BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040100
MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIAVIAYQKRM
NRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAEFLESDIAA
PGFQEYEMSLRLMQMGAAVRNSSSYLRMKLNPDKMLPSNVLGAMSTGQLSNLMCAPD

High Scoring Gene Products

Symbol, full name Information P value
AT5G38200 protein from Arabidopsis thaliana 3.7e-39
AT1G66860 protein from Arabidopsis thaliana 4.0e-35
GAT1_2.1
AT1G15040
protein from Arabidopsis thaliana 1.3e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040100
        (177 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2176742 - symbol:AT5G38200 species:3702 "Arabi...   418  3.7e-39   1
TAIR|locus:2033324 - symbol:AT1G66860 species:3702 "Arabi...   380  4.0e-35   1
TAIR|locus:2196174 - symbol:GAT1_2.1 "AT1G15040" species:...   254  1.3e-21   1


>TAIR|locus:2176742 [details] [associations]
            symbol:AT5G38200 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006541 "glutamine
            metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR011697 Pfam:PF07722 EMBL:CP002688
            GO:GO:0016740 GO:GO:0016787 GO:GO:0006541 InterPro:IPR017926
            PROSITE:PS51273 IPI:IPI00527358 RefSeq:NP_568556.3 UniGene:At.26663
            ProteinModelPortal:F4KA45 EnsemblPlants:AT5G38200.1 GeneID:833802
            KEGG:ath:AT5G38200 OMA:GQICSEV Uniprot:F4KA45
        Length = 436

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 94/184 (51%), Positives = 124/184 (67%)

Query:     1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIA-------V 53
             MAFA DGL+EGFYDP+AYNP EGKF++GLQFH ERMR    +EFDYPGCP A       V
Sbjct:   228 MAFAADGLMEGFYDPDAYNPEEGKFIMGLQFHPERMRQHDLDEFDYPGCPAAYQEFAKAV 287

Query:    54 IAYQKRMNRASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINISGQTA-HPSEESELQAVA 111
             IAYQK++N +  VP  + L  ++  K K+LV+SFS AK + + G    +PS+ESEL+  A
Sbjct:   288 IAYQKKLNSSLSVPKTLKLDSEMENKRKMLVRSFSLAKYMYVRGAPGKNPSKESELEVGA 347

Query:   112 EFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYLR-MKLNPDKM-LPSNVLGAMSTGQL 169
             EFLES+ A    QE    +RL +MGA VRN  SY++ +K++ DK  +  N++  M+  QL
Sbjct:   348 EFLESNTALSAEQE----MRLKEMGATVRNGGSYMKKLKVDEDKQRMARNMMKKMNIEQL 403

Query:   170 SNLM 173
             S LM
Sbjct:   404 SELM 407


>TAIR|locus:2033324 [details] [associations]
            symbol:AT1G66860 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006541 "glutamine
            metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR011697 Pfam:PF07722 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0016740 GO:GO:0016787 GO:GO:0006541
            EMBL:AC013288 InterPro:IPR017926 PROSITE:PS51273 eggNOG:COG2071
            HOGENOM:HOG000030501 ProtClustDB:CLSN2689051 IPI:IPI00544352
            RefSeq:NP_564885.1 UniGene:At.18869 ProteinModelPortal:Q9C9N8
            SMR:Q9C9N8 STRING:Q9C9N8 MEROPS:C26.A06 PRIDE:Q9C9N8
            EnsemblPlants:AT1G66860.1 GeneID:843004 KEGG:ath:AT1G66860
            TAIR:At1g66860 InParanoid:Q9C9N8 OMA:IEFALAK PhylomeDB:Q9C9N8
            Genevestigator:Q9C9N8 Uniprot:Q9C9N8
        Length = 433

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 89/184 (48%), Positives = 120/184 (65%)

Query:     1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPIA-------V 53
             MAFAPDGLIEGFYDP+ YNP EGKFL+GLQFH ERMR + S+EFD+PGCP+A       V
Sbjct:   224 MAFAPDGLIEGFYDPDMYNPEEGKFLMGLQFHPERMRKNGSDEFDFPGCPVAYQEFAKAV 283

Query:    54 IAYQKRMNRASYVPNFIPLKQKI-GKSKVLVKSFSPAKDINI-SGQTAHPSEESELQAVA 111
             IA QK++N    VP  + L  ++  K K+LV+SFS A+ +   S    + S ESEL+  A
Sbjct:   284 IACQKKVNSFLSVPKKLELNPEMENKRKILVRSFSLARSMYTRSHSLKNQSTESELEVGA 343

Query:   112 EFLESDIAAPGFQEYEMSLRLMQMGAAVRNSSSYL-RMKLNPDKMLPS-NVLGAMSTGQL 169
             EFLES+ A    QE    +RL +MGA +RN  S+  +++L+  K   + N++  M+  +L
Sbjct:   344 EFLESNTALSVQQE----MRLKEMGATMRNGGSFTEKLRLDEKKQRKAMNIMKNMNIERL 399

Query:   170 SNLM 173
             S LM
Sbjct:   400 SELM 403


>TAIR|locus:2196174 [details] [associations]
            symbol:GAT1_2.1 "AT1G15040" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:2000032 "regulation of
            secondary shoot formation" evidence=IMP] InterPro:IPR011697
            Pfam:PF07722 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016740
            GO:GO:0016787 GO:GO:0006541 InterPro:IPR017926 PROSITE:PS51273
            GO:GO:2000032 eggNOG:COG2071 EMBL:BT001098 EMBL:AK175150
            EMBL:AK175288 EMBL:AK176685 IPI:IPI00524122 RefSeq:NP_850943.1
            UniGene:At.48191 UniGene:At.71037 ProteinModelPortal:Q8H0Z4
            MEROPS:C26.A08 PRIDE:Q8H0Z4 DNASU:838069 EnsemblPlants:AT1G15040.1
            GeneID:838069 KEGG:ath:AT1G15040 TAIR:At1g15040
            HOGENOM:HOG000030501 InParanoid:Q8H0Z4 OMA:QQYAPAH PhylomeDB:Q8H0Z4
            ProtClustDB:CLSN2689051 Genevestigator:Q8H0Z4 Uniprot:Q8H0Z4
        Length = 395

 Score = 254 (94.5 bits), Expect = 1.3e-21, P = 1.3e-21
 Identities = 65/149 (43%), Positives = 85/149 (57%)

Query:     1 MAFAPDGLIEGFYDPEAYNPREGKFLVGLQFHSERMRLSSSEEFDYPGCPI-------AV 53
             MA+APDGLIEGFYDP  Y+P+EG+FL+GLQFH ERMRL  S+EFDYPGC +       AV
Sbjct:   215 MAYAPDGLIEGFYDPNRYDPKEGQFLMGLQFHPERMRLPGSDEFDYPGCALVYQEFVKAV 274

Query:    54 IAYQKRMNRASYVPNFIPLKQKIGKSKVLVKSFSPAKDINISGQTAHPSEESELQAVAEF 113
             IA+QK+   A+ V     +K+K   +  LVKSFS A+ +  +   +   E    Q  A  
Sbjct:   275 IAFQKKQVNATQVE----MKRK---TTTLVKSFSQAEFLEANTVLSKQQENRLKQMGATV 327

Query:   114 LESDIAAPGFQEYEMSLRLMQMGAAVRNS 142
               S +     +  E   R M   +A R S
Sbjct:   328 RNSCVYMKRMKMKEEQERAMDKLSAERLS 356


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      177       177   0.00084  109 3  11 22  0.43    32
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  133 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.72u 0.18s 17.90t   Elapsed:  00:00:01
  Total cpu time:  17.72u 0.18s 17.90t   Elapsed:  00:00:01
  Start:  Mon May 20 18:18:41 2013   End:  Mon May 20 18:18:42 2013

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