cccchhhhhccccccee-ehHhhhHHHH
Confidence 344455555556667777888889999999999999999999999999998 99999999999999999 4445568889
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHH--
Q 040099 188 QFGASFIGGFLIAFFKGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAATVVAQTIGSIRTVASFTGEQQ-- 265 (1236)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~-- 265 (1236)
.+.+..+++.+++.|+|+++.+++++.+.+.++...+...+..+.....++..+++....+-.+.|-+..+....-.+
T Consensus 130 qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~ 209 (546)
T COG4615 130 QAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYV 209 (546)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHH
Confidence 999999999999999999999999998888888888888899999999999999999999999999999998653222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 266 ASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVMSVIFGVLIGSMSLGQASPCL 345 (1236)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~~~~~~~~~~~~~l~~~~~~~ 345 (1236)
..++|....++..+...+..........+.+++.+....+++|+.... +--+.....++...++++-.|+.+....+
T Consensus 210 h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vgil 286 (546)
T COG4615 210 HNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVGIL 286 (546)
T ss_pred HhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHhhh
Confidence 223333333333332222222222233344455555555555544322 22222333344455556678999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCc
Q 040099 346 SAFAAGQAAAFKFFEAINRKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSG 425 (1236)
Q Consensus 346 ~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsG 425 (1236)
+.+.+|.+|++||.++-..|+. .+.. .+...++. ..|+++||.|+|+.. ..-+..||++|++||+|-|+|.||||
T Consensus 287 P~l~~AqvA~~kiakle~~~~~-a~~~-~~q~~p~~-~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsG 361 (546)
T COG4615 287 PTLLTAQVAFNKIAKLELAPYK-ADFP-RPQAFPDW-KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSG 361 (546)
T ss_pred hHHHHHHHHHHHHHHhhcCCcc-ccCC-CCCcCCcc-cceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCc
Confidence 9999999999999987543332 2211 11222333 469999999999742 24578899999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCC-CCHHHHHHHHHHhccHH
Q 040099 426 KSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH-ATKEEIQAAAEAANASH 504 (1236)
Q Consensus 426 KSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~ 504 (1236)
|||++++|.|+|.|++|+|++||+++..-++++.|+-++-|+-|.|||+.++ |.+. ++++.+..-++...+..
T Consensus 362 KST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~ 435 (546)
T COG4615 362 KSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAH 435 (546)
T ss_pred HHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999998765 4333 67776666555544433
Q ss_pred HHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCc
Q 040099 505 FIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRL 582 (1236)
Q Consensus 505 ~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~ 582 (1236)
... +-+|-=+ ...||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+-.+. .|||++.|||+-
T Consensus 436 kts-l~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd 509 (546)
T COG4615 436 KTS-LNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDD 509 (546)
T ss_pred hhc-ccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCc
Confidence 221 2111111 24699999999999999999999999999999999999999888765443 489999999999
Q ss_pred hhHhhcCeEEEEECCEEEEE
Q 040099 583 SLIRNANIIAVIQQGKIVEK 602 (1236)
Q Consensus 583 ~~~~~ad~i~vl~~G~i~~~ 602 (1236)
....+|||++.|++|+++|.
T Consensus 510 ~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 510 HYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhhhHHHHHHHhcCceeec
Confidence 99999999999999999875
No 111
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.7e-47 Score=430.71 Aligned_cols=193 Identities=28% Similarity=0.400 Sum_probs=150.5
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-|.|.||+|+|++.+ .++++++|-|.++++||+|||+|+|||||++++.+...|+.|.|.-.-.. ++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cc
Confidence 589999999998765 68999999999999999999999999999999999999999998765321 22
Q ss_pred EEEcC---CCCCChhhHHHHHHHHhhh---chHHHhhhh--chhhhh-cCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 040099 1090 GVVSQ---EPVLFSDTIRANIAEMANA---NGFISGLQE--GYDTLV-GERGVQLSGGQKQRVAIARAIVKEPKILLLDE 1160 (1236)
Q Consensus 1090 ~~V~Q---dp~LF~gTIreNL~~~a~~---~~~i~~lp~--Gldt~v-ge~G~~LSGGQrQRlaLARALlr~p~ILlLDE 1160 (1236)
++..| |...++-|.-|++.+...- .+.+.+.-. |++... .-.-.+||+|||.|+++||.+++.|.||||||
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlLDE 535 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLLDE 535 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEecC
Confidence 33333 3345667777777533221 122222111 221110 01235899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEe-cChh
Q 040099 1161 ATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEK-GSHE 1217 (1236)
Q Consensus 1161 aTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~-Gt~~ 1217 (1236)
||++||.+|-..+.++|.+. ..+||+|+|+...|.+ +++|.+.++|.+... |...
T Consensus 536 PtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~ 592 (614)
T KOG0927|consen 536 PTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIE 592 (614)
T ss_pred CCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccHH
Confidence 99999999999999999876 6699999999999976 999999999988654 4443
No 112
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-48 Score=411.42 Aligned_cols=211 Identities=35% Similarity=0.563 Sum_probs=184.0
Q ss_pred EEEeEEEEECCCC--CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC---hHHH
Q 040099 1011 VQFLRVSFKYPTR--PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ---VKWL 1085 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~--~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~---~~~l 1085 (1236)
|++++|++.|+.. +...+|+||||+|++||..||+|+||+|||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999862 2246899999999999999999999999999999999999999999999999988775 5667
Q ss_pred hcceEEEcCCCCCCh-hhHHHHHH---HHhhh---------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1086 RQQMGVVSQEPVLFS-DTIRANIA---EMANA---------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~-gTIreNL~---~~a~~---------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
|++||+|+|++.|++ .|+.+|++ +.++. .++++- -|+.-.-+.-..+||||||||++|||||..+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLel--VgL~dk~~~yP~qLSGGQKQRVaIARALa~~ 159 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLEL--VGLSDKADRYPAQLSGGQKQRVAIARALANN 159 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHH--cCChhhhccCchhcCcchhhHHHHHHHHhcC
Confidence 889999999999997 79999996 22221 111110 1455555567789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
|+||++|||||||||+|-+.|.+.|++..+ |-|+++|||-++.+++ |||+.||++|+|+|+|+-.++..++
T Consensus 160 P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~P 233 (339)
T COG1135 160 PKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANP 233 (339)
T ss_pred CCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCc
Confidence 999999999999999999999999988643 6799999999999987 9999999999999999999999875
No 113
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-46 Score=431.80 Aligned_cols=224 Identities=29% Similarity=0.484 Sum_probs=197.0
Q ss_pred CCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--
Q 040099 381 IRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE-- 453 (1236)
Q Consensus 381 ~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~-- 453 (1236)
..+.|+++|++++|++ ..+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 77 ~~~~i~~~nls~~y~~-~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMN-RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecC-CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 3467999999999964 23579999999999999999999999999999999999997 579999999999973
Q ss_pred CCHHHHhcceEEEccCCCCCchhHHHHHhcCCC--CCCHHH-----HHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 454 FQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HATKEE-----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 454 ~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~~-----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
.+...+|+.++||||+|++|++|++|||.|+.. ..++++ +.++++.+++ ++++++.++++|.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccCCH
Confidence 455678999999999999999999999998742 123333 3444555543 44567889999999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCc
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~ 605 (1236)
|||||++||||++++|+|||||||||+||+++...+.+.|+++.+++|+|+|||+++++.. ||||+||++|+|++.|++
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998888999999999999987 999999999999999999
Q ss_pred ccccccc
Q 040099 606 SELLENP 612 (1236)
Q Consensus 606 ~~l~~~~ 612 (1236)
+++...+
T Consensus 309 ~~l~~~~ 315 (329)
T PRK14257 309 KTIFIHP 315 (329)
T ss_pred HHHhcCC
Confidence 9998764
No 114
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-46 Score=430.85 Aligned_cols=218 Identities=30% Similarity=0.435 Sum_probs=192.7
Q ss_pred CccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeecc--
Q 040099 1006 NVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQ-- 1078 (1236)
Q Consensus 1006 ~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~-- 1078 (1236)
+..+.|+|+|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|++
T Consensus 76 ~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 345689999999999743 2469999999999999999999999999999999999997 57999999999997
Q ss_pred cCChHHHhcceEEEcCCCCCChhhHHHHHHHHhh---h--ch--------HHH--hhhhchhhhhcCCCCCCChhHHHHH
Q 040099 1079 KLQVKWLRQQMGVVSQEPVLFSDTIRANIAEMAN---A--NG--------FIS--GLQEGYDTLVGERGVQLSGGQKQRV 1143 (1236)
Q Consensus 1079 ~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~---~--~~--------~i~--~lp~Gldt~vge~G~~LSGGQrQRl 1143 (1236)
.++...+|++++||||+|.+|++|++|||.-... . .+ .+. .+++++++.++++|.+||||||||+
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl 234 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRL 234 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHH
Confidence 4566789999999999999999999999961111 1 11 111 2455678899999999999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1144 AIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1144 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++++|+|||||||||+||+++...+++.|++.++++|+|+|||+++++.. ||||+||++|+|+|.|+|+++...
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999999889999999999999987 999999999999999999999876
Q ss_pred cC
Q 040099 1223 KN 1224 (1236)
Q Consensus 1223 ~~ 1224 (1236)
+.
T Consensus 315 ~~ 316 (329)
T PRK14257 315 PK 316 (329)
T ss_pred CC
Confidence 33
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.3e-46 Score=411.67 Aligned_cols=235 Identities=48% Similarity=0.770 Sum_probs=215.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 356999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 465 LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 465 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
|++|++++|+.|++||+.++.+....+++.++++..++.+++..+|.|+++..+..+.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987654456677778888899999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhHH
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLIR 621 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~~ 621 (1236)
|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++++++.+ .+.|..++.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 9999999999999999999999998778999999999999988999999999999999999999877 677776653
No 116
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.9e-46 Score=372.30 Aligned_cols=207 Identities=30% Similarity=0.558 Sum_probs=186.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH---HHHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL---KWIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 461 (1236)
|+|+||++.|+.. +++|+||||+|++||++-++||||||||||+|+|.+...|+.|+|.++|+|+..++. ..+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999853 679999999999999999999999999999999999999999999999999977654 45899
Q ss_pred ceEEEccCCCCCc-hhHHHHHhcCCC------CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 462 KIGLVSQEPVLLS-SSIRDNIAYGKT------HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~-~ti~~ni~~g~~------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
+||+|+||..|.. .||+||++|... ..-.+++.++++.+++.+-...+|. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 9999999998775 599999999632 1224678889999999999999986 899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeC
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~ 604 (1236)
|||++.+|++||-||||.+|||.+...|++.+.++. .|.||++.||+.+.+.. -.|++.+++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999999885 48999999999999987 56899999999987554
No 117
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.2e-46 Score=384.85 Aligned_cols=223 Identities=35% Similarity=0.541 Sum_probs=193.3
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH---HH
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK---WI 459 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~ 459 (1236)
..|++++|+|+|. ++.+|+||||+|++||+++|+||||||||||+++|.|+..|++|+|+++|+|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 3699999999995 45799999999999999999999999999999999999999999999999999888754 56
Q ss_pred hcceEEEccCCCCCch-hHHHHHhcCCC---CCCHHHHHH----HHHHhccHHH-HHhCCCCccccccCCCCCCChHHHH
Q 040099 460 REKIGLVSQEPVLLSS-SIRDNIAYGKT---HATKEEIQA----AAEAANASHF-IKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~----~~~~~~~~~~-i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
|+++|+++|...||+. ||+||+.|... ..+++++++ .++.+++... .+.+| .+||||++.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~K 152 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRK 152 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHH
Confidence 8999999999999987 99999999633 234455443 3455565554 44444 589999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~ 607 (1236)
|+|||||+..||+|+++|||||+|||.+...+-+.|+++.+ +-|+++|||+++++.. |||++++.||+|+.+|+++|
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~e 232 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEE 232 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHH
Confidence 99999999999999999999999999999999999988864 7899999999999876 89999999999999999999
Q ss_pred ccccccchhhhh
Q 040099 608 LLENPYGAYNRL 619 (1236)
Q Consensus 608 l~~~~~~~y~~~ 619 (1236)
+.+.++..-+++
T Consensus 233 l~~sd~P~v~qf 244 (263)
T COG1127 233 LLASDDPWVRQF 244 (263)
T ss_pred HHhCCCHHHHHH
Confidence 998744433333
No 118
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-46 Score=386.18 Aligned_cols=213 Identities=33% Similarity=0.538 Sum_probs=186.3
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+|+|||++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~~---~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYGN---KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcCC---ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 789999999974 35999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCChh-hHHHHHHH------------HhhhchHHHhhhhchhh--hhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFSD-TIRANIAE------------MANANGFISGLQEGYDT--LVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~------------~a~~~~~i~~lp~Gldt--~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
||-|..-||+- ||.|||+- ...+.++... -|+|. ....-...|||||+||+.+||||..+|+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~l--vgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~i 156 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDL--VGLDPSEYADRYPHELSGGQQQRVGVARALAADPPI 156 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHH--hCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCe
Confidence 99999999965 99999961 1222222221 13432 23445678999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhccCcccH
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLISTKNGIYT 1228 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~ 1228 (1236)
|++|||.+||||.|...+|+-+.+.-+ ++|+|+|||+++... -+|||+||++|+|+.+|+|+++++++...|-
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV 232 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFV 232 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHH
Confidence 999999999999999999999877643 689999999999874 5999999999999999999999998765553
No 119
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6e-46 Score=399.88 Aligned_cols=214 Identities=34% Similarity=0.548 Sum_probs=192.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.++++|++|+|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+.+|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999996 35799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCC-CCchhHHHHHhcCCCCC-------C---HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 464 GLVSQEPV-LLSSSIRDNIAYGKTHA-------T---KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 464 ~~v~Q~~~-l~~~ti~~ni~~g~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
|||||++. -|.-||+|-+.+|+... + .+.+.++++..++.++..+. -..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHHH
Confidence 99999974 46679999999996321 2 23577788888888776543 347999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhH-hhcCeEEEEECCEEEEEeCccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLI-RNANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~-~~ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
.|||||+++|+||+||||||+||...+..+++.++++. +|+|+|+|.|++... +.||++++|++|+++.+|+++|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 369999999999886 569999999999999999999998
Q ss_pred cc
Q 040099 610 EN 611 (1236)
Q Consensus 610 ~~ 611 (1236)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 75
No 120
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.9e-46 Score=414.03 Aligned_cols=216 Identities=33% Similarity=0.559 Sum_probs=195.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|++||.++.+++++. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999631 2999999999999999999999999999999999999999999999999999998874 689
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCCC------CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTHA------TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
|+|+|+..||+- ||+|||+||.... .++++.++++..++.+.+++.|. +||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHH
Confidence 999999999975 9999999985432 25678888999888888888775 89999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
||+++|++++||||+|+||++.+..+...|+++.+ +.|+|.||||...+.. ||||.||++|+|.+.|++.|+..+|.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988754 6799999999988765 99999999999999999999998764
Q ss_pred ch
Q 040099 614 GA 615 (1236)
Q Consensus 614 ~~ 615 (1236)
..
T Consensus 227 n~ 228 (338)
T COG3839 227 NL 228 (338)
T ss_pred ch
Confidence 43
No 121
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-44 Score=446.98 Aligned_cols=203 Identities=27% Similarity=0.378 Sum_probs=167.9
Q ss_pred EeEEEEECCCC-CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC--CCCcEEEECCeecccCChHHHhcce
Q 040099 1013 FLRVSFKYPTR-PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD--PSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1013 f~~Vsf~Y~~~-~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~--~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
++|+.|.-+.+ ..+..|+|||=-++||..+|++|+||||||||++.|.+-.. ..+|+|+|||.+..+ +..++.+
T Consensus 790 w~dl~~~~~~qG~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~ 866 (1391)
T KOG0065|consen 790 WVDLPYEMPIQGGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVS 866 (1391)
T ss_pred EEeCCccccccccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhcccc
Confidence 44444443221 23568999999999999999999999999999999998754 247999999998765 7899999
Q ss_pred EEEcCCC-CCChhhHHHHHH---------------HHhhhchHHHh--hhhchhhhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1090 GVVSQEP-VLFSDTIRANIA---------------EMANANGFISG--LQEGYDTLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1090 ~~V~Qdp-~LF~gTIreNL~---------------~~a~~~~~i~~--lp~Gldt~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
|||.|++ |+=.-||||-|. +..-.++.++- |++=-|..||..|..||..||.||.||--|+.
T Consensus 867 GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G~GLs~eQRKrLTIgVELvA 946 (1391)
T KOG0065|consen 867 GYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPGSGLSTEQRKRLTIGVELVA 946 (1391)
T ss_pred ceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCCCCCCHHHhceeeEEEEEec
Confidence 9999977 555569999985 11223333332 34446889999999999999999999999999
Q ss_pred CC-CEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhh--hhcCEEEEEe-CCEEEEecChhH
Q 040099 1152 EP-KILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTI--KNAHLIAVVS-QGMIVEKGSHES 1218 (1236)
Q Consensus 1152 ~p-~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti--~~aD~I~Vl~-~G~Ive~Gt~~e 1218 (1236)
|| .||+||||||+||+.+...|.+.+++.. .|+||++.=|.++.. +..|+++.|+ +|+.|..|+..+
T Consensus 947 ~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 947 NPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred CCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99 9999999999999999999999999975 689999999999964 6799999997 589999988665
No 122
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-45 Score=388.39 Aligned_cols=198 Identities=35% Similarity=0.536 Sum_probs=174.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.+++++|+++|++ ..||+||||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999964 5799999999999999999999999999999999999999999999999987432 4579
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCCCC------CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKTHA------TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
+||+|++.||+ .||+||+.+|.... ..+.+.+.++.+++.+|-++.|. +||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHH
Confidence 99999999997 69999999986532 13456777778888877777775 89999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEEC--CEEE
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQ--GKIV 600 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~--G~i~ 600 (1236)
||+.+|+||+||||++|||+.|...+++.+.++.+ ++|+++|||+++..- .+|||+||.+ |+|.
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999999999999988753 689999999999875 4999999999 4553
No 123
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6.3e-45 Score=407.15 Aligned_cols=240 Identities=31% Similarity=0.539 Sum_probs=219.0
Q ss_pred CCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH
Q 040099 380 DIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 380 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 459 (1236)
...+.|+++|++++|+.. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 456789999999999742 2469999999999999999999999999999999999999999999999999988888888
Q ss_pred hcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 460 REKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
++.|+||+|++.+|++|++||+..... ...+++.++.+..++.+++..+|.|+++.+++.+.+||||||||++||||++
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999976432 2456677888888999999999999999999999999999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhh
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRL 619 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~ 619 (1236)
++|++|||||||++||+.++..+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+...+.|+++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~ 252 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASL 252 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHH
Confidence 99999999999999999999999999998877899999999999998899999999999999999999987655667766
Q ss_pred HH
Q 040099 620 IR 621 (1236)
Q Consensus 620 ~~ 621 (1236)
+.
T Consensus 253 ~~ 254 (257)
T cd03288 253 VR 254 (257)
T ss_pred Hh
Confidence 54
No 124
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-46 Score=374.19 Aligned_cols=207 Identities=31% Similarity=0.509 Sum_probs=183.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCC-----cEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSS-----GHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~-----G~I~idG~di~~--i~~ 1082 (1236)
.++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|.|+.|..+ |+|.+||.||.+ ++.
T Consensus 7 ~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 5899999999973 469999999999999999999999999999999999999875 999999999965 689
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHH---HH-----hhhch----------HHHhhhhchhhhhcCCCCCCChhHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIA---EM-----ANANG----------FISGLQEGYDTLVGERGVQLSGGQKQRVA 1144 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~---~~-----a~~~~----------~i~~lp~Gldt~vge~G~~LSGGQrQRla 1144 (1236)
-.||+++|+|+|.|.-|+.||+||++ +. ..+++ +|+..++ .+.+.+..|||||+||||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD----rL~~sa~~LSGGQQQRLc 159 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD----RLHKSALGLSGGQQQRLC 159 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH----HhhCCccCCChhHHHHHH
Confidence 99999999999999999999999996 11 11111 1222223 344778889999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1145 IARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1145 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
|||||.-+|+|||||||||||||.+...|.+.|.++.++-|+|+|||.+.-..+ +|+..++-.|+++|+|.-+++..++
T Consensus 160 IARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~P 239 (253)
T COG1117 160 IARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTNP 239 (253)
T ss_pred HHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcCc
Confidence 999999999999999999999999999999999999989999999999998755 9999999999999999999998764
No 125
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-45 Score=362.63 Aligned_cols=209 Identities=35% Similarity=0.580 Sum_probs=188.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
+.+++|.|+|... =-..+++|++||++||+||||||||||+|+++||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~-----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHL-----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcc-----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 5678999999632 2358899999999999999999999999999999999999999999998877665 45799
Q ss_pred EEccCCCCCch-hHHHHHhcCCCC------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKTH------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
+++||..||.- ||++||.+|... ...+.+..++..+++..|.++||. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999975 999999999532 235678899999999999999996 899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|+++-|||+||||+|+|||.-+..+...+.++. ++.|+++|||.++.++. +|+++++++|+|.++|+.++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998885 46799999999999876 999999999999999999998865
No 126
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.2e-45 Score=385.74 Aligned_cols=206 Identities=37% Similarity=0.528 Sum_probs=173.7
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH---H-
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW---I- 459 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~- 459 (1236)
++++||++.|.... ..++|+++||+|++||++||+||||||||||+++|.|+..|++|+|.++|+|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996422 247999999999999999999999999999999999999999999999999999887533 3
Q ss_pred hcceEEEccCCCCCch-hHHHHHhcC----CCCC--CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 460 REKIGLVSQEPVLLSS-SIRDNIAYG----KTHA--TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~-ti~~ni~~g----~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
|++||||+|+..|++. |++|||.+. .... ..+...+.++..++.+... ...+.+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 4679999999999876 999999963 2111 1233444455555544433 134568999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhhcCeEEEEECCEEE
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRNANIIAVIQQGKIV 600 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~ad~i~vl~~G~i~ 600 (1236)
||||||+.+|+|++.||||++||+++.+.|++.+.++. .|+|+|+|||+......|||++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999999984 378999999999999999999999999954
No 127
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-46 Score=417.13 Aligned_cols=216 Identities=34% Similarity=0.566 Sum_probs=195.2
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
..++++||+++|. +..+++|+||+|++||+++++|||||||||++++|+||.+|++|+|.+||+++.+++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999996 45799999999999999999999999999999999999999999999999999998876 578
Q ss_pred eEEEccCCCCCc-hhHHHHHhcCCC---CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 463 IGLVSQEPVLLS-SSIRDNIAYGKT---HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 463 i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
||+|+|+..||+ .||+|||+||.. ... .+++.++++.+++.++-.+.|. +|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHH
Confidence 999999999996 599999999965 112 2467888888888888777764 899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||||..+|++|+||||.||||.+-+..++..++++.+ |.|.|+|||+.+..- .+|||+||++|+|...|+++|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999999999988753 789999999998864 5999999999999999999999987
Q ss_pred ccc
Q 040099 612 PYG 614 (1236)
Q Consensus 612 ~~~ 614 (1236)
|..
T Consensus 228 P~~ 230 (352)
T COG3842 228 PAT 230 (352)
T ss_pred cch
Confidence 643
No 128
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-45 Score=381.56 Aligned_cols=226 Identities=33% Similarity=0.524 Sum_probs=191.2
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC-CHHHHhc
Q 040099 384 DIELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF-QLKWIRE 461 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-~~~~~r~ 461 (1236)
-++++|+++.|+.+. -.++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999997431 11599999999999999999999999999999999999999999999999876543 3446788
Q ss_pred ceEEEccCCC--CCc-hhHHHHHhcCCC----CCCHHHHHHHHHHhccH-HHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 462 KIGLVSQEPV--LLS-SSIRDNIAYGKT----HATKEEIQAAAEAANAS-HFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 462 ~i~~v~Q~~~--l~~-~ti~~ni~~g~~----~~~~~~~~~~~~~~~~~-~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
.|-+|||||. |-+ .||++-|.=+.. ....+++.++++.+++. +|..+.|+ +||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~-----------eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPH-----------ELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCch-----------hcChhHHHHHH
Confidence 9999999996 333 377776653321 22355688888888875 45666664 89999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCc--eEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINR--TTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~--t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
|||||..+|++||||||||+||+..++.|++.|.++.+++ |.|+|||+++.+.+ ||||+||++|+|+|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999999987654 99999999999987 99999999999999999999988
Q ss_pred cccchhhhhH
Q 040099 611 NPYGAYNRLI 620 (1236)
Q Consensus 611 ~~~~~y~~~~ 620 (1236)
.+...|.+..
T Consensus 232 ~~~h~ytr~L 241 (252)
T COG1124 232 HPSHPYTREL 241 (252)
T ss_pred CCccHHHHHH
Confidence 7666776543
No 129
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-45 Score=378.47 Aligned_cols=213 Identities=35% Similarity=0.564 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC---HHHHh
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ---LKWIR 460 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r 460 (1236)
.|+++||+..||+ ++.+|+||||+|++||++||+||||||||||+++|.|+.+|++|+|.++|.++...+ .+.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 468999999999999999999999999999999999999999999999999988776 55678
Q ss_pred cceEEEccCCCCCch-hHHHHHhcCCCC-----------CCHHH---HHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 461 EKIGLVSQEPVLLSS-SIRDNIAYGKTH-----------ATKEE---IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~-----------~~~~~---~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
++|||++|++.|.+. ||.+|+..|+-. .++++ ..++++..++.+. .-.+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHhccCC
Confidence 899999999999875 999999988543 23333 3344455554444 344566899
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEECCEEEEE
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEK 602 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~ 602 (1236)
|||+|||+|||||+++|+|++-|||+|+|||.+.+.+++.|++.. .|.|+|+.-|.++.++. ||||+-|++|+|+.+
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999885 47899999999999875 999999999999999
Q ss_pred eCccccc
Q 040099 603 GTHSELL 609 (1236)
Q Consensus 603 g~~~~l~ 609 (1236)
|+.+|+-
T Consensus 230 g~~~el~ 236 (258)
T COG3638 230 GPASELT 236 (258)
T ss_pred CChhhhh
Confidence 9999964
No 130
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-44 Score=400.94 Aligned_cols=233 Identities=50% Similarity=0.793 Sum_probs=213.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 465 LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 465 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
|++|++.+|+.|++||+.++.+..+.+++.++++.+++.+.+..+|.|+++.++.++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998665566777888888899999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhhhhH
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~~~ 620 (1236)
|||||||++||+.+...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++... .+.|+.++
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHH
Confidence 9999999999999999999999988768899999999999988999999999999999998888765 45555444
No 131
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-44 Score=398.94 Aligned_cols=227 Identities=48% Similarity=0.833 Sum_probs=210.2
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
++|+++|++++|++ .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 36899999999963 2469999999999999999999999999999999999999999999999999988887888899
Q ss_pred eEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 463 IGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 463 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
++|++|++.+|++|++||+.++.+....+++.++++..++.+++..+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999986655667788888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++..+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999998778999999999999888999999999999999988777543
No 132
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-44 Score=400.57 Aligned_cols=231 Identities=55% Similarity=0.908 Sum_probs=211.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999642 236999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 465 LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 465 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998665566677788888899999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccccccchhh
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLENPYGAYN 617 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~ 617 (1236)
+||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++... .+.|+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~ 231 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYA 231 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchh
Confidence 9999999999999999999999998778999999999999988999999999999999999888765 34443
No 133
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.7e-45 Score=419.10 Aligned_cols=221 Identities=33% Similarity=0.522 Sum_probs=189.2
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH---Hh
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW---IR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 460 (1236)
|+++||+++|++.+ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 246999999999999999999999999999999999999999999999999998876544 57
Q ss_pred cceEEEccCCCCCc-hhHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 461 EKIGLVSQEPVLLS-SSIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
++||||||++.+|+ .|++||+.++.. ..+. +++.++++..++.++.. ..+.+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~-----------~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHD-----------SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999986 699999998632 1222 23445555555554443 445689999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
|||||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999854 7899999999999965 99999999999999999999987
Q ss_pred cccchh
Q 040099 611 NPYGAY 616 (1236)
Q Consensus 611 ~~~~~y 616 (1236)
++...+
T Consensus 231 ~p~~~~ 236 (343)
T TIGR02314 231 HPKTPL 236 (343)
T ss_pred CCCcHH
Confidence 644333
No 134
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.2e-41 Score=398.10 Aligned_cols=468 Identities=16% Similarity=0.133 Sum_probs=364.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCCcchH------HHHHHhhHHHHHHHHH
Q 040099 107 SKKFVYLALGAGVASFFQVACWMITGERQAARIRSFYLETILRQDIAFFDKEINTGEV------VGRISGDTLLIQDAIG 180 (1236)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~G~l------~sr~~~D~~~i~~~~~ 180 (1236)
...+..++.+..+....+.|+...+..+.-.-+-..+.++.++..-.|+.. ..|.+ =.|+..|+...-+...
T Consensus 89 l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~--~~~~~~~~dNpDQRi~eDi~~~t~~t~ 166 (604)
T COG4178 89 LQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA--QAGGIGLIDNPDQRIQEDIRNFTETTL 166 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--hcccccCCCChHHhHHHHHHHHHhhHH
Confidence 334444444445555566666666666666666667777777777444433 34432 2699999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---------------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040099 181 EKVGKFIQFGASFIGGFLIAFF---------------KGWLLTLTMLSSIPPLVIAGVVMIKLVGNLASQKQAADSLAAT 245 (1236)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1236)
.....++.++++++...+++.- +...+..++++.+++..++..+++|++.+..-+.++..++...
T Consensus 167 ~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~ 246 (604)
T COG4178 167 DLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY 246 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH
Confidence 7777888887777766655552 2233445556667777778889999999999999999999999
Q ss_pred HHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCcChhHHH
Q 040099 246 VVAQTIGSIRTVASFTGEQQASSIYNKCLVKSYKSSVQEGLATGLGLGASVFIIFSAYGLGVWYGAKLILEKGYSGGDVM 325 (1236)
Q Consensus 246 ~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~~t~g~~~ 325 (1236)
.+.-.-.+...|-.|+.|+.+.++.++......+...+.......+..+......++.++-+..++.....|+++.|.++
T Consensus 247 ~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lm 326 (604)
T COG4178 247 SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLM 326 (604)
T ss_pred HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHH
Confidence 99999999999999999999998887777666665554444444344344344444445555567777889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC------CCccccccCCCC--CCCCCCcEEEEeEEEECCCC
Q 040099 326 SVIFGVLIGSMSLGQASPCLSAFAAGQAAAFKFFEAINRK------PEIDLCCVNGKK--LDDIRGDIELKDVNFSYPAR 397 (1236)
Q Consensus 326 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~------~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~ 397 (1236)
.....+......++.+...+..+..-++...|+.++.+.- ++..... .... ....+..|+++|++..-|+.
T Consensus 327 qa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~nl~l~~p~~ 405 (604)
T COG4178 327 QAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPART-GRRIDFDDNADHGITLENLSLRTPDG 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcc-cccccccccccceeEEeeeeEECCCC
Confidence 9888888888899999999999999999999999986421 1111110 0000 01114679999999998853
Q ss_pred CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhH
Q 040099 398 PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSI 477 (1236)
Q Consensus 398 ~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti 477 (1236)
...+++.||++++||.+-|.||||||||||+|.|+|+++.-+|+|..-. -..+-|+||.|++-.||.
T Consensus 406 --~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtL 472 (604)
T COG4178 406 --QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTL 472 (604)
T ss_pred --CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccH
Confidence 4789999999999999999999999999999999999999999997652 135899999999999999
Q ss_pred HHHHhcCCCC--CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCC
Q 040099 478 RDNIAYGKTH--ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALD 555 (1236)
Q Consensus 478 ~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD 555 (1236)
||-|+|.+.. .+++++.+++.+|++.+++.++.+-. .-...||+|||||+|+||.++++|++++|||+|||||
T Consensus 473 re~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALD 547 (604)
T COG4178 473 REALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALD 547 (604)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccC
Confidence 9999998754 78999999999999999999985422 2345799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEE
Q 040099 556 SESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQ 595 (1236)
Q Consensus 556 ~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~ 595 (1236)
+++|..+.+.+++...+.|+|-|+||.......++.+-++
T Consensus 548 e~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 548 EETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred hHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999888999999999998887766665554
No 135
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.4e-44 Score=400.53 Aligned_cols=227 Identities=61% Similarity=1.024 Sum_probs=208.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|+++.|++..++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997433357999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 465 LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 465 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999997655556677777888888999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999988778899999999999988999999999999999998888765
No 136
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-44 Score=405.23 Aligned_cols=228 Identities=34% Similarity=0.630 Sum_probs=209.5
Q ss_pred CccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH
Q 040099 1006 NVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1006 ~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l 1085 (1236)
...|.|+++|++++|+.. ...+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|++||.++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 356789999999999753 2359999999999999999999999999999999999999999999999999999988899
Q ss_pred hcceEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1086 RQQMGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
|++++|++|+|.+|++|++||+. +..++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999984 1234455677788899999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhh
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLI 1231 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~ 1231 (1236)
+|++|||||||++||++++..+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++++..++.|+.++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999987778999999999999999999999999999999999999987778899888
Q ss_pred hcc
Q 040099 1232 EPH 1234 (1236)
Q Consensus 1232 ~~q 1234 (1236)
..+
T Consensus 254 ~~~ 256 (257)
T cd03288 254 RTD 256 (257)
T ss_pred hcc
Confidence 655
No 137
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-45 Score=392.48 Aligned_cols=215 Identities=38% Similarity=0.652 Sum_probs=194.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecC-CCCHHHHhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLK-EFQLKWIREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~ 462 (1236)
-++++|++|+|+++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999854 57999999999999999999999999999999999999999999999999988 4788899999
Q ss_pred eEEEccCC--CCCchhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 463 IGLVSQEP--VLLSSSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 463 i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
+|||+|+| ++|..||.|.++||..+ .+. +++.++++.+++.++..+.| .+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHh
Confidence 99999999 79999999999999653 233 34667777777777655555 5899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|.+|+.+|++||||||||+||+...+.+.+.++++.+ ++|+|++||+++.+.. ||++++|++|+++.+|++.++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 4799999999999876 999999999999999999888765
No 138
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.8e-44 Score=392.57 Aligned_cols=220 Identities=35% Similarity=0.605 Sum_probs=205.2
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
+.++++|++++|++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 358999999999742 3479999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 463 IGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 463 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
++|++|++.+++.|++||+.+... ...+++.++++..++.+++.++|.|+++..++.+.+||||||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643 4567888889999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeC
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~ 604 (1236)
+++||||||++||+.++..+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999877889999999999998899999999999998875
No 139
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2e-44 Score=399.13 Aligned_cols=221 Identities=49% Similarity=0.843 Sum_probs=201.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999743 246999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
|+||++.+|+.|++||+. +..++.+++..+|.|+++..+..+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 999999999999999985 11234456677788898888889999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEP 1233 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1233 (1236)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|..++..
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~~ 236 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQL 236 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHhc
Confidence 9999999999999999999999998778999999999999988999999999999999999999986 7888887653
No 140
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-44 Score=404.56 Aligned_cols=182 Identities=29% Similarity=0.404 Sum_probs=150.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.+++.+|+|.|++.+. +.+.+++++++.-.++++||++|+||||+++++.+-..|.+|.+-+.+ |.+|
T Consensus 362 ~l~i~~V~f~y~p~~y-~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ri 429 (582)
T KOG0062|consen 362 NLRISYVAFEYTPSEY-QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLRI 429 (582)
T ss_pred eeEEEeeeccCCCcch-hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------ccee
Confidence 6899999999975432 789999999999999999999999999999999999999999998875 6789
Q ss_pred EEEcCCCCCChhhHHHHHHHHhhhchHHHhhh--------------hchhhhhcCCC-CCCChhHHHHHHHHHHHccCCC
Q 040099 1090 GVVSQEPVLFSDTIRANIAEMANANGFISGLQ--------------EGYDTLVGERG-VQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1090 ~~V~Qdp~LF~gTIreNL~~~a~~~~~i~~lp--------------~Gldt~vge~G-~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
+|-.|...=| ++...+.-|+.++.- -|++..+.-.. ..||||||-|+++|-+...+|.
T Consensus 430 ~~f~Qhhvd~-------l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~Ph 502 (582)
T KOG0062|consen 430 KYFAQHHVDF-------LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPH 502 (582)
T ss_pred cchhHhhhhH-------HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCc
Confidence 9999976422 111122222221111 15555554444 5799999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEE
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVE 1212 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive 1212 (1236)
+|+|||||.+||.++-.++-++|+.. +.-||+|||+.+.+.. |+.++|.++|+|.-
T Consensus 503 lLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 503 LLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred EEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 99999999999999999999999875 5689999999999987 99999999999975
No 141
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.1e-43 Score=388.61 Aligned_cols=220 Identities=42% Similarity=0.717 Sum_probs=201.9
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
++++++|++++|++. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999632 2469999999999999999999999999999999999999999999999999887777777889
Q ss_pred eEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 463 IGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 463 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
++|++|++.+|..|++||+.++.+....+++.+.++..++.+.+.++|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999899999999875544566778888889999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEe
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g 603 (1236)
++|||||||++||+.+...+.+.|+++.+++|+|++||+++.++.||++++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988779999999999998754
No 142
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-44 Score=382.44 Aligned_cols=210 Identities=29% Similarity=0.497 Sum_probs=185.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++|+|.+ . ++|+||||++++|++++|+||||||||||+|+|+|+.+|++|+|.+.|.+.+.... +.+|
T Consensus 4 ~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 5899999999963 2 59999999999999999999999999999999999999999999999988765432 4689
Q ss_pred EEEccCC---CCCchhHHHHHhcCCCCC----------CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 464 GLVSQEP---VLLSSSIRDNIAYGKTHA----------TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 464 ~~v~Q~~---~l~~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
|||||.. |-|+.||+|-+.+|+... +.+++.++++.+++.++..+. ...|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~-----------i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQ-----------IGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCc-----------ccccCcHHHH
Confidence 9999965 568899999999985321 247889999999988776442 3479999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
|+.|||||+++|++|+|||||+++|+.++..+.+.|+++++ |+|+++|||+++.+.. +|+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 99999999999999999999999999999999999999965 8999999999999865 9999999 6788899999999
Q ss_pred ccc
Q 040099 609 LEN 611 (1236)
Q Consensus 609 ~~~ 611 (1236)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 874
No 143
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-43 Score=404.50 Aligned_cols=222 Identities=26% Similarity=0.467 Sum_probs=189.5
Q ss_pred CcEEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC------
Q 040099 383 GDIELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF------ 454 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~------ 454 (1236)
.-|+++|++|+|++.. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3589999999997421 24699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcceEEEccCC--CCCchhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccC
Q 040099 455 ----------QLKWIREKIGLVSQEP--VLLSSSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLD-TNVGE 519 (1236)
Q Consensus 455 ----------~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~ 519 (1236)
....+|++|+||+|+| .+|+.|++|||.++.. ..+.++..+. +.+++..+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKL-----AKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCChhHhcC
Confidence 3456889999999998 6899999999998742 2233333221 12445555 564 45778
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHh-hcCeEEEEECC
Q 040099 520 HGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIR-NANIIAVIQQG 597 (1236)
Q Consensus 520 ~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~ad~i~vl~~G 597 (1236)
.+.+||||||||++|||||+++|++|||||||++||+.++..+.+.|.++. +++|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999998874 4789999999999875 59999999999
Q ss_pred EEEEEeCccccccc
Q 040099 598 KIVEKGTHSELLEN 611 (1236)
Q Consensus 598 ~i~~~g~~~~l~~~ 611 (1236)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998765
No 144
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-43 Score=391.34 Aligned_cols=213 Identities=36% Similarity=0.554 Sum_probs=182.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH---HHHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL---KWIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 461 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 469999999999999999999999999999999999999999999999999877654 56788
Q ss_pred ceEEEccCCCCCch-hHHHHHhcCCC---CCCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 462 KIGLVSQEPVLLSS-SIRDNIAYGKT---HATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
.|+||+|++.+|+. |++||+.++.. ..+.++ +.++++..+ +.........+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVG-----------LRGAEDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHHHHHHH
Confidence 99999999999886 99999988632 123322 333344443 333344455689999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999998875 99999999999999999998875
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 4
No 145
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2e-43 Score=405.69 Aligned_cols=212 Identities=32% Similarity=0.519 Sum_probs=183.1
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH---Hh
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW---LR 1086 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~---lR 1086 (1236)
|+++||+++|++.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+.+++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997421 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEcCCCCCCh-hhHHHHHHHHh---h---------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1087 QQMGVVSQEPVLFS-DTIRANIAEMA---N---------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~-gTIreNL~~~a---~---------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
++|+||||++.+|. .|++||+.-.. + +.+.++.+ |+..........||||||||++|||||+.+|
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARAL~~~P 159 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARALASNP 159 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHHhCC
Confidence 89999999999995 69999996211 1 11112211 4544555677899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccC
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~ 1224 (1236)
+|||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++..+.
T Consensus 160 ~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~ 233 (343)
T TIGR02314 160 KVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPK 233 (343)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCC
Confidence 99999999999999999999999998754 7899999999999966 99999999999999999999987643
No 146
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-44 Score=380.47 Aligned_cols=215 Identities=32% Similarity=0.514 Sum_probs=186.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCe---ecCCCCHHHHh
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGV---NLKEFQLKWIR 460 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~---~~~~~~~~~~r 460 (1236)
.|+++|+++.|+. .++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 3788999999963 46999999999999999999999999999999999999999999999999 555433 334
Q ss_pred cceEEEccCCCCCc-hhHHHHHhcCCC------C--CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 461 EKIGLVSQEPVLLS-SSIRDNIAYGKT------H--ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~------~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
++||+|+|+..||. .||+|||+||.+ . ....++.+.++.+++..+-++.| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 68999999999885 699999999962 1 12355666777777776666666 4899999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccc
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l 608 (1236)
+||||||..+|++|+||||+++||++..+.+...|+++.. +.|+++|||+.+.+. .||||+||++|+|...|+++|+
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999988753 789999999999875 5999999999999999999999
Q ss_pred cccccc
Q 040099 609 LENPYG 614 (1236)
Q Consensus 609 ~~~~~~ 614 (1236)
..+|..
T Consensus 226 ~~~P~s 231 (345)
T COG1118 226 YDHPAS 231 (345)
T ss_pred hcCCCc
Confidence 877643
No 147
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.9e-43 Score=386.82 Aligned_cols=220 Identities=49% Similarity=0.817 Sum_probs=198.9
Q ss_pred CCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH
Q 040099 380 DIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 380 ~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~ 459 (1236)
...+.++++|++++|+++.+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 34567999999999975323469999999999999999999999999999999999999999999999999887777777
Q ss_pred hcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 460 REKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
++.++|++|++.+|+.|++||+.++.......++.+.++...+.+++..+|.|+++.+.+.+.+||||||||++|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 88999999999999999999999876544445555556667788999999999999999999999999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEE
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKI 599 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i 599 (1236)
++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999998777899999999999988999999999974
No 148
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-43 Score=407.40 Aligned_cols=218 Identities=31% Similarity=0.500 Sum_probs=189.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999952 24699999999999999999999999999999999999999999999999999877654 4789
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
|||+|++.+|+ .||+|||.|+... .+. +++.++++..++.++..+.| .+||||||||++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 5999999997431 222 34566677777766665555 489999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
||+++|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++..++.
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~ 227 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPA 227 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999999998754 789999999999875 499999999999999999999987754
Q ss_pred chh
Q 040099 614 GAY 616 (1236)
Q Consensus 614 ~~y 616 (1236)
..|
T Consensus 228 ~~~ 230 (356)
T PRK11650 228 STF 230 (356)
T ss_pred cHH
Confidence 333
No 149
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-43 Score=401.04 Aligned_cols=210 Identities=27% Similarity=0.432 Sum_probs=181.7
Q ss_pred cEEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccC-------
Q 040099 1010 EVQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKL------- 1080 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i------- 1080 (1236)
-|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 589999999997421 23599999999999999999999999999999999999999999999999998653
Q ss_pred ---------ChHHHhcceEEEcCCC--CCChhhHHHHHHHH------------hhhchHHHhhhhchh-hhhcCCCCCCC
Q 040099 1081 ---------QVKWLRQQMGVVSQEP--VLFSDTIRANIAEM------------ANANGFISGLQEGYD-TLVGERGVQLS 1136 (1236)
Q Consensus 1081 ---------~~~~lR~~i~~V~Qdp--~LF~gTIreNL~~~------------a~~~~~i~~lp~Gld-t~vge~G~~LS 1136 (1236)
+...+|++++||+|+| .+|+.|++||+.-. ..+.+++..+ |++ ...+..+.+||
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~~LS 178 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKM--GLDDSYLERSPFGLS 178 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHc--CCChhHhcCCcccCC
Confidence 3567899999999998 69999999999511 1122233332 554 45778889999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 040099 1137 GGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1137 GGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~G 1214 (1236)
||||||++|||||+++|+|||||||||+||+.++..+.+.|++.. +++|+|+|||+++.+. .||+|+||++|++++.|
T Consensus 179 gGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g 258 (320)
T PRK13631 179 GGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTG 258 (320)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999998764 5789999999999884 69999999999999999
Q ss_pred ChhHHhh
Q 040099 1215 SHESLIS 1221 (1236)
Q Consensus 1215 t~~eLl~ 1221 (1236)
+|+++.+
T Consensus 259 ~~~~~~~ 265 (320)
T PRK13631 259 TPYEIFT 265 (320)
T ss_pred CHHHHhc
Confidence 9997654
No 150
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.7e-43 Score=385.44 Aligned_cols=212 Identities=38% Similarity=0.610 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCC-----CCCCcEEEECCeecCCCC--HH
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFY-----DPQAGEVLIDGVNLKEFQ--LK 457 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~~~g~~~~~~~--~~ 457 (1236)
|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 478999999963 46999999999999999999999999999999999999 999999999999987766 55
Q ss_pred HHhcceEEEccCCCCCchhHHHHHhcCCCCC---C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 458 WIREKIGLVSQEPVLLSSSIRDNIAYGKTHA---T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
.++++++|++|++.+|..|++||+.++.... . ++++.++++..++.+...+.++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 6788999999999999789999998753211 1 2344555555555444333211 4689999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999998655899999999998865 999999999999999987764
No 151
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-43 Score=404.76 Aligned_cols=215 Identities=32% Similarity=0.534 Sum_probs=187.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+.. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5899999999962 4699999999999999999999999999999999999999999999999999876643 5789
Q ss_pred EEEccCCCCCch-hHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
|||+|++.+|+. ||+|||.|+.. ..+ .+++.++++..++.++..+. +..||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 99999999743 122 23455666666665554443 4589999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
||+.+|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|+|++.|+++++..++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998854 789999999999985 499999999999999999999987654
Q ss_pred c
Q 040099 614 G 614 (1236)
Q Consensus 614 ~ 614 (1236)
.
T Consensus 230 ~ 230 (351)
T PRK11432 230 S 230 (351)
T ss_pred c
Confidence 3
No 152
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-43 Score=363.56 Aligned_cols=220 Identities=31% Similarity=0.523 Sum_probs=186.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh---HHHh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV---KWLR 1086 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~---~~lR 1086 (1236)
.|++++|+++|.++ .||+||||+|++||.+||+|+||||||||++++.|+..|++|+|+++|.|+.+++. ..+|
T Consensus 8 ~I~vr~v~~~fG~~---~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGDR---VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCCE---EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 69999999999754 59999999999999999999999999999999999999999999999999998875 4569
Q ss_pred cceEEEcCCCCCChh-hHHHHHH----HHhhhc-----hHH-Hhhh-hchhhh-hcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1087 QQMGVVSQEPVLFSD-TIRANIA----EMANAN-----GFI-SGLQ-EGYDTL-VGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~g-TIreNL~----~~a~~~-----~~i-~~lp-~Gldt~-vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
+++|+++|+-.||+. ||+||+. +..++. +.+ .+|. -|+... ...-.+.||||.+.|.||||||.-||
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdP 164 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALDP 164 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCC
Confidence 999999999999976 9999985 211111 111 1111 144433 22335689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccHHh
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYTSL 1230 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1230 (1236)
+||++|||||+|||.+...+-+.|+++.. +.|+++|||+++++.. ||||+++.+|+|+..|+++||.+..+...++.
T Consensus 165 ell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~P~v~qf 244 (263)
T COG1127 165 ELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDDPWVRQF 244 (263)
T ss_pred CEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCCHHHHHH
Confidence 99999999999999999999998887653 6899999999999977 89999999999999999999999866655665
Q ss_pred hh
Q 040099 1231 IE 1232 (1236)
Q Consensus 1231 ~~ 1232 (1236)
++
T Consensus 245 ~~ 246 (263)
T COG1127 245 FN 246 (263)
T ss_pred hc
Confidence 54
No 153
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-43 Score=386.77 Aligned_cols=218 Identities=57% Similarity=0.927 Sum_probs=198.4
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++|++++|+++ ..++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999753 235899999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
|+||+|.+|+.|++||+. +..++.+++..+|.|+++.++.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999995 11234566777788899888888999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHh
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSL 1230 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1230 (1236)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 9999999999999999999999998788999999999999988999999999999999999999886 6666654
No 154
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-43 Score=394.92 Aligned_cols=217 Identities=32% Similarity=0.528 Sum_probs=188.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-++++||+++|++....++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742224699999999999999999999999999999999999999999999999999887777888999
Q ss_pred EEEccCCC--CCchhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEPV--LLSSSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+||+|+|. ++..||+|||.++... .+. +++.++++..++.++..+. ..+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 99999983 5567999999987422 222 3455666666665555444 458999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998853 7899999999999878999999999999999998887654
No 155
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.4e-43 Score=382.40 Aligned_cols=207 Identities=40% Similarity=0.677 Sum_probs=191.6
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcc
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQ 1088 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~ 1088 (1236)
|.++++|++++|+.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999743 2369999999999999999999999999999999999999999999999999998888889999
Q ss_pred eEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
++|+||+|.+|++|++||+. +..++.+++..+|.|+++.+++.+.+||||||||++|||||+++|+
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 159 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSK 159 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999984 2334556777889999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecCh
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSH 1216 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~ 1216 (1236)
+|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 160 ILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 99999999999999999999999988778899999999999999999999999999998863
No 156
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1e-42 Score=385.62 Aligned_cols=221 Identities=63% Similarity=1.055 Sum_probs=198.4
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++|++++|+...+.++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 46899999997533346899999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
|++|+|.+|+.|++||+. +..++.+++..+|.|+++.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999984 11234456677888899888888899999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhh
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIE 1232 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~ 1232 (1236)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.++.++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 236 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLVK 236 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHhh
Confidence 9999999999999999999999987778899999999999989999999999999999999999875 555555543
No 157
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-42 Score=384.68 Aligned_cols=220 Identities=54% Similarity=0.838 Sum_probs=200.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++|++++|+.. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999742 35899999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
|++|+|.+|++|++||+. +..++.+.+..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999984 11244556677888999999989999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHhhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSLIEP 1233 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~~~ 1233 (1236)
|||||||++||+++...+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+++++..+ .+.|+.++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 9999999999999999999999988778899999999999988999999999999999999999885 6777777654
No 158
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=359.95 Aligned_cols=473 Identities=19% Similarity=0.204 Sum_probs=357.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCChhHHHHHHHhhHHHHHHHHHHHHH
Q 040099 731 WALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEADHSTGAIGARLSSDAALVRSLVGDTLS 810 (1236)
Q Consensus 731 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~G~l~~rls~D~~~i~~~~~~~l~ 810 (1236)
++..|+++.....+.+.+........+++...++|.++..+++..|+.-+++ ..+++++.++++|+..+. +-...++
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp 126 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLP 126 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhH
Confidence 3444555555555566667777888999999999999999999999999984 789999999999999998 4455677
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHH
Q 040099 811 LLVQNTATAVVGLVIAFKACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQVASDAVSSIRTVASFCAEE 890 (1236)
Q Consensus 811 ~~~~~~~~~v~~~ii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~ 890 (1236)
.+.+.....+++...+.+.++++.+++++.+.+.++..++.+.+..+.....++...+.....+..++|.++++...-..
T Consensus 127 ~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~ 206 (546)
T COG4615 127 ELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERA 206 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHH
Confidence 78888888888999999999999999998888888888888888888888888889999999999999999987543221
Q ss_pred --HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Q 040099 891 --KVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFRVFFALSMTAIGISQTS 968 (1236)
Q Consensus 891 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 968 (1236)
...++|...-+...+...+............+.+.+....+.||+....... +......+.+.+.+.-.|+.++.
T Consensus 207 ~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~---st~~a~tivlvlLflr~pL~s~v 283 (546)
T COG4615 207 EYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGWA---STNVAATIVLVLLFLRTPLLSAV 283 (546)
T ss_pred HHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---hhhHHHHHHHHHHHHhhHHHHHH
Confidence 2222333222222222111112212233344555555556666666544332 22334445566677888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCCccccCccCCccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCC
Q 040099 969 SLASDASKAKSSAASVFGLIDQVSKIDSSEYTGRTLENVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGES 1048 (1236)
Q Consensus 969 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~S 1048 (1236)
..++.+..+..|.+++.++-..++..+...+ .+.|+. ..|+++||.|+|+... --+..||++|++||.|-|+|.+
T Consensus 284 gilP~l~~AqvA~~kiakle~~~~~a~~~~~--q~~p~~-~~lelrnvrfay~~~~--FhvgPiNl~ikrGelvFliG~N 358 (546)
T COG4615 284 GILPTLLTAQVAFNKIAKLELAPYKADFPRP--QAFPDW-KTLELRNVRFAYQDNA--FHVGPINLTIKRGELVFLIGGN 358 (546)
T ss_pred hhhhHHHHHHHHHHHHHHhhcCCccccCCCC--CcCCcc-cceeeeeeeeccCccc--ceecceeeEEecCcEEEEECCC
Confidence 9999999999999999987554333222111 112222 3699999999998532 3488999999999999999999
Q ss_pred CCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHH-HHHHHHhhhchHHHhhhhchhhh
Q 040099 1049 GSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIR-ANIAEMANANGFISGLQEGYDTL 1127 (1236)
Q Consensus 1049 GSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIr-eNL~~~a~~~~~i~~lp~Gldt~ 1127 (1236)
||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++- ||-..--.+..+.+.|.-.-.|.
T Consensus 359 GsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~~e~~as~q~i~~~LqrLel~~kts 438 (546)
T COG4615 359 GSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLGPEGKASPQLIEKWLQRLELAHKTS 438 (546)
T ss_pred CCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhCCccCCChHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999987652 11000001112233332222233
Q ss_pred hcCC---CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhhcCEE
Q 040099 1128 VGER---GVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKNAHLI 1202 (1236)
Q Consensus 1128 vge~---G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~aD~I 1202 (1236)
+..+ ...||-|||.|+|+--|++-+.||+++||=-+--||.=.+...+.+--.. .|+|++.|||+-.-...|||+
T Consensus 439 l~d~~fs~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrl 518 (546)
T COG4615 439 LNDGRFSNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRL 518 (546)
T ss_pred ccCCcccccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHH
Confidence 3222 24699999999999999999999999999999999999999888765433 489999999999999999999
Q ss_pred EEEeCCEEEEec
Q 040099 1203 AVVSQGMIVEKG 1214 (1236)
Q Consensus 1203 ~Vl~~G~Ive~G 1214 (1236)
+-|++|+++|.-
T Consensus 519 l~~~~G~~~e~t 530 (546)
T COG4615 519 LEMRNGQLSELT 530 (546)
T ss_pred HHHhcCceeecc
Confidence 999999999863
No 159
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5.4e-43 Score=404.01 Aligned_cols=207 Identities=34% Similarity=0.516 Sum_probs=180.5
Q ss_pred CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH----hcceEEEccCCCCCch
Q 040099 400 EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI----REKIGLVSQEPVLLSS 475 (1236)
Q Consensus 400 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~~ 475 (1236)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++...+..++ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 569999999999999999999999999999999999999999999999999999888777 7899999999999975
Q ss_pred -hHHHHHhcCCCC--CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEe
Q 040099 476 -SIRDNIAYGKTH--AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLD 548 (1236)
Q Consensus 476 -ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililD 548 (1236)
||+|||.++.+. .+ .+++.++++.+++.+++ ++.+.+||||||||++|||||+.+|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~-----------~~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYE-----------HRYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhh-----------hCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999986432 12 23455556666555444 4445589999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccccccccchhh
Q 040099 549 EATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLENPYGAYN 617 (1236)
Q Consensus 549 E~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~ 617 (1236)
||||+||+.+...+++.+.++. .++|+|+|||+++.+. .||+|++|++|++++.|++++++.++...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 9999999999999999998875 3799999999999864 5999999999999999999999876544443
No 160
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.4e-43 Score=404.07 Aligned_cols=217 Identities=29% Similarity=0.465 Sum_probs=187.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999876654 5789
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
|||+|++.+|+ .||+|||.|+... .+. +++.++++..+ ++......+.+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~-----------L~~~~~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVG-----------LPGSERKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CCchhhCChhhCCHHHHHHHHHHH
Confidence 99999999996 5999999997431 122 23444444444 444445556799999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~ 227 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPA 227 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999998754 99999999999999999999987754
Q ss_pred chh
Q 040099 614 GAY 616 (1236)
Q Consensus 614 ~~y 616 (1236)
..|
T Consensus 228 ~~~ 230 (353)
T TIGR03265 228 TPF 230 (353)
T ss_pred CHH
Confidence 333
No 161
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-42 Score=381.79 Aligned_cols=212 Identities=49% Similarity=0.853 Sum_probs=195.2
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcc
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQ 1088 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~ 1088 (1236)
|.|+++|++++|+.. .++|+|+||+|++||+++|+||||||||||+++|.|+++|.+|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 468999999999742 358999999999999999999999999999999999999999999999999998888889999
Q ss_pred eEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1089 MGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1089 i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
++|+||++.+|++|++||+. +..++.++...+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999985 122445566777889999999889999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999999998765
No 162
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=402.79 Aligned_cols=222 Identities=40% Similarity=0.611 Sum_probs=185.7
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH---Hh
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW---IR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 460 (1236)
|+++|++|+|+.+. ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 357999999999999999999999999999999999999999999999999998876543 47
Q ss_pred cceEEEccCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 461 EKIGLVSQEPVLLS-SSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
++||||+|++.+|. .|++||+.++.. ..+.++..+. +.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKAR-----VTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 88999999999886 699999988632 1222222111 12233333 44444455567899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
|+++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 233 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPK 233 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 9999999999999999999999999999998853 7899999999999876 99999999999999999999976543
No 163
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-42 Score=386.60 Aligned_cols=218 Identities=32% Similarity=0.492 Sum_probs=188.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC---CCCcEEEECCeecCCCCHHHHh
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD---PQAGEVLIDGVNLKEFQLKWIR 460 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r 460 (1236)
.|+++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+....|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 469999999999999999999999999999999999985 7999999999999888777888
Q ss_pred cceEEEccCCCCCchhHHHHHhcCCCC--------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 461 EKIGLVSQEPVLLSSSIRDNIAYGKTH--------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~~ti~~ni~~g~~~--------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
++|+|++|++.+|+.|++||+.++... ..++++.++++..++.+++. +...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVK-------DKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhh-------HHhcCCcccCCHHHHHHH
Confidence 899999999999999999999876311 11223445555555544332 234556779999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
+|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999999877899999999999886 4999999999999999999998754
No 164
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-43 Score=362.81 Aligned_cols=218 Identities=36% Similarity=0.545 Sum_probs=181.6
Q ss_pred cEEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccC-ChHHHhc
Q 040099 1010 EVQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKL-QVKWLRQ 1087 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i-~~~~lR~ 1087 (1236)
-++.+|+++.|+.+. ..++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+.... +....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999998542 12499999999999999999999999999999999999999999999999776543 3457889
Q ss_pred ceEEEcCCCC--CC-hhhHHHHHHHHhhhc----------hHHH--hhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1088 QMGVVSQEPV--LF-SDTIRANIAEMANAN----------GFIS--GLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1088 ~i~~V~Qdp~--LF-~gTIreNL~~~a~~~----------~~i~--~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
.|.+|+|||. |= .-||++-|.+-.+.+ +... .||. .........||||||||+||||||.-+
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~---~~l~R~P~eLSGGQ~QRiaIARAL~~~ 159 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPP---SFLDRRPHELSGGQRQRIAIARALIPE 159 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCH---HHHhcCchhcChhHHHHHHHHHHhccC
Confidence 9999999995 21 247777775444331 2211 1222 234466788999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccHH
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMVDR--TTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYTS 1229 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~--TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1229 (1236)
|++||||||||+||.-..++|++.|.+..+++ |.|+|||+++.+.. ||||+||++|+++|.++-+++.+.+...|.+
T Consensus 160 PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~h~ytr 239 (252)
T COG1124 160 PKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPSHPYTR 239 (252)
T ss_pred CCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCccHHHH
Confidence 99999999999999999999999999887655 99999999999987 9999999999999999999998875556655
Q ss_pred h
Q 040099 1230 L 1230 (1236)
Q Consensus 1230 L 1230 (1236)
.
T Consensus 240 ~ 240 (252)
T COG1124 240 E 240 (252)
T ss_pred H
Confidence 3
No 165
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-42 Score=382.08 Aligned_cols=223 Identities=34% Similarity=0.588 Sum_probs=189.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.++++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEccCCCCCchhHHHHHhcCCCCC--CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 464 GLVSQEPVLLSSSIRDNIAYGKTHA--TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 464 ~~v~Q~~~l~~~ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
+|++|++.+|+.|++||+.++.... ..+++.+.++..++.+ ........+||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999864221 1233444444443321 223455678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccccchhhh
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYGAYNR 618 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~ 618 (1236)
|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 999999999999999999999999998753 7899999999999875 9999999999999999999987654334444
Q ss_pred h
Q 040099 619 L 619 (1236)
Q Consensus 619 ~ 619 (1236)
.
T Consensus 230 ~ 230 (241)
T PRK14250 230 L 230 (241)
T ss_pred H
Confidence 3
No 166
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.6e-43 Score=375.88 Aligned_cols=210 Identities=33% Similarity=0.527 Sum_probs=179.5
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.++.+|++|+|+++ ++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.|+.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~~---~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGGK---PILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECCe---eEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 37899999999844 599999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCC-CCChhhHHHHHH--HHhhhc--------h--HH-Hhhh-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1090 GVVSQEP-VLFSDTIRANIA--EMANAN--------G--FI-SGLQ-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1090 ~~V~Qdp-~LF~gTIreNL~--~~a~~~--------~--~i-~~lp-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
|||||++ .-|.-||+|=+. +..+.. | .+ +.|. -|+.......-..||||||||+.|||||.++|+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~~ 158 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQETP 158 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCCC
Confidence 9999996 455668888764 000000 0 00 1111 134444445567899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhh-hhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTI-KNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti-~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||+||||||+||....-.|++.+++.. +++|+|+|.|+++.. +.||++++|++|+|+.+|+|+|.+..
T Consensus 159 iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 159 ILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 999999999999999999999999986 368999999999876 56999999999999999999998864
No 167
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-42 Score=389.27 Aligned_cols=212 Identities=34% Similarity=0.605 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-|+++|++|+|++ ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+.+..+++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 24699999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEccCC--CCCchhHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEP--VLLSSSIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~--~l~~~ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+||+|+| .++..|++||+.++.. ..+ .+++.++++..++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 5788899999998632 122 234556666666665555444 48999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l 608 (1236)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999999885 4789999999999985 5999999999999999998654
No 168
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.3e-42 Score=401.64 Aligned_cols=217 Identities=32% Similarity=0.543 Sum_probs=189.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+.. +++|
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4699999999999999999999999999999999999999999999999999876654 4689
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCC--CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTH--AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
|||+|++.+|+. ||+|||.|+... .+ .+++.++++..++.++..+.| .+||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 999999987431 12 234566667677666666555 489999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
||+.+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||++..+. .||+|++|++|+|++.|++++++.++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998854 789999999999875 599999999999999999999987754
Q ss_pred chh
Q 040099 614 GAY 616 (1236)
Q Consensus 614 ~~y 616 (1236)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 333
No 169
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-42 Score=382.19 Aligned_cols=212 Identities=32% Similarity=0.491 Sum_probs=181.7
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh---HHHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV---KWLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~---~~lR~ 1087 (1236)
|+++|++++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGGR---TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECCE---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 4789999999743 58999999999999999999999999999999999999999999999999987764 56789
Q ss_pred ceEEEcCCCCCChh-hHHHHHHHHhh-------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1088 QMGVVSQEPVLFSD-TIRANIAEMAN-------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~g-TIreNL~~~a~-------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
.++||||++.+|.. |++||+.-... +.+.++.+ |+.........+||||||||++|||||+++|
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p 155 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARALALDP 155 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999999986 99999852111 01111111 4444445566789999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccH
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYT 1228 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~ 1228 (1236)
+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++... ...|.
T Consensus 156 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~-~~~~~ 232 (235)
T cd03261 156 ELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS-DDPLV 232 (235)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC-CChhh
Confidence 99999999999999999999999998753 7899999999999875 999999999999999999999864 44443
No 170
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-42 Score=391.52 Aligned_cols=217 Identities=28% Similarity=0.509 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC----CCHHH
Q 040099 385 IELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE----FQLKW 458 (1236)
Q Consensus 385 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 458 (1236)
|+++||+|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 1359999999999999999999999999999999999999999999999999853 33566
Q ss_pred HhcceEEEccCC--CCCchhHHHHHhcCCCC--CCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 459 IREKIGLVSQEP--VLLSSSIRDNIAYGKTH--ATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 459 ~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
+|+++|||+|+| .+|..|+.||+.|+... .+.++ +.++++..++. +........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~----------~~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLA----------DEFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCC----------hhhccCCcccCCHHHHH
Confidence 788999999998 78889999999987432 22332 33333333332 12334556799999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l 608 (1236)
|++|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998875 4789999999999885 5999999999999999999998
Q ss_pred ccc
Q 040099 609 LEN 611 (1236)
Q Consensus 609 ~~~ 611 (1236)
..+
T Consensus 232 ~~~ 234 (288)
T PRK13643 232 FQE 234 (288)
T ss_pred HcC
Confidence 754
No 171
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-42 Score=388.31 Aligned_cols=214 Identities=30% Similarity=0.511 Sum_probs=186.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+.+|.+. . +|+|+||+|+.||.++|+|||||||||++++|.||.+|++|+|.|||.|++++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~--~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF--E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc--e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999753 1 899999999999999999999999999999999999999999999999999999876 789
Q ss_pred EEEcCCCCCChh-hHHHHHH---HHh-----hhchHHHhhh--hchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIA---EMA-----NANGFISGLQ--EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLL 1158 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~---~~a-----~~~~~i~~lp--~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlL 1158 (1236)
|+|+|+..||+- ||+|||+ +.. ....-+.... -+++..+.....+||||||||+||||||+++|++++|
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEe
Confidence 999999999986 9999996 221 1111111111 1566667788899999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccH
Q 040099 1159 DEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYT 1228 (1236)
Q Consensus 1159 DEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~ 1228 (1236)
|||.|+||+.....+..-|+++.+ +.|+|.|||+...+.. +|||+||.+|+|.+.|+|.|+..++...|-
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~fV 230 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLFV 230 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchhh
Confidence 999999999999999999988653 5799999999998876 999999999999999999999988766553
No 172
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-42 Score=383.91 Aligned_cols=222 Identities=27% Similarity=0.489 Sum_probs=186.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH-hcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI-REKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 463 (1236)
++++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 469999999999999999999999999999999999999999999999999987776544 5679
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCCCCHHHH-------HHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTHATKEEI-------QAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+|++|++.+|.. |++||+.++........+ ........+++.++.+ |++...+....+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999886 999999886432110000 0000111234455555 666667777889999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999999876 57899999999999865 999999999999999998887653
No 173
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-42 Score=389.55 Aligned_cols=218 Identities=32% Similarity=0.556 Sum_probs=184.7
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC--HHHHh
Q 040099 385 IELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ--LKWIR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--~~~~r 460 (1236)
|+++||+|+|+... .+++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999997653 35678
Q ss_pred cceEEEccCC--CCCchhHHHHHhcCCC--CCCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 461 EKIGLVSQEP--VLLSSSIRDNIAYGKT--HATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 461 ~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
++||||||+| .+|+.|++|||.++.. ..+.++ +.++++.+++. +.+.....+..||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 8999999998 5788999999998632 223333 33444444332 11345566779999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998853 789999999999885 59999999999999999998886
Q ss_pred cc
Q 040099 610 EN 611 (1236)
Q Consensus 610 ~~ 611 (1236)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 54
No 174
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.4e-42 Score=399.90 Aligned_cols=217 Identities=33% Similarity=0.527 Sum_probs=186.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||+++.+.+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3789999999963 469999999999999999999999999999999999999999999999999976554 35789
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCC------CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTH------ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~------~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
+||+|++.+|+. |++|||.|+... .+. +++.++++..++.++. .....+||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-----------DRYPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHH
Confidence 999999999974 999999987431 122 2344555555554443 344568999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
+|||||+++|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998864 6899999999998765 9999999999999999999998
Q ss_pred ccccchh
Q 040099 610 ENPYGAY 616 (1236)
Q Consensus 610 ~~~~~~y 616 (1236)
.++...|
T Consensus 226 ~~p~~~~ 232 (353)
T PRK10851 226 REPATRF 232 (353)
T ss_pred hCccchH
Confidence 7654433
No 175
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=357.66 Aligned_cols=208 Identities=36% Similarity=0.533 Sum_probs=179.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC---hHHHh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ---VKWLR 1086 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~---~~~lR 1086 (1236)
.|+++||+..||+. ..+|+||||+|++||.|||+||||||||||+++|.|+.+|++|+|.++|.++...+ +..+|
T Consensus 3 ~i~~~nl~k~yp~~--~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPGG--HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCCC--ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 48999999999853 57999999999999999999999999999999999999999999999999998887 67788
Q ss_pred cceEEEcCCCCCChh-hHHHHHH--------------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHH
Q 040099 1087 QQMGVVSQEPVLFSD-TIRANIA--------------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAI 1145 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~g-TIreNL~--------------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaL 1145 (1236)
++||+|+|++-|-+. |+.+|+. +...+.+-.+.+ |+--..-.+..+|||||+||++|
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLerv--gi~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERV--GILDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHc--CcHHHHHHHhccCCcchhHHHHH
Confidence 999999999988765 9999984 122222222211 22222235667899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1146 ARAIVKEPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1146 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
||||.++|+|+|-|||+|+|||.+.+.|++.|++.. .|.|+|+.-|.++..+. ||||+-|++|+|+-.|+++||-+
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 999999999999999999999999999999999875 46899999999999976 99999999999999999999643
No 176
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.2e-42 Score=362.97 Aligned_cols=202 Identities=35% Similarity=0.524 Sum_probs=169.8
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH---HH-
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK---WL- 1085 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~---~l- 1085 (1236)
++++||+..|.... ...+|+++||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++.+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 56899999996432 24699999999999999999999999999999999999999999999999999988743 33
Q ss_pred hcceEEEcCCCCCChh-hHHHHHH---HHhh-----hchHHHhhh-h-chhhhhc-CCCCCCChhHHHHHHHHHHHccCC
Q 040099 1086 RQQMGVVSQEPVLFSD-TIRANIA---EMAN-----ANGFISGLQ-E-GYDTLVG-ERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~g-TIreNL~---~~a~-----~~~~i~~lp-~-Gldt~vg-e~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
|++||+|+|+..|++. |++||+. ...+ ..+.+..+- . |+..... ....+||||||||+||||||+.+|
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P 161 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNP 161 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCC
Confidence 5679999999998865 9999985 1111 111222221 1 4543333 567899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEE
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVE 1212 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive 1212 (1236)
+|++.||||.|||++|.+.|.+.+++..+ |+|+|+|||+......|||++.|.||++.+
T Consensus 162 ~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 162 KIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred CeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999998853 689999999999999999999999999543
No 177
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-42 Score=384.11 Aligned_cols=223 Identities=32% Similarity=0.485 Sum_probs=188.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 456 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|+++|+++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5899999999963 4699999999999999999999999999999999999997 49999999998853 344
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC---CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH---AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+|++|+|++|++.+|+.|++|||.++... .. ++++.++++.+++.+.+ ++ .....+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~----~~~~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KD----KLNTNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HH----HHhCCcccCCHHHH
Confidence 5678899999999999989999999986321 11 23345555555543322 12 23345678999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999865 999999999999999999999
Q ss_pred cccccchh
Q 040099 609 LENPYGAY 616 (1236)
Q Consensus 609 ~~~~~~~y 616 (1236)
..++...|
T Consensus 237 ~~~~~~~~ 244 (254)
T PRK14273 237 FFNPKNTK 244 (254)
T ss_pred HhCCCChH
Confidence 86544444
No 178
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.4e-42 Score=400.14 Aligned_cols=216 Identities=29% Similarity=0.464 Sum_probs=186.6
Q ss_pred CCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCC--cEEEECCeecCCCCHHHH
Q 040099 382 RGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQA--GEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~~~g~~~~~~~~~~~ 459 (1236)
.+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.+. .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 357999999999963 469999999999999999999999999999999999999999 999999999976655 3
Q ss_pred hcceEEEccCCCCCch-hHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 460 REKIGLVSQEPVLLSS-SIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
++.|+||+|++.+|+. ||+|||.|+.. ..+. +++.++++..++.++..+ ...+||||||||+
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~-----------~~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAH-----------LPAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhC-----------ChhhCCHHHHHHH
Confidence 5689999999999965 99999998642 1222 234555555555544444 4458999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc---CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI---NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||||||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~ 226 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQAL 226 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999999999999988754 6899999999999755 999999999999999999999
Q ss_pred ccccc
Q 040099 609 LENPY 613 (1236)
Q Consensus 609 ~~~~~ 613 (1236)
..++.
T Consensus 227 ~~~p~ 231 (362)
T TIGR03258 227 YDAPA 231 (362)
T ss_pred HhCcC
Confidence 87653
No 179
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.4e-42 Score=382.46 Aligned_cols=218 Identities=35% Similarity=0.561 Sum_probs=185.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeecCCC--CHH
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ-----AGEVLIDGVNLKEF--QLK 457 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~~ 457 (1236)
++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998753 355
Q ss_pred HHhcceEEEccCCCCCchhHHHHHhcCCCC---CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 458 WIREKIGLVSQEPVLLSSSIRDNIAYGKTH---ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
.++++|+|++|++.+|+.|++||+.++... .+. +++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 678899999999999999999999875321 122 23444455555442221 3345566799999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
|++|||||+.+|+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999998865 9999999999999999999887
Q ss_pred ccc
Q 040099 610 ENP 612 (1236)
Q Consensus 610 ~~~ 612 (1236)
..+
T Consensus 232 ~~~ 234 (247)
T TIGR00972 232 TNP 234 (247)
T ss_pred hCC
Confidence 643
No 180
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.8e-42 Score=377.76 Aligned_cols=203 Identities=32% Similarity=0.537 Sum_probs=173.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH---HHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK---WIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 461 (1236)
|+++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999632 24699999999999999999999999999999999999999999999999998766543 3678
Q ss_pred ceEEEccCCCCCc-hhHHHHHhcCCCC--C----CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 462 KIGLVSQEPVLLS-SSIRDNIAYGKTH--A----TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
+++|++|++.+|. .|++||+.++... . .++++.++++..++.++..+ ...+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHA-----------LPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHH
Confidence 9999999999886 5999999875211 1 12345556666655544443 345899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEE
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKI 599 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i 599 (1236)
||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 47899999999999875 999999999975
No 181
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-42 Score=381.61 Aligned_cols=211 Identities=33% Similarity=0.517 Sum_probs=179.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876543 256899
Q ss_pred EEccCCCCCc-hhHHHHHhcCCCCC------CH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKTHA------TK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~~~------~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
||+|++.+|. .|++||+.++.... .. +++.++++.. |++........+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLV-----------QLDWLADRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHc-----------CChhhhhcChhhCCHHHHHHHH
Confidence 9999999886 59999999863211 11 1233333333 3444445556689999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
|||||+.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998853 7899999999998765 99999999999999999998875
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 4
No 182
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-42 Score=388.80 Aligned_cols=220 Identities=29% Similarity=0.542 Sum_probs=186.8
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC----CHHH
Q 040099 385 IELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF----QLKW 458 (1236)
Q Consensus 385 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 458 (1236)
++++||+|+|++.. .+++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996322 24699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhcceEEEccCC--CCCchhHHHHHhcCCCC--CCHHHHHHHHHHhccHHHHHhCCCCccc-cccCCCCCCChHHHHHHH
Q 040099 459 IREKIGLVSQEP--VLLSSSIRDNIAYGKTH--ATKEEIQAAAEAANASHFIKNLPQGLDT-NVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 459 ~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~g~~g~~LSgGqkqRia 533 (1236)
+|++||||+|+| .+|..|+.|||.++... .+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999997 68888999999987422 233333222 22344444 6663 456678899999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999885 3789999999999885 599999999999999999988876
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 183
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.9e-42 Score=401.50 Aligned_cols=214 Identities=27% Similarity=0.490 Sum_probs=189.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|+++|.++.+++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 3899999999963 5799999999999999999999999999999999999999999999999999998888899999
Q ss_pred EEEccCCCC-CchhHHHHHhcCCCC----------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 464 GLVSQEPVL-LSSSIRDNIAYGKTH----------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 464 ~~v~Q~~~l-~~~ti~~ni~~g~~~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
|||+|++.+ |+.|++||+.+++.. ...+++.++++..++.++.. ....+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHH
Confidence 999999987 567999999987521 11234666667666655543 33468999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
+|||||+++|++|||||||++||+.+...+++.|+++. +++|+|++||+++.+. .|||+++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999886 4789999999999995 599999999999999999999886
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 4
No 184
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-42 Score=383.91 Aligned_cols=218 Identities=31% Similarity=0.534 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 456 (1236)
.|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 469999999999999999999999999999999999975 689999999999864 345
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCC--CC-C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HA-T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+|++|+|++|++.+|+.|++||+.++.. .. . .+++.++++.+++.+++. +..+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHHH
Confidence 567889999999999998999999987531 11 1 234555566555543332 234566779999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999865 999999999999999999998
Q ss_pred ccc
Q 040099 609 LEN 611 (1236)
Q Consensus 609 ~~~ 611 (1236)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 765
No 185
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-42 Score=382.99 Aligned_cols=222 Identities=32% Similarity=0.545 Sum_probs=189.0
Q ss_pred CCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--C
Q 040099 382 RGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--F 454 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 454 (1236)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 456999999999963 469999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHHhcceEEEccCCCCCchhHHHHHhcCCC---CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChH
Q 040099 455 QLKWIREKIGLVSQEPVLLSSSIRDNIAYGKT---HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGG 527 (1236)
Q Consensus 455 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 527 (1236)
+...+|++|+|++|++.+|+.|++||+.++.. ..+. +++.++++..++.+.+ .+..++...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHH
Confidence 45677889999999999999999999987632 1222 3344555555543222 23456677899999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcc
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~ 606 (1236)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred ccccccc
Q 040099 607 ELLENPY 613 (1236)
Q Consensus 607 ~l~~~~~ 613 (1236)
++...+.
T Consensus 241 ~~~~~~~ 247 (260)
T PRK10744 241 TIFTKPA 247 (260)
T ss_pred HHHhCCC
Confidence 9876533
No 186
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-42 Score=390.17 Aligned_cols=217 Identities=29% Similarity=0.510 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC----CCHHH
Q 040099 385 IELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE----FQLKW 458 (1236)
Q Consensus 385 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~ 458 (1236)
++++|++|+|++.. ..++|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 1469999999999999999999999999999999999999999999999999853 34556
Q ss_pred HhcceEEEccCC--CCCchhHHHHHhcCCCC--CCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 459 IREKIGLVSQEP--VLLSSSIRDNIAYGKTH--ATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 459 ~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
.|++||||+|+| .+|+.|++|||.++... .+.++ +.++++.+++.+ ......+.+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 788999999998 68888999999987421 23332 333444443321 2234556789999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~ 607 (1236)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+ |.|+|+|||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998853 789999999999986 499999999999999999988
Q ss_pred cccc
Q 040099 608 LLEN 611 (1236)
Q Consensus 608 l~~~ 611 (1236)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 187
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-42 Score=381.10 Aligned_cols=212 Identities=35% Similarity=0.590 Sum_probs=181.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC---HHHHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ---LKWIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~ 461 (1236)
++++|++++|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 146999999999999999999999999999999999999999999999999998766 456788
Q ss_pred ceEEEccCCCCCc-hhHHHHHhcCCCCC-----------C---HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 462 KIGLVSQEPVLLS-SSIRDNIAYGKTHA-----------T---KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~-~ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
.++|++|++.+|. .|++||+.++.... . .+++.+ .+..+ |++......+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~--~l~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALA---------ALERV--GLLDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHH---------HHHHc--CChhhhCCCcccCCH
Confidence 9999999998887 59999998753210 1 112223 33333 444455666779999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHh-hcCeEEEEECCEEEEEe
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g 603 (1236)
|||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3789999999999997 59999999999999999
Q ss_pred Cccccc
Q 040099 604 THSELL 609 (1236)
Q Consensus 604 ~~~~l~ 609 (1236)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 988763
No 188
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-42 Score=378.30 Aligned_cols=216 Identities=33% Similarity=0.576 Sum_probs=187.3
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.++++|++++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.|+...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFGK---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCCe---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 48899999999743 589999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCCCCChhhHHHHHHHH--------hhhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 040099 1090 GVVSQEPVLFSDTIRANIAEM--------ANANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDE 1160 (1236)
Q Consensus 1090 ~~V~Qdp~LF~gTIreNL~~~--------a~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDE 1160 (1236)
+|+||+|.+|+.|++||+.-. ..+.+++..+ |++ ........+||||||||++||||++++|++|||||
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDE 157 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDE 157 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999999999999998511 1122233322 443 23456778999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccHHh
Q 040099 1161 ATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYTSL 1230 (1236)
Q Consensus 1161 aTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1230 (1236)
||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|++++++..+...|.+.
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 230 (241)
T PRK14250 158 PTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKL 230 (241)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHH
Confidence 999999999999999999875 37899999999999875 99999999999999999999987544345443
No 189
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-42 Score=374.94 Aligned_cols=203 Identities=35% Similarity=0.555 Sum_probs=172.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCCCCCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|. .|++||+.++... ... +++.++++..++ +........+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGL-----------EGLLNRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999998886 5999999875321 122 233344444444 434444556899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
|+++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999998765 9999999999998765
No 190
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.8e-42 Score=393.10 Aligned_cols=226 Identities=27% Similarity=0.414 Sum_probs=189.2
Q ss_pred cEEEEeEEEECCCCC----------CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC
Q 040099 384 DIELKDVNFSYPARP----------DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE 453 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~----------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~ 453 (1236)
-|+++|++++|+.+. ..++++||||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988
Q ss_pred CCHHH---HhcceEEEccCC--CCCc-hhHHHHHhcCC----CCCCHHHH----HHHHHHhccHHHHHhCCCCccccccC
Q 040099 454 FQLKW---IREKIGLVSQEP--VLLS-SSIRDNIAYGK----THATKEEI----QAAAEAANASHFIKNLPQGLDTNVGE 519 (1236)
Q Consensus 454 ~~~~~---~r~~i~~v~Q~~--~l~~-~ti~~ni~~g~----~~~~~~~~----~~~~~~~~~~~~i~~l~~g~~t~~g~ 519 (1236)
.+... +|++|+||+|+| .|++ .||.|||.++. +..+.++. .++++.+++. +.....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~----------~~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLL----------PNLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC----------hHHhcC
Confidence 76543 577899999998 4664 69999997632 12333333 3333333331 123455
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEEC
Q 040099 520 HGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQ 596 (1236)
Q Consensus 520 ~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~ 596 (1236)
.+.+||||||||++|||||+.+|++||+||||++||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6679999999999999999999999999999999999999999999998854 7899999999999976 999999999
Q ss_pred CEEEEEeCcccccccccchhhhh
Q 040099 597 GKIVEKGTHSELLENPYGAYNRL 619 (1236)
Q Consensus 597 G~i~~~g~~~~l~~~~~~~y~~~ 619 (1236)
|+|++.|+.++++.++...|.+.
T Consensus 238 G~ive~g~~~~i~~~~~~py~~~ 260 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTKA 260 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHHH
Confidence 99999999999988766667663
No 191
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-42 Score=371.21 Aligned_cols=211 Identities=34% Similarity=0.595 Sum_probs=184.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecc-cCChHHHhcc
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQ-KLQVKWLRQQ 1088 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~-~i~~~~lR~~ 1088 (1236)
-++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999876 47999999999999999999999999999999999999999999999999998 4789999999
Q ss_pred eEEEcCCC--CCChhhHHHHHH---H-----HhhhchHHHh-hh-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1089 MGVVSQEP--VLFSDTIRANIA---E-----MANANGFISG-LQ-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1089 i~~V~Qdp--~LF~gTIreNL~---~-----~a~~~~~i~~-lp-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+|+|+|+| .+|..||.|.++ + ...+...+.. +. -|+.........+||||||||+|||.+|..+|+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~il 160 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEIL 160 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCEE
Confidence 99999999 899999999986 0 0011111110 00 13433455677899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVMVD--RTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~~~--~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||||+||+...+.+.+.++++.+. .|+|+|||+++.+.. |||++||++|+++.+|+|+++.++
T Consensus 161 iLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 161 LLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred EEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999998654 699999999999987 999999999999999999999886
No 192
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-42 Score=389.26 Aligned_cols=216 Identities=28% Similarity=0.467 Sum_probs=181.9
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC---------
Q 040099 385 IELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE--------- 453 (1236)
Q Consensus 385 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--------- 453 (1236)
|+++||+|+|++.. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999997421 1369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHHhcceEEEccCC--CCCchhHHHHHhcCCC--CCCHHH----HHHHHHHhccHHHHHhCC
Q 040099 454 ---------------FQLKWIREKIGLVSQEP--VLLSSSIRDNIAYGKT--HATKEE----IQAAAEAANASHFIKNLP 510 (1236)
Q Consensus 454 ---------------~~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~----~~~~~~~~~~~~~i~~l~ 510 (1236)
.+...+|++||||+|+| .+|..||+|||.|+.. ..+.++ +.++++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~---------- 152 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELV---------- 152 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHc----------
Confidence 13456788999999986 6788899999998743 223333 33334443
Q ss_pred CCcc-ccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHh-h
Q 040099 511 QGLD-TNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIR-N 587 (1236)
Q Consensus 511 ~g~~-t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~ 587 (1236)
|++ ........+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .
T Consensus 153 -gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 153 -GLDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -CCChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 343 23456667999999999999999999999999999999999999999999998875 4789999999999875 5
Q ss_pred cCeEEEEECCEEEEEeCccccccc
Q 040099 588 ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 588 ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||||++|++|++++.|+.+++..+
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999988765
No 193
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.3e-42 Score=375.37 Aligned_cols=211 Identities=25% Similarity=0.455 Sum_probs=178.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++||++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999632 25699999999999999999999999999999999999999999999999998654 356678899
Q ss_pred EEccCCCCC-chhHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLL-SSSIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~-~~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
||+|++.++ ..|++||+.++.. .... +++.++++..++. ........+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLT-----------DKANKRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----------HHHhChhhhCCHHHHHHHHHHHH
Confidence 999999988 4699999987421 1122 2333444444433 33344456899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998777999999999999865 999999999999999988765
No 194
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-42 Score=395.33 Aligned_cols=215 Identities=33% Similarity=0.521 Sum_probs=184.2
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH---Hh
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW---LR 1086 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~---lR 1086 (1236)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999997311 246999999999999999999999999999999999999999999999999998877544 57
Q ss_pred cceEEEcCCCCCCh-hhHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1087 QQMGVVSQEPVLFS-DTIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~-gTIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
++|+||||++.+|. .|++||+.-.. .+.++++.+ |++........+||||||||++|||||+++|
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p 159 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARALASNP 159 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHHcCC
Confidence 89999999999886 69999995211 111222222 5555556677889999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...+
T Consensus 160 ~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 236 (343)
T PRK11153 160 KVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPL 236 (343)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 99999999999999999999999998753 7899999999999876 99999999999999999999987643333
No 195
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-42 Score=385.76 Aligned_cols=216 Identities=32% Similarity=0.560 Sum_probs=188.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-++++||+++|+.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999632 34699999999999999999999999999999999999999999999999999887777788899
Q ss_pred EEEccCC--CCCchhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEP--VLLSSSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+|++|++ .+++.|++|||.++... .+. +++.++++..++.+++.+.| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 45677999999986321 122 33555666666666555544 48999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998864 7899999999999888999999999999999999888764
No 196
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-41 Score=367.58 Aligned_cols=203 Identities=32% Similarity=0.575 Sum_probs=180.7
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
+.++++|++++|+.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|++
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999742 2469999999999999999999999999999999999999999999999999988888888889
Q ss_pred eEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 463 IGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 463 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
|+||+|++.+|++|++||+.+... .+.+++.++++ +++++..||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999987543 33444433332 34567799999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEeCc
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~ 605 (1236)
+++||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999988778999999999999878999999999999988753
No 197
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=7.4e-42 Score=380.13 Aligned_cols=212 Identities=33% Similarity=0.559 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH---HHHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL---KWIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 461 (1236)
|+++||+++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 3469999999999999999999999999999999999999999999999999877654 34678
Q ss_pred ceEEEccCCCCCc-hhHHHHHhcCCCCC-----------C---HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 462 KIGLVSQEPVLLS-SSIRDNIAYGKTHA-----------T---KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~-~ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
+++|++|++.+|. .|++||+.++.... . .+++.+++ ..+ |++......+.+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~--~l~~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSAL---------ERV--GLADKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHH---------HHc--CcHhhhcCCcccCCH
Confidence 8999999998886 59999998764211 1 11233333 333 444445566779999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
|||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999854 9999999999999999
Q ss_pred Cccccc
Q 040099 604 THSELL 609 (1236)
Q Consensus 604 ~~~~l~ 609 (1236)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 988863
No 198
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.3e-41 Score=378.69 Aligned_cols=239 Identities=26% Similarity=0.425 Sum_probs=204.1
Q ss_pred HHHHHHhccCCCccccccCCCCCCCCCCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHc
Q 040099 356 FKFFEAINRKPEIDLCCVNGKKLDDIRGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQR 435 (1236)
Q Consensus 356 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 435 (1236)
+.+.+++..+++.++. .+.+...+.|+++|+++.. +++|+|+||+|++||+++|+||||||||||+++|+|
T Consensus 15 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~G 85 (282)
T cd03291 15 EGFGELLEKAKQENND----RKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILG 85 (282)
T ss_pred HHHHHHHhcccccccc----cccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 4556667665543321 2233445679999999952 359999999999999999999999999999999999
Q ss_pred CCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccc
Q 040099 436 FYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDT 515 (1236)
Q Consensus 436 ~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 515 (1236)
+++|++|+|.++| .|+|++|++.+|+.|++||+.++... ...++.++++.+++.+.+..+|.++++
T Consensus 86 l~~p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~ 151 (282)
T cd03291 86 ELEPSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNT 151 (282)
T ss_pred CCCCCCcEEEECC-------------EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhccccccc
Confidence 9999999999998 49999999999999999999986432 344566777778888999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHH-HHHccCceEEEEecCchhHhhcCeEEEE
Q 040099 516 NVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEAL-DRVMINRTTVIVSHRLSLIRNANIIAVI 594 (1236)
Q Consensus 516 ~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~~~~~~~ad~i~vl 594 (1236)
.+++++.+||||||||++|||||+.+|++|||||||++||+.+...+.+.+ +++.+++|+|++||+++.+..||++++|
T Consensus 152 ~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l 231 (282)
T cd03291 152 VLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILIL 231 (282)
T ss_pred eecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999888754 5666688999999999999889999999
Q ss_pred ECCEEEEEeCcccccccccchhhh
Q 040099 595 QQGKIVEKGTHSELLENPYGAYNR 618 (1236)
Q Consensus 595 ~~G~i~~~g~~~~l~~~~~~~y~~ 618 (1236)
++|++++.|+++++... ...|.+
T Consensus 232 ~~G~i~~~g~~~~~~~~-~~~~~~ 254 (282)
T cd03291 232 HEGSSYFYGTFSELQSL-RPDFSS 254 (282)
T ss_pred ECCEEEEECCHHHHHhc-chHHHH
Confidence 99999999999998764 334443
No 199
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-42 Score=386.86 Aligned_cols=218 Identities=35% Similarity=0.532 Sum_probs=183.6
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH----hc
Q 040099 386 ELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI----RE 461 (1236)
Q Consensus 386 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~ 461 (1236)
.++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 5678888885 3469999999999999999999999999999999999999999999999999987665443 46
Q ss_pred ceEEEccCCCCCc-hhHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 462 KIGLVSQEPVLLS-SSIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
+++|++|++.+|. .|++||+.++.. ... .+++.++++..++.+++.+.| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 7999999999885 599999987521 111 234555566666655554444 5899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||||+++|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998753 7899999999998865 999999999999999999999865
Q ss_pred ccchhh
Q 040099 612 PYGAYN 617 (1236)
Q Consensus 612 ~~~~y~ 617 (1236)
+...|.
T Consensus 252 ~~~~~~ 257 (269)
T cd03294 252 PANDYV 257 (269)
T ss_pred cCcHHH
Confidence 444444
No 200
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-42 Score=399.23 Aligned_cols=214 Identities=29% Similarity=0.487 Sum_probs=184.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999776543 5689
Q ss_pred EEEccCCCCCch-hHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
+||+|++.+|+. |++|||.|+.. ..+. +++.++++..++.++. .....+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHH
Confidence 999999999965 99999998742 1222 2344555555554443 4445689999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
||+.+|++||||||||+||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998753 7899999999998765 99999999999999999999877643
No 201
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-42 Score=383.52 Aligned_cols=220 Identities=33% Similarity=0.518 Sum_probs=187.8
Q ss_pred CCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCC--C
Q 040099 382 RGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKE--F 454 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~ 454 (1236)
.+.|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|+++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 4699999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcceEEEccCCCCCchhHHHHHhcCCC--CC--C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 455 QLKWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HA--T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 455 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
+...+|+.++|++|++.+|+.|+.||+.++.. .. + .+++.++++..++.+++. +..+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 45567889999999999998899999987531 10 1 233455555555543321 234556778999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCc
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~ 605 (1236)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999865 999999999999999999
Q ss_pred cccccc
Q 040099 606 SELLEN 611 (1236)
Q Consensus 606 ~~l~~~ 611 (1236)
+++..+
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 988754
No 202
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-42 Score=376.78 Aligned_cols=216 Identities=37% Similarity=0.574 Sum_probs=182.0
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH---HHh
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK---WIR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 460 (1236)
|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999996421 12699999999999999999999999999999999999999999999999998776543 347
Q ss_pred cceEEEccCCCCCc-hhHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 461 EKIGLVSQEPVLLS-SSIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
+.++|++|++.+|. .|++||+.++.. .... +++.++++.. |++........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELV-----------GLEDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC-----------CChhhhhcChhhCCHHHHHHHH
Confidence 78999999999997 599999987532 1121 2233344444 4444444556789999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
||||++.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999865 99999999999999999888764
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 3
No 203
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.3e-42 Score=376.02 Aligned_cols=206 Identities=35% Similarity=0.564 Sum_probs=176.9
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhccc-----CCCCcEEEECCeecccCC--hH
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFY-----DPSSGHITLDGVEIQKLQ--VK 1083 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~-----~~~~G~I~idG~di~~i~--~~ 1083 (1236)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGDK---HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCCc---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 5789999999753 5899999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcceEEEcCCCCCChhhHHHHHHHHhhh---------chHHHh-hhh-chhhhhcCC--CCCCChhHHHHHHHHHHHc
Q 040099 1084 WLRQQMGVVSQEPVLFSDTIRANIAEMANA---------NGFISG-LQE-GYDTLVGER--GVQLSGGQKQRVAIARAIV 1150 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~---------~~~i~~-lp~-Gldt~vge~--G~~LSGGQrQRlaLARALl 1150 (1236)
.+|++++|+||++.+|..|++||+.-.... .+.+.. +.. |++...... +.+||||||||++|||||+
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~ 157 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARALA 157 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHHHh
Confidence 788999999999999988999998521110 111111 111 444444444 5899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 040099 1151 KEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1151 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 158 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 158 NEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999998656899999999999865 999999999999999998764
No 204
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6e-42 Score=375.56 Aligned_cols=216 Identities=29% Similarity=0.488 Sum_probs=180.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH-hcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI-REKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 463 (1236)
|+++||+++|++ +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 478999999963 469999999999999999999999999999999999999999999999999987776544 6779
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
+|++|++.+|.. |++||+.++.......+..+. +.+.+..++ +++......+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999886 999999986432211111111 112222221 2333445666789999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999999875 47899999999998765 9999999999999999887764
No 205
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.2e-41 Score=372.61 Aligned_cols=205 Identities=43% Similarity=0.741 Sum_probs=185.1
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcc
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQ 1088 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~ 1088 (1236)
|+++++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999743 2458999999999999999999999999999999999999999999999999988887788899
Q ss_pred eEEEcCCCCCChhhHHHHHH---------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1089 MGVVSQEPVLFSDTIRANIA---------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1089 i~~V~Qdp~LF~gTIreNL~---------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
++|++|+|.+|..|++||+. +..++.+.+..+|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999984 122334455667778888888888899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~G 1214 (1236)
++|||||||++||+.+...+.+.|++..+++|+|++||+++.++.||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988889999999999998765
No 206
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=384.04 Aligned_cols=217 Identities=32% Similarity=0.522 Sum_probs=187.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-|+++||+++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743234699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEccCCC--CCchhHHHHHhcCCC--CCCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEPV--LLSSSIRDNIAYGKT--HATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~~--l~~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+|++|++. ++..|+.|||.++.. ..+.+ ++.++++.+++.++..+ ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 99999983 667899999987532 22332 34455555565554433 4468999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|++++++..
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998854 7899999999999988999999999999999999998764
No 207
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=385.08 Aligned_cols=215 Identities=27% Similarity=0.513 Sum_probs=184.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecC--CCCHHHHhc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLK--EFQLKWIRE 461 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~ 461 (1236)
-|+++|++|+|++ ++++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999962 346999999999999999999999999999999999999999999999999984 334566888
Q ss_pred ceEEEccCC--CCCchhHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 462 KIGLVSQEP--VLLSSSIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 462 ~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
.|+|++|++ .+|+.|++||+.++.. ..+. +++.++++..++.+ .....+.+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHH
Confidence 999999998 5788899999987532 1222 23444444444433 344556799999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998854 789999999999987 599999999999999999998876
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 4
No 208
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=375.37 Aligned_cols=210 Identities=27% Similarity=0.465 Sum_probs=178.0
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH---H
Q 040099 384 DIELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW---I 459 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 459 (1236)
-++++||+|+|+++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997422 146999999999999999999999999999999999999999999999999998877543 3
Q ss_pred h-cceEEEccCCCCCch-hHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 460 R-EKIGLVSQEPVLLSS-SIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 460 r-~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
| +.++|++|++.+|+. |++||+.++.. .... +++.++++.. |++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV-----------GLEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHH
Confidence 3 679999999998875 99999987421 1122 2233333333 45555556667899999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhhcCeEEEEECCEEEEEeC
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~ 604 (1236)
++||||++.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999998889999999999998775
No 209
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6e-42 Score=370.42 Aligned_cols=199 Identities=28% Similarity=0.523 Sum_probs=171.8
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEE
Q 040099 386 ELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGL 465 (1236)
Q Consensus 386 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 465 (1236)
+++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999631 469999999999999999999999999999999999999999999999998754 456778999
Q ss_pred EccCC--CCCchhHHHHHhcCCCCC--CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 466 VSQEP--VLLSSSIRDNIAYGKTHA--TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 466 v~Q~~--~l~~~ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
++|++ .++..|++||+.++.+.. ..+++.++++..++.++..+.| ..||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99997 467789999999864322 2345666777776655544443 48999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEE
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIV 600 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~ 600 (1236)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 57899999999999875 9999999999975
No 210
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=378.21 Aligned_cols=218 Identities=36% Similarity=0.570 Sum_probs=183.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++||+++|++. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999631 46999999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEccCCCCCc-hhHHHHHhcCCCC--CCHHHHHHHHHHhccHHHHHhCCCCccc--cccCCCCCCChHHHHHHHHHHHhc
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKTH--ATKEEIQAAAEAANASHFIKNLPQGLDT--NVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
|++|++.+|. .|++||+.++... .+.++.. ..+.+.+..+ |++. ...+.+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIR-----ERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999886 5999999875321 1111111 1122333433 4443 455667899999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998853 7899999999998754 999999999999999999888654
No 211
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=378.98 Aligned_cols=219 Identities=33% Similarity=0.516 Sum_probs=186.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCCCHHH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEFQLKW 458 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~ 458 (1236)
.++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 4699999999999999999999999999999999999974 7999999999998877778
Q ss_pred HhcceEEEccCCCCC-chhHHHHHhcCCCC----CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 459 IREKIGLVSQEPVLL-SSSIRDNIAYGKTH----AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 459 ~r~~i~~v~Q~~~l~-~~ti~~ni~~g~~~----~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
+|+.|+|++|++.+| ..|++||+.++... .. .+++.++++..++.+.+ +........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-------KDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCCcccCCHHHH
Confidence 889999999999765 56999999875321 11 13344555555543322 1233455678999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999986 5999999999999999999998
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
...+
T Consensus 233 ~~~~ 236 (250)
T PRK14247 233 FTNP 236 (250)
T ss_pred HcCC
Confidence 7653
No 212
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=383.17 Aligned_cols=211 Identities=28% Similarity=0.459 Sum_probs=184.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-++++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38899999999742223599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCCC--CCChhhHHHHHHHHh---h---------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1090 GVVSQEP--VLFSDTIRANIAEMA---N---------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1090 ~~V~Qdp--~LF~gTIreNL~~~a---~---------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
+||+|+| .++..||+|||.-.. + +.+.++.+ |++........+||||||||++|||||+++|++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~l 161 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVAMRPKI 161 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 9999998 466779999995111 1 11112211 566566777789999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 162 LlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 162 IILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999998753 7899999999999988999999999999999999998765
No 213
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.9e-42 Score=336.92 Aligned_cols=204 Identities=34% Similarity=0.508 Sum_probs=171.7
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|.+++|.|+|..-| =.++++|++||+|||+||||||||||++++.||..|.+|+|+|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56789999997543 367999999999999999999999999999999999999999999999887764 46799
Q ss_pred EEcCCCCCChh-hHHHHHH------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFSD-TIRANIA------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
+++||..||.- ||++|+. +.-.+.+... .-|+......-...||||||||+||||+|+|+-|||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~--~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilL 152 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAA--QVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILL 152 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHH--HhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEE
Confidence 99999999975 9999984 1100111100 0123322333345799999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1158 LDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
||||.|+|||.-..++...+.+.+ ++.|+++|||.++.++. +|+++++++|||+++|.-+++++.+
T Consensus 153 LDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 153 LDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred ecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 999999999999999999998876 46799999999999866 9999999999999999999999863
No 214
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=380.51 Aligned_cols=218 Identities=31% Similarity=0.480 Sum_probs=184.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecC--CCCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLK--EFQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~--~~~~ 456 (1236)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 4699999999999999999999999999999999999987 4999999999986 4455
Q ss_pred HHHhcceEEEccCCCCCch-hHHHHHhcCCC--C--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChH
Q 040099 457 KWIREKIGLVSQEPVLLSS-SIRDNIAYGKT--H--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGG 527 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 527 (1236)
..+|++++|++|++.+|.. |++||+.++.. . ... +++.++++..++.+++ .........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-------KDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-------hhhhccChhhCCHH
Confidence 5678899999999999975 99999987531 1 112 2344444444443222 12345567789999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcc
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~ 606 (1236)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777999999999999865 9999999999999999999
Q ss_pred ccccc
Q 040099 607 ELLEN 611 (1236)
Q Consensus 607 ~l~~~ 611 (1236)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 98754
No 215
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.8e-41 Score=371.87 Aligned_cols=207 Identities=27% Similarity=0.414 Sum_probs=179.7
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH-hcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL-RQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l-R~~i 1089 (1236)
|+++||+++|+.. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGKS---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCCe---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 5789999999743 58999999999999999999999999999999999999999999999999988776554 6789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhh----------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMAN----------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLL 1158 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~----------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlL 1158 (1236)
+|+||++.+|.+ |++||+..... +.++++.++ +++.........||||||||++|||||+++|++|||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llll 156 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLL 156 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999986 99999952111 122233221 345555677788999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1159 DEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1159 DEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 DEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 157 DEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999875 47899999999999865 99999999999999999988764
No 216
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.5e-42 Score=340.00 Aligned_cols=204 Identities=34% Similarity=0.548 Sum_probs=171.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC---hHHHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ---VKWLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~---~~~lR~ 1087 (1236)
|+|+||+.+|+.. +++|+||||+|++||.+-|+|||||||||++++|++...|++|+|+++|.|++.+. .-.||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999975 46999999999999999999999999999999999999999999999999998775 456899
Q ss_pred ceEEEcCCCCCCh-hhHHHHHH---HHhhhc--hHHHhhhh-----chhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1088 QMGVVSQEPVLFS-DTIRANIA---EMANAN--GFISGLQE-----GYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~-gTIreNL~---~~a~~~--~~i~~lp~-----Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+||+|+||..|.. -|+.||++ +..+.. +.=...++ ||......-...|||||+||+|||||++.+|++|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~vL 159 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPAVL 159 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCCeE
Confidence 9999999998775 59999985 111110 00001111 3333333445789999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhhc-CEEEEEeCCEEEEecCh
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKNA-HLIAVVSQGMIVEKGSH 1216 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~a-D~I~Vl~~G~Ive~Gt~ 1216 (1236)
|-||||-|||+++...|++.+.+.. .|.||++.||+.+.+..+ -|++.+++|+++....+
T Consensus 160 lADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 160 LADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred eecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 9999999999999999999998864 578999999999999875 67999999999987654
No 217
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=397.37 Aligned_cols=206 Identities=36% Similarity=0.547 Sum_probs=176.0
Q ss_pred ccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH----hcceEEEccCCCCCc-h
Q 040099 401 QILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI----REKIGLVSQEPVLLS-S 475 (1236)
Q Consensus 401 ~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l~~-~ 475 (1236)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.+.+...+ +++++||+|++.+|+ .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999988776543 457999999999986 4
Q ss_pred hHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeC
Q 040099 476 SIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDE 549 (1236)
Q Consensus 476 ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE 549 (1236)
|++||+.++.. ... .+++.++++..++.++..+ ...+||||||||++|||||+.+|++|||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~-----------~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS-----------YPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhc-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999998632 112 2344555555555554444 445899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccccchhh
Q 040099 550 ATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYGAYN 617 (1236)
Q Consensus 550 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~ 617 (1236)
|||+||+.+...+++.|.++. .++|+|++||+++.+.. ||+|++|++|++++.|++++++.++...|.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v 261 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYV 261 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHH
Confidence 999999999999999999874 37899999999999864 999999999999999999999876544443
No 218
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.2e-42 Score=372.94 Aligned_cols=208 Identities=38% Similarity=0.571 Sum_probs=172.3
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH----HH
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK----WI 459 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~----~~ 459 (1236)
|+++||+++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996321 14699999999999999999999999999999999999999999999999998876643 24
Q ss_pred hcceEEEccCCCCCch-hHHHHHhcCCCC--CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 460 REKIGLVSQEPVLLSS-SIRDNIAYGKTH--ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
+++++|++|++.+|.. |++||+.++... ...++.. ..+.+.+..+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERR-----ERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHH-----HHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5789999999999876 999999986421 1111111 1122333333 4554455566799999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEE
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKI 599 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i 599 (1236)
||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998864 7899999999999888999999999974
No 219
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=376.15 Aligned_cols=211 Identities=30% Similarity=0.479 Sum_probs=183.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC---CCCcEEEECCeecccCChHHHh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD---PSSGHITLDGVEIQKLQVKWLR 1086 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~---~~~G~I~idG~di~~i~~~~lR 1086 (1236)
.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|++||.++.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999974 358999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cceEEEcCCCCCChhhHHHHHHHHhhhc----------hHHHhhhh--ch----hhhhcCCCCCCChhHHHHHHHHHHHc
Q 040099 1087 QQMGVVSQEPVLFSDTIRANIAEMANAN----------GFISGLQE--GY----DTLVGERGVQLSGGQKQRVAIARAIV 1150 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~gTIreNL~~~a~~~----------~~i~~lp~--Gl----dt~vge~G~~LSGGQrQRlaLARALl 1150 (1236)
+.++|+||+|.+|+.|++||+.-....+ +.+..+-+ |+ .....+.+.+||||||||++|||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~ 158 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALA 158 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999999985211110 11111111 33 23456778899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1151 KEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1151 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++...+
T Consensus 159 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 159 IKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999998877899999999999886 59999999999999999999998653
No 220
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-41 Score=369.58 Aligned_cols=203 Identities=28% Similarity=0.495 Sum_probs=175.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++|+|++ .++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999963 46999999999999 99999999999999999999999999999999999987766 66788999
Q ss_pred EEccCCCCCch-hHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|.. |++||+.+... ..+ .+++.++++..++.++.+ ....+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHHHH
Confidence 99999999876 99999987421 111 234555566666554433 3345899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
|+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999865 9999999999998765
No 221
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.9e-41 Score=370.46 Aligned_cols=207 Identities=25% Similarity=0.479 Sum_probs=175.1
Q ss_pred EEEEeEEEECCCCCC-CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 385 IELKDVNFSYPARPD-EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
|+++||+++|++... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974211 169999999999999999999999999999999999999999999999999875 345678899
Q ss_pred EEEccCCCCCch-hHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
+|++|++.+|.. |++||+.+... .... +++.++++.. |++......+.+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRL-----------GMEELLDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCHHHHhhhhhhcCHHHHHHHHHHH
Confidence 999999999885 99999986421 1122 2333344444 4444455566789999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
|++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999885 47899999999998865 9999999999998754
No 222
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.6e-41 Score=365.17 Aligned_cols=200 Identities=37% Similarity=0.611 Sum_probs=181.3
Q ss_pred EEEEeEEEECCCCCC--CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 385 IELKDVNFSYPARPD--EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
++++||+++|++..+ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999964211 3699999999999999999999999999999999999999999999998 6
Q ss_pred eEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 463 IGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 463 i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
|+|++|+|.+|+.|++||+.++.. ..+++..++++.+++.+++..+|.|+++.+++++.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999754 3456677888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHH-HHHHHc-cCceEEEEecCchhHhhcCeEEEEECCE
Q 040099 543 RILLLDEATSALDSESGRMVQE-ALDRVM-INRTTVIVSHRLSLIRNANIIAVIQQGK 598 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~-~l~~~~-~~~t~i~itH~~~~~~~ad~i~vl~~G~ 598 (1236)
+++||||||++||+++.+.+.+ .++++. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999998887 456553 4689999999999998899999999985
No 223
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=383.28 Aligned_cols=213 Identities=30% Similarity=0.525 Sum_probs=182.0
Q ss_pred cEEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccC----ChH
Q 040099 1010 EVQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKL----QVK 1083 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i----~~~ 1083 (1236)
.|+++||+++|++.+ ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 13699999999999999999999999999999999999999999999999999653 346
Q ss_pred HHhcceEEEcCCC--CCChhhHHHHHHHHh---h-----hchHHHhh--hhchhh-hhcCCCCCCChhHHHHHHHHHHHc
Q 040099 1084 WLRQQMGVVSQEP--VLFSDTIRANIAEMA---N-----ANGFISGL--QEGYDT-LVGERGVQLSGGQKQRVAIARAIV 1150 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp--~LF~gTIreNL~~~a---~-----~~~~i~~l--p~Gldt-~vge~G~~LSGGQrQRlaLARALl 1150 (1236)
.+|++|+||||+| .+|..|++|||.-.. + ..+.+..+ .-|+++ .....+.+||||||||++|||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~ 161 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILA 161 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 7899999999998 688899999995110 1 11112211 126764 455678899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1151 KEPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1151 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
.+|+||||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|+|++.|+++++.++
T Consensus 162 ~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 162 MNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred hCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999874 3789999999999985 5999999999999999999998774
No 224
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=395.32 Aligned_cols=217 Identities=32% Similarity=0.525 Sum_probs=185.7
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++.+.+. .+++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 469999999999999999999999999999999999999999999999999987654 4678
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
||||+|++.+|+. ||+|||.|+.. ..+. +++.++++..++.++. .....+||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHH
Confidence 9999999999975 99999998743 1222 2344455555554443 444458999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLENP 612 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~~ 612 (1236)
|||+.+|++||||||||+||+.+...+.+.|+++. .+.|+|+|||+++.+. .||+|++|++|++++.|+++++..++
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999998888774 3789999999999875 59999999999999999999998775
Q ss_pred cch
Q 040099 613 YGA 615 (1236)
Q Consensus 613 ~~~ 615 (1236)
...
T Consensus 242 ~~~ 244 (377)
T PRK11607 242 TTR 244 (377)
T ss_pred ccH
Confidence 433
No 225
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-41 Score=370.83 Aligned_cols=209 Identities=24% Similarity=0.430 Sum_probs=177.8
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999988653 356678899
Q ss_pred EEccCCCCCch-hHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.++.. |++||+.++.. ... ++++.++++..++.++.. ....+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999988875 99999987421 111 234455555555554433 3345899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999988753 6899999999999865 999999999999999887664
No 226
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.8e-41 Score=375.34 Aligned_cols=207 Identities=28% Similarity=0.518 Sum_probs=180.8
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH-hcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL-RQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l-R~~i 1089 (1236)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999974 358999999999999999999999999999999999999999999999999988776554 5789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhh----------------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHH
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMAN----------------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~----------------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLA 1146 (1236)
+|+||++.+|.+ |++||+.-... +.++++.+ |++.........||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999987 99999852111 11222222 565566677789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||+++|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999999875 57899999999999966 999999999999999999998754
No 227
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.5e-41 Score=373.34 Aligned_cols=205 Identities=54% Similarity=0.837 Sum_probs=185.9
Q ss_pred CccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH
Q 040099 1006 NVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1006 ~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l 1085 (1236)
...+.++++|++++|+++...++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 35678999999999975423469999999999999999999999999999999999999999999999999988888888
Q ss_pred hcceEEEcCCCCCChhhHHHHHHH---------------HhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHc
Q 040099 1086 RQQMGVVSQEPVLFSDTIRANIAE---------------MANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIV 1150 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~gTIreNL~~---------------~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALl 1150 (1236)
|++++|++|+|.+|++|++||+.- ...+.+++..+|.|+++.+.+...+||||||||++|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 899999999999999999999951 01234566777778998899999999999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEE
Q 040099 1151 KEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMI 1210 (1236)
Q Consensus 1151 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~I 1210 (1236)
++|++|||||||++||+++...+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999998777899999999999988999999999974
No 228
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2e-41 Score=378.33 Aligned_cols=219 Identities=32% Similarity=0.537 Sum_probs=182.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC---------
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ--------- 455 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------- 455 (1236)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 478999999963 46999999999999999999999999999999999999999999999999986543
Q ss_pred ----HHHHhcceEEEccCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChH
Q 040099 456 ----LKWIREKIGLVSQEPVLLS-SSIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGG 527 (1236)
Q Consensus 456 ----~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 527 (1236)
...+|+.++|++|++.+|. .|+.||+.++.. ....++..+ .+.+.+..+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2456889999999998885 699999987521 112221111 112333333 4444455566789999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeC
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~ 604 (1236)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 789999999999985 499999999999999999
Q ss_pred ccccccccc
Q 040099 605 HSELLENPY 613 (1236)
Q Consensus 605 ~~~l~~~~~ 613 (1236)
++++...+.
T Consensus 231 ~~~~~~~~~ 239 (252)
T TIGR03005 231 PDEIFRQPK 239 (252)
T ss_pred HHHHhcCCC
Confidence 999876543
No 229
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-41 Score=378.72 Aligned_cols=220 Identities=31% Similarity=0.493 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD--P---QAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 456 (1236)
-|+++|++|.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 469999999999999999999999999999999999997 3 69999999999863 345
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC---CCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH---ATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+|+.++|++|++.+|+.|++||+.++... ..++ ++.++++..++.+++ .+.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHH
Confidence 5678899999999999989999999876321 1222 233344444443322 2334566778999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred ccccc
Q 040099 609 LENPY 613 (1236)
Q Consensus 609 ~~~~~ 613 (1236)
..++.
T Consensus 242 ~~~~~ 246 (259)
T PRK14274 242 FSNPD 246 (259)
T ss_pred hhCCC
Confidence 76533
No 230
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=382.33 Aligned_cols=212 Identities=30% Similarity=0.506 Sum_probs=181.3
Q ss_pred EEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC--hHHHh
Q 040099 1011 VQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ--VKWLR 1086 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~--~~~lR 1086 (1236)
|+++||+++|+... ..++|+||||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 136999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEcCCC--CCChhhHHHHHHHHh---h-----hchHHHh-hhh-chh--hhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1087 QQMGVVSQEP--VLFSDTIRANIAEMA---N-----ANGFISG-LQE-GYD--TLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1087 ~~i~~V~Qdp--~LF~gTIreNL~~~a---~-----~~~~i~~-lp~-Gld--t~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
++++||||+| .+|+.|++||+.-.. + ..+.+.. +.. |++ +........||||||||++|||||+.+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~ 162 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAME 162 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999999998 578899999995211 1 1111111 111 554 456677889999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||||++|++|++++.|+++++++.
T Consensus 163 P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 163 PKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred CCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999998753 789999999999985 5999999999999999999998763
No 231
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-42 Score=364.09 Aligned_cols=224 Identities=36% Similarity=0.566 Sum_probs=196.6
Q ss_pred cEEEEeEEEECCCCCC---------------------CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCc
Q 040099 384 DIELKDVNFSYPARPD---------------------EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAG 442 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~---------------------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 442 (1236)
.|+++||++-|..++. ..-++|+||+|+.||+..|.|-||||||||++++.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5889999988863211 1248999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCCHHHHh----cceEEEccCCCCCc-hhHHHHHhcCCCC--CC----HHHHHHHHHHhccHHHHHhCCC
Q 040099 443 EVLIDGVNLKEFQLKWIR----EKIGLVSQEPVLLS-SSIRDNIAYGKTH--AT----KEEIQAAAEAANASHFIKNLPQ 511 (1236)
Q Consensus 443 ~i~~~g~~~~~~~~~~~r----~~i~~v~Q~~~l~~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~ 511 (1236)
+|+++|.|+..++.++|| +++++|+|+.-|++ .||.||..||.+- .+ ++...++++.++++.|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999877653 57999999999886 5999999999642 12 3446677888888888888875
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhH-hhc
Q 040099 512 GLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLI-RNA 588 (1236)
Q Consensus 512 g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~-~~a 588 (1236)
+||||+|||+.|||||..+|+||++|||+|||||--+..+++-|.++.+ +||+++|||+++.. +-.
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 8999999999999999999999999999999999999999999988754 79999999999986 559
Q ss_pred CeEEEEECCEEEEEeCcccccccccchhhh
Q 040099 589 NIIAVIQQGKIVEKGTHSELLENPYGAYNR 618 (1236)
Q Consensus 589 d~i~vl~~G~i~~~g~~~~l~~~~~~~y~~ 618 (1236)
|||..|++|+|+..||++|++.+|...|-.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~ 262 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVR 262 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHH
Confidence 999999999999999999999988766644
No 232
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.4e-41 Score=375.15 Aligned_cols=216 Identities=25% Similarity=0.458 Sum_probs=183.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 463 (1236)
|+++||+++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 46999999999999999999999999999999999999999999999999988776554 35679
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCC--CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTH--ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIK 540 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~ 540 (1236)
+|++|++.+|+. |++||+.++.+. ...++..+ .+++.+..+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999886 999999875321 12222111 123444444 66666677778999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 541 DPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 541 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 47899999999987765 99999999999999999888764
No 233
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.1e-41 Score=381.11 Aligned_cols=222 Identities=27% Similarity=0.452 Sum_probs=184.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH---HHh
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK---WIR 460 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 460 (1236)
-|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 4699999999999999999999999999999999999999999999999998766543 357
Q ss_pred cceEEEccCCCCCch-hHHHHHhcCCC---CCCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 461 EKIGLVSQEPVLLSS-SIRDNIAYGKT---HATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
++++|++|++.+|+. |+.||+.++.. ..+.+ ++.+.++.. |++........+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAV-----------GLRGAAKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHH
Confidence 789999999999986 99999987421 11222 222333333 343334445568999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999998865 9999999999999999999987
Q ss_pred ccccchhhhh
Q 040099 610 ENPYGAYNRL 619 (1236)
Q Consensus 610 ~~~~~~y~~~ 619 (1236)
+++...+..+
T Consensus 233 ~~~~~~~~~~ 242 (269)
T PRK11831 233 ANPDPRVRQF 242 (269)
T ss_pred cCCcHHHHHH
Confidence 6533333433
No 234
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.1e-41 Score=391.91 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=185.1
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.++. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999974 3589999999999999999999999999999999999999999999999999887764 6789
Q ss_pred EEEcCCCCCCh-hhHHHHHHHH------------hhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFS-DTIRANIAEM------------ANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~-gTIreNL~~~------------a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+||+|++.+|+ .|++||+.-. ..+.+.++.+ |++........+||||||||+||||||+++|++|
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~ll 156 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALATSPGLL 156 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999996 5999999611 1122233322 5555666788899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|||||||+||+.+...+++.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|
T Consensus 157 LLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 157 LLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 99999999999999999999998754 6899999999999855 99999999999999999999998765545
No 235
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=388.00 Aligned_cols=227 Identities=30% Similarity=0.446 Sum_probs=188.2
Q ss_pred cEEEEeEEEECCCCC-------CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH
Q 040099 384 DIELKDVNFSYPARP-------DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~ 456 (1236)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999988764
Q ss_pred H---HHhcceEEEccCCC--CCc-hhHHHHHhcCC---CCCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 457 K---WIREKIGLVSQEPV--LLS-SSIRDNIAYGK---THATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 457 ~---~~r~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
. .+|++|+||+|+|. |++ .|+.+|+..+. ..... +++.++++.+++.+ ......+.+
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP----------EHYDRYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh----------HHhcCCCcc
Confidence 3 46788999999983 555 48998886421 11122 23445555554431 122345568
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEE
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIV 600 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~ 600 (1236)
||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998854 7899999999999975 9999999999999
Q ss_pred EEeCcccccccccchhhhhH
Q 040099 601 EKGTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 601 ~~g~~~~l~~~~~~~y~~~~ 620 (1236)
|.|+.+++++++...|.+..
T Consensus 235 e~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcCCCCHHHHHH
Confidence 99999999987666676643
No 236
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.6e-41 Score=375.13 Aligned_cols=214 Identities=30% Similarity=0.473 Sum_probs=183.2
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCC-----CcEEEECCeecccC--ChH
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPS-----SGHITLDGVEIQKL--QVK 1083 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~-----~G~I~idG~di~~i--~~~ 1083 (1236)
++++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|++||.++... +..
T Consensus 2 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGEK---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECCe---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 7899999999743 4899999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcceEEEcCCCCCChhhHHHHHHHHhhhc---------hHHHhh-h-hchh----hhhcCCCCCCChhHHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPVLFSDTIRANIAEMANAN---------GFISGL-Q-EGYD----TLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~---------~~i~~l-p-~Gld----t~vge~G~~LSGGQrQRlaLARA 1148 (1236)
.+|++++|+||++.+|+.|++||+.-..... +.+..+ . -|++ ........+||||||||++||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lara 158 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARA 158 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHH
Confidence 7789999999999999999999996221111 111111 0 1444 45567778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++..+...+
T Consensus 159 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 238 (247)
T TIGR00972 159 LAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNPKEKR 238 (247)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCChH
Confidence 99999999999999999999999999999988767899999999999865 99999999999999999999986544433
No 237
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=380.50 Aligned_cols=214 Identities=32% Similarity=0.565 Sum_probs=183.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC-HHHHhcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ-LKWIREKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~i 463 (1236)
++++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999963 246999999999999999999999999999999999999999999999999997765 35678899
Q ss_pred EEEccCCC--CCchhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEPV--LLSSSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+||+|+|. +++.|++|||.++... .+. +++.++++..++ +......+..||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGL-----------EKYRHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC-----------HHHhcCCcccCCHHHHHHHHHH
Confidence 99999985 5678999999886421 222 223344444444 3344455568999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998875 47899999999999988999999999999999999887654
No 238
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=390.45 Aligned_cols=213 Identities=28% Similarity=0.441 Sum_probs=183.4
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+++|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5899999999974 3589999999999999999999999999999999999999999999999999887653 5789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhh--------hchHHHhhh--hchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMAN--------ANGFISGLQ--EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLL 1158 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~--------~~~~i~~lp--~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlL 1158 (1236)
+||+|++.||.. |++||+.-... ..+.+..+- -|+..........||||||||+||||||+++|++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLL 160 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLLF 160 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 999999999975 99999962111 111111111 1454455667789999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1159 DEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1159 DEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|||||+||+.+...+++.|+++.+ ++|+|+|||+++.+.. ||+|+||++|+|++.|+|+++.+++...|
T Consensus 161 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~ 232 (351)
T PRK11432 161 DEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRF 232 (351)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchH
Confidence 999999999999999999998754 7899999999999855 99999999999999999999988765544
No 239
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-41 Score=378.45 Aligned_cols=223 Identities=32% Similarity=0.512 Sum_probs=186.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 456 (1236)
.|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 4699999999999999999999999999999999999985 899999999998643 23
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCC--CCCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
..+|+.++|++|++.+|+.|++||+.++.. ..+.+ ++.++++.+++.+++ .........+|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 456788999999999999999999987531 12222 234444444432211 22345566789999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999865 9999999999999999999987
Q ss_pred ccccchh
Q 040099 610 ENPYGAY 616 (1236)
Q Consensus 610 ~~~~~~y 616 (1236)
+++...|
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 6544433
No 240
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-41 Score=375.76 Aligned_cols=220 Identities=35% Similarity=0.554 Sum_probs=186.2
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCC--CC
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKE--FQ 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 455 (1236)
+.|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.+ .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999963 4699999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCCC--C-C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH--A-T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
...+|+.++|++|++.+|+.|++||+.++... . . ++++.++++.+++.+.+ .......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEV-------KDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------HHHHhcCCCCCCHHH
Confidence 55678899999999999989999999886321 1 1 23344445555443322 233456677999999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccc
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~ 607 (1236)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778899999999998865 99999999999999999998
Q ss_pred ccccc
Q 040099 608 LLENP 612 (1236)
Q Consensus 608 l~~~~ 612 (1236)
+..++
T Consensus 232 ~~~~~ 236 (250)
T PRK14240 232 LFTNP 236 (250)
T ss_pred HHhCC
Confidence 87553
No 241
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.1e-41 Score=367.16 Aligned_cols=203 Identities=28% Similarity=0.458 Sum_probs=176.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ..++++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999953 4699999999999999999999999999999999999999999999999988654 45677899
Q ss_pred EEccCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
||+|++.++. .|++||+.++.. ..+++++.++++..++.+... ..+..||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998875 699999987532 224556667777776655443 33458999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998875 47899999999999865 9999999999998765
No 242
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=382.50 Aligned_cols=217 Identities=28% Similarity=0.500 Sum_probs=186.7
Q ss_pred cEEEEeEEEECCCCC---CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC-HHHH
Q 040099 384 DIELKDVNFSYPARP---DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ-LKWI 459 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~---~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~ 459 (1236)
-++++|++++|++.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987643 3557
Q ss_pred hcceEEEccCCC--CCchhHHHHHhcCCCC--CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 460 REKIGLVSQEPV--LLSSSIRDNIAYGKTH--AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 460 r~~i~~v~Q~~~--l~~~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
|++++||+|+|. ++..|+.||+.++... .+ ++++.++++.+++.++..+. ..+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHA-----------PHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHH
Confidence 889999999984 6767999999986321 12 23455666666666555444 45899999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccc
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999999998853 78999999999999889999999999999999999987
Q ss_pred cc
Q 040099 610 EN 611 (1236)
Q Consensus 610 ~~ 611 (1236)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 243
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=391.04 Aligned_cols=213 Identities=27% Similarity=0.412 Sum_probs=184.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+++|+. +..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.++++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3889999999952 23589999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEcCCCCCCh-hhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFS-DTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~-gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+||+|++.+|. .|++|||.-... +.+.++.+ |++........+||||||||+||||||+++|++|
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ll 156 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVF 156 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999996 599999962111 11222221 5666666777899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccH
Q 040099 1157 LLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYT 1228 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~ 1228 (1236)
|||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++...|.
T Consensus 157 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (356)
T PRK11650 157 LFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTFV 231 (356)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHHH
Confidence 99999999999999999999998754 6899999999998864 999999999999999999999887654443
No 244
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=378.43 Aligned_cols=220 Identities=34% Similarity=0.520 Sum_probs=186.7
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--CC
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--FQ 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 455 (1236)
..|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 35999999999963 469999999999999999999999999999999999987 699999999999853 45
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCCC--CC---HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH--AT---KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
...+|++++||+|++.+|..|++||+.++... .. ++++.++++.+++.. ++++.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHHH
Confidence 66778899999999999988999999986421 11 233444455444332 2233455667789999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEEC-----------CE
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQ-----------GK 598 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~-----------G~ 598 (1236)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999998778899999999998865 999999996 67
Q ss_pred EEEEeCcccccccc
Q 040099 599 IVEKGTHSELLENP 612 (1236)
Q Consensus 599 i~~~g~~~~l~~~~ 612 (1236)
+++.|+.+++...+
T Consensus 242 ~~~~~~~~~~~~~~ 255 (269)
T PRK14259 242 LVEFNETKKIFNSP 255 (269)
T ss_pred EEEeCCHHHHHhCc
Confidence 99999999987653
No 245
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.8e-41 Score=369.65 Aligned_cols=205 Identities=30% Similarity=0.458 Sum_probs=177.3
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++||++.|+.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999742 135999999999999999999999999999999999999999999999999987643 66788999
Q ss_pred EEcCCCCCC-hhhHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLF-SDTIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF-~gTIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
||+|++.+| ..|++||+.... .+.++++.+ |++........+||||||||++||||++++|++||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 156 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLL 156 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998 579999985211 112222222 44444455567899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 040099 1158 LDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
|||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 157 LDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999998777999999999999965 999999999999999999875
No 246
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=380.90 Aligned_cols=214 Identities=30% Similarity=0.529 Sum_probs=185.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...++++++
T Consensus 4 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 789999999963 235999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEccCC--CCCchhHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 465 LVSQEP--VLLSSSIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 465 ~v~Q~~--~l~~~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
||+|++ .+|+.|+.||+.++.. ..+. +++.++++..++.+++.+ ....||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDR-----------VPHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHHHHHH
Confidence 999997 4678899999987532 1222 234555666555554444 34589999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999998753 789999999999985 5999999999999999999998764
No 247
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=356.94 Aligned_cols=191 Identities=36% Similarity=0.516 Sum_probs=163.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.+++++|+.+|+. ..||+|+||+|++||+|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4789999999985 4699999999999999999999999999999999999999999999999988543 4679
Q ss_pred EEEcCCCCCChh-hHHHHHH---H---------HhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIA---E---------MANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~---~---------~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+||+|++.||+- ||+||+. + .+.+.+.++.. |+..--+.-..+||||||||+||||||+.+|+||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lL 152 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALATRPKLL 152 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhcCCCEE
Confidence 999999999986 9999984 1 12223333221 4443444566899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeC--CEE
Q 040099 1157 LLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQ--GMI 1210 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~--G~I 1210 (1236)
+||||.+|||+.|...+|+-|.+..+ ++|+++|||+.+..-. +|||+||.+ |+|
T Consensus 153 LlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 153 LLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred EEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 99999999999999999999988753 5899999999998754 999999999 555
No 248
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=379.63 Aligned_cols=213 Identities=30% Similarity=0.504 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5899999999963 4699999999999999999999999999999999999999999999999999887778888899
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCC----------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTH----------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
+|++|++.++.. |+.||+.++... ..++++.++++.+++.+++.+. ..+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHHHH
Confidence 999999877654 999999976321 1123455666666665544443 348999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
+|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999999998853 7899999999999864 9999999999999999998876
Q ss_pred c
Q 040099 610 E 610 (1236)
Q Consensus 610 ~ 610 (1236)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 5
No 249
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.6e-41 Score=393.08 Aligned_cols=208 Identities=30% Similarity=0.453 Sum_probs=175.9
Q ss_pred CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCe----ecCCCCHHHH---h-cceEEEccCCC
Q 040099 400 EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGV----NLKEFQLKWI---R-EKIGLVSQEPV 471 (1236)
Q Consensus 400 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~----~~~~~~~~~~---r-~~i~~v~Q~~~ 471 (1236)
..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 46899999999999999999999999999999999999999999999996 5666655443 3 57999999999
Q ss_pred CCc-hhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 472 LLS-SSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 472 l~~-~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
+|+ .|++||+.++... .+. +++.++++..++.++. .....+||||||||++|||||+.+|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 6999999987421 122 2344555555554443 334458999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccccccccchhhh
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLENPYGAYNR 618 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~~~~~y~~ 618 (1236)
||||||||+||+.+...+++.|.++.+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++.++...|.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 999999999999999999999998854 789999999999975 59999999999999999999998765555544
No 250
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.1e-41 Score=374.41 Aligned_cols=216 Identities=28% Similarity=0.520 Sum_probs=184.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 46999999999999999999999999999999999999999999999999987766544 45899
Q ss_pred EEccCCCCC-chhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 465 LVSQEPVLL-SSSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 465 ~v~Q~~~l~-~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
|++|++.++ ..|++||+.++.. ....++..+ .+.+++..+ |++......+.+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999874 5799999987532 122222211 123444444 666666777789999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999885 37899999999999888999999999999999998888654
No 251
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-41 Score=379.40 Aligned_cols=216 Identities=32% Similarity=0.598 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.++++|++++|++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 35799999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEEccCC--CCCchhHHHHHhcCCCC--CCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEP--VLLSSSIRDNIAYGKTH--ATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~--~l~~~ti~~ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+||+|++ .++..|++|||.++... .+.++ +.++++..++.+++ .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHHHHHH
Confidence 9999998 35567999999986321 22222 34444445544443 444569999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 4899999999999888999999999999999998887654
No 252
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.4e-41 Score=380.00 Aligned_cols=220 Identities=30% Similarity=0.472 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCC------CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH
Q 040099 385 IELKDVNFSYPAR------PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW 458 (1236)
Q Consensus 385 i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~ 458 (1236)
|+++||+|+|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 1357999999999999999999999999999999999999999999999999998776543
Q ss_pred ---HhcceEEEccCCC--CC-chhHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChHH
Q 040099 459 ---IREKIGLVSQEPV--LL-SSSIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGGQ 528 (1236)
Q Consensus 459 ---~r~~i~~v~Q~~~--l~-~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGq 528 (1236)
+|+.|+|++|++. ++ ..|++||+.++.. ....++..+ .+.+.++.+ |++ ......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKA-----RIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 5778999999983 44 3699999975421 111111111 112333333 443 34456677999999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCc
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~ 605 (1236)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998854 7899999999999975 999999999999999999
Q ss_pred cccccc
Q 040099 606 SELLEN 611 (1236)
Q Consensus 606 ~~l~~~ 611 (1236)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 999864
No 253
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-41 Score=371.65 Aligned_cols=210 Identities=32% Similarity=0.529 Sum_probs=181.2
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH---HHh
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK---WLR 1086 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~---~lR 1086 (1236)
|+++|++++|+++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997531 12599999999999999999999999999999999999999999999999999876543 357
Q ss_pred cceEEEcCCCCCCh-hhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1087 QQMGVVSQEPVLFS-DTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~-gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
++++|+||+|.+|. .|++||+..... +.++++.+ |++........+||||||||++||||++++|
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 159 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARALANNP 159 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 89999999999997 599999852211 12222222 5555566777899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 160 ~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (233)
T cd03258 160 KVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFAN 231 (233)
T ss_pred CEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999998753 7899999999999865 999999999999999999998753
No 254
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=378.97 Aligned_cols=219 Identities=30% Similarity=0.486 Sum_probs=184.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 456 (1236)
-|+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5899999999963 469999999999999999999999999999999999865 799999999999864 334
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCCC---C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTHA---T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..++++++|++|++.+|+.|++||+.++.... . ++.+.++++..++.+. +....+..+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-------VKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-------hHHHHhcCcccCCHHHH
Confidence 56788999999999999999999998753211 1 1223444444443211 12334566779999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998765 999999999999999999988
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
..++
T Consensus 251 ~~~~ 254 (268)
T PRK14248 251 FTSP 254 (268)
T ss_pred HhCC
Confidence 7653
No 255
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4e-41 Score=364.57 Aligned_cols=204 Identities=33% Similarity=0.594 Sum_probs=179.9
Q ss_pred cccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhc
Q 040099 1008 MGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQ 1087 (1236)
Q Consensus 1008 ~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~ 1087 (1236)
.+.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 3579999999999753 235899999999999999999999999999999999999999999999999999888888999
Q ss_pred ceEEEcCCCCCChhhHHHHHHHHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 040099 1088 QMGVVSQEPVLFSDTIRANIAEMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDI 1167 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~gTIreNL~~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~ 1167 (1236)
+++||||+|.+|++|++||+....... ...+.+-++ ++.....|||||+||++||||++++|++|||||||++||+
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~~~--~~~~~~~l~--~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~ 158 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDEYS--DEEIYGALR--VSEGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDY 158 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCCCC--HHHHHHHhh--ccCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCH
Confidence 999999999999999999995211110 011112222 5677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecCh
Q 040099 1168 ESERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSH 1216 (1236)
Q Consensus 1168 ~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~ 1216 (1236)
.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 159 ~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 159 ATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999998778999999999999988999999999999998875
No 256
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.3e-41 Score=369.34 Aligned_cols=209 Identities=30% Similarity=0.546 Sum_probs=173.0
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH---Hh
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW---IR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r 460 (1236)
|+++||+++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996321 246999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -cceEEEccCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 461 -EKIGLVSQEPVLLS-SSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 461 -~~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
++++||+|++.+|+ .|++||+.++.. ....++..+. +.+++..+ |++.........||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKER-----AYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999886 599999987421 1121111111 12233333 4554555566789999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEE
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIV 600 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~ 600 (1236)
||+++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999998853 78999999999999889999999999985
No 257
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-41 Score=381.09 Aligned_cols=212 Identities=27% Similarity=0.481 Sum_probs=179.8
Q ss_pred EEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc----CChHH
Q 040099 1011 VQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK----LQVKW 1084 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~----i~~~~ 1084 (1236)
|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997421 1259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEcCCC--CCChhhHHHHHHHHh---h-----hchHHHhhh--hchh-hhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1085 LRQQMGVVSQEP--VLFSDTIRANIAEMA---N-----ANGFISGLQ--EGYD-TLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1085 lR~~i~~V~Qdp--~LF~gTIreNL~~~a---~-----~~~~i~~lp--~Gld-t~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
+|++++||+|+| .+|..|+.||+.-.. + ....+..+- -|++ ........+||||||||++|||||+.
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~ 161 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAM 161 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHh
Confidence 899999999998 789999999995211 1 111111111 1443 24467778999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+|+||||||||++||+.+...+.+.|+++. +++|+|+|||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 162 ~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 162 EPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred CCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999998865 4789999999999885 5999999999999999999998764
No 258
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-41 Score=377.38 Aligned_cols=223 Identities=32% Similarity=0.507 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 456 (1236)
.|+++|++|+|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 469999999999999999999999999999999999997 489999999999854 344
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH--A-TK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+++.++|++|++.+|+.|++||+.++... . .. +++.++++..+++.. ........+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKE-------TKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcc-------hHHHhccChhhCCHHHH
Confidence 5678889999999999999999999875321 1 11 233444444444211 11223456679999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++||||++++|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999998
Q ss_pred cccccchh
Q 040099 609 LENPYGAY 616 (1236)
Q Consensus 609 ~~~~~~~y 616 (1236)
...+...|
T Consensus 234 ~~~~~~~~ 241 (251)
T PRK14251 234 FIAPKKQI 241 (251)
T ss_pred HhCCCCHH
Confidence 76533333
No 259
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.8e-41 Score=356.41 Aligned_cols=178 Identities=39% Similarity=0.662 Sum_probs=166.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++|++++|+.+ ..++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999754 23599999999999999999999999999999999999999999999999998776 667889999
Q ss_pred EEcCCCCCChhhHHHHHHHHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHH
Q 040099 1091 VVSQEPVLFSDTIRANIAEMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESE 1170 (1236)
Q Consensus 1091 ~V~Qdp~LF~gTIreNL~~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te 1170 (1236)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++|||||||++||+.+.
T Consensus 79 ~~~q~~~~~~~tv~~~i------------------------~~~LS~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~ 134 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL------------------------GRRFSGGERQRLALARILLQDAPIVLLDEPTVGLDPITE 134 (178)
T ss_pred EEccCCeeecccHHHhh------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHH
Confidence 99999999999999998 467999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEec
Q 040099 1171 RVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1171 ~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~G 1214 (1236)
+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 135 ~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 135 RQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred HHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999887789999999999999889999999999998865
No 260
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-41 Score=370.61 Aligned_cols=206 Identities=34% Similarity=0.496 Sum_probs=173.2
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996311 1469999999999999999999999999999999999999999999999998863 36789
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
+||+|++.+|. .|++||+.++.. ... .+++.++++..++.++ ......+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGF-----------ENAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 99999999887 599999987532 111 2334444555544443 34444689999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEE--CCEEEEEeCcc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQ--QGKIVEKGTHS 606 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~--~G~i~~~g~~~ 606 (1236)
||+.+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||++++|+ +|+++++++.+
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 9999999999999999999999999999999874 37899999999998765 99999999 79999988753
No 261
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-41 Score=378.85 Aligned_cols=220 Identities=32% Similarity=0.528 Sum_probs=187.8
Q ss_pred CCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCC--C
Q 040099 382 RGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKE--F 454 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~ 454 (1236)
.+.|+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 4699999999999999999999999999999999999984 89999999999864 3
Q ss_pred CHHHHhcceEEEccCCCCCchhHHHHHhcCCC--CC-C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChH
Q 040099 455 QLKWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HA-T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGG 527 (1236)
Q Consensus 455 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 527 (1236)
+..++|+.++|++|++.+|+.|++||+.++.. .. . ++++.++++.+++.+++ .+..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-------KDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-------HHHhhCCcccCCHH
Confidence 45577889999999999998899999987532 11 1 12345555555544332 23456677899999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcc
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~ 606 (1236)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778899999999999864 9999999999999999999
Q ss_pred ccccc
Q 040099 607 ELLEN 611 (1236)
Q Consensus 607 ~l~~~ 611 (1236)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 88754
No 262
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.9e-41 Score=386.77 Aligned_cols=213 Identities=25% Similarity=0.477 Sum_probs=180.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999962 46999999999999999999999999999999999999999999999999987654 3578899
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCC--CCCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKT--HATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
|||||++.++. .|++||+.+... ..+..+ +.++++..+ +.........+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAK-----------LENKADAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CchHhcCchhhCCHHHHHHHHHHH
Confidence 99999999886 599999986321 122222 223333332 222223334589999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||+.+|++|||||||++||+.+...+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999985 47899999999999976 999999999999999999998654
No 263
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-41 Score=373.53 Aligned_cols=208 Identities=32% Similarity=0.548 Sum_probs=181.7
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999752 35899999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCCCCCCh-hhHHHHHHHHh------------hhchHHHhhhhchhh--hhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFS-DTIRANIAEMA------------NANGFISGLQEGYDT--LVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~-gTIreNL~~~a------------~~~~~i~~lp~Gldt--~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
|+||+|.+|. .|++||+.... .+.+.++.+ |++. .....+.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 156 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALAADPPL 156 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999996 69999985211 112222322 4443 45667789999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 157 lllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 157 LLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999998753 7899999999998755 999999999999999999999765
No 264
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-41 Score=377.75 Aligned_cols=220 Identities=29% Similarity=0.479 Sum_probs=188.0
Q ss_pred CCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--C
Q 040099 382 RGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--F 454 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~ 454 (1236)
...|+++|++|+|++ +++|+|+||++++||++||+||||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 346999999999953 569999999999999999999999999999999999997 589999999999864 3
Q ss_pred CHHHHhcceEEEccCCCCCchhHHHHHhcCCCC---CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChH
Q 040099 455 QLKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH---AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGG 527 (1236)
Q Consensus 455 ~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 527 (1236)
+...+|+.|+||+|++.+|..|++||+.++... .. ++++.++++..++.+++ ++..+..+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHH
Confidence 455678899999999999989999999986321 11 12344455555554333 23456777899999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcc
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~ 606 (1236)
||||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999998854 9999999999999999999
Q ss_pred ccccc
Q 040099 607 ELLEN 611 (1236)
Q Consensus 607 ~l~~~ 611 (1236)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 98764
No 265
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=386.88 Aligned_cols=228 Identities=24% Similarity=0.373 Sum_probs=185.2
Q ss_pred EEEEeEEEECCCCCC-CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC----CCCcEEEECCeecCCCCHHHH
Q 040099 385 IELKDVNFSYPARPD-EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD----PQAGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~~ 459 (1236)
|+++|++++|+.+.. ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.++|+++.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999974321 369999999999999999999999999999999999998 489999999999988877655
Q ss_pred h----cceEEEccCCC--CCc-hhHHHHHh----cCCCC---CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 460 R----EKIGLVSQEPV--LLS-SSIRDNIA----YGKTH---ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 460 r----~~i~~v~Q~~~--l~~-~ti~~ni~----~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
+ +.|+||+|++. +.+ .|+.+++. ..... ...+++.++++..++.+. ....+..+.+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP--------ASRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhCCchhCC
Confidence 4 36999999984 443 25655543 22111 112334455555554321 123456677999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEE
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEK 602 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~ 602 (1236)
||||||++|||||+.+|++||+|||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+. .||+|+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999853 789999999999985 5999999999999999
Q ss_pred eCcccccccccchhhhhH
Q 040099 603 GTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 603 g~~~~l~~~~~~~y~~~~ 620 (1236)
|+.+++++++...|.+..
T Consensus 236 g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred CCHHHHhhCCCChHHHHH
Confidence 999999987777776543
No 266
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=379.91 Aligned_cols=216 Identities=31% Similarity=0.566 Sum_probs=187.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCC---cEEEECCeecCCCCHHHHh
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQA---GEVLIDGVNLKEFQLKWIR 460 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~~~g~~~~~~~~~~~r 460 (1236)
.|+++|++|+|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...++
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 58999999999642 2469999999999999999999999999999999999999998 8999999999877777778
Q ss_pred cceEEEccCCC--CCchhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 461 EKIGLVSQEPV--LLSSSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 461 ~~i~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
++||||+|++. +++.|+.|||.++... .+. +++.++++..++.++..+. ..+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSE-----------PANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHH
Confidence 89999999984 5678999999986322 233 2345556666655544444 468999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEEeCcccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 789999999999998899999999999999999988865
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 4
No 267
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.5e-41 Score=371.72 Aligned_cols=206 Identities=29% Similarity=0.518 Sum_probs=180.9
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999974 35899999999999999999999999999999999999999999999999998776544 46899
Q ss_pred EEcCCCCC-ChhhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVL-FSDTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~L-F~gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||++.+ +..|++||+...+. +.++++.+ |++........+||||||||++|||||+++|+|||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 155 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRPALLL 155 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999987 56799999952211 12223322 56666677788999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1158 LDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 156 lDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 156 LDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred EcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999875 37899999999999988999999999999999999999875
No 268
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-41 Score=376.27 Aligned_cols=219 Identities=31% Similarity=0.488 Sum_probs=184.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD--P---QAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~~ 456 (1236)
-++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 469999999999999999999999999999999999954 6 599999999998643 34
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCC--C-CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKT--H-AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~-~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+|+.++||+|++.+|+.|++||+.++.. . .. ++++.++++.+++.+.+ .+..+..+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHH
Confidence 567888999999999999999999987521 1 11 12333444444443222 2345566779999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999998765 999999999999999999998
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
.+.+
T Consensus 235 ~~~~ 238 (252)
T PRK14239 235 FMNP 238 (252)
T ss_pred HhCC
Confidence 7653
No 269
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3e-41 Score=389.50 Aligned_cols=200 Identities=34% Similarity=0.488 Sum_probs=176.3
Q ss_pred cccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH----hcceEEEcCCCCCChh
Q 040099 1026 IEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL----RQQMGVVSQEPVLFSD 1101 (1236)
Q Consensus 1026 ~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l----R~~i~~V~Qdp~LF~g 1101 (1236)
..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|++||.|+...+...+ |++++||+|++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 358999999999999999999999999999999999999999999999999999998887 7899999999999974
Q ss_pred -hHHHHHHHH------------hhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHH
Q 040099 1102 -TIRANIAEM------------ANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIE 1168 (1236)
Q Consensus 1102 -TIreNL~~~------------a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~ 1168 (1236)
||+||+.-. ..+.+.++. -|++...+....+||||||||++|||||+++|+|||||||||+||+.
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~--vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~ 163 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKL--VGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPL 163 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHh--cCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 999999511 111222222 26666777888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1169 SERVVQDALDQVM--VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1169 te~~I~~~L~~~~--~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
+.+.+++.+.++. .++|+|+|||+++.+. .||+|++|++|++++.|+|++++.++...|
T Consensus 164 ~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 164 IRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999998874 3789999999999874 599999999999999999999988654444
No 270
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-41 Score=374.24 Aligned_cols=216 Identities=27% Similarity=0.407 Sum_probs=181.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~--i~~ 1082 (1236)
-++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTDF---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCCc---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 58999999999743 589999999999999999999999999999999999997 48999999999853 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhh---------chHHHh------hhhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANA---------NGFISG------LQEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~---------~~~i~~------lp~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++||||++.+|+.|++||+...... .+.+.. +.+++.........+||||||||++|||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~lar 163 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIAR 163 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHH
Confidence 6788999999999999999999999621111 111111 1111122345567899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.-.
T Consensus 164 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 243 (254)
T PRK14273 164 TLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFFNPKNT 243 (254)
T ss_pred HHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCh
Confidence 999999999999999999999999999999998777899999999999865 9999999999999999999998754443
Q ss_pred cH
Q 040099 1227 YT 1228 (1236)
Q Consensus 1227 y~ 1228 (1236)
|.
T Consensus 244 ~~ 245 (254)
T PRK14273 244 KT 245 (254)
T ss_pred HH
Confidence 43
No 271
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-41 Score=373.14 Aligned_cols=205 Identities=35% Similarity=0.456 Sum_probs=177.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 46999999999999999999999999999999999999999999999998763 457789
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCC
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDP 542 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p 542 (1236)
+|++|++.+|+ .|++||+.++.....++++.++++..++.++ ....+.+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 5999999986432223455555555555433 44455689999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccc
Q 040099 543 RILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 543 ~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~ 607 (1236)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|+++++|+.+.
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 220 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDL 220 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeccccc
Confidence 9999999999999999999999998874 37899999999999864 99999999999999887653
No 272
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-41 Score=376.24 Aligned_cols=219 Identities=34% Similarity=0.535 Sum_probs=184.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcC---CCC--CCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRF---YDP--QAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~~~g~~~~~~--~~ 456 (1236)
.|+++|+++.|+. +++|+|+||+|++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 4699999999999999999999999999999999997 454 599999999998653 34
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC--C-C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH--A-T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..++++++|++|++.+|+.|++||+.++... . . ++++.++++..++.+++ ++.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHH
Confidence 5678899999999999988999999875321 1 1 12334444444443222 2345567789999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999855 999999999999999999998
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
.+++
T Consensus 233 ~~~~ 236 (250)
T PRK14245 233 FTNP 236 (250)
T ss_pred hcCC
Confidence 7653
No 273
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-41 Score=373.37 Aligned_cols=207 Identities=35% Similarity=0.540 Sum_probs=179.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC---hHHHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ---VKWLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~---~~~lR~ 1087 (1236)
++++||+++|+.+ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 4689999999741 35899999999999999999999999999999999999999999999999998776 466888
Q ss_pred ceEEEcCCCCCCh-hhHHHHHHHHh--------------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHH
Q 040099 1088 QMGVVSQEPVLFS-DTIRANIAEMA--------------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~-gTIreNL~~~a--------------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLA 1146 (1236)
.++|+||++.+|. .|++||+.... .+.+.+..+ |++......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999998887 69999995210 011112221 455556677889999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhh
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
|||+++|+||||||||++||+.+...+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELTD 234 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhhH
Confidence 99999999999999999999999999999999875 3789999999999998 599999999999999999999743
No 274
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-41 Score=389.04 Aligned_cols=229 Identities=23% Similarity=0.394 Sum_probs=188.4
Q ss_pred cEEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC---CcEEEECCeecCCCCHHHH
Q 040099 384 DIELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ---AGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~~~~~~ 459 (1236)
-++++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996322 246999999999999999999999999999999999999996 9999999999988877655
Q ss_pred h----cceEEEccCC--CCCc-hhHHHHHhcCC---CCCCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 460 R----EKIGLVSQEP--VLLS-SSIRDNIAYGK---THATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 460 r----~~i~~v~Q~~--~l~~-~ti~~ni~~g~---~~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
+ ++|+||+|++ .+++ .|+.+|+.... ...+.++ +.+.++.. .+|++. +.++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~v-------gL~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAV-------KMPEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------CCCChH-HHhcCCcccCC
Confidence 3 4799999998 4554 47777775321 1123322 22233322 233322 23567788999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEE
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEK 602 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~ 602 (1236)
||||||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998854 7899999999999875 999999999999999
Q ss_pred eCcccccccccchhhhhH
Q 040099 603 GTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 603 g~~~~l~~~~~~~y~~~~ 620 (1236)
|+++++.+++...|.+..
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999988777787643
No 275
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.1e-41 Score=373.16 Aligned_cols=217 Identities=34% Similarity=0.562 Sum_probs=183.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC--CHHHHhcc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF--QLKWIREK 462 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~--~~~~~r~~ 462 (1236)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +..+++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 4699999999999999999999999999999999999999999999999998764 34567889
Q ss_pred eEEEccCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 040099 463 IGLVSQEPVLLS-SSIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAM 538 (1236)
Q Consensus 463 i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal 538 (1236)
++|++|++.++. .|++||+.++.. ..+.++..+ .+.+.++.+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 599999987531 112222211 112334443 555555666679999999999999999
Q ss_pred cCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 539 IKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 539 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
+++|+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999998875 47899999999999865 999999999999999999888654
No 276
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.1e-41 Score=367.34 Aligned_cols=203 Identities=32% Similarity=0.530 Sum_probs=172.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999963 4699999999999999999999999999999999999999999999999998765432 46799
Q ss_pred EEccCCCCCc-hhHHHHHhcCCC--CCCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKT--HATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|. .|++||+.++.. ....+ ++.++++..++. ........+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-----------HLLDRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-----------HHHhCChhhCCHHHHHHHHHHHH
Confidence 9999999886 599999987532 11222 233444444443 33444556899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
++++|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999999998753 7899999999998875 9999999999999865
No 277
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=372.84 Aligned_cols=219 Identities=25% Similarity=0.411 Sum_probs=182.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 462 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 3899999999963 46999999999999999999999999999999999999999999999999998777543 6778
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
++|++|++.+|+. |++||+.++......++..+.+ .+.+..++ +++.........||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 9999999864322222222211 11222221 122223345678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccc
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999875 4799999999999875 5999999999999999999988653
No 278
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=8.6e-41 Score=373.11 Aligned_cols=217 Identities=34% Similarity=0.556 Sum_probs=183.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC--------H
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ--------L 456 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------~ 456 (1236)
++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999963 46999999999999999999999999999999999999999999999999986532 3
Q ss_pred HHHhcceEEEccCCCCCc-hhHHHHHhcCC---CCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 457 KWIREKIGLVSQEPVLLS-SSIRDNIAYGK---THATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
..+|++++||+|++.+|+ .|++||+.++. .....++..+. +.+.+..+ |++......+.+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 456788999999998886 69999998742 11122222111 12334444 555555667789999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998754 7899999999999865 99999999999999999999876
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 234 ~ 234 (250)
T PRK11264 234 D 234 (250)
T ss_pred C
Confidence 5
No 279
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-41 Score=375.79 Aligned_cols=212 Identities=26% Similarity=0.501 Sum_probs=184.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..++++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998877778888899
Q ss_pred EEccCCCCCch-hHHHHHhcCCCC----------CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKTH----------ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
|++|++.++.+ |+.||+.++... ...+++.++++..++.++ ....+..||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHHHHH
Confidence 99999988876 999999986321 012234455555554433 33445689999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
||||++.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999999999998875 47899999999999865 99999999999999999988865
No 280
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-41 Score=380.60 Aligned_cols=221 Identities=28% Similarity=0.541 Sum_probs=183.1
Q ss_pred cEEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC----CHH
Q 040099 384 DIELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF----QLK 457 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~ 457 (1236)
.|+++|++++|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhcceEEEccCC--CCCchhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChHHHHHH
Q 040099 458 WIREKIGLVSQEP--VLLSSSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGqkqRi 532 (1236)
..++.|+|++|+| .+|..|++|||.++.. ....++..+. +.+.+..+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEK-----ALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6678899999998 5777899999987532 2222222211 12233333 454 234556679999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999885 47899999999999865 99999999999999999998865
Q ss_pred c
Q 040099 611 N 611 (1236)
Q Consensus 611 ~ 611 (1236)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 4
No 281
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.3e-41 Score=367.45 Aligned_cols=201 Identities=32% Similarity=0.527 Sum_probs=172.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH---HHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK---WIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 461 (1236)
|+++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999952 24699999999999999999999999999999999999999999999999999876543 4678
Q ss_pred ceEEEccCCCCCc-hhHHHHHhcCCC--CC----CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 462 KIGLVSQEPVLLS-SSIRDNIAYGKT--HA----TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~-~ti~~ni~~g~~--~~----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
.++|++|++.+|. .|++||+.++.. .. .++++.++++..++.++..+. ..+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAF-----------PEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHH
Confidence 8999999999886 599999987521 11 123455666666655544443 35899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCE
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGK 598 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~ 598 (1236)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875 47899999999999876 99999999985
No 282
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-41 Score=375.70 Aligned_cols=220 Identities=31% Similarity=0.486 Sum_probs=187.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 456 (1236)
-|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 469999999999999999999999999999999999986 489999999998853 445
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCCC-----CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTHA-----TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
.+++++|+|++|++.+|+.|++||+.++.... .++++.++++.+++.+++. ...+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHH
Confidence 66788999999999999889999999864211 1233445556666554442 23456677899999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEE---------CCEEEE
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQ---------QGKIVE 601 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~---------~G~i~~ 601 (1236)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999865 99999998 899999
Q ss_pred EeCccccccccc
Q 040099 602 KGTHSELLENPY 613 (1236)
Q Consensus 602 ~g~~~~l~~~~~ 613 (1236)
.|+++++.+.+.
T Consensus 240 ~~~~~~~~~~~~ 251 (264)
T PRK14243 240 FDRTEKIFNSPQ 251 (264)
T ss_pred eCCHHHHHhCCC
Confidence 999999976543
No 283
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-41 Score=374.30 Aligned_cols=224 Identities=28% Similarity=0.490 Sum_probs=187.2
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CCcEEEECCeecCCC--C
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD--P---QAGEVLIDGVNLKEF--Q 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~ 455 (1236)
+.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 56999999999963 469999999999999999999999999999999999986 4 699999999998643 3
Q ss_pred HHHHhcceEEEccCCCCCc-hhHHHHHhcCCCC---CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChH
Q 040099 456 LKWIREKIGLVSQEPVLLS-SSIRDNIAYGKTH---ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGG 527 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 527 (1236)
...+|+.++|++|++.+|. .|++||+.++... .+. +++.++++..++.+++. ...+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVK-------DRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcCcCCHH
Confidence 4567889999999999987 5999999875211 111 23445555555443322 2234567789999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcc
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~ 606 (1236)
||||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999999778899999999999854 9999999999999999999
Q ss_pred cccccccchh
Q 040099 607 ELLENPYGAY 616 (1236)
Q Consensus 607 ~l~~~~~~~y 616 (1236)
++...+...|
T Consensus 233 ~~~~~~~~~~ 242 (252)
T PRK14256 233 KIFTTPEKKQ 242 (252)
T ss_pred HHHhCCCcHH
Confidence 9876544333
No 284
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.5e-41 Score=373.13 Aligned_cols=206 Identities=33% Similarity=0.516 Sum_probs=178.3
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh---HHHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV---KWLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~---~~lR~ 1087 (1236)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 679999999972 2359999999999999999999999999999999999999999999999999987654 44788
Q ss_pred ceEEEcCCCCCCh-hhHHHHHHHH--------------------hhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHH
Q 040099 1088 QMGVVSQEPVLFS-DTIRANIAEM--------------------ANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~-gTIreNL~~~--------------------a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLA 1146 (1236)
+++||||++.+|. .|++||+.-. ..+.+.++.+ |++........+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 9999999998886 5999999510 0111122222 555566677889999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
|||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 999999999999999999999999999999998743 7899999999999865 9999999999999999999974
No 285
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.1e-41 Score=373.07 Aligned_cols=221 Identities=24% Similarity=0.457 Sum_probs=185.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 463 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 46999999999999999999999999999999999999999999999999988776554 35579
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCCCCH--HH---HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTHATK--EE---IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~~--~~---~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
+|++|++.+|++ |++||+.++...... .. .........+.+.+..+ |++........+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 999999886321000 00 00000111223444444 56656667778999999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999975 99999999999999999988764
No 286
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-41 Score=371.83 Aligned_cols=205 Identities=33% Similarity=0.483 Sum_probs=178.1
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999975 359999999999999999999999999999999999999999999999999876653 367899
Q ss_pred EEcCCCCCCh-hhHHHHHHHHhhh----------------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1091 VVSQEPVLFS-DTIRANIAEMANA----------------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1091 ~V~Qdp~LF~-gTIreNL~~~a~~----------------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
||||+|.+|. .|++||+.-.... .+.+..+ |++........+||||||||++|||||+++|
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 155 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARALAVEP 155 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999986 5999999622111 1112211 4555566677899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 156 KVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 99999999999999999999999998753 6899999999998765 999999999999999999999765
No 287
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5.5e-41 Score=370.44 Aligned_cols=206 Identities=27% Similarity=0.475 Sum_probs=179.9
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH-Hhcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW-LRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~-lR~~i 1089 (1236)
++++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGKR---KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCCE---EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 4789999999743 5899999999999999999999999999999999999999999999999998777655 45789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+|+||++.+|.+ |++||+.-.. .+.+++..+ |++........+||||||||++||||++.+|++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 155 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATNPKFL 155 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999987 9999985211 112223322 5666667778899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 llDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 156 LLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999998875 47899999999988765 99999999999999999999865
No 288
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-41 Score=376.61 Aligned_cols=220 Identities=32% Similarity=0.532 Sum_probs=184.5
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCCCC--HH
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKEFQ--LK 457 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~~--~~ 457 (1236)
-+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999962 469999999999999999999999999999999999986 47999999999886543 33
Q ss_pred HHhcceEEEccCCCCCchhHHHHHhcCCC--CC--C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 458 WIREKIGLVSQEPVLLSSSIRDNIAYGKT--HA--T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
.+|++++|++|++.+|+.|++||+.++.. .. . ++++.++++..++.+++ .+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 56889999999999999999999987521 11 1 12334444554443321 2234566778999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999998
Q ss_pred cccccc
Q 040099 609 LENPYG 614 (1236)
Q Consensus 609 ~~~~~~ 614 (1236)
...+..
T Consensus 236 ~~~~~~ 241 (251)
T PRK14244 236 FKNPQS 241 (251)
T ss_pred hcCCCC
Confidence 766433
No 289
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=378.40 Aligned_cols=220 Identities=31% Similarity=0.555 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC----CHHH
Q 040099 385 IELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF----QLKW 458 (1236)
Q Consensus 385 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~ 458 (1236)
|+++||+|+|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 14699999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhcceEEEccCC--CCCchhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 040099 459 IREKIGLVSQEP--VLLSSSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 459 ~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGqkqRia 533 (1236)
+|+.|+|++|++ .+|+.|++||+.++.. ..+.++..+.+ .+.++.+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 6788899999987532 12333322211 1223332 443 2345666789999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999998754 7899999999998865 999999999999999999888654
No 290
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-41 Score=380.84 Aligned_cols=223 Identities=29% Similarity=0.508 Sum_probs=182.6
Q ss_pred CCcEEEEeEEEECCCCC--CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC----C-
Q 040099 382 RGDIELKDVNFSYPARP--DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE----F- 454 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~- 454 (1236)
.+.|+++|++++|+++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35799999999997432 1359999999999999999999999999999999999999999999999998852 2
Q ss_pred CHHHHhcceEEEccCC--CCCchhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChHHH
Q 040099 455 QLKWIREKIGLVSQEP--VLLSSSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGGQK 529 (1236)
Q Consensus 455 ~~~~~r~~i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGqk 529 (1236)
+...+|+.|+||+|++ .+|..|++||+.++.. ....++..+.+ .+.+..+ |+. ........+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 3456788999999998 4677899999998632 12232222211 1122222 331 234556678999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~ 606 (1236)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998753 7899999999998754 9999999999999999988
Q ss_pred ccccc
Q 040099 607 ELLEN 611 (1236)
Q Consensus 607 ~l~~~ 611 (1236)
++...
T Consensus 237 ~~~~~ 241 (289)
T PRK13645 237 EIFSN 241 (289)
T ss_pred HHhcC
Confidence 87654
No 291
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-41 Score=379.57 Aligned_cols=210 Identities=30% Similarity=0.520 Sum_probs=179.7
Q ss_pred EEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc----CChHH
Q 040099 1011 VQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK----LQVKW 1084 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~----i~~~~ 1084 (1236)
++++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997421 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEcCCC--CCChhhHHHHHHHH---h---------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHH
Q 040099 1085 LRQQMGVVSQEP--VLFSDTIRANIAEM---A---------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAI 1149 (1236)
Q Consensus 1085 lR~~i~~V~Qdp--~LF~gTIreNL~~~---a---------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARAL 1149 (1236)
.|++++||||+| .+|+.|++||+.-. . .+.+.++.+ |++ .........||||||||++|||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~lAraL 160 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELV--GLPEELLARSPFELSGGQMRRVAIAGVL 160 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC--CCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 888999999998 68889999999511 1 111222222 454 234567789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1150 VKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1150 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+.+|++|||||||++||+.+...+.+.|+++.+ +.|||+|||+++.+. .||||++|++|++++.|+++++.+.
T Consensus 161 ~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 161 AMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999998753 789999999999985 4999999999999999999998754
No 292
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-41 Score=376.28 Aligned_cols=220 Identities=28% Similarity=0.477 Sum_probs=185.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~ 456 (1236)
-++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 469999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCC--CCCHH-----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HATKE-----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~~~~-----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..++++++|++|++.+|..|++||+.++.. ...++ .+.++++..++. +++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 567889999999999998999999987532 11111 122233333221 1333445667789999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred ccccc
Q 040099 609 LENPY 613 (1236)
Q Consensus 609 ~~~~~ 613 (1236)
..++.
T Consensus 254 ~~~~~ 258 (271)
T PRK14238 254 FSNPS 258 (271)
T ss_pred HcCCC
Confidence 76543
No 293
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.1e-41 Score=365.90 Aligned_cols=201 Identities=28% Similarity=0.529 Sum_probs=174.4
Q ss_pred EEEeEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1011 VQFLRVSFKYPTRPH-IEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
|+++||+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999975311 159999999999999999999999999999999999999999999999999975 456778999
Q ss_pred EEEcCCCCCChh-hHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+|+||+|.+|.+ |++||+.-.. .+.+.++.+ |++........+||||||||++||||++++|++|
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~il 158 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVHDPPVL 158 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999985 9999985211 112223322 5666677788899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 159 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 159 LLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred EEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999875 47899999999999865 9999999999998865
No 294
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7e-41 Score=369.00 Aligned_cols=207 Identities=29% Similarity=0.456 Sum_probs=179.5
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH-Hhcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW-LRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~-lR~~i 1089 (1236)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQS---HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCCe---EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 4789999999743 5899999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhhh--------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMANA--------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDE 1160 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~~--------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDE 1160 (1236)
+|+||++.+|.. |++||+...... .+.+....++++........+||||||||++|||||+++|++|||||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDE 157 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDE 157 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 999999999986 999999621111 11122222334455667778999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1161 ATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1161 aTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++.
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 158 PTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999998754 6899999999999986 9999999999999999999983
No 295
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-41 Score=374.06 Aligned_cols=225 Identities=28% Similarity=0.499 Sum_probs=188.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 456 (1236)
-|+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 4699999999999999999999999999999999999763 489999999998765 44
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCCC---C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTHA---T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~---~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
...++.++|++|++.+|+.|++||+.++.... . ++++.++++..++.+ ++.+..++.+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-------EVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-------hhHHHhhcChhhCCHHHH
Confidence 56788899999999999899999999863211 1 122334444443322 233446677889999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999988
Q ss_pred cccccchhhh
Q 040099 609 LENPYGAYNR 618 (1236)
Q Consensus 609 ~~~~~~~y~~ 618 (1236)
..++...+.+
T Consensus 236 ~~~~~~~~~~ 245 (253)
T PRK14261 236 FENPHEELTE 245 (253)
T ss_pred HhCCCcHHHH
Confidence 7653333433
No 296
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-41 Score=376.41 Aligned_cols=216 Identities=29% Similarity=0.490 Sum_probs=185.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.|+++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999742 24699999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEccCCC--CCchhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 040099 464 GLVSQEPV--LLSSSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIA 535 (1236)
Q Consensus 464 ~~v~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiA 535 (1236)
+|++|++. ++..|+++|+.++... ... +++.++++..++.++ ....+.+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHHHHHH
Confidence 99999985 4456899999886422 122 233444444444333 3345568999999999999
Q ss_pred HHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEEeCccccccc
Q 040099 536 RAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 536 Ral~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||++.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999878999999999999999999988664
No 297
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=372.67 Aligned_cols=210 Identities=30% Similarity=0.477 Sum_probs=180.3
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~~ 1082 (1236)
.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGDF---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECCe---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 58999999999743 58999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhh---h------chHHHhhhh--ch----hhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMAN---A------NGFISGLQE--GY----DTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~---~------~~~i~~lp~--Gl----dt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||++.+|..|++||+.-... . .+.+..+-+ |+ +...+....+||||||||++|||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~lar 162 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIAR 162 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHH
Confidence 678899999999999999999999952111 1 111111111 22 33456778899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|+|++.|+++++.+.
T Consensus 163 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14242 163 ALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTR 238 (253)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 999999999999999999999999999999988667899999999999865 999999999999999999999865
No 298
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-41 Score=346.56 Aligned_cols=220 Identities=27% Similarity=0.448 Sum_probs=190.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~ 462 (1236)
-++++|++-.|.. .++|++|||++++||+++++||||+|||||++.|+|+.+|.+|+|.++|+|+...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999963 57999999999999999999999999999999999999999999999999999998765 5778
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
|+||||.-.+|+. ||+||+.+|.....+++.. ....++-..-+| -+......++.+|||||+|.+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999976 9999999874322211111 111233344556 467777888999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccc
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|++|+|||||.+|-|.-.+.|.+.|+++++ +.||++|-++..... .|||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999974 569999999999875 5999999999999999999999876
No 299
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-41 Score=365.65 Aligned_cols=197 Identities=36% Similarity=0.567 Sum_probs=170.2
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 468999999974 358999999999999999999999999999999999999999999999999976543 577899
Q ss_pred EEcCCCCCCh-hhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFS-DTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~-gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||+|.+|. .|++||+.-... +.+++..+ |++........+||||||||++|||||+++|++||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ll 153 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALAREPSLLL 153 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999998886 599999852111 11222222 55555666778999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1158 LDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
|||||++||+++...+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 154 LDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999875 37899999999999865 9999999999998876
No 300
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=381.13 Aligned_cols=215 Identities=33% Similarity=0.520 Sum_probs=184.8
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 689999999997 34699999999999999999999999999999999999999999999999999999886 5789
Q ss_pred EEEcCCCCCChh-hHHHHHH---H------HhhhchHHHhhhh--chhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIA---E------MANANGFISGLQE--GYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~---~------~a~~~~~i~~lp~--Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
++|+|+..||+- ||+||++ + .+.....+..+-+ |++..-.....+|||||+||+||||||..+|++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLL 159 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVLL 159 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchhh
Confidence 999999999975 9999985 1 1111112211111 33334446678999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhccCcccHH
Q 040099 1158 LDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLISTKNGIYTS 1229 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1229 (1236)
||||-||||..-...++.-|++.. .|.|.|+|||+-+... -+|||+||++|+|...|+|+|+..++...|-.
T Consensus 160 LDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~~fVA 234 (352)
T COG3842 160 LDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPATRFVA 234 (352)
T ss_pred hcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcchHHHH
Confidence 999999999999999999988764 3789999999999875 49999999999999999999999987766643
No 301
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=372.67 Aligned_cols=213 Identities=29% Similarity=0.478 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998877777788999
Q ss_pred EEccCCCC-CchhHHHHHhcCCCCC--C----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVL-LSSSIRDNIAYGKTHA--T----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l-~~~ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+ +..|++||+.++.... . ++++.++++..++.+ .......+||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHHHHHHHH
Confidence 99999987 5679999998864211 1 123444444444433 3344556899999999999999
Q ss_pred hc------CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccc
Q 040099 538 MI------KDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 538 l~------~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l 608 (1236)
|+ .+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 4789999999999986 4999999999999999998887
Q ss_pred ccc
Q 040099 609 LEN 611 (1236)
Q Consensus 609 ~~~ 611 (1236)
...
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 653
No 302
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.7e-41 Score=374.14 Aligned_cols=215 Identities=32% Similarity=0.537 Sum_probs=182.4
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC--------
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF-------- 454 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-------- 454 (1236)
+.++++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999963 4699999999999999999999999999999999999999999999999988542
Q ss_pred -----CHHHHhcceEEEccCCCCCch-hHHHHHhcCCC---CCCH----HHHHHHHHHhccHHHHHhCCCCccccc-cCC
Q 040099 455 -----QLKWIREKIGLVSQEPVLLSS-SIRDNIAYGKT---HATK----EEIQAAAEAANASHFIKNLPQGLDTNV-GEH 520 (1236)
Q Consensus 455 -----~~~~~r~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~-g~~ 520 (1236)
....++++++||+|++.+|+. |++||+.++.. .... +++.++++.. |+.... ...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~ 149 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKV-----------GIDERAQGKY 149 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------CCChhhhhCC
Confidence 134567899999999999975 99999986421 1122 2233333333 444332 456
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCE
Q 040099 521 GIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGK 598 (1236)
Q Consensus 521 g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~ 598 (1236)
...||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 678999999999999999999999999999999999999999999998854 7999999999999986 99999999999
Q ss_pred EEEEeCccccccc
Q 040099 599 IVEKGTHSELLEN 611 (1236)
Q Consensus 599 i~~~g~~~~l~~~ 611 (1236)
+++.|+++++...
T Consensus 230 i~~~~~~~~~~~~ 242 (257)
T PRK10619 230 IEEEGAPEQLFGN 242 (257)
T ss_pred EEEeCCHHHhhhC
Confidence 9999999988754
No 303
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-41 Score=377.49 Aligned_cols=213 Identities=31% Similarity=0.492 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecC--CCCHHHHhcc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLK--EFQLKWIREK 462 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~~ 462 (1236)
|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999963 46999999999999999999999999999999999999999999999999985 3344567889
Q ss_pred eEEEccCCC--CCchhHHHHHhcCCC--CCCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 463 IGLVSQEPV--LLSSSIRDNIAYGKT--HATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 463 i~~v~Q~~~--l~~~ti~~ni~~g~~--~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
|+||+|++. ++..|+.+|+.++.. ..+.+ ++.++++..++.++ ......+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHF-----------RHQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhH-----------hcCCchhCCHHHHHHHHH
Confidence 999999985 567799999987421 12222 23344444444433 234456899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999865 999999999999999999887654
No 304
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.7e-41 Score=371.23 Aligned_cols=212 Identities=26% Similarity=0.472 Sum_probs=180.1
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 463 (1236)
|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999963 46999999999999999999999999999999999999999999999999998776554 46789
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCCCC--HH-HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTHAT--KE-EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~~~--~~-~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
+|++|++.+|+. |++||+.++..... .+ ...++++.. ++++........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~----------~~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELF----------PVLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHH----------HhHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999976 99999987643211 11 112222222 12333455666789999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
++|+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998764 7899999999999975 9999999999999999998873
No 305
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=6.4e-41 Score=353.74 Aligned_cols=178 Identities=35% Similarity=0.657 Sum_probs=164.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 4789999999742 23699999999999999999999999999999999999999999999999988665 566788999
Q ss_pred EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 465 LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 465 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
|++|++.+|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 358999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCEEEEEe
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~g 603 (1236)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998754
No 306
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=370.99 Aligned_cols=216 Identities=31% Similarity=0.513 Sum_probs=180.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecC------CCCHHH
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLK------EFQLKW 458 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~------~~~~~~ 458 (1236)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 46999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcceEEEccCCCCCch-hHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 459 IREKIGLVSQEPVLLSS-SIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 459 ~r~~i~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
+|++|+|++|++.+|.. |++|||.++.. ....++..+ .+.+++..+ |++........+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALA-----RAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 78899999999999875 99999975311 112222111 123344444 55555566667999999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
|||++.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999998754 7999999999999865 99999999999999999887654
No 307
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=8.7e-41 Score=387.14 Aligned_cols=213 Identities=27% Similarity=0.436 Sum_probs=184.6
Q ss_pred cccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCC--cEEEECCeecccCChHHH
Q 040099 1008 MGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSS--GHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1008 ~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~--G~I~idG~di~~i~~~~l 1085 (1236)
.|.|+++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|.|+++|++ |+|.+||.++...++ .
T Consensus 3 ~~~l~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGAN---TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECCe---EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 4679999999999743 58999999999999999999999999999999999999999 999999999987665 3
Q ss_pred hcceEEEcCCCCCChh-hHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1086 RQQMGVVSQEPVLFSD-TIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~g-TIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
+++|++|+|++.+|.. |++|||.-... +.+.++.+ |++........+||||||||+||||||+++
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLARAL~~~ 155 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIARAIAIE 155 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 6789999999999976 99999961111 11122211 555556677789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcC---CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMV---DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~---~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|++||||||||+||+.+...+++.|+++.+ +.|+|+|||+++.+.. ||+|+||++|++++.|+++++.+++...|
T Consensus 156 P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~~ 234 (362)
T TIGR03258 156 PDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADGF 234 (362)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcHH
Confidence 999999999999999999999999988754 6799999999999865 99999999999999999999998755444
No 308
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.6e-41 Score=365.45 Aligned_cols=201 Identities=39% Similarity=0.653 Sum_probs=170.8
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEE
Q 040099 386 ELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGL 465 (1236)
Q Consensus 386 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 465 (1236)
+++|++++|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 478999999642 2469999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EccCCC--CCchhHHHHHhcCCCC--CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 466 VSQEPV--LLSSSIRDNIAYGKTH--ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 466 v~Q~~~--l~~~ti~~ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
++|++. +++.|++||+.++... ... +++.+.++..++ +.........||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGL-----------EGLRDRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCc-----------HhhhcCCcccCCHHHHHHHHHHHH
Confidence 999983 5678999999875321 122 223334444443 333445557899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCE
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGK 598 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~ 598 (1236)
|+++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999998854 7899999999999977 99999999985
No 309
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.2e-41 Score=365.37 Aligned_cols=202 Identities=32% Similarity=0.536 Sum_probs=171.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH---HHHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL---KWIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~ 461 (1236)
++++|++++|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999632 469999999999999999999999999999999999999999999999999977654 34678
Q ss_pred ceEEEccCCCCCch-hHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 462 KIGLVSQEPVLLSS-SIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
.++|++|++.+|.. |++||+.++.. ..+. +++.++++..++.+.. .....+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-----------RALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHH
Confidence 89999999999874 99999987532 1122 2344455555554433 33445899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEE
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKI 599 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i 599 (1236)
||||+.+|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 47899999999999875 999999999974
No 310
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-41 Score=373.27 Aligned_cols=219 Identities=32% Similarity=0.526 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 456 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 3899999999963 4699999999999999999999999999999999999984 899999999988653 33
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC---CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH---ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+++.++|++|++.+|..|++||+.++... ... +++.++++..++.+.+ ++..+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHH
Confidence 4567889999999999999999999875311 111 2344445555543322 2335667789999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999999877899999999999875 4999999999999999999988
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
.+.+
T Consensus 233 ~~~~ 236 (250)
T PRK14262 233 VERP 236 (250)
T ss_pred HhCC
Confidence 7653
No 311
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.2e-41 Score=382.83 Aligned_cols=217 Identities=26% Similarity=0.460 Sum_probs=180.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ....|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 4699999999999999999999999999999999999999999999999998654 35568899
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIK 540 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~ 540 (1236)
||++|++.++. .|++||+.+... ..+.++..+.++ +.++.+ |++........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIP-----SLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHH-----HHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999998885 599999975211 123332222111 122222 33333344456899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 541 DPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 541 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999885 47899999999999865 999999999999999999998654
No 312
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.55 Aligned_cols=218 Identities=31% Similarity=0.522 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecC-CCCHH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLK-EFQLK 457 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~-~~~~~ 457 (1236)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999985 44566
Q ss_pred HHhcceEEEccCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 458 WIREKIGLVSQEPVLLSSSIRDNIAYGKTH--A-TK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
.+|+.++|++|++.+|+.|++||+.++... . .. +++.++++..++.+.+ .+.....+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHH
Confidence 778899999999999999999999876321 1 11 2334444444443322 23445667789999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999988876
Q ss_pred cc
Q 040099 610 EN 611 (1236)
Q Consensus 610 ~~ 611 (1236)
.+
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 313
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=375.40 Aligned_cols=209 Identities=28% Similarity=0.493 Sum_probs=179.8
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 48899999999732 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCC--CCChhhHHHHHHHHh---hh-----chHHHh-hhh-chhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1090 GVVSQEP--VLFSDTIRANIAEMA---NA-----NGFISG-LQE-GYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1090 ~~V~Qdp--~LF~gTIreNL~~~a---~~-----~~~i~~-lp~-Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
+||||+| .+|..|++||+.-.. +. .+.+.. +.. |+..........||||||||++|||||+++|++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~lll 161 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIV 161 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999998 688899999995211 11 111111 111 44444555667899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHh
Q 040099 1158 LDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
|||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 162 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 162 LDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 999999999999999999999875 4789999999999985 59999999999999999987653
No 314
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-41 Score=376.58 Aligned_cols=213 Identities=31% Similarity=0.445 Sum_probs=179.3
Q ss_pred EEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH----hc
Q 040099 1012 QFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL----RQ 1087 (1236)
Q Consensus 1012 ~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l----R~ 1087 (1236)
.++||++.|.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 35577777753 358999999999999999999999999999999999999999999999999988765543 46
Q ss_pred ceEEEcCCCCCCh-hhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1088 QMGVVSQEPVLFS-DTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~-gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
+++|+||++.+|. .|++||+.-... +.+.++.+ |++..+.....+||||||||++|||||+++|+
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~ 180 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARALAVDPD 180 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999885 699999852111 11222222 45555566677899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccHH
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYTS 1229 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1229 (1236)
||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.+...|.+
T Consensus 181 illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~ 258 (269)
T cd03294 181 ILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYVR 258 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHHH
Confidence 9999999999999999999999998753 7899999999999865 9999999999999999999998765544543
No 315
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-41 Score=341.22 Aligned_cols=213 Identities=30% Similarity=0.474 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
+++.+++++|++ ...+++||||+++.||++||.|||||||||++++|..++.|++|.|++||.|.... +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 678999999974 34599999999999999999999999999999999999999999999999998664 456788999
Q ss_pred EEccCCCCCch-hHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
+++-+.-|+.. |++|||.|... +.+ +.++.+..+.. +++..+..+..+||-|+||||+||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l-----------~l~~~~~rRv~~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRL-----------QLLEYLDRRVGEFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh-----------ChHHHHHHHHhhhchhhHHHHHHHHH
Confidence 99987778765 99999997421 112 22333333333 44444445556899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|++||++++||||||+||..+.+.+++.+.+++. |+++|+.||.++.++. ||+++++++|+++..|+.+++.++
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999999999875 8999999999999985 999999999999999999888654
No 316
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-41 Score=371.30 Aligned_cols=217 Identities=24% Similarity=0.448 Sum_probs=185.0
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH-Hhcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW-IREKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i 463 (1236)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.+
T Consensus 4 l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 4 LTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred EEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 789999999963 46999999999999999999999999999999999999999999999999998776544 56789
Q ss_pred EEEccCCCCCch-hHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
+|++|++.+|.. |++||+.++.. ..+.++.. ..+.+.+..+ |++.........||||||||++||||++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALA 153 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHh
Confidence 999999998875 99999987532 11222211 1223455555 5666667777899999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
++|++|||||||++||+.+...+.+.++++. +++|+|++||+++.+.. ||++++|++|++++.|++++++..
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 9999999999999999999999999998875 47899999999987755 999999999999999999888653
No 317
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-41 Score=358.17 Aligned_cols=204 Identities=28% Similarity=0.498 Sum_probs=171.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++|++|+|.++ +||+||||+|++|+.+||+||||||||||+++++|+.+|++|+|.++|.++++... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999854 49999999999999999999999999999999999999999999999998876543 5789
Q ss_pred EEEcCCC---CCChhhHHHHHHH----------------HhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHc
Q 040099 1090 GVVSQEP---VLFSDTIRANIAE----------------MANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIV 1150 (1236)
Q Consensus 1090 ~~V~Qdp---~LF~gTIreNL~~----------------~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALl 1150 (1236)
|||||.. .-|+-||+|=+.- ...+.+.++.. |+...-...-..|||||+||+.|||||+
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~V--gm~~~~~r~i~~LSGGQ~QRV~lARAL~ 155 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERV--GMEDLRDRQIGELSGGQKQRVLLARALA 155 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHc--CchhhhCCcccccCcHHHHHHHHHHHhc
Confidence 9999954 4578899997640 01111111111 2222233444579999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1151 KEPKILLLDEATSALDIESERVVQDALDQVMV-DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1151 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
++|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. +|+|+.| |+++...|++++.+..
T Consensus 156 ~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~~~ 228 (254)
T COG1121 156 QNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVLTE 228 (254)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhccCH
Confidence 99999999999999999999999999999864 8999999999999965 9999999 5788999999998874
No 318
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.8e-41 Score=366.57 Aligned_cols=198 Identities=30% Similarity=0.503 Sum_probs=167.4
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEE
Q 040099 386 ELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGL 465 (1236)
Q Consensus 386 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 465 (1236)
+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 46999999999999999999999999999999999999999999999998764 46778999
Q ss_pred EccCCCC---CchhHHHHHhcCCCCC----------CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 466 VSQEPVL---LSSSIRDNIAYGKTHA----------TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 466 v~Q~~~l---~~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
|+|++.+ ++.|++||+.++.... ..+++.++++..++.++.. ....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHH
Confidence 9999876 5679999998864311 1234455555555554433 34468999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 57899999999999865 9999999886 55544
No 319
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=372.15 Aligned_cols=212 Identities=30% Similarity=0.483 Sum_probs=182.8
Q ss_pred cccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--C
Q 040099 1008 MGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--L 1080 (1236)
Q Consensus 1008 ~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i 1080 (1236)
.+.|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGKF---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCCe---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 4579999999999743 58999999999999999999999999999999999986 589999999999863 4
Q ss_pred ChHHHhcceEEEcCCCCCChhhHHHHHHHHhh-------------hchHHHhh--hhchhhhhcCCCCCCChhHHHHHHH
Q 040099 1081 QVKWLRQQMGVVSQEPVLFSDTIRANIAEMAN-------------ANGFISGL--QEGYDTLVGERGVQLSGGQKQRVAI 1145 (1236)
Q Consensus 1081 ~~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~-------------~~~~i~~l--p~Gldt~vge~G~~LSGGQrQRlaL 1145 (1236)
+...+|++++|+||+|.+|+.|++||+..... +.+.++.+ +.++....++...+||||||||++|
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 167 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCI 167 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHH
Confidence 56778999999999999999999999852111 11111111 1122345677788999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1146 ARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1146 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 168 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 245 (260)
T PRK10744 168 ARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIFTK 245 (260)
T ss_pred HHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999999998777899999999999865 999999999999999999999875
No 320
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.3e-40 Score=382.59 Aligned_cols=220 Identities=26% Similarity=0.410 Sum_probs=184.8
Q ss_pred cEEEeEEEEECCCCC----------CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc
Q 040099 1010 EVQFLRVSFKYPTRP----------HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK 1079 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~----------~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~ 1079 (1236)
-++++|++++|+.+. ...+++||||+|++||++||||+||||||||+++|+|+++|++|+|++||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996421 2468999999999999999999999999999999999999999999999999988
Q ss_pred CChH---HHhcceEEEcCCC--CCC-hhhHHHHHHHHhhh----------chHHHhhh--hchh-hhhcCCCCCCChhHH
Q 040099 1080 LQVK---WLRQQMGVVSQEP--VLF-SDTIRANIAEMANA----------NGFISGLQ--EGYD-TLVGERGVQLSGGQK 1140 (1236)
Q Consensus 1080 i~~~---~lR~~i~~V~Qdp--~LF-~gTIreNL~~~a~~----------~~~i~~lp--~Gld-t~vge~G~~LSGGQr 1140 (1236)
++.. .+|++|+||+|+| .|| ..||.|||.+.... .+.+..+- -|++ ........+||||||
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~ 167 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQC 167 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHHH
Confidence 8754 4678999999999 477 47999998632111 11111111 1342 234667789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 040099 1141 QRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHE 1217 (1236)
Q Consensus 1141 QRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~ 1217 (1236)
||++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|+++
T Consensus 168 QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~ 247 (331)
T PRK15079 168 QRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYD 247 (331)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 999999999999999999999999999999999999998754 7899999999999976 9999999999999999999
Q ss_pred HHhhccCcccHH
Q 040099 1218 SLISTKNGIYTS 1229 (1236)
Q Consensus 1218 eLl~~~~g~y~~ 1229 (1236)
++++++...|.+
T Consensus 248 ~i~~~~~~py~~ 259 (331)
T PRK15079 248 EVYHNPLHPYTK 259 (331)
T ss_pred HHHcCCCCHHHH
Confidence 998875555655
No 321
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.97 Aligned_cols=219 Identities=33% Similarity=0.504 Sum_probs=186.0
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 456 (1236)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 4699999999999999999999999999999999999875 799999999998643 34
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH--A-TK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+++.++|++|++.+|+.|++||+.++... . .. +++.++++.+++.+.+ ..........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-------KDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHHH
Confidence 5668889999999999999999999876321 1 11 2344555555543322 2234556778999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777999999999999865 999999999999999999998
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
...+
T Consensus 234 ~~~~ 237 (251)
T PRK14270 234 FLEP 237 (251)
T ss_pred hcCC
Confidence 7653
No 322
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.5e-40 Score=363.22 Aligned_cols=210 Identities=30% Similarity=0.488 Sum_probs=186.5
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH----HHHhc
Q 040099 386 ELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL----KWIRE 461 (1236)
Q Consensus 386 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~----~~~r~ 461 (1236)
.+.|+.|+|+.+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 569999999999999999999999999999999999999999999999998866542 23567
Q ss_pred ceEEEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 462 KIGLVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
.++|++|++.+|+.|++||+.++.+ ...++..++++..++.+++..+|.|+++.++....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999998999999998754 345566788888888888999999999999999999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHH--HHHHHc-cCceEEEEecCchhHhhcCeEEEEECCE
Q 040099 542 PRILLLDEATSALDSESGRMVQE--ALDRVM-INRTTVIVSHRLSLIRNANIIAVIQQGK 598 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~--~l~~~~-~~~t~i~itH~~~~~~~ad~i~vl~~G~ 598 (1236)
|++|||||||++||+.+...+.+ .++.+. .++|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 455543 3689999999999998899999999884
No 323
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=8.2e-41 Score=368.23 Aligned_cols=212 Identities=34% Similarity=0.520 Sum_probs=174.6
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH---HHHh
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL---KWIR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r 460 (1236)
|+++||+++|++.+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996321 1269999999999999999999999999999999999999999999999999987663 5678
Q ss_pred cceEEEccCC--CCC-chhHHHHHhcCCC----CCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChHHHHHH
Q 040099 461 EKIGLVSQEP--VLL-SSSIRDNIAYGKT----HATKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 461 ~~i~~v~Q~~--~l~-~~ti~~ni~~g~~----~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGqkqRi 532 (1236)
++++|++|++ .++ ..|++||+.++.. ...++....++ .+.+..+ |+. ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 8999999998 344 4699999986421 11111111111 1233333 443 345667789999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECCEEEEEe
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g 603 (1236)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998864 789999999999987 59999999999998764
No 324
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-40 Score=366.35 Aligned_cols=208 Identities=28% Similarity=0.421 Sum_probs=175.5
Q ss_pred cEEEEeEEEECCCCCC-CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHH---H
Q 040099 384 DIELKDVNFSYPARPD-EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKW---I 459 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~ 459 (1236)
-|+++|++++|++... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974211 35999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hcceEEEccCCCCCch-hHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 460 -REKIGLVSQEPVLLSS-SIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 460 -r~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
++.++|++|++.+|.. |++||+.++.. ... .+++.++++..++.+++.+ ....||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHH
Confidence 3579999999998875 99999986421 111 2344555555555544443 345899999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEEEEE
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKIVEK 602 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i~~~ 602 (1236)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|+++++
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998743 7899999999999888999999999999764
No 325
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=384.17 Aligned_cols=228 Identities=23% Similarity=0.372 Sum_probs=186.6
Q ss_pred EEEEeEEEECCCC-CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC----CCCcEEEECCeecCCCCHHHH
Q 040099 385 IELKDVNFSYPAR-PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD----PQAGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 385 i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~~~g~~~~~~~~~~~ 459 (1236)
|+++|++++|+.+ +...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|+++...+.+.+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 7999999999632 22469999999999999999999999999999999999986 589999999999988776554
Q ss_pred h----cceEEEccCCC--CCc-hhHHHHHhcCCC---C-----CC----HHHHHHHHHHhccHHHHHhCCCCccccccCC
Q 040099 460 R----EKIGLVSQEPV--LLS-SSIRDNIAYGKT---H-----AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEH 520 (1236)
Q Consensus 460 r----~~i~~v~Q~~~--l~~-~ti~~ni~~g~~---~-----~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~ 520 (1236)
+ +.|+||+|++. ++. .||.+|+..... . .. .+++.++++..++.+.. ......
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHK--------DAMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChH--------HHHhCC
Confidence 3 47999999986 333 489999864210 0 01 12344555555553211 123445
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECC
Q 040099 521 GIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQG 597 (1236)
Q Consensus 521 g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G 597 (1236)
+.+||||||||++|||||+.+|++||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 569999999999999999999999999999999999999999999998864 7899999999999965 9999999999
Q ss_pred EEEEEeCcccccccccchhhhhH
Q 040099 598 KIVEKGTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 598 ~i~~~g~~~~l~~~~~~~y~~~~ 620 (1236)
+|++.|+.+++..++...|.+.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~~l 258 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQAL 258 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHHHH
Confidence 99999999999887667776643
No 326
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=376.82 Aligned_cols=211 Identities=27% Similarity=0.447 Sum_probs=181.4
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecc--cCChHHHhc
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQ--KLQVKWLRQ 1087 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~--~i~~~~lR~ 1087 (1236)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 235999999999999999999999999999999999999999999999999984 344667899
Q ss_pred ceEEEcCCC--CCChhhHHHHHHHHh---hh-----chHHHhhh--hchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1088 QMGVVSQEP--VLFSDTIRANIAEMA---NA-----NGFISGLQ--EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1088 ~i~~V~Qdp--~LF~gTIreNL~~~a---~~-----~~~i~~lp--~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
+++|+||+| .+|+.|++||+.-.. +. .+.+..+= -|++........+||||||||++|||||+.+|+|
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p~l 162 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKV 162 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 999999998 578899999995211 10 01111111 1555556677889999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 163 LilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 163 LVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999998764 789999999999997 5999999999999999999998764
No 327
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=366.95 Aligned_cols=204 Identities=32% Similarity=0.478 Sum_probs=176.1
Q ss_pred cEEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH---H
Q 040099 1010 EVQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW---L 1085 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~---l 1085 (1236)
-++++||+++|+.+. ..++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|++||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997432 136999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cceEEEcCCCCCChh-hHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1086 R-QQMGVVSQEPVLFSD-TIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1086 R-~~i~~V~Qdp~LF~g-TIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
| +.++|+||+|.+|.. |++||+.-.. .+.+.++.+ |++........+||||||||++||||++.
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la~al~~ 162 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV--GLEHRANHRPSELSGGERQRVAIARALVN 162 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 3 679999999998875 9999985211 111222222 56556667778999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecC
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGS 1215 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt 1215 (1236)
+|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 163 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 163 NPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999874 4789999999999999999999999999998875
No 328
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=371.50 Aligned_cols=218 Identities=32% Similarity=0.543 Sum_probs=185.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ-----AGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 456 (1236)
.|+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 46999999999999999999999999999999999999997 6999999999864 344
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC--C-CH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH--A-TK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+|+.++||+|++.+|+.|++||+.++... . .. +.+.++++..++.++ +.+.....+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDE-------VKDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchh-------hhhHhhCCcccCCHHHH
Confidence 5678899999999999989999999986321 1 11 223333444444332 23345677889999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988668999999999999876 899999999999999999988
Q ss_pred ccc
Q 040099 609 LEN 611 (1236)
Q Consensus 609 ~~~ 611 (1236)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 654
No 329
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=374.11 Aligned_cols=219 Identities=26% Similarity=0.500 Sum_probs=186.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCCC-HH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEFQ-LK 457 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~-~~ 457 (1236)
.++++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 4699999999999999999999999999999999999986 7999999999987653 34
Q ss_pred HHhcceEEEccCCCCCchhHHHHHhcCCC---CCCHHHHHH----HHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 458 WIREKIGLVSQEPVLLSSSIRDNIAYGKT---HATKEEIQA----AAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~---~~~~~~~~~----~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
.++++++|++|++.+|+.|++||+.++.. ..+.++..+ .++..++. ..+++.....+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLW-------DAVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC-------chhhhHhhCCcccCCHHHHH
Confidence 67889999999999999999999997632 123333322 22223222 22234456677899999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999865 9999999999999999999997
Q ss_pred ccc
Q 040099 610 ENP 612 (1236)
Q Consensus 610 ~~~ 612 (1236)
+.+
T Consensus 251 ~~~ 253 (276)
T PRK14271 251 SSP 253 (276)
T ss_pred hCc
Confidence 653
No 330
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=385.15 Aligned_cols=211 Identities=32% Similarity=0.500 Sum_probs=181.8
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.|+...+. .|+++
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3789999999974 358999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhh----------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMAN----------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~----------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
+||+|++.+|+. |++||+.-... +.+..+.+ |++.........||||||||++|||||+++
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalArAL~~~ 154 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALARALAVE 154 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999999975 99999962111 11112211 444445567789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++...|
T Consensus 155 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 155 PQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 999999999999999999999999998764 6899999999999865 99999999999999999999988754444
No 331
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=375.65 Aligned_cols=213 Identities=26% Similarity=0.433 Sum_probs=184.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999753334589999999999999999999999999999999999999999999999999887778889999
Q ss_pred EEEcCCC--CCChhhHHHHHHHHhh---h-----chHHHhhhh--chhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1090 GVVSQEP--VLFSDTIRANIAEMAN---A-----NGFISGLQE--GYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1090 ~~V~Qdp--~LF~gTIreNL~~~a~---~-----~~~i~~lp~--Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
+|+||+| .++..|+.|||..... . .+.+..+-+ |+..........||||||||++|||||+++|+|||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~lll 163 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEIII 163 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999998 4778899999952111 1 111111111 45445566778999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1158 LDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 164 lDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 164 LDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999998754 7899999999999988999999999999999999999864
No 332
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.9e-41 Score=364.48 Aligned_cols=197 Identities=34% Similarity=0.547 Sum_probs=168.5
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH---HHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK---WLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~---~lR~ 1087 (1236)
++++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999742 23599999999999999999999999999999999999999999999999999876543 4788
Q ss_pred ceEEEcCCCCCCh-hhHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1088 QMGVVSQEPVLFS-DTIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~-gTIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
+++|+||+|.+|. .|++||+.... .+.+.++.+ |++........+||||||||++|||||+++|+
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ 158 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARAIVHKPP 158 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999887 59999985211 111222221 45445556667899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEE
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMI 1210 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~I 1210 (1236)
||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 159 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 159 LLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999998874 47899999999999975 999999999975
No 333
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.7e-40 Score=370.87 Aligned_cols=209 Identities=33% Similarity=0.529 Sum_probs=181.5
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC---------
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ--------- 1081 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~--------- 1081 (1236)
|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGIL---TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCCe---eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 5789999999743 5899999999999999999999999999999999999999999999999987653
Q ss_pred ----hHHHhcceEEEcCCCCCCh-hhHHHHHHHHh-------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHH
Q 040099 1082 ----VKWLRQQMGVVSQEPVLFS-DTIRANIAEMA-------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRV 1143 (1236)
Q Consensus 1082 ----~~~lR~~i~~V~Qdp~LF~-gTIreNL~~~a-------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRl 1143 (1236)
...+|++++|++|++.+|. .|++||+.... .+.+.+..+ |++.........||||||||+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv 155 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMV--GLADKADHMPAQLSGGQQQRV 155 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CChhHhhcChhhcCHHHHHHH
Confidence 2467889999999999885 79999995210 112222222 566666777889999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1144 AIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1144 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
+|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 156 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 156 AIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999964 9999999999999999999998
Q ss_pred hccC
Q 040099 1221 STKN 1224 (1236)
Q Consensus 1221 ~~~~ 1224 (1236)
+.+.
T Consensus 236 ~~~~ 239 (252)
T TIGR03005 236 RQPK 239 (252)
T ss_pred cCCC
Confidence 7543
No 334
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=380.53 Aligned_cols=218 Identities=30% Similarity=0.484 Sum_probs=183.4
Q ss_pred cEEEeEEEEECCCCC-------CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh
Q 040099 1010 EVQFLRVSFKYPTRP-------HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~-------~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~ 1082 (1236)
-|+++|++++|+.+. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997421 2468999999999999999999999999999999999999999999999999988764
Q ss_pred ---HHHhcceEEEcCCCC--CCh-hhHHHHHHHHh-------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHH
Q 040099 1083 ---KWLRQQMGVVSQEPV--LFS-DTIRANIAEMA-------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQR 1142 (1236)
Q Consensus 1083 ---~~lR~~i~~V~Qdp~--LF~-gTIreNL~~~a-------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQR 1142 (1236)
..+|++|+||+|+|. |+. -||.+|+.+.. .+.++++.+ |++ .........||||||||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~p~~LSgGq~QR 162 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKV--GLRPEHYDRYPHMFSGGQRQR 162 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHC--CCChHHhcCCCccCCHHHHHH
Confidence 357889999999993 554 48888885221 112223322 332 23345667899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 040099 1143 VAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1143 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|+++++
T Consensus 163 v~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~ 242 (327)
T PRK11308 163 IAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQI 242 (327)
T ss_pred HHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999999975 999999999999999999999
Q ss_pred hhccCcccHH
Q 040099 1220 ISTKNGIYTS 1229 (1236)
Q Consensus 1220 l~~~~g~y~~ 1229 (1236)
++++...|.+
T Consensus 243 ~~~p~hpyt~ 252 (327)
T PRK11308 243 FNNPRHPYTQ 252 (327)
T ss_pred hcCCCCHHHH
Confidence 9875555655
No 335
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.7e-40 Score=373.04 Aligned_cols=218 Identities=31% Similarity=0.466 Sum_probs=183.1
Q ss_pred EEEeEEEEECCCC------CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH-
Q 040099 1011 VQFLRVSFKYPTR------PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK- 1083 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~- 1083 (1236)
|+++||++.|+.. .+..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..++..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 134699999999999999999999999999999999999999999999999999877654
Q ss_pred --HHhcceEEEcCCCC--CC-hhhHHHHHHHHh-------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHH
Q 040099 1084 --WLRQQMGVVSQEPV--LF-SDTIRANIAEMA-------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVA 1144 (1236)
Q Consensus 1084 --~lR~~i~~V~Qdp~--LF-~gTIreNL~~~a-------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRla 1144 (1236)
.+|+.++|+||+|. ++ ..|++||+.... .+.++++.+ |++ ......+..||||||||++
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe~qrv~ 160 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMV--GLRSEDADKLPRQLSGGQLQRIN 160 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCChhhhhCChhhCCHHHHHHHH
Confidence 36788999999983 44 469999984211 112223222 454 3456677899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1145 IARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1145 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
|||||+.+|+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 161 laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (265)
T TIGR02769 161 IARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLS 240 (265)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999975 99999999999999999999987
Q ss_pred ccCcccHHh
Q 040099 1222 TKNGIYTSL 1230 (1236)
Q Consensus 1222 ~~~g~y~~L 1230 (1236)
.++..+..+
T Consensus 241 ~~~~~~~~~ 249 (265)
T TIGR02769 241 FKHPAGRNL 249 (265)
T ss_pred CCCHHHHHH
Confidence 534444444
No 336
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.4e-40 Score=364.76 Aligned_cols=209 Identities=25% Similarity=0.446 Sum_probs=180.4
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999888877788899
Q ss_pred EEEccCCCCCchhHHHHHhcCCC---CC-CHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChHHHHHHHHHHHh
Q 040099 464 GLVSQEPVLLSSSIRDNIAYGKT---HA-TKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGGQKQRVAIARAM 538 (1236)
Q Consensus 464 ~~v~Q~~~l~~~ti~~ni~~g~~---~~-~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgGqkqRiaiARal 538 (1236)
+|++|++.+|+.|++||+.++.. .. ..+++. +.++.+ |+. +.....+.+||||||||++|||||
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFL---------DDLERF--ALPDTILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHH---------HHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHH
Confidence 99999999998999999987421 11 112222 333444 443 345667789999999999999999
Q ss_pred cCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEE-CCEEEEEeCcc
Q 040099 539 IKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQ-QGKIVEKGTHS 606 (1236)
Q Consensus 539 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~-~G~i~~~g~~~ 606 (1236)
+++|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999999999998753 789999999999998899999994 67778889886
No 337
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=376.51 Aligned_cols=214 Identities=33% Similarity=0.563 Sum_probs=181.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC--CCHHHHhcc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE--FQLKWIREK 462 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 462 (1236)
|+++||+++|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999963 2469999999999999999999999999999999999999999999999999852 234467889
Q ss_pred eEEEccCC--CCCchhHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 463 IGLVSQEP--VLLSSSIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 463 i~~v~Q~~--~l~~~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
|+|++|++ .+|+.|+.||+.++.. ..+. +++.++++..++.++ ....+.+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGF-----------ENKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchh-----------hcCChhhCCHHHHHHHHH
Confidence 99999997 5788899999987632 1222 233444444444332 334456899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccccccc
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|||++.+|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+. .||+|++|++|++++.|++++++..
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998854 789999999999986 4999999999999999999988754
No 338
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=370.92 Aligned_cols=213 Identities=28% Similarity=0.457 Sum_probs=180.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~i--~~ 1082 (1236)
.|+++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGEK---QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCCe---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 59999999999743 589999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHh---h---------hchHHHhh--hhchhhhhcCCCCCCChhHHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMA---N---------ANGFISGL--QEGYDTLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a---~---------~~~~i~~l--p~Gldt~vge~G~~LSGGQrQRlaLARA 1148 (1236)
..+|+.++|+||++.+|+.|++||+.-.. + +.+.++.+ .+.++.........||||||||++||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lara 168 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIART 168 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHH
Confidence 56788999999999999999999995211 1 11112211 0111234456677899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCc
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNG 1225 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g 1225 (1236)
|+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.+++..
T Consensus 169 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 246 (258)
T PRK14268 169 LAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHNPRE 246 (258)
T ss_pred HHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCC
Confidence 99999999999999999999999999999988778999999999999865 999999999999999999999865333
No 339
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=373.72 Aligned_cols=210 Identities=29% Similarity=0.545 Sum_probs=183.6
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999732 24699999999999999999999999999999999999999999999999999888878899999
Q ss_pred EEEcCCC--CCChhhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1090 GVVSQEP--VLFSDTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1090 ~~V~Qdp--~LF~gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
+|+||+| .++..|++||+.-... +.++++.+ |++........+||||||||++|||||+++|++
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLALNPEI 163 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 9999998 4567899999952111 11112221 566566777889999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 164 llLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 164 IIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999998753 4899999999999988999999999999999999998764
No 340
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=373.24 Aligned_cols=214 Identities=28% Similarity=0.465 Sum_probs=185.1
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREK 462 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 462 (1236)
..|+++||+++|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 35899999999963 469999999999999999999999999999999999999999999999999988887778889
Q ss_pred eEEEccCCCCCc-hhHHHHHhcCC-CC------C---CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 463 IGLVSQEPVLLS-SSIRDNIAYGK-TH------A---TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 463 i~~v~Q~~~l~~-~ti~~ni~~g~-~~------~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
++|++|++.+|. .|++||+.++. +. . ..+++.++++..++.++ ....+.+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHHH
Confidence 999999998875 59999998753 11 0 11234455555555443 344556899999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
++||||++++|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998853 7899999999998865 999999999999999998887
Q ss_pred cc
Q 040099 609 LE 610 (1236)
Q Consensus 609 ~~ 610 (1236)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 64
No 341
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.8e-40 Score=370.59 Aligned_cols=207 Identities=33% Similarity=0.527 Sum_probs=179.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC--------h
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ--------V 1082 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~--------~ 1082 (1236)
++++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHGQ---TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECCe---eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 7899999999743 5899999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcceEEEcCCCCCCh-hhHHHHHHHHh----h---------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFS-DTIRANIAEMA----N---------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~-gTIreNL~~~a----~---------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARA 1148 (1236)
..+|++++||||+|.+|. .|++||+.... + +.++++.+ |++........+||||||||++||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv~la~a 158 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKV--GLAGKETSYPRRLSGGQQQRVAIARA 158 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCcchhhCChhhCChHHHHHHHHHHH
Confidence 567889999999999886 69999995211 0 11122221 55555566778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMV-DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 159 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 234 (250)
T PRK11264 159 LAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFAD 234 (250)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999988754 7899999999999965 999999999999999999999765
No 342
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.7e-40 Score=363.74 Aligned_cols=204 Identities=29% Similarity=0.502 Sum_probs=172.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH---HHhc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK---WIRE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~ 461 (1236)
|+++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 689999999952 24699999999999999999999999999999999999999999999999999876543 3678
Q ss_pred ceEEEccCCCCC-chhHHHHHhcCCC--CCCHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 040099 462 KIGLVSQEPVLL-SSSIRDNIAYGKT--HATKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAI 534 (1236)
Q Consensus 462 ~i~~v~Q~~~l~-~~ti~~ni~~g~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiai 534 (1236)
.++|++|++.++ ..|++||+.++.. ..+.++ +.++++..++.++ ......+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDK-----------AKNFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCchhCCHHHHHHHHH
Confidence 999999999875 5699999988531 122222 3344444444333 334456899999999999
Q ss_pred HHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEE
Q 040099 535 ARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVE 601 (1236)
Q Consensus 535 ARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~ 601 (1236)
|||++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999875 47899999999999976 99999999999863
No 343
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=370.15 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=180.5
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecc--cCCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQ--KLQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~--~i~~ 1082 (1236)
.|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|++||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGSN---HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCCe---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 48899999999743 589999999999999999999999999999999999987 4999999999997 4566
Q ss_pred HHHhcceEEEcCCCCCChh-hHHHHHHHHhhhc----------hHHHh-hhh-ch----hhhhcCCCCCCChhHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSD-TIRANIAEMANAN----------GFISG-LQE-GY----DTLVGERGVQLSGGQKQRVAI 1145 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~g-TIreNL~~~a~~~----------~~i~~-lp~-Gl----dt~vge~G~~LSGGQrQRlaL 1145 (1236)
..+|++++|+||++.+|.. |++||+....... ..+.. +.. |+ .........+||||||||++|
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVI 160 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHHH
Confidence 6788999999999999976 9999996321110 11111 111 22 233556778999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1146 ARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1146 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++..+
T Consensus 161 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 239 (253)
T PRK14267 161 ARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFENP 239 (253)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999999999998777999999999999865 9999999999999999999998653
No 344
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.5e-41 Score=365.73 Aligned_cols=198 Identities=34% Similarity=0.509 Sum_probs=170.2
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH----H
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW----L 1085 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~----l 1085 (1236)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999997421 135999999999999999999999999999999999999999999999999998776432 4
Q ss_pred hcceEEEcCCCCCChh-hHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1086 RQQMGVVSQEPVLFSD-TIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~g-TIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
|++++|+||+|.+|.+ |++||+.-.. .+.+.+..+ |++........+||||||||++|||||+++
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 158 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIARALAND 158 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHHHHccC
Confidence 6789999999999986 9999985211 112222222 555556677789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEE
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMI 1210 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~I 1210 (1236)
|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 159 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 159 PKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999998754 7899999999999988999999999974
No 345
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=372.52 Aligned_cols=219 Identities=32% Similarity=0.509 Sum_probs=186.6
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCC--CC
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKE--FQ 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~ 455 (1236)
+.|+++||+++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36899999999963 4699999999999999999999999999999999999985 48999999999854 34
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCCC---CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH---AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
...++++|+||+|++.+|+.|++||+.++... .. ++.+.++++.+++.+++. ......+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVK-------DKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHH
Confidence 56678899999999999999999999875311 11 133455666666644432 22445667899999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEE-----CCEEEEE
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQ-----QGKIVEK 602 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~-----~G~i~~~ 602 (1236)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998777999999999999865 99999998 5999999
Q ss_pred eCccccccc
Q 040099 603 GTHSELLEN 611 (1236)
Q Consensus 603 g~~~~l~~~ 611 (1236)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999998764
No 346
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.4e-41 Score=384.62 Aligned_cols=217 Identities=28% Similarity=0.495 Sum_probs=180.7
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
-|+++|++++|++ +.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+.+ ...++.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 46999999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEEccCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 040099 464 GLVSQEPVLLS-SSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIK 540 (1236)
Q Consensus 464 ~~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~ 540 (1236)
|||||++.++. .|++||+.+... ..+.++..+.++ +++..+ |++........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIP-----SLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHH-----HHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999998874 599999985321 122222222111 122211 33333344445899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 541 DPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 541 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+.+++..+
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999885 47999999999999965 999999999999999999998654
No 347
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=374.13 Aligned_cols=212 Identities=33% Similarity=0.528 Sum_probs=184.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-++++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++.+.+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999743 23599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcCCC--CCChhhHHHHHHHHhhh--------chHHH-hhhh-chhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1090 GVVSQEP--VLFSDTIRANIAEMANA--------NGFIS-GLQE-GYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1090 ~~V~Qdp--~LF~gTIreNL~~~a~~--------~~~i~-~lp~-Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
+|+||+| .+++.|++|||...... .+.+. .+.. |++..+......||||||||++|||||+.+|+|||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 163 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDIII 163 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999998 56778999999521110 01111 1111 56556667778999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1158 LDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 164 LDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 164 LDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999998764 7899999999999988999999999999999999998764
No 348
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-40 Score=380.57 Aligned_cols=216 Identities=24% Similarity=0.433 Sum_probs=184.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+++++|
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999996 2469999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EEccCCCCCch-hHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
|+||++.+|.. |++||+.+... ....++..+. +++.+..+ |++........+||||||||++|||||+++
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQR-----VEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 99999986321 1122221111 12233333 555555666779999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||||++|++|++++.|+.+++...
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998778999999999999876 999999999999999999998653
No 349
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=377.56 Aligned_cols=211 Identities=27% Similarity=0.453 Sum_probs=179.0
Q ss_pred cEEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc--------
Q 040099 1010 EVQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK-------- 1079 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~-------- 1079 (1236)
.|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999997532 1359999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHHHhcceEEEcCCC--CCChhhHHHHHHH---H---------hhhchHHHhhhhchh-hhh
Q 040099 1080 ----------------LQVKWLRQQMGVVSQEP--VLFSDTIRANIAE---M---------ANANGFISGLQEGYD-TLV 1128 (1236)
Q Consensus 1080 ----------------i~~~~lR~~i~~V~Qdp--~LF~gTIreNL~~---~---------a~~~~~i~~lp~Gld-t~v 1128 (1236)
.+...+|++|+||||+| .+|..|++|||.- . ..+.+.++.+ |++ ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~ 159 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELV--GLDESYL 159 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHc--CCChhhh
Confidence 13467889999999986 6888999999951 1 1112222221 454 345
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEe
Q 040099 1129 GERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVS 1206 (1236)
Q Consensus 1129 ge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~ 1206 (1236)
.....+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||||++|+
T Consensus 160 ~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~ 239 (305)
T PRK13651 160 QRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFK 239 (305)
T ss_pred hCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEE
Confidence 67778999999999999999999999999999999999999999999998874 4789999999999875 599999999
Q ss_pred CCEEEEecChhHHhhc
Q 040099 1207 QGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1207 ~G~Ive~Gt~~eLl~~ 1222 (1236)
+|++++.|+++++.++
T Consensus 240 ~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 240 DGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEECCHHHHhcC
Confidence 9999999999998765
No 350
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-40 Score=378.84 Aligned_cols=207 Identities=27% Similarity=0.458 Sum_probs=178.1
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|.|+...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999974 35999999999999999999999999999999999999999999999999997654 4578999
Q ss_pred EEEcCCCCCCh-hhHHHHHHHHhhh------------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFS-DTIRANIAEMANA------------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~-gTIreNL~~~a~~------------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
|||||+|.+|. .|++||+.-.+.. .++++.+ |+.........+||||||||++|||||+.+|++|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~ll 160 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALVNDPDVL 160 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEE
Confidence 99999999886 6999999522211 1122211 2222223344589999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+|||||++||+.+.+.+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 161 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 161 VLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999875 47899999999999966 999999999999999999999765
No 351
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.9e-40 Score=373.38 Aligned_cols=219 Identities=28% Similarity=0.411 Sum_probs=182.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH---HHh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK---WLR 1086 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~---~lR 1086 (1236)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999974 3589999999999999999999999999999999999999999999999999876543 457
Q ss_pred cceEEEcCCCCCChh-hHHHHHHHHhhh----c-----hHHH-hhh-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1087 QQMGVVSQEPVLFSD-TIRANIAEMANA----N-----GFIS-GLQ-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~g-TIreNL~~~a~~----~-----~~i~-~lp-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
++++|+||++.+|.+ |++||+...... . ..+. .+. -|++........+||||||||++|||||+++|+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~ 163 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPD 163 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 889999999999986 999998521110 0 0111 111 134444455667899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccHHhh
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYTSLI 1231 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~ 1231 (1236)
+|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.++....+..++
T Consensus 164 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 243 (269)
T PRK11831 164 LIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPDPRVRQFL 243 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCcHHHHHHH
Confidence 9999999999999999999999998753 6899999999999866 999999999999999999999875333344444
No 352
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.7e-40 Score=371.53 Aligned_cols=212 Identities=29% Similarity=0.473 Sum_probs=182.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888878888899
Q ss_pred EEccCCCC-CchhHHHHHhcCCCCC-------C---HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 040099 465 LVSQEPVL-LSSSIRDNIAYGKTHA-------T---KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVA 533 (1236)
Q Consensus 465 ~v~Q~~~l-~~~ti~~ni~~g~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRia 533 (1236)
|++|++.+ +..|++||+.++.... . .+++.++++..++ .......+..||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTEL-----------SHLADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCc-----------HhhhcCCcccCCHHHHHHHH
Confidence 99999864 4679999998863210 1 1233344444443 33344556789999999999
Q ss_pred HHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHh-hcCeEEEEECCEEEEEeCcccccc
Q 040099 534 IARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSELLE 610 (1236)
Q Consensus 534 iARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~l~~ 610 (1236)
||||++.+|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999999999999998854 789999999999995 599999999999999999888754
No 353
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=370.48 Aligned_cols=215 Identities=28% Similarity=0.433 Sum_probs=181.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC--C---CCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD--P---SSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~--~---~~G~I~idG~di~~--i~~ 1082 (1236)
-|+++||+++|+.+ ++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|++||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQH---HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECCe---eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 48999999999743 58999999999999999999999999999999999997 3 58999999999864 445
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhh-------------chHHHhh--hhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANA-------------NGFISGL--QEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~-------------~~~i~~l--p~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||+|.+|.+|++||+.-.... .+.++.+ .+.+.......+.+||||||||++|||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~lar 168 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLCIAR 168 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHH
Confidence 6788999999999999999999998521111 1111111 111123456777899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...
T Consensus 169 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 248 (259)
T PRK14274 169 ALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFSNPDDQ 248 (259)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhhCCCCH
Confidence 999999999999999999999999999999998778899999999999865 9999999999999999999998754433
Q ss_pred c
Q 040099 1227 Y 1227 (1236)
Q Consensus 1227 y 1227 (1236)
|
T Consensus 249 ~ 249 (259)
T PRK14274 249 R 249 (259)
T ss_pred H
Confidence 3
No 354
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=380.45 Aligned_cols=217 Identities=27% Similarity=0.427 Sum_probs=180.9
Q ss_pred EEEeEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC----CCCcEEEECCeecccCChHHH
Q 040099 1011 VQFLRVSFKYPTRPH-IEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD----PSSGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~----~~~G~I~idG~di~~i~~~~l 1085 (1236)
++++|+++.|+.+.. ..+|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 789999999975321 359999999999999999999999999999999999998 489999999999998887665
Q ss_pred hc----ceEEEcCCCC--CCh-hhHHHHHHHHh-------------hhchHHHhhhhchh---hhhcCCCCCCChhHHHH
Q 040099 1086 RQ----QMGVVSQEPV--LFS-DTIRANIAEMA-------------NANGFISGLQEGYD---TLVGERGVQLSGGQKQR 1142 (1236)
Q Consensus 1086 R~----~i~~V~Qdp~--LF~-gTIreNL~~~a-------------~~~~~i~~lp~Gld---t~vge~G~~LSGGQrQR 1142 (1236)
|+ +|+||||+|. ++. -|+.+|+.+.. .+.++++.+ |++ ........+||||||||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~--gL~~~~~~l~~~p~~LSgGq~QR 161 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQV--GIPDPASRLDVYPHQLSGGMSQR 161 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHC--CCCChHHHHhCCchhCCHHHHHH
Confidence 53 6999999995 343 35665553211 112222222 442 34567788999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 040099 1143 VAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1143 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+. .||+|+||.+|+|+|.|+++++
T Consensus 162 v~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~ 241 (326)
T PRK11022 162 VMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDI 241 (326)
T ss_pred HHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998753 789999999999995 5999999999999999999999
Q ss_pred hhccCcccHH
Q 040099 1220 ISTKNGIYTS 1229 (1236)
Q Consensus 1220 l~~~~g~y~~ 1229 (1236)
++++...|.+
T Consensus 242 ~~~p~hpyt~ 251 (326)
T PRK11022 242 FRAPRHPYTQ 251 (326)
T ss_pred hhCCCChHHH
Confidence 9876656654
No 355
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=370.31 Aligned_cols=209 Identities=34% Similarity=0.547 Sum_probs=180.9
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccC--------
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKL-------- 1080 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i-------- 1080 (1236)
+.++++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+
T Consensus 4 ~~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECCE---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 569999999999743 589999999999999999999999999999999999999999999999998642
Q ss_pred -----ChHHHhcceEEEcCCCCCChh-hHHHHHHHHh----h---------hchHHHhhhhchhhhh-cCCCCCCChhHH
Q 040099 1081 -----QVKWLRQQMGVVSQEPVLFSD-TIRANIAEMA----N---------ANGFISGLQEGYDTLV-GERGVQLSGGQK 1140 (1236)
Q Consensus 1081 -----~~~~lR~~i~~V~Qdp~LF~g-TIreNL~~~a----~---------~~~~i~~lp~Gldt~v-ge~G~~LSGGQr 1140 (1236)
....+|++++||||++.+|.. |++||+.... + +.++++.+ |++... ......||||||
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~G~~ 158 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKV--GIDERAQGKYPVHLSGGQQ 158 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc--CCChhhhhCCcccCCHHHH
Confidence 135678899999999999975 9999985211 1 11222222 454443 566789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 040099 1141 QRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHES 1218 (1236)
Q Consensus 1141 QRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~e 1218 (1236)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 238 (257)
T PRK10619 159 QRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQ 238 (257)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999875 47899999999999986 99999999999999999999
Q ss_pred Hhhc
Q 040099 1219 LIST 1222 (1236)
Q Consensus 1219 Ll~~ 1222 (1236)
+.+.
T Consensus 239 ~~~~ 242 (257)
T PRK10619 239 LFGN 242 (257)
T ss_pred hhhC
Confidence 9765
No 356
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=371.73 Aligned_cols=212 Identities=34% Similarity=0.495 Sum_probs=182.1
Q ss_pred cccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeeccc--C
Q 040099 1008 MGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQK--L 1080 (1236)
Q Consensus 1008 ~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~--i 1080 (1236)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999974 3589999999999999999999999999999999999975 89999999999864 3
Q ss_pred ChHHHhcceEEEcCCCCCChhhHHHHHHHHhhh----------chHHHh-hhh-chh----hhhcCCCCCCChhHHHHHH
Q 040099 1081 QVKWLRQQMGVVSQEPVLFSDTIRANIAEMANA----------NGFISG-LQE-GYD----TLVGERGVQLSGGQKQRVA 1144 (1236)
Q Consensus 1081 ~~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~----------~~~i~~-lp~-Gld----t~vge~G~~LSGGQrQRla 1144 (1236)
+...+|++++|+||+|.+|..|++||+.-.... .+.+.. +.. |++ ......+.+||||||||++
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~ 173 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRLC 173 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHH
Confidence 566789999999999999989999999621111 111111 111 332 3456678899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1145 IARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1145 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 174 laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 252 (267)
T PRK14235 174 IARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKMFTN 252 (267)
T ss_pred HHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988777899999999999965 899999999999999999999865
No 357
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=376.98 Aligned_cols=225 Identities=29% Similarity=0.458 Sum_probs=186.1
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCCC--C
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKEF--Q 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~ 455 (1236)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 35899999999963 359999999999999999999999999999999999864 4999999999998643 3
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCC--CC-CH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HA-TK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
...+|++++||+|++.+|+.|++|||.++.. .. +. +++.++++..++.+.+ .......+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEV-------SDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccch-------hhHhhCChhhCCHHH
Confidence 3457889999999999998899999998632 11 11 2333444444432211 223455667899999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccc
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~ 607 (1236)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999865 99999999999999999999
Q ss_pred ccccccchhh
Q 040099 608 LLENPYGAYN 617 (1236)
Q Consensus 608 l~~~~~~~y~ 617 (1236)
+..++...|.
T Consensus 268 ~~~~~~~~~~ 277 (286)
T PRK14275 268 LFTNPKDRMT 277 (286)
T ss_pred HHhCCCcHHH
Confidence 8765433333
No 358
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-40 Score=359.78 Aligned_cols=201 Identities=32% Similarity=0.543 Sum_probs=172.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +. .|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 478999999963 22 39999999999999999999999999999999999999999999999876654 357899
Q ss_pred EEccCCCCCch-hHHHHHhcCCC-C-----CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKT-H-----ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~-~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|.. |++||+.++.. . ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999875 99999987642 1 12345666676666665555444 4899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
++++|++|||||||++||+++...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998753 7899999999999866 9999999999998754
No 359
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=387.20 Aligned_cols=211 Identities=27% Similarity=0.410 Sum_probs=181.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4889999999974 3589999999999999999999999999999999999999999999999999876653 5789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+||+|++.+|.. |++||+.-.. .+.+.++.+ |++........+||||||||++|||||+++|++|
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lL 155 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVF 155 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999975 9999996211 111222222 4555556667899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 156 LLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 156 LLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 99999999999999999999988753 7899999999998865 99999999999999999999987654433
No 360
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-40 Score=362.44 Aligned_cols=203 Identities=26% Similarity=0.444 Sum_probs=174.7
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGDF---EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECCE---EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 5789999999743 589999999999999999999999999999999999999999999999998653 356788999
Q ss_pred EEcCCCCCChh-hHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFSD-TIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||++.+|.. |++||+.-... +.+.++.+ |++........+||||||||++||||++.+|++||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~lll 154 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLF 154 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999998875 99999952111 11122222 44444555667899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 040099 1158 LDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESL 1219 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eL 1219 (1236)
|||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 155 LDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred EcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999988753 6899999999999875 999999999999999998875
No 361
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-40 Score=367.37 Aligned_cols=206 Identities=23% Similarity=0.429 Sum_probs=181.1
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH-Hhcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW-LRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~-lR~~i 1089 (1236)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999974 35899999999999999999999999999999999999999999999999998877654 35679
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhh--------------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHH
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMAN--------------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~--------------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARA 1148 (1236)
+|+||++.+|.+ |++||+..... +.++++.+ |++.........||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999987 99999963111 11112211 56656667778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
++++|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999975 99999999999999999999875
No 362
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=385.91 Aligned_cols=212 Identities=30% Similarity=0.453 Sum_probs=182.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC----CHHHHh
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF----QLKWIR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r 460 (1236)
|++ |++++|++ + .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+. +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999953 2 23 89999999999999999999999999999999999999999999998653 234467
Q ss_pred cceEEEccCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 461 EKIGLVSQEPVLLS-SSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
++++||+|++.+|+ .|++|||.++......+++.++++..++.++..+ ...+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDR-----------YPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHHHHH
Confidence 89999999999986 5999999997554445566666666665544444 44689999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccccc
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPY 613 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~ 613 (1236)
.+|++||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 99999999999999999999999999998754 6899999999998865 99999999999999999999987653
No 363
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=368.90 Aligned_cols=223 Identities=32% Similarity=0.544 Sum_probs=189.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~~ 456 (1236)
.++++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 469999999999999999999999999999999999864 4899999999998653 45
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCC--C-CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKT--H-ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~-~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..++++++|++|++.+|+.|++||+.++.. . .+. +++.++++.+++.+++.. ..++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHH
Confidence 567889999999999999999999987531 1 112 335556666666555432 23556778999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998876 999999999999999999998
Q ss_pred cccccchh
Q 040099 609 LENPYGAY 616 (1236)
Q Consensus 609 ~~~~~~~y 616 (1236)
...+.+.+
T Consensus 233 ~~~~~~~~ 240 (250)
T PRK14266 233 FINPKDKR 240 (250)
T ss_pred HhCCCChH
Confidence 76544433
No 364
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=371.09 Aligned_cols=221 Identities=24% Similarity=0.433 Sum_probs=185.8
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH-hcc
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI-REK 462 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~ 462 (1236)
-++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999987775544 456
Q ss_pred eEEEccCCCCCch-hHHHHHhcCCCCCC--------------HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChH
Q 040099 463 IGLVSQEPVLLSS-SIRDNIAYGKTHAT--------------KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGG 527 (1236)
Q Consensus 463 i~~v~Q~~~l~~~-ti~~ni~~g~~~~~--------------~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgG 527 (1236)
++|++|++.+|.. |++||+.++..... .++..+. ...+.++++.+ |++......+.+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999985 99999998632100 0000011 11223445555 6666777788899999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeC
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~ 604 (1236)
||||++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998753 7899999999999865 99999999999999999
Q ss_pred ccccccc
Q 040099 605 HSELLEN 611 (1236)
Q Consensus 605 ~~~l~~~ 611 (1236)
.+++...
T Consensus 238 ~~~~~~~ 244 (255)
T PRK11300 238 PEEIRNN 244 (255)
T ss_pred HHHHhhC
Confidence 8887643
No 365
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.5e-40 Score=384.54 Aligned_cols=213 Identities=33% Similarity=0.488 Sum_probs=183.5
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.++++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++..+++. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5899999999974 3589999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhh--------hchHHHh-hh-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMAN--------ANGFISG-LQ-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLL 1158 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~--------~~~~i~~-lp-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlL 1158 (1236)
+||+|++.||.. ||+|||.-... ....+.. +. -|++........+||||||||+||||||+++|++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLL 168 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLL 168 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999965 99999962111 0111111 11 1555556677789999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1159 DEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1159 DEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.++...|
T Consensus 169 DEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 169 DESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred eCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 999999999999999999998764 7899999999999754 99999999999999999999998765444
No 366
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.6e-40 Score=380.34 Aligned_cols=219 Identities=25% Similarity=0.407 Sum_probs=183.4
Q ss_pred cEEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCC---CcEEEECCeecccCChHHH
Q 040099 1010 EVQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPS---SGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~---~G~I~idG~di~~i~~~~l 1085 (1236)
-++++|+++.|+.+. ...+|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+..++...+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996421 246899999999999999999999999999999999999996 9999999999998887765
Q ss_pred h----cceEEEcCCC--CCCh-hhHHHHHHHHhh-------------hchHHH--hhhhchhhhhcCCCCCCChhHHHHH
Q 040099 1086 R----QQMGVVSQEP--VLFS-DTIRANIAEMAN-------------ANGFIS--GLQEGYDTLVGERGVQLSGGQKQRV 1143 (1236)
Q Consensus 1086 R----~~i~~V~Qdp--~LF~-gTIreNL~~~a~-------------~~~~i~--~lp~Gldt~vge~G~~LSGGQrQRl 1143 (1236)
| ++|+|||||| .++. .|+.+|+.+... +.+.++ .++++. ..++..+.+||||||||+
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~-~~~~~~p~~LSgG~~QRv 170 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEAR-KRMKMYPHEFSGGMRQRV 170 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChH-HHhcCCcccCCHHHHHHH
Confidence 3 4799999999 4544 477777642211 111222 123322 235677889999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1144 AIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1144 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
+|||||+.+|++||+|||||+||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||.+|+|+|.|++++++
T Consensus 171 ~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 171 MIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVF 250 (330)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999988754 7899999999999975 9999999999999999999999
Q ss_pred hccCcccHH
Q 040099 1221 STKNGIYTS 1229 (1236)
Q Consensus 1221 ~~~~g~y~~ 1229 (1236)
+++...|.+
T Consensus 251 ~~p~~pyt~ 259 (330)
T PRK09473 251 YQPSHPYSI 259 (330)
T ss_pred hCCCCHHHH
Confidence 876666765
No 367
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-40 Score=360.77 Aligned_cols=197 Identities=29% Similarity=0.515 Sum_probs=171.2
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++||+++|+++ ++|+|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGKK---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECCE---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 5789999999753 5899999999999 99999999999999999999999999999999999998776 67899999
Q ss_pred EEcCCCCCChh-hHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFSD-TIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||+|.+|.+ |++||+.-... +.+.++.+ |++........+||||||||++|||||+++|++||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 153 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELV--NLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILI 153 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC--CCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999986 99999852111 11112211 44433445667899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1158 LDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
|||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 154 VDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999998777999999999999965 9999999999999875
No 368
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2e-40 Score=348.14 Aligned_cols=172 Identities=36% Similarity=0.663 Sum_probs=161.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 246999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 465 LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 465 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
|++|++.+|+.|++||+ ||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhhcCeEEEEECCEE
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRNANIIAVIQQGKI 599 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~ad~i~vl~~G~i 599 (1236)
|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999988754 7899999999999988999999999974
No 369
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-40 Score=370.64 Aligned_cols=212 Identities=31% Similarity=0.484 Sum_probs=181.6
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CC
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQ 1081 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~ 1081 (1236)
..|+++||+++|+.+ ++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~~---~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGTF---EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECCE---EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 359999999999743 58999999999999999999999999999999999997 589999999999863 46
Q ss_pred hHHHhcceEEEcCCCCCChhhHHHHHHHHhhh-------ch----HHHhh--hhchhhhhcCCCCCCChhHHHHHHHHHH
Q 040099 1082 VKWLRQQMGVVSQEPVLFSDTIRANIAEMANA-------NG----FISGL--QEGYDTLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1082 ~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~-------~~----~i~~l--p~Gldt~vge~G~~LSGGQrQRlaLARA 1148 (1236)
...+|++++||||+|.+|..|++||+.-.+.. .+ .++.+ ..+++........+||||||||++||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~lara 168 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIART 168 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHHHH
Confidence 67789999999999999999999999621111 11 12211 1233445666778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeC-----------CEEEEecCh
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQ-----------GMIVEKGSH 1216 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~-----------G~Ive~Gt~ 1216 (1236)
|+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++ |+++|.|++
T Consensus 169 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 169 IAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEEEeCCH
Confidence 99999999999999999999999999999988777899999999999865 999999996 679999999
Q ss_pred hHHhhcc
Q 040099 1217 ESLISTK 1223 (1236)
Q Consensus 1217 ~eLl~~~ 1223 (1236)
+++...+
T Consensus 249 ~~~~~~~ 255 (269)
T PRK14259 249 KKIFNSP 255 (269)
T ss_pred HHHHhCc
Confidence 9998653
No 370
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.6e-40 Score=348.76 Aligned_cols=172 Identities=40% Similarity=0.697 Sum_probs=162.1
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++|++++|+.. ..++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999753 235899999999999999999999999999999999999999999999999999988889999999
Q ss_pred EEcCCCCCChhhHHHHHHHHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHH
Q 040099 1091 VVSQEPVLFSDTIRANIAEMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESE 1170 (1236)
Q Consensus 1091 ~V~Qdp~LF~gTIreNL~~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te 1170 (1236)
|++|+|.+|++|++||+ ||||||||++||||++++|++|||||||++||+.+.
T Consensus 80 ~~~q~~~~~~~tv~~~l---------------------------LS~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~ 132 (173)
T cd03246 80 YLPQDDELFSGSIAENI---------------------------LSGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGE 132 (173)
T ss_pred EECCCCccccCcHHHHC---------------------------cCHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHH
Confidence 99999999999999997 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCeEEEEecCchhhhhcCEEEEEeCCEE
Q 040099 1171 RVVQDALDQVM-VDRTTLVVAHRLSTIKNAHLIAVVSQGMI 1210 (1236)
Q Consensus 1171 ~~I~~~L~~~~-~~~TvI~IaHRl~ti~~aD~I~Vl~~G~I 1210 (1236)
..+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 133 ~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 133 RALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999998875 47899999999999988999999999974
No 371
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3e-40 Score=366.26 Aligned_cols=207 Identities=31% Similarity=0.507 Sum_probs=180.8
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccC--ChHHHhcc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKL--QVKWLRQQ 1088 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i--~~~~lR~~ 1088 (1236)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999974 3589999999999999999999999999999999999999999999999999764 34577889
Q ss_pred eEEEcCCCCCCh-hhHHHHHHHHh-------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEPVLFS-DTIRANIAEMA-------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp~LF~-gTIreNL~~~a-------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
++|+||++.+|. .|++||+.-.. .+.+.++.+ |++.........||||||||++||||++++|+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 156 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARALAVKPK 156 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999999998886 59999985211 011222222 56666677778999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+|||||||++||+++...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 157 LMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999998875 47899999999999965 999999999999999999998765
No 372
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=365.36 Aligned_cols=209 Identities=25% Similarity=0.382 Sum_probs=179.6
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH-Hhcc
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW-LRQQ 1088 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~-lR~~ 1088 (1236)
-|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGKI---QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCCc---eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 48899999999743 5899999999999999999999999999999999999999999999999998887654 6788
Q ss_pred eEEEcCCCCCChh-hHHHHHHHHh----------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1089 MGVVSQEPVLFSD-TIRANIAEMA----------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1089 i~~V~Qdp~LF~g-TIreNL~~~a----------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
++|+||++.+|.+ |++||+.... .+.+.+..++ +++.........||||||||++||||++++|+|||
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ill 160 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLL 160 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999999985 9999995211 1122222232 23333445677899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1158 LDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 161 LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred EcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999998865 4789999999999875 5999999999999999999999753
No 373
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.4e-40 Score=362.59 Aligned_cols=199 Identities=31% Similarity=0.511 Sum_probs=171.1
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH---Hh
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW---LR 1086 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~---lR 1086 (1236)
++++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999997421 135999999999999999999999999999999999999999999999999998877544 34
Q ss_pred -cceEEEcCCCCCCh-hhHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1087 -QQMGVVSQEPVLFS-DTIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1087 -~~i~~V~Qdp~LF~-gTIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
++++||||+|.+|. .|++||+.-.. .+.+++..+ |++.........||||||||++|||||+++
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~ 159 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKV--GLEHRINHRPSELSGGERQRVAIARALVNQ 159 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhCC
Confidence 68999999999985 59999985211 111222222 566666677789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhhcCEEEEEeCCEEE
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKNAHLIAVVSQGMIV 1211 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Iv 1211 (1236)
|+||||||||++||+++...+.+.|+++. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 160 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 160 PSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999875 378999999999999889999999999986
No 374
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=371.57 Aligned_cols=220 Identities=31% Similarity=0.491 Sum_probs=187.5
Q ss_pred CCcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecC----
Q 040099 382 RGDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLK---- 452 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~---- 452 (1236)
.+.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 457999999999963 4699999999999999999999999999999999999975 7999999998774
Q ss_pred CCCHHHHhcceEEEccCCCCCchhHHHHHhcCCC--CC-----CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCC
Q 040099 453 EFQLKWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HA-----TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLS 525 (1236)
Q Consensus 453 ~~~~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LS 525 (1236)
..+...+++.|+|++|++.+|..|++||+.++.. .. .++++.++++.+++.+ ++.+..+.....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCC
Confidence 2344567889999999999999999999987531 11 1234555555555433 23344566678999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeC
Q 040099 526 GGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 526 gGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~ 604 (1236)
||||||++|||||+++|+++||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999999865 99999999999999999
Q ss_pred ccccccc
Q 040099 605 HSELLEN 611 (1236)
Q Consensus 605 ~~~l~~~ 611 (1236)
++++..+
T Consensus 244 ~~~~~~~ 250 (265)
T PRK14252 244 TDTIFIK 250 (265)
T ss_pred HHHHHhC
Confidence 9988754
No 375
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-40 Score=366.49 Aligned_cols=211 Identities=36% Similarity=0.543 Sum_probs=181.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.+.. ++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~--~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPH--KRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChh--hcceE
Confidence 478999999963 4699999999999999999999999999999999999999999999999998766542 67899
Q ss_pred EEccCCCCCch-hHHHHHhcCCC--CCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKT--HAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
||+|++.+|.+ |++||+.++.. ..+ ++++.++++..++.+++.+. ..+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRK-----------PSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999865 99999987521 111 23445555555555554444 45899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
++.+|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998864 7899999999999865 999999999999999998887654
No 376
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-40 Score=388.20 Aligned_cols=229 Identities=31% Similarity=0.485 Sum_probs=191.1
Q ss_pred CcEEEEeEEEECCCC--------CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCee--cC
Q 040099 383 GDIELKDVNFSYPAR--------PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVN--LK 452 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~--------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~--~~ 452 (1236)
.-++++|++++|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.| ++
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 358899999999742 12468999999999999999999999999999999999999999999999987 23
Q ss_pred CCCHHHHhcceEEEccCCC--CC-chhHHHHHhcCCC---CC----CHHHHHHHHHHhccHHHHHhCCCCccccccCCCC
Q 040099 453 EFQLKWIREKIGLVSQEPV--LL-SSSIRDNIAYGKT---HA----TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGI 522 (1236)
Q Consensus 453 ~~~~~~~r~~i~~v~Q~~~--l~-~~ti~~ni~~g~~---~~----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~ 522 (1236)
.-+....|+++-+|+|||+ |- ..||.++|.-... .. ..+.+.+.++..++.+- .....+.
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~----------~l~ryP~ 428 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPE----------FLDRYPH 428 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHH----------HHhcCch
Confidence 2334567889999999996 33 3599999875321 11 11235555666655531 2344456
Q ss_pred CCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEE
Q 040099 523 QLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKI 599 (1236)
Q Consensus 523 ~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i 599 (1236)
+||||||||+||||||+.+|+++|+|||||+||+.+.+.|.+.|+++.+ |-|.++|||+++.++. ||||+||++|+|
T Consensus 429 elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~i 508 (539)
T COG1123 429 ELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRI 508 (539)
T ss_pred hcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeE
Confidence 9999999999999999999999999999999999999999999999864 6899999999999987 999999999999
Q ss_pred EEEeCcccccccccchhhhhHH
Q 040099 600 VEKGTHSELLENPYGAYNRLIR 621 (1236)
Q Consensus 600 ~~~g~~~~l~~~~~~~y~~~~~ 621 (1236)
||.|+.+++.+.+...|.+...
T Consensus 509 VE~G~~~~v~~~p~h~Ytr~L~ 530 (539)
T COG1123 509 VEEGPTEKVFENPQHPYTRKLL 530 (539)
T ss_pred EEeCCHHHHhcCCCChHHHHHH
Confidence 9999999999998888887653
No 377
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=366.86 Aligned_cols=208 Identities=30% Similarity=0.516 Sum_probs=180.1
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecc------cCChH
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQ------KLQVK 1083 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~------~i~~~ 1083 (1236)
.++++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. ..+..
T Consensus 2 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGAH---QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECCe---eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 37899999999743 5999999999999999999999999999999999999999999999999873 12345
Q ss_pred HHhcceEEEcCCCCCChh-hHHHHHHHH-h------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPVLFSD-TIRANIAEM-A------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAI 1149 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~g-TIreNL~~~-a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARAL 1149 (1236)
.+|++++|+||+|.+|.+ |++||+... . .+.+++..+ |++........+||||||||++||||+
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral 156 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAIARAL 156 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 678899999999999975 999999521 1 111222222 566666777889999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1150 VKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1150 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 157 ~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 231 (242)
T PRK11124 157 MMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQP 231 (242)
T ss_pred hcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcCc
Confidence 99999999999999999999999999999875 47899999999999965 999999999999999999998654
No 378
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=367.36 Aligned_cols=212 Identities=32% Similarity=0.487 Sum_probs=181.4
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeeccc--CC
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQK--LQ 1081 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~--i~ 1081 (1236)
|.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+ .+
T Consensus 2 ~~l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGDF---QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 568999999999743 589999999999999999999999999999999999863 69999999999874 45
Q ss_pred hHHHhcceEEEcCCCCCChhhHHHHHHHHhhh---------chHHHh----h--hhchhhhhcCCCCCCChhHHHHHHHH
Q 040099 1082 VKWLRQQMGVVSQEPVLFSDTIRANIAEMANA---------NGFISG----L--QEGYDTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1082 ~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~---------~~~i~~----l--p~Gldt~vge~G~~LSGGQrQRlaLA 1146 (1236)
...+|++++|+||+|.+|+.|++||+...... .+.+.. + .+++.........+||||||||++||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIA 158 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHH
Confidence 56789999999999999999999999622111 111111 1 11223345667789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
|||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 159 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 236 (250)
T PRK14240 159 RALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFTNP 236 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 9999999999999999999999999999999988778899999999998865 9999999999999999999997653
No 379
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.5e-40 Score=362.05 Aligned_cols=205 Identities=34% Similarity=0.575 Sum_probs=171.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC--CCHHHHhcc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE--FQLKWIREK 462 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~--~~~~~~r~~ 462 (1236)
++++||+++|++ +++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999963 469999999999999999999999999999999999999999999999999853 344567889
Q ss_pred eEEEccCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 040099 463 IGLVSQEPVLLS-SSIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAM 538 (1236)
Q Consensus 463 i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal 538 (1236)
++|++|++.+|. .|++||+.++.. ..+.++..+. +.+.+..+ |++........+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEER-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHH-----HHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999886 599999987532 1222221111 12233333 444445556679999999999999999
Q ss_pred cCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-CceEEEEecCchhHhh-cCeEEEEECCEE
Q 040099 539 IKDPRILLLDEATSALDSESGRMVQEALDRVMI-NRTTVIVSHRLSLIRN-ANIIAVIQQGKI 599 (1236)
Q Consensus 539 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~~~~~~~-ad~i~vl~~G~i 599 (1236)
+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998854 7899999999999965 999999999974
No 380
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=370.43 Aligned_cols=223 Identities=30% Similarity=0.484 Sum_probs=183.5
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ-----AGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~~ 456 (1236)
-++++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999963 46999999999999999999999999999999999999875 8999999999864 334
Q ss_pred HHHhcceEEEccCCCCCch-hHHHHHhcCCC--CC-CHHHHHHH----HHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 457 KWIREKIGLVSQEPVLLSS-SIRDNIAYGKT--HA-TKEEIQAA----AEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~-~~~~~~~~----~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
..+|+.++|++|++.+|.. |+.||+.++.. .. .+++..+. ++..++.+. +.......+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE-------VKDRLKTPATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh-------hhhhhcCCcccCCHHH
Confidence 5678889999999998875 99999987532 11 22332222 222222221 1122334567899999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccc
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~ 607 (1236)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999875 99999999999999999999
Q ss_pred ccccccchh
Q 040099 608 LLENPYGAY 616 (1236)
Q Consensus 608 l~~~~~~~y 616 (1236)
++..+...+
T Consensus 234 ~~~~~~~~~ 242 (252)
T PRK14272 234 LFTNPRDER 242 (252)
T ss_pred HHhCcCcHH
Confidence 876543333
No 381
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-40 Score=374.70 Aligned_cols=215 Identities=28% Similarity=0.435 Sum_probs=179.8
Q ss_pred cccEEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc----C-
Q 040099 1008 MGEVQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK----L- 1080 (1236)
Q Consensus 1008 ~g~I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~----i- 1080 (1236)
.+.|+++|++++|+.++ ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999997542 1359999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHHHhcceEEEcCCC--CCChhhHHHHHHHHh---hh-----chHHHhhhh--chh-hhhcCCCCCCChhHHHHHHHHH
Q 040099 1081 QVKWLRQQMGVVSQEP--VLFSDTIRANIAEMA---NA-----NGFISGLQE--GYD-TLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1081 ~~~~lR~~i~~V~Qdp--~LF~gTIreNL~~~a---~~-----~~~i~~lp~--Gld-t~vge~G~~LSGGQrQRlaLAR 1147 (1236)
+...+|++++|+||+| .+|..|++||+.-.. +. .+.+..+-+ |+. ........+||||||||++|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lar 163 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAG 163 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHH
Confidence 4567888999999998 478889999995211 00 011111111 332 2345667899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 164 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 241 (289)
T PRK13645 164 IIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIFSN 241 (289)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998753 789999999999885 4999999999999999999998654
No 382
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=372.85 Aligned_cols=219 Identities=33% Similarity=0.533 Sum_probs=184.8
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCC--CC
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKE--FQ 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 455 (1236)
..|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.+ .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35899999999963 469999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCCC--C---CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHH
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH--A---TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQ 530 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~--~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkq 530 (1236)
...++++++||+|++.+|+.|++||+.++... . ..+++.++++..++...+ ....+.++.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-------KDQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-------HHHHhCCcccCCHHHHH
Confidence 55678899999999999988999999875211 1 123455555555443222 12345667799999999
Q ss_pred HHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEE-EEECCEEEEEeCcccc
Q 040099 531 RVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIA-VIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 531 RiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~-vl~~G~i~~~g~~~~l 608 (1236)
|++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999875 99975 5799999999999888
Q ss_pred ccc
Q 040099 609 LEN 611 (1236)
Q Consensus 609 ~~~ 611 (1236)
..+
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 654
No 383
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3e-40 Score=370.06 Aligned_cols=225 Identities=27% Similarity=0.443 Sum_probs=185.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCee-----cCCCCHHH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVN-----LKEFQLKW 458 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~-----~~~~~~~~ 458 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 469999999999999999999999999999999999999999999999998 77665543
Q ss_pred ----HhcceEEEccCCC--CCc-hhHHHHHhcCC---CCCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChH
Q 040099 459 ----IREKIGLVSQEPV--LLS-SSIRDNIAYGK---THATKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGG 527 (1236)
Q Consensus 459 ----~r~~i~~v~Q~~~--l~~-~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgG 527 (1236)
+++.++||+|++. ++. .|+.+|+.+.. .....++..+ .+++++..+ |++ +..+..+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 343 48899986521 1111122211 134555665 443 4567788899999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeC
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~ 604 (1236)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988753 7899999999999975 99999999999999999
Q ss_pred cccccccccchhhh
Q 040099 605 HSELLENPYGAYNR 618 (1236)
Q Consensus 605 ~~~l~~~~~~~y~~ 618 (1236)
++++..++...|.+
T Consensus 236 ~~~~~~~~~~~~~~ 249 (258)
T PRK11701 236 TDQVLDDPQHPYTQ 249 (258)
T ss_pred HHHHhcCCCCHHHH
Confidence 99987654344443
No 384
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=370.70 Aligned_cols=218 Identities=33% Similarity=0.499 Sum_probs=183.1
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 456 (1236)
.++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 4699999999999999999999999999999999999974 79999999999853 345
Q ss_pred HHHhcceEEEccCCCCCc-hhHHHHHhcCCCC---CCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 457 KWIREKIGLVSQEPVLLS-SSIRDNIAYGKTH---ATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~-~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
..+|+.++|++|++.+|. .|++||+.++... .+. +++.++++..++.+++ .........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHH
Confidence 567889999999999887 5999999875311 111 2334444444443222 233455667899999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHh-hcCeEEEEE------CCEEEE
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIR-NANIIAVIQ------QGKIVE 601 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~ad~i~vl~------~G~i~~ 601 (1236)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+. .||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999999999999877789999999999986 599999997 899999
Q ss_pred EeCccccccc
Q 040099 602 KGTHSELLEN 611 (1236)
Q Consensus 602 ~g~~~~l~~~ 611 (1236)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998754
No 385
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=360.60 Aligned_cols=205 Identities=27% Similarity=0.491 Sum_probs=171.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 469999999999999999999999999999999999999999999999988753 4577899
Q ss_pred EEccCCCCCch-hHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
|++|++.++.. |++||+.++.. .....+..+ .+.+++..+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARR-----RIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHH-----HHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999987421 111111111 122334444 455455566678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
|+++||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998875 47899999999999865 9999999999998754
No 386
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=366.66 Aligned_cols=207 Identities=25% Similarity=0.441 Sum_probs=180.4
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH-Hhcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW-LRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~-lR~~i 1089 (1236)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 4 l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 4 LTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred EEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 789999999974 35999999999999999999999999999999999999999999999999998877544 57889
Q ss_pred EEEcCCCCCChh-hHHHHHHHHh-------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMA-------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a-------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
+|+||++.+|.. |++||+.-.. .+.++++.+ |++.........||||||||++||||++++|++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALAANPKF 158 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999998875 9999985211 112223322 566666677789999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||||++||+.+...+.+.++++. +++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 159 ILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999998765 47899999999987754 999999999999999999998753
No 387
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-40 Score=370.13 Aligned_cols=211 Identities=27% Similarity=0.418 Sum_probs=182.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~~ 1082 (1236)
-++++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGED---HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECCc---ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 48999999999743 58999999999999999999999999999999999987 699999999999853 455
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHh---hh------chHHHhhh------hchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMA---NA------NGFISGLQ------EGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a---~~------~~~i~~lp------~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||+|.+|..|++||+.... +. ...+...- +++.......+..||||||||++|||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~lar 180 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLCIAR 180 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHHHHH
Confidence 67889999999999999999999996211 11 11111111 23445566788899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 181 aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 257 (271)
T PRK14238 181 CLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFSNP 257 (271)
T ss_pred HHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCC
Confidence 999999999999999999999999999999998778999999999999865 9999999999999999999998653
No 388
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-40 Score=373.46 Aligned_cols=212 Identities=31% Similarity=0.506 Sum_probs=179.8
Q ss_pred EEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccC----ChHH
Q 040099 1011 VQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKL----QVKW 1084 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i----~~~~ 1084 (1236)
|+++||+++|+++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997431 13599999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcceEEEcCCC--CCChhhHHHHHHHHh---hh-----chHHHh-hh-hchh-hhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1085 LRQQMGVVSQEP--VLFSDTIRANIAEMA---NA-----NGFISG-LQ-EGYD-TLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1085 lR~~i~~V~Qdp--~LF~gTIreNL~~~a---~~-----~~~i~~-lp-~Gld-t~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
+|++|+|+||+| .+|+.|++||+.-.. +. ...+.. +. -|++ ........+||||||||++|||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~ 162 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILAM 162 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 889999999998 688899999995211 11 011111 11 1554 24566778999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 163 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 163 EPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999875 37899999999999865 999999999999999999998764
No 389
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=367.90 Aligned_cols=214 Identities=29% Similarity=0.404 Sum_probs=182.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecccCChHH
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQKLQVKW 1084 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~i~~~~ 1084 (1236)
.++++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQV---EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECCe---eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 48899999999743 589999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcceEEEcCCCCCC-hhhHHHHHHHHhhh--------------chHHHhhhhch----hhhhcCCCCCCChhHHHHHHH
Q 040099 1085 LRQQMGVVSQEPVLF-SDTIRANIAEMANA--------------NGFISGLQEGY----DTLVGERGVQLSGGQKQRVAI 1145 (1236)
Q Consensus 1085 lR~~i~~V~Qdp~LF-~gTIreNL~~~a~~--------------~~~i~~lp~Gl----dt~vge~G~~LSGGQrQRlaL 1145 (1236)
+|++++|+||+|.+| +.|++||+.-.... .+.++.+ |+ +........+||||||||++|
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~qrv~l 157 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKA--QLWDEVKDRLDAPAGKLSGGQQQRLCI 157 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHc--CCCcchhhhhcCCcccCCHHHHHHHHH
Confidence 999999999999755 67999999521110 1111111 22 233456678899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhccC
Q 040099 1146 ARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1146 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~~~ 1224 (1236)
||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++.+.+.
T Consensus 158 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 237 (250)
T PRK14247 158 ARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTNPR 237 (250)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcCCc
Confidence 9999999999999999999999999999999999877899999999999985 599999999999999999999987544
Q ss_pred cccH
Q 040099 1225 GIYT 1228 (1236)
Q Consensus 1225 g~y~ 1228 (1236)
..+.
T Consensus 238 ~~~~ 241 (250)
T PRK14247 238 HELT 241 (250)
T ss_pred cHHH
Confidence 3343
No 390
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-40 Score=367.45 Aligned_cols=211 Identities=30% Similarity=0.440 Sum_probs=179.5
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC--C---CCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD--P---SSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~--~---~~G~I~idG~di~~i--~~ 1082 (1236)
-++++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~~---~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNKK---KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECCe---eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 48999999999743 58999999999999999999999999999999999954 6 499999999998643 34
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHh---hh------ch----HHHhh--hhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMA---NA------NG----FISGL--QEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a---~~------~~----~i~~l--p~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|+.++||||+|.+|+.|++||+.-.. +. .+ ..+.+ ..++.+..+....+||||||||++|||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lar 161 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIAR 161 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHHH
Confidence 57788999999999999999999995211 11 01 11111 111234456777899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 162 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 238 (252)
T PRK14239 162 VLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFMNP 238 (252)
T ss_pred HHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 999999999999999999999999999999988767899999999998865 9999999999999999999998753
No 391
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=368.94 Aligned_cols=219 Identities=32% Similarity=0.449 Sum_probs=188.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCCC--CH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKEF--QL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~ 456 (1236)
.+.+++.+++|. +.++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 8 ~~~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 488999999995 24699999999999999999999999999999999999987 799999999998643 34
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCC-----CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTH-----ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
..+++.|+|++|++.+|..|++|||.++... ...+++.++++.+++.+.+.. ..++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 4677889999999999999999999986321 112456666776666544322 2346677999999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEE--------CCEEEEE
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQ--------QGKIVEK 602 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~--------~G~i~~~ 602 (1236)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778899999999998865 99999996 8999999
Q ss_pred eCcccccccc
Q 040099 603 GTHSELLENP 612 (1236)
Q Consensus 603 g~~~~l~~~~ 612 (1236)
|+++++++++
T Consensus 238 g~~~~~~~~~ 247 (261)
T PRK14263 238 GPTAQIFQNP 247 (261)
T ss_pred CCHHHHHhCC
Confidence 9999987653
No 392
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4e-40 Score=370.30 Aligned_cols=227 Identities=23% Similarity=0.422 Sum_probs=185.5
Q ss_pred cEEEEeEEEECCCC------CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH
Q 040099 384 DIELKDVNFSYPAR------PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK 457 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~ 457 (1236)
-|+++||+++|+.. +++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765555
Q ss_pred HHhcceEEEccCCC--CCc-hhHHHHHhcCCC---CCC----HHHHHHHHHHhccH-HHHHhCCCCccccccCCCCCCCh
Q 040099 458 WIREKIGLVSQEPV--LLS-SSIRDNIAYGKT---HAT----KEEIQAAAEAANAS-HFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 458 ~~r~~i~~v~Q~~~--l~~-~ti~~ni~~g~~---~~~----~~~~~~~~~~~~~~-~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
..+++++||+|++. +++ .|+.+|+.++.. ... .+++.++++..++. +.. .....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-----------SYYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-----------hcCchhcCH
Confidence 66678999999985 444 389999875311 111 23455556665552 222 233458999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
|||||++|||||+.+|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998853 7899999999999976 9999999999999999
Q ss_pred Cccccccccc-chhhhhHH
Q 040099 604 THSELLENPY-GAYNRLIR 621 (1236)
Q Consensus 604 ~~~~l~~~~~-~~y~~~~~ 621 (1236)
+++++...+. ..+++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 233 STADVLASPLHELTKRLIA 251 (267)
T ss_pred CHHHHhcCCCCHHHHHHHH
Confidence 9999876532 33444543
No 393
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=371.38 Aligned_cols=208 Identities=30% Similarity=0.489 Sum_probs=181.3
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999643 25899999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEcCCC--CCChhhHHHHHHHHh---h---------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1091 VVSQEP--VLFSDTIRANIAEMA---N---------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1091 ~V~Qdp--~LF~gTIreNL~~~a---~---------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
||||+| .+|+.|++||+.-.. + +.+++..+ |+..........||||||||++|||||+.+|++|
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~ll 159 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVL 159 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999998 478889999995111 1 11112211 4444456667899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999998754 789999999999995 5999999999999999999999764
No 394
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.7e-40 Score=363.44 Aligned_cols=211 Identities=34% Similarity=0.515 Sum_probs=179.9
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCCCCCch-hHHHHHhcCCCC--CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKTH--AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|++ |++||+.++... .+ .+++.++++..++.+ .......+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEG-----------LGDRYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHh-----------HhhCChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999876431 11 122333444443333 3344456899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
++++|+++||||||++||++++..+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998754 7899999999999865 999999999999999999998754
No 395
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=366.60 Aligned_cols=212 Identities=29% Similarity=0.433 Sum_probs=179.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~~ 1082 (1236)
.|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~~---~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGNY---EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECCe---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 48899999999743 58999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhhc---------hHHHhh-h-hch----hhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANAN---------GFISGL-Q-EGY----DTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~---------~~i~~l-p-~Gl----dt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|+.++|++|++.+|+.|++||+.-..... ..+..+ . -|+ .........+||||||||++|||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~lar 160 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIAR 160 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHHH
Confidence 67788999999999999999999995211110 011111 0 023 12345667899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccC
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~ 1224 (1236)
|++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 161 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 238 (251)
T PRK14251 161 ALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIAPK 238 (251)
T ss_pred HHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 999999999999999999999999999999988777899999999999865 99999999999999999999976533
No 396
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-40 Score=372.24 Aligned_cols=211 Identities=29% Similarity=0.503 Sum_probs=179.6
Q ss_pred cEEEeEEEEECCCCC--CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccC----ChH
Q 040099 1010 EVQFLRVSFKYPTRP--HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKL----QVK 1083 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~--~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i----~~~ 1083 (1236)
.|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997321 13599999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcceEEEcCCC--CCChhhHHHHHHHHh------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEP--VLFSDTIRANIAEMA------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp--~LF~gTIreNL~~~a------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARA 1148 (1236)
..|+.++|+||+| .+|..|++||+.-.. .+.+++..+ |++ .........||||||||++||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl~lara 159 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKV--GLSEDLISKSPFELSGGQMRRVAIAGV 159 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCChhHhhCCcccCCHHHHHHHHHHHH
Confidence 6788999999998 588889999995111 111122221 554 24466778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|+.+|++|||||||++||+.+...+.+.|+++. ++.|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 160 l~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13641 160 MAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFSD 235 (287)
T ss_pred HHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999875 4789999999999986 5999999999999999999998764
No 397
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-40 Score=362.18 Aligned_cols=209 Identities=33% Similarity=0.508 Sum_probs=180.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++||+++|++ . ..|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 689999999963 2 2399999999999999999999999999999999999999999999998765442 56899
Q ss_pred EEccCCCCCch-hHHHHHhcCC-CC-----CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGK-TH-----ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~-~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|.+ |+.||+.++. +. ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999875 9999998753 11 11344666777777666655554 4899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
++++|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999865 999999999999999999888754
No 398
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-40 Score=373.12 Aligned_cols=214 Identities=32% Similarity=0.538 Sum_probs=185.9
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcce
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKI 463 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 463 (1236)
.++++|++++|+. ++.+|+||||+|++||++|++||||||||||+|+|+|+..|++|+|.++|.+...- ....|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999962 35799999999999999999999999999999999999999999999999998655 66788899
Q ss_pred EEEccCCCCCch-hHHHHHhcCC-----CC-CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGK-----TH-ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIAR 536 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~-----~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiAR 536 (1236)
||+||+|.+++. |++||+.|.. +. ..++++.+.++..++.+. ...+...||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDK-----------ANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchh-----------hCcchhhcCHHHHHHHHHHH
Confidence 999999998865 9999998742 21 124566777776665441 13445689999999999999
Q ss_pred HhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc-C-ceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 537 AMIKDPRILLLDEATSALDSESGRMVQEALDRVMI-N-RTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 537 al~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
||+.+|++|||||||++|||.+...+.+.|+++.+ + +|++++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999875 4 699999999999987 999999999999999998887543
No 399
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.3e-40 Score=384.40 Aligned_cols=210 Identities=21% Similarity=0.407 Sum_probs=182.0
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|+++
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4889999999974 3599999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC-ChhhHHHHHHHHh-----hh-------chHHHhh-h-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1090 GVVSQEPVL-FSDTIRANIAEMA-----NA-------NGFISGL-Q-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1090 ~~V~Qdp~L-F~gTIreNL~~~a-----~~-------~~~i~~l-p-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
++|||++.+ |+.|++||+.-.. .. .+.+..+ . -|+.........+||||||||++|||||+++|+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P~ 159 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQATP 159 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 999999987 6789999985110 00 0111111 1 144444456677899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||||||||++||+.+...+.+.|+++. +++|+|+++|+++.+. .||||++|++|++++.|++++++..
T Consensus 160 iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 160 VLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 999999999999999999999999875 4789999999999995 5999999999999999999998754
No 400
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-40 Score=368.92 Aligned_cols=219 Identities=32% Similarity=0.459 Sum_probs=186.3
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP-----QAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~ 456 (1236)
-|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 6999999999963 4699999999999999999999999999999999999863 69999999999864 334
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCCCC-----CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKTHA-----TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
..+|++|+|++|++.+|+.|+.||+.++.... .++++.++++.+++.+++. ......+..||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVK-------DKLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhH-------HHhcCCcccCCHHHHHH
Confidence 56788999999999999889999998863211 1233445555555543332 23445667899999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEE---------CCEEEE
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQ---------QGKIVE 601 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~---------~G~i~~ 601 (1236)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998778899999999999865 99999998 899999
Q ss_pred EeCcccccccc
Q 040099 602 KGTHSELLENP 612 (1236)
Q Consensus 602 ~g~~~~l~~~~ 612 (1236)
.|+.+++...+
T Consensus 250 ~g~~~~~~~~~ 260 (274)
T PRK14265 250 FSPTEQMFGSP 260 (274)
T ss_pred eCCHHHHHhCC
Confidence 99999987653
No 401
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-40 Score=369.17 Aligned_cols=212 Identities=31% Similarity=0.489 Sum_probs=182.2
Q ss_pred cccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeeccc--C
Q 040099 1008 MGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQK--L 1080 (1236)
Q Consensus 1008 ~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~--i 1080 (1236)
.+.++++||+++|+++ ++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~~---~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGDK---QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECCe---eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 4569999999999743 589999999999999999999999999999999999984 89999999999865 3
Q ss_pred ChHHHhcceEEEcCCCCCChhhHHHHHHHHhhhc---------hHHHh------hhhchhhhhcCCCCCCChhHHHHHHH
Q 040099 1081 QVKWLRQQMGVVSQEPVLFSDTIRANIAEMANAN---------GFISG------LQEGYDTLVGERGVQLSGGQKQRVAI 1145 (1236)
Q Consensus 1081 ~~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~---------~~i~~------lp~Gldt~vge~G~~LSGGQrQRlaL 1145 (1236)
+...+|++++|+||++.+|+.|++||+.-..... +.+.. +++.+.+..+..+..||||||||++|
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 179 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLVI 179 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHHH
Confidence 4567899999999999999999999995221110 11111 11112245667788999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1146 ARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1146 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 180 aral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 257 (272)
T PRK14236 180 ARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLFTS 257 (272)
T ss_pred HHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHhcC
Confidence 99999999999999999999999999999999998778899999999999865 999999999999999999999865
No 402
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=365.97 Aligned_cols=212 Identities=30% Similarity=0.460 Sum_probs=180.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcc---cCC--CCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRF---YDP--SSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~---~~~--~~G~I~idG~di~~i--~~ 1082 (1236)
.++++|++++|++ .++|+|+||+|++||.+||+||||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4789999999974 3589999999999999999999999999999999997 454 589999999998754 35
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhh-------------hchHHHhh--hhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMAN-------------ANGFISGL--QEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~-------------~~~~i~~l--p~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++||||+|.+|..|++||+..... +.+.++.+ ++.+++.....+.+||||||||++|||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lar 159 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIAR 159 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHH
Confidence 678899999999999999999999952111 01111111 111234456778899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccC
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~ 1224 (1236)
||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 160 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~~~ 237 (250)
T PRK14245 160 AMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTNPE 237 (250)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcCCC
Confidence 999999999999999999999999999999998778999999999999855 99999999999999999999987543
No 403
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-40 Score=369.59 Aligned_cols=208 Identities=28% Similarity=0.503 Sum_probs=181.2
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC-hHHHhcce
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ-VKWLRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~-~~~lR~~i 1089 (1236)
++++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPDG--TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCCC--CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 6899999999642 35999999999999999999999999999999999999999999999999998765 46788899
Q ss_pred EEEcCCCC--CChhhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1090 GVVSQEPV--LFSDTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1090 ~~V~Qdp~--LF~gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
+|+||+|. +++.|++|||.-... +.+.++.+ |++.........||||||||++|||||+.+|+|
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILTMEPEC 157 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 99999985 677899999952111 11122221 566666677889999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 158 llLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 158 LIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999998865 47899999999999988999999999999999999998764
No 404
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=368.83 Aligned_cols=220 Identities=30% Similarity=0.528 Sum_probs=186.4
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----CcEEEECCeecCC--CC
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ-----AGEVLIDGVNLKE--FQ 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~--~~ 455 (1236)
+.|+++|++|+|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 36999999999963 35999999999999999999999999999999999999985 8999999998753 34
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCCC---CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKTH---AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~---~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
...+|+.++|++|++.+|+.|++||+.++... .+ .+++.++++..++.+++. ...++.+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIK-------HKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHH
Confidence 45678899999999999999999999875211 01 223445555555544332 23456677999999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEEC-----CEEE
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQQ-----GKIV 600 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~~-----G~i~ 600 (1236)
|||++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999864 47999999999999865 999999999 9999
Q ss_pred EEeCcccccccc
Q 040099 601 EKGTHSELLENP 612 (1236)
Q Consensus 601 ~~g~~~~l~~~~ 612 (1236)
+.|+++++...+
T Consensus 236 ~~~~~~~~~~~~ 247 (261)
T PRK14258 236 EFGLTKKIFNSP 247 (261)
T ss_pred EeCCHHHHHhCC
Confidence 999999987654
No 405
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.8e-40 Score=358.39 Aligned_cols=197 Identities=27% Similarity=0.458 Sum_probs=170.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++||+++|++ .++|+|+||++++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+. ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999964 3599999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEcCCCCCC-hhhHHHHHHHHhh--------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecC
Q 040099 1091 VVSQEPVLF-SDTIRANIAEMAN--------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEA 1161 (1236)
Q Consensus 1091 ~V~Qdp~LF-~gTIreNL~~~a~--------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEa 1161 (1236)
||||++.+| +.|++||+.-... +.+.++.+ |++.........||||||||++||||++++|++||||||
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP 153 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVV--GLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEP 153 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHc--CCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 999999888 4799999852211 12222222 455555666778999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1162 TSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1162 TSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
|++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 154 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 154 TNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999998865 47899999999999965 9999999999999875
No 406
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=5.8e-40 Score=357.00 Aligned_cols=202 Identities=34% Similarity=0.543 Sum_probs=174.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++||+++|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.+.+ .+++.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999951 568999999999999999999999999999999999999999999999987543 3577899
Q ss_pred EEccCCCCCch-hHHHHHhcCC-CC-----CCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGK-TH-----ATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~-~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
||+|++.+|.. |++||+.++. +. ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999875 9999998642 11 12345566667666665555554 4899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeC
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~ 604 (1236)
++.+|+++||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999865 99999999999998874
No 407
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.1e-40 Score=375.81 Aligned_cols=207 Identities=28% Similarity=0.462 Sum_probs=177.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999974 3589999999999999999999999999999999999999999999999998754 35678999
Q ss_pred EEEcCCCCCCh-hhHHHHHHHHhhh------------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFS-DTIRANIAEMANA------------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~-gTIreNL~~~a~~------------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+|+||++.+|. .|++||+.-.+.. .++++. -|++.........||||||||++|||||+.+|++|
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~--~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~ll 157 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEF--ARLESKADVRVALLSGGMKRRLTLARALINDPQLL 157 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHH--CCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999885 6999999521111 111111 13333344555689999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 158 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999874 47899999999999965 999999999999999999999764
No 408
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.8e-40 Score=368.03 Aligned_cols=211 Identities=27% Similarity=0.410 Sum_probs=178.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC---CcEEEECCeecCCC-----C
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ---AGEVLIDGVNLKEF-----Q 455 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~~~g~~~~~~-----~ 455 (1236)
-|+++||+++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 46999999999999999999999999999999999999986 49999999988643 2
Q ss_pred HHHHhcceEEEccCCCCCc-hhHHHHHhcCCCCC-----------C---HHHHHHHHHHhccHHHHHhCCCCccccccCC
Q 040099 456 LKWIREKIGLVSQEPVLLS-SSIRDNIAYGKTHA-----------T---KEEIQAAAEAANASHFIKNLPQGLDTNVGEH 520 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~g~~~~-----------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~ 520 (1236)
...++++++|++|++.+|. .|++||+.++.... . .+++.++++..+ ++......
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVG-----------MVHFAHQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcC-----------CHHHHhCC
Confidence 3456788999999998887 49999998764211 1 122334444443 33334455
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECC
Q 040099 521 GIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQG 597 (1236)
Q Consensus 521 g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G 597 (1236)
..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 668999999999999999999999999999999999999999999998853 789999999999875 59999999999
Q ss_pred EEEEEeCcccc
Q 040099 598 KIVEKGTHSEL 608 (1236)
Q Consensus 598 ~i~~~g~~~~l 608 (1236)
++++.|+++++
T Consensus 230 ~i~~~g~~~~~ 240 (262)
T PRK09984 230 HVFYDGSSQQF 240 (262)
T ss_pred EEEEeCCHHHh
Confidence 99999999886
No 409
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-40 Score=365.32 Aligned_cols=218 Identities=28% Similarity=0.463 Sum_probs=182.8
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~i--~~ 1082 (1236)
-|+++||+++|+++ ++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~~---~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGEK---KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCCc---eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 38899999999743 589999999999999999999999999999999999984 899999999998653 34
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhhc---------hHHHh-hh-hch----hhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANAN---------GFISG-LQ-EGY----DTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~---------~~i~~-lp-~Gl----dt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||+|.+|..|++||+....... +.+.. +. -|+ +...+....+||||||||++|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la~ 159 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIAR 159 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHHH
Confidence 56788999999999999999999996222111 11111 11 022 23456777899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+++...
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 239 (250)
T PRK14262 160 ALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVERPKNK 239 (250)
T ss_pred HHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCCCCh
Confidence 999999999999999999999999999999988778999999999998755 9999999999999999999998753333
Q ss_pred cHHh
Q 040099 1227 YTSL 1230 (1236)
Q Consensus 1227 y~~L 1230 (1236)
|.+.
T Consensus 240 ~~~~ 243 (250)
T PRK14262 240 LTEE 243 (250)
T ss_pred HHHH
Confidence 4443
No 410
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=382.96 Aligned_cols=199 Identities=33% Similarity=0.495 Sum_probs=171.9
Q ss_pred ccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH----hcceEEEcCCCCCCh-h
Q 040099 1027 EVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL----RQQMGVVSQEPVLFS-D 1101 (1236)
Q Consensus 1027 ~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l----R~~i~~V~Qdp~LF~-g 1101 (1236)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|++||.|+.+.+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876554 468999999999997 4
Q ss_pred hHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHH
Q 040099 1102 TIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIES 1169 (1236)
Q Consensus 1102 TIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~t 1169 (1236)
|++||+.-... +.+.++.+ |++........+||||||||++|||||+.+|+|||||||||+||+.+
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~ 199 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLI 199 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHH
Confidence 99999962111 11222221 55555666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1170 ERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1170 e~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...|
T Consensus 200 r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 200 RTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999998874 47899999999999865 99999999999999999999987644444
No 411
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-40 Score=368.74 Aligned_cols=212 Identities=29% Similarity=0.434 Sum_probs=181.4
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.++++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999753 23589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCCCC--CChhhHHHHHHHHhh--------hchHHHhhhh--chhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1090 GVVSQEPV--LFSDTIRANIAEMAN--------ANGFISGLQE--GYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1090 ~~V~Qdp~--LF~gTIreNL~~~a~--------~~~~i~~lp~--Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
+|+||+|. ++..|+++|+.-... ..+.+..+-+ |+.........+||||||||++||||++.+|++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 165 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNPSVII 165 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999984 455689999852110 0111111111 34334556678999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1158 LDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 166 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 166 LDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999998753 6899999999999988999999999999999999998764
No 412
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.8e-40 Score=366.48 Aligned_cols=215 Identities=26% Similarity=0.391 Sum_probs=174.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCC--CCCCcEEEECCeecCCCCHHHH-hc
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFY--DPQAGEVLIDGVNLKEFQLKWI-RE 461 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~~~g~~~~~~~~~~~-r~ 461 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 46999999999999999999999999999999999994 7999999999999988776554 45
Q ss_pred ceEEEccCCCCCch-hHHHHHhcCCCC---------CCHHHHHHHHHHhccHHHHHhCCCCccc-cccCCCC-CCChHHH
Q 040099 462 KIGLVSQEPVLLSS-SIRDNIAYGKTH---------ATKEEIQAAAEAANASHFIKNLPQGLDT-NVGEHGI-QLSGGQK 529 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~---------~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~g~~g~-~LSgGqk 529 (1236)
.++||+|++.+|++ |++||+.+.... .+.++..+ .+.+.+..+ |++. ....... .||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLK-----LLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHH-----HHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999998876 999999764211 11111111 112223322 3332 2233333 5999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh--cCeEEEEECCEEEEEeCcc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN--ANIIAVIQQGKIVEKGTHS 606 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~--ad~i~vl~~G~i~~~g~~~ 606 (1236)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999999885 47899999999999875 7999999999999999987
Q ss_pred ccc
Q 040099 607 ELL 609 (1236)
Q Consensus 607 ~l~ 609 (1236)
++.
T Consensus 231 ~~~ 233 (243)
T TIGR01978 231 LAK 233 (243)
T ss_pred Hhc
Confidence 543
No 413
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=382.42 Aligned_cols=211 Identities=32% Similarity=0.489 Sum_probs=181.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.++++||+++|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|++||.++.+.++ .|+++
T Consensus 19 ~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 19 LLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred eEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999964 358999999999999999999999999999999999999999999999999987764 47899
Q ss_pred EEEcCCCCCChh-hHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+||+|++.||.. |++|||.-... +.+.++.+ |+.........+||||||||+||||||+++|++|
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lL 171 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLL 171 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999976 99999961111 11122221 4444455667789999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
|||||||+||..+...+.+.|+++. .+.|+|+|||+++.+.. ||+|+||++|++++.|+++++..++...|
T Consensus 172 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~ 245 (377)
T PRK11607 172 LLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 245 (377)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHH
Confidence 9999999999999999998887764 36899999999999755 99999999999999999999998765544
No 414
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=359.71 Aligned_cols=458 Identities=16% Similarity=0.158 Sum_probs=334.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC---CChhHHHHHHHhhHHHHHHHHHH
Q 040099 731 WALMFVALGAASLLTSPLSMYCFAVAGCKLIKRIRSMCFEKVVYMEVGWFDEAD---HSTGAIGARLSSDAALVRSLVGD 807 (1236)
Q Consensus 731 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~---~~~G~l~~rls~D~~~i~~~~~~ 807 (1236)
.+.+|..++++...+...+.|+-.....++-.-|-+.+..+-+...-.|+.... +.+-..=.|+.+|+...-+....
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 355666666677777777888777777777777777777777766633332111 11112236888998877766655
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------------HHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 040099 808 TLSLLVQNTATAVVGLVIAF---------------KACWQLALLVLAIFPLLGITGHIQMKSMKGFSANAENMYEEASQV 872 (1236)
Q Consensus 808 ~l~~~~~~~~~~v~~~ii~~---------------~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1236)
....++..+++++...++++ .+...+.++++..+++--+..++..|.+.+..-+..+..+.....
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 55666666655555444443 222233344444455555555666777777666666677777777
Q ss_pred HHHHHhhHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHH
Q 040099 873 ASDAVSSIRTVASFCAEEKVMKLYKKKCEGPIKAGIRQGLMSGIGFGLSFFFFFMAYAVTFYVGAKLVDHKQATFTEVFR 952 (1236)
Q Consensus 873 ~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~l~~ 952 (1236)
+...-++.+.|..|+-|+...++.++..........+..........+......+..++-+.+++-....|++++|++++
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 88888899999999999988877777766666654444333333333333344444455556666677889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--CCccccCc-----cCCccccEEEeEEEEECCCCCC
Q 040099 953 VFFALSMTAIGISQTSSLASDASKAKSSAASVFGLIDQVSKID--SSEYTGRT-----LENVMGEVQFLRVSFKYPTRPH 1025 (1236)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~--~~~~~~~~-----~~~~~g~I~f~~Vsf~Y~~~~~ 1025 (1236)
...++..+...++......+.+..-.+...|+.++.+.....+ .+.+.... .......|+|+|++..-|+.
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 9999999999999999999999999999999988875433111 11111100 01114679999999998864
Q ss_pred cccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChhhHHH
Q 040099 1026 IEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSDTIRA 1105 (1236)
Q Consensus 1026 ~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIre 1105 (1236)
...|+++||+|+|||.+-|.|+||||||||++.|.|+++.-+|+|..-. -..+-|+||.|.+=.||+||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHH
Confidence 3689999999999999999999999999999999999999999887641 13578999999999999999
Q ss_pred HHH-----------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHH
Q 040099 1106 NIA-----------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIE 1168 (1236)
Q Consensus 1106 NL~-----------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~ 1168 (1236)
=|+ ..+++.++++++.+- + .-..-||+|||||||+||.|+++|++++|||||||||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-~----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-D----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-C----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 885 455666666665321 1 223579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEEecCchhhhhcCEEEEEe
Q 040099 1169 SERVVQDALDQVMVDRTTLVVAHRLSTIKNAHLIAVVS 1206 (1236)
Q Consensus 1169 te~~I~~~L~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~ 1206 (1236)
+|..+.+.+++.+.+.|+|.|+||.......++.+-++
T Consensus 550 ~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 550 TEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999999999999999999988877777765554
No 415
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=366.94 Aligned_cols=211 Identities=28% Similarity=0.432 Sum_probs=181.8
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CC
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQ 1081 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~ 1081 (1236)
..|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 36999999999964 358999999999999999999999999999999999997 579999999999864 34
Q ss_pred hHHHhcceEEEcCCCCCChhhHHHHHHHHhh---h------chHHH----hh--hhchhhhhcCCCCCCChhHHHHHHHH
Q 040099 1082 VKWLRQQMGVVSQEPVLFSDTIRANIAEMAN---A------NGFIS----GL--QEGYDTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1082 ~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~---~------~~~i~----~l--p~Gldt~vge~G~~LSGGQrQRlaLA 1146 (1236)
...+|+.++||||++.+|..|++||+..... . .+.+. .+ .++++...+..+..||||||||++||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~la 175 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLCIA 175 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHHHH
Confidence 6678999999999999999999999952111 1 11111 11 11223456778889999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||++++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 176 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 252 (267)
T PRK14237 176 RAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFTN 252 (267)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998777899999999999855 999999999999999999999765
No 416
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-40 Score=367.93 Aligned_cols=216 Identities=27% Similarity=0.396 Sum_probs=183.2
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCC--------CcEEEECCeecCCCCH
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQ--------AGEVLIDGVNLKEFQL 456 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~~~g~~~~~~~~ 456 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 689999999953 46999999999999999999999999999999999999998 9999999999988777
Q ss_pred HHHhcceEEEccCCC-CCchhHHHHHhcCCC-CC---C--HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPV-LLSSSIRDNIAYGKT-HA---T--KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~-l~~~ti~~ni~~g~~-~~---~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+++.++|++|++. +|..|++||+.++.. .. . .++..+ .+.+.+..+ |+++..+....+||||||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~ 151 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGE-----IAWQALALA--GATALVGRDVTTLSGGEL 151 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHH
Confidence 778888999999986 567899999988631 10 0 011111 112233333 566666777789999999
Q ss_pred HHHHHHHHhc---------CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHh-hcCeEEEEECC
Q 040099 530 QRVAIARAMI---------KDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIR-NANIIAVIQQG 597 (1236)
Q Consensus 530 qRiaiARal~---------~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~-~ad~i~vl~~G 597 (1236)
||++|||||+ .+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||++++|++|
T Consensus 152 qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G 231 (272)
T PRK13547 152 ARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADG 231 (272)
T ss_pred HHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 9999999999 59999999999999999999999999998754 789999999999986 59999999999
Q ss_pred EEEEEeCcccccc
Q 040099 598 KIVEKGTHSELLE 610 (1236)
Q Consensus 598 ~i~~~g~~~~l~~ 610 (1236)
++++.|+++++..
T Consensus 232 ~i~~~g~~~~~~~ 244 (272)
T PRK13547 232 AIVAHGAPADVLT 244 (272)
T ss_pred eEEEecCHHHHcC
Confidence 9999999988865
No 417
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.3e-40 Score=358.41 Aligned_cols=197 Identities=33% Similarity=0.503 Sum_probs=170.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++|++++|+.+ ++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGNV---TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECCe---eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 4789999999753 589999999999999999999999999999999999999999999999999766543 56899
Q ss_pred EEcCCCCCCh-hhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFS-DTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~-gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||++.+|. .|++||+..... +.+.+..+ |++........+||||||||++||||++++|++||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~p~lll 153 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFL 153 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999885 599999852211 11122222 55555667778999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1158 LDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
|||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 154 MDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999875 37899999999999876 9999999999999876
No 418
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=367.01 Aligned_cols=228 Identities=28% Similarity=0.460 Sum_probs=188.5
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECC------eecCCCCH
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDG------VNLKEFQL 456 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g------~~~~~~~~ 456 (1236)
.-|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| +++...+.
T Consensus 9 ~~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 9 DVFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hheeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 35899999999963 4699999999999999999999999999999999999999997766665 56666666
Q ss_pred HHHhcceEEEccCCCCCch-hHHHHHhcCCC--CC-CHHH----HHHHHHHhccHHHHHhCCCCccccccCCCCCCChHH
Q 040099 457 KWIREKIGLVSQEPVLLSS-SIRDNIAYGKT--HA-TKEE----IQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQ 528 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~-ti~~ni~~g~~--~~-~~~~----~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGq 528 (1236)
..+|++++|++|++.+|.+ |++||+.++.. .. .+++ +.++++..++++++ ....++.+..|||||
T Consensus 86 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~ 158 (257)
T PRK14246 86 IKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQ 158 (257)
T ss_pred HHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHH
Confidence 7788999999999999875 99999997632 11 2222 33444444443222 123455677899999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccc
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~ 607 (1236)
|||++||||++.+|+++||||||++||+.++..+.+.|.++.+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999999998877799999999999985 599999999999999999999
Q ss_pred ccccccchhhhhH
Q 040099 608 LLENPYGAYNRLI 620 (1236)
Q Consensus 608 l~~~~~~~y~~~~ 620 (1236)
+..++...|.+.+
T Consensus 239 ~~~~~~~~~~~~~ 251 (257)
T PRK14246 239 IFTSPKNELTEKY 251 (257)
T ss_pred HHhCCCcHHHHHH
Confidence 9876544455443
No 419
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=365.20 Aligned_cols=218 Identities=26% Similarity=0.437 Sum_probs=184.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~i--~~ 1082 (1236)
-|+++||+++|+++ .+|+|+||+|++||.+||+||||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGEK---HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECCe---eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 48999999999743 589999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhh---------chHHHh------hhhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANA---------NGFISG------LQEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~---------~~~i~~------lp~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
...|+.++|+||+|.+|+.|++||+.-.... ...+.. +.+++.+..+..+.+||||||||++|||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 162 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIAR 162 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHHH
Confidence 6778899999999999999999999621111 111111 1223344567788899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
|++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..++...
T Consensus 163 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~ 242 (253)
T PRK14261 163 TLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFENPHEE 242 (253)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHhCCCcH
Confidence 999999999999999999999999999999988777899999999999965 9999999999999999999997654333
Q ss_pred cHHh
Q 040099 1227 YTSL 1230 (1236)
Q Consensus 1227 y~~L 1230 (1236)
+.+.
T Consensus 243 ~~~~ 246 (253)
T PRK14261 243 LTEN 246 (253)
T ss_pred HHHH
Confidence 4443
No 420
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-39 Score=365.52 Aligned_cols=207 Identities=27% Similarity=0.450 Sum_probs=181.1
Q ss_pred CccccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH
Q 040099 1006 NVMGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1006 ~~~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l 1085 (1236)
...+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||
T Consensus 35 ~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g----------- 98 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG----------- 98 (282)
T ss_pred CCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------
Confidence 344579999999952 2589999999999999999999999999999999999999999999998
Q ss_pred hcceEEEcCCCCCChhhHHHHHHH--------------HhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1086 RQQMGVVSQEPVLFSDTIRANIAE--------------MANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~gTIreNL~~--------------~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
+++|+||++.+|++|++||+.- ..++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 --~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 --RISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred --EEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999741 123345566678888888888899999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHH-HHHcCCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhccCcccHHh
Q 040099 1152 EPKILLLDEATSALDIESERVVQDAL-DQVMVDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLISTKNGIYTSL 1230 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L-~~~~~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L 1230 (1236)
+|+||||||||++||+.+...+.+.+ +...+++|+|+|||+++.+..||+|++|++|++++.|+++++.+. ...|...
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 255 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSK 255 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHH
Confidence 99999999999999999999888754 555568899999999999988999999999999999999999864 3445443
Q ss_pred h
Q 040099 1231 I 1231 (1236)
Q Consensus 1231 ~ 1231 (1236)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 3
No 421
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.9e-40 Score=374.07 Aligned_cols=206 Identities=22% Similarity=0.447 Sum_probs=183.1
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++|++++|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 359999999999999999999999999999999999999999999999999976 4467889999
Q ss_pred EEcCCCCCChh-hHHHHHHHHhhh------------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFSD-TIRANIAEMANA------------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~~a~~------------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||+|.+|.+ |++||+.-.+.. ...+..+ |++........+||||||||++|||||+.+|++||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lli 156 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLI 156 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999976 999999622211 1122222 66666677788999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1158 LDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 157 LDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 157 LDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred EcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999998778999999999999876 999999999999999999999764
No 422
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=370.10 Aligned_cols=210 Identities=31% Similarity=0.524 Sum_probs=183.6
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCC---cEEEECCeecccCChHHHh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSS---GHITLDGVEIQKLQVKWLR 1086 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~---G~I~idG~di~~i~~~~lR 1086 (1236)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 5 ~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 58999999999743 2358999999999999999999999999999999999999987 8999999999887777889
Q ss_pred cceEEEcCCC--CCChhhHHHHHHH---Hhh---------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1087 QQMGVVSQEP--VLFSDTIRANIAE---MAN---------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1087 ~~i~~V~Qdp--~LF~gTIreNL~~---~a~---------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
++++||||+| .+++.|++|||.- ..+ +.+.++.+ |++........+||||||||++|||||+.+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~laral~~~ 161 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIAGILAVE 161 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999999998 4678899999951 111 11122221 555566777889999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|++++++..
T Consensus 162 P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 162 PKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999998753 7899999999999988999999999999999999998764
No 423
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=9.2e-40 Score=366.09 Aligned_cols=216 Identities=29% Similarity=0.476 Sum_probs=182.4
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCee-----cccCChHH
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVE-----IQKLQVKW 1084 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~d-----i~~i~~~~ 1084 (1236)
-++++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGPR---KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCCc---eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 48999999999753 58999999999999999999999999999999999999999999999998 87776544
Q ss_pred ----HhcceEEEcCCCC--CC-hhhHHHHHHHHh-------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHH
Q 040099 1085 ----LRQQMGVVSQEPV--LF-SDTIRANIAEMA-------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRV 1143 (1236)
Q Consensus 1085 ----lR~~i~~V~Qdp~--LF-~gTIreNL~~~a-------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRl 1143 (1236)
.|+.++||||++. ++ ..|+.+|+.... .+.++++.+ |++ +..+..+.+||||||||+
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~Gq~qrl 160 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERV--EIDAARIDDLPTTFSGGMQQRL 160 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHc--CCChhHHhCCCccCCHHHHHHH
Confidence 3667999999984 33 347888875211 122334443 343 456788899999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 040099 1144 AIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLI 1220 (1236)
Q Consensus 1144 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl 1220 (1236)
+|||||+++|+||||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 161 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 161 QIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988653 7899999999999975 9999999999999999999998
Q ss_pred hccCcccHHh
Q 040099 1221 STKNGIYTSL 1230 (1236)
Q Consensus 1221 ~~~~g~y~~L 1230 (1236)
.++...|.+.
T Consensus 241 ~~~~~~~~~~ 250 (258)
T PRK11701 241 DDPQHPYTQL 250 (258)
T ss_pred cCCCCHHHHH
Confidence 7644445443
No 424
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=366.93 Aligned_cols=210 Identities=28% Similarity=0.455 Sum_probs=179.4
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~~ 1082 (1236)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5899999999974 358999999999999999999999999999999999865 689999999999865 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhh---------hchHHHhhh--hch----hhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMAN---------ANGFISGLQ--EGY----DTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~---------~~~~i~~lp--~Gl----dt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||++.+|++|++||+.-... ..+.+...- -|+ .........+||||||||++|||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~lar 177 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIAR 177 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHHHHH
Confidence 577899999999999999999999862111 011111110 022 23455677899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 178 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 253 (268)
T PRK14248 178 TLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFTS 253 (268)
T ss_pred HHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999998777899999999998864 999999999999999999999875
No 425
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-40 Score=360.20 Aligned_cols=199 Identities=32% Similarity=0.464 Sum_probs=170.4
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
|+++|++++|+... ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997421 1369999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEcCCCCCCh-hhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLFS-DTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF~-gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+||||+|.+|. .|++||+.-... +.++++.+ |++........+||||||||++|||||+++|++|
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~ll 153 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAVDPDVL 153 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999987 699999852111 11222222 4555566677899999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEe--CCEEEEecCh
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVS--QGMIVEKGSH 1216 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~--~G~Ive~Gt~ 1216 (1236)
||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++-
T Consensus 154 lLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 154 LLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999874 37899999999998865 99999999 7999998864
No 426
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-40 Score=366.89 Aligned_cols=208 Identities=25% Similarity=0.430 Sum_probs=181.3
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHH-hcc
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWL-RQQ 1088 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~l-R~~ 1088 (1236)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999974 359999999999999999999999999999999999999999999999999988776554 456
Q ss_pred eEEEcCCCCCChh-hHHHHHHHHh----------h-----------------hchHHHhhhhchhhhhcCCCCCCChhHH
Q 040099 1089 MGVVSQEPVLFSD-TIRANIAEMA----------N-----------------ANGFISGLQEGYDTLVGERGVQLSGGQK 1140 (1236)
Q Consensus 1089 i~~V~Qdp~LF~g-TIreNL~~~a----------~-----------------~~~~i~~lp~Gldt~vge~G~~LSGGQr 1140 (1236)
++|+||+|.+|.+ |++||+.... + +.++++.+ |++........+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999986 9999986211 0 11112222 566667788889999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 040099 1141 QRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHE 1217 (1236)
Q Consensus 1141 QRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~ 1217 (1236)
||++||||++.+|++|||||||++||+.+...+.+.|.+..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999988753 6899999999999965 9999999999999999999
Q ss_pred HHhhc
Q 040099 1218 SLIST 1222 (1236)
Q Consensus 1218 eLl~~ 1222 (1236)
++...
T Consensus 240 ~~~~~ 244 (255)
T PRK11300 240 EIRNN 244 (255)
T ss_pred HHhhC
Confidence 98653
No 427
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-40 Score=368.96 Aligned_cols=211 Identities=27% Similarity=0.452 Sum_probs=181.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecccCC-hH
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQKLQ-VK 1083 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~i~-~~ 1083 (1236)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999974 3589999999999999999999999999999999999986 6999999999997763 45
Q ss_pred HHhcceEEEcCCCCCChhhHHHHHHHHhhh------ch-------HHHh--hhhchhhhhcCCCCCCChhHHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPVLFSDTIRANIAEMANA------NG-------FISG--LQEGYDTLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~------~~-------~i~~--lp~Gldt~vge~G~~LSGGQrQRlaLARA 1148 (1236)
.+|++++|+||+|.+|+.|++||+...... .+ .+.. ++..+++.+...+.+||||||||++||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LAra 177 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLART 177 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHHHH
Confidence 778999999999999999999999621110 11 1111 11122244567788999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
|+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 178 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 178 LAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999988767899999999999865 9999999999999999999998753
No 428
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=366.78 Aligned_cols=219 Identities=32% Similarity=0.484 Sum_probs=183.2
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CCcEEEECCeecCC--CCH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD--P---QAGEVLIDGVNLKE--FQL 456 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~ 456 (1236)
-|+++||+++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 469999999999999999999999999999999999975 5 59999999998864 334
Q ss_pred HHHhcceEEEccCCCCCchhHHHHHhcCCC--CC-CH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHH
Q 040099 457 KWIREKIGLVSQEPVLLSSSIRDNIAYGKT--HA-TK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQK 529 (1236)
Q Consensus 457 ~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~--~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqk 529 (1236)
..+++.++|++|++.+|+.|++||+.++.. .. .. +++.++++.+++.+ ++.........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWD-------EVKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCcc-------chhhHHhcCcccCCHHHH
Confidence 566788999999999998999999987521 11 11 22333444444322 222345566779999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 530 QRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 530 qRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+..++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998767899999999999865 999999999999999998888
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
..++
T Consensus 235 ~~~~ 238 (252)
T PRK14255 235 FLNP 238 (252)
T ss_pred hcCC
Confidence 7653
No 429
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-40 Score=368.33 Aligned_cols=207 Identities=29% Similarity=0.434 Sum_probs=180.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5899999999974 3589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCCCCCChh-hHHHHHHHHh----------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1090 GVVSQEPVLFSD-TIRANIAEMA----------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1090 ~~V~Qdp~LF~g-TIreNL~~~a----------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
+|+||++.+|.+ |++||+.... .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 165 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV--GLKPLAHRLVDSLSGGERQRAWIAMLVAQD 165 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc--CCHHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999877655 9999996211 011111111 444445566678999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhh
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 166 p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 166 SRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 999999999999999999999999998742 789999999999996 499999999999999999999865
No 430
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=370.08 Aligned_cols=213 Identities=25% Similarity=0.416 Sum_probs=182.4
Q ss_pred cEEEeEEEEECCCCC---CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCC-hHHH
Q 040099 1010 EVQFLRVSFKYPTRP---HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQ-VKWL 1085 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~---~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~-~~~l 1085 (1236)
-++++|++++|++.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 488999999997431 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcceEEEcCCCC--CChhhHHHHHHHHh---h-----hchHHHhh-h-hchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1086 RQQMGVVSQEPV--LFSDTIRANIAEMA---N-----ANGFISGL-Q-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1086 R~~i~~V~Qdp~--LF~gTIreNL~~~a---~-----~~~~i~~l-p-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
|++++||||+|. +|..|+.+|+.-.. + ..+.+..+ . -|+.........+||||||||++|||||+++|
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p 163 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAMRP 163 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 899999999984 67778999985211 1 11112211 1 15666666777899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKNAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+..||++++|++|++++.|+++++.++
T Consensus 164 ~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 164 ECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999875 37899999999999988999999999999999999999764
No 431
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.1e-40 Score=360.96 Aligned_cols=203 Identities=27% Similarity=0.423 Sum_probs=178.6
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-|+++||++.|+.+ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGDA---KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCCc---eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 48999999999743 589999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcCCCCCChhhHHHHHHHHh----------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 040099 1090 GVVSQEPVLFSDTIRANIAEMA----------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARAIVKEPKILLL 1158 (1236)
Q Consensus 1090 ~~V~Qdp~LF~gTIreNL~~~a----------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARALlr~p~ILlL 1158 (1236)
+|++|++.+|+.|++||+.-.. .+.++++.+ |+. +.......+||||||||++|||||+++|++|||
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llll 161 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLL 161 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999999999985211 112233332 453 456778889999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEe-CCEEEEecChh
Q 040099 1159 DEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVS-QGMIVEKGSHE 1217 (1236)
Q Consensus 1159 DEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~-~G~Ive~Gt~~ 1217 (1236)
||||++||+.+...+.+.|++..+ ++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 162 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 162 DEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999998753 789999999999998899999995 66667889885
No 432
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=364.61 Aligned_cols=213 Identities=27% Similarity=0.471 Sum_probs=180.3
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC--C---CCcEEEECCeecccC--C
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD--P---SSGHITLDGVEIQKL--Q 1081 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~--~---~~G~I~idG~di~~i--~ 1081 (1236)
|.|+++|++++|+++ ++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|++||.++... +
T Consensus 3 ~~l~~~nl~~~~~~~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGKN---HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCCe---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 569999999999743 58999999999999999999999999999999999986 4 689999999998643 4
Q ss_pred hHHHhcceEEEcCCCCCCh-hhHHHHHHHHh---h------hchHHHhhh--hch----hhhhcCCCCCCChhHHHHHHH
Q 040099 1082 VKWLRQQMGVVSQEPVLFS-DTIRANIAEMA---N------ANGFISGLQ--EGY----DTLVGERGVQLSGGQKQRVAI 1145 (1236)
Q Consensus 1082 ~~~lR~~i~~V~Qdp~LF~-gTIreNL~~~a---~------~~~~i~~lp--~Gl----dt~vge~G~~LSGGQrQRlaL 1145 (1236)
...+|++++|+||++.+|. .|++||+.... + ..+.+..+- -|+ +...+..+.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 159 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCI 159 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHH
Confidence 5578899999999999998 59999995211 1 001111110 122 234456678999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccC
Q 040099 1146 ARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1146 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~ 1224 (1236)
|||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|+|++.|+++++...+.
T Consensus 160 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 239 (252)
T PRK14256 160 ARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKIFTTPE 239 (252)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 99999999999999999999999999999999998777899999999999855 99999999999999999999986533
No 433
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.8e-40 Score=357.47 Aligned_cols=195 Identities=35% Similarity=0.583 Sum_probs=169.2
Q ss_pred EEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEE
Q 040099 1012 QFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGV 1091 (1236)
Q Consensus 1012 ~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1091 (1236)
+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999752 1358999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCCC--CCChhhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1092 VSQEP--VLFSDTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1092 V~Qdp--~LF~gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
+||+| .++..|++||+..... +.++++.+ |++.........||||||||++|||||+++|++||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lll 157 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILL 157 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99998 3678899999852111 11122221 55555667778999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhhh-cCEEEEEeCCE
Q 040099 1158 LDEATSALDIESERVVQDALDQVMV-DRTTLVVAHRLSTIKN-AHLIAVVSQGM 1209 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHRl~ti~~-aD~I~Vl~~G~ 1209 (1236)
|||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 158 lDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 158 LDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999988754 7899999999999987 99999999985
No 434
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=347.14 Aligned_cols=221 Identities=29% Similarity=0.497 Sum_probs=190.7
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH-hcce
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI-REKI 463 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i 463 (1236)
+++++++++|. +-.+++||||++++||+++|+|||||||||++|+|+|+|+|++|+|.++|+||...++... |..|
T Consensus 5 L~v~~l~k~FG---Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 5 LEVRGLSKRFG---GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeccceeecC---CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 67999999996 3569999999999999999999999999999999999999999999999999999997765 5569
Q ss_pred EEEccCCCCCch-hHHHHHhcCCCCC-----------CHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHH
Q 040099 464 GLVSQEPVLLSS-SIRDNIAYGKTHA-----------TKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQR 531 (1236)
Q Consensus 464 ~~v~Q~~~l~~~-ti~~ni~~g~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqR 531 (1236)
+--+|.+.+|++ ||.||+..+.... ...+..++.+. +.+.++.+ |++...++...+||+|||.|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~--A~~~Le~v--gL~~~a~~~A~~LsyG~qR~ 157 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARER--ARELLEFV--GLGELADRPAGNLSYGQQRR 157 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHH--HHHHHHHc--CCchhhcchhhcCChhHhHH
Confidence 999999999976 9999999873211 11112222222 22344444 78778888888999999999
Q ss_pred HHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccc
Q 040099 532 VAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSEL 608 (1236)
Q Consensus 532 iaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l 608 (1236)
+.|||||+.+|++|+||||.++|.+.....+.+.|+++++ |.|+++|.||++.+.. ||||+||+.|+++.+|+++|+
T Consensus 158 LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV 237 (250)
T COG0411 158 LEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEV 237 (250)
T ss_pred HHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHH
Confidence 9999999999999999999999999999999999999975 4899999999999876 999999999999999999999
Q ss_pred cccc
Q 040099 609 LENP 612 (1236)
Q Consensus 609 ~~~~ 612 (1236)
.++|
T Consensus 238 ~~dp 241 (250)
T COG0411 238 RNNP 241 (250)
T ss_pred hcCH
Confidence 8764
No 435
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=364.36 Aligned_cols=215 Identities=28% Similarity=0.419 Sum_probs=180.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCC-----CcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPS-----SGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~-----~G~I~idG~di~~--i~~ 1082 (1236)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999974 35899999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhcceEEEcCCCCCChh-hHHHHHHHHhhh---------chHHHhh------hhchhhhhcCCCCCCChhHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSD-TIRANIAEMANA---------NGFISGL------QEGYDTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~g-TIreNL~~~a~~---------~~~i~~l------p~Gldt~vge~G~~LSGGQrQRlaLA 1146 (1236)
..+|+.++|+||+|.+|.. |++||+...... .+....+ ..++.........+||||||||++||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIA 160 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHH
Confidence 6788999999999999985 999999521110 1111111 11122333455678999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCc
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNG 1225 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g 1225 (1236)
|||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++++.++..
T Consensus 161 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 240 (252)
T PRK14272 161 RALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFTNPRD 240 (252)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCc
Confidence 9999999999999999999999999999999988777999999999999986 999999999999999999999876444
Q ss_pred cc
Q 040099 1226 IY 1227 (1236)
Q Consensus 1226 ~y 1227 (1236)
.|
T Consensus 241 ~~ 242 (252)
T PRK14272 241 ER 242 (252)
T ss_pred HH
Confidence 34
No 436
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=363.28 Aligned_cols=210 Identities=30% Similarity=0.488 Sum_probs=180.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCC-----CcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPS-----SGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~-----~G~I~idG~di~~--i~~ 1082 (1236)
.|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~~---~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHKH---QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECCe---eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 58999999999743 5899999999999999999999999999999999999987 6999999999864 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhh---------chHHH------hhhhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANA---------NGFIS------GLQEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~---------~~~i~------~lp~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|+.++||||+|.+|+.|++||+.-.... .+.+. .+.+.+.......+.+||||||||++|||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~lar 160 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIAR 160 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHHH
Confidence 6789999999999999999999999621110 01111 11112234456778899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14249 161 VLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFSR 236 (251)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHhC
Confidence 999999999999999999999999999999987667899999999999976 899999999999999999999765
No 437
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=367.83 Aligned_cols=207 Identities=27% Similarity=0.392 Sum_probs=176.9
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecc--cCChHHHhcc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQ--KLQVKWLRQQ 1088 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~--~i~~~~lR~~ 1088 (1236)
++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999974 35899999999999999999999999999999999999999999999999985 3345678899
Q ss_pred eEEEcCCCC--CChhhHHHHHHHHhhh------------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEPV--LFSDTIRANIAEMANA------------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp~--LF~gTIreNL~~~a~~------------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
++||||+|. +|..|+.+|+...... .+.++.+ |++........+||||||||++|||||+.+|+
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~ 156 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGALVLQAR 156 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 999999985 6778999998521111 1111111 34334455677899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 157 lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 157 YLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999875 47899999999999965 999999999999999999998764
No 438
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.5e-40 Score=355.83 Aligned_cols=193 Identities=32% Similarity=0.519 Sum_probs=165.5
Q ss_pred EEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEE
Q 040099 1012 QFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGV 1091 (1236)
Q Consensus 1012 ~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1091 (1236)
+++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 367999999741 358999999999999999999999999999999999999999999999998864 456789999
Q ss_pred EcCCC--CCChhhHHHHHHHHh--------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecC
Q 040099 1092 VSQEP--VLFSDTIRANIAEMA--------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEA 1161 (1236)
Q Consensus 1092 V~Qdp--~LF~gTIreNL~~~a--------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEa 1161 (1236)
+||+| .+|..|++||+.... .+.++++.+ |++.........||||||||++|||||+++|++||||||
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP 153 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL--DLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEP 153 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc--CCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99998 467889999995211 122223322 444445566678999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEE
Q 040099 1162 TSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIV 1211 (1236)
Q Consensus 1162 TSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Iv 1211 (1236)
|++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 154 t~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 154 TSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999873 57899999999999975 9999999999985
No 439
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-40 Score=360.84 Aligned_cols=210 Identities=29% Similarity=0.525 Sum_probs=180.3
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 478999999962 38999999999999999999999999999999999999999999999999876554 367899
Q ss_pred EEccCCCCCc-hhHHHHHhcCCCC--CC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKTH--AT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|. .|+.||+.++... .+ .+++.++++..++.+++. ....+||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLN-----------RKPETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHh-----------cCcccCCHHHHHHHHHHHH
Confidence 9999999885 6999999875321 11 223445555555554443 3445899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
++++|++++|||||++||+.+.+.+.+.|+++.. ++|+|++||++..+.. ||+|++|++|++++.|+++++.+.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999875 999999999999999999888764
No 440
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-40 Score=365.01 Aligned_cols=214 Identities=29% Similarity=0.467 Sum_probs=181.0
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeecccCC--hH
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQKLQ--VK 1083 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~i~--~~ 1083 (1236)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|+++|.++.+.+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999974 358999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HHhcceEEEcCCCCCChhhHHHHHHHHhhh----------chHHHhh-h-hchh----hhhcCCCCCCChhHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPVLFSDTIRANIAEMANA----------NGFISGL-Q-EGYD----TLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~----------~~~i~~l-p-~Gld----t~vge~G~~LSGGQrQRlaLAR 1147 (1236)
.+|++++||||++.+|.+|++||+...... .+.+..+ . -|++ +.++..+.+||||||||++|||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~lar 162 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIAR 162 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHH
Confidence 678999999999999999999998522111 1111111 1 1332 3455677899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+...
T Consensus 163 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~ 242 (251)
T PRK14244 163 AIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKNPQSS 242 (251)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcCCCCh
Confidence 999999999999999999999999999999988778999999999999865 9999999999999999999998765444
Q ss_pred c
Q 040099 1227 Y 1227 (1236)
Q Consensus 1227 y 1227 (1236)
|
T Consensus 243 ~ 243 (251)
T PRK14244 243 K 243 (251)
T ss_pred H
Confidence 4
No 441
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.3e-40 Score=377.20 Aligned_cols=200 Identities=25% Similarity=0.432 Sum_probs=171.2
Q ss_pred CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceEEEccCCCCCch-hHH
Q 040099 400 EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIGLVSQEPVLLSS-SIR 478 (1236)
Q Consensus 400 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~-ti~ 478 (1236)
+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++|||++|++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999875 345678899999999999875 999
Q ss_pred HHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCC
Q 040099 479 DNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATS 552 (1236)
Q Consensus 479 ~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts 552 (1236)
||+.+... ..+. +++.++++..+ ++........+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFE-----------LGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99987421 1122 22334444443 3333445556899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccccc
Q 040099 553 ALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 553 ~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 611 (1236)
+||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999885 47899999999999875 999999999999999999988654
No 442
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.2e-40 Score=379.42 Aligned_cols=201 Identities=27% Similarity=0.389 Sum_probs=171.9
Q ss_pred ccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCe----ecccCChHHHh----cceEEEcCCCCC
Q 040099 1027 EVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGV----EIQKLQVKWLR----QQMGVVSQEPVL 1098 (1236)
Q Consensus 1027 ~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~----di~~i~~~~lR----~~i~~V~Qdp~L 1098 (1236)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+...+| ++|+||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5899999999999999999999999999999999999999999999996 67777665543 589999999999
Q ss_pred Ch-hhHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCC
Q 040099 1099 FS-DTIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSAL 1165 (1236)
Q Consensus 1099 F~-gTIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaL 1165 (1236)
|+ .|++||+.-.. .+.++++.+ |++........+||||||||++|||||+++|+|||||||||+|
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~L 195 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSAL 195 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 97 69999996211 111222222 5554555667789999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhccCcccHH
Q 040099 1166 DIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLISTKNGIYTS 1229 (1236)
Q Consensus 1166 D~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~ 1229 (1236)
|+.+...+++.|.++.+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++.++...|.+
T Consensus 196 D~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~~ 262 (382)
T TIGR03415 196 DPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVA 262 (382)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHHH
Confidence 99999999999988754 789999999999985 59999999999999999999998765555543
No 443
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=9.1e-40 Score=359.92 Aligned_cols=202 Identities=38% Similarity=0.563 Sum_probs=171.9
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh---HHHh
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV---KWLR 1086 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~---~~lR 1086 (1236)
|+++||+++|+.+. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999997431 1258999999999999999999999999999999999999999999999999988763 5778
Q ss_pred cceEEEcCCC--CCC-hhhHHHHHHHHhhh--------------chHHHhhhhchh-hhhcCCCCCCChhHHHHHHHHHH
Q 040099 1087 QQMGVVSQEP--VLF-SDTIRANIAEMANA--------------NGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1087 ~~i~~V~Qdp--~LF-~gTIreNL~~~a~~--------------~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLARA 1148 (1236)
++++|+||+| .++ ..|++||+...... .+++..+ |++ ........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~lara 159 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGV--GLPEEVLNRYPHELSGGQRQRVAIARA 159 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHC--CCChhHhhCCchhcCHHHHHHHHHHHH
Confidence 8999999999 344 57999998521100 0112221 443 45567778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEec
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~G 1214 (1236)
|+.+|+||||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 160 LALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999998764 789999999999997 59999999999998865
No 444
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-40 Score=365.50 Aligned_cols=216 Identities=26% Similarity=0.465 Sum_probs=184.8
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999974 35999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEcCCCCCChh-hHHHHHHHHh-------h-----hchHHHh-hh-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCCE
Q 040099 1091 VVSQEPVLFSD-TIRANIAEMA-------N-----ANGFISG-LQ-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKI 1155 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~~a-------~-----~~~~i~~-lp-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~I 1155 (1236)
|+||++.+|.+ |++||+.-.. + ..+.+.. +. -|++.........||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 159 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQDTPV 159 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999998876 9999985210 0 0011111 11 1555556677889999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcccHHhh
Q 040099 1156 LLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIYTSLI 1231 (1236)
Q Consensus 1156 LlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y~~L~ 1231 (1236)
|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++... ..+.+.+
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~--~~~~~~~ 235 (255)
T PRK11231 160 VLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP--GLLRTVF 235 (255)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH--HHHHHHh
Confidence 99999999999999999999998865 47899999999999865 999999999999999999998753 3344443
No 445
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.5e-40 Score=361.25 Aligned_cols=214 Identities=28% Similarity=0.447 Sum_probs=172.1
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC---CCCcEEEECCeecCCCCHHHHh
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD---PQAGEVLIDGVNLKEFQLKWIR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r 460 (1236)
++|+||+|+|++.+ .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999997532 3679999999999999999999999999999999999999 99999999999875 34567
Q ss_pred cceEEEccCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHhccHH-HHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 040099 461 EKIGLVSQEPVLLSS-SIRDNIAYGKTHATKEEIQAAAEAANASH-FIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAM 538 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal 538 (1236)
++++|++|++.+|+. |++||+.++..........+.......++ .+..+ +++.........||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 889999999999987 99999987532110000000000001111 22222 444445556679999999999999999
Q ss_pred cCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCc-hhH-hhcCeEEEEECCEEEEEe
Q 040099 539 IKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRL-SLI-RNANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 539 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~-~~~-~~ad~i~vl~~G~i~~~g 603 (1236)
+++|++|||||||++||+.+...+.+.|+++. +++|+|++||++ ..+ +.||++++|++|+++++|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998875 478999999998 455 559999999999999865
No 446
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-40 Score=356.33 Aligned_cols=195 Identities=22% Similarity=0.466 Sum_probs=169.7
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ..|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999974 358999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEcCCCCCChh-hHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFSD-TIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||++.+|.+ |++||+.-... +.++++.+ |++........+||||||||++||||++.+|++||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ll 151 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLI 151 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999875 99999852211 12233332 55556667778999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1158 LDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 152 lDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 152 LDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999998864 46899999999999865 9999999999998865
No 447
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.1e-39 Score=360.40 Aligned_cols=205 Identities=33% Similarity=0.507 Sum_probs=177.9
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++|++++|+.+ ++|+|+||+|.+||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~~---~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGSF---QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECCe---eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 4789999999743 59999999999999999999999999999999999999999999999999986653 478899
Q ss_pred EEcCCCCCChh-hHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 040099 1091 VVSQEPVLFSD-TIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILL 1157 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILl 1157 (1236)
|+||+|.+|++ |++||+.... .+.+.++.+ |+.........+|||||+||++||||++++|+++|
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~p~lll 153 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLL 153 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999976 9999995211 112223332 33334455667899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1158 LDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1158 LDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 154 lDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 154 LDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999998654 6899999999999865 999999999999999999999764
No 448
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=363.65 Aligned_cols=203 Identities=29% Similarity=0.467 Sum_probs=171.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +..++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 689999999963 4699999999999999999999999999999999999999999999999988642 24699
Q ss_pred EEccCCCCCc-hhHHHHHhcCCC--CCCH----HHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKT--HATK----EEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARA 537 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARa 537 (1236)
|++|++.+|+ .|++||+.++.. .... +++.++++.. |++......+.+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKV-----------GLEGAEKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHc-----------CChhHhhCChhhCCHHHHHHHHHHHH
Confidence 9999999887 599999987531 1122 2233344444 44434445567899999999999999
Q ss_pred hcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc--cCceEEEEecCchhHhh-cCeEEEEE--CCEEEEEeCcc
Q 040099 538 MIKDPRILLLDEATSALDSESGRMVQEALDRVM--INRTTVIVSHRLSLIRN-ANIIAVIQ--QGKIVEKGTHS 606 (1236)
Q Consensus 538 l~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~~~~~~~-ad~i~vl~--~G~i~~~g~~~ 606 (1236)
|+.+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||+|++|+ +|+++++++.+
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 999999999999999999999999999999873 37899999999999865 99999998 59999988653
No 449
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=371.68 Aligned_cols=219 Identities=29% Similarity=0.539 Sum_probs=185.6
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCCcEEEECCeecCCC--C
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-----PQAGEVLIDGVNLKEF--Q 455 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~--~ 455 (1236)
..|+++|++++|++ +++|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35899999999963 469999999999999999999999999999999999986 6899999999998643 3
Q ss_pred HHHHhcceEEEccCCCCCchhHHHHHhcCCCCC-------------------CHHHHHHHHHHhccHHHHHhCCCCcccc
Q 040099 456 LKWIREKIGLVSQEPVLLSSSIRDNIAYGKTHA-------------------TKEEIQAAAEAANASHFIKNLPQGLDTN 516 (1236)
Q Consensus 456 ~~~~r~~i~~v~Q~~~l~~~ti~~ni~~g~~~~-------------------~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 516 (1236)
...+|++|+||+|++.+|+.|++||+.++.... .++++.++++.+++ ++++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAAL-------WDEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCC-------chhhhHH
Confidence 556788999999999999999999999763210 01223334443333 2334455
Q ss_pred ccCCCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhh-cCeE-EEE
Q 040099 517 VGEHGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRN-ANII-AVI 594 (1236)
Q Consensus 517 ~g~~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~-ad~i-~vl 594 (1236)
.+..+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 67778899999999999999999999999999999999999999999999998777899999999999865 9997 578
Q ss_pred ECCEEEEEeCccccccc
Q 040099 595 QQGKIVEKGTHSELLEN 611 (1236)
Q Consensus 595 ~~G~i~~~g~~~~l~~~ 611 (1236)
++|++++.|+++++...
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999888654
No 450
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=365.04 Aligned_cols=211 Identities=28% Similarity=0.466 Sum_probs=179.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeecc--cCCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQ--KLQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~--~i~~ 1082 (1236)
-|+++||+++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ..+.
T Consensus 10 ~l~i~~v~~~~~~~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGSF---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECCE---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 48999999999743 58999999999999999999999999999999999986 37999999999985 3456
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhh-------chHH----Hh--hhhchhhhhcCCCCCCChhHHHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANA-------NGFI----SG--LQEGYDTLVGERGVQLSGGQKQRVAIARAI 1149 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~-------~~~i----~~--lp~Gldt~vge~G~~LSGGQrQRlaLARAL 1149 (1236)
..+|++++|++|++.+|+.|++||+...... .+.+ .. +.++++......+.+||||||||++|||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~laral 166 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARAI 166 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHHH
Confidence 6788999999999999989999999521111 0111 11 111223345667789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEe---------CCEEEEecChhHH
Q 040099 1150 VKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVS---------QGMIVEKGSHESL 1219 (1236)
Q Consensus 1150 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~---------~G~Ive~Gt~~eL 1219 (1236)
+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|+|++.|+++++
T Consensus 167 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~~~~ 246 (264)
T PRK14243 167 AVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDRTEKI 246 (264)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCCHHHH
Confidence 9999999999999999999999999999998777899999999999865 99999998 8999999999999
Q ss_pred hhcc
Q 040099 1220 ISTK 1223 (1236)
Q Consensus 1220 l~~~ 1223 (1236)
.+.+
T Consensus 247 ~~~~ 250 (264)
T PRK14243 247 FNSP 250 (264)
T ss_pred HhCC
Confidence 8753
No 451
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.7e-40 Score=356.00 Aligned_cols=196 Identities=31% Similarity=0.521 Sum_probs=168.4
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh---HHHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV---KWLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~---~~lR~ 1087 (1236)
++++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4689999999743 358999999999999999999999999999999999999999999999999987654 35788
Q ss_pred ceEEEcCCCCCChh-hHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1088 QMGVVSQEPVLFSD-TIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~g-TIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
.++||||+|.+|.. |++||+..... +.+.++.+ |++........+||||||||++|||||+++|+
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 156 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAIVNSPT 156 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHHHcCCC
Confidence 99999999999984 99999962211 11112211 45555556677899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEE
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMI 1210 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~I 1210 (1236)
+|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 157 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 157 ILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999874 47899999999999976 999999999974
No 452
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=364.20 Aligned_cols=213 Identities=30% Similarity=0.448 Sum_probs=181.0
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeeccc--CC
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQK--LQ 1081 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~--i~ 1081 (1236)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 46899999999974 2589999999999999999999999999999999999985 48999999999864 44
Q ss_pred hHHHhcceEEEcCCCCCChhhHHHHHHHHhh---------hchHHHhhhh--ch----hhhhcCCCCCCChhHHHHHHHH
Q 040099 1082 VKWLRQQMGVVSQEPVLFSDTIRANIAEMAN---------ANGFISGLQE--GY----DTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1082 ~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~---------~~~~i~~lp~--Gl----dt~vge~G~~LSGGQrQRlaLA 1146 (1236)
...+|++++|+||+|.+|+.|++||+.-... ..+.+...-+ |+ .......+..||||||||++||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 162 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIA 162 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHH
Confidence 5678899999999999999999999952111 1111211111 22 2345567789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEe-----CCEEEEecChhHHh
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVS-----QGMIVEKGSHESLI 1220 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~-----~G~Ive~Gt~~eLl 1220 (1236)
|||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.|+++++.
T Consensus 163 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 163 RALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCHHHHh
Confidence 9999999999999999999999999999999998777899999999999965 99999998 59999999999997
Q ss_pred hccC
Q 040099 1221 STKN 1224 (1236)
Q Consensus 1221 ~~~~ 1224 (1236)
+.+.
T Consensus 243 ~~~~ 246 (259)
T PRK14260 243 SNPL 246 (259)
T ss_pred cCCC
Confidence 6533
No 453
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=374.60 Aligned_cols=217 Identities=24% Similarity=0.398 Sum_probs=180.9
Q ss_pred EEEeEEEEECCCCC-CcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC----CCCcEEEECCeecccCChHHH
Q 040099 1011 VQFLRVSFKYPTRP-HIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD----PSSGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~-~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~----~~~G~I~idG~di~~i~~~~l 1085 (1236)
++++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|++||.|+.+++...+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 78999999996421 2459999999999999999999999999999999999986 589999999999988887655
Q ss_pred h----cceEEEcCCCC--CC-hhhHHHHHHHHhh------------------hchHHHhhhhchh---hhhcCCCCCCCh
Q 040099 1086 R----QQMGVVSQEPV--LF-SDTIRANIAEMAN------------------ANGFISGLQEGYD---TLVGERGVQLSG 1137 (1236)
Q Consensus 1086 R----~~i~~V~Qdp~--LF-~gTIreNL~~~a~------------------~~~~i~~lp~Gld---t~vge~G~~LSG 1137 (1236)
+ ++|+||+|+|. ++ ..||.+|+.+... +.+.++.+ |++ .........|||
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--gL~~~~~~~~~~p~~LSg 161 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRV--GIKDHKDAMRSFPYELTE 161 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHC--CCCChHHHHhCCchhCCH
Confidence 3 47999999996 33 3589998853211 01111111 342 224566779999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1138 GQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1138 GQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
|||||++|||||+.+|+|||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|
T Consensus 162 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g 241 (330)
T PRK15093 162 GECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVETA 241 (330)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999999998754 7899999999999965 9999999999999999
Q ss_pred ChhHHhhccCcccHH
Q 040099 1215 SHESLISTKNGIYTS 1229 (1236)
Q Consensus 1215 t~~eLl~~~~g~y~~ 1229 (1236)
+++++++++...|.+
T Consensus 242 ~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 242 PSKELVTTPHHPYTQ 256 (330)
T ss_pred CHHHHHhCCCCHHHH
Confidence 999998875556755
No 454
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.4e-39 Score=374.98 Aligned_cols=207 Identities=27% Similarity=0.468 Sum_probs=178.3
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
-|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4899999999974 35999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred EEEcCCCCCC-hhhHHHHHHHHhhh------------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEE
Q 040099 1090 GVVSQEPVLF-SDTIRANIAEMANA------------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKIL 1156 (1236)
Q Consensus 1090 ~~V~Qdp~LF-~gTIreNL~~~a~~------------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~IL 1156 (1236)
+|+||++.+| ..|++||+.-.+.. .++++. -|++........+||||||||++|||||+.+|++|
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~--~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lL 194 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEF--ARLESKADARVSDLSGGMKRRLTLARALINDPQLL 194 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHH--cCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999887 46999999622211 112211 12332333445689999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1157 LLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1157 lLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||||||++||+.+...+++.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 195 iLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 195 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999875 47899999999999965 999999999999999999999764
No 455
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=362.78 Aligned_cols=209 Identities=30% Similarity=0.459 Sum_probs=181.4
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..++...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999974 35899999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEcCCCCC-ChhhHHHHHHHHhh--------hchHHHh-hh-hchhhhhcCCCCCCChhHHHHHHHHHHHc------cCC
Q 040099 1091 VVSQEPVL-FSDTIRANIAEMAN--------ANGFISG-LQ-EGYDTLVGERGVQLSGGQKQRVAIARAIV------KEP 1153 (1236)
Q Consensus 1091 ~V~Qdp~L-F~gTIreNL~~~a~--------~~~~i~~-lp-~Gldt~vge~G~~LSGGQrQRlaLARALl------r~p 1153 (1236)
|+||++.+ +..|++||+..... ....+.. +. -|++.........||||||||++|||||+ .+|
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~p 159 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGPP 159 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccccCCCC
Confidence 99999987 67799999852111 0111111 11 15655566777899999999999999999 599
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 160 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (258)
T PRK13548 160 RWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLTP 231 (258)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhCh
Confidence 9999999999999999999999999875 4789999999999987 4999999999999999999998763
No 456
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=362.10 Aligned_cols=210 Identities=30% Similarity=0.417 Sum_probs=180.0
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~i--~~ 1082 (1236)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 4889999999974 3589999999999999999999999999999999999875 799999999999653 44
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhhc-------------hHHHhh--hhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANAN-------------GFISGL--QEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~-------------~~i~~l--p~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||++.+|+.|++||+.-..... +.++.+ .+++..........||||||||++|||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lar 160 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCIAR 160 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHH
Confidence 57789999999999999999999996211110 111111 112223456677899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 161 al~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14270 161 TIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFLE 236 (251)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhcC
Confidence 999999999999999999999999999999988777899999999999865 999999999999999999999764
No 457
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.1e-39 Score=379.83 Aligned_cols=212 Identities=32% Similarity=0.495 Sum_probs=178.6
Q ss_pred eEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCC----HHHHhcceE
Q 040099 389 DVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQ----LKWIREKIG 464 (1236)
Q Consensus 389 ~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~----~~~~r~~i~ 464 (1236)
|++++|++ .. + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ....+++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999953 23 4 999999999999999999999999999999999999999999999986532 235678899
Q ss_pred EEccCCCCCch-hHHHHHhcCCCCCCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhc
Q 040099 465 LVSQEPVLLSS-SIRDNIAYGKTHATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMI 539 (1236)
Q Consensus 465 ~v~Q~~~l~~~-ti~~ni~~g~~~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~ 539 (1236)
||+|++.+|+. |++||+.++....... ++.+.++.. |++......+.+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELL-----------GIGHLLGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHc-----------CChhHhcCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 9999999875332221 233333333 4555555666799999999999999999
Q ss_pred CCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCcccccccccchh
Q 040099 540 KDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELLENPYGAY 616 (1236)
Q Consensus 540 ~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~y 616 (1236)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 99999999999999999999999999998754 7899999999999865 99999999999999999999887644333
No 458
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-39 Score=357.95 Aligned_cols=207 Identities=34% Similarity=0.475 Sum_probs=179.1
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
|+++|++++|+.. ++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|++||.++.+.+. .++.++
T Consensus 1 l~~~~l~~~~~~~---~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGGF---VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCCe---eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 4689999999743 59999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEcCCCCCChh-hHHHHHHHHhhhc--------hHHHh-hh-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 040099 1091 VVSQEPVLFSD-TIRANIAEMANAN--------GFISG-LQ-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLD 1159 (1236)
Q Consensus 1091 ~V~Qdp~LF~g-TIreNL~~~a~~~--------~~i~~-lp-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLD 1159 (1236)
|+||+|.+|.+ |++||+....... ..+.. +. -|++.........||||||||++||||++++|++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLLLD 155 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999975 9999985221110 01111 11 15666666777899999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1160 EATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1160 EaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 EP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 156 EPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 99999999999999999998753 7899999999999865 999999999999999999999875
No 459
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=361.33 Aligned_cols=210 Identities=30% Similarity=0.483 Sum_probs=180.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecc-cCChH
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQ-KLQVK 1083 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~-~i~~~ 1083 (1236)
.++++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4789999999974 3589999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HHhcceEEEcCCCCCChhhHHHHHHHHhhhc-----h----HHH------hhhhchhhhhcCCCCCCChhHHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPVLFSDTIRANIAEMANAN-----G----FIS------GLQEGYDTLVGERGVQLSGGQKQRVAIARA 1148 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~-----~----~i~------~lp~Gldt~vge~G~~LSGGQrQRlaLARA 1148 (1236)
.+|+.++|+||+|.+|..|++||+.-..... + .+. .+.+++..........||||||||++||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 159 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIART 159 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHH
Confidence 8899999999999999999999996221110 0 111 111122345566778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1149 IVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1149 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
|+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+|++.|+++++..+
T Consensus 160 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 234 (249)
T PRK14253 160 IAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSN 234 (249)
T ss_pred HHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 99999999999999999999999999999998777899999999999876 999999999999999999998754
No 460
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=354.44 Aligned_cols=228 Identities=30% Similarity=0.504 Sum_probs=185.6
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC-C----CCcEEEECCeecCCCCHHH
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD-P----QAGEVLIDGVNLKEFQLKW 458 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-~----~~G~i~~~g~~~~~~~~~~ 458 (1236)
++++|++.+|+... ...+++||||++++||++||||+|||||||+.+.|+|+.+ | .+|+|.++|+|+-.++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 67899999997432 2579999999999999999999999999999999999998 4 5799999999999988765
Q ss_pred H---h-cceEEEccCCCC-Cc--hhHHH----HHhcCCCCCC----HHHHHHHHHHhccHHHHHhCCCCccccccCCCCC
Q 040099 459 I---R-EKIGLVSQEPVL-LS--SSIRD----NIAYGKTHAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQ 523 (1236)
Q Consensus 459 ~---r-~~i~~v~Q~~~l-~~--~ti~~----ni~~g~~~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~ 523 (1236)
+ | +.|+||||||.- ++ .||.+ -+.......+ .++..+.++.+++.+- +..+...+.+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~--------~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDP--------ERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCH--------HHHHhhCCcc
Confidence 3 3 479999999842 22 24444 4443111101 2345555566655421 1233445569
Q ss_pred CChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEE
Q 040099 524 LSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIV 600 (1236)
Q Consensus 524 LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~ 600 (1236)
||||||||+.||-||+.+|++||.||||+|||..++++|.+.|+++.+ |.|+|+|||++..+.. ||||+||..|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 999999999999999999999999999999999999999999999874 7899999999999865 9999999999999
Q ss_pred EEeCcccccccccchhhhhH
Q 040099 601 EKGTHSELLENPYGAYNRLI 620 (1236)
Q Consensus 601 ~~g~~~~l~~~~~~~y~~~~ 620 (1236)
|.|+.++++.+|...|.+..
T Consensus 234 E~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EeCCHHHHhcCCCChHHHHH
Confidence 99999999999988898754
No 461
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.9e-41 Score=334.83 Aligned_cols=224 Identities=23% Similarity=0.440 Sum_probs=191.0
Q ss_pred CcEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHH-hc
Q 040099 383 GDIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWI-RE 461 (1236)
Q Consensus 383 ~~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~ 461 (1236)
+.+..+|+.++|. .++|+++|||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.|+..++.... |-
T Consensus 3 ~~L~a~~l~K~y~---kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYK---KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhC---CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 3578999999996 3579999999999999999999999999999999999999999999999999999997654 55
Q ss_pred ceEEEccCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 040099 462 KIGLVSQEPVLLSS-SIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIK 540 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~ 540 (1236)
.|||+||+|.+|.+ ||+|||..-.+.. ..+.+.+.+...+++.++.+ .+.......+.+||||||+|+-|||||..
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~-~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIR-EKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhh-hcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhc
Confidence 79999999999987 9999998754321 11122223333344445555 66777778899999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCch-hHhhcCeEEEEECCEEEEEeCcccccccc
Q 040099 541 DPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLS-LIRNANIIAVIQQGKIVEKGTHSELLENP 612 (1236)
Q Consensus 541 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~-~~~~ad~i~vl~~G~i~~~g~~~~l~~~~ 612 (1236)
+|+.++||||++++||.+-..|++.++.++ +|--+++.-|... |+.-|||.+++.+|+|..+|+++|+.+++
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 999999999999999999999999999886 4678888889875 57779999999999999999999999863
No 462
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.7e-39 Score=365.24 Aligned_cols=227 Identities=29% Similarity=0.442 Sum_probs=187.0
Q ss_pred EEEEeEEEECCCC------CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCH--
Q 040099 385 IELKDVNFSYPAR------PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQL-- 456 (1236)
Q Consensus 385 i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-- 456 (1236)
|+++||+|.|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 7899999999631 13579999999999999999999999999999999999999999999999999887654
Q ss_pred -HHHhcceEEEccCCC--CC-chhHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccc-cccCCCCCCChHH
Q 040099 457 -KWIREKIGLVSQEPV--LL-SSSIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDT-NVGEHGIQLSGGQ 528 (1236)
Q Consensus 457 -~~~r~~i~~v~Q~~~--l~-~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~g~~g~~LSgGq 528 (1236)
..+++.++|++|++. ++ ..|+.||+.+... ..+.+ .....+++.+..+ |+++ ..+..+..|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 346788999999983 44 3699999865321 11111 1112234445554 6653 5667778999999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCc
Q 040099 529 KQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTH 605 (1236)
Q Consensus 529 kqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~ 605 (1236)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998853 7899999999999975 999999999999999999
Q ss_pred ccccccccchhhhh
Q 040099 606 SELLENPYGAYNRL 619 (1236)
Q Consensus 606 ~~l~~~~~~~y~~~ 619 (1236)
+++... .+.|...
T Consensus 237 ~~~~~~-~~~~~~~ 249 (268)
T PRK10419 237 GDKLTF-SSPAGRV 249 (268)
T ss_pred hhccCC-CCHHHHH
Confidence 998764 4445443
No 463
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=366.51 Aligned_cols=215 Identities=28% Similarity=0.428 Sum_probs=180.6
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~i--~~ 1082 (1236)
.|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~~---~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGEF---EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECCE---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 58999999999743 48999999999999999999999999999999999864 4999999999998643 33
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHh---hh------chHHHhhhh--ch----hhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMA---NA------NGFISGLQE--GY----DTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a---~~------~~~i~~lp~--Gl----dt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++||||+|.+|..|++||+.-.. +. .+.+...-+ |+ ..........||||||||++|||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAr 195 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLCVAR 195 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHHHHH
Confidence 46788999999999999899999996211 11 111111100 21 23345667899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
||+.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+++...
T Consensus 196 aL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~~~~~~~ 275 (286)
T PRK14275 196 TLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLFTNPKDR 275 (286)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCcH
Confidence 999999999999999999999999999999988777899999999999865 9999999999999999999998764433
Q ss_pred c
Q 040099 1227 Y 1227 (1236)
Q Consensus 1227 y 1227 (1236)
|
T Consensus 276 ~ 276 (286)
T PRK14275 276 M 276 (286)
T ss_pred H
Confidence 3
No 464
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-39 Score=364.57 Aligned_cols=208 Identities=27% Similarity=0.475 Sum_probs=179.3
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~~ 1082 (1236)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.++|.++.. .+.
T Consensus 39 ~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 39 VIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred eEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 4899999999974 359999999999999999999999999999999999997 689999999999864 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhh-----------hchHHHhhhhch----hhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMAN-----------ANGFISGLQEGY----DTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~-----------~~~~i~~lp~Gl----dt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++||||++.+|..|++||+..... +.+.++.+ |+ .........+||||||||++|||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~i~~~~~~~~~~LSgGe~qrv~LAr 193 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRA--ALWDEVKDQLDSSGLDLSGGQQQRLCIAR 193 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHc--CCCchhHHHHhCCcccCCHHHHHHHHHHH
Confidence 678899999999999998999999962211 11112111 22 23456777899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEE-EEeCCEEEEecChhHHhhc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIA-VVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~-Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. |||++ +|++|+|++.|+++++.++
T Consensus 194 aL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~~~ 270 (285)
T PRK14254 194 AIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIFEN 270 (285)
T ss_pred HHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999998777899999999999876 99975 5799999999999999765
No 465
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=360.48 Aligned_cols=215 Identities=30% Similarity=0.470 Sum_probs=182.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeecccC--Ch
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQKL--QV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~i--~~ 1082 (1236)
.++++||++.|++ .++|+|+||+|++||++||+||||||||||+++|.|+.+ |++|+|.+||.+++.. +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999974 358999999999999999999999999999999999975 3899999999998753 46
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhhc---------hHHHhhhh--ch----hhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANAN---------GFISGLQE--GY----DTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~---------~~i~~lp~--Gl----dt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||+|.+|+.|++||+....... ..+...-+ |+ ...++..+.+||||||||++|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~lar 159 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRLCIAR 159 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHHHH
Confidence 67899999999999999999999996221111 11111111 22 23356677899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++...+.+.
T Consensus 160 al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~~~~~~ 239 (250)
T PRK14266 160 TIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFINPKDK 239 (250)
T ss_pred HHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHhCCCCh
Confidence 999999999999999999999999999999998778999999999999876 8999999999999999999997665554
Q ss_pred c
Q 040099 1227 Y 1227 (1236)
Q Consensus 1227 y 1227 (1236)
|
T Consensus 240 ~ 240 (250)
T PRK14266 240 R 240 (250)
T ss_pred H
Confidence 4
No 466
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.8e-39 Score=355.06 Aligned_cols=204 Identities=35% Similarity=0.497 Sum_probs=172.8
Q ss_pred EEEEeEEEECCCCC-CCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHH---HHh
Q 040099 385 IELKDVNFSYPARP-DEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLK---WIR 460 (1236)
Q Consensus 385 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r 460 (1236)
++++|+++.|+... .+.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|+++|.++...+.. ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 25699999999999999999999999999999999999999999999999998776643 467
Q ss_pred cceEEEccCCCCCc-hhHHHHHhcCCC---CCCHH----HHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 461 EKIGLVSQEPVLLS-SSIRDNIAYGKT---HATKE----EIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 461 ~~i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
+.++|++|++.+|. .|+.||+.++.. ..+.+ ++.++++..+ ++......+.+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVG-----------LGDHLDYYPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcC-----------ChhhhhcChhhCCHHHHHHH
Confidence 88999999999987 699999987532 12222 2333444444 44444445568999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhhcCeEEEEECCEE
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRNANIIAVIQQGKI 599 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~ad~i~vl~~G~i 599 (1236)
+||||++++|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998863 7999999999997777999999999986
No 467
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=365.33 Aligned_cols=208 Identities=27% Similarity=0.473 Sum_probs=177.8
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc--CChHHHhcc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK--LQVKWLRQQ 1088 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~--i~~~~lR~~ 1088 (1236)
|+++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPDG--TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCCC--CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 6899999999732 358999999999999999999999999999999999999999999999999852 234567899
Q ss_pred eEEEcCCC--CCChhhHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEP--VLFSDTIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp--~LF~gTIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
|+|+||+| .+|..|++||+.-.. .+.+.++.+ |++.........||||||||++||||++++|+
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral~~~p~ 157 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGILAMKPE 157 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999998 578899999995110 011122211 34334445667899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 158 llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 158 IIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999875 47899999999999875 999999999999999999998764
No 468
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=361.09 Aligned_cols=198 Identities=32% Similarity=0.446 Sum_probs=173.0
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~~---~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGER---TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECCc---ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 59999999999743 5899999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEcCCCCCCh-hhHHHHHHHH------hhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCC
Q 040099 1090 GVVSQEPVLFS-DTIRANIAEM------ANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEAT 1162 (1236)
Q Consensus 1090 ~~V~Qdp~LF~-gTIreNL~~~------a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaT 1162 (1236)
+|++|++.+|+ .|++||+.-. ..+.++++.+ |++........+||||||||++|||||+++|++|||||||
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt 161 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAV--GLADRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPL 161 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 99999999987 6999998521 1122233322 5555667778899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChh
Q 040099 1163 SALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHE 1217 (1236)
Q Consensus 1163 SaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~ 1217 (1236)
++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 162 ~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 162 GALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999998864 37899999999999865 9999999999999998765
No 469
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=362.69 Aligned_cols=210 Identities=30% Similarity=0.471 Sum_probs=178.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~--i~~ 1082 (1236)
.++++||+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGSF---HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECCE---eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 48999999999743 589999999999999999999999999999999999974 69999999999853 455
Q ss_pred HHHhcceEEEcCCCCCCh-hhHHHHHHHHhhh---------chHHHhhhh--ch----hhhhcCCCCCCChhHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFS-DTIRANIAEMANA---------NGFISGLQE--GY----DTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~-gTIreNL~~~a~~---------~~~i~~lp~--Gl----dt~vge~G~~LSGGQrQRlaLA 1146 (1236)
..+|+.++|++|++.+|. .|++||+...... .+.+..+=+ |+ .........+||||||||++||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIA 160 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHH
Confidence 678899999999999997 5999998521111 111111111 22 3445667789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-hcCEEEEEe------CCEEEEecChhHH
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIK-NAHLIAVVS------QGMIVEKGSHESL 1219 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~-~aD~I~Vl~------~G~Ive~Gt~~eL 1219 (1236)
|||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|+ +|+|++.|+++++
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~~~~~ 240 (258)
T PRK14241 161 RAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDDTEKI 240 (258)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCCHHHH
Confidence 999999999999999999999999999999998876789999999999986 499999997 8999999999999
Q ss_pred hhc
Q 040099 1220 IST 1222 (1236)
Q Consensus 1220 l~~ 1222 (1236)
+..
T Consensus 241 ~~~ 243 (258)
T PRK14241 241 FSN 243 (258)
T ss_pred HhC
Confidence 765
No 470
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.5e-39 Score=363.85 Aligned_cols=221 Identities=25% Similarity=0.407 Sum_probs=181.7
Q ss_pred cEEEeEEEEECCCC------CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH
Q 040099 1010 EVQFLRVSFKYPTR------PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK 1083 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~ 1083 (1236)
-|+++||+++|+.+ ...++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999632 123699999999999999999999999999999999999999999999999999765666
Q ss_pred HHhcceEEEcCCCC--CCh-hhHHHHHHHHh-------------hhchHHHhhhhchh-hhhcCCCCCCChhHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPV--LFS-DTIRANIAEMA-------------NANGFISGLQEGYD-TLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~--LF~-gTIreNL~~~a-------------~~~~~i~~lp~Gld-t~vge~G~~LSGGQrQRlaLA 1146 (1236)
..|++++|+||+|. ++. -|+.+|+.... .+.+.++.+ |++ ........+||||||||++||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~la 161 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQV--GLLPDHASYYPHMLAPGQKQRLGLA 161 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHc--CCChHHHhcCchhcCHHHHHHHHHH
Confidence 66788999999985 444 38888874111 111122221 332 222345578999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcc
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTK 1223 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~ 1223 (1236)
|||+++|+||||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 162 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 241 (267)
T PRK15112 162 RALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVLASP 241 (267)
T ss_pred HHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHhcCC
Confidence 999999999999999999999999999999998753 7899999999999986 9999999999999999999998753
Q ss_pred -CcccHHhhh
Q 040099 1224 -NGIYTSLIE 1232 (1236)
Q Consensus 1224 -~g~y~~L~~ 1232 (1236)
+..+++++.
T Consensus 242 ~~~~~~~~~~ 251 (267)
T PRK15112 242 LHELTKRLIA 251 (267)
T ss_pred CCHHHHHHHH
Confidence 344556664
No 471
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.7e-39 Score=355.88 Aligned_cols=202 Identities=30% Similarity=0.433 Sum_probs=172.4
Q ss_pred cEEEeEEEEECCCCCC-cccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHH---H
Q 040099 1010 EVQFLRVSFKYPTRPH-IEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKW---L 1085 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~-~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~---l 1085 (1236)
-|+++||+++|++... .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999975321 25899999999999999999999999999999999999999999999999998877643 2
Q ss_pred -hcceEEEcCCCCCChh-hHHHHHHHHh------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1086 -RQQMGVVSQEPVLFSD-TIRANIAEMA------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1086 -R~~i~~V~Qdp~LF~g-TIreNL~~~a------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
++.++|+||+|.+|.. |++||+.... .+.+++..+ |++.........||||||||++|||||++
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la~al~~ 163 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALARAFNG 163 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 3689999999999875 9999985211 112222222 44444556677899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhhcCEEEEEeCCEEEEe
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKNAHLIAVVSQGMIVEK 1213 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~aD~I~Vl~~G~Ive~ 1213 (1236)
+|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+..||+|++|++|+++|.
T Consensus 164 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 164 RPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999988743 6899999999999988999999999999874
No 472
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-39 Score=352.26 Aligned_cols=186 Identities=33% Similarity=0.540 Sum_probs=166.8
Q ss_pred EEEeEEEEECCCCCC--cccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcc
Q 040099 1011 VQFLRVSFKYPTRPH--IEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQ 1088 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~--~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~ 1088 (1236)
|+++||+++|+++.+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999975321 3599999999999999999999999999999999999999999999999 6
Q ss_pred eEEEcCCCCCChhhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEPVLFSDTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp~LF~gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
|+|+||+|.+|++|++||+. +.+++.+++..+|.|+++.+++.+.+||||||||++|||||+.+|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999984 1224456677888899999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHH-HHHHHc-CCCeEEEEecCchhhhhcCEEEEEeCCE
Q 040099 1155 ILLLDEATSALDIESERVVQD-ALDQVM-VDRTTLVVAHRLSTIKNAHLIAVVSQGM 1209 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~-~L~~~~-~~~TvI~IaHRl~ti~~aD~I~Vl~~G~ 1209 (1236)
++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999888877 456553 4689999999999998899999999985
No 473
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.6e-39 Score=353.94 Aligned_cols=195 Identities=33% Similarity=0.509 Sum_probs=168.8
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeeccc--CChHHHhcc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQK--LQVKWLRQQ 1088 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~--i~~~~lR~~ 1088 (1236)
|+++||+++|+++ ++|+++||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~~---~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGDF---HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECCe---EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 4789999999753 58999999999999999999999999999999999999999999999999853 455678899
Q ss_pred eEEEcCCCCCCh-hhHHHHHHHHh----h---------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1089 MGVVSQEPVLFS-DTIRANIAEMA----N---------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1089 i~~V~Qdp~LF~-gTIreNL~~~a----~---------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
++|+||+|.+|. .|++||+.... + +.+.++.+ |++..+.....+||||||||++||||++++|+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 155 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALAMNPK 155 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHHhcCCC
Confidence 999999999986 69999985211 1 11222222 56666667778999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEE
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMI 1210 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~I 1210 (1236)
+|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|+|
T Consensus 156 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 156 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999875 47899999999999965 999999999975
No 474
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.9e-39 Score=370.99 Aligned_cols=194 Identities=25% Similarity=0.460 Sum_probs=169.5
Q ss_pred cccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEEEcCCCCCChh-hHH
Q 040099 1026 IEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGVVSQEPVLFSD-TIR 1104 (1236)
Q Consensus 1026 ~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~V~Qdp~LF~g-TIr 1104 (1236)
.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 358999999999999999999999999999999999999999999999999976 345678999999999999876 999
Q ss_pred HHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHH
Q 040099 1105 ANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSALDIESERV 1172 (1236)
Q Consensus 1105 eNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~ 1172 (1236)
||+.-.+. +.++++.+ |++........+||||||||++|||||+++|++|||||||++||+.+.+.
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~ 162 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRA 162 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHH
Confidence 99952221 12222222 44444556667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1173 VQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1173 I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+++.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 163 l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 163 IWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999875 46899999999999975 999999999999999999999765
No 475
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.7e-39 Score=361.92 Aligned_cols=206 Identities=28% Similarity=0.447 Sum_probs=180.2
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceE
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMG 1090 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~ 1090 (1236)
++++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 2 l~~~~l~~~~~~~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGGR---LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECCE---EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 6899999999743 5999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEcCCCC-CChhhHHHHHHHH---h-------------hhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCC
Q 040099 1091 VVSQEPV-LFSDTIRANIAEM---A-------------NANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEP 1153 (1236)
Q Consensus 1091 ~V~Qdp~-LF~gTIreNL~~~---a-------------~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p 1153 (1236)
|+||++. .+..|++||+... . .+.+.+..+ |+..........||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999985 4567999999521 0 011122222 4554556677899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHcC-CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhh
Q 040099 1154 KILLLDEATSALDIESERVVQDALDQVMV-DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1154 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~-~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999998753 689999999999995 599999999999999999999865
No 476
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.1e-39 Score=353.26 Aligned_cols=195 Identities=34% Similarity=0.545 Sum_probs=166.6
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH---HHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK---WLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~---~lR~ 1087 (1236)
++++|++++|+.+ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~~--~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPGG--VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCCC--ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 6899999999532 3599999999999999999999999999999999999999999999999999877643 4688
Q ss_pred ceEEEcCCCCCCh-hhHHHHHHHHhh------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1088 QMGVVSQEPVLFS-DTIRANIAEMAN------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~-gTIreNL~~~a~------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
.++|+||+|.+|. .|++||+.-... +.++++.+ |++........+||||||||++|||||+++|+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQV--GLEHKADAFPEQLSGGEQQRVAIARAIVNSPP 157 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999986 699999852211 11122211 34334445567899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCE
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGM 1209 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~ 1209 (1236)
+|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 158 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 158 LLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999875 47899999999999976 99999999985
No 477
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=362.86 Aligned_cols=209 Identities=29% Similarity=0.436 Sum_probs=182.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcce
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQM 1089 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i 1089 (1236)
.|+++||+++|+++ .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+++.+
T Consensus 7 ~l~i~~l~~~~~~~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 7 RLRGEQLTLGYGKY---TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEEEECCE---EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 68999999999743 589999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEcCCCCCCh-hhHHHHHHHHh-h-----------hchHHHh-hh-hchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1090 GVVSQEPVLFS-DTIRANIAEMA-N-----------ANGFISG-LQ-EGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1090 ~~V~Qdp~LF~-gTIreNL~~~a-~-----------~~~~i~~-lp-~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
+|+||++.+|. .|++||+.... . ..+.+.. +. -|++.........||||||||++||||++++|+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~ 163 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETA 163 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHhcCCC
Confidence 99999998875 69999985210 0 0011111 11 155555667788999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
+|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 164 llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 164 IMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 9999999999999999999999998753 7899999999998865 99999999999999999999865
No 478
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-39 Score=354.70 Aligned_cols=192 Identities=28% Similarity=0.483 Sum_probs=163.5
Q ss_pred EEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChHHHhcceEE
Q 040099 1012 QFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVKWLRQQMGV 1091 (1236)
Q Consensus 1012 ~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~~lR~~i~~ 1091 (1236)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36799999974 35899999999999999999999999999999999999999999999998875 46889999
Q ss_pred EcCCCCC---ChhhHHHHHHHHhh----------------hchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccC
Q 040099 1092 VSQEPVL---FSDTIRANIAEMAN----------------ANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKE 1152 (1236)
Q Consensus 1092 V~Qdp~L---F~gTIreNL~~~a~----------------~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~ 1152 (1236)
|||+|.+ |+.|++||+..... +.++++.+ |++........+||||||||++|||||+++
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~ 150 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERV--GLSELADRQIGELSGGQQQRVLLARALVQD 150 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999976 66899999852111 11112211 455455667789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEEec
Q 040099 1153 PKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1153 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~G 1214 (1236)
|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 151 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 151 PDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999875 57899999999999965 9999999886 55654
No 479
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=347.68 Aligned_cols=211 Identities=32% Similarity=0.494 Sum_probs=178.8
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCe---ecccCChHHHh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGV---EIQKLQVKWLR 1086 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~---di~~i~~~~lR 1086 (1236)
.|+++|++..|+.. ++++|||++|+.||.+|+.||||||||||+++|.|+..|++|.|.+||. |.++++.+ .
T Consensus 2 ~i~i~~~~~~~~~~---~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~ 76 (345)
T COG1118 2 SIRINNVKKRFGAF---GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--D 76 (345)
T ss_pred ceeehhhhhhcccc---cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--h
Confidence 47888999999754 5899999999999999999999999999999999999999999999999 77774443 4
Q ss_pred cceEEEcCCCCCCh-hhHHHHHH--------------HHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHcc
Q 040099 1087 QQMGVVSQEPVLFS-DTIRANIA--------------EMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVK 1151 (1236)
Q Consensus 1087 ~~i~~V~Qdp~LF~-gTIreNL~--------------~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr 1151 (1236)
++||+|+|+..||. .||++||+ ..+++.++++-. .++-.-..-..+||||||||+||||||..
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lv--qL~~la~ryP~QLSGGQrQRVALARALA~ 154 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLV--QLEGLADRYPAQLSGGQRQRVALARALAV 154 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHh--cccchhhcCchhcChHHHHHHHHHHHhhc
Confidence 68999999999986 59999996 122222322211 12222234567999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccCccc
Q 040099 1152 EPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKNGIY 1227 (1236)
Q Consensus 1152 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~y 1227 (1236)
.|++|+||||.++||+.-.+.+++-|++... +.|+++|||+.+.+.. ||||+||++|+|...|+|+|....+++.|
T Consensus 155 eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~f 233 (345)
T COG1118 155 EPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASRF 233 (345)
T ss_pred CCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCccc
Confidence 9999999999999999999999999988653 7899999999999855 99999999999999999999998877665
No 480
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1e-38 Score=403.15 Aligned_cols=103 Identities=31% Similarity=0.515 Sum_probs=93.5
Q ss_pred chhh-hhcCCCCCCChhHHHHHHHHHHHccCC---CEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhh
Q 040099 1123 GYDT-LVGERGVQLSGGQKQRVAIARAIVKEP---KILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIK 1197 (1236)
Q Consensus 1123 Gldt-~vge~G~~LSGGQrQRlaLARALlr~p---~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~ 1197 (1236)
|++. .++.....||||||||++|||+|+++| +++||||||++||+.+...+.+.|+++. ++.|+|+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 4543 367778899999999999999999999 9999999999999999999999999875 5789999999999999
Q ss_pred hcCEEEEE------eCCEEEEecChhHHhhccCc
Q 040099 1198 NAHLIAVV------SQGMIVEKGSHESLISTKNG 1225 (1236)
Q Consensus 1198 ~aD~I~Vl------~~G~Ive~Gt~~eLl~~~~g 1225 (1236)
.||+|++| ++|+|++.|+++++.+.+++
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s 931 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEAS 931 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCccc
Confidence 99999999 79999999999999987544
No 481
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=360.29 Aligned_cols=214 Identities=26% Similarity=0.454 Sum_probs=181.3
Q ss_pred ccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCC-----CcEEEECCeeccc--CC
Q 040099 1009 GEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPS-----SGHITLDGVEIQK--LQ 1081 (1236)
Q Consensus 1009 g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~-----~G~I~idG~di~~--i~ 1081 (1236)
+.|+++||+++|+++ .+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.|+.. .+
T Consensus 6 ~~l~~~nl~~~~~~~---~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDTQ---KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCCe---eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 469999999999743 4899999999999999999999999999999999999985 8999999999853 35
Q ss_pred hHHHhcceEEEcCCCCCChhhHHHHHHHHhhh---------chHHH----hh--hhchhhhhcCCCCCCChhHHHHHHHH
Q 040099 1082 VKWLRQQMGVVSQEPVLFSDTIRANIAEMANA---------NGFIS----GL--QEGYDTLVGERGVQLSGGQKQRVAIA 1146 (1236)
Q Consensus 1082 ~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~---------~~~i~----~l--p~Gldt~vge~G~~LSGGQrQRlaLA 1146 (1236)
...+|+.++|+||++.+|..|++||+...... .+.+. .+ .+.++...+..+..||||||||++||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~la 162 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIA 162 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHH
Confidence 56788999999999999999999999522111 01111 11 11123345677789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEecCchhhhh-cCEEEEEeC-----CEEEEecChhH
Q 040099 1147 RAIVKEPKILLLDEATSALDIESERVVQDALDQVM--VDRTTLVVAHRLSTIKN-AHLIAVVSQ-----GMIVEKGSHES 1218 (1236)
Q Consensus 1147 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~~~TvI~IaHRl~ti~~-aD~I~Vl~~-----G~Ive~Gt~~e 1218 (1236)
|||+++|++|||||||++||+++...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |++++.|++++
T Consensus 163 ral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~ 242 (261)
T PRK14258 163 RALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFGLTKK 242 (261)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeCCHHH
Confidence 99999999999999999999999999999999853 47999999999999865 999999999 99999999999
Q ss_pred HhhccCc
Q 040099 1219 LISTKNG 1225 (1236)
Q Consensus 1219 Ll~~~~g 1225 (1236)
+...+..
T Consensus 243 ~~~~~~~ 249 (261)
T PRK14258 243 IFNSPHD 249 (261)
T ss_pred HHhCCCC
Confidence 9875443
No 482
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=359.07 Aligned_cols=219 Identities=29% Similarity=0.499 Sum_probs=183.7
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECC------eecccCChH
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDG------VEIQKLQVK 1083 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG------~di~~i~~~ 1083 (1236)
-++++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 10 ~i~~~~~~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYINDK---AILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCCc---eeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 58999999999753 589999999999999999999999999999999999999987666655 677777777
Q ss_pred HHhcceEEEcCCCCCChh-hHHHHHHHHhhhch---------HHHh-hhh-chh----hhhcCCCCCCChhHHHHHHHHH
Q 040099 1084 WLRQQMGVVSQEPVLFSD-TIRANIAEMANANG---------FISG-LQE-GYD----TLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1084 ~lR~~i~~V~Qdp~LF~g-TIreNL~~~a~~~~---------~i~~-lp~-Gld----t~vge~G~~LSGGQrQRlaLAR 1147 (1236)
.+|++++|+||+|.+|.+ |++||+.-...... .+.. +.. |++ ...+..+..||||||||++|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~lar 166 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTIAR 166 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHHHH
Confidence 889999999999999976 99999962211110 0111 111 332 2345677889999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhh-hcCEEEEEeCCEEEEecChhHHhhccCcc
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGSHESLISTKNGI 1226 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt~~eLl~~~~g~ 1226 (1236)
|++++|++|||||||++||+.++..+.+.|+++.+++|+|+|||+++.+. .||++++|++|++++.|+++++.+.+...
T Consensus 167 al~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~~~~~~ 246 (257)
T PRK14246 167 ALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFTSPKNE 246 (257)
T ss_pred HHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCcH
Confidence 99999999999999999999999999999998877799999999999995 59999999999999999999998765544
Q ss_pred cHHhh
Q 040099 1227 YTSLI 1231 (1236)
Q Consensus 1227 y~~L~ 1231 (1236)
|.+.+
T Consensus 247 ~~~~~ 251 (257)
T PRK14246 247 LTEKY 251 (257)
T ss_pred HHHHH
Confidence 55443
No 483
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-39 Score=348.12 Aligned_cols=191 Identities=23% Similarity=0.376 Sum_probs=163.6
Q ss_pred cEEEEeEEEECCCC-CCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCC---CCCcEEEECCeecCCCCHHHH
Q 040099 384 DIELKDVNFSYPAR-PDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYD---PQAGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~ 459 (1236)
.+.++||+|.|+.. +++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 37899999999853 35679999999999999999999999999999999999999 89999999999987664 356
Q ss_pred hcceEEEccCCCCCch-hHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHh
Q 040099 460 REKIGLVSQEPVLLSS-SIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAM 538 (1236)
Q Consensus 460 r~~i~~v~Q~~~l~~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal 538 (1236)
+++++|++|++.+|.. |++||+.++... . ..+....||||||||++|||||
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~------~----------------------~~~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC------K----------------------GNEFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh------c----------------------cccchhhCCHHHHHHHHHHHHH
Confidence 7789999999988875 999999875310 0 2234458999999999999999
Q ss_pred cCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEec-CchhHh-hcCeEEEEECCEEEEEe
Q 040099 539 IKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSH-RLSLIR-NANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 539 ~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH-~~~~~~-~ad~i~vl~~G~i~~~g 603 (1236)
+++|++|||||||++||+.+++.+.+.|+++.+ +.|+|+++| +.+.+. .||++++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999999998854 467676655 456664 59999999999998764
No 484
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.6e-39 Score=361.72 Aligned_cols=225 Identities=27% Similarity=0.420 Sum_probs=183.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCee-----cCCCCHHH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVN-----LKEFQLKW 458 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~-----~~~~~~~~ 458 (1236)
-|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYGG---GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeCC---ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 4899999999963 358999999999999999999999999999999999999999999999987 66665543
Q ss_pred ----HhcceEEEccCCC--CC-chhHHHHHhcCC---CCCCHHHHHHHHHHhccHHHHHhCCCCcc-ccccCCCCCCChH
Q 040099 459 ----IREKIGLVSQEPV--LL-SSSIRDNIAYGK---THATKEEIQAAAEAANASHFIKNLPQGLD-TNVGEHGIQLSGG 527 (1236)
Q Consensus 459 ----~r~~i~~v~Q~~~--l~-~~ti~~ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~g~~g~~LSgG 527 (1236)
+++.++|++|++. ++ ..|+.+|+.+.. ......+. ...+.+++..+ |++ +.....+..||||
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG 152 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGG 152 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHH
Confidence 3467999999984 33 348888886421 00011111 12234566666 454 4667778899999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeC
Q 040099 528 QKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 528 qkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~ 604 (1236)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+ +.|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 153 ~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 153 MQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999988743 7899999999999975 99999999999999999
Q ss_pred cccccccccchhhh
Q 040099 605 HSELLENPYGAYNR 618 (1236)
Q Consensus 605 ~~~l~~~~~~~y~~ 618 (1236)
++++..++...|.+
T Consensus 233 ~~~~~~~~~~~~~~ 246 (253)
T TIGR02323 233 TDQVLDDPQHPYTQ 246 (253)
T ss_pred HHHHhcCCCCHHHH
Confidence 99887654444443
No 485
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.3e-38 Score=401.47 Aligned_cols=99 Identities=29% Similarity=0.461 Sum_probs=89.2
Q ss_pred Ccccc-ccCCCCCCChHHHHHHHHHHHhcCCC--CEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh
Q 040099 512 GLDTN-VGEHGIQLSGGQKQRVAIARAMIKDP--RILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN 587 (1236)
Q Consensus 512 g~~t~-~g~~g~~LSgGqkqRiaiARal~~~p--~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~ 587 (1236)
|++.. .+....+|||||+|||+|||||..+| ++|||||||++||+.....+.+.|+++. +|.|+|+|+|+++.+..
T Consensus 475 gL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~~~i~~ 554 (924)
T TIGR00630 475 GLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDEETIRA 554 (924)
T ss_pred cccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHhh
Confidence 66544 67788899999999999999999986 8999999999999999999999999885 47899999999999999
Q ss_pred cCeEEEE------ECCEEEEEeCcccccc
Q 040099 588 ANIIAVI------QQGKIVEKGTHSELLE 610 (1236)
Q Consensus 588 ad~i~vl------~~G~i~~~g~~~~l~~ 610 (1236)
||+|++| ++|+|+++|+++++..
T Consensus 555 aD~vi~LgpgaG~~~G~Iv~~g~~~el~~ 583 (924)
T TIGR00630 555 ADYVIDIGPGAGIHGGEVVASGTPEEILA 583 (924)
T ss_pred CCEEEEecccccCCCCEEeeccCHHHHhc
Confidence 9999999 8999999998777643
No 486
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.2e-39 Score=359.73 Aligned_cols=215 Identities=27% Similarity=0.427 Sum_probs=178.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCC----CCcEEEECCeecCCCCHHHH
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDP----QAGEVLIDGVNLKEFQLKWI 459 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~----~~G~i~~~g~~~~~~~~~~~ 459 (1236)
.|+++|++|+| + +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... ...
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 999999999988632 223
Q ss_pred hcceEEEccCCC-CCc--hhHHHHHhcC----CCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 040099 460 REKIGLVSQEPV-LLS--SSIRDNIAYG----KTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRV 532 (1236)
Q Consensus 460 r~~i~~v~Q~~~-l~~--~ti~~ni~~g----~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRi 532 (1236)
++.++||+|++. .|. .|+.+|+.+. .....++++.++++..++.++ ++.++..+.+||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999984 343 4888887542 111223455555655554321 1245666779999999999
Q ss_pred HHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEeCccccc
Q 040099 533 AIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGTHSELL 609 (1236)
Q Consensus 533 aiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 609 (1236)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999864 9999999999999999999987
Q ss_pred ccc
Q 040099 610 ENP 612 (1236)
Q Consensus 610 ~~~ 612 (1236)
..+
T Consensus 230 ~~~ 232 (254)
T PRK10418 230 NAP 232 (254)
T ss_pred hCC
Confidence 653
No 487
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-40 Score=321.98 Aligned_cols=220 Identities=32% Similarity=0.545 Sum_probs=184.6
Q ss_pred cEEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC----------
Q 040099 384 DIELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE---------- 453 (1236)
Q Consensus 384 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~---------- 453 (1236)
.++++|+.++|.. ..||++||++.++|+.+.|+|.|||||||++++|.=+..|+.|+|.++|..++-
T Consensus 6 ~l~v~dlHK~~G~---~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhccc---chhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 5899999999963 469999999999999999999999999999999999999999999999988742
Q ss_pred CC---HHHHhcceEEEccCCCCCc-hhHHHHHhcCCC---CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCCh
Q 040099 454 FQ---LKWIREKIGLVSQEPVLLS-SSIRDNIAYGKT---HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSG 526 (1236)
Q Consensus 454 ~~---~~~~r~~i~~v~Q~~~l~~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSg 526 (1236)
.+ .+.+|.+.|+|+|+..|++ .||.||+.-+.- ..+..+..+.+ ..++.+. |+.......+..|||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~A-----e~~L~kV--Gi~ek~~~YP~~LSG 155 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERA-----EKYLAKV--GIAEKADAYPAHLSG 155 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHH-----HHHHHHh--CchhhhhcCccccCc
Confidence 12 3457899999999999986 599999974321 11222222211 1233333 555555566679999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHhh-cCeEEEEECCEEEEEeC
Q 040099 527 GQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKGT 604 (1236)
Q Consensus 527 GqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g~ 604 (1236)
||+||+||||||..+|+++++|||||||||+---.+.+.++++. +|||.++|||.+.+.++ +.+++.|++|.|-|+|+
T Consensus 156 GQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~ 235 (256)
T COG4598 156 GQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGP 235 (256)
T ss_pred hHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCC
Confidence 99999999999999999999999999999999999999998886 58999999999999988 89999999999999999
Q ss_pred ccccccccc
Q 040099 605 HSELLENPY 613 (1236)
Q Consensus 605 ~~~l~~~~~ 613 (1236)
++++..+|.
T Consensus 236 P~qvf~nP~ 244 (256)
T COG4598 236 PEQVFGNPQ 244 (256)
T ss_pred hHHHhcCCC
Confidence 999998753
No 488
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.6e-39 Score=352.39 Aligned_cols=198 Identities=31% Similarity=0.482 Sum_probs=168.8
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCChH---HHhc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQVK---WLRQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~~---~lR~ 1087 (1236)
|+++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+++.. .+|+
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLGG--RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecCC--CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 6899999999532 3589999999999999999999999999999999999999999999999999877654 3688
Q ss_pred ceEEEcCCCCCC-hhhHHHHHHHHh---hh---------chHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCC
Q 040099 1088 QMGVVSQEPVLF-SDTIRANIAEMA---NA---------NGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPK 1154 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF-~gTIreNL~~~a---~~---------~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ 1154 (1236)
.++|+||+|.+| ..|++||+.-.. +. .++++.+ |++........+||||||||++||||++++|+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAVVNKPA 157 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 999999999874 679999995211 11 1122211 34444556678999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh-cCEEEEEeCCEEEE
Q 040099 1155 ILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVE 1212 (1236)
Q Consensus 1155 ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive 1212 (1236)
+|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 158 VLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999874 46899999999999976 89999999999853
No 489
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-39 Score=360.29 Aligned_cols=212 Identities=26% Similarity=0.429 Sum_probs=182.1
Q ss_pred cccEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeecc----
Q 040099 1008 MGEVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQ---- 1078 (1236)
Q Consensus 1008 ~g~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~---- 1078 (1236)
.+.|+++|++++|+++ ++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 14 ~~~l~~~~l~~~~~~~---~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGGY---QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECCe---eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 4679999999999743 599999999999999999999999999999999999875 7999999998874
Q ss_pred cCChHHHhcceEEEcCCCCCChhhHHHHHHHHhhh---------chHHHh------hhhchhhhhcCCCCCCChhHHHHH
Q 040099 1079 KLQVKWLRQQMGVVSQEPVLFSDTIRANIAEMANA---------NGFISG------LQEGYDTLVGERGVQLSGGQKQRV 1143 (1236)
Q Consensus 1079 ~i~~~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~---------~~~i~~------lp~Gldt~vge~G~~LSGGQrQRl 1143 (1236)
..+...+|+.++|+||+|.+|.+|++||+...... .+.+.. +.+++....+.....||||||||+
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv 170 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQRL 170 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHHH
Confidence 33456788999999999999999999999521110 111111 112334556677889999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 040099 1144 AIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIST 1222 (1236)
Q Consensus 1144 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~ 1222 (1236)
+|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 171 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 250 (265)
T PRK14252 171 CIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGATDTIFIK 250 (265)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999998777899999999999965 999999999999999999999764
No 490
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-39 Score=347.01 Aligned_cols=191 Identities=24% Similarity=0.367 Sum_probs=164.0
Q ss_pred cEEEeEEEEECCCC-CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC---CCCcEEEECCeecccCChHHH
Q 040099 1010 EVQFLRVSFKYPTR-PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD---PSSGHITLDGVEIQKLQVKWL 1085 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~-~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~---~~~G~I~idG~di~~i~~~~l 1085 (1236)
.+.++||+|.|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 36899999999853 34579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcceEEEcCCCCCChh-hHHHHHHHHhhhchHHHhhhhchhhhhcCCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCC
Q 040099 1086 RQQMGVVSQEPVLFSD-TIRANIAEMANANGFISGLQEGYDTLVGERGVQLSGGQKQRVAIARAIVKEPKILLLDEATSA 1164 (1236)
Q Consensus 1086 R~~i~~V~Qdp~LF~g-TIreNL~~~a~~~~~i~~lp~Gldt~vge~G~~LSGGQrQRlaLARALlr~p~ILlLDEaTSa 1164 (1236)
|++++|+||++.+|.. |++||+.-.+... ..+....||||||||++|||||+++|++|||||||++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------~~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~ 148 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRCK-------------GNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRG 148 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhhc-------------cccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCcc
Confidence 8899999999988875 9999995322211 2344567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcC--CCeEEEEe-cCchhh-hhcCEEEEEeCCEEEEec
Q 040099 1165 LDIESERVVQDALDQVMV--DRTTLVVA-HRLSTI-KNAHLIAVVSQGMIVEKG 1214 (1236)
Q Consensus 1165 LD~~te~~I~~~L~~~~~--~~TvI~Ia-HRl~ti-~~aD~I~Vl~~G~Ive~G 1214 (1236)
||+++.+.+.+.|++..+ ++|+|+++ |+++.+ +.||+|++|++|++++.|
T Consensus 149 LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 149 LDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999998754 46766665 555666 459999999999998865
No 491
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.4e-39 Score=357.97 Aligned_cols=208 Identities=26% Similarity=0.410 Sum_probs=173.1
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcc--cCCCCcEEEECCeecccCChHHH-hc
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRF--YDPSSGHITLDGVEIQKLQVKWL-RQ 1087 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~--~~~~~G~I~idG~di~~i~~~~l-R~ 1087 (1236)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999974 3589999999999999999999999999999999999 47999999999999988876554 45
Q ss_pred ceEEEcCCCCCChh-hHHHHHHHHhhh------------chHHHhhhh-----chhh-hhcCCCC-CCChhHHHHHHHHH
Q 040099 1088 QMGVVSQEPVLFSD-TIRANIAEMANA------------NGFISGLQE-----GYDT-LVGERGV-QLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1088 ~i~~V~Qdp~LF~g-TIreNL~~~a~~------------~~~i~~lp~-----Gldt-~vge~G~-~LSGGQrQRlaLAR 1147 (1236)
.++||||+|.+|.+ |++||+...... .++.....+ |++. ....... .||||||||++|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~ 157 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQ 157 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHH
Confidence 69999999998876 899998522110 111111111 3432 2233333 59999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEecCchhhhh--cCEEEEEeCCEEEEecChhHHhh
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVM-VDRTTLVVAHRLSTIKN--AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~--aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++-.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (243)
T TIGR01978 158 MALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAKE 234 (243)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhcc
Confidence 9999999999999999999999999999999875 46899999999999976 79999999999999999986643
No 492
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-39 Score=358.53 Aligned_cols=212 Identities=31% Similarity=0.426 Sum_probs=180.2
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCC-----CCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDP-----SSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~-----~~G~I~idG~di~~--i~~ 1082 (1236)
.+.+++.+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .+.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4788999999964 3589999999999999999999999999999999999986 79999999999864 344
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhh-----------hchHHHhh--hhchhhhhcCCCCCCChhHHHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMAN-----------ANGFISGL--QEGYDTLVGERGVQLSGGQKQRVAIARAI 1149 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~-----------~~~~i~~l--p~Gldt~vge~G~~LSGGQrQRlaLARAL 1149 (1236)
..+|+.++|+||+|.+|..|++||+..... +.+.++.+ ...++...++...+||||||||++|||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~laral 164 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCIARAI 164 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHH
Confidence 567889999999999999999999962211 11122211 11122344567789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEe--------CCEEEEecChhHHh
Q 040099 1150 VKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVS--------QGMIVEKGSHESLI 1220 (1236)
Q Consensus 1150 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~--------~G~Ive~Gt~~eLl 1220 (1236)
+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|++++.|++++++
T Consensus 165 ~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 165 ATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred HcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCHHHHH
Confidence 9999999999999999999999999999998777899999999999865 99999996 89999999999998
Q ss_pred hccC
Q 040099 1221 STKN 1224 (1236)
Q Consensus 1221 ~~~~ 1224 (1236)
+++.
T Consensus 245 ~~~~ 248 (261)
T PRK14263 245 QNPR 248 (261)
T ss_pred hCCC
Confidence 7543
No 493
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4e-39 Score=353.11 Aligned_cols=205 Identities=27% Similarity=0.436 Sum_probs=175.4
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++||+++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ++.++
T Consensus 1 l~l~~v~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGK---QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIG 73 (223)
T ss_pred CEEEeEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEE
Confidence 478999999963 46999999999999999999999999999999999999999999999999875322 25799
Q ss_pred EEccCCCCCc-hhHHHHHhcCCC--CCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCC
Q 040099 465 LVSQEPVLLS-SSIRDNIAYGKT--HATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKD 541 (1236)
Q Consensus 465 ~v~Q~~~l~~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~ 541 (1236)
|++|++.+|. .|++||+.++.. ...++++.++++..++.+.. .....+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~~rv~laral~~~ 142 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTG-----------KKKAKQFSLGMKQRLGIAIALLNH 142 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHH-----------hhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 599999986421 22345566666666555443 334458999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHHc-cCceEEEEecCchhHh-hcCeEEEEECCEEEEEeCccc
Q 040099 542 PRILLLDEATSALDSESGRMVQEALDRVM-INRTTVIVSHRLSLIR-NANIIAVIQQGKIVEKGTHSE 607 (1236)
Q Consensus 542 p~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~ad~i~vl~~G~i~~~g~~~~ 607 (1236)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 143 p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 143 PKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999999999885 4789999999999986 499999999999999998654
No 494
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-39 Score=360.54 Aligned_cols=208 Identities=28% Similarity=0.441 Sum_probs=181.4
Q ss_pred EEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCC--------CcEEEECCeecccCCh
Q 040099 1011 VQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPS--------SGHITLDGVEIQKLQV 1082 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~--------~G~I~idG~di~~i~~ 1082 (1236)
++++|++++|+.+ ++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~~---~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRHR---AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECCE---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 6899999999643 5899999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEcCCCC-CChhhHHHHHHHHh-------h-----hchHHHh-h-hhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPV-LFSDTIRANIAEMA-------N-----ANGFISG-L-QEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~-LF~gTIreNL~~~a-------~-----~~~~i~~-l-p~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|+.++|+||++. +|..|++||+.... + ..+.+.. + .-|+++.++.....||||||||++|||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lar 158 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFAR 158 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHH
Confidence 888889999999985 57889999985210 0 0011111 1 126777778888999999999999999
Q ss_pred HHc---------cCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhh-hcCEEEEEeCCEEEEecC
Q 040099 1148 AIV---------KEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIK-NAHLIAVVSQGMIVEKGS 1215 (1236)
Q Consensus 1148 ALl---------r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~-~aD~I~Vl~~G~Ive~Gt 1215 (1236)
||+ .+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|+|++.|+
T Consensus 159 al~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~ 238 (272)
T PRK13547 159 VLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHGA 238 (272)
T ss_pred HHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEecC
Confidence 999 59999999999999999999999999998753 689999999999996 499999999999999999
Q ss_pred hhHHhh
Q 040099 1216 HESLIS 1221 (1236)
Q Consensus 1216 ~~eLl~ 1221 (1236)
+++++.
T Consensus 239 ~~~~~~ 244 (272)
T PRK13547 239 PADVLT 244 (272)
T ss_pred HHHHcC
Confidence 999865
No 495
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-39 Score=357.77 Aligned_cols=212 Identities=29% Similarity=0.419 Sum_probs=179.4
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC--C---CCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD--P---SSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~--~---~~G~I~idG~di~~--i~~ 1082 (1236)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999974 358999999999999999999999999999999999975 4 58999999999864 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhhhc---------hHH----Hh--hhhchhhhhcCCCCCCChhHHHHHHHHH
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMANAN---------GFI----SG--LQEGYDTLVGERGVQLSGGQKQRVAIAR 1147 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~~~---------~~i----~~--lp~Gldt~vge~G~~LSGGQrQRlaLAR 1147 (1236)
..+|++++|+||+|.+|..|+++|+.-..... +.+ +. +.+++.........+||||||||++|||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~lar 161 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCIAR 161 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHHHH
Confidence 57788999999999999999999995211110 111 11 1112233455677899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhhccC
Q 040099 1148 AIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLISTKN 1224 (1236)
Q Consensus 1148 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~~~~ 1224 (1236)
||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+....+.
T Consensus 162 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 239 (252)
T PRK14255 162 VLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFLNPK 239 (252)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCC
Confidence 999999999999999999999999999999988767899999999999965 99999999999999999999987543
No 496
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.3e-39 Score=360.52 Aligned_cols=216 Identities=32% Similarity=0.489 Sum_probs=183.4
Q ss_pred EEEeEEEEECCCC------CCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccCCCCcEEEECCeecccCCh--
Q 040099 1011 VQFLRVSFKYPTR------PHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYDPSSGHITLDGVEIQKLQV-- 1082 (1236)
Q Consensus 1011 I~f~~Vsf~Y~~~------~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~~~~G~I~idG~di~~i~~-- 1082 (1236)
|+++||+++|+.. .+.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 7899999999731 02469999999999999999999999999999999999999999999999999987765
Q ss_pred -HHHhcceEEEcCCCC--CC-hhhHHHHHHHH-------------hhhchHHHhhhhchhh-hhcCCCCCCChhHHHHHH
Q 040099 1083 -KWLRQQMGVVSQEPV--LF-SDTIRANIAEM-------------ANANGFISGLQEGYDT-LVGERGVQLSGGQKQRVA 1144 (1236)
Q Consensus 1083 -~~lR~~i~~V~Qdp~--LF-~gTIreNL~~~-------------a~~~~~i~~lp~Gldt-~vge~G~~LSGGQrQRla 1144 (1236)
..+|+.++|+||++. ++ ..|+++|+... ..+.+.+..+ |+++ ..+.....||||||||++
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~qrl~ 161 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQRVC 161 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHHHHH
Confidence 357889999999983 43 46999997421 1223333332 5653 566778899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 040099 1145 IARAIVKEPKILLLDEATSALDIESERVVQDALDQVMV--DRTTLVVAHRLSTIKN-AHLIAVVSQGMIVEKGSHESLIS 1221 (1236)
Q Consensus 1145 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--~~TvI~IaHRl~ti~~-aD~I~Vl~~G~Ive~Gt~~eLl~ 1221 (1236)
|||||+.+|+||||||||++||+++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 162 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 241 (268)
T PRK10419 162 LARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKLT 241 (268)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhccC
Confidence 99999999999999999999999999999999998753 7899999999999975 99999999999999999999986
Q ss_pred ccCcccHH
Q 040099 1222 TKNGIYTS 1229 (1236)
Q Consensus 1222 ~~~g~y~~ 1229 (1236)
. ++.|..
T Consensus 242 ~-~~~~~~ 248 (268)
T PRK10419 242 F-SSPAGR 248 (268)
T ss_pred C-CCHHHH
Confidence 4 555543
No 497
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-39 Score=337.09 Aligned_cols=171 Identities=51% Similarity=0.881 Sum_probs=160.6
Q ss_pred EEEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCCCHHHHhcceE
Q 040099 385 IELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEFQLKWIREKIG 464 (1236)
Q Consensus 385 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 464 (1236)
++++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++++
T Consensus 1 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (171)
T cd03228 1 IEFKNVSFSYPGR-PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIA 79 (171)
T ss_pred CEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEE
Confidence 4789999999742 236999999999999999999999999999999999999999999999999998887777888999
Q ss_pred EEccCCCCCchhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcCCCCE
Q 040099 465 LVSQEPVLLSSSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIKDPRI 544 (1236)
Q Consensus 465 ~v~Q~~~l~~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~~p~i 544 (1236)
|++|++.+|+.|++||+ ||||||||++||||++.+|++
T Consensus 80 ~~~~~~~~~~~t~~e~l------------------------------------------LS~G~~~rl~la~al~~~p~l 117 (171)
T cd03228 80 YVPQDPFLFSGTIRENI------------------------------------------LSGGQRQRIAIARALLRDPPI 117 (171)
T ss_pred EEcCCchhccchHHHHh------------------------------------------hCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHHccCceEEEEecCchhHhhcCeEEEEECCE
Q 040099 545 LLLDEATSALDSESGRMVQEALDRVMINRTTVIVSHRLSLIRNANIIAVIQQGK 598 (1236)
Q Consensus 545 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ad~i~vl~~G~ 598 (1236)
|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|+
T Consensus 118 lllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 118 LILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 999999999999999999999998877899999999999998899999999985
No 498
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=4.3e-39 Score=351.44 Aligned_cols=227 Identities=31% Similarity=0.488 Sum_probs=193.2
Q ss_pred CCcEEEEeEEEECCCCCC--------CccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCC
Q 040099 382 RGDIELKDVNFSYPARPD--------EQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKE 453 (1236)
Q Consensus 382 ~~~i~~~~v~f~y~~~~~--------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~ 453 (1236)
+.-++.+||...||-+++ ..+.++|||++++||+++|||+||||||||-..|+|+.+++ |+|.++|+++..
T Consensus 274 ~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~ 352 (534)
T COG4172 274 PVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDG 352 (534)
T ss_pred CceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccc
Confidence 345899999999974321 35899999999999999999999999999999999999877 999999999998
Q ss_pred CCHHH---HhcceEEEccCCC--CCc-hhHHHHHhcCC----CCCC----HHHHHHHHHHhccHHHHHhCCCCccccccC
Q 040099 454 FQLKW---IREKIGLVSQEPV--LLS-SSIRDNIAYGK----THAT----KEEIQAAAEAANASHFIKNLPQGLDTNVGE 519 (1236)
Q Consensus 454 ~~~~~---~r~~i~~v~Q~~~--l~~-~ti~~ni~~g~----~~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~ 519 (1236)
.+.+. +|+++-+|+|||+ |-+ .||.+-|.-|. |..+ ++++.+|++.++++.-. ...
T Consensus 353 ~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~----------r~R 422 (534)
T COG4172 353 LSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPAT----------RNR 422 (534)
T ss_pred cChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhH----------hhc
Confidence 87665 6789999999996 333 48888776652 3333 34566777777765432 334
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEEC
Q 040099 520 HGIQLSGGQKQRVAIARAMIKDPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQ 596 (1236)
Q Consensus 520 ~g~~LSgGqkqRiaiARal~~~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~ 596 (1236)
.+..+|||||||||||||++-+|++++||||||+||.....+|.+.|+++.+ +-+-++|||++..++. ||+|+||++
T Consensus 423 YPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~ 502 (534)
T COG4172 423 YPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRD 502 (534)
T ss_pred CCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeC
Confidence 4568999999999999999999999999999999999999999999998854 5699999999999987 999999999
Q ss_pred CEEEEEeCcccccccccchhhhh
Q 040099 597 GKIVEKGTHSELLENPYGAYNRL 619 (1236)
Q Consensus 597 G~i~~~g~~~~l~~~~~~~y~~~ 619 (1236)
|+|||+|+.++++++|...|.+-
T Consensus 503 GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 503 GKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred CEEeeeCCHHHHhcCCCcHHHHH
Confidence 99999999999999998888764
No 499
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=364.83 Aligned_cols=210 Identities=28% Similarity=0.490 Sum_probs=181.9
Q ss_pred cEEEeEEEEECCCCCCcccccceeEEecCCCEEEEEcCCCCChHHHHHHHhcccC-----CCCcEEEECCeeccc--CCh
Q 040099 1010 EVQFLRVSFKYPTRPHIEVFRDLCLTIPPGKTIALVGESGSGKSTVISLLQRFYD-----PSSGHITLDGVEIQK--LQV 1082 (1236)
Q Consensus 1010 ~I~f~~Vsf~Y~~~~~~~vL~~is~~I~~Ge~vaIVG~SGSGKSTL~~lL~r~~~-----~~~G~I~idG~di~~--i~~ 1082 (1236)
.|+++||+++|+++ ++|+++||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 45 ~l~i~nl~~~~~~~---~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~ 121 (305)
T PRK14264 45 KLSVEDLDVYYGDD---HALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNL 121 (305)
T ss_pred eEEEEEEEEEeCCe---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccH
Confidence 58999999999753 58999999999999999999999999999999999986 689999999999865 345
Q ss_pred HHHhcceEEEcCCCCCChhhHHHHHHHHhh-------------------------hchHHH--hhhhchhhhhcCCCCCC
Q 040099 1083 KWLRQQMGVVSQEPVLFSDTIRANIAEMAN-------------------------ANGFIS--GLQEGYDTLVGERGVQL 1135 (1236)
Q Consensus 1083 ~~lR~~i~~V~Qdp~LF~gTIreNL~~~a~-------------------------~~~~i~--~lp~Gldt~vge~G~~L 1135 (1236)
..+|++++||||++.+|++|++||+..... +.+.+. .+++++++.+...+.+|
T Consensus 122 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~L 201 (305)
T PRK14264 122 VELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNALGL 201 (305)
T ss_pred HHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCccccC
Confidence 678899999999999999999999962110 011111 12334456667888999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCchhhhh-cCEE-EEEeCCEEEEe
Q 040099 1136 SGGQKQRVAIARAIVKEPKILLLDEATSALDIESERVVQDALDQVMVDRTTLVVAHRLSTIKN-AHLI-AVVSQGMIVEK 1213 (1236)
Q Consensus 1136 SGGQrQRlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-aD~I-~Vl~~G~Ive~ 1213 (1236)
|||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+| ++|++|++++.
T Consensus 202 SgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~G~i~~~ 281 (305)
T PRK14264 202 SGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTGGELVEY 281 (305)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecCCEEEEe
Confidence 999999999999999999999999999999999999999999998777899999999999865 9997 57799999999
Q ss_pred cChhHHhhc
Q 040099 1214 GSHESLIST 1222 (1236)
Q Consensus 1214 Gt~~eLl~~ 1222 (1236)
|+++++.+.
T Consensus 282 g~~~~~~~~ 290 (305)
T PRK14264 282 DDTDKIFEN 290 (305)
T ss_pred CCHHHHHhC
Confidence 999999765
No 500
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-39 Score=350.73 Aligned_cols=204 Identities=32% Similarity=0.482 Sum_probs=169.8
Q ss_pred EEEeEEEECCCCCCCccccceeEEecCCcEEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCeecCCC----CHHHHhc
Q 040099 386 ELKDVNFSYPARPDEQILNGFCLLIPNGTIAALVGTSGSGKSTVISLIQRFYDPQAGEVLIDGVNLKEF----QLKWIRE 461 (1236)
Q Consensus 386 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r~ 461 (1236)
++ |++++|++ +.+ |+||+|++ |+++|+||||||||||+++|+|+++|++|+|.++|.++.+. +....++
T Consensus 3 ~~-~l~~~~~~---~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 3 CV-DIEKRLPD---FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred ee-eeeEecCC---eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 45 89999963 334 99999999 99999999999999999999999999999999999988643 2334678
Q ss_pred ceEEEccCCCCCc-hhHHHHHhcCCCCCCHHHHHHHHHHhccHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHhcC
Q 040099 462 KIGLVSQEPVLLS-SSIRDNIAYGKTHATKEEIQAAAEAANASHFIKNLPQGLDTNVGEHGIQLSGGQKQRVAIARAMIK 540 (1236)
Q Consensus 462 ~i~~v~Q~~~l~~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~g~~g~~LSgGqkqRiaiARal~~ 540 (1236)
+++|++|++.+|. .|++||+.++......++. ...+.++++.+ |++......+.+||||||||++||||++.
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNRED-----RISVDELLDLL--GLDHLLNRYPAQLSGGEKQRVALARALAA 148 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHHH-----HHHHHHHHHHc--CCHhHhhcCcccCCHHHHHHHHHHHHHhc
Confidence 8999999999986 5999999876432221111 11123444444 55555667778999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHHcc--CceEEEEecCchhHhh-cCeEEEEECCEEEEEe
Q 040099 541 DPRILLLDEATSALDSESGRMVQEALDRVMI--NRTTVIVSHRLSLIRN-ANIIAVIQQGKIVEKG 603 (1236)
Q Consensus 541 ~p~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~~~~~~~-ad~i~vl~~G~i~~~g 603 (1236)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|+++++|
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 149 QPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999998853 7899999999999864 9999999999998765
Done!