BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040104
(105 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%)
Query: 6 VEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREV 65
+E+I A+G +V+ DC+G K ++ ++ TR GG + LVGMG +TVPL A ARE+
Sbjct: 230 IERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREI 289
Query: 66 DVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
D+ VFRY N +P+ LE + SG+ ++K LVTH F Q
Sbjct: 290 DIKSVFRYCNDYPIALEMVASGRCNVKQLVTHSFKLEQ 327
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 96.7 bits (239), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 62/96 (64%)
Query: 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAR 63
E K++ +G +V+ +C G ++ + ATR+GG + LVG+G TVPL AA R
Sbjct: 230 EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIR 289
Query: 64 EVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRF 99
EVD+ GVFRY NTWP+ + L S +++KPLVTHRF
Sbjct: 290 EVDIKGVFRYCNTWPVAISXLASKSVNVKPLVTHRF 325
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%)
Query: 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAR 63
E K++ +G +V+ +C G ++ + ATR+GG + LVG+G TVPL AA R
Sbjct: 230 EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIR 289
Query: 64 EVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
EVD+ GVFRY NTWP+ + L S +++KPLVTHRF +
Sbjct: 290 EVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEK 329
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 64/100 (64%)
Query: 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAR 63
E +K++ +G+ +V+ +C G ++ + AT +GG + LVG+G +VPL AA R
Sbjct: 229 EIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATR 288
Query: 64 EVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
EVD+ GVFRY NTWP+ + L S +++KPLVTHRF +
Sbjct: 289 EVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPLEK 328
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 4 EEVEKIDKAMGTGID--VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA 61
E +KI ++ G GI+ V+ +C G +++ A+ A + GGKV ++G+G +E+ +P A+
Sbjct: 239 ESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRAS 297
Query: 62 AREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRF 99
REVD+ +RY NTWP + + +G +D+ LVTHRF
Sbjct: 298 VREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRF 335
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 9 IDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP---LTPAAAREV 65
+D G G++V + +G K + L A GG+V L+G+ E+T+ L A EV
Sbjct: 229 MDITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEV 288
Query: 66 DVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRF-GFSQKE 105
+ TW ++SGK+++ P++TH++ GF + E
Sbjct: 289 HGITGRHLWETWYTVSSLIQSGKLNLDPIITHKYKGFDKFE 329
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 1 DIAEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPA 60
D+ +EV I G G+DV + +G K + L A G+V L+G+ ++T+
Sbjct: 222 DVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNL 279
Query: 61 AA-REVDVVGVF--RYKNTWPLCLEFLRSGKIDIKPLVTHRF-GFSQKE 105
+ + + G+ TW L+SGK+++ P++TH++ GF + E
Sbjct: 280 IIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYE 328
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 1 DIAEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPA 60
D+ +EV I G G+DV + +G K + L A G+V L+G+ ++T+
Sbjct: 223 DVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNL 280
Query: 61 AA-REVDVVGVF--RYKNTWPLCLEFLRSGKIDIKPLVTHRF-GFSQKE 105
+ + + G+ TW L+SGK+++ P++TH++ GF + E
Sbjct: 281 IIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYE 329
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAA-AREVD--VVGVF 71
G+D S DCAG +T+ A+ T G G +VG EMT+P R ++ G +
Sbjct: 265 GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGW 324
Query: 72 RYKNTWPLCLEFLRSGKIDIKPLVTHRFGF 101
+ ++ P + ++ K D+ LVTH F
Sbjct: 325 KSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAA-AREVD--VVGVF 71
G+D S DCAG +T+ A+ T G G +VG EMT+P R ++ G +
Sbjct: 265 GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGW 324
Query: 72 RYKNTWPLCLEFLRSGKIDIKPLVTHRFGF 101
+ ++ P + ++ K D+ LVTH F
Sbjct: 325 KSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 39.3 bits (90), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 6 VEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAARE 64
+E + + G+G++V + +G + L A GG+ ++G+ + L R
Sbjct: 221 LEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRG 280
Query: 65 VDVVGVF--RYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
+ G+ R TW + SG++D+ PL+THR S+
Sbjct: 281 ITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSR 321
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCL---VGMGHHEMTV-PLTPAAAREVD--VVG 69
G+D + DCAG ++TM AL T AG C V G +TV P R ++ G
Sbjct: 268 GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEELIIGRTINGTFFG 327
Query: 70 VFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
++ ++ P + ++ K ++ LVTH F +
Sbjct: 328 GWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK 361
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 1 DIAEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP- 59
D+ E + + G+DV +CAG +T+ + +AGG V ++G+ V + P
Sbjct: 238 DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPF 297
Query: 60 -AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
RE+ V+G F + + +G I+I ++ R +
Sbjct: 298 DILFRELRVLGSFINPFVHRRAADLVATGAIEIDRXISRRISLDE 342
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +VG+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +VG+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +VG+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +VG+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +VG+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +VG+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +VG+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN 304
Query: 59 PA---AAREVD--VVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + R + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G + G+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM ALS + A G +VG+ + +
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 353
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM ALS + A G +VG+ + +
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 353
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G +V + + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1 DIAEEVEKIDKAMGTG-IDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLT 58
D + ++++ M G +D SF+ G TM TALS + A G + G+ + +
Sbjct: 245 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMN 304
Query: 59 P-----AAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
P + + G F+ K++ P + + K + PL+TH F +
Sbjct: 305 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK 354
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 21 FDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA-----AREVDVVGVF-RYK 74
+ AG +T+ A+ ++ LVG H ++ LT A +E+ V+G + Y
Sbjct: 234 LETAGVPQTVELAVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTVIGSWMNYS 291
Query: 75 NTWP-----LCLEFLRSGKIDIKPLVTHRFGF 101
+ WP L K+ ++PL+ HR F
Sbjct: 292 SPWPGQEWETASRLLTERKLSLEPLIAHRGSF 323
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 1 DIAEEVEKI-DKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMG--HHEMTVP 56
D +E + ++ K G+D S +C G M AL + G G LVG H T P
Sbjct: 246 DHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRP 305
Query: 57 LTPAAAR--EVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRF 99
+ A R + + G F+ K+ P ++ K+ + +THR
Sbjct: 306 IQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM 350
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 33/83 (39%)
Query: 21 FDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLC 80
D A + A++ ++ L+G V +E+ + N +P+
Sbjct: 253 IDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVV 312
Query: 81 LEFLRSGKIDIKPLVTHRFGFSQ 103
+++L G I + L+TH F F
Sbjct: 313 IDWLSKGLIKPEKLITHTFDFQH 335
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 2 IAEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA 61
+ E+ K K G+ + A +A ++ R GG LVG+ EM +P+
Sbjct: 216 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTV 275
Query: 62 AREVDVVG-VFRYKNTWPLCLEFLRSGK----IDIKPL 94
+ ++G + + L+F GK I+++PL
Sbjct: 276 LNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPL 313
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 2 IAEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA 61
+ E+ K K G+ + A +A ++ R GG LVG+ EM +P+
Sbjct: 216 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTV 275
Query: 62 AREVDVVG-VFRYKNTWPLCLEFLRSGK----IDIKPL 94
+ ++G + + L+F GK I+++PL
Sbjct: 276 LNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPL 313
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGM---GHHEMTVPLTPAAAR--EVDVVG 69
G+D SF+C G M AL G G +VG+ G T P R + G
Sbjct: 263 GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG 322
Query: 70 VFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
F+ + P +E + +I + +TH +
Sbjct: 323 GFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGE 356
>pdb|2QNY|A Chain A, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And Ss-(2-Hydroxyethyl) O-Decyl
Ester Carbono(Dithioperoxoic) Acid
pdb|2QNY|B Chain B, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And Ss-(2-Hydroxyethyl) O-Decyl
Ester Carbono(Dithioperoxoic) Acid
pdb|2QO0|A Chain A, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And 11-(Decyldithiocarbonyloxy)-
Undecanoic Acid
pdb|2QO0|B Chain B, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And 11-(Decyldithiocarbonyloxy)-
Undecanoic Acid
Length = 335
Score = 28.9 bits (63), Expect = 0.83, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 54
G D+S CAGF + A R GG ++ +G +++
Sbjct: 115 GFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLS 153
>pdb|1HZP|A Chain A, Crystal Structure Of The Myobacterium Tuberculosis
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii
pdb|1HZP|B Chain B, Crystal Structure Of The Myobacterium Tuberculosis
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii
pdb|2QX1|A Chain A, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase
Iii (Fabh) And Decyl-Coa Disulfide
pdb|2QX1|B Chain B, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase
Iii (Fabh) And Decyl-Coa Disulfide
pdb|2QNX|A Chain A, Crystal Structure Of The Complex Between The Mycobacterium
Beta- Ketoacyl-acyl Carrier Protein Synthase Iii (fabh)
And 11- [(decyloxycarbonyl)dithio]-undecanoic Acid
pdb|2QNX|B Chain B, Crystal Structure Of The Complex Between The Mycobacterium
Beta- Ketoacyl-acyl Carrier Protein Synthase Iii (fabh)
And 11- [(decyloxycarbonyl)dithio]-undecanoic Acid
pdb|2QNZ|A Chain A, Crystal Structure Of The Complex Between The Mycobacterium
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii (Fabh)
And Ss-(2-Hydroxyethyl)-O-Decyl Ester
Carbono(Dithioperoxoic) Acid
pdb|2QNZ|B Chain B, Crystal Structure Of The Complex Between The Mycobacterium
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii (Fabh)
And Ss-(2-Hydroxyethyl)-O-Decyl Ester
Carbono(Dithioperoxoic) Acid
pdb|2QO1|A Chain A, 2.6 Angstrom Crystal Structure Of The Complex Between 11-
(Decyldithiocarbonyloxy)-Undecanoic Acid And
Mycobacterium Tuberculosis Fabh.
pdb|2QO1|B Chain B, 2.6 Angstrom Crystal Structure Of The Complex Between 11-
(Decyldithiocarbonyloxy)-Undecanoic Acid And
Mycobacterium Tuberculosis Fabh
Length = 335
Score = 28.9 bits (63), Expect = 0.84, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 54
G D+S CAGF + A R GG ++ +G +++
Sbjct: 115 GFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLS 153
>pdb|1M1M|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
pdb|1M1M|B Chain B, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
Length = 355
Score = 28.9 bits (63), Expect = 0.84, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 54
G D+S CAGF + A R GG ++ +G +++
Sbjct: 135 GFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLS 173
>pdb|2AHB|A Chain A, X-Ray Crystal Structure Of R46a,R161a Mutant Of
Mycobacterium Tuberculosis Fabh
pdb|2AHB|B Chain B, X-Ray Crystal Structure Of R46a,R161a Mutant Of
Mycobacterium Tuberculosis Fabh
Length = 356
Score = 28.9 bits (63), Expect = 0.86, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 54
G D+S CAGF + A R GG ++ +G +++
Sbjct: 136 GFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLS 174
>pdb|2AJ9|A Chain A, X-Ray Crystal Structure Of W42a,R161a Double Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acp Synthase
Iii
pdb|2AJ9|B Chain B, X-Ray Crystal Structure Of W42a,R161a Double Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acp Synthase
Iii
Length = 356
Score = 28.5 bits (62), Expect = 0.90, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 54
G D+S CAGF + A R GG ++ +G +++
Sbjct: 136 GFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLS 174
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 31/113 (27%)
Query: 6 VEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV------------------ 46
VE+I KA G G+D G T + A+ + G + V
Sbjct: 224 VEQILKATDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGV 283
Query: 47 GMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRF 99
GMGH + LTP G R + L + +GK+D L+THRF
Sbjct: 284 GMGHKHIHGGLTPG--------GRVRMEKLASL----ISTGKLDTSKLITHRF 324
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 12/54 (22%)
Query: 46 VGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRF 99
VGMGH + LTP G R + L + +GK+D L+THRF
Sbjct: 283 VGMGHKHIHGGLTPG--------GRVRMEKLASL----ISTGKLDTSKLITHRF 324
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGM---GHHEMTVPLTPAAAR--EVDVVG 69
G+D SF+C G M +AL G G +VG+ G T P R + G
Sbjct: 281 GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG 340
Query: 70 VFRYKNTWPLCLEFLRSGKIDIKPLVTHRF 99
F+ ++ P ++ +I + +TH
Sbjct: 341 GFKSRSQVPSLVDKYLKKEIKVDEYITHNM 370
>pdb|2VJY|A Chain A, Pyruvate Decarboxylase From Kluyveromyces Lactis In
Complex With The Substrate Analogue Methyl
Acetylphosphonate
pdb|2VJY|B Chain B, Pyruvate Decarboxylase From Kluyveromyces Lactis In
Complex With The Substrate Analogue Methyl
Acetylphosphonate
pdb|2VJY|C Chain C, Pyruvate Decarboxylase From Kluyveromyces Lactis In
Complex With The Substrate Analogue Methyl
Acetylphosphonate
pdb|2VJY|D Chain D, Pyruvate Decarboxylase From Kluyveromyces Lactis In
Complex With The Substrate Analogue Methyl
Acetylphosphonate
pdb|2VK4|A Chain A, Crystal Structure Of Pyruvate Decarboxylase From
Kluyveromyces Lactis
pdb|2VK4|B Chain B, Crystal Structure Of Pyruvate Decarboxylase From
Kluyveromyces Lactis
pdb|2VK4|C Chain C, Crystal Structure Of Pyruvate Decarboxylase From
Kluyveromyces Lactis
pdb|2VK4|D Chain D, Crystal Structure Of Pyruvate Decarboxylase From
Kluyveromyces Lactis
Length = 563
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 24/62 (38%)
Query: 42 KVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGF 101
KV G+ + VP P V + + W EFLR G + I T FG
Sbjct: 336 KVADAAKGYKPVPVPSEPEHNEAVADSTPLKQEWVWTQVGEFLREGDVVITETGTSAFGI 395
Query: 102 SQ 103
+Q
Sbjct: 396 NQ 397
>pdb|1MZJ|A Chain A, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
pdb|1MZJ|B Chain B, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
Length = 339
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 54
G D+S CAGF +S A A +GG ++ + MT
Sbjct: 114 GFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT 152
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 7 EKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46
E I + G+D + +CAG +TM AL +T G V +V
Sbjct: 252 EVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVV 291
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG----GKVCLVGMGHHEMTVPLTPAAAR--EVDVVG 69
G+D SF+C G K M AL A G V + G T P R + G
Sbjct: 260 GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG 319
Query: 70 VFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
++ + P + S KI + VTH F +
Sbjct: 320 GWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDE 353
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG----GKVCLVGMGHHEMTVPLTPAAAR--EVDVVG 69
G+D SF+C G K M AL A G V + G T P R + G
Sbjct: 261 GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG 320
Query: 70 VFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
++ + P + S KI + VTH F +
Sbjct: 321 GWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDE 354
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG----GKVCLVGMGHHEMTVPLTPAAAR--EVDVVG 69
G+D SF+C G K M AL A G V + G T P R + G
Sbjct: 261 GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG 320
Query: 70 VFRYKNTWPLCLEFLRSGKIDIKPLVTHRFGFSQ 103
++ + P + S KI + VTH F +
Sbjct: 321 GWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDE 354
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 16 GIDVSFDCAGFNKTMSTALSATRAG 40
G+D SF+C G K M AL A G
Sbjct: 260 GVDYSFECIGNVKVMRAALEACHKG 284
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 1 DIAEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPA 60
D+A + + D + D + G + +ST L +GG G+ PL A
Sbjct: 137 DVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSA 196
Query: 61 AAREVDVVGVFRY---KNTWPLCLEFLR 85
E+D + V Y +N W L + LR
Sbjct: 197 VISELDAIQVNYYLDEENCWALNVNELR 224
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAR 63
+E++KI G G+ + CA A+++ + GK+ V + + EMT+ +
Sbjct: 222 DEIKKITG--GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFD 279
Query: 64 EVDVVG-VFRYKNTWPLCLEFLRSGKIDIKPLVTHR 98
V+V G + + +F GK +KP+V R
Sbjct: 280 GVEVAGSLVGTRLDLAEAFQFGAEGK--VKPIVATR 313
>pdb|1P31|A Chain A, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) From Haemophilus Influenzae
pdb|1P31|B Chain B, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) From Haemophilus Influenzae
pdb|1P3D|A Chain A, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) In Complex With Uma And Anp.
pdb|1P3D|B Chain B, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) In Complex With Uma And Anp
Length = 475
Score = 25.8 bits (55), Expect = 6.5, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 38 RAGGKVCLVG-MGHHEMTVPLTPAAARE----VDVVGVF---RYKNTWPLCLEFLR 85
R GKV LV GHH V +T AARE +V +F RY T L +F++
Sbjct: 335 RPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVXIFQPHRYSRTRDLFDDFVQ 390
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAR 63
+E++KI G G+ + CA A+++ + GK+ V + + EMT+ +
Sbjct: 222 DEIKKITG--GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFD 279
Query: 64 EVDVVG-VFRYKNTWPLCLEFLRSGKIDIKPLVTHR 98
V+V G + + +F GK +KP+V R
Sbjct: 280 GVEVAGSLVGTRLDLAEAFQFGAEGK--VKPIVATR 313
>pdb|1PS9|A Chain A, The Crystal Structure And Reaction Mechanism Of E. Coli
2,4- Dienoyl Coa Reductase
Length = 671
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 17 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP 56
+D+ D F +T+ A + AG + G+G HE +P
Sbjct: 218 LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIP 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,251,892
Number of Sequences: 62578
Number of extensions: 119978
Number of successful extensions: 397
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 360
Number of HSP's gapped (non-prelim): 54
length of query: 105
length of database: 14,973,337
effective HSP length: 70
effective length of query: 35
effective length of database: 10,592,877
effective search space: 370750695
effective search space used: 370750695
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)