Query 040104
Match_columns 105
No_of_seqs 122 out of 1553
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 07:48:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040104.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040104hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m6i_A L-arabinitol 4-dehydrog 99.8 1.1E-18 3.7E-23 115.1 10.7 103 2-104 237-340 (363)
2 1pl8_A Human sorbitol dehydrog 99.8 6.6E-18 2.2E-22 111.2 10.9 102 3-104 229-330 (356)
3 4ej6_A Putative zinc-binding d 99.7 3E-18 1E-22 113.4 7.7 102 3-104 237-343 (370)
4 2dq4_A L-threonine 3-dehydroge 99.7 1.6E-17 5.4E-22 108.9 6.6 102 3-104 218-322 (343)
5 1e3j_A NADP(H)-dependent ketos 99.7 4.4E-17 1.5E-21 107.1 8.7 101 4-104 224-328 (352)
6 3ip1_A Alcohol dehydrogenase, 99.7 6.3E-17 2.2E-21 108.1 8.8 101 3-104 268-376 (404)
7 4a2c_A Galactitol-1-phosphate 99.7 2.4E-17 8.3E-22 107.9 6.2 101 4-104 216-326 (346)
8 2d8a_A PH0655, probable L-thre 99.7 5.9E-17 2E-21 106.4 7.4 102 3-104 222-328 (348)
9 3fpc_A NADP-dependent alcohol 99.7 3.7E-17 1.3E-21 107.4 5.6 102 3-104 221-330 (352)
10 1e3i_A Alcohol dehydrogenase, 99.7 8.7E-17 3E-21 106.5 6.6 100 4-104 253-357 (376)
11 3uko_A Alcohol dehydrogenase c 99.7 1.7E-16 5.8E-21 105.2 7.8 101 3-104 250-357 (378)
12 1p0f_A NADP-dependent alcohol 99.7 3E-16 1E-20 103.8 8.6 100 4-104 249-354 (373)
13 4eez_A Alcohol dehydrogenase 1 99.7 9.6E-17 3.3E-21 105.1 5.6 99 3-104 218-318 (348)
14 1vj0_A Alcohol dehydrogenase, 99.7 6E-17 2.1E-21 107.5 4.3 101 2-104 252-359 (380)
15 1f8f_A Benzyl alcohol dehydrog 99.7 1.7E-16 5.7E-21 105.0 6.3 101 3-104 245-351 (371)
16 3uog_A Alcohol dehydrogenase; 99.6 1.4E-16 4.9E-21 105.1 5.6 99 3-104 243-344 (363)
17 2jhf_A Alcohol dehydrogenase E 99.6 5.2E-16 1.8E-20 102.7 8.0 100 4-104 249-355 (374)
18 1cdo_A Alcohol dehydrogenase; 99.6 4.3E-16 1.5E-20 103.1 7.5 100 4-104 250-355 (374)
19 2fzw_A Alcohol dehydrogenase c 99.6 4.9E-16 1.7E-20 102.7 7.8 100 4-104 248-354 (373)
20 3jv7_A ADH-A; dehydrogenase, n 99.6 3.3E-16 1.1E-20 102.7 5.6 97 4-104 226-325 (345)
21 2h6e_A ADH-4, D-arabinose 1-de 99.6 1.8E-15 6.2E-20 99.1 8.0 94 9-105 230-325 (344)
22 2b5w_A Glucose dehydrogenase; 99.6 1.6E-16 5.5E-21 104.6 2.6 95 9-105 236-338 (357)
23 2dph_A Formaldehyde dismutase; 99.6 3.8E-16 1.3E-20 104.2 3.6 99 6-104 243-372 (398)
24 4a0s_A Octenoyl-COA reductase/ 99.6 2.2E-15 7.4E-20 101.8 7.2 97 5-104 295-393 (447)
25 3krt_A Crotonyl COA reductase; 99.6 1.1E-15 3.8E-20 103.5 5.8 98 4-104 301-401 (456)
26 1jvb_A NAD(H)-dependent alcoho 99.6 6.1E-16 2.1E-20 101.5 4.3 98 4-104 227-327 (347)
27 4dup_A Quinone oxidoreductase; 99.6 2.8E-15 9.7E-20 98.6 6.6 99 3-104 222-333 (353)
28 2eih_A Alcohol dehydrogenase; 99.6 4.5E-15 1.6E-19 97.2 7.1 98 4-104 222-322 (343)
29 3gaz_A Alcohol dehydrogenase s 99.6 6.4E-15 2.2E-19 96.6 6.7 96 3-104 202-311 (343)
30 1rjw_A ADH-HT, alcohol dehydro 99.6 5E-15 1.7E-19 96.9 5.8 97 4-104 219-316 (339)
31 3pi7_A NADH oxidoreductase; gr 99.5 1E-15 3.6E-20 100.5 1.9 99 3-104 219-330 (349)
32 3qwb_A Probable quinone oxidor 99.5 9.7E-15 3.3E-19 95.3 6.4 99 3-104 203-312 (334)
33 4a27_A Synaptic vesicle membra 99.5 2.2E-15 7.4E-20 99.0 3.3 99 3-104 195-322 (349)
34 2cdc_A Glucose dehydrogenase g 99.5 4.6E-16 1.6E-20 102.7 0.0 97 7-104 238-344 (366)
35 3s2e_A Zinc-containing alcohol 99.5 4.9E-15 1.7E-19 96.9 4.9 98 3-104 220-318 (340)
36 1kol_A Formaldehyde dehydrogen 99.5 6.6E-15 2.2E-19 98.1 4.4 100 5-104 242-372 (398)
37 1h2b_A Alcohol dehydrogenase; 99.5 8.9E-15 3E-19 96.4 4.5 94 5-104 242-339 (359)
38 4eye_A Probable oxidoreductase 99.5 1.5E-14 5.2E-19 94.8 4.7 98 3-104 213-322 (342)
39 2hcy_A Alcohol dehydrogenase 1 99.5 1.5E-14 5.3E-19 94.8 4.6 99 3-104 225-325 (347)
40 4b7c_A Probable oxidoreductase 99.5 3.2E-14 1.1E-18 92.9 5.4 99 3-104 205-316 (336)
41 1gu7_A Enoyl-[acyl-carrier-pro 99.5 9.3E-14 3.2E-18 91.5 7.2 97 3-102 229-339 (364)
42 3jyn_A Quinone oxidoreductase; 99.5 7.7E-14 2.6E-18 90.8 6.5 99 3-104 195-305 (325)
43 2j3h_A NADP-dependent oxidored 99.5 6.3E-14 2.2E-18 91.7 5.6 98 4-104 213-322 (345)
44 2j8z_A Quinone oxidoreductase; 99.5 6.8E-14 2.3E-18 92.1 5.6 100 4-104 218-332 (354)
45 3gqv_A Enoyl reductase; medium 99.5 9.5E-14 3.2E-18 91.9 6.0 102 3-104 218-339 (371)
46 1wly_A CAAR, 2-haloacrylate re 99.5 7.1E-14 2.4E-18 91.2 5.3 98 4-104 201-311 (333)
47 1yqd_A Sinapyl alcohol dehydro 99.5 3.9E-14 1.3E-18 93.6 4.0 93 8-104 244-337 (366)
48 2cf5_A Atccad5, CAD, cinnamyl 99.5 2.3E-14 7.9E-19 94.4 2.8 92 8-104 237-330 (357)
49 3two_A Mannitol dehydrogenase; 99.4 3.5E-14 1.2E-18 93.2 3.1 86 16-104 234-323 (348)
50 1yb5_A Quinone oxidoreductase; 99.4 1.3E-13 4.6E-18 90.6 5.5 98 3-104 225-330 (351)
51 3fbg_A Putative arginate lyase 99.4 1.6E-13 5.6E-18 90.0 5.3 97 4-104 205-317 (346)
52 1qor_A Quinone oxidoreductase; 99.4 3E-13 1E-17 88.0 5.7 99 3-104 195-307 (327)
53 4dvj_A Putative zinc-dependent 99.4 2.4E-13 8.1E-18 89.8 5.2 96 4-104 227-338 (363)
54 3gms_A Putative NADPH:quinone 99.4 2.4E-14 8.3E-19 93.7 -0.0 99 3-104 199-310 (340)
55 1uuf_A YAHK, zinc-type alcohol 99.4 1.2E-13 4.1E-18 91.4 2.5 87 15-104 256-344 (369)
56 1piw_A Hypothetical zinc-type 99.4 9.9E-14 3.4E-18 91.4 1.6 85 15-103 242-330 (360)
57 1zsy_A Mitochondrial 2-enoyl t 99.4 4.9E-13 1.7E-17 88.0 4.5 93 9-104 231-337 (357)
58 2c0c_A Zinc binding alcohol de 99.4 4.9E-13 1.7E-17 88.2 4.5 100 4-104 219-340 (362)
59 2zb4_A Prostaglandin reductase 99.3 1.2E-12 4.2E-17 86.1 5.4 98 4-104 218-331 (357)
60 1tt7_A YHFP; alcohol dehydroge 99.3 1.2E-13 4.2E-18 89.9 0.5 89 13-104 214-310 (330)
61 3slk_A Polyketide synthase ext 99.3 1.7E-12 5.9E-17 93.0 5.8 98 3-104 398-503 (795)
62 1v3u_A Leukotriene B4 12- hydr 99.3 2.4E-12 8.2E-17 83.9 5.3 99 3-104 201-313 (333)
63 3nx4_A Putative oxidoreductase 99.3 8.7E-14 3E-18 90.4 -1.9 89 12-104 207-303 (324)
64 3tqh_A Quinone oxidoreductase; 99.3 5.3E-13 1.8E-17 86.7 1.6 85 15-104 214-300 (321)
65 1iz0_A Quinone oxidoreductase; 99.3 1.7E-12 5.9E-17 83.6 3.0 86 15-104 188-282 (302)
66 3goh_A Alcohol dehydrogenase, 99.2 3.7E-13 1.3E-17 87.2 -2.6 88 14-104 197-295 (315)
67 1xa0_A Putative NADPH dependen 99.2 2.5E-12 8.5E-17 83.7 0.8 91 9-104 209-307 (328)
68 3iup_A Putative NADPH:quinone 99.1 9.1E-12 3.1E-16 82.6 -0.1 98 3-104 226-351 (379)
69 1pqw_A Polyketide synthase; ro 99.1 1.8E-10 6.3E-15 69.9 5.2 87 4-92 94-193 (198)
70 2vn8_A Reticulon-4-interacting 99.0 5.8E-11 2E-15 78.6 1.7 96 5-104 239-354 (375)
71 2vz8_A Fatty acid synthase; tr 98.9 2.1E-09 7E-14 84.4 5.1 99 3-104 1726-1836(2512)
72 1pjc_A Protein (L-alanine dehy 97.3 0.00016 5.5E-09 47.8 3.0 72 16-87 230-327 (361)
73 2eez_A Alanine dehydrogenase; 96.6 0.00087 3E-08 44.3 2.3 72 16-87 229-326 (369)
74 2vhw_A Alanine dehydrogenase; 96.5 0.00041 1.4E-08 46.1 -0.1 72 16-87 231-328 (377)
75 1l7d_A Nicotinamide nucleotide 96.2 0.003 1E-07 42.1 2.7 81 9-90 251-341 (384)
76 1x13_A NAD(P) transhydrogenase 96.1 0.0045 1.6E-07 41.5 3.2 72 16-87 255-337 (401)
77 3ce6_A Adenosylhomocysteinase; 94.5 0.019 6.6E-07 39.6 2.3 45 16-62 329-374 (494)
78 2yvl_A TRMI protein, hypotheti 93.9 0.11 3.9E-06 31.7 4.7 34 15-48 157-191 (248)
79 2nyu_A Putative ribosomal RNA 92.8 0.15 5.1E-06 30.0 3.8 41 8-48 88-146 (196)
80 3cea_A MYO-inositol 2-dehydrog 92.1 0.79 2.7E-05 29.6 6.9 71 15-89 70-150 (346)
81 3fpf_A Mtnas, putative unchara 90.6 0.39 1.3E-05 31.1 4.2 34 15-48 187-223 (298)
82 3pym_A GAPDH 3, glyceraldehyde 88.8 0.69 2.4E-05 30.4 4.4 37 15-51 88-124 (332)
83 3v1y_O PP38, glyceraldehyde-3- 88.5 0.6 2.1E-05 30.7 3.9 36 16-51 93-128 (337)
84 3hm2_A Precorrin-6Y C5,15-meth 88.4 0.86 3E-05 26.1 4.3 34 15-48 93-128 (178)
85 1ej0_A FTSJ; methyltransferase 88.1 1 3.5E-05 25.4 4.5 35 14-48 86-137 (180)
86 1p91_A Ribosomal RNA large sub 87.7 0.25 8.7E-06 30.6 1.8 33 15-48 147-179 (269)
87 3njr_A Precorrin-6Y methylase; 86.9 1.4 4.9E-05 26.3 4.8 34 16-49 122-156 (204)
88 3e05_A Precorrin-6Y C5,15-meth 86.8 1.1 3.9E-05 26.4 4.3 34 15-48 107-143 (204)
89 3rc1_A Sugar 3-ketoreductase; 86.8 2.6 8.7E-05 27.5 6.2 71 15-89 88-167 (350)
90 3h9e_O Glyceraldehyde-3-phosph 86.6 1.1 3.8E-05 29.6 4.3 36 16-51 94-129 (346)
91 1rm4_O Glyceraldehyde 3-phosph 86.4 0.72 2.5E-05 30.3 3.4 35 16-50 91-125 (337)
92 3gvp_A Adenosylhomocysteinase 86.1 0.5 1.7E-05 32.2 2.6 36 16-51 275-311 (435)
93 2x5j_O E4PDH, D-erythrose-4-ph 85.8 0.88 3E-05 29.9 3.6 35 16-50 92-126 (339)
94 4hkt_A Inositol 2-dehydrogenas 85.5 2 6.9E-05 27.6 5.2 71 15-89 62-141 (331)
95 3tfw_A Putative O-methyltransf 85.4 0.87 3E-05 28.1 3.3 34 15-48 135-171 (248)
96 1i9g_A Hypothetical protein RV 85.0 0.82 2.8E-05 28.4 3.1 34 15-48 170-204 (280)
97 2pwy_A TRNA (adenine-N(1)-)-me 84.9 0.8 2.7E-05 28.0 3.0 34 15-48 165-199 (258)
98 3lvf_P GAPDH 1, glyceraldehyde 84.8 1 3.6E-05 29.6 3.6 36 15-50 90-125 (338)
99 3e18_A Oxidoreductase; dehydro 84.8 2 7E-05 28.0 5.0 72 14-89 63-143 (359)
100 2pbf_A Protein-L-isoaspartate 84.7 0.35 1.2E-05 29.2 1.3 33 15-47 161-193 (227)
101 3duw_A OMT, O-methyltransferas 84.6 2.7 9.3E-05 25.1 5.3 34 15-48 132-168 (223)
102 1u8f_O GAPDH, glyceraldehyde-3 84.6 0.74 2.5E-05 30.1 2.8 36 15-50 90-125 (335)
103 2glx_A 1,5-anhydro-D-fructose 84.6 5.6 0.00019 25.4 7.0 71 15-89 61-140 (332)
104 3db2_A Putative NADPH-dependen 84.4 2.1 7.1E-05 27.8 4.9 72 14-89 64-144 (354)
105 3e9m_A Oxidoreductase, GFO/IDH 84.2 2.1 7.3E-05 27.5 4.9 72 15-90 66-146 (330)
106 2yxe_A Protein-L-isoaspartate 84.1 0.36 1.2E-05 28.8 1.1 33 15-47 145-177 (215)
107 3i23_A Oxidoreductase, GFO/IDH 84.0 6.6 0.00023 25.4 7.4 71 15-89 64-143 (349)
108 3kux_A Putative oxidoreductase 83.7 6.3 0.00022 25.5 7.0 71 15-89 66-145 (352)
109 1gad_O D-glyceraldehyde-3-phos 83.6 0.93 3.2E-05 29.7 3.0 35 16-50 88-122 (330)
110 2hnk_A SAM-dependent O-methylt 83.5 1 3.4E-05 27.5 3.0 33 15-47 146-181 (239)
111 3doc_A Glyceraldehyde 3-phosph 83.4 1 3.6E-05 29.6 3.1 35 16-50 91-125 (335)
112 3ids_C GAPDH, glyceraldehyde-3 83.3 1.1 3.7E-05 29.8 3.2 35 16-50 103-137 (359)
113 1nvm_B Acetaldehyde dehydrogen 83.3 1.2 4.1E-05 28.8 3.4 31 15-45 70-102 (312)
114 3dou_A Ribosomal RNA large sub 83.1 1.3 4.3E-05 26.3 3.2 32 15-46 90-138 (191)
115 1o54_A SAM-dependent O-methylt 83.0 1.1 3.7E-05 28.0 3.1 33 15-47 180-213 (277)
116 3mb5_A SAM-dependent methyltra 82.8 1.2 4.2E-05 27.2 3.2 34 15-48 161-195 (255)
117 2ld4_A Anamorsin; methyltransf 82.8 1.3 4.3E-05 25.5 3.1 32 15-46 62-100 (176)
118 3eey_A Putative rRNA methylase 82.3 1.3 4.4E-05 25.9 3.1 35 14-48 91-140 (197)
119 2ep7_A GAPDH, glyceraldehyde-3 82.0 1.2 4E-05 29.4 3.0 36 16-51 89-124 (342)
120 3lbf_A Protein-L-isoaspartate 81.8 0.36 1.2E-05 28.7 0.5 32 15-46 142-173 (210)
121 2d2i_A Glyceraldehyde 3-phosph 81.8 1.6 5.4E-05 29.2 3.6 35 16-50 91-125 (380)
122 1r18_A Protein-L-isoaspartate( 81.7 0.5 1.7E-05 28.6 1.1 32 15-46 162-193 (227)
123 3euw_A MYO-inositol dehydrogen 81.6 2.5 8.7E-05 27.2 4.5 71 15-89 64-143 (344)
124 3oj0_A Glutr, glutamyl-tRNA re 81.6 0.37 1.3E-05 27.1 0.5 34 16-50 80-113 (144)
125 3evn_A Oxidoreductase, GFO/IDH 81.6 4.4 0.00015 26.0 5.6 71 15-89 66-145 (329)
126 3fhl_A Putative oxidoreductase 81.5 2.7 9.3E-05 27.4 4.6 71 15-89 64-143 (362)
127 1i1n_A Protein-L-isoaspartate 81.5 0.52 1.8E-05 28.4 1.1 33 15-47 150-182 (226)
128 1fbn_A MJ fibrillarin homologu 81.3 1.6 5.3E-05 26.5 3.2 32 15-46 142-177 (230)
129 4dib_A GAPDH, glyceraldehyde 3 81.0 1.1 3.7E-05 29.6 2.5 36 15-50 90-125 (345)
130 1obf_O Glyceraldehyde 3-phosph 80.9 1.7 5.8E-05 28.6 3.4 36 15-50 90-125 (335)
131 3b1j_A Glyceraldehyde 3-phosph 80.8 1.8 6.2E-05 28.4 3.6 35 16-50 91-125 (339)
132 2gpy_A O-methyltransferase; st 80.5 0.83 2.8E-05 27.7 1.8 33 15-47 125-160 (233)
133 4fb5_A Probable oxidoreductase 80.0 9.8 0.00034 24.6 7.8 72 14-89 92-172 (393)
134 2yv3_A Aspartate-semialdehyde 79.8 2.1 7.2E-05 27.9 3.6 33 16-48 61-93 (331)
135 1jg1_A PIMT;, protein-L-isoasp 79.7 0.59 2E-05 28.4 1.0 32 16-47 158-189 (235)
136 3gdo_A Uncharacterized oxidore 79.2 3.7 0.00013 26.8 4.7 71 15-89 64-143 (358)
137 1g8a_A Fibrillarin-like PRE-rR 79.1 2.2 7.5E-05 25.6 3.4 32 15-46 142-177 (227)
138 3cbg_A O-methyltransferase; cy 79.0 1.8 6E-05 26.4 2.9 33 15-47 147-182 (232)
139 3btv_A Galactose/lactose metab 78.8 12 0.0004 25.2 7.1 72 15-89 88-173 (438)
140 3m33_A Uncharacterized protein 78.3 0.78 2.7E-05 27.7 1.2 34 15-48 110-143 (226)
141 3q2i_A Dehydrogenase; rossmann 78.2 3.4 0.00012 26.8 4.2 71 15-89 74-153 (354)
142 1gpj_A Glutamyl-tRNA reductase 78.1 3.2 0.00011 27.7 4.2 35 16-50 227-267 (404)
143 2plw_A Ribosomal RNA methyltra 77.9 3.5 0.00012 24.0 4.0 18 29-46 136-153 (201)
144 3dr5_A Putative O-methyltransf 77.7 1.5 5.1E-05 26.6 2.3 34 14-47 127-163 (221)
145 2avd_A Catechol-O-methyltransf 77.5 2.3 7.8E-05 25.5 3.1 34 15-48 144-180 (229)
146 3e82_A Putative oxidoreductase 77.4 12 0.00042 24.3 7.9 71 15-89 66-145 (364)
147 3e5r_O PP38, glyceraldehyde-3- 77.0 2.2 7.7E-05 27.9 3.1 34 16-49 93-126 (337)
148 2fk8_A Methoxy mycolic acid sy 76.5 4.6 0.00016 25.6 4.5 34 15-48 154-195 (318)
149 2b4r_O Glyceraldehyde-3-phosph 76.4 2.4 8.1E-05 28.0 3.1 35 16-50 99-133 (345)
150 3mti_A RRNA methylase; SAM-dep 76.3 1.4 4.6E-05 25.5 1.8 36 14-49 87-137 (185)
151 1vl5_A Unknown conserved prote 76.2 2.5 8.5E-05 25.9 3.1 33 15-47 102-140 (260)
152 2ozp_A N-acetyl-gamma-glutamyl 75.7 4.5 0.00015 26.5 4.3 34 15-48 67-100 (345)
153 2g82_O GAPDH, glyceraldehyde-3 75.6 1.9 6.6E-05 28.2 2.5 35 16-50 86-120 (331)
154 1vbf_A 231AA long hypothetical 75.6 0.99 3.4E-05 27.2 1.1 33 15-47 133-165 (231)
155 1b7g_O Protein (glyceraldehyde 75.4 4 0.00014 26.7 4.0 34 16-49 77-110 (340)
156 2r00_A Aspartate-semialdehyde 75.3 3.8 0.00013 26.8 3.8 33 16-48 65-97 (336)
157 2pxx_A Uncharacterized protein 75.2 1.7 5.7E-05 25.6 2.0 21 28-48 140-160 (215)
158 4df3_A Fibrillarin-like rRNA/T 74.8 2.8 9.6E-05 26.0 3.0 32 15-46 146-181 (233)
159 3pwk_A Aspartate-semialdehyde 74.4 5 0.00017 26.6 4.3 34 15-48 63-96 (366)
160 3ezy_A Dehydrogenase; structur 73.9 15 0.00051 23.6 8.2 71 15-89 63-142 (344)
161 1mjf_A Spermidine synthase; sp 73.5 4.3 0.00015 25.5 3.7 34 14-47 150-193 (281)
162 4hg2_A Methyltransferase type 73.2 2.7 9.3E-05 26.2 2.7 34 15-48 98-136 (257)
163 3cvo_A Methyltransferase-like 73.0 4 0.00014 24.8 3.3 31 15-45 121-152 (202)
164 3r3h_A O-methyltransferase, SA 72.9 6.9 0.00024 24.0 4.5 34 15-48 135-171 (242)
165 1nt2_A Fibrillarin-like PRE-rR 72.9 3.4 0.00012 24.8 3.0 32 15-46 125-160 (210)
166 1kpg_A CFA synthase;, cyclopro 72.8 5.5 0.00019 24.7 4.1 34 15-48 128-169 (287)
167 3f4l_A Putative oxidoreductase 72.7 15 0.00053 23.6 6.3 71 15-89 64-143 (345)
168 3v5n_A Oxidoreductase; structu 72.5 7.1 0.00024 26.1 4.7 71 15-89 109-188 (417)
169 3moi_A Probable dehydrogenase; 72.5 5.1 0.00017 26.4 4.0 72 15-90 63-143 (387)
170 4had_A Probable oxidoreductase 72.5 16 0.00056 23.4 8.0 72 14-89 84-164 (350)
171 4dpl_A Malonyl-COA/succinyl-CO 72.2 7.1 0.00024 25.8 4.6 34 15-48 78-111 (359)
172 4dpk_A Malonyl-COA/succinyl-CO 72.2 7.1 0.00024 25.8 4.6 34 15-48 78-111 (359)
173 2dc1_A L-aspartate dehydrogena 72.0 9.1 0.00031 23.3 4.9 31 15-45 49-79 (236)
174 3mz0_A Inositol 2-dehydrogenas 71.9 6.4 0.00022 25.4 4.3 71 15-89 65-145 (344)
175 3ou2_A SAM-dependent methyltra 71.9 3.7 0.00013 24.1 3.0 35 15-49 106-148 (218)
176 1xj5_A Spermidine synthase 1; 71.6 4.1 0.00014 26.6 3.3 33 14-46 192-234 (334)
177 2f1f_A Acetolactate synthase i 71.5 6.3 0.00021 23.1 3.8 29 19-47 121-149 (164)
178 2ixa_A Alpha-N-acetylgalactosa 71.4 9.3 0.00032 25.7 5.1 76 10-89 84-169 (444)
179 1yb2_A Hypothetical protein TA 71.3 3.3 0.00011 25.8 2.8 34 15-48 178-212 (275)
180 3d4o_A Dipicolinate synthase s 71.3 8 0.00027 24.5 4.6 52 15-68 212-263 (293)
181 3oig_A Enoyl-[acyl-carrier-pro 71.2 8.5 0.00029 23.6 4.7 17 32-48 132-148 (266)
182 1sui_A Caffeoyl-COA O-methyltr 71.2 10 0.00034 23.3 4.9 33 15-47 155-190 (247)
183 3h9u_A Adenosylhomocysteinase; 70.8 1.8 6.3E-05 29.5 1.6 46 16-63 266-312 (436)
184 4ew6_A D-galactose-1-dehydroge 70.8 18 0.00062 23.2 6.6 71 15-89 80-159 (330)
185 1cf2_P Protein (glyceraldehyde 70.8 5.5 0.00019 26.0 3.8 32 16-47 78-109 (337)
186 3tr6_A O-methyltransferase; ce 70.6 4.7 0.00016 24.0 3.3 34 15-48 139-175 (225)
187 3vc1_A Geranyl diphosphate 2-C 70.4 3.5 0.00012 26.1 2.8 34 15-48 184-222 (312)
188 3dty_A Oxidoreductase, GFO/IDH 70.2 21 0.0007 23.6 7.5 71 15-89 84-163 (398)
189 4dmg_A Putative uncharacterize 70.1 4.8 0.00017 26.9 3.5 35 16-50 280-329 (393)
190 3tz6_A Aspartate-semialdehyde 70.0 7.4 0.00025 25.6 4.3 34 15-48 62-95 (344)
191 1h6d_A Precursor form of gluco 70.0 7.4 0.00025 26.2 4.4 71 15-89 149-228 (433)
192 3grk_A Enoyl-(acyl-carrier-pro 69.8 12 0.00041 23.5 5.2 34 15-48 108-170 (293)
193 3cps_A Glyceraldehyde 3-phosph 69.8 3.8 0.00013 27.1 2.9 34 16-49 105-138 (354)
194 3ujc_A Phosphoethanolamine N-m 69.6 2.3 8E-05 25.9 1.8 34 15-48 119-160 (266)
195 3cmc_O GAPDH, glyceraldehyde-3 69.4 4.3 0.00015 26.6 3.0 34 16-49 88-121 (334)
196 1hdg_O Holo-D-glyceraldehyde-3 69.2 4.3 0.00015 26.6 3.0 34 16-49 89-122 (332)
197 2nxc_A L11 mtase, ribosomal pr 69.1 2.6 8.9E-05 26.1 1.9 36 14-49 182-220 (254)
198 3trk_A Nonstructural polyprote 68.5 1.9 6.6E-05 27.7 1.2 34 15-48 210-260 (324)
199 2g1u_A Hypothetical protein TM 68.4 5.4 0.00018 22.5 3.1 33 15-47 83-116 (155)
200 2czc_A Glyceraldehyde-3-phosph 68.3 8.5 0.00029 25.0 4.3 33 16-49 79-111 (334)
201 2kw5_A SLR1183 protein; struct 68.0 3.5 0.00012 24.1 2.3 34 15-48 93-132 (202)
202 3sso_A Methyltransferase; macr 67.6 3.2 0.00011 28.2 2.2 34 15-48 287-325 (419)
203 2b2c_A Spermidine synthase; be 67.5 6.1 0.00021 25.5 3.5 34 14-47 179-222 (314)
204 3hem_A Cyclopropane-fatty-acyl 67.5 7.9 0.00027 24.3 4.0 34 15-48 136-184 (302)
205 3oqb_A Oxidoreductase; structu 67.4 23 0.00079 23.1 6.5 71 15-89 82-161 (383)
206 1zx0_A Guanidinoacetate N-meth 67.4 3.3 0.00011 25.1 2.1 34 14-47 126-170 (236)
207 3dr3_A N-acetyl-gamma-glutamyl 67.2 9.2 0.00031 25.1 4.3 34 15-48 74-107 (337)
208 2nvw_A Galactose/lactose metab 67.2 27 0.00093 23.9 7.5 72 15-89 107-193 (479)
209 3hnr_A Probable methyltransfer 67.2 11 0.00037 22.2 4.4 33 15-47 105-145 (220)
210 4h3v_A Oxidoreductase domain p 67.2 22 0.00077 22.9 7.3 76 11-90 69-157 (390)
211 3evz_A Methyltransferase; NYSG 67.1 4.1 0.00014 24.3 2.5 19 28-46 160-178 (230)
212 1yzh_A TRNA (guanine-N(7)-)-me 67.1 12 0.0004 22.1 4.5 33 15-47 110-156 (214)
213 3gjy_A Spermidine synthase; AP 67.1 5.7 0.00019 25.8 3.2 35 14-48 157-201 (317)
214 1dl5_A Protein-L-isoaspartate 67.1 1.9 6.5E-05 27.6 1.0 33 15-47 143-175 (317)
215 3g07_A 7SK snRNA methylphospha 67.0 3.7 0.00013 25.9 2.4 33 14-46 175-219 (292)
216 1lc0_A Biliverdin reductase A; 67.0 21 0.00072 22.5 6.6 72 14-89 63-143 (294)
217 3c3y_A Pfomt, O-methyltransfer 67.0 10 0.00035 23.0 4.3 33 15-47 146-181 (237)
218 2qy6_A UPF0209 protein YFCK; s 66.9 2.6 9E-05 26.4 1.6 32 16-47 173-213 (257)
219 2cmg_A Spermidine synthase; tr 66.7 3.5 0.00012 25.9 2.2 32 16-47 139-171 (262)
220 1xxl_A YCGJ protein; structura 66.7 5.6 0.00019 24.1 3.1 34 15-48 86-125 (239)
221 2ep5_A 350AA long hypothetical 66.5 8.5 0.00029 25.2 4.0 33 15-47 76-108 (350)
222 2gb4_A Thiopurine S-methyltran 66.4 5.7 0.00019 24.6 3.1 33 15-47 151-191 (252)
223 2b25_A Hypothetical protein; s 66.3 2.6 8.9E-05 27.1 1.6 32 16-47 187-219 (336)
224 2hjs_A USG-1 protein homolog; 66.3 6.8 0.00023 25.6 3.5 34 15-48 67-100 (340)
225 3n58_A Adenosylhomocysteinase; 65.9 5 0.00017 27.7 2.9 35 16-50 302-337 (464)
226 1t4b_A Aspartate-semialdehyde 65.9 7 0.00024 25.9 3.6 26 16-41 65-90 (367)
227 2aot_A HMT, histamine N-methyl 65.9 5.3 0.00018 25.0 2.9 34 14-47 133-172 (292)
228 2o57_A Putative sarcosine dime 65.8 5.7 0.0002 24.8 3.1 34 15-48 149-188 (297)
229 1nkv_A Hypothetical protein YJ 65.7 2.5 8.5E-05 25.7 1.3 33 15-47 102-140 (256)
230 1wg8_A Predicted S-adenosylmet 65.0 2.6 9E-05 27.1 1.3 22 29-50 215-236 (285)
231 4dio_A NAD(P) transhydrogenase 64.9 6.3 0.00022 26.6 3.2 59 15-73 274-341 (405)
232 3sm3_A SAM-dependent methyltra 64.7 2.5 8.7E-05 25.2 1.2 34 15-48 100-142 (235)
233 3dli_A Methyltransferase; PSI- 64.7 12 0.00042 22.4 4.4 34 14-47 99-140 (240)
234 3ic5_A Putative saccharopine d 64.1 11 0.00038 19.6 3.7 31 16-46 69-99 (118)
235 2p2s_A Putative oxidoreductase 64.0 26 0.00087 22.4 8.5 71 15-89 65-145 (336)
236 3i9f_A Putative type 11 methyl 64.0 5.3 0.00018 22.6 2.5 34 15-48 74-113 (170)
237 1g0o_A Trihydroxynaphthalene r 63.8 20 0.00068 22.2 5.3 34 15-48 106-164 (283)
238 3dxy_A TRNA (guanine-N(7)-)-me 63.8 10 0.00035 22.8 3.8 19 29-47 132-150 (218)
239 1xea_A Oxidoreductase, GFO/IDH 63.8 6.9 0.00024 25.0 3.2 71 15-89 62-141 (323)
240 1o9g_A RRNA methyltransferase; 63.8 19 0.00064 21.9 5.1 35 15-49 167-216 (250)
241 3v2g_A 3-oxoacyl-[acyl-carrier 63.7 20 0.00069 22.2 5.3 34 15-48 108-166 (271)
242 3l8d_A Methyltransferase; stru 63.6 7.3 0.00025 23.3 3.2 34 15-48 115-154 (242)
243 1l3i_A Precorrin-6Y methyltran 63.5 5.1 0.00018 22.8 2.4 34 15-48 99-135 (192)
244 3f4k_A Putative methyltransfer 63.5 2.3 7.8E-05 25.9 0.9 33 15-47 113-150 (257)
245 2yqz_A Hypothetical protein TT 63.2 5.7 0.0002 24.1 2.7 32 15-46 103-140 (263)
246 1ys4_A Aspartate-semialdehyde 63.2 11 0.00036 24.8 4.0 32 16-47 83-114 (354)
247 3ohs_X Trans-1,2-dihydrobenzen 62.8 27 0.00092 22.3 8.3 71 15-89 65-144 (334)
248 3is3_A 17BETA-hydroxysteroid d 62.8 17 0.00059 22.4 4.8 35 15-49 95-154 (270)
249 2ipx_A RRNA 2'-O-methyltransfe 62.8 7.6 0.00026 23.3 3.1 32 15-46 146-181 (233)
250 3ond_A Adenosylhomocysteinase; 62.7 2.8 9.4E-05 29.1 1.2 35 15-49 319-354 (488)
251 3ec7_A Putative dehydrogenase; 62.7 29 0.00098 22.5 7.4 72 15-90 86-167 (357)
252 4fgs_A Probable dehydrogenase 62.6 5.7 0.00019 25.2 2.6 42 6-48 94-160 (273)
253 3oa2_A WBPB; oxidoreductase, s 62.6 27 0.00094 22.3 7.8 72 14-89 71-151 (318)
254 1zh8_A Oxidoreductase; TM0312, 62.6 28 0.00096 22.4 8.5 71 15-89 81-160 (340)
255 2rir_A Dipicolinate synthase, 62.5 11 0.00037 23.9 3.9 52 15-68 214-265 (300)
256 1iy9_A Spermidine synthase; ro 62.3 7.6 0.00026 24.4 3.1 34 14-47 146-189 (275)
257 3dlc_A Putative S-adenosyl-L-m 61.9 8 0.00027 22.6 3.1 34 15-48 110-149 (219)
258 3e8s_A Putative SAM dependent 61.9 7.3 0.00025 22.9 2.9 33 16-48 116-153 (227)
259 3e23_A Uncharacterized protein 61.8 5.2 0.00018 23.5 2.2 33 15-47 101-141 (211)
260 2p41_A Type II methyltransfera 61.8 13 0.00044 23.8 4.2 32 15-46 147-190 (305)
261 3h2b_A SAM-dependent methyltra 61.1 6.5 0.00022 22.9 2.6 33 15-47 101-141 (203)
262 3tka_A Ribosomal RNA small sub 60.8 4.6 0.00016 26.7 1.9 21 29-49 256-276 (347)
263 2vdw_A Vaccinia virus capping 60.4 7.2 0.00024 24.9 2.8 33 15-47 128-169 (302)
264 1ixk_A Methyltransferase; open 60.4 10 0.00036 24.2 3.6 21 28-48 227-247 (315)
265 1dus_A MJ0882; hypothetical pr 60.2 10 0.00035 21.5 3.3 35 15-49 118-159 (194)
266 2yxl_A PH0851 protein, 450AA l 59.8 6.6 0.00023 26.5 2.7 21 28-48 370-390 (450)
267 3m4x_A NOL1/NOP2/SUN family pr 59.7 15 0.00051 25.1 4.4 21 28-48 215-235 (456)
268 2pc6_A Probable acetolactate s 59.7 7.4 0.00025 22.9 2.5 25 19-43 122-146 (165)
269 3hja_A GAPDH, glyceraldehyde-3 59.6 2.3 7.7E-05 28.3 0.3 35 16-50 107-146 (356)
270 2fca_A TRNA (guanine-N(7)-)-me 59.6 20 0.00069 21.3 4.6 33 15-47 107-153 (213)
271 3dh0_A SAM dependent methyltra 59.4 7.4 0.00025 22.9 2.6 34 15-48 105-144 (219)
272 1xyg_A Putative N-acetyl-gamma 59.0 8.8 0.0003 25.3 3.1 32 16-48 82-113 (359)
273 3bkw_A MLL3908 protein, S-aden 59.0 9.4 0.00032 22.8 3.1 33 15-47 106-144 (243)
274 3bwc_A Spermidine synthase; SA 58.9 8.2 0.00028 24.6 2.9 34 14-47 167-210 (304)
275 2yyy_A Glyceraldehyde-3-phosph 58.8 11 0.00038 24.7 3.5 33 16-49 81-114 (343)
276 1p9l_A Dihydrodipicolinate red 58.7 16 0.00056 22.7 4.1 33 16-49 45-77 (245)
277 1inl_A Spermidine synthase; be 58.7 7.5 0.00026 24.7 2.7 34 14-47 161-205 (296)
278 3u5t_A 3-oxoacyl-[acyl-carrier 58.6 13 0.00046 23.0 3.8 34 15-48 104-162 (267)
279 3adn_A Spermidine synthase; am 58.6 8.2 0.00028 24.6 2.8 33 15-47 156-198 (294)
280 2frn_A Hypothetical protein PH 58.4 9.2 0.00031 23.9 3.0 34 15-48 191-226 (278)
281 3g5t_A Trans-aconitate 3-methy 58.4 8.9 0.0003 24.0 3.0 33 15-47 112-149 (299)
282 2o07_A Spermidine synthase; st 58.3 7.6 0.00026 24.8 2.6 34 14-47 166-209 (304)
283 3lcc_A Putative methyl chlorid 58.2 9 0.00031 22.9 2.9 33 16-48 132-172 (235)
284 2i7c_A Spermidine synthase; tr 57.9 11 0.00037 23.8 3.3 35 14-48 149-193 (283)
285 2xvm_A Tellurite resistance pr 57.5 7.5 0.00026 22.4 2.4 33 15-47 96-136 (199)
286 1r0k_A 1-deoxy-D-xylulose 5-ph 57.2 31 0.0011 23.2 5.4 30 17-46 94-123 (388)
287 3m70_A Tellurite resistance pr 57.2 10 0.00035 23.5 3.1 33 15-47 183-223 (286)
288 1ooe_A Dihydropteridine reduct 56.8 27 0.00092 20.9 4.9 42 7-48 62-130 (236)
289 1sqg_A SUN protein, FMU protei 56.8 7.9 0.00027 26.0 2.6 21 28-48 355-375 (429)
290 3k31_A Enoyl-(acyl-carrier-pro 56.7 17 0.00059 22.8 4.1 12 15-26 107-118 (296)
291 2ip2_A Probable phenazine-spec 56.6 21 0.00072 22.7 4.6 34 15-48 232-273 (334)
292 2vdv_E TRNA (guanine-N(7)-)-me 56.3 11 0.00037 22.9 3.0 20 28-47 154-173 (246)
293 2hqb_A Transcriptional activat 56.2 34 0.0012 21.4 6.2 76 7-91 172-248 (296)
294 2p35_A Trans-aconitate 2-methy 56.2 5.7 0.0002 24.1 1.8 33 15-47 94-132 (259)
295 3opn_A Putative hemolysin; str 56.0 3.9 0.00013 25.1 1.0 20 27-46 117-136 (232)
296 2fgc_A Acetolactate synthase, 55.8 9.2 0.00032 23.1 2.5 25 19-43 148-172 (193)
297 3g89_A Ribosomal RNA small sub 55.5 8.3 0.00028 23.8 2.4 33 15-47 150-184 (249)
298 3p9n_A Possible methyltransfer 55.4 21 0.00073 20.5 4.1 35 14-48 111-154 (189)
299 4gqa_A NAD binding oxidoreduct 55.3 42 0.0014 22.1 8.0 72 14-89 94-174 (412)
300 2ex4_A Adrenal gland protein A 55.3 9.3 0.00032 23.0 2.6 32 16-47 146-185 (241)
301 1dhr_A Dihydropteridine reduct 55.1 25 0.00084 21.2 4.5 20 7-26 66-86 (241)
302 2zfu_A Nucleomethylin, cerebra 55.0 9.9 0.00034 22.3 2.7 34 15-48 114-152 (215)
303 3ocj_A Putative exported prote 55.0 14 0.00048 23.2 3.5 34 15-48 186-228 (305)
304 3uce_A Dehydrogenase; rossmann 54.7 21 0.00073 21.2 4.1 34 15-48 58-117 (223)
305 1dih_A Dihydrodipicolinate red 54.6 22 0.00075 22.4 4.3 33 16-49 72-104 (273)
306 3m2t_A Probable dehydrogenase; 54.5 29 0.001 22.5 5.0 71 15-89 67-146 (359)
307 1ri5_A MRNA capping enzyme; me 54.4 11 0.00037 23.3 2.9 33 15-47 132-174 (298)
308 3lpm_A Putative methyltransfer 54.4 14 0.00049 22.6 3.4 19 29-47 158-176 (259)
309 3ajd_A Putative methyltransfer 54.4 18 0.00063 22.5 3.9 21 28-48 192-212 (274)
310 1jw9_B Molybdopterin biosynthe 54.4 11 0.00038 23.3 2.9 26 16-41 121-146 (249)
311 3kkz_A Uncharacterized protein 54.3 6.9 0.00024 24.0 1.9 34 15-48 113-151 (267)
312 3g5l_A Putative S-adenosylmeth 54.1 12 0.00042 22.6 3.0 32 15-46 107-144 (253)
313 2i62_A Nicotinamide N-methyltr 54.1 7.4 0.00025 23.6 2.0 34 15-48 156-199 (265)
314 3cgg_A SAM-dependent methyltra 53.9 16 0.00055 20.7 3.4 33 15-47 106-147 (195)
315 3dfz_A SIRC, precorrin-2 dehyd 53.9 26 0.00088 21.5 4.4 56 15-71 90-146 (223)
316 3pfg_A N-methyltransferase; N, 53.8 6.8 0.00023 23.9 1.8 32 15-46 109-150 (263)
317 3mgg_A Methyltransferase; NYSG 53.7 10 0.00035 23.3 2.7 33 15-47 104-142 (276)
318 3c8m_A Homoserine dehydrogenas 53.6 22 0.00076 23.0 4.3 31 15-45 85-119 (331)
319 2xyq_A Putative 2'-O-methyl tr 53.6 11 0.00038 24.1 2.8 20 28-47 152-171 (290)
320 1fjh_A 3alpha-hydroxysteroid d 53.5 27 0.00093 21.1 4.5 34 15-48 61-114 (257)
321 3pzr_A Aspartate-semialdehyde 53.5 21 0.00071 23.8 4.2 34 15-48 63-98 (370)
322 3r3s_A Oxidoreductase; structu 53.2 25 0.00086 22.0 4.4 34 15-48 127-186 (294)
323 2bm8_A Cephalosporin hydroxyla 53.2 17 0.00059 22.1 3.6 32 16-47 152-187 (236)
324 1j5p_A Aspartate dehydrogenase 53.1 21 0.00071 22.5 3.9 31 16-47 60-91 (253)
325 1ws6_A Methyltransferase; stru 53.0 13 0.00046 20.6 2.9 35 15-49 109-149 (171)
326 3upl_A Oxidoreductase; rossman 53.0 37 0.0013 23.3 5.4 77 10-89 100-184 (446)
327 1xtp_A LMAJ004091AAA; SGPP, st 53.0 11 0.00036 22.8 2.6 33 15-47 157-197 (254)
328 3s99_A Basic membrane lipoprot 52.9 46 0.0016 21.8 7.6 75 7-92 199-274 (356)
329 4htf_A S-adenosylmethionine-de 52.8 12 0.00041 23.1 2.9 34 14-47 134-173 (285)
330 2nqt_A N-acetyl-gamma-glutamyl 52.8 14 0.00048 24.3 3.2 32 16-48 80-111 (352)
331 4dcm_A Ribosomal RNA large sub 52.7 14 0.00047 24.4 3.2 36 15-50 291-337 (375)
332 3ntv_A MW1564 protein; rossman 52.6 6.6 0.00023 23.7 1.6 34 14-47 140-176 (232)
333 2ozv_A Hypothetical protein AT 52.3 12 0.00041 23.1 2.8 19 29-47 152-170 (260)
334 3ckk_A TRNA (guanine-N(7)-)-me 52.3 15 0.0005 22.4 3.2 33 15-47 122-168 (235)
335 4fs3_A Enoyl-[acyl-carrier-pro 52.2 35 0.0012 20.9 4.9 15 34-48 133-147 (256)
336 2oxt_A Nucleoside-2'-O-methylt 52.1 23 0.0008 22.1 4.1 33 14-46 138-184 (265)
337 3ijr_A Oxidoreductase, short c 51.9 35 0.0012 21.3 4.9 34 15-48 124-183 (291)
338 3hsk_A Aspartate-semialdehyde 51.7 19 0.00064 24.1 3.7 33 16-48 93-125 (381)
339 3mvn_A UDP-N-acetylmuramate:L- 51.3 26 0.00089 20.0 4.0 31 16-46 36-69 (163)
340 3c6k_A Spermine synthase; sper 51.1 20 0.00067 24.1 3.7 45 4-48 270-332 (381)
341 1ve3_A Hypothetical protein PH 50.6 13 0.00044 21.9 2.7 33 15-47 102-142 (227)
342 3ip3_A Oxidoreductase, putativ 50.5 47 0.0016 21.2 5.5 71 15-89 66-147 (337)
343 1f06_A MESO-diaminopimelate D- 50.3 20 0.0007 23.0 3.7 33 15-48 57-89 (320)
344 1vm6_A DHPR, dihydrodipicolina 50.2 20 0.0007 22.2 3.5 34 16-50 53-86 (228)
345 1ebf_A Homoserine dehydrogenas 49.9 13 0.00045 24.5 2.8 30 16-45 84-113 (358)
346 3ksu_A 3-oxoacyl-acyl carrier 49.7 16 0.00056 22.4 3.1 12 15-26 90-101 (262)
347 3edm_A Short chain dehydrogena 49.6 18 0.00063 22.1 3.3 12 15-26 85-96 (259)
348 3orh_A Guanidinoacetate N-meth 49.4 6.1 0.00021 24.0 1.1 33 15-47 127-170 (236)
349 1vpd_A Tartronate semialdehyde 49.0 29 0.001 21.6 4.3 32 16-47 61-99 (299)
350 3n5m_A Adenosylmethionine-8-am 48.9 41 0.0014 22.3 5.1 34 4-38 95-128 (452)
351 3ccf_A Cyclopropane-fatty-acyl 48.8 16 0.00056 22.5 3.0 33 15-47 116-154 (279)
352 3o9z_A Lipopolysaccaride biosy 48.5 50 0.0017 21.0 8.4 70 14-87 70-148 (312)
353 3bzb_A Uncharacterized protein 48.4 31 0.0011 21.5 4.3 34 14-47 161-205 (281)
354 3uw3_A Aspartate-semialdehyde 48.3 27 0.00091 23.3 4.1 33 16-48 68-102 (377)
355 3orf_A Dihydropteridine reduct 48.2 43 0.0015 20.3 4.9 34 15-48 86-145 (251)
356 2igt_A SAM dependent methyltra 48.2 43 0.0015 21.6 5.0 34 14-47 223-272 (332)
357 1wxx_A TT1595, hypothetical pr 48.0 30 0.001 22.7 4.3 21 29-49 307-327 (382)
358 2pt6_A Spermidine synthase; tr 47.7 17 0.00058 23.4 3.0 34 14-47 187-230 (321)
359 2wa2_A Non-structural protein 47.6 29 0.001 21.8 4.0 33 14-46 146-192 (276)
360 4gua_A Non-structural polyprot 47.4 13 0.00044 26.6 2.5 34 15-48 220-270 (670)
361 3c3p_A Methyltransferase; NP_9 47.2 7.8 0.00027 22.8 1.3 31 17-47 127-160 (210)
362 3bio_A Oxidoreductase, GFO/IDH 46.7 30 0.001 22.0 4.0 74 15-89 64-142 (304)
363 3p2y_A Alanine dehydrogenase/p 46.6 13 0.00043 25.0 2.3 58 15-72 264-330 (381)
364 3mtj_A Homoserine dehydrogenas 46.3 38 0.0013 23.2 4.6 30 15-44 77-107 (444)
365 3jwh_A HEN1; methyltransferase 46.2 15 0.00053 21.6 2.5 32 15-46 101-140 (217)
366 4eso_A Putative oxidoreductase 46.0 23 0.0008 21.6 3.4 34 15-48 81-139 (255)
367 3pxx_A Carveol dehydrogenase; 45.8 39 0.0013 20.8 4.4 34 15-48 98-154 (287)
368 1uir_A Polyamine aminopropyltr 45.7 18 0.00062 23.1 2.9 34 14-47 149-195 (314)
369 2a14_A Indolethylamine N-methy 45.6 7.2 0.00024 24.1 1.0 33 16-48 156-198 (263)
370 4gek_A TRNA (CMO5U34)-methyltr 45.6 10 0.00035 23.6 1.7 19 29-47 160-178 (261)
371 4dry_A 3-oxoacyl-[acyl-carrier 45.6 40 0.0014 21.0 4.4 19 7-26 103-121 (281)
372 2frx_A Hypothetical protein YE 45.4 29 0.00099 23.8 4.0 20 29-48 228-247 (479)
373 3jwg_A HEN1, methyltransferase 45.3 22 0.00075 20.9 3.1 32 15-46 101-140 (219)
374 2ho3_A Oxidoreductase, GFO/IDH 45.3 56 0.0019 20.7 7.0 71 15-89 61-140 (325)
375 3id6_C Fibrillarin-like rRNA/T 45.2 21 0.0007 22.0 3.0 32 15-46 145-180 (232)
376 4dzr_A Protein-(glutamine-N5) 45.1 12 0.00042 21.7 2.0 19 29-47 146-164 (215)
377 4f3y_A DHPR, dihydrodipicolina 45.0 20 0.0007 22.7 3.0 33 16-49 73-105 (272)
378 3gju_A Putative aminotransfera 44.7 49 0.0017 22.0 5.0 35 4-38 99-133 (460)
379 3ijp_A DHPR, dihydrodipicolina 44.4 22 0.00075 22.8 3.1 33 16-49 88-120 (288)
380 3a27_A TYW2, uncharacterized p 44.3 17 0.0006 22.6 2.6 32 16-47 186-219 (272)
381 1m6y_A S-adenosyl-methyltransf 44.2 5.5 0.00019 25.6 0.3 21 29-49 227-247 (301)
382 2qfm_A Spermine synthase; sper 44.2 26 0.00089 23.3 3.5 46 4-49 253-316 (364)
383 3mtq_A Putative phosphoenolpyr 44.0 44 0.0015 19.3 4.1 9 41-49 79-87 (159)
384 4a6r_A Omega transaminase; tra 43.7 61 0.0021 21.6 5.3 36 4-39 98-133 (459)
385 2ejw_A HDH, homoserine dehydro 43.5 34 0.0011 22.3 3.9 30 16-45 66-96 (332)
386 3grz_A L11 mtase, ribosomal pr 43.2 5.3 0.00018 23.4 0.1 34 15-48 124-160 (205)
387 3ggd_A SAM-dependent methyltra 43.0 21 0.00073 21.3 2.9 33 16-48 124-164 (245)
388 4fsd_A Arsenic methyltransfera 42.9 22 0.00075 23.3 3.0 33 15-47 165-203 (383)
389 3lt0_A Enoyl-ACP reductase; tr 42.9 35 0.0012 21.8 3.9 43 5-48 103-172 (329)
390 3ege_A Putative methyltransfer 42.7 39 0.0013 20.5 4.0 33 15-48 93-131 (261)
391 3tfu_A Adenosylmethionine-8-am 42.5 54 0.0019 22.0 5.0 35 4-38 122-156 (457)
392 3npg_A Uncharacterized DUF364 42.3 61 0.0021 20.2 5.7 69 16-89 164-235 (249)
393 1xdz_A Methyltransferase GIDB; 42.2 16 0.00055 22.0 2.2 32 15-46 140-173 (240)
394 1vef_A Acetylornithine/acetyl- 42.2 63 0.0022 20.7 5.1 44 4-47 91-137 (395)
395 3hmu_A Aminotransferase, class 42.2 64 0.0022 21.8 5.3 36 4-39 103-138 (472)
396 3d7l_A LIN1944 protein; APC893 42.1 27 0.00093 20.1 3.1 12 15-26 57-68 (202)
397 2dul_A N(2),N(2)-dimethylguano 42.0 39 0.0014 22.3 4.1 33 15-47 130-164 (378)
398 3dmg_A Probable ribosomal RNA 41.6 27 0.00091 23.2 3.3 36 15-50 297-343 (381)
399 4b79_A PA4098, probable short- 41.6 61 0.0021 20.1 5.2 41 7-48 70-134 (242)
400 1ydw_A AX110P-like protein; st 41.6 67 0.0023 20.7 5.2 31 15-46 70-100 (362)
401 3i4j_A Aminotransferase, class 41.5 72 0.0025 20.8 5.5 35 4-38 76-110 (430)
402 2qm3_A Predicted methyltransfe 41.3 21 0.00072 23.3 2.8 34 16-49 241-279 (373)
403 1wma_A Carbonyl reductase [NAD 41.2 38 0.0013 20.4 3.8 12 15-26 81-92 (276)
404 2h7i_A Enoyl-[acyl-carrier-pro 41.1 24 0.00081 21.7 2.9 11 16-26 87-97 (269)
405 1tlt_A Putative oxidoreductase 41.0 54 0.0018 20.7 4.6 31 15-46 64-94 (319)
406 3c85_A Putative glutathione-re 40.7 50 0.0017 18.8 4.5 32 15-46 104-138 (183)
407 2pjd_A Ribosomal RNA small sub 40.5 19 0.00066 23.2 2.5 35 15-49 260-305 (343)
408 3lfh_A Manxa, phosphotransfera 40.5 47 0.0016 18.8 3.8 8 41-48 63-70 (144)
409 2g72_A Phenylethanolamine N-me 40.5 9.5 0.00033 23.7 1.0 32 17-48 175-216 (289)
410 2cy8_A D-phgat, D-phenylglycin 40.0 79 0.0027 20.9 5.8 43 4-47 101-146 (453)
411 1pdo_A Mannose permease; phosp 40.0 43 0.0015 18.5 3.6 22 17-39 61-82 (135)
412 3dip_A Enolase; structural gen 39.9 41 0.0014 22.5 4.0 36 5-41 202-240 (410)
413 3i5t_A Aminotransferase; pyrid 39.6 63 0.0021 21.8 4.9 35 4-38 101-135 (476)
414 2epj_A Glutamate-1-semialdehyd 39.2 80 0.0027 20.7 5.8 42 4-46 100-144 (434)
415 3m6w_A RRNA methylase; rRNA me 39.2 39 0.0013 23.2 3.9 20 29-48 211-230 (464)
416 3ny7_A YCHM protein, sulfate t 39.1 45 0.0015 17.8 4.2 45 5-49 35-86 (118)
417 3ke3_A Putative serine-pyruvat 39.1 76 0.0026 20.4 5.4 41 5-46 40-80 (379)
418 4hnl_A Mandelate racemase/muco 39.0 42 0.0014 22.4 4.0 33 5-38 210-242 (421)
419 3u3x_A Oxidoreductase; structu 38.9 78 0.0027 20.5 7.7 71 15-89 87-167 (361)
420 4hpn_A Putative uncharacterize 38.8 44 0.0015 21.9 4.0 33 5-38 177-209 (378)
421 2ptg_A Enoyl-acyl carrier redu 38.7 30 0.001 21.9 3.1 18 7-25 125-142 (319)
422 3do5_A HOM, homoserine dehydro 38.6 50 0.0017 21.5 4.1 31 15-45 79-113 (327)
423 2gdz_A NAD+-dependent 15-hydro 38.6 66 0.0023 19.5 5.1 12 15-26 85-96 (267)
424 3a8u_X Omega-amino acid--pyruv 38.4 67 0.0023 21.2 4.9 35 4-38 97-131 (449)
425 2o56_A Putative mandelate race 38.3 45 0.0016 22.1 4.0 33 4-37 203-235 (407)
426 3bgv_A MRNA CAP guanine-N7 met 38.1 22 0.00075 22.4 2.4 31 16-46 114-154 (313)
427 3lkv_A Uncharacterized conserv 37.9 73 0.0025 19.9 7.6 40 6-48 59-98 (302)
428 2y1h_A Putative deoxyribonucle 37.4 70 0.0024 19.5 5.8 37 14-50 31-69 (272)
429 3p3b_A Mandelate racemase/muco 37.3 53 0.0018 21.7 4.2 38 4-42 189-229 (392)
430 1a4i_A Methylenetetrahydrofola 37.1 11 0.00037 24.5 0.8 33 16-50 208-240 (301)
431 3hp7_A Hemolysin, putative; st 37.0 23 0.0008 22.7 2.4 30 17-46 152-184 (291)
432 3c0k_A UPF0064 protein YCCW; P 36.9 57 0.0019 21.5 4.3 36 14-49 291-341 (396)
433 3stp_A Galactonate dehydratase 36.6 49 0.0017 22.2 4.0 36 5-41 219-257 (412)
434 3v5c_A Mandelate racemase/muco 36.5 55 0.0019 21.7 4.2 35 5-40 190-224 (392)
435 1pjz_A Thiopurine S-methyltran 36.2 20 0.00069 21.0 1.9 31 16-46 101-139 (203)
436 3dtn_A Putative methyltransfer 36.2 18 0.00062 21.5 1.7 34 15-48 108-149 (234)
437 1sny_A Sniffer CG10964-PA; alp 36.0 71 0.0024 19.3 4.5 21 6-26 91-112 (267)
438 3go2_A Putative L-alanine-DL-g 36.0 52 0.0018 22.0 4.0 34 4-38 201-234 (409)
439 4hyl_A Stage II sporulation pr 35.9 49 0.0017 17.3 4.5 47 3-49 29-83 (117)
440 2opj_A O-succinylbenzoate-COA 35.9 55 0.0019 21.2 4.0 37 4-41 112-151 (327)
441 1spx_A Short-chain reductase f 35.8 75 0.0026 19.4 5.6 12 15-26 85-96 (278)
442 3dii_A Short-chain dehydrogena 35.8 72 0.0025 19.2 5.1 12 15-26 74-85 (247)
443 3grp_A 3-oxoacyl-(acyl carrier 35.7 77 0.0026 19.4 5.2 12 15-26 100-111 (266)
444 2as0_A Hypothetical protein PH 35.6 33 0.0011 22.6 3.0 36 14-49 287-337 (396)
445 4dyv_A Short-chain dehydrogena 35.5 78 0.0027 19.5 5.5 12 15-26 101-112 (272)
446 3tcs_A Racemase, putative; PSI 35.5 52 0.0018 21.9 3.9 37 4-41 187-226 (388)
447 2ox4_A Putative mandelate race 35.4 54 0.0018 21.7 4.0 38 4-42 197-237 (403)
448 2gl5_A Putative dehydratase pr 35.4 52 0.0018 21.8 4.0 38 4-42 206-246 (410)
449 3fcp_A L-Ala-D/L-Glu epimerase 35.2 58 0.002 21.5 4.1 36 5-41 182-220 (381)
450 3ekg_A Mandelate racemase/muco 35.2 53 0.0018 22.1 3.9 33 5-38 199-231 (404)
451 3tji_A Mandelate racemase/muco 34.9 54 0.0018 22.1 4.0 36 5-41 211-249 (422)
452 2og9_A Mandelate racemase/muco 34.8 62 0.0021 21.4 4.2 37 4-41 195-234 (393)
453 3u81_A Catechol O-methyltransf 34.8 71 0.0024 18.8 4.3 33 15-48 133-171 (221)
454 3fxg_A Rhamnonate dehydratase; 34.8 59 0.002 22.3 4.2 35 5-40 205-239 (455)
455 3lst_A CALO1 methyltransferase 34.6 28 0.00096 22.4 2.5 33 16-48 247-287 (348)
456 3eld_A Methyltransferase; flav 34.5 71 0.0024 20.7 4.3 33 14-46 145-190 (300)
457 3i53_A O-methyltransferase; CO 34.5 33 0.0011 21.8 2.9 33 16-48 235-275 (332)
458 2dkn_A 3-alpha-hydroxysteroid 34.5 73 0.0025 18.9 5.8 12 15-26 61-72 (255)
459 4ina_A Saccharopine dehydrogen 34.5 1E+02 0.0035 20.5 5.7 33 16-48 76-108 (405)
460 3pgx_A Carveol dehydrogenase; 34.4 81 0.0028 19.4 5.0 12 15-26 104-115 (280)
461 3reo_A (ISO)eugenol O-methyltr 34.3 31 0.0011 22.5 2.7 20 29-48 282-301 (368)
462 3v3w_A Starvation sensing prot 34.0 56 0.0019 22.0 3.9 36 5-41 215-253 (424)
463 3ew7_A LMO0794 protein; Q8Y8U8 34.0 70 0.0024 18.5 4.9 34 15-48 60-103 (221)
464 3sbf_A Mandelate racemase / mu 34.0 57 0.002 21.7 4.0 36 5-41 190-228 (401)
465 3toy_A Mandelate racemase/muco 33.9 60 0.002 21.5 4.0 36 5-41 202-240 (383)
466 3vcn_A Mannonate dehydratase; 33.8 56 0.0019 22.0 3.9 37 4-41 215-254 (425)
467 1edz_A 5,10-methylenetetrahydr 33.6 13 0.00043 24.3 0.7 33 16-50 245-278 (320)
468 3ddm_A Putative mandelate race 33.6 65 0.0022 21.4 4.2 37 4-41 187-226 (392)
469 3r0u_A Enzyme of enolase super 33.5 63 0.0022 21.4 4.1 34 5-39 175-211 (379)
470 3r4e_A Mandelate racemase/muco 33.5 59 0.002 21.8 4.0 36 5-41 209-247 (418)
471 3p2e_A 16S rRNA methylase; met 33.5 15 0.00052 22.2 1.0 17 29-45 121-137 (225)
472 3mq2_A 16S rRNA methyltransfer 33.5 18 0.0006 21.3 1.3 19 28-46 121-139 (218)
473 4e4f_A Mannonate dehydratase; 33.4 59 0.002 21.9 4.0 37 4-41 216-255 (426)
474 2h78_A Hibadh, 3-hydroxyisobut 33.4 69 0.0024 20.0 4.2 32 16-47 59-97 (302)
475 3mkc_A Racemase; metabolic pro 33.4 59 0.002 21.6 3.9 34 4-38 193-227 (394)
476 2poz_A Putative dehydratase; o 33.3 61 0.0021 21.3 4.0 38 4-42 187-227 (392)
477 3sx2_A Putative 3-ketoacyl-(ac 33.3 84 0.0029 19.2 5.4 12 15-26 101-112 (278)
478 3mqt_A Mandelate racemase/muco 33.0 60 0.002 21.5 3.9 34 4-38 188-222 (394)
479 2ift_A Putative methylase HI07 33.0 19 0.00063 21.2 1.4 35 15-49 123-165 (201)
480 1jsx_A Glucose-inhibited divis 32.9 14 0.0005 21.4 0.9 33 15-47 131-165 (207)
481 3gvc_A Oxidoreductase, probabl 32.9 88 0.003 19.3 5.1 12 15-26 102-113 (277)
482 3dxv_A Alpha-amino-epsilon-cap 32.9 1E+02 0.0035 20.1 5.4 43 4-46 90-136 (439)
483 4dwd_A Mandelate racemase/muco 32.8 69 0.0024 21.3 4.2 36 5-41 180-218 (393)
484 3uuw_A Putative oxidoreductase 32.8 92 0.0031 19.5 5.0 30 16-46 66-95 (308)
485 3jva_A Dipeptide epimerase; en 32.8 65 0.0022 21.0 4.0 37 4-41 171-210 (354)
486 2qq6_A Mandelate racemase/muco 32.7 61 0.0021 21.5 3.9 37 4-41 198-237 (410)
487 3q45_A Mandelate racemase/muco 32.6 64 0.0022 21.2 4.0 37 4-41 172-211 (368)
488 2gs9_A Hypothetical protein TT 32.6 23 0.00077 20.6 1.7 34 15-48 94-133 (211)
489 3cyj_A Mandelate racemase/muco 32.6 65 0.0022 21.1 4.0 33 4-37 176-208 (372)
490 4h83_A Mandelate racemase/muco 32.4 64 0.0022 21.3 4.0 34 5-39 198-231 (388)
491 3dod_A Adenosylmethionine-8-am 32.4 1.1E+02 0.0037 20.2 5.3 36 4-39 91-126 (448)
492 2qgy_A Enolase from the enviro 32.3 71 0.0024 21.1 4.2 38 4-42 182-222 (391)
493 3ipw_A Hydrolase TATD family p 32.2 1E+02 0.0035 20.0 4.8 43 8-50 57-105 (325)
494 2p8j_A S-adenosylmethionine-de 32.1 23 0.0008 20.5 1.7 34 15-48 88-129 (209)
495 3dp7_A SAM-dependent methyltra 32.1 35 0.0012 22.1 2.7 34 15-48 247-288 (363)
496 3rcy_A Mandelate racemase/muco 32.0 53 0.0018 22.2 3.6 37 4-41 191-230 (433)
497 4e4u_A Mandalate racemase/muco 31.9 54 0.0018 22.0 3.6 36 5-41 190-228 (412)
498 2ozt_A TLR1174 protein; struct 31.9 70 0.0024 20.6 4.1 31 5-36 150-180 (332)
499 3l07_A Bifunctional protein fo 31.9 16 0.00055 23.5 1.0 33 16-50 204-236 (285)
500 4da9_A Short-chain dehydrogena 31.7 93 0.0032 19.2 5.7 20 6-26 98-117 (280)
No 1
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=99.79 E-value=1.1e-18 Score=115.10 Aligned_cols=103 Identities=35% Similarity=0.706 Sum_probs=92.8
Q ss_pred hhHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeeccCCCHHHH
Q 040104 2 IAEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLC 80 (105)
Q Consensus 2 ~~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 80 (105)
.+++.+++++.+ +.|+|++|||+|++..+..++++++++|+++.+|.......++...+.++++++.|++.+.++++++
T Consensus 237 ~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 316 (363)
T 3m6i_A 237 AEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRA 316 (363)
T ss_dssp HHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHH
T ss_pred hHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHH
Confidence 367788999999 5699999999999877999999999999999999876666677778899999999998778899999
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|+++++++|+++|||+++
T Consensus 317 ~~l~~~g~i~~~~~i~~~~~l~~~ 340 (363)
T 3m6i_A 317 IRLVENGLVDLTRLVTHRFPLEDA 340 (363)
T ss_dssp HHHHHTTSSCCGGGEEEEEEGGGH
T ss_pred HHHHHhCCCChHHceeeeeeHHHH
Confidence 999999999999999999999985
No 2
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=99.76 E-value=6.6e-18 Score=111.21 Aligned_cols=102 Identities=43% Similarity=0.807 Sum_probs=89.7
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeeccCCCHHHHHH
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLE 82 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 82 (105)
+++.+++++.+++++|++||++|++..+..++++++++|+++.+|....+..+++..++++++++.|++.++.+++++++
T Consensus 229 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 308 (356)
T 1pl8_A 229 QEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAIS 308 (356)
T ss_dssp HHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHH
T ss_pred chHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHH
Confidence 56677888888778999999999987799999999999999999976555667777788999999998877788999999
Q ss_pred HHHcCCCCCCCceeeeeeCCCC
Q 040104 83 FLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 83 ~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++|+++++++|+++|||+++
T Consensus 309 l~~~g~i~~~~~i~~~~~l~~~ 330 (356)
T 1pl8_A 309 MLASKSVNVKPLVTHRFPLEKA 330 (356)
T ss_dssp HHHTTSCCCGGGEEEEEEGGGH
T ss_pred HHHcCCCChHHheEEEecHHHH
Confidence 9999999888999999999985
No 3
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=99.75 E-value=3e-18 Score=113.42 Aligned_cols=102 Identities=24% Similarity=0.448 Sum_probs=89.4
Q ss_pred hHHHHHHHH---HcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC--CccccchhhhhcCeEEEEeeccCCCH
Q 040104 3 AEEVEKIDK---AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAAREVDVVGVFRYKNTW 77 (105)
Q Consensus 3 ~~~~~~~~~---~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~ 77 (105)
+++.+.+++ .+++|+|++|||+|++..+..++++++++|+++.+|.... +.+++...++.+++++.|++.+..++
T Consensus 237 ~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 316 (370)
T 4ej6_A 237 GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVH 316 (370)
T ss_dssp SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCH
T ss_pred cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHH
Confidence 356677777 6756999999999988779999999999999999997654 45677778899999999998887789
Q ss_pred HHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 78 PLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 78 ~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++++++|+++++++|+++|||+++
T Consensus 317 ~~~~~l~~~g~i~~~~~i~~~~~l~~~ 343 (370)
T 4ej6_A 317 RRAADLVATGAIEIDRMISRRISLDEA 343 (370)
T ss_dssp HHHHHHHHTTCSCCGGGEEEEECGGGH
T ss_pred HHHHHHHHcCCCChhHcEEEEEEHHHH
Confidence 999999999999999999999999985
No 4
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=99.71 E-value=1.6e-17 Score=108.87 Aligned_cols=102 Identities=24% Similarity=0.472 Sum_probs=87.9
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccc-hhhhhcCeEEEEeecc--CCCHHH
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL-TPAAAREVDVVGVFRY--KNTWPL 79 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~ 79 (105)
+++.+.+++.+++++|++||++|++..+..++++++++|+++.+|.+..+..+++ ..++.+++++.|++.+ +.++++
T Consensus 218 ~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 297 (343)
T 2dq4_A 218 EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQ 297 (343)
T ss_dssp SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHH
T ss_pred cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHH
Confidence 3566778877766899999999997779999999999999999998665566777 6778899999998765 678999
Q ss_pred HHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 80 CLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 80 ~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++++|+++++++|+++|||+|+
T Consensus 298 ~~~l~~~g~~~~~~~i~~~~~l~~~ 322 (343)
T 2dq4_A 298 GTALVYSGRVDLSPLLTHRLPLSRY 322 (343)
T ss_dssp HHHHHHHTSSCCGGGEEEEEEGGGH
T ss_pred HHHHHHcCCCChHHheeEEecHHHH
Confidence 9999999998889999999999985
No 5
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=99.71 E-value=4.4e-17 Score=107.09 Aligned_cols=101 Identities=43% Similarity=0.733 Sum_probs=87.2
Q ss_pred HHHHHHHHHcC----CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeeccCCCHHH
Q 040104 4 EEVEKIDKAMG----TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPL 79 (105)
Q Consensus 4 ~~~~~~~~~~~----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 79 (105)
++.+++++.++ +++|++||++|.+..+..++++++++|+++.+|....+..++...+.++++++.|++.++.++++
T Consensus 224 ~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 303 (352)
T 1e3j_A 224 EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPI 303 (352)
T ss_dssp SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHH
T ss_pred cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHH
Confidence 45566777664 68999999999987799999999999999999976555567777788999999998877788999
Q ss_pred HHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 80 CLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 80 ~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++++|+++++++|+++|||+++
T Consensus 304 ~~~l~~~g~i~~~~~i~~~~~l~~~ 328 (352)
T 1e3j_A 304 ALEMVASGRCNVKQLVTHSFKLEQT 328 (352)
T ss_dssp HHHHHHTTSCCCGGGEEEEEEGGGH
T ss_pred HHHHHHcCCCChHHheeEEecHHHH
Confidence 9999999999888999999999985
No 6
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=99.70 E-value=6.3e-17 Score=108.11 Aligned_cols=101 Identities=15% Similarity=0.269 Sum_probs=88.4
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCCh-HHHHHHHHhh----hcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc--C
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFN-KTMSTALSAT----RAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY--K 74 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~ 74 (105)
+++.+++++.+ +.|+|++|||+|++ ..+..+++++ +++|+++.+|....+..++...+..+++++.|++.. .
T Consensus 268 ~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 347 (404)
T 3ip1_A 268 ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGH 347 (404)
T ss_dssp SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCST
T ss_pred CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCch
Confidence 45778899999 45999999999998 3477888888 999999999987766778888889999999999865 6
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 75 NTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 75 ~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.+++++++++++| +++.++|+++|||+++
T Consensus 348 ~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~ 376 (404)
T 3ip1_A 348 GTFPRVISLMASG-MDMTKIISKTVSMEEI 376 (404)
T ss_dssp THHHHHHHHHHTT-CCGGGGCCEEECGGGH
T ss_pred HHHHHHHHHHHcC-CChhheEEEEeeHHHH
Confidence 7899999999999 9888899999999985
No 7
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=99.70 E-value=2.4e-17 Score=107.90 Aligned_cols=101 Identities=19% Similarity=0.318 Sum_probs=84.7
Q ss_pred HHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCcc---ccchhhhhcCeEEEEeecc------
Q 040104 4 EEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT---VPLTPAAAREVDVVGVFRY------ 73 (105)
Q Consensus 4 ~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~i~~~~~~------ 73 (105)
+..+.+++.+ ++++|+++|++|.+.+++.++++++++|+++.+|....+.. +++..++.+++++.|++..
T Consensus 216 ~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~ 295 (346)
T 4a2c_A 216 SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWP 295 (346)
T ss_dssp CHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTT
T ss_pred CHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcch
Confidence 4456667777 57999999999999889999999999999999998765433 3445678899999998753
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 74 KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 74 ~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.++++++++++++|+++++++|+++|||+|+
T Consensus 296 ~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~ 326 (346)
T 4a2c_A 296 GQEWETASRLLTERKLSLEPLIAHRGSFESF 326 (346)
T ss_dssp CHHHHHHHHHHHTTCSCCGGGEEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCccEeEEEeHHHH
Confidence 3578999999999999999999999999875
No 8
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=99.69 E-value=5.9e-17 Score=106.35 Aligned_cols=102 Identities=24% Similarity=0.499 Sum_probs=87.5
Q ss_pred hHHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccc-hhhhhcCeEEEEeecc--CCCHH
Q 040104 3 AEEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL-TPAAAREVDVVGVFRY--KNTWP 78 (105)
Q Consensus 3 ~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~ 78 (105)
+++.+++++.++ .++|++||++|.+..+..++++++++|+++.+|....+..++. ..++.+++++.|++.. +++++
T Consensus 222 ~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 301 (348)
T 2d8a_A 222 EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWY 301 (348)
T ss_dssp SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHH
T ss_pred cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHH
Confidence 356678888884 5899999999997779999999999999999998665566776 6778899999998654 56799
Q ss_pred HHHHHHHcCCCCCCCceeeeee-CCCC
Q 040104 79 LCLEFLRSGKIDIKPLVTHRFG-FSQK 104 (105)
Q Consensus 79 ~~~~~v~~g~i~~~~~i~~~~~-l~~~ 104 (105)
++++++++|+++++++|+++|| |+|+
T Consensus 302 ~~~~l~~~g~i~~~~~i~~~~~gl~~~ 328 (348)
T 2d8a_A 302 TVSRLLQSGKLNLDPIITHKYKGFDKY 328 (348)
T ss_dssp HHHHHHHHTCCCCTTTEEEEEESSTTH
T ss_pred HHHHHHHcCCCChHHhheeeCCCHHHH
Confidence 9999999999988999999999 9985
No 9
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=99.68 E-value=3.7e-17 Score=107.42 Aligned_cols=102 Identities=21% Similarity=0.251 Sum_probs=84.6
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchh----hhhcCeEEEEeecc--CC
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP----AAAREVDVVGVFRY--KN 75 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~~~~~~--~~ 75 (105)
+++.+++++.+ +.|+|++||++|++..+..++++++++|+++.+|.......+++.. ..++++++.+++.. +.
T Consensus 221 ~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 300 (352)
T 3fpc_A 221 GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRL 300 (352)
T ss_dssp SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHH
T ss_pred cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchh
Confidence 45778889999 4589999999999777999999999999999999765443343332 23588999998764 56
Q ss_pred CHHHHHHHHHcCCCCCCCceeeeee-CCCC
Q 040104 76 TWPLCLEFLRSGKIDIKPLVTHRFG-FSQK 104 (105)
Q Consensus 76 ~~~~~~~~v~~g~i~~~~~i~~~~~-l~~~ 104 (105)
+++++++++++|+++++++|+++|| |+|+
T Consensus 301 ~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~ 330 (352)
T 3fpc_A 301 RMERLIDLVFYKRVDPSKLVTHVFRGFDNI 330 (352)
T ss_dssp HHHHHHHHHHTTSCCGGGGEEEEEESTTHH
T ss_pred HHHHHHHHHHcCCCChhHhheeeCCCHHHH
Confidence 7999999999999998889999999 9975
No 10
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=99.67 E-value=8.7e-17 Score=106.49 Aligned_cols=100 Identities=29% Similarity=0.438 Sum_probs=84.5
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC-CEEEEEcCCCCCccccchhhhhcCeEEEEeecc----CCCHH
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY----KNTWP 78 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~ 78 (105)
++.+++++.+++++|++||++|++..+..++++++++ |+++.+|.+..+..++...+..++ ++.|++.. .++++
T Consensus 253 ~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~ 331 (376)
T 1e3i_A 253 PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SINGTFFGGWKSVDSVP 331 (376)
T ss_dssp CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEEECSGGGCCHHHHHH
T ss_pred hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEEEEecCCCCcHHHHH
Confidence 4677888888669999999999977799999999999 999999985444556666677788 99998653 45789
Q ss_pred HHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 79 LCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 79 ~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++++|+++++++|+++|||+|+
T Consensus 332 ~~~~l~~~g~i~~~~~i~~~~~l~~~ 357 (376)
T 1e3i_A 332 NLVSDYKNKKFDLDLLVTHALPFESI 357 (376)
T ss_dssp HHHHHHHTTSSCGGGGEEEEEEGGGH
T ss_pred HHHHHHHcCCCCcHHhEeeeecHHHH
Confidence 99999999999888899999999985
No 11
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=99.67 E-value=1.7e-16 Score=105.18 Aligned_cols=101 Identities=21% Similarity=0.267 Sum_probs=83.7
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC-CEEEEEcCCCCCc--cccchhhhhcCeEEEEeecc----CC
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEM--TVPLTPAAAREVDVVGVFRY----KN 75 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~----~~ 75 (105)
+++.+.+++.+++++|++|||+|++..+..++++++++ |+++.+|...... .++...+. +++++.|++.. +.
T Consensus 250 ~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~ 328 (378)
T 3uko_A 250 KPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRT 328 (378)
T ss_dssp SCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH-TTCEEEECSGGGCCHHH
T ss_pred hhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh-cCcEEEEEEecCCCchH
Confidence 45778899999669999999999987799999999996 9999999765333 34444444 48999998754 46
Q ss_pred CHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 76 TWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 76 ~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++++++++|+++++++|+++|||+++
T Consensus 329 ~~~~~~~l~~~g~l~~~~~i~~~~~l~~~ 357 (378)
T 3uko_A 329 QVPWLVEKYMNKEIKVDEYITHNLTLGEI 357 (378)
T ss_dssp HHHHHHHHHHTTSSCCGGGEEEEEEGGGH
T ss_pred HHHHHHHHHHcCCCChhHheeeEeeHHHH
Confidence 79999999999999988999999999985
No 12
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=99.67 E-value=3e-16 Score=103.82 Aligned_cols=100 Identities=21% Similarity=0.270 Sum_probs=83.9
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC-CEEEEEcCCCC--CccccchhhhhcCeEEEEeecc---CCCH
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAAREVDVVGVFRY---KNTW 77 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~---~~~~ 77 (105)
++.+.+++.+++++|++|||+|.+..+..++++++++ |+++.+|.... ...++...+..++ ++.|++.. .+++
T Consensus 249 ~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~ 327 (373)
T 1p0f_A 249 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGGFKGEEV 327 (373)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGGCCGGGH
T ss_pred hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCCcCHHHH
Confidence 4778888888669999999999977799999999999 99999997653 3445555666777 99998653 3689
Q ss_pred HHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 78 PLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 78 ~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++++++|+++++++|+++|||+|+
T Consensus 328 ~~~~~l~~~g~i~~~~~i~~~~~l~~~ 354 (373)
T 1p0f_A 328 SRLVDDYMKKKINVNFLVSTKLTLDQI 354 (373)
T ss_dssp HHHHHHHHTTSSCGGGGEEEEECGGGH
T ss_pred HHHHHHHHcCCCCchheEEEEeeHHHH
Confidence 999999999999888899999999985
No 13
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=99.66 E-value=9.6e-17 Score=105.14 Aligned_cols=99 Identities=23% Similarity=0.367 Sum_probs=87.8
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHH
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
+++.+++++.+ +.|+|.++|++|++.++..++.+++++|+++.+|.+.....++...++++++++.|++.+ +.+++++
T Consensus 218 ~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~ 297 (348)
T 4eez_A 218 VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEA 297 (348)
T ss_dssp CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHH
T ss_pred CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHH
Confidence 46778899999 569999999999999899999999999999999987777778888889999999999887 7889999
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|++ ++++ ++|||+|+
T Consensus 298 ~~l~~~g~i--~p~~-~~~~l~~~ 318 (348)
T 4eez_A 298 FQFGAEGKV--KPIV-ATRKLEEI 318 (348)
T ss_dssp HHHHHTTSC--CCCE-EEECGGGH
T ss_pred HHHHHcCCC--EEEE-EEEeHHHH
Confidence 999999999 4555 68999985
No 14
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=99.65 E-value=6e-17 Score=107.48 Aligned_cols=101 Identities=14% Similarity=0.261 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-C-Cccccchh-hhhcCeEEEEeecc-CCC
Q 040104 2 IAEEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-H-EMTVPLTP-AAAREVDVVGVFRY-KNT 76 (105)
Q Consensus 2 ~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~~i~~~~~~-~~~ 76 (105)
.+++.+++++.++ .++|++||++|++..+..++++++++|+++.+|... . +..+++.. ++.+++++.|++.. +.+
T Consensus 252 ~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 331 (380)
T 1vj0_A 252 VEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSH 331 (380)
T ss_dssp HHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHHH
T ss_pred cchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCCHHH
Confidence 3567788888884 589999999998766999999999999999999765 4 55677767 78899999998876 678
Q ss_pred HHHHHHHHHc--CCCCCCCceeeeeeCCCC
Q 040104 77 WPLCLEFLRS--GKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 77 ~~~~~~~v~~--g~i~~~~~i~~~~~l~~~ 104 (105)
++++++++++ |++ +++++++|||+|+
T Consensus 332 ~~~~~~l~~~~~g~l--~~~i~~~~~l~~~ 359 (380)
T 1vj0_A 332 FVKTVSITSRNYQLL--SKLITHRLPLKEA 359 (380)
T ss_dssp HHHHHHHHHTCHHHH--GGGCCEEEEGGGH
T ss_pred HHHHHHHHHhhcCCe--eeEEEEEEeHHHH
Confidence 9999999999 998 7889999999985
No 15
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=99.65 E-value=1.7e-16 Score=104.95 Aligned_cols=101 Identities=18% Similarity=0.326 Sum_probs=85.1
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC--CccccchhhhhcCeEEEEeecc----CCC
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAAREVDVVGVFRY----KNT 76 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~ 76 (105)
+++.+++++.+++++|++||++|.+..+..++++++++|+++.+|.... +..++...+..+++++.|++.. +++
T Consensus 245 ~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 324 (371)
T 1f8f_A 245 QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKF 324 (371)
T ss_dssp SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHH
T ss_pred cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCchHHH
Confidence 3566788888855999999999997779999999999999999997642 3456766778899999998754 357
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 77 WPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 77 ~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++++++|++++.++|++ |||+|+
T Consensus 325 ~~~~~~l~~~g~l~~~~~i~~-~~l~~~ 351 (371)
T 1f8f_A 325 IPELVRLYQQGKFPFDQLVKF-YAFDEI 351 (371)
T ss_dssp HHHHHHHHHTTSCCGGGGEEE-EEGGGH
T ss_pred HHHHHHHHHcCCCCcccceeE-ecHHHH
Confidence 899999999999988888998 999985
No 16
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=99.65 E-value=1.4e-16 Score=105.10 Aligned_cols=99 Identities=20% Similarity=0.333 Sum_probs=86.2
Q ss_pred hHHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-CCCHHH
Q 040104 3 AEEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY-KNTWPL 79 (105)
Q Consensus 3 ~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~ 79 (105)
+++.+++++.++ .++|++|||+|... +..++++++++|+++.+|.... ...++...+..+++++.|+..+ +.++++
T Consensus 243 ~~~~~~v~~~~~g~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 321 (363)
T 3uog_A 243 EDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALED 321 (363)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEETTSSC-HHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHH
T ss_pred ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHH
Confidence 457788888884 59999999999765 9999999999999999997654 3567777888999999999877 788999
Q ss_pred HHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 80 CLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 80 ~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++++|++ +++++++|||+++
T Consensus 322 ~~~l~~~g~l--~~~i~~~~~l~~~ 344 (363)
T 3uog_A 322 LVGAVDRLGL--KPVIDMRYKFTEV 344 (363)
T ss_dssp HHHHHHHHTC--CCCEEEEEEGGGH
T ss_pred HHHHHHcCCC--ccceeeEEcHHHH
Confidence 9999999988 7789999999985
No 17
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=99.65 E-value=5.2e-16 Score=102.70 Aligned_cols=100 Identities=24% Similarity=0.322 Sum_probs=83.8
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC-CEEEEEcCCCC--CccccchhhhhcCeEEEEeecc----CCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAAREVDVVGVFRY----KNT 76 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~ 76 (105)
++.+.+++.+++++|++||++|.+..+..++++++++ |+++.+|.... ...++...++.++ ++.|++.. .++
T Consensus 249 ~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~ 327 (374)
T 2jhf_A 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGGFKSKDS 327 (374)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHH
T ss_pred hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCCCChHHH
Confidence 4677888888669999999999977799999999999 99999997653 3456666667788 99998653 457
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 77 WPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 77 ~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++++++|+++++++|+++|||+|+
T Consensus 328 ~~~~~~l~~~g~i~~~~~i~~~~~l~~~ 355 (374)
T 2jhf_A 328 VPKLVADFMAKKFALDPLITHVLPFEKI 355 (374)
T ss_dssp HHHHHHHHHTTSSCCGGGEEEEEEGGGH
T ss_pred HHHHHHHHHcCCCCchhheEEEEeHHHH
Confidence 9999999999999888899999999985
No 18
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=99.64 E-value=4.3e-16 Score=103.09 Aligned_cols=100 Identities=22% Similarity=0.311 Sum_probs=83.9
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC-CEEEEEcCCCC-CccccchhhhhcCeEEEEeecc----CCCH
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY----KNTW 77 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~----~~~~ 77 (105)
++.+.+++.+++++|++||++|.+..+..++++++++ |+++.+|.... +..++...+..++ ++.|++.. ++++
T Consensus 250 ~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~ 328 (374)
T 1cdo_A 250 PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMFGGFKGKDGV 328 (374)
T ss_dssp CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSGGGCCHHHHH
T ss_pred hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEecCCCCcHHHH
Confidence 4677888888669999999999977799999999999 99999997653 4455656667777 99998653 4579
Q ss_pred HHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 78 PLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 78 ~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++++++|+++++++|+++|||+|+
T Consensus 329 ~~~~~l~~~g~l~~~~~i~~~~~l~~~ 355 (374)
T 1cdo_A 329 PKMVKAYLDKKVKLDEFITHRMPLESV 355 (374)
T ss_dssp HHHHHHHHTTSSCCGGGEEEEEEGGGH
T ss_pred HHHHHHHHcCCCChHHheeeEecHHHH
Confidence 999999999999888899999999985
No 19
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=99.64 E-value=4.9e-16 Score=102.73 Aligned_cols=100 Identities=26% Similarity=0.332 Sum_probs=83.7
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC-CEEEEEcCCCC--CccccchhhhhcCeEEEEeecc----CCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAAREVDVVGVFRY----KNT 76 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~ 76 (105)
++.+.+++.+++++|++||++|++..+..++++++++ |+++.+|.... ...++...+..++ ++.|+... +.+
T Consensus 248 ~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~ 326 (373)
T 2fzw_A 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGGWKSVES 326 (373)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHH
T ss_pred cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCCCCcHHH
Confidence 4677888888669999999999977799999999999 99999997653 3455656667777 99988653 457
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 77 WPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 77 ~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++++++|+++++++|+++|||+++
T Consensus 327 ~~~~~~l~~~g~l~~~~~i~~~~~l~~~ 354 (373)
T 2fzw_A 327 VPKLVSEYMSKKIKVDEFVTHNLSFDEI 354 (373)
T ss_dssp HHHHHHHHHTTSSCSGGGEEEEEEGGGH
T ss_pred HHHHHHHHHcCCCCchheEeEEeeHHHH
Confidence 9999999999999888899999999985
No 20
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=99.63 E-value=3.3e-16 Score=102.65 Aligned_cols=97 Identities=22% Similarity=0.335 Sum_probs=83.3
Q ss_pred HHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-CCCHHHH
Q 040104 4 EEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 4 ~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
++.+++++.++ .++|++|||+|++..++.++++++++|+++.+|.... ...+++ .++.+++++.+++.+ .++++++
T Consensus 226 ~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~ 304 (345)
T 3jv7_A 226 GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEV 304 (345)
T ss_dssp THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHH
T ss_pred cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHH
Confidence 56788888884 5999999999998779999999999999999998665 556664 677899999999877 7889999
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|++++ ++++|||+++
T Consensus 305 ~~l~~~g~l~~---~~~~~~l~~~ 325 (345)
T 3jv7_A 305 VALARAGRLDI---HTETFTLDEG 325 (345)
T ss_dssp HHHHHTTCCCC---CEEEECSTTH
T ss_pred HHHHHcCCCce---EEEEEcHHHH
Confidence 99999999954 4579999985
No 21
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=99.61 E-value=1.8e-15 Score=99.12 Aligned_cols=94 Identities=22% Similarity=0.293 Sum_probs=76.7
Q ss_pred HHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHHHHHHHc
Q 040104 9 IDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLCLEFLRS 86 (105)
Q Consensus 9 ~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~~ 86 (105)
+.+.+ +.++|++||++|.+..+..++++++++|+++.+|.+..+..++...++.+++++.|++.+ +++++++++++++
T Consensus 230 ~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~ 309 (344)
T 2h6e_A 230 INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSES 309 (344)
T ss_dssp HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHc
Confidence 34455 458999999999986699999999999999999987655567777778899999998776 6789999999999
Q ss_pred CCCCCCCceeeeeeCCCCC
Q 040104 87 GKIDIKPLVTHRFGFSQKE 105 (105)
Q Consensus 87 g~i~~~~~i~~~~~l~~~~ 105 (105)
|++ ++.+ ++|||+|++
T Consensus 310 g~i--~~~i-~~~~l~~~~ 325 (344)
T 2h6e_A 310 GKI--KPYI-IKVPLDDIN 325 (344)
T ss_dssp TSS--CCCE-EEECC----
T ss_pred CCC--Ccce-EEEeHHHHH
Confidence 999 5567 899999864
No 22
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=99.61 E-value=1.6e-16 Score=104.64 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=80.8
Q ss_pred HHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-CCccccchhh----hhcCeEEEEeecc-CCCHHHHHH
Q 040104 9 IDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPA----AAREVDVVGVFRY-KNTWPLCLE 82 (105)
Q Consensus 9 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i~~~~~~-~~~~~~~~~ 82 (105)
+++. ++++|++||++|++..+..++++++++|+++.+|... .+..++...+ +.+++++.|++.+ +++++++++
T Consensus 236 i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 314 (357)
T 2b5w_A 236 VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATV 314 (357)
T ss_dssp HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHHHHHHHH
T ss_pred HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHHHHHHHH
Confidence 5555 4589999999999866999999999999999999866 4556676667 7899999998776 678999999
Q ss_pred HHHcC--CCCCCCceeeeeeCCCCC
Q 040104 83 FLRSG--KIDIKPLVTHRFGFSQKE 105 (105)
Q Consensus 83 ~v~~g--~i~~~~~i~~~~~l~~~~ 105 (105)
++++| ++ ++++++++|||++++
T Consensus 315 l~~~g~~~~-~~~~i~~~~~l~~~~ 338 (357)
T 2b5w_A 315 TFTKLPKWF-LEDLVTGVHPLSEFE 338 (357)
T ss_dssp HHHHSCHHH-HHHHEEEEEEGGGGG
T ss_pred HHHhCchhh-hhhhcceeecHHHHH
Confidence 99999 85 488899999999863
No 23
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=99.60 E-value=3.8e-16 Score=104.17 Aligned_cols=99 Identities=16% Similarity=0.274 Sum_probs=82.0
Q ss_pred HHHHHHHcC-CCCcEEEEccCChH--------------HHHHHHHhhhcCCEEEEEcCCC-------------CCccccc
Q 040104 6 VEKIDKAMG-TGIDVSFDCAGFNK--------------TMSTALSATRAGGKVCLVGMGH-------------HEMTVPL 57 (105)
Q Consensus 6 ~~~~~~~~~-~g~d~vid~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~-------------~~~~~~~ 57 (105)
.+++++.++ .++|++||++|+.. ++..++++++++|+++.+|... .+..+++
T Consensus 243 ~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~ 322 (398)
T 2dph_A 243 RDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDF 322 (398)
T ss_dssp HHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEH
T ss_pred HHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccCCcccccH
Confidence 677888885 48999999999762 5899999999999999999752 2234555
Q ss_pred hhhhhcCeEEEEeecc-CCCHHHHHHHHHcCCCC--CCCceeeeeeCCCC
Q 040104 58 TPAAAREVDVVGVFRY-KNTWPLCLEFLRSGKID--IKPLVTHRFGFSQK 104 (105)
Q Consensus 58 ~~~~~~~~~i~~~~~~-~~~~~~~~~~v~~g~i~--~~~~i~~~~~l~~~ 104 (105)
..++.+++++.++... ...++++++++++|+++ +.++|+++|||+++
T Consensus 323 ~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~ 372 (398)
T 2dph_A 323 GKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQA 372 (398)
T ss_dssp HHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTH
T ss_pred HHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHH
Confidence 5678899999987766 77899999999999997 66689999999985
No 24
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=99.60 E-value=2.2e-15 Score=101.77 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=83.0
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-CCCHHHHHH
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY-KNTWPLCLE 82 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 82 (105)
+.+.+++.+++++|++||++|++. +..++.+++++|+++.+|...+ ...++...++.+++++.|++.+ ..++.++++
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 373 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNR 373 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSCHHH-HHHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEECCCchH-HHHHHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHH
Confidence 367788888779999999999965 9999999999999999997654 3456666778899999998877 567889999
Q ss_pred HHHcCCCCCCCceeeeeeCCCC
Q 040104 83 FLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 83 ~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++|++ +++++++|||+|+
T Consensus 374 l~~~g~l--~~~i~~~~~l~~~ 393 (447)
T 4a0s_A 374 LFESGAV--VPAMSAVYPLAEA 393 (447)
T ss_dssp HHHTTSS--CCCEEEEEEGGGH
T ss_pred HHHcCCc--ccceeEEEcHHHH
Confidence 9999999 6789999999985
No 25
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=99.60 E-value=1.1e-15 Score=103.50 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=83.1
Q ss_pred HHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-CCCHHHH
Q 040104 4 EEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 4 ~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
++.+.+++.++ .++|++|||+|+. .+..++.+++++|+++.+|...+ ...++...+.++++++.|++.. ..++.++
T Consensus 301 ~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 379 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVFEHPGRE-TFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEA 379 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHH
Confidence 34588888884 6999999999995 59999999999999999997654 3456667788899999999877 5677889
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|++ +++|+++|||+++
T Consensus 380 ~~l~~~g~l--~~~i~~~~~l~~~ 401 (456)
T 3krt_A 380 NRLIAKGRI--HPTLSKVYSLEDT 401 (456)
T ss_dssp HHHHHTTSS--CCCEEEEEEGGGH
T ss_pred HHHHHcCCc--ccceeEEEcHHHH
Confidence 999999999 6789999999985
No 26
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=99.59 E-value=6.1e-16 Score=101.49 Aligned_cols=98 Identities=20% Similarity=0.313 Sum_probs=83.6
Q ss_pred HHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-CCccccchhhhhcCeEEEEeecc-CCCHHHH
Q 040104 4 EEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 4 ~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
+..+++.+.++ +++|++||++|++..+..++++++++|+++.+|.+. .+ .+++..++.+++++.|++.+ +++++++
T Consensus 227 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 305 (347)
T 1jvb_A 227 DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGI 305 (347)
T ss_dssp CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHH
T ss_pred cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHH
Confidence 34566777775 589999999999866999999999999999999865 44 67777778899999998776 6789999
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|++ +++|+++|||+++
T Consensus 306 ~~l~~~g~l--~~~i~~~~~l~~~ 327 (347)
T 1jvb_A 306 MRLAEAGKV--KPMITKTMKLEEA 327 (347)
T ss_dssp HHHHHTTSS--CCCCEEEEEGGGH
T ss_pred HHHHHcCCC--CceEEEEEcHHHH
Confidence 999999998 6789999999985
No 27
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=99.58 E-value=2.8e-15 Score=98.60 Aligned_cols=99 Identities=17% Similarity=0.349 Sum_probs=83.0
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC-cc-ccchhhhhcCeEEEEeecc-CCC---
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MT-VPLTPAAAREVDVVGVFRY-KNT--- 76 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~~~-~~~--- 76 (105)
+++.+.+++.+++++|++|||+|++. +..++++++++|+++.+|..... .. +++..++.+++++.|+... ...
T Consensus 222 ~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 300 (353)
T 4dup_A 222 EDFAAVIKAETGQGVDIILDMIGAAY-FERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEK 300 (353)
T ss_dssp SCHHHHHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHH
T ss_pred hHHHHHHHHHhCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhh
Confidence 35667788878779999999999976 99999999999999999976543 33 7777888999999999876 333
Q ss_pred -------HHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 77 -------WPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 77 -------~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++++++|++ +++++++|||+++
T Consensus 301 ~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~ 333 (353)
T 4dup_A 301 RAIRDDLLSEVWPLLEAGTV--APVIHKVFAFEDV 333 (353)
T ss_dssp HHHHHHHHHHTHHHHHHTSS--CCCEEEEEEGGGH
T ss_pred HHHHHHHHHHHHHHHHCCCc--cCCcceEEeHHHH
Confidence 7889999999998 6789999999985
No 28
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=99.58 E-value=4.5e-15 Score=97.21 Aligned_cols=98 Identities=22% Similarity=0.378 Sum_probs=82.3
Q ss_pred HHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC-ccccchhhhhcCeEEEEeecc-CCCHHHH
Q 040104 4 EEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 4 ~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
++.+++++.+ +.++|++||++|. ..+..++++++++|+++.+|..... ..+++..++.+++++.|+... .++++++
T Consensus 222 ~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 300 (343)
T 2eih_A 222 DWPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPI 300 (343)
T ss_dssp THHHHHHHHTTTTCEEEEEESSCS-SSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHH
T ss_pred cHHHHHHHHhCCCCceEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHH
Confidence 4567778777 4589999999995 4599999999999999999976543 346677778899999998765 7789999
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|++ +++++++|||+++
T Consensus 301 ~~l~~~g~l--~~~i~~~~~l~~~ 322 (343)
T 2eih_A 301 LRFVEEGKL--KPVVGQVLPLEAA 322 (343)
T ss_dssp HHHHHHTSS--CCCEEEEEEGGGH
T ss_pred HHHHHcCCC--CCceeEEeeHHHH
Confidence 999999998 6788999999985
No 29
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=99.56 E-value=6.4e-15 Score=96.57 Aligned_cols=96 Identities=21% Similarity=0.300 Sum_probs=80.0
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc--------
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-------- 73 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 73 (105)
+++.+.+++.+ +.++|++|||+|++. +..++++++++|+++.+|... .++...+..+++++.+++..
T Consensus 202 ~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 277 (343)
T 3gaz_A 202 REPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEG 277 (343)
T ss_dssp SCHHHHHHHHHTTSCEEEEEESSCTHH-HHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCS
T ss_pred CCHHHHHHHHhcCCCceEEEECCCcHH-HHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccc
Confidence 45667788888 469999999999865 999999999999999998654 35666778899999997653
Q ss_pred ----CCCHHHHHHHHHcCCCCCCCcee-eeeeCCCC
Q 040104 74 ----KNTWPLCLEFLRSGKIDIKPLVT-HRFGFSQK 104 (105)
Q Consensus 74 ----~~~~~~~~~~v~~g~i~~~~~i~-~~~~l~~~ 104 (105)
.+.++++++++++|++ +++++ ++|||+++
T Consensus 278 ~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~l~~~ 311 (343)
T 3gaz_A 278 LAHFGEMLREADALVQTGKL--APRLDPRTFSIAEI 311 (343)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--CCCBCSCCEETTCH
T ss_pred hHHHHHHHHHHHHHHHCCCc--ccCccCcEecHHHH
Confidence 2568999999999999 66788 79999985
No 30
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=99.55 E-value=5e-15 Score=96.92 Aligned_cols=97 Identities=18% Similarity=0.341 Sum_probs=81.1
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHHHH
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLCLE 82 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 82 (105)
++.+.+++.+ +++|++||++|.+..+..++++++++|+++.+|...++..++...++.+++++.|++.+ +++++++++
T Consensus 219 ~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 297 (339)
T 1rjw_A 219 DAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQ 297 (339)
T ss_dssp CHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred cHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHH
Confidence 4556777777 58999999999977799999999999999999987655556666778899999998776 678999999
Q ss_pred HHHcCCCCCCCceeeeeeCCCC
Q 040104 83 FLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 83 ~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++|++++ . +++|||+++
T Consensus 298 l~~~g~l~~--~-~~~~~l~~~ 316 (339)
T 1rjw_A 298 FAAEGKVKT--I-IEVQPLEKI 316 (339)
T ss_dssp HHHTTSCCC--C-EEEEEGGGH
T ss_pred HHHcCCCCc--c-EEEEcHHHH
Confidence 999999954 3 468999985
No 31
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=99.55 E-value=1e-15 Score=100.45 Aligned_cols=99 Identities=9% Similarity=0.030 Sum_probs=81.0
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-CCccccc-hhhhhcCeEEEEeecc------
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPL-TPAAAREVDVVGVFRY------ 73 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~-~~~~~~~~~i~~~~~~------ 73 (105)
+++.+.+++.+ ++++|++|||+|++. +..++++++++|+++.+|... .+..++. ..++.+++++.|++.+
T Consensus 219 ~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 297 (349)
T 3pi7_A 219 PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQF 297 (349)
T ss_dssp TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhC
Confidence 45778888888 469999999999987 799999999999999999644 3455776 7788999999998753
Q ss_pred ----CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 74 ----KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 74 ----~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.+.++++++++++|++ +++++++|||+++
T Consensus 298 ~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~ 330 (349)
T 3pi7_A 298 KERRGPAILEAQKRFSDGRW--STDVTAVVPLAEA 330 (349)
T ss_dssp HHHHHHHHHHC-CTTTTSSC--CC-CCEEEEHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCc--ccccceEEcHHHH
Confidence 3567888899999999 6789999999875
No 32
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=99.54 E-value=9.7e-15 Score=95.32 Aligned_cols=99 Identities=17% Similarity=0.258 Sum_probs=80.3
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC-ccccchhhhhcCeEEEEeecc-----C-
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAAREVDVVGVFRY-----K- 74 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----~- 74 (105)
+++.+.+++.+ +.++|++|||+|+.. ++.++++++++|+++.+|...++ ..++...+..+++++.++... +
T Consensus 203 ~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
T 3qwb_A 203 EDILRQVLKFTNGKGVDASFDSVGKDT-FEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPE 281 (334)
T ss_dssp SCHHHHHHHHTTTSCEEEEEECCGGGG-HHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHH
T ss_pred chHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHH
Confidence 45677888888 569999999999865 99999999999999999986543 357777788899999876432 2
Q ss_pred ---CCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 75 ---NTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 75 ---~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+.++++++++++|+++ +.++++|||+++
T Consensus 282 ~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~ 312 (334)
T 3qwb_A 282 EWKYYSDEFFGLVNSKKLN--IKIYKTYPLRDY 312 (334)
T ss_dssp HHHHHHHHHHHHHHTTSSC--CCEEEEEEGGGH
T ss_pred HHHHHHHHHHHHHHCCCcc--CceeeEEcHHHH
Confidence 2347899999999995 458999999985
No 33
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.54 E-value=2.2e-15 Score=98.97 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=71.9
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC-----------------ccccchhhhhcCe
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-----------------MTVPLTPAAAREV 65 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~ 65 (105)
+++.+++++.+++|+|++|||+|++. +..++++++++|+++.+|..... ..++...++.+++
T Consensus 195 ~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 273 (349)
T 4a27_A 195 ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENK 273 (349)
T ss_dssp SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTC
T ss_pred ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCc
Confidence 45677888888889999999999987 69999999999999999974310 1244456678899
Q ss_pred EEEEeecc------------CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 66 DVVGVFRY------------KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 66 ~i~~~~~~------------~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++.|+... +++++++++++++|++ +++++++|||+++
T Consensus 274 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~ 322 (349)
T 4a27_A 274 VIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWALEEV 322 (349)
T ss_dssp EEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECGGGH
T ss_pred eEEEEeehheeccccchHHHHHHHHHHHHHHHCCCc--cccccceECHHHH
Confidence 99988642 3568899999999999 6789999999985
No 34
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=99.54 E-value=4.6e-16 Score=102.73 Aligned_cols=97 Identities=16% Similarity=0.248 Sum_probs=81.4
Q ss_pred HHHHHHcCCCCcEEEEccCChHHH-HHHHHhhhcCCEEEEEcCCCCC-ccccchh---hhhcCeEEEEeecc-CCCHHHH
Q 040104 7 EKIDKAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVGMGHHE-MTVPLTP---AAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 7 ~~~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
+++++ +++++|++||++|.+..+ ..++++++++|+++.+|..... ..++... ++.+++++.|++.+ +.+++++
T Consensus 238 ~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 316 (366)
T 2cdc_A 238 DKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQA 316 (366)
T ss_dssp HHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECCCCCHHHHHHH
T ss_pred HHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEecCCCHHHHHHH
Confidence 45555 546899999999997668 9999999999999999976543 4566666 78899999998776 6789999
Q ss_pred HHHHHcCCCC----CCCceeeeeeCCCC
Q 040104 81 LEFLRSGKID----IKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~----~~~~i~~~~~l~~~ 104 (105)
++++++|+++ ++++|+++|||+++
T Consensus 317 ~~l~~~g~i~~~~~~~~~i~~~~~l~~~ 344 (366)
T 2cdc_A 317 VVHLASWKTLYPKAAKMLITKTVSINDE 344 (366)
T ss_dssp HHHHHHHHHHSHHHHTTSEEEEEETTCH
T ss_pred HHHHHcCCCCcccchhhcEEEEEcHHHH
Confidence 9999999966 58899999999985
No 35
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=99.54 E-value=4.9e-15 Score=96.92 Aligned_cols=98 Identities=18% Similarity=0.307 Sum_probs=82.7
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHHH
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLCL 81 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~ 81 (105)
+++.+.+++..+ ++|++||++|+...++.++++++++|+++.+|.+.++..++...++.+++++.|++.. ++++++++
T Consensus 220 ~~~~~~~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 298 (340)
T 3s2e_A 220 TDPAAWLQKEIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESL 298 (340)
T ss_dssp SCHHHHHHHHHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHH
T ss_pred cCHHHHHHHhCC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHH
Confidence 356677777335 8999999999988899999999999999999987766667777788999999999887 78899999
Q ss_pred HHHHcCCCCCCCceeeeeeCCCC
Q 040104 82 EFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 82 ~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++++|++++ .+ ++|||+++
T Consensus 299 ~l~~~g~l~~--~~-~~~~l~~~ 318 (340)
T 3s2e_A 299 DFAAHGDVKA--TV-STAKLDDV 318 (340)
T ss_dssp HHHHTTSCCC--CE-EEECGGGH
T ss_pred HHHHhCCCCc--eE-EEEeHHHH
Confidence 9999999954 44 57899975
No 36
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=99.52 E-value=6.6e-15 Score=98.11 Aligned_cols=100 Identities=14% Similarity=0.222 Sum_probs=79.8
Q ss_pred HHHHHHHHcC-CCCcEEEEccCCh---------------HHHHHHHHhhhcCCEEEEEcCC-C-C-----------Cccc
Q 040104 5 EVEKIDKAMG-TGIDVSFDCAGFN---------------KTMSTALSATRAGGKVCLVGMG-H-H-----------EMTV 55 (105)
Q Consensus 5 ~~~~~~~~~~-~g~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~-~-~-----------~~~~ 55 (105)
+.+++++.++ .|+|++||++|++ ..+..++++++++|+++.+|.. . . ...+
T Consensus 242 ~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 321 (398)
T 1kol_A 242 LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSI 321 (398)
T ss_dssp HHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCC
T ss_pred HHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccccccccccc
Confidence 6778888884 5899999999986 2589999999999999999975 1 1 1234
Q ss_pred cchhhhhcCeEEEEeecc-CCCHHHHHHHHHcCCCC-CCCceeeeeeCCCC
Q 040104 56 PLTPAAAREVDVVGVFRY-KNTWPLCLEFLRSGKID-IKPLVTHRFGFSQK 104 (105)
Q Consensus 56 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~~g~i~-~~~~i~~~~~l~~~ 104 (105)
++..++.+++++.++... ...++++++++++|+++ +.++++++|||+|+
T Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~ 372 (398)
T 1kol_A 322 RFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDA 372 (398)
T ss_dssp CHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGH
T ss_pred cHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHH
Confidence 555667899999887554 56788999999999996 33678899999985
No 37
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=99.52 E-value=8.9e-15 Score=96.42 Aligned_cols=94 Identities=18% Similarity=0.244 Sum_probs=79.5
Q ss_pred HHHHHHHHcC-CCCcEEEEccCChH--HHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHH
Q 040104 5 EVEKIDKAMG-TGIDVSFDCAGFNK--TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 5 ~~~~~~~~~~-~g~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
+.+.+++.++ .++|++||++|++. .+..++++ ++|+++.+|.+..+ .+++..++.+++++.|++.+ +.+++++
T Consensus 242 ~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 318 (359)
T 1h2b_A 242 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHEL 318 (359)
T ss_dssp HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHH
Confidence 5567788884 48999999999985 68999888 99999999986654 67777778899999998776 6789999
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|++ ++.+ ++|||+|+
T Consensus 319 ~~l~~~g~l--~~~i-~~~~l~~~ 339 (359)
T 1h2b_A 319 VTLALQGKV--RVEV-DIHKLDEI 339 (359)
T ss_dssp HHHHHTTSC--CCCE-EEEEGGGH
T ss_pred HHHHHcCCC--cceE-EEEeHHHH
Confidence 999999998 5567 89999985
No 38
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=99.50 E-value=1.5e-14 Score=94.79 Aligned_cols=98 Identities=20% Similarity=0.304 Sum_probs=74.7
Q ss_pred hHHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC-ccccchhhhhcCeEEEEeecc-------
Q 040104 3 AEEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAAREVDVVGVFRY------- 73 (105)
Q Consensus 3 ~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~------- 73 (105)
+++.+.+++.++ .++|++|||+|++. +..++++++++|+++.+|..... ..++...++.+++++.|+...
T Consensus 213 ~~~~~~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 291 (342)
T 4eye_A 213 EGWAKAVREATGGAGVDMVVDPIGGPA-FDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHA 291 (342)
T ss_dssp TTHHHHHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCT
T ss_pred hhHHHHHHHHhCCCCceEEEECCchhH-HHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCH
Confidence 456778888885 49999999999976 99999999999999999976533 356666778899999998743
Q ss_pred ---CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 74 ---KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 74 ---~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.+.++++++++++| + +++++++|||+++
T Consensus 292 ~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l~~~ 322 (342)
T 4eye_A 292 DYLYETQAGLEKLVAEG-M--RPPVSARIPLSEG 322 (342)
T ss_dssp THHHHHHHHHHHHHHTT-C--CCCEEEEEEGGGH
T ss_pred HHHHHHHHHHHHHHHcC-C--CCCcceEEeHHHH
Confidence 13588999999999 7 7889999999985
No 39
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.5e-14 Score=94.81 Aligned_cols=99 Identities=18% Similarity=0.244 Sum_probs=81.5
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-CCccccchhhhhcCeEEEEeecc-CCCHHHH
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAAREVDVVGVFRY-KNTWPLC 80 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 80 (105)
+++.+.+++.+++++|++||++|.+..+..++++++++|+++.+|... .+..++...++.+++++.|++.. ..+++++
T Consensus 225 ~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 304 (347)
T 2hcy_A 225 KDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREA 304 (347)
T ss_dssp SCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHH
T ss_pred HhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHH
Confidence 456677777774489999999999777999999999999999999765 33456666778899999998776 6789999
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++++|++++ . +++|||+|+
T Consensus 305 ~~l~~~g~l~~--~-~~~~~l~~~ 325 (347)
T 2hcy_A 305 LDFFARGLVKS--P-IKVVGLSTL 325 (347)
T ss_dssp HHHHHTTSCCC--C-EEEEEGGGH
T ss_pred HHHHHhCCCcc--c-eEEEcHHHH
Confidence 99999999954 3 468999985
No 40
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=99.49 E-value=3.2e-14 Score=92.89 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=80.1
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-------CccccchhhhhcCeEEEEeecc--
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-------EMTVPLTPAAAREVDVVGVFRY-- 73 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-- 73 (105)
+++.+.+++.+++++|++|||+|++. +..++++++++|+++.+|.... ...+++..++.+++++.|+..+
T Consensus 205 ~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 283 (336)
T 4b7c_A 205 EDLAAGLKRECPKGIDVFFDNVGGEI-LDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDY 283 (336)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGG
T ss_pred HHHHHHHHHhcCCCceEEEECCCcch-HHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhh
Confidence 45667788888779999999999865 9999999999999999997541 1355666788899999998865
Q ss_pred ----CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 74 ----KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 74 ----~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++.++++++++++|++++ .+..+|||+++
T Consensus 284 ~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~ 316 (336)
T 4b7c_A 284 AQRFPEGLKEMATWLAEGKLQS--REDIVEGLETF 316 (336)
T ss_dssp GGGHHHHHHHHHHHHHTTSSCC--CEEEEECGGGH
T ss_pred hhhhHHHHHHHHHHHHCCCccc--ceeeecCHHHH
Confidence 267889999999999955 45556899875
No 41
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=99.48 E-value=9.3e-14 Score=91.55 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=76.3
Q ss_pred hHHHHHHHHHc---CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-----
Q 040104 3 AEEVEKIDKAM---GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY----- 73 (105)
Q Consensus 3 ~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~----- 73 (105)
+++.+++++.+ ++|+|++|||+|++. ...++++++++|+++.+|.... +..++...+..+++++.|++..
T Consensus 229 ~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 307 (364)
T 1gu7_A 229 REFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKN 307 (364)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTT
T ss_pred HHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhccc
Confidence 35667788887 568999999999988 4589999999999999997542 4456666778899999998653
Q ss_pred -----CCCHHHHHHHHHcCCCCCCCceeeeeeCC
Q 040104 74 -----KNTWPLCLEFLRSGKIDIKPLVTHRFGFS 102 (105)
Q Consensus 74 -----~~~~~~~~~~v~~g~i~~~~~i~~~~~l~ 102 (105)
...++++++++++|++++... .+|+++
T Consensus 308 ~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~~~ 339 (364)
T 1gu7_A 308 NKELKTSTLNQIIAWYEEGKLTDAKS--IETLYD 339 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCCCCCC--EEEECC
T ss_pred CHHHHHHHHHHHHHHHHcCCcccccc--eEEecC
Confidence 246899999999999976544 456664
No 42
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=99.48 E-value=7.7e-14 Score=90.80 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=77.0
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCc-cccchhhhhc-CeEEEEeec----c-C
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAAR-EVDVVGVFR----Y-K 74 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~i~~~~~----~-~ 74 (105)
+++.+.+++.+ +.++|++|||+|+.. +..++++++++|+++.+|...++. .++...+..+ ++++.+... . +
T Consensus 195 ~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (325)
T 3jyn_A 195 EDVAKRVLELTDGKKCPVVYDGVGQDT-WLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNA 273 (325)
T ss_dssp SCHHHHHHHHTTTCCEEEEEESSCGGG-HHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCST
T ss_pred ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCH
Confidence 45678888888 469999999999965 999999999999999999866543 5666666666 667765432 1 3
Q ss_pred CCH----HHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 75 NTW----PLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 75 ~~~----~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.++ +++++++++|++++ .++++|||+++
T Consensus 274 ~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~ 305 (325)
T 3jyn_A 274 QNLQTMADELFDMLASGKLKV--DGIEQYALKDA 305 (325)
T ss_dssp THHHHHHHHHHHHHHTTSSCC--CCCEEEEGGGH
T ss_pred HHHHHHHHHHHHHHHCCCeeC--ccccEEcHHHH
Confidence 444 58999999999955 47899999985
No 43
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=99.47 E-value=6.3e-14 Score=91.72 Aligned_cols=98 Identities=18% Similarity=0.292 Sum_probs=78.1
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC------CccccchhhhhcCeEEEEeecc--CC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH------EMTVPLTPAAAREVDVVGVFRY--KN 75 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~--~~ 75 (105)
++.+.+++.+++++|++||++|+. .+..++++++++|+++.+|.... ...++...++++++++.|++.+ ..
T Consensus 213 ~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 291 (345)
T 2j3h_A 213 DLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYD 291 (345)
T ss_dssp CSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGG
T ss_pred HHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhh
Confidence 445667776666899999999985 59999999999999999997542 2345666778899999998654 22
Q ss_pred ----CHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 76 ----TWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 76 ----~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.++++++++++|++ +++++++|||+++
T Consensus 292 ~~~~~~~~~~~l~~~g~i--~~~~~~~~~l~~~ 322 (345)
T 2j3h_A 292 KYSKFLEFVLPHIREGKI--TYVEDVADGLEKA 322 (345)
T ss_dssp GHHHHHHHHHHHHHTTSS--CCCEEEEESGGGS
T ss_pred hHHHHHHHHHHHHHCCCC--cCcccccCCHHHH
Confidence 38899999999999 5677778999986
No 44
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=99.46 E-value=6.8e-14 Score=92.06 Aligned_cols=100 Identities=14% Similarity=0.244 Sum_probs=77.1
Q ss_pred HHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-Cccccc-hhhhhcCeEEEEeecc-CC-C--
Q 040104 4 EEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPL-TPAAAREVDVVGVFRY-KN-T-- 76 (105)
Q Consensus 4 ~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~i~~~~~~-~~-~-- 76 (105)
++.+++.+.+ +.++|++|||+|++. +..++++++++|+++.+|...+ ...++. ..++.+++++.|+... .. .
T Consensus 218 ~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 296 (354)
T 2j8z_A 218 DFSEATLKFTKGAGVNLILDCIGGSY-WEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYK 296 (354)
T ss_dssp CHHHHHHHHTTTSCEEEEEESSCGGG-HHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHH
T ss_pred HHHHHHHHHhcCCCceEEEECCCchH-HHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEccccccccc
Confidence 4567777777 458999999999985 9999999999999999997553 345666 6778899999998754 22 1
Q ss_pred -------HHHHHHHHHcC-CCCCCCceeeeeeCCCC
Q 040104 77 -------WPLCLEFLRSG-KIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 77 -------~~~~~~~v~~g-~i~~~~~i~~~~~l~~~ 104 (105)
++++++++++| +++++++++++|||+++
T Consensus 297 ~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~ 332 (354)
T 2j8z_A 297 QMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEI 332 (354)
T ss_dssp HHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGH
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHH
Confidence 24578899999 33347889999999985
No 45
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=99.46 E-value=9.5e-14 Score=91.90 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=79.0
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhh-hcCCEEEEEcCCCC------Ccccc---chhhhhcCeEEEEeec
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHH------EMTVP---LTPAAAREVDVVGVFR 72 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~------~~~~~---~~~~~~~~~~i~~~~~ 72 (105)
+++.+.+++.+++++|++|||+|++..++.+++++ +++|+++.+|.... ....+ ...++.+++++.|++.
T Consensus 218 ~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~ 297 (371)
T 3gqv_A 218 PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYG 297 (371)
T ss_dssp TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTC
T ss_pred chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccccccccccc
Confidence 46778899999767999999999987799999999 59999999996432 12222 1245678888887754
Q ss_pred c--C--------CCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 73 Y--K--------NTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 73 ~--~--------~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
. . +.++++++++++|++++.++++++|||+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~ 339 (371)
T 3gqv_A 298 RPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHI 339 (371)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHH
Confidence 3 1 124578899999999998888888999875
No 46
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=99.46 E-value=7.1e-14 Score=91.19 Aligned_cols=98 Identities=15% Similarity=0.262 Sum_probs=78.9
Q ss_pred HHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-Cccccch-hhhhcC--eEEEEeecc-----
Q 040104 4 EEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLT-PAAARE--VDVVGVFRY----- 73 (105)
Q Consensus 4 ~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~~~~~~----- 73 (105)
+..+++.+.+ +.++|++|||+|+.. +..++++++++|+++.+|...+ ...++.. .++.++ +++.|++..
T Consensus 201 ~~~~~i~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 279 (333)
T 1wly_A 201 DFAEVVREITGGKGVDVVYDSIGKDT-LQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNR 279 (333)
T ss_dssp CHHHHHHHHHTTCCEEEEEECSCTTT-HHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSH
T ss_pred HHHHHHHHHhCCCCCeEEEECCcHHH-HHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCH
Confidence 4566777777 468999999999954 9999999999999999997653 3456666 677888 999887542
Q ss_pred ---CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 74 ---KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 74 ---~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.+.++++++++++|++ +++++++|||+++
T Consensus 280 ~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~ 311 (333)
T 1wly_A 280 SEIDEGSKCLFDAVKAGVL--HSSVAKTFPLREA 311 (333)
T ss_dssp HHHHHHHHHHHHHHHTTSC--CCCEEEEEEGGGH
T ss_pred HHHHHHHHHHHHHHHCCCc--CCCcceEEeHHHH
Confidence 1358899999999999 6689999999985
No 47
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=99.46 E-value=3.9e-14 Score=93.62 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=77.0
Q ss_pred HHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHHHHHHHc
Q 040104 8 KIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLCLEFLRS 86 (105)
Q Consensus 8 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~~ 86 (105)
.+++.++ ++|++||++|.+..+..++++++++|+++.+|....+..++...++.+++++.|++.+ ..+++++++++++
T Consensus 244 ~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~ 322 (366)
T 1yqd_A 244 QMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAK 322 (366)
T ss_dssp HHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHH
T ss_pred HHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHc
Confidence 4455554 8999999999875589999999999999999986655566767778899999998776 5789999999999
Q ss_pred CCCCCCCceeeeeeCCCC
Q 040104 87 GKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 87 g~i~~~~~i~~~~~l~~~ 104 (105)
|++++ .+ ++|||+|+
T Consensus 323 g~l~~--~~-~~~~l~~~ 337 (366)
T 1yqd_A 323 HNITA--DI-EVISTDYL 337 (366)
T ss_dssp TTCCC--CE-EEECGGGH
T ss_pred CCCCC--ce-EEEcHHHH
Confidence 99954 45 59999985
No 48
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=99.45 E-value=2.3e-14 Score=94.38 Aligned_cols=92 Identities=15% Similarity=0.206 Sum_probs=75.0
Q ss_pred HHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCcc-ccchhhhhcCeEEEEeecc-CCCHHHHHHHHH
Q 040104 8 KIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT-VPLTPAAAREVDVVGVFRY-KNTWPLCLEFLR 85 (105)
Q Consensus 8 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~ 85 (105)
.+++.+ +++|++||++|.+..++.++++++++|+++.+|....+.. ++.. ++.+++++.|++.+ ..++++++++++
T Consensus 237 ~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~ 314 (357)
T 2cf5_A 237 KMSELA-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCK 314 (357)
T ss_dssp HHHHST-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHhc-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHH
Confidence 444444 3899999999987568999999999999999997654444 5555 78899999998876 678999999999
Q ss_pred cCCCCCCCceeeeeeCCCC
Q 040104 86 SGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 86 ~g~i~~~~~i~~~~~l~~~ 104 (105)
+|++++ .+ ++|||+++
T Consensus 315 ~g~l~~--~~-~~~~l~~~ 330 (357)
T 2cf5_A 315 EKGLSS--II-EVVKMDYV 330 (357)
T ss_dssp HTTCCC--CE-EEEEGGGH
T ss_pred cCCCCC--ce-EEEeHHHH
Confidence 999954 45 59999985
No 49
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=99.44 E-value=3.5e-14 Score=93.15 Aligned_cols=86 Identities=12% Similarity=0.026 Sum_probs=74.5
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-CCcc-ccchhhh-hcCeEEEEeecc-CCCHHHHHHHHHcCCCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMT-VPLTPAA-AREVDVVGVFRY-KNTWPLCLEFLRSGKIDI 91 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~v~~g~i~~ 91 (105)
++|++||++|++..+..++++++++|+++.+|.+. .+.. ++...+. .+++++.|++.+ ..+++++++++++|++++
T Consensus 234 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~ 313 (348)
T 3two_A 234 ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYP 313 (348)
T ss_dssp CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCc
Confidence 79999999999856999999999999999999876 5555 6766777 899999999887 678999999999999954
Q ss_pred CCceeeeeeCCCC
Q 040104 92 KPLVTHRFGFSQK 104 (105)
Q Consensus 92 ~~~i~~~~~l~~~ 104 (105)
.+ ++|||+++
T Consensus 314 --~~-~~~~l~~~ 323 (348)
T 3two_A 314 --EI-DLILGKDI 323 (348)
T ss_dssp --CE-EEECGGGH
T ss_pred --eE-EEEEHHHH
Confidence 44 69999985
No 50
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=99.44 E-value=1.3e-13 Score=90.63 Aligned_cols=98 Identities=23% Similarity=0.417 Sum_probs=76.9
Q ss_pred hHHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc---CCCH-
Q 040104 3 AEEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY---KNTW- 77 (105)
Q Consensus 3 ~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~- 77 (105)
+++.+++++.++ +++|++|||+|++. +..++++++++|+++.+|.. .+..++...++.+++++.|+... .+++
T Consensus 225 ~~~~~~~~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 302 (351)
T 1yb5_A 225 VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQ 302 (351)
T ss_dssp TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHH
T ss_pred chHHHHHHHHcCCCCcEEEEECCChHH-HHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHH
Confidence 356677787774 58999999999875 89999999999999999964 33456666778899999998542 2334
Q ss_pred ---HHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 78 ---PLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 78 ---~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+.+.+++++|++ +++++++|||+++
T Consensus 303 ~~~~~l~~~~~~g~l--~~~i~~~~~l~~~ 330 (351)
T 1yb5_A 303 QYAAALQAGMEIGWL--KPVIGSQYPLEKV 330 (351)
T ss_dssp HHHHHHHHHHHHTCC--CCCEEEEEEGGGH
T ss_pred HHHHHHHHHHHCCCc--cCccceEEcHHHH
Confidence 445667888988 6789999999985
No 51
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=99.42 E-value=1.6e-13 Score=89.95 Aligned_cols=97 Identities=7% Similarity=0.026 Sum_probs=77.6
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc----------
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY---------- 73 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---------- 73 (105)
++.+.+++..++++|++|||+|++..+..++++++++|+++.+|... ..+++..+..+++++.+++.+
T Consensus 205 ~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (346)
T 3fbg_A 205 SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSHEFMFARPLNQTDDM 282 (346)
T ss_dssp CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEECCTTHHHHTTCTTT
T ss_pred cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEEEEEecccccchhhH
Confidence 45667777756699999999999887899999999999999987533 346666777899999987643
Q ss_pred ---CCCHHHHHHHHHcCCCCCCCceeeee---eCCCC
Q 040104 74 ---KNTWPLCLEFLRSGKIDIKPLVTHRF---GFSQK 104 (105)
Q Consensus 74 ---~~~~~~~~~~v~~g~i~~~~~i~~~~---~l~~~ 104 (105)
.+.++++++++++|++ ++.++++| ||+++
T Consensus 283 ~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~ 317 (346)
T 3fbg_A 283 IKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTTENI 317 (346)
T ss_dssp HHHHHHHHHHHHHHHTTSS--CCCEEEEEESCCHHHH
T ss_pred HHHHHHHHHHHHHHHCCCE--ECCccceecCCCHHHH
Confidence 1347889999999999 67788887 77764
No 52
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=99.41 E-value=3e-13 Score=87.98 Aligned_cols=99 Identities=18% Similarity=0.230 Sum_probs=77.2
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC-ccccchhhhhc-CeEEEEeec----c--
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAAR-EVDVVGVFR----Y-- 73 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~~~~~----~-- 73 (105)
++..+++.+.+ +.++|++|||+|. ..+..++++++++|+++.+|...+. ..++...+..+ ++++.+... .
T Consensus 195 ~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (327)
T 1qor_A 195 EDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR 273 (327)
T ss_dssp SCHHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSH
T ss_pred ccHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCH
Confidence 34567777777 4589999999995 4599999999999999999976542 45666677777 888875432 1
Q ss_pred ---CCCHHHHHHHHHcCCCCCCCcee--eeeeCCCC
Q 040104 74 ---KNTWPLCLEFLRSGKIDIKPLVT--HRFGFSQK 104 (105)
Q Consensus 74 ---~~~~~~~~~~v~~g~i~~~~~i~--~~~~l~~~ 104 (105)
.+.++++++++++|++ ++.++ ++|||+++
T Consensus 274 ~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~l~~~ 307 (327)
T 1qor_A 274 EELTEASNELFSLIASGVI--KVDVAEQQKYPLKDA 307 (327)
T ss_dssp HHHHHHHHHHHHHHHTTSS--CCCCCGGGEEEGGGH
T ss_pred HHHHHHHHHHHHHHHCCCc--ccccccCcEEcHHHH
Confidence 3457899999999999 55788 89999985
No 53
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=99.41 E-value=2.4e-13 Score=89.81 Aligned_cols=96 Identities=9% Similarity=0.134 Sum_probs=76.7
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc----------
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY---------- 73 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---------- 73 (105)
++.+.+++..++++|++|||+|++..++.++++++++|+++.+|.+ ..++...+..+++++.++..+
T Consensus 227 ~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~ 303 (363)
T 4dvj_A 227 PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMFTRPMFGTPDM 303 (363)
T ss_dssp CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTTHHHHHTCTTT
T ss_pred CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEeeccccccCcch
Confidence 4566777776679999999999987799999999999999999743 356677788899999987643
Q ss_pred ---CCCHHHHHHHHHcCCCCCCCceeeee---eCCCC
Q 040104 74 ---KNTWPLCLEFLRSGKIDIKPLVTHRF---GFSQK 104 (105)
Q Consensus 74 ---~~~~~~~~~~v~~g~i~~~~~i~~~~---~l~~~ 104 (105)
.+.++++++++++|++ ++.++++| ||+++
T Consensus 304 ~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~ 338 (363)
T 4dvj_A 304 SEQGRLLNDVSRLVDEGRL--RTTLTNRLSPINAANL 338 (363)
T ss_dssp HHHHHHHHHHHHHHHHTSS--CCCEEEEECSCSHHHH
T ss_pred hhHHHHHHHHHHHHHCCCe--eccccceecCCCHHHH
Confidence 1347889999999999 56777766 77764
No 54
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=99.40 E-value=2.4e-14 Score=93.65 Aligned_cols=99 Identities=13% Similarity=0.163 Sum_probs=74.0
Q ss_pred hHHHHHHHHHcC-CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhh-hcCeEEEEeec--------
Q 040104 3 AEEVEKIDKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA-AREVDVVGVFR-------- 72 (105)
Q Consensus 3 ~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~-------- 72 (105)
+++.+.+++.++ .++|++|||+|++. ...++++++++|+++.+|...+ ..+++..+. ..++.+.....
T Consensus 199 ~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (340)
T 3gms_A 199 APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWNDEVS 276 (340)
T ss_dssp SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTS-CCCCHHHHHHTSCCEEEECCHHHHHHHSC
T ss_pred ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCC-CCCCHHHhhhcccceEEEEEehhhhhhcC
Confidence 456778888884 59999999999987 6777899999999999997653 234443333 24445444321
Q ss_pred --c-CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 73 --Y-KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 73 --~-~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
. +..++++++++++|++++.. ++++|||+++
T Consensus 277 ~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~ 310 (340)
T 3gms_A 277 PYKWQETFRHLIRLVENEQLRFMK-VHSTYELADV 310 (340)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHH
Confidence 1 46789999999999997654 7889999985
No 55
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=99.38 E-value=1.2e-13 Score=91.42 Aligned_cols=87 Identities=11% Similarity=0.081 Sum_probs=70.5
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCc-cccchhhhhcCeEEEEeecc-CCCHHHHHHHHHcCCCCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAAREVDVVGVFRY-KNTWPLCLEFLRSGKIDIK 92 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~~g~i~~~ 92 (105)
+++|++||++|.+..++.++++++++|+++.+|....+. .++...++.+++++.|++.+ .++++++++++++|+++
T Consensus 256 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~-- 333 (369)
T 1uuf_A 256 KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIV-- 333 (369)
T ss_dssp TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCC--
T ss_pred cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCC--
Confidence 589999999998866999999999999999999865444 56666778899999998776 67899999999999994
Q ss_pred CceeeeeeCCCC
Q 040104 93 PLVTHRFGFSQK 104 (105)
Q Consensus 93 ~~i~~~~~l~~~ 104 (105)
+.++ +|||+++
T Consensus 334 ~~i~-~~~l~~~ 344 (369)
T 1uuf_A 334 ADIE-MIRADQI 344 (369)
T ss_dssp CCEE-EECGGGH
T ss_pred cceE-EEcHHHH
Confidence 4565 7999985
No 56
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=99.37 E-value=9.9e-14 Score=91.43 Aligned_cols=85 Identities=15% Similarity=0.224 Sum_probs=73.1
Q ss_pred CCCcEEEEccCC--hHHHHHHHHhhhcCCEEEEEcCCCCCc-cccchhhhhcCeEEEEeecc-CCCHHHHHHHHHcCCCC
Q 040104 15 TGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAAREVDVVGVFRY-KNTWPLCLEFLRSGKID 90 (105)
Q Consensus 15 ~g~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~~g~i~ 90 (105)
+++|++||++|+ +..+..++++++++|+++.+|.... . .++...++.+++++.|++.+ ..+++++++++++|++
T Consensus 242 ~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l- 319 (360)
T 1piw_A 242 DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI- 319 (360)
T ss_dssp SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTC-
T ss_pred cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCC-
Confidence 489999999998 5558999999999999999998655 4 56666778899999998776 6789999999999999
Q ss_pred CCCceeeeeeCCC
Q 040104 91 IKPLVTHRFGFSQ 103 (105)
Q Consensus 91 ~~~~i~~~~~l~~ 103 (105)
++.+ ++|||++
T Consensus 320 -~~~i-~~~~l~~ 330 (360)
T 1piw_A 320 -KIWV-ETLPVGE 330 (360)
T ss_dssp -CCCE-EEEESSH
T ss_pred -cceE-EEEeccH
Confidence 4557 7999998
No 57
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=99.36 E-value=4.9e-13 Score=88.01 Aligned_cols=93 Identities=11% Similarity=0.210 Sum_probs=72.7
Q ss_pred HHHHcCC--CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-CCccccchhhhhcCeEEEEeecc-----------C
Q 040104 9 IDKAMGT--GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAAREVDVVGVFRY-----------K 74 (105)
Q Consensus 9 ~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----------~ 74 (105)
+++.+++ ++|++|||+|++. ...++++++++|+++.+|... .+..++...+..+++++.|++.. +
T Consensus 231 ~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 309 (357)
T 1zsy_A 231 MKNFFKDMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFK 309 (357)
T ss_dssp GGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHH
T ss_pred HHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHH
Confidence 4444532 6999999999887 678999999999999998643 34556666778899999998642 2
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 75 NTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 75 ~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
..++++++++++|++++ .+.++|||+++
T Consensus 310 ~~~~~~~~l~~~g~l~~--~~~~~~~l~~~ 337 (357)
T 1zsy_A 310 ELILTLCDLIRRGQLTA--PACSQVPLQDY 337 (357)
T ss_dssp HHHHHHHHHHHTTSSCC--CCEEEEEGGGH
T ss_pred HHHHHHHHHHHcCCCcC--ccceEEcHHHH
Confidence 35788999999999954 46689999985
No 58
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=99.36 E-value=4.9e-13 Score=88.22 Aligned_cols=100 Identities=17% Similarity=0.199 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC---c---cc---c-chhhhhcCeEEEEeecc
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE---M---TV---P-LTPAAAREVDVVGVFRY 73 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~---~~---~-~~~~~~~~~~i~~~~~~ 73 (105)
++.+.+++.+++++|++|||+|... +..++++++++|+++.+|..... . .+ . ...++.+++++.|++..
T Consensus 219 ~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 297 (362)
T 2c0c_A 219 PVGTVLKQEYPEGVDVVYESVGGAM-FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLN 297 (362)
T ss_dssp CHHHHHHHHCTTCEEEEEECSCTHH-HHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGG
T ss_pred hHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhh
Confidence 4556777777678999999999864 99999999999999999974321 1 01 1 13567899999998753
Q ss_pred ------CCCHHHHHHHHHcCCCCCCCc------eeeeeeCCCC
Q 040104 74 ------KNTWPLCLEFLRSGKIDIKPL------VTHRFGFSQK 104 (105)
Q Consensus 74 ------~~~~~~~~~~v~~g~i~~~~~------i~~~~~l~~~ 104 (105)
++.++++++++++|++++... +++.|||+++
T Consensus 298 ~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~ 340 (362)
T 2c0c_A 298 HYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESI 340 (362)
T ss_dssp GCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHH
T ss_pred hhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHH
Confidence 346899999999999965432 3456899875
No 59
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=99.34 E-value=1.2e-12 Score=86.06 Aligned_cols=98 Identities=21% Similarity=0.296 Sum_probs=75.8
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-Cccccc---------hhhhhcCeEEEEeecc
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPL---------TPAAAREVDVVGVFRY 73 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~---------~~~~~~~~~i~~~~~~ 73 (105)
++.+.+++.+++++|++|||+|+. .+..++++++++|+++.+|.... ...++. ..++.+++++.|++..
T Consensus 218 ~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 296 (357)
T 2zb4_A 218 NVAEQLRESCPAGVDVYFDNVGGN-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVL 296 (357)
T ss_dssp CHHHHHHHHCTTCEEEEEESCCHH-HHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGG
T ss_pred HHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehh
Confidence 456777877755899999999975 49999999999999999997542 122332 3567899999998653
Q ss_pred ------CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 74 ------KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 74 ------~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
.+.++++++++++|++++. +..+|||+++
T Consensus 297 ~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~ 331 (357)
T 2zb4_A 297 NYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENM 331 (357)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECGGGH
T ss_pred hhhHHHHHHHHHHHHHHHcCCCcCc--cceecCHHHH
Confidence 3568999999999999654 4456999875
No 60
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=99.34 E-value=1.2e-13 Score=89.90 Aligned_cols=89 Identities=18% Similarity=0.300 Sum_probs=70.6
Q ss_pred cCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-------CCCHHHHHHHH
Q 040104 13 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY-------KNTWPLCLEFL 84 (105)
Q Consensus 13 ~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~v 84 (105)
+++++|++|||+|++. +..++++++++|+++.+|...+ +..++...++.+++++.|+... .+.++++++++
T Consensus 214 ~~~~~d~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 292 (330)
T 1tt7_A 214 SKQQWQGAVDPVGGKQ-LASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDL 292 (330)
T ss_dssp CCCCEEEEEESCCTHH-HHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTS
T ss_pred hcCCccEEEECCcHHH-HHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHH
Confidence 3458999999999964 9999999999999999997653 3456666778899999997432 12456667777
Q ss_pred HcCCCCCCCceeeeeeCCCC
Q 040104 85 RSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 85 ~~g~i~~~~~i~~~~~l~~~ 104 (105)
.+|++ +++++++|||+++
T Consensus 293 ~~g~l--~~~i~~~~~l~~~ 310 (330)
T 1tt7_A 293 KPDQL--LTIVDREVSLEET 310 (330)
T ss_dssp CCSCS--TTSEEEEECSTTH
T ss_pred hcCCc--ccccceEEcHHHH
Confidence 78888 6788999999985
No 61
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.32 E-value=1.7e-12 Score=93.03 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=75.6
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-------C
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-------K 74 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~ 74 (105)
.++.+.+++.| |+|+|+|||++|++. +..++++++++|+++.+|.........+. ...+++++.+.... .
T Consensus 398 ~~~~~~i~~~t~g~GvDvVld~~gg~~-~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 475 (795)
T 3slk_A 398 CDFEQQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIG 475 (795)
T ss_dssp STHHHHHHHHSCSSCCSEEEECCCTTT-THHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHH
T ss_pred hhHHHHHHHHcCCCCeEEEEECCCcHH-HHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHH
Confidence 45778899999 569999999999876 89999999999999999975432222221 23467777665331 4
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 75 NTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 75 ~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+.++++++++++|++ +++++++|||+++
T Consensus 476 ~~l~~~~~l~~~g~l--~p~~~~~~~l~~~ 503 (795)
T 3slk_A 476 EMLHELVELFEGRVL--EPLPVTAWDVRQA 503 (795)
T ss_dssp HHHHHHHHHHHTTSC--CCCCEEEEEGGGH
T ss_pred HHHHHHHHHHHcCCc--CCCcceeEcHHHH
Confidence 578999999999999 5678889999985
No 62
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=99.31 E-value=2.4e-12 Score=83.92 Aligned_cols=99 Identities=21% Similarity=0.263 Sum_probs=75.8
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC------Cc-cccchhhhhcCeEEEEeecc--
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH------EM-TVPLTPAAAREVDVVGVFRY-- 73 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~-~~~~~~~~~~~~~i~~~~~~-- 73 (105)
+++.+.+++.+++++|++||++|.+. +..++++++++|+++.+|.... +. ..+...++.+++++.|+..+
T Consensus 201 ~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 279 (333)
T 1v3u_A 201 NSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW 279 (333)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGC
T ss_pred HHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhc
Confidence 34566777777668999999999875 9999999999999999997542 11 13455678899999998754
Q ss_pred -----CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 74 -----KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 74 -----~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++.++++++++++|++++.. ..++||+++
T Consensus 280 ~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~ 313 (333)
T 1v3u_A 280 QGDVREKALRDLMKWVLEGKIQYHE--HVTKGFENM 313 (333)
T ss_dssp CTHHHHHHHHHHHHHHHTTSSCCCE--EEEECGGGH
T ss_pred chHHHHHHHHHHHHHHHCCCccCcc--ccccCHHHH
Confidence 24577899999999996654 345799875
No 63
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=99.30 E-value=8.7e-14 Score=90.37 Aligned_cols=89 Identities=16% Similarity=0.202 Sum_probs=73.4
Q ss_pred HcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-------CCCHHHHHHH
Q 040104 12 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY-------KNTWPLCLEF 83 (105)
Q Consensus 12 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~ 83 (105)
.+++++|++|||+|++. ++.++++++++|+++.+|.... ..+++...++.+++++.|+... .+.+++++++
T Consensus 207 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 285 (324)
T 3nx4_A 207 LEKQLWAGAIDTVGDKV-LAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKD 285 (324)
T ss_dssp SCCCCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred hcCCCccEEEECCCcHH-HHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHH
Confidence 34568999999999874 9999999999999999997654 3456777788999999998653 2467889999
Q ss_pred HHcCCCCCCCceeeeeeCCCC
Q 040104 84 LRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 84 v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+++|++ +++ +++|||+++
T Consensus 286 ~~~g~l--~~~-~~~~~l~~~ 303 (324)
T 3nx4_A 286 LPESFY--AQA-ATEITLADA 303 (324)
T ss_dssp SCHHHH--HHH-EEEEEGGGH
T ss_pred HHcCCC--CCC-ceeEeHHHH
Confidence 999998 455 889999985
No 64
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=99.29 E-value=5.3e-13 Score=86.73 Aligned_cols=85 Identities=13% Similarity=0.154 Sum_probs=69.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc--CCCHHHHHHHHHcCCCCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY--KNTWPLCLEFLRSGKIDIK 92 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~v~~g~i~~~ 92 (105)
+++|++|||+|++. +..++++++++|+++.+|...... ....+..+++++.+++.. .++++++++++++|++ +
T Consensus 214 ~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~ 288 (321)
T 3tqh_A 214 TPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKL--R 288 (321)
T ss_dssp SCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSS--C
T ss_pred cCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCc--c
Confidence 47999999999988 699999999999999998644221 223456788999886543 5689999999999999 5
Q ss_pred CceeeeeeCCCC
Q 040104 93 PLVTHRFGFSQK 104 (105)
Q Consensus 93 ~~i~~~~~l~~~ 104 (105)
+.++++|||+++
T Consensus 289 ~~i~~~~~l~~~ 300 (321)
T 3tqh_A 289 IEISRIFQLSEA 300 (321)
T ss_dssp CCEEEEECGGGH
T ss_pred cccccEEcHHHH
Confidence 579999999985
No 65
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=99.27 E-value=1.7e-12 Score=83.63 Aligned_cols=86 Identities=19% Similarity=0.333 Sum_probs=68.5
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCC-ccccchhhhhcCeEEEEeecc-----CCCHHHHHH---HHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAAREVDVVGVFRY-----KNTWPLCLE---FLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~---~v~ 85 (105)
+++|++|| +|+.. +..++++++++|+++.+|..... ..+++..++.+++++.|+... +..++++++ +++
T Consensus 188 ~~~d~vid-~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 265 (302)
T 1iz0_A 188 GGLDLVLE-VRGKE-VEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL 265 (302)
T ss_dssp TSEEEEEE-CSCTT-HHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGB
T ss_pred cCceEEEE-CCHHH-HHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHH
Confidence 58999999 99854 99999999999999999976532 346666778899999998752 457899999 999
Q ss_pred cCCCCCCCceeeeeeCCCC
Q 040104 86 SGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 86 ~g~i~~~~~i~~~~~l~~~ 104 (105)
+|++ +++++++|||+++
T Consensus 266 ~g~l--~~~i~~~~~l~~~ 282 (302)
T 1iz0_A 266 GREL--RPVVGPVFPFAEA 282 (302)
T ss_dssp TTTB--CCCEEEEEEGGGH
T ss_pred cCCc--ccccceEEcHHHH
Confidence 9998 6789999999985
No 66
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=99.20 E-value=3.7e-13 Score=87.23 Aligned_cols=88 Identities=14% Similarity=0.176 Sum_probs=55.6
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccc--hhhhhcCeEEEEeecc---------CCCHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL--TPAAAREVDVVGVFRY---------KNTWPLCLE 82 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~i~~~~~~---------~~~~~~~~~ 82 (105)
++++|++|||+|++. +..++++++++|+++.+|.......++. ..+.++++++.+++.+ .+.++++++
T Consensus 197 ~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (315)
T 3goh_A 197 TQKYFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLT 275 (315)
T ss_dssp CSCEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHH
T ss_pred CCCccEEEECCCchh-HHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHH
Confidence 578999999999987 6899999999999999986443222221 1223344444444332 124688999
Q ss_pred HHHcCCCCCCCceeeeeeCCCC
Q 040104 83 FLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 83 ~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++|++ +++++++|||+++
T Consensus 276 l~~~g~l--~~~i~~~~~l~~~ 295 (315)
T 3goh_A 276 LIAQGKM--EIAAPDIFRFEQM 295 (315)
T ss_dssp HHHTTSS--CCCCCEEEEGGGH
T ss_pred HHHCCCc--ccccceEecHHHH
Confidence 9999998 6789999999985
No 67
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=99.19 E-value=2.5e-12 Score=83.69 Aligned_cols=91 Identities=20% Similarity=0.305 Sum_probs=67.0
Q ss_pred HHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc-------CCCHHHH
Q 040104 9 IDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY-------KNTWPLC 80 (105)
Q Consensus 9 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~ 80 (105)
+++.+++++|++|||+|++. +..++++++++|+++.+|...+ ...+++..++.+++++.|+... .+.++++
T Consensus 209 ~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 287 (328)
T 1xa0_A 209 IRPLDKQRWAAAVDPVGGRT-LATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERL 287 (328)
T ss_dssp ---CCSCCEEEEEECSTTTT-HHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHH
T ss_pred HHHhcCCcccEEEECCcHHH-HHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHH
Confidence 44445568999999999965 9999999999999999997653 3456666778899999997432 1235566
Q ss_pred HHHHHcCCCCCCCceeeeeeCCCC
Q 040104 81 LEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 81 ~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++++.+| + ++ ++++|||+++
T Consensus 288 ~~~~~~g-l--~~-~~~~~~l~~~ 307 (328)
T 1xa0_A 288 AGDLKPD-L--ER-IAQEISLAEL 307 (328)
T ss_dssp HTTTCCC-H--HH-HEEEEEGGGH
T ss_pred HHHHHcC-C--ce-eeeEeCHHHH
Confidence 6666666 6 44 4689999985
No 68
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=99.09 E-value=9.1e-12 Score=82.64 Aligned_cols=98 Identities=13% Similarity=0.187 Sum_probs=70.1
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhh-----cC-----------CEEEEEcCCCCCccccchhhhhcCe
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATR-----AG-----------GKVCLVGMGHHEMTVPLTPAAAREV 65 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~ 65 (105)
+++.+++++.+ +.|+|++|||+|++..+..++++++ ++ |+++.+|... ..++++..++.+++
T Consensus 226 ~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~-~~~~~~~~~~~~~~ 304 (379)
T 3iup_A 226 PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLD-TSPTEFNRNFGMAW 304 (379)
T ss_dssp TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSE-EEEEEECCCSCSCE
T ss_pred hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCC-CCccccccccccce
Confidence 46778888888 4599999999999876788888886 44 5666655432 12344455677899
Q ss_pred EEEEeecc-------C----CCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 66 DVVGVFRY-------K----NTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 66 ~i~~~~~~-------~----~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
++.|++.. . +.++++++++.+ ++ +++++++|||+|+
T Consensus 305 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--~~~i~~~~~l~~~ 351 (379)
T 3iup_A 305 GMGGWLLFPFLQKIGRERANALKQRVVAELKT-TF--ASHYSKEISLAEV 351 (379)
T ss_dssp EEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TT--CCCCSEEEEHHHH
T ss_pred EEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cC--CCcceEEecHHHh
Confidence 99997643 1 234666677766 45 7789999999875
No 69
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=99.07 E-value=1.8e-10 Score=69.92 Aligned_cols=87 Identities=17% Similarity=0.268 Sum_probs=64.6
Q ss_pred HHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC--CccccchhhhhcCeEEEEeec------c-
Q 040104 4 EEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAAREVDVVGVFR------Y- 73 (105)
Q Consensus 4 ~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~------~- 73 (105)
+..+.+.+.+ ++++|++||++|... +..++++++++|+++.+|.... ...+++. .+.+++++.+... .
T Consensus 94 ~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1pqw_A 94 DFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASFSVVDLDLNLKLQP 171 (198)
T ss_dssp THHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEEEECCHHHHHHHCH
T ss_pred HHHHHHHHHhCCCCCeEEEECCchHH-HHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEEEEEehHHhhccCH
Confidence 4556777777 458999999998755 9999999999999999997542 2234333 3467888876421 1
Q ss_pred ---CCCHHHHHHHHHcCCCCCC
Q 040104 74 ---KNTWPLCLEFLRSGKIDIK 92 (105)
Q Consensus 74 ---~~~~~~~~~~v~~g~i~~~ 92 (105)
.+.++++++++++|++++.
T Consensus 172 ~~~~~~~~~~~~l~~~g~l~~~ 193 (198)
T 1pqw_A 172 ARYRQLLQHILQHVADGKLEVL 193 (198)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHHHHHHcCCccCC
Confidence 4678999999999999653
No 70
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=99.03 E-value=5.8e-11 Score=78.58 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=67.0
Q ss_pred HHHHHHHHcCCCCcEEEEccCCh-HHHHHHHHhhhcCCEEEEEcCCCCC-c-c--ccc------hhhhh-------cCeE
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMGHHE-M-T--VPL------TPAAA-------REVD 66 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~-~-~--~~~------~~~~~-------~~~~ 66 (105)
+.+++++. .++|++|||+|++ ..+..++++++++|+++.+|..... . . +.. ..+.. ++.+
T Consensus 239 ~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 316 (375)
T 2vn8_A 239 VEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVH 316 (375)
T ss_dssp HHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcc
Confidence 44444442 5899999999998 4568999999999999999964321 0 0 111 01111 4555
Q ss_pred EEEeecc--CCCHHHHHHHHHcCCCCCCCceeeeeeCCCC
Q 040104 67 VVGVFRY--KNTWPLCLEFLRSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 67 i~~~~~~--~~~~~~~~~~v~~g~i~~~~~i~~~~~l~~~ 104 (105)
+.+.+.. .+.++++++++++|++ +++++++|||+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~ 354 (375)
T 2vn8_A 317 YRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPFSKV 354 (375)
T ss_dssp EEECCCCCCHHHHHHHHHHHHTTSC--CCCEEEEEEGGGH
T ss_pred eEEEEeCCCHHHHHHHHHHHHCCCc--ccCcCeEECHHHH
Confidence 5544332 3467999999999998 6789999999985
No 71
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.86 E-value=2.1e-09 Score=84.42 Aligned_cols=99 Identities=15% Similarity=0.243 Sum_probs=72.0
Q ss_pred hHHHHHHHHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC-CccccchhhhhcCeEEEEeecc------C
Q 040104 3 AEEVEKIDKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAAREVDVVGVFRY------K 74 (105)
Q Consensus 3 ~~~~~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~------~ 74 (105)
.++.+.+++.+ +.|+|+||||+|+. .+..++++++++|+++.+|.... ........+..+++++.++... .
T Consensus 1726 ~~~~~~i~~~t~g~GvDvVld~~g~~-~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 1804 (2512)
T 2vz8_A 1726 TSFEQHVLRHTAGKGVDLVLNSLAEE-KLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGG 1804 (2512)
T ss_dssp SHHHHHHHHTTTSCCEEEEEECCCHH-HHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCC
T ss_pred HHHHHHHHHhcCCCCceEEEECCCch-HHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCH
Confidence 35677888888 56999999999865 49999999999999999996431 1111223456788999887542 2
Q ss_pred CCHHHHHHHH----HcCCCCCCCceeeeeeCCCC
Q 040104 75 NTWPLCLEFL----RSGKIDIKPLVTHRFGFSQK 104 (105)
Q Consensus 75 ~~~~~~~~~v----~~g~i~~~~~i~~~~~l~~~ 104 (105)
..++++++++ .+|++ +++++++||++++
T Consensus 1805 ~~~~~~l~~l~~~~~~g~l--~p~i~~~f~l~ei 1836 (2512)
T 2vz8_A 1805 ATWQEVSELLKAGIQEGVV--QPLKCTVFPRTKV 1836 (2512)
T ss_dssp HHHHHHHHHHHHHHTTTCS--CCCCEEEEESSTH
T ss_pred HHHHHHHHHHHHHHHcCCc--CCCcceEecHHHH
Confidence 3456666655 46777 6678899999985
No 72
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.28 E-value=0.00016 Score=47.76 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=52.4
Q ss_pred CCcEEEEccCChHH------HHHHHHhhhcCCEEEEEcCCCC-------CccccchhhhhcCeEEEEeecc---------
Q 040104 16 GIDVSFDCAGFNKT------MSTALSATRAGGKVCLVGMGHH-------EMTVPLTPAAAREVDVVGVFRY--------- 73 (105)
Q Consensus 16 g~d~vid~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~--------- 73 (105)
++|++|+|+|.+.. ....++.++++|+++.+|...+ +.+++...+..+++++.+....
T Consensus 230 ~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s 309 (361)
T 1pjc_A 230 EADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTAT 309 (361)
T ss_dssp TCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHH
T ss_pred CCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHH
Confidence 69999999987652 5678899999999999987542 2345555566788888775421
Q ss_pred ----CCCHHHHHHHHHcC
Q 040104 74 ----KNTWPLCLEFLRSG 87 (105)
Q Consensus 74 ----~~~~~~~~~~v~~g 87 (105)
...++.+++++.+|
T Consensus 310 ~~~~~~~~~~l~~l~~~G 327 (361)
T 1pjc_A 310 QALNNSTLPYVVKLANQG 327 (361)
T ss_dssp HHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 23457788888877
No 73
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.65 E-value=0.00087 Score=44.35 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=43.4
Q ss_pred CCcEEEEccCChHH------HHHHHHhhhcCCEEEEEcCCCC-------CccccchhhhhcCeEEEEeecc---------
Q 040104 16 GIDVSFDCAGFNKT------MSTALSATRAGGKVCLVGMGHH-------EMTVPLTPAAAREVDVVGVFRY--------- 73 (105)
Q Consensus 16 g~d~vid~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~--------- 73 (105)
++|++|+|+|.+.. ....++.++++|+++.+|...+ +.+++...+..+++++.+....
T Consensus 229 ~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as 308 (369)
T 2eez_A 229 HADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTST 308 (369)
T ss_dssp HCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHH
T ss_pred CCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHH
Confidence 68999999997642 5778999999999999987542 2233433445678887765321
Q ss_pred ----CCCHHHHHHHHHcC
Q 040104 74 ----KNTWPLCLEFLRSG 87 (105)
Q Consensus 74 ----~~~~~~~~~~v~~g 87 (105)
...++.+++++.+|
T Consensus 309 ~~~~~~~~~~l~~l~~~g 326 (369)
T 2eez_A 309 FALTNQTLPYVLKLAEKG 326 (369)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 23467788888776
No 74
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.48 E-value=0.00041 Score=46.10 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=49.1
Q ss_pred CCcEEEEccCChHH------HHHHHHhhhcCCEEEEEcCCC-------CCccccchhhhhcCeEEEEeecc---------
Q 040104 16 GIDVSFDCAGFNKT------MSTALSATRAGGKVCLVGMGH-------HEMTVPLTPAAAREVDVVGVFRY--------- 73 (105)
Q Consensus 16 g~d~vid~~g~~~~------~~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~~~~~~~i~~~~~~--------- 73 (105)
++|++|+|++.+.. ....++.++++|+++.+|... .+.+++...+..+++.+.++..-
T Consensus 231 ~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as 310 (377)
T 2vhw_A 231 RADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTST 310 (377)
T ss_dssp HCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHH
T ss_pred CCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHH
Confidence 58999999987653 578899999999999998643 23344444455677777655432
Q ss_pred ----CCCHHHHHHHHHcC
Q 040104 74 ----KNTWPLCLEFLRSG 87 (105)
Q Consensus 74 ----~~~~~~~~~~v~~g 87 (105)
...++.+++++.+|
T Consensus 311 ~~~~~~~~~~~~~l~~~g 328 (377)
T 2vhw_A 311 YALTNATMPYVLELADHG 328 (377)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 12246666777665
No 75
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.19 E-value=0.003 Score=42.05 Aligned_cols=81 Identities=11% Similarity=0.148 Sum_probs=54.9
Q ss_pred HHHHcCCCCcEEEEcc---CChH--HH-HHHHHhhhcCCEEEEEcCCC-CCcc--ccchhhhhcCeEEEEeeccCC-CHH
Q 040104 9 IDKAMGTGIDVSFDCA---GFNK--TM-STALSATRAGGKVCLVGMGH-HEMT--VPLTPAAAREVDVVGVFRYKN-TWP 78 (105)
Q Consensus 9 ~~~~~~~g~d~vid~~---g~~~--~~-~~~~~~l~~~G~~v~~g~~~-~~~~--~~~~~~~~~~~~i~~~~~~~~-~~~ 78 (105)
+.+.. .++|++|+|+ |.+. .+ .+.++.++++++++.+|... +... .+...+..+++++.++...+. ..+
T Consensus 251 l~~~~-~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~~~~~ 329 (384)
T 1l7d_A 251 VLKEL-VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAA 329 (384)
T ss_dssp HHHHH-TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGGGGHH
T ss_pred HHHHh-CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcchhHH
Confidence 44443 3699999999 5322 23 77899999999999999643 3322 233345578899988766533 356
Q ss_pred HHHHHHHcCCCC
Q 040104 79 LCLEFLRSGKID 90 (105)
Q Consensus 79 ~~~~~v~~g~i~ 90 (105)
++.+++.++.++
T Consensus 330 ~a~~l~~~~~~~ 341 (384)
T 1l7d_A 330 DASPLFAKNLLN 341 (384)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhHHH
Confidence 688888877654
No 76
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.08 E-value=0.0045 Score=41.50 Aligned_cols=72 Identities=13% Similarity=0.189 Sum_probs=46.7
Q ss_pred CCcEEEEccCCh-----HHH-HHHHHhhhcCCEEEEEcCCC-CCccccc--h-hhhhcCeEEEEeeccCCCHH-HHHHHH
Q 040104 16 GIDVSFDCAGFN-----KTM-STALSATRAGGKVCLVGMGH-HEMTVPL--T-PAAAREVDVVGVFRYKNTWP-LCLEFL 84 (105)
Q Consensus 16 g~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~~-~~~~~~~--~-~~~~~~~~i~~~~~~~~~~~-~~~~~v 84 (105)
++|++|++++.+ ..+ .+.++.++++|+++.+|... +...... . .+..+++++.|+...+..++ ++.+++
T Consensus 255 ~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~~~~~~a~~ll 334 (401)
T 1x13_A 255 EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLY 334 (401)
T ss_dssp HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGGGSHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcccCHHHHHHHH
Confidence 689999995332 223 67999999999999999753 3333322 2 14568899998765533343 355555
Q ss_pred HcC
Q 040104 85 RSG 87 (105)
Q Consensus 85 ~~g 87 (105)
.++
T Consensus 335 ~~~ 337 (401)
T 1x13_A 335 GTN 337 (401)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 77
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.48 E-value=0.019 Score=39.61 Aligned_cols=45 Identities=9% Similarity=0.148 Sum_probs=34.9
Q ss_pred CCcEEEEccCChHHHH-HHHHhhhcCCEEEEEcCCCCCccccchhhhh
Q 040104 16 GIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHHEMTVPLTPAAA 62 (105)
Q Consensus 16 g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 62 (105)
++|++++|+|....+. ..++.++++|+++.+|.... +++...+..
T Consensus 329 ~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--eId~~aL~~ 374 (494)
T 3ce6_A 329 DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--EIDMAGLER 374 (494)
T ss_dssp GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--GBCHHHHHH
T ss_pred CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--ccCHHHHHH
Confidence 6899999999887666 79999999999999986432 344444443
No 78
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.87 E-value=0.11 Score=31.71 Aligned_cols=34 Identities=9% Similarity=-0.043 Sum_probs=29.2
Q ss_pred CCCcEEEEccCCh-HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|+|+...+.+ ..+..+.++|+++|+++....
T Consensus 157 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 157 GIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4699999988876 678999999999999998853
No 79
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=92.76 E-value=0.15 Score=30.00 Aligned_cols=41 Identities=22% Similarity=0.374 Sum_probs=28.5
Q ss_pred HHHHHc-CCCCcEEE-----EccCCh------------HHHHHHHHhhhcCCEEEEEcC
Q 040104 8 KIDKAM-GTGIDVSF-----DCAGFN------------KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 8 ~~~~~~-~~g~d~vi-----d~~g~~------------~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+.+.. ++.+|+|+ +++|.. ..+..+.++|++||+++..-.
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 344444 35799999 444442 457789999999999998643
No 80
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=92.07 E-value=0.79 Score=29.60 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=46.7
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hhh----hc-CeEEEEeecc--CCCHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PAA----AR-EVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~----~~-~~~i~~~~~~--~~~~~~~~~~v 84 (105)
..+|+|+.|++.....+.+..+++.| ..+.+.- +...+.. .+. .+ ++.+.-.+.. ...+..+.+++
T Consensus 70 ~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i 145 (346)
T 3cea_A 70 ENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIV 145 (346)
T ss_dssp SCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHH
T ss_pred CCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHH
Confidence 47999999999988788888888875 4454432 2223322 221 23 5555433333 55789999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|.+
T Consensus 146 ~~g~i 150 (346)
T 3cea_A 146 DNGDI 150 (346)
T ss_dssp HTTTT
T ss_pred HcCCC
Confidence 99987
No 81
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=90.56 E-value=0.39 Score=31.07 Aligned_cols=34 Identities=9% Similarity=0.003 Sum_probs=27.3
Q ss_pred CCCcEEEEccCCh---HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-....+ ..+....+.|+|||++++...
T Consensus 187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 187 LEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 5799999765443 468899999999999998754
No 82
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=88.79 E-value=0.69 Score=30.39 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=30.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH 51 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 51 (105)
.|+|++++|+|.-...+.+-..++.|.+.|++..+..
T Consensus 88 ~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~ 124 (332)
T 3pym_A 88 SNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS 124 (332)
T ss_dssp TTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCS
T ss_pred cCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCC
Confidence 3899999999987778889999998887777766543
No 83
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=88.49 E-value=0.6 Score=30.73 Aligned_cols=36 Identities=14% Similarity=0.260 Sum_probs=30.1
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH 51 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 51 (105)
|+|++++|+|.-...+.+-..++.|.+.+++..+..
T Consensus 93 gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~ 128 (337)
T 3v1y_O 93 GAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK 128 (337)
T ss_dssp TCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS
T ss_pred CCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 899999999987778888899998887777766543
No 84
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=88.38 E-value=0.86 Score=26.07 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=26.2
Q ss_pred CCCcEEEEccCC--hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+...+. ...+..+.++|+++|+++....
T Consensus 93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 579999865433 3368999999999999998754
No 85
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=88.11 E-value=1 Score=25.43 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=26.4
Q ss_pred CCCCcEEEE-----ccCC------------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 14 GTGIDVSFD-----CAGF------------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 14 ~~g~d~vid-----~~g~------------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++.+|+|+. ..+. ...+..+.++|+++|+++....
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 457999997 3333 2557888999999999998654
No 86
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=87.65 E-value=0.25 Score=30.62 Aligned_cols=33 Identities=15% Similarity=0.059 Sum_probs=26.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+. ...+..+....++|++||++++...
T Consensus 147 ~~fD~v~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 147 TSMDAIIR-IYAPCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp TCEEEEEE-ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred CceeEEEE-eCChhhHHHHHHhcCCCcEEEEEEc
Confidence 46899985 4445569999999999999998753
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=86.92 E-value=1.4 Score=26.27 Aligned_cols=34 Identities=9% Similarity=-0.007 Sum_probs=26.2
Q ss_pred CCcEEEEccCC-hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGF-NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+|+|+...+. ...+..+.++|+++|+++.....
T Consensus 122 ~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 122 LPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp CCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence 68998865443 32688999999999999987643
No 88
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=86.84 E-value=1.1 Score=26.41 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=26.6
Q ss_pred CCCcEEEEccC---ChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+|+|+.... -...+..+.++|+++|+++....
T Consensus 107 ~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 107 PDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 46899987654 23468889999999999998754
No 89
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=86.77 E-value=2.6 Score=27.46 Aligned_cols=71 Identities=17% Similarity=0.142 Sum_probs=46.5
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|+......+.+..+++.|-. |.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.+++.
T Consensus 88 ~~~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 163 (350)
T 3rc1_A 88 DDVDAVYVPLPAVLHAEWIDRALRAGKH-VLAE---KPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLD 163 (350)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHHHTTCE-EEEE---SSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHH
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCCc-EEEe---CCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHh
Confidence 4799999999998878888888876644 4442 22222322 22 2344444433332 788999999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 164 ~G~i 167 (350)
T 3rc1_A 164 EGVI 167 (350)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 90
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=86.58 E-value=1.1 Score=29.61 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=29.1
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH 51 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 51 (105)
|+|++++|+|.-...+.+-..++.|.+-+++..+..
T Consensus 94 gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~ 129 (346)
T 3h9e_O 94 GSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP 129 (346)
T ss_dssp TSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS
T ss_pred cccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 899999999987778888889998876666665543
No 91
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=86.38 E-value=0.72 Score=30.32 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=29.8
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
++|+||+|+|.....+.+-..++.|.+.+.++.+.
T Consensus 91 gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~ 125 (337)
T 1rm4_O 91 GIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG 125 (337)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcc
Confidence 79999999998777888888899888888887653
No 92
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.09 E-value=0.5 Score=32.18 Aligned_cols=36 Identities=19% Similarity=0.477 Sum_probs=30.5
Q ss_pred CCcEEEEccCChHHHH-HHHHhhhcCCEEEEEcCCCC
Q 040104 16 GIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHH 51 (105)
Q Consensus 16 g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 51 (105)
..|+++.|+|....+. +.+..+++++.++.+|....
T Consensus 275 ~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 275 QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 6899999988777666 89999999999999986543
No 93
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=85.83 E-value=0.88 Score=29.89 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=27.9
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
++|+||+|+|.....+.+-..++.|.+.+++..+.
T Consensus 92 ~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 92 GVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp TCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 79999999998777888888888888756665443
No 94
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=85.51 E-value=2 Score=27.56 Aligned_cols=71 Identities=14% Similarity=0.206 Sum_probs=46.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| .-+.+-- |...+.. .+ -.++..+.-.+.. ...+..+.+++.
T Consensus 62 ~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 137 (331)
T 4hkt_A 62 ADIDAVVICTPTDTHADLIERFARAG-KAIFCEK---PIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAID 137 (331)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECS---CSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEec---CCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHH
Confidence 47999999999888778888887776 4444432 2222222 22 2244444433332 678899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 138 ~g~i 141 (331)
T 4hkt_A 138 DGRI 141 (331)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 95
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=85.43 E-value=0.87 Score=28.09 Aligned_cols=34 Identities=21% Similarity=0.130 Sum_probs=24.7
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.... +..++.+.++|++||.++.-..
T Consensus 135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 135 PAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 379998832222 3358889999999999987654
No 96
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=84.98 E-value=0.82 Score=28.45 Aligned_cols=34 Identities=12% Similarity=0.009 Sum_probs=27.5
Q ss_pred CCCcEEEEccCCh-HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+.....+ ..+..+.++|+++|+++++..
T Consensus 170 ~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 170 GSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4689888766665 568899999999999998753
No 97
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=84.85 E-value=0.8 Score=28.02 Aligned_cols=34 Identities=12% Similarity=-0.195 Sum_probs=27.8
Q ss_pred CCCcEEEEccCCh-HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+...+.+ ..+..+.++|+++|+++++..
T Consensus 165 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 165 AAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4689988766665 568899999999999998853
No 98
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=84.81 E-value=1 Score=29.63 Aligned_cols=36 Identities=31% Similarity=0.508 Sum_probs=29.8
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.|+|++++|+|.-...+.+-..++.|.+.|++..+.
T Consensus 90 ~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps 125 (338)
T 3lvf_P 90 LNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 125 (338)
T ss_dssp TTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred cCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCC
Confidence 389999999998776888889999888777776554
No 99
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=84.80 E-value=2 Score=28.02 Aligned_cols=72 Identities=14% Similarity=0.119 Sum_probs=46.3
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+.|++.....+.+..+++.| .-|.+- .|...+.. .+ -.+++.+.-.+.. ...+..+.+++
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 138 (359)
T 3e18_A 63 DEKVDAVLIATPNDSHKELAISALEAG-KHVVCE---KPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMF 138 (359)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEE---SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHH
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEee---CCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHH
Confidence 357999999999988788888888865 444442 22223322 22 1234444333222 67889999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
++|.+
T Consensus 139 ~~g~i 143 (359)
T 3e18_A 139 EQKTI 143 (359)
T ss_dssp HHTTT
T ss_pred HcCCC
Confidence 99987
No 100
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=84.66 E-value=0.35 Score=29.16 Aligned_cols=33 Identities=12% Similarity=-0.024 Sum_probs=27.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+........+..+.+.|+++|++++.-
T Consensus 161 ~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 161 GLFDAIHVGASASELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp CCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 468999887766666788999999999988764
No 101
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=84.64 E-value=2.7 Score=25.06 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=24.5
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.... +..+..+.++|++||.++.-..
T Consensus 132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 469988843322 3357888999999998887643
No 102
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=84.59 E-value=0.74 Score=30.13 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.++|+||+|+|.....+.+-.+++.|.+.+.+..+.
T Consensus 90 ~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~ 125 (335)
T 1u8f_O 90 AGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS 125 (335)
T ss_dssp TTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred CCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCC
Confidence 479999999999887888888888877888887654
No 103
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=84.58 E-value=5.6 Score=25.40 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=44.8
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| +-+.+-- |...+.. .+ -.+++.+.-.... ...+..+.+++.
T Consensus 61 ~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (332)
T 2glx_A 61 PDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEK---PLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIA 136 (332)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHH
T ss_pred CCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHH
Confidence 46999999999887677788888764 5455432 2222322 22 1234444333222 667899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 137 ~g~i 140 (332)
T 2glx_A 137 EGRI 140 (332)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 104
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=84.37 E-value=2.1 Score=27.82 Aligned_cols=72 Identities=13% Similarity=0.112 Sum_probs=46.0
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+.|++.....+.+..+++.|-. +.+-- |...+.. .+ -.+++.+.-.+.. ...+.++.+++
T Consensus 64 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EK---P~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i 139 (354)
T 3db2_A 64 REDVEMVIITVPNDKHAEVIEQCARSGKH-IYVEK---PISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMI 139 (354)
T ss_dssp CSSCCEEEECSCTTSHHHHHHHHHHTTCE-EEEES---SSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHH
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHHcCCE-EEEcc---CCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHH
Confidence 35799999999998877888888877644 44422 2222222 22 1234444333332 77889999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|.+
T Consensus 140 ~~g~i 144 (354)
T 3db2_A 140 DTKEI 144 (354)
T ss_dssp HTTTT
T ss_pred hcCCC
Confidence 99988
No 105
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=84.18 E-value=2.1 Score=27.54 Aligned_cols=72 Identities=14% Similarity=0.056 Sum_probs=46.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.|-. +.+-- |...+.. .+ -.+++.+.-.+.. ...+.++.+++.
T Consensus 66 ~~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 141 (330)
T 3e9m_A 66 ETIDIIYIPTYNQGHYSAAKLALSQGKP-VLLEK---PFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQ 141 (330)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHHHTTCC-EEECS---SCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHHCCCe-EEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHh
Confidence 4799999999998877888888877643 44422 2222222 22 2244444333332 678899999999
Q ss_pred cCCCC
Q 040104 86 SGKID 90 (105)
Q Consensus 86 ~g~i~ 90 (105)
+|.+.
T Consensus 142 ~g~iG 146 (330)
T 3e9m_A 142 EGGLG 146 (330)
T ss_dssp TTTTC
T ss_pred CCCCC
Confidence 99873
No 106
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=84.06 E-value=0.36 Score=28.83 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=26.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+.+.+.....+.+.++|+++|++++.-
T Consensus 145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence 468999987665554578899999999998763
No 107
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=84.03 E-value=6.6 Score=25.42 Aligned_cols=71 Identities=17% Similarity=0.165 Sum_probs=46.7
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| +-|.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.++++
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 139 (349)
T 3i23_A 64 PEIELITICTPAHTHYDLAKQAILAG-KSVIVE---KPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVE 139 (349)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEE---CCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHh
Confidence 47999999999988788888888866 445542 23333322 22 2244544433332 677899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 140 ~g~i 143 (349)
T 3i23_A 140 QGFL 143 (349)
T ss_dssp HTTT
T ss_pred cCCC
Confidence 9987
No 108
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=83.69 E-value=6.3 Score=25.53 Aligned_cols=71 Identities=20% Similarity=0.175 Sum_probs=46.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++...+.+.+..+++.| +-|.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.+++.
T Consensus 66 ~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~E---KPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 141 (352)
T 3kux_A 66 PSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVD---KPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLA 141 (352)
T ss_dssp SSCCEEEECSCTTTHHHHHHHHHHTT-CEEEEC---SSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEE---CCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHh
Confidence 57999999999888788888888776 445553 22223322 22 1234444433332 677889999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 142 ~g~i 145 (352)
T 3kux_A 142 EGSL 145 (352)
T ss_dssp HTTT
T ss_pred cCCC
Confidence 9987
No 109
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=83.58 E-value=0.93 Score=29.68 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=29.5
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
++|+||+|+|.....+.+-..++.|.+.+.++.+.
T Consensus 88 ~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 88 GVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred cCCEEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 79999999998777888888888888888887654
No 110
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=83.50 E-value=1 Score=27.47 Aligned_cols=33 Identities=21% Similarity=0.196 Sum_probs=26.0
Q ss_pred CCCcEEEEccCCh---HHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+...+.. ..+..+.++|++||+++.-.
T Consensus 146 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 146 SSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 5799998765544 35788999999999999864
No 111
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=83.39 E-value=1 Score=29.60 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=29.1
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
|+|++++|+|.-...+.+-..++.|.+.|++..+.
T Consensus 91 gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps 125 (335)
T 3doc_A 91 NVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPA 125 (335)
T ss_dssp TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCC
Confidence 89999999998777888888999888777776554
No 112
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=83.26 E-value=1.1 Score=29.78 Aligned_cols=35 Identities=14% Similarity=0.331 Sum_probs=29.2
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
|+|++++|+|.-...+.+-..++.|.+.|++..+.
T Consensus 103 gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps 137 (359)
T 3ids_C 103 GVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPA 137 (359)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCC
T ss_pred CccEEEEeccccCCHHHHHHHHHcCCCEEEECCCC
Confidence 89999999998776888888999888777776554
No 113
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=83.26 E-value=1.2 Score=28.83 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=26.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhc--CCEEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRA--GGKVCL 45 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~--~G~~v~ 45 (105)
.++|+||+|+|...+.+.+..+++. |..++.
T Consensus 70 ~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~ 102 (312)
T 1nvm_B 70 ADIDFVFDATSASAHVQNEALLRQAKPGIRLID 102 (312)
T ss_dssp GGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCcEEEECCChHHHHHHHHHHHHhCCCCEEEE
Confidence 4799999999987778888888888 777766
No 114
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=83.08 E-value=1.3 Score=26.33 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=22.9
Q ss_pred CCCcEEEE-----ccCCh------------HHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFD-----CAGFN------------KTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+- +.|.. ..+..+.++|+|||+++.-
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 47999884 23431 2466788999999999864
No 115
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=83.02 E-value=1.1 Score=28.00 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=27.3
Q ss_pred CCCcEEEEccCCh-HHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-..+.+ ..+..+.++|+++|+++...
T Consensus 180 ~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 180 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 3689988776665 56889999999999999875
No 116
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=82.82 E-value=1.2 Score=27.20 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=27.5
Q ss_pred CCCcEEEEccCChH-HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK-TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-..+.+. .+..+.++|+++|+++++..
T Consensus 161 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 161 ENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 35899887776653 68999999999999998753
No 117
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=82.78 E-value=1.3 Score=25.54 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=24.6
Q ss_pred CCCcEEEEcc-------CChHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCA-------GFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-+. .-...+.++.++|+|||++++.
T Consensus 62 ~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 62 SSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp SCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 4689988631 2244688999999999999985
No 118
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=82.29 E-value=1.3 Score=25.94 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=26.4
Q ss_pred CCCCcEEEEccCC---------------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 14 GTGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 14 ~~g~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++.+|+|+-..+- ...+..+.++|+++|+++....
T Consensus 91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 3568988865432 2458899999999999998753
No 119
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=81.96 E-value=1.2 Score=29.42 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=28.4
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH 51 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 51 (105)
|+|+|++|+|.....+.+-..++.|...+++..+..
T Consensus 89 gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~ 124 (342)
T 2ep7_A 89 GVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK 124 (342)
T ss_dssp TCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB
T ss_pred CCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC
Confidence 899999999987767888888888876666665543
No 120
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=81.84 E-value=0.36 Score=28.72 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=25.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+...+-........+.|++||+++..
T Consensus 142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLP 173 (210)
T ss_dssp CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred CCccEEEEccchhhhhHHHHHhcccCcEEEEE
Confidence 46899998665555456789999999998876
No 121
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=81.79 E-value=1.6 Score=29.24 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=28.2
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
++|+||+|+|.....+.+-..++.|..-|++..+.
T Consensus 91 gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps 125 (380)
T 2d2i_A 91 DIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPG 125 (380)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCC
Confidence 79999999998776788888888887766665543
No 122
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=81.75 E-value=0.5 Score=28.56 Aligned_cols=32 Identities=13% Similarity=0.144 Sum_probs=26.4
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+...+.........+.|+++|++++.
T Consensus 162 ~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 162 APYNAIHVGAAAPDTPTELINQLASGGRLIVP 193 (227)
T ss_dssp CSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred CCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence 46899988776666678899999999998875
No 123
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=81.64 E-value=2.5 Score=27.25 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=45.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.|- -+.+-- |...+.. .+ -.+++.+.-.+.. ...+..+.+++.
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 139 (344)
T 3euw_A 64 DDIDGIVIGSPTSTHVDLITRAVERGI-PALCEK---PIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVA 139 (344)
T ss_dssp SCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECS---CSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEEC---CCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHh
Confidence 479999999999887777888877664 344432 2222222 12 1233433333322 678899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 140 ~g~i 143 (344)
T 3euw_A 140 NQEI 143 (344)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 124
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=81.64 E-value=0.37 Score=27.11 Aligned_cols=34 Identities=12% Similarity=0.035 Sum_probs=25.9
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
++|++|.|++.+..+.. ...+++++.++.+|.+.
T Consensus 80 ~~Divi~at~~~~~~~~-~~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 80 NNDVIITATSSKTPIVE-ERSLMPGKLFIDLGNPP 113 (144)
T ss_dssp TCSEEEECSCCSSCSBC-GGGCCTTCEEEECCSSC
T ss_pred CCCEEEEeCCCCCcEee-HHHcCCCCEEEEccCCc
Confidence 58999999998653222 37788999999998754
No 125
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=81.60 E-value=4.4 Score=26.01 Aligned_cols=71 Identities=20% Similarity=0.153 Sum_probs=45.4
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.|- -+.+-- |...+.. .+ -.++..+.-.+.. ...+..+.+++.
T Consensus 66 ~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~ 141 (329)
T 3evn_A 66 ESIDVIYVATINQDHYKVAKAALLAGK-HVLVEK---PFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLA 141 (329)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEES---SCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHH
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEcc---CCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHh
Confidence 479999999998887777888877664 444432 2222222 22 2244444333332 677889999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 142 ~g~i 145 (329)
T 3evn_A 142 SGEI 145 (329)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 9987
No 126
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=81.54 E-value=2.7 Score=27.41 Aligned_cols=71 Identities=15% Similarity=0.054 Sum_probs=46.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| +-|.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.+++.
T Consensus 64 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 139 (362)
T 3fhl_A 64 PEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVE---KPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILA 139 (362)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEE---SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEe---cCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHH
Confidence 47999999999988788888888775 444442 22223322 22 1234444433332 678899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 140 ~G~i 143 (362)
T 3fhl_A 140 KSLL 143 (362)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 127
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=81.47 E-value=0.52 Score=28.38 Aligned_cols=33 Identities=15% Similarity=0.121 Sum_probs=26.4
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+........+..+.++|++||+++..-
T Consensus 150 ~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 150 APYDAIHVGAAAPVVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 368988876666666789999999999998763
No 128
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=81.31 E-value=1.6 Score=26.48 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=25.2
Q ss_pred CCCcEEEEccCCh---H-HHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFN---K-TMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~---~-~~~~~~~~l~~~G~~v~~ 46 (105)
..+|+|+..+..+ . .+..+.+.|+++|++++.
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 4689988666555 3 378888999999999986
No 129
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=81.01 E-value=1.1 Score=29.64 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=29.5
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.|+|++++|+|.-...+.+-..++.|.+.|++..+.
T Consensus 90 ~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps 125 (345)
T 4dib_A 90 LGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPG 125 (345)
T ss_dssp TTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred cCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCC
Confidence 389999999998776888888999888777776554
No 130
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=80.92 E-value=1.7 Score=28.59 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=27.6
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.|+|++++|+|.-...+.+-..++.|...+++..+.
T Consensus 90 ~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps 125 (335)
T 1obf_O 90 LKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (335)
T ss_dssp TTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred cCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcc
Confidence 389999999998766788888888887656665443
No 131
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=80.81 E-value=1.8 Score=28.43 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=27.7
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
++|+||+|+|.....+.+-..++.|..-|++..+.
T Consensus 91 ~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~ 125 (339)
T 3b1j_A 91 DIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPG 125 (339)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCC
Confidence 89999999998776788888888887766665443
No 132
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=80.49 E-value=0.83 Score=27.66 Aligned_cols=33 Identities=21% Similarity=0.134 Sum_probs=25.4
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+...+. ...+..+.++|++||+++...
T Consensus 125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 478988865543 345788899999999998863
No 133
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=80.00 E-value=9.8 Score=24.64 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=48.2
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchh---h----hhcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP---A----AAREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+-|++.....+.+..+|+. |.-|.+ ..|...+... + -.+++.+.-.+.. ...+.++.+++
T Consensus 92 ~~~iDaV~IatP~~~H~~~a~~al~a-GkhVl~---EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i 167 (393)
T 4fb5_A 92 DPEVDVVSVTTPNQFHAEMAIAALEA-GKHVWC---EKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLV 167 (393)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHT-TCEEEE---CSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHH
T ss_pred CCCCcEEEECCChHHHHHHHHHHHhc-CCeEEE---ccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHH
Confidence 35799999999998878888888876 555555 2333344332 2 1244444333333 77889999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|++
T Consensus 168 ~~G~i 172 (393)
T 4fb5_A 168 GDGVI 172 (393)
T ss_dssp HTTTT
T ss_pred HcCCC
Confidence 99988
No 134
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=79.80 E-value=2.1 Score=27.92 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=26.6
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|+||+|+|.....+.+-.+++.|.+++..+.
T Consensus 61 ~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~ 93 (331)
T 2yv3_A 61 PVDLVLASAGGGISRAKALVWAEGGALVVDNSS 93 (331)
T ss_dssp CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCCEEEECCCccchHHHHHHHHHCCCEEEECCC
Confidence 689999999987767777777787777777764
No 135
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=79.68 E-value=0.59 Score=28.43 Aligned_cols=32 Identities=25% Similarity=0.261 Sum_probs=25.4
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
++|+|+.+.+.........+.|++||++++.-
T Consensus 158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence 48999987666555678899999999988753
No 136
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=79.24 E-value=3.7 Score=26.76 Aligned_cols=71 Identities=13% Similarity=0.168 Sum_probs=45.8
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| +-|.+- .|...+.. .+ -.+++.+.-.+.. ...+..+.+++.
T Consensus 64 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~E---KPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 139 (358)
T 3gdo_A 64 PAIELVIVTTPSGLHYEHTMACIQAG-KHVVME---KPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLIS 139 (358)
T ss_dssp TTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEE---SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEe---cCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHh
Confidence 47999999999988788888888776 444442 22223322 22 1234444333332 678889999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 140 ~g~i 143 (358)
T 3gdo_A 140 EGSL 143 (358)
T ss_dssp TTSS
T ss_pred cCCC
Confidence 9987
No 137
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=79.09 E-value=2.2 Score=25.59 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=24.5
Q ss_pred CCCcEEEEccCChH---H-HHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNK---T-MSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~---~-~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-....+. . +..+.++|++||++++.
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 46898886554432 2 78899999999999887
No 138
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=78.95 E-value=1.8 Score=26.35 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=24.2
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+||-.... ...++.+.++|++||.++.-.
T Consensus 147 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 147 PEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp CCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 579988843222 235788999999999998854
No 139
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=78.77 E-value=12 Score=25.23 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=46.7
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCC-----EEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGG-----KVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLC 80 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G-----~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~ 80 (105)
..+|+|+.|++.....+.+..+++.|. +-|.+-- |...+.. .+ -.+++.+.-.+.. ...+.++
T Consensus 88 ~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~ 164 (438)
T 3btv_A 88 STIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEW---ALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRA 164 (438)
T ss_dssp SSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEES---SCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHH
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecC---cccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHH
Confidence 479999999998887888888888762 4455432 2222222 22 1244444433333 6778899
Q ss_pred HHHHHcCCC
Q 040104 81 LEFLRSGKI 89 (105)
Q Consensus 81 ~~~v~~g~i 89 (105)
.+++.+|.|
T Consensus 165 k~~i~~G~i 173 (438)
T 3btv_A 165 KELISQGYI 173 (438)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHcCCC
Confidence 999999987
No 140
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=78.32 E-value=0.78 Score=27.71 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=27.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+....-...+..+.++|+|||+++..+.
T Consensus 110 ~~fD~v~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (226)
T 3m33_A 110 APFGLIVSRRGPTSVILRLPELAAPDAHFLYVGP 143 (226)
T ss_dssp CCEEEEEEESCCSGGGGGHHHHEEEEEEEEEEES
T ss_pred CCEEEEEeCCCHHHHHHHHHHHcCCCcEEEEeCC
Confidence 4689988776556678899999999999995543
No 141
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=78.22 E-value=3.4 Score=26.82 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=45.4
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|+......+.+..+++.| .-+.+-- |...+.. .+ -.++..+.-.+.. ...+.++.++++
T Consensus 74 ~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EK---P~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 149 (354)
T 3q2i_A 74 TDADIVILTTPSGLHPTQSIECSEAG-FHVMTEK---PMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQ 149 (354)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeC---CCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHh
Confidence 47999999999888777788888765 4445432 2222222 22 2234444322222 668899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 150 ~g~i 153 (354)
T 3q2i_A 150 EKRF 153 (354)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 142
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=78.08 E-value=3.2 Score=27.71 Aligned_cols=35 Identities=6% Similarity=0.141 Sum_probs=24.5
Q ss_pred CCcEEEEccCChHHHH--HHHHh--h--hcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMS--TALSA--T--RAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~~ 50 (105)
++|+||+|+|.+..+. ..+.. + +++|.+++++...
T Consensus 227 ~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 227 RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 6999999998765332 45555 4 5678888887643
No 143
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=77.88 E-value=3.5 Score=24.04 Aligned_cols=18 Identities=11% Similarity=0.021 Sum_probs=14.8
Q ss_pred HHHHHHHhhhcCCEEEEE
Q 040104 29 TMSTALSATRAGGKVCLV 46 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~ 46 (105)
.+..+.++|++||+++..
T Consensus 136 ~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 136 ITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHccCCCEEEEE
Confidence 356788999999999874
No 144
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=77.66 E-value=1.5 Score=26.65 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=24.7
Q ss_pred CCCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+||-.... ...++.+.++|++||.++.-.
T Consensus 127 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 127 NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 3579988754332 224788999999999999854
No 145
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=77.45 E-value=2.3 Score=25.47 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=25.2
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.... ...+..+.++|++||.++....
T Consensus 144 ~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 144 GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp TCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 579988754333 2358889999999999988643
No 146
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=77.43 E-value=12 Score=24.35 Aligned_cols=71 Identities=13% Similarity=0.124 Sum_probs=46.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| +-|.+- .|...+.. .+ -.++..+.-.+.. ...+.++.+++.
T Consensus 66 ~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~E---KPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 141 (364)
T 3e82_A 66 PDVDLVVIASPNATHAPLARLALNAG-KHVVVD---KPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIE 141 (364)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEe---CCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHH
Confidence 47999999999988788888888775 445552 23333332 22 1244444333322 567889999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 142 ~g~i 145 (364)
T 3e82_A 142 QGTL 145 (364)
T ss_dssp HTTT
T ss_pred cCCC
Confidence 9987
No 147
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=76.96 E-value=2.2 Score=27.94 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=26.4
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|+||+|+|.....+.+-.+++.|-.-+++..+
T Consensus 93 ~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 93 GAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEEEecC
Confidence 7999999999988788888888887744455444
No 148
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=76.52 E-value=4.6 Score=25.56 Aligned_cols=34 Identities=12% Similarity=0.211 Sum_probs=25.6
Q ss_pred CCCcEEEEc-----cCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+.. .+. ...+..+.++|+|||++++...
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 468998875 432 3357888999999999998754
No 149
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=76.45 E-value=2.4 Score=28.03 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=26.1
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
|+|+||+|+|.-...+.+-..++.|..-+++..+.
T Consensus 99 gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps 133 (345)
T 2b4r_O 99 QVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP 133 (345)
T ss_dssp TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCCEEEECcCccccHhhHHHHHHCCCCEEEECCCC
Confidence 89999999997666777778888776555555443
No 150
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=76.25 E-value=1.4 Score=25.55 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=24.4
Q ss_pred CCCCcEEEEccCC-----------h----HHHHHHHHhhhcCCEEEEEcCC
Q 040104 14 GTGIDVSFDCAGF-----------N----KTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 14 ~~g~d~vid~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++.+|+|+-..+. + ..+..+.+.|+|||+++++..+
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3468888755321 1 2357888999999999987543
No 151
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=76.15 E-value=2.5 Score=25.90 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=24.9
Q ss_pred CCCcEEEEccCC------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+....- ...+.++.++|+|||++++..
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 468888865322 246889999999999999864
No 152
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=75.68 E-value=4.5 Score=26.53 Aligned_cols=34 Identities=3% Similarity=-0.194 Sum_probs=26.8
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.++|+||.|+|.....+.+-.+++.|.+++..+.
T Consensus 67 ~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 67 EPADILVLALPHGVFAREFDRYSALAPVLVDLSA 100 (345)
T ss_dssp CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSS
T ss_pred cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCc
Confidence 4799999999988766767777777777777654
No 153
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=75.63 E-value=1.9 Score=28.22 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=26.8
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
++|+||+|+|.....+.+-..++.|.+-+++..+.
T Consensus 86 gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps 120 (331)
T 2g82_O 86 GVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (331)
T ss_dssp TEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred CCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCC
Confidence 79999999998776777888888776445555544
No 154
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=75.58 E-value=0.99 Score=27.16 Aligned_cols=33 Identities=15% Similarity=0.069 Sum_probs=25.6
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+....-......+.+.|++||+++..-
T Consensus 133 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence 468988876555454578899999999998774
No 155
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=75.42 E-value=4 Score=26.72 Aligned_cols=34 Identities=9% Similarity=-0.074 Sum_probs=27.0
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|+||+|+|.....+.+-.+++.|-..+..+.+
T Consensus 77 ~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred CCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCC
Confidence 5899999999887666776777777778887754
No 156
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=75.33 E-value=3.8 Score=26.77 Aligned_cols=33 Identities=21% Similarity=0.039 Sum_probs=25.6
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|+||+|+|.....+.+-.+++.|.+++..+.
T Consensus 65 ~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~ 97 (336)
T 2r00_A 65 QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTS 97 (336)
T ss_dssp GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCC
Confidence 799999999987766667777777777666654
No 157
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=75.25 E-value=1.7 Score=25.60 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=17.6
Q ss_pred HHHHHHHHhhhcCCEEEEEcC
Q 040104 28 KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+..+.++|+++|++++...
T Consensus 140 ~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 140 QVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHhCcCCCEEEEEeC
Confidence 457888999999999998864
No 158
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=74.78 E-value=2.8 Score=26.00 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=23.2
Q ss_pred CCCcEEEEccCChH----HHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~ 46 (105)
..+|+|+.....+. .+.++...|+|||++++.
T Consensus 146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 146 EGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 35787776554432 477788999999998875
No 159
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=74.36 E-value=5 Score=26.64 Aligned_cols=34 Identities=26% Similarity=0.240 Sum_probs=26.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.++|++|+|+|.....+.+-.++..|.+++..+.
T Consensus 63 ~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa 96 (366)
T 3pwk_A 63 EGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTS 96 (366)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred cCCCEEEECCChHhHHHHHHHHHHCCCEEEEcCC
Confidence 4799999999987766666667777777777764
No 160
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=73.92 E-value=15 Score=23.62 Aligned_cols=71 Identities=14% Similarity=0.234 Sum_probs=45.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.|- -+.+-- |...+.. .+ -.+++.+.-.+.. ...+..+.+++.
T Consensus 63 ~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 138 (344)
T 3ezy_A 63 PNVDAVLVCSSTNTHSELVIACAKAKK-HVFCEK---PLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVE 138 (344)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEES---CSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcchHHHHHHHHhcCC-eEEEEC---CCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHH
Confidence 479999999999887777888877664 444432 2222222 22 1234444333332 778899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 139 ~G~i 142 (344)
T 3ezy_A 139 NGTI 142 (344)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 161
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=73.54 E-value=4.3 Score=25.54 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=24.6
Q ss_pred CCCCcEEEEccC----------ChHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+-... ....+..+.++|+++|.++.-.
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 457998774332 1345788999999999998863
No 162
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=73.21 E-value=2.7 Score=26.24 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=25.4
Q ss_pred CCCcEEEEccC-----ChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----FNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-+.. .+..+.++.++|+|||++++++.
T Consensus 98 ~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 98 ASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp SCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence 46888876422 13468899999999999988764
No 163
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=72.99 E-value=4 Score=24.76 Aligned_cols=31 Identities=10% Similarity=-0.143 Sum_probs=22.0
Q ss_pred CCCcEEE-EccCChHHHHHHHHhhhcCCEEEE
Q 040104 15 TGIDVSF-DCAGFNKTMSTALSATRAGGKVCL 45 (105)
Q Consensus 15 ~g~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~ 45 (105)
+.+|+|| |.--...-+..++..|++||+++.
T Consensus 121 ~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 121 RHPDVVLVDGRFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp CCCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence 4699877 643223347778999999999854
No 164
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=72.93 E-value=6.9 Score=23.98 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=24.3
Q ss_pred CCCcEEEEccCCh---HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+||-..... ..++.+.++|++||.++.-..
T Consensus 135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 135 HQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp SCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 5799877433322 247789999999999998543
No 165
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=72.89 E-value=3.4 Score=24.79 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=23.6
Q ss_pred CCCcEEEEccCChH----HHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-.+..+. .+.++.+.|+|||+++..
T Consensus 125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 35788886554332 257788999999999987
No 166
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=72.81 E-value=5.5 Score=24.72 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=24.8
Q ss_pred CCCcEEEEc-----cCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+.. .+. ...+..+.++|+|||++++...
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 458988864 321 3458889999999999998653
No 167
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=72.66 E-value=15 Score=23.60 Aligned_cols=71 Identities=20% Similarity=0.250 Sum_probs=45.8
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| .-|.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.+++.
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 139 (345)
T 3f4l_A 64 PDVKLVVVCTHADSHFEYAKRALEAG-KNVLVE---KPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIE 139 (345)
T ss_dssp TTEEEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHHh
Confidence 47999999999988788888888776 444442 23333322 22 1234444323322 678889999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 140 ~g~i 143 (345)
T 3f4l_A 140 SGKL 143 (345)
T ss_dssp HSTT
T ss_pred cCCC
Confidence 9987
No 168
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=72.53 E-value=7.1 Score=26.08 Aligned_cols=71 Identities=15% Similarity=0.136 Sum_probs=45.7
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+-|++.....+.+..+++.| .-|.+-- |...+.. .+ -.++..+.-.+.. ...+.++.++++
T Consensus 109 ~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 184 (417)
T 3v5n_A 109 NGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDK---PLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIE 184 (417)
T ss_dssp TCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEES---SSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHh
Confidence 46999999999888777788887765 5455532 2223322 22 1234444333332 678899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.|
T Consensus 185 ~G~i 188 (417)
T 3v5n_A 185 NGDI 188 (417)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 169
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=72.53 E-value=5.1 Score=26.41 Aligned_cols=72 Identities=11% Similarity=0.100 Sum_probs=45.7
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|+....+.+.+..+++.| .-|.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.++++
T Consensus 63 ~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 138 (387)
T 3moi_A 63 VQMDAVYIASPHQFHCEHVVQASEQG-LHIIVE---KPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQ 138 (387)
T ss_dssp SCCSEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHH
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCC-Cceeee---CCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHh
Confidence 46999999999988778888888776 444443 22222222 22 1234444322222 677889999999
Q ss_pred cCCCC
Q 040104 86 SGKID 90 (105)
Q Consensus 86 ~g~i~ 90 (105)
+|.|-
T Consensus 139 ~g~iG 143 (387)
T 3moi_A 139 EGSVG 143 (387)
T ss_dssp HCTTC
T ss_pred cCCCC
Confidence 99873
No 170
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=72.51 E-value=16 Score=23.42 Aligned_cols=72 Identities=15% Similarity=0.234 Sum_probs=47.4
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hhh----hcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PAA----AREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~----~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+-|++.....+.+..+|+. |+-|.+= .|...+.. .+. .+++.+.-.+.. ...+.++.+++
T Consensus 84 ~~~iDaV~I~tP~~~H~~~~~~al~a-GkhVl~E---KPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i 159 (350)
T 4had_A 84 SDVIDAVYIPLPTSQHIEWSIKAADA-GKHVVCE---KPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLI 159 (350)
T ss_dssp CSSCSEEEECSCGGGHHHHHHHHHHT-TCEEEEC---SCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHhc-CCEEEEe---CCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhh
Confidence 35799999999998878888888876 5556653 23333332 221 234444333332 77889999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|.|
T Consensus 160 ~~G~i 164 (350)
T 4had_A 160 DEGAI 164 (350)
T ss_dssp HTTTT
T ss_pred hcCCC
Confidence 99987
No 171
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=72.16 E-value=7.1 Score=25.82 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=27.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.++|++|.|+|.....+.+-.++..|-+++..+.
T Consensus 78 ~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa 111 (359)
T 4dpl_A 78 DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSP 111 (359)
T ss_dssp TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSS
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCC
Confidence 3799999999998766666677777888888765
No 172
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=72.16 E-value=7.1 Score=25.82 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=27.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.++|++|.|+|.....+.+-.++..|-+++..+.
T Consensus 78 ~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa 111 (359)
T 4dpk_A 78 DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSP 111 (359)
T ss_dssp TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSS
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCC
Confidence 3799999999998766666677777888888765
No 173
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=72.03 E-value=9.1 Score=23.27 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=22.5
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCL 45 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 45 (105)
.++|+|++|++.....+.+..+++.|-.++.
T Consensus 49 ~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~ 79 (236)
T 2dc1_A 49 REMDVAVEAASQQAVKDYAEKILKAGIDLIV 79 (236)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCcEEE
Confidence 4789999999988766667777766544443
No 174
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=71.95 E-value=6.4 Score=25.39 Aligned_cols=71 Identities=17% Similarity=0.126 Sum_probs=45.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEE--EEeecc-CCCHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDV--VGVFRY-KNTWPLCLEFL 84 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i--~~~~~~-~~~~~~~~~~v 84 (105)
..+|+|+.|++.....+.+..+++.| +-+.+- .|...+.. .+ -.++..+ .+.... ...+.++.+++
T Consensus 65 ~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i 140 (344)
T 3mz0_A 65 ENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCE---KPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEAL 140 (344)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHH
T ss_pred CCCCEEEECCCchhHHHHHHHHHHCC-CcEEEc---CCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHH
Confidence 46999999999888777788777766 444442 23333322 22 1234433 233222 77889999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|.+
T Consensus 141 ~~g~i 145 (344)
T 3mz0_A 141 DNHVI 145 (344)
T ss_dssp HTTTT
T ss_pred HcCCC
Confidence 99987
No 175
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=71.89 E-value=3.7 Score=24.13 Aligned_cols=35 Identities=23% Similarity=0.154 Sum_probs=25.6
Q ss_pred CCCcEEEEcc-----CC---hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 15 TGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
+.+|+|+-.. .. ...+..+.++|++||++++....
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 4688888642 22 34578889999999999988643
No 176
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=71.56 E-value=4.1 Score=26.57 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=24.5
Q ss_pred CCCCcEEEE-cc---C------ChHHHHHHHHhhhcCCEEEEE
Q 040104 14 GTGIDVSFD-CA---G------FNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 14 ~~g~d~vid-~~---g------~~~~~~~~~~~l~~~G~~v~~ 46 (105)
.+.+|+|+- .. + ....+..+.++|+++|.++.-
T Consensus 192 ~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 192 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 357998884 32 1 234588899999999999986
No 177
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=71.46 E-value=6.3 Score=23.12 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=24.9
Q ss_pred EEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 19 VSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 19 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
++++.+|.+.-++..+++|+|.|.+..+.
T Consensus 121 ~~ie~tg~~~ki~~~~~~l~~~g~i~e~~ 149 (164)
T 2f1f_A 121 YTVQLAGTSGKLDAFLASIRDVAKIVEVA 149 (164)
T ss_dssp EEEEEEECHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCEEEEE
Confidence 58899999999999999999999655553
No 178
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=71.40 E-value=9.3 Score=25.71 Aligned_cols=76 Identities=17% Similarity=0.266 Sum_probs=46.7
Q ss_pred HHHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeec--cCCCHHH
Q 040104 10 DKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFR--YKNTWPL 79 (105)
Q Consensus 10 ~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~--~~~~~~~ 79 (105)
.++. ...+|+|+.|++.....+.+..+++.| +-|.+- .|...+.. .+ -.+++.+.-... +...+..
T Consensus 84 ~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aG-khV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~ 159 (444)
T 2ixa_A 84 KNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAG-KIVGME---VSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMA 159 (444)
T ss_dssp HHHTTCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHH
T ss_pred HHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHH
Confidence 3444 347999999999888788888888765 445543 22222222 22 123434332222 2567888
Q ss_pred HHHHHHcCCC
Q 040104 80 CLEFLRSGKI 89 (105)
Q Consensus 80 ~~~~v~~g~i 89 (105)
+.+++.+|.+
T Consensus 160 ~~~~i~~G~i 169 (444)
T 2ixa_A 160 ILNMVRKGMF 169 (444)
T ss_dssp HHHHHHTTTT
T ss_pred HHHHHHcCCC
Confidence 9999999987
No 179
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=71.35 E-value=3.3 Score=25.83 Aligned_cols=34 Identities=9% Similarity=-0.070 Sum_probs=26.5
Q ss_pred CCCcEEEEccCCh-HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-....+ ..+..+.++|+++|+++....
T Consensus 178 ~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 178 QMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3589888766554 458889999999999998753
No 180
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=71.27 E-value=8 Score=24.47 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=34.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVV 68 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 68 (105)
...|+++.+++....-...+..+++++.++.++..+....+ ......++.+.
T Consensus 212 ~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~ 263 (293)
T 3d4o_A 212 RDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL 263 (293)
T ss_dssp TTCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred cCCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence 46899999987644234678889999999999853333333 33333455543
No 181
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=71.22 E-value=8.5 Score=23.59 Aligned_cols=17 Identities=18% Similarity=0.302 Sum_probs=11.8
Q ss_pred HHHHhhhcCCEEEEEcC
Q 040104 32 TALSATRAGGKVCLVGM 48 (105)
Q Consensus 32 ~~~~~l~~~G~~v~~g~ 48 (105)
.++..++++|+++.++.
T Consensus 132 ~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 132 AARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHGGGCTTCEEEEEEEC
T ss_pred HHHhhcCCCceEEEEec
Confidence 34445566899999875
No 182
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=71.17 E-value=10 Score=23.33 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=24.2
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+||-.... ...++.+.++|++||.++.-.
T Consensus 155 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 579988843322 335788999999999998753
No 183
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=70.80 E-value=1.8 Score=29.49 Aligned_cols=46 Identities=13% Similarity=0.224 Sum_probs=33.2
Q ss_pred CCcEEEEccCChHHHH-HHHHhhhcCCEEEEEcCCCCCccccchhhhhc
Q 040104 16 GIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHHEMTVPLTPAAAR 63 (105)
Q Consensus 16 g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 63 (105)
..|+++.+.+....+. +.+..+++++.++.+|.. +..++...+..+
T Consensus 266 ~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg--~vEID~~~L~~~ 312 (436)
T 3h9u_A 266 EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHF--DTEIQVAWLKAN 312 (436)
T ss_dssp TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSS--GGGBCHHHHHHH
T ss_pred hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCC--CCccCHHHHHhh
Confidence 6899999888766454 678889999999999743 344555555443
No 184
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=70.79 E-value=18 Score=23.24 Aligned_cols=71 Identities=18% Similarity=0.163 Sum_probs=46.5
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| +-|.+- .|...+.. .+ -.++..+.-.+.. ...+..+.++++
T Consensus 80 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 155 (330)
T 4ew6_A 80 PSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLE---KPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAAKAFLA 155 (330)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTT-CEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHHHHHHH
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEe---CCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHHHHHHh
Confidence 46999999999888777788888776 555543 22223322 22 1234444333333 788999999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.|
T Consensus 156 ~g~i 159 (330)
T 4ew6_A 156 STTI 159 (330)
T ss_dssp SSCE
T ss_pred cCCc
Confidence 9977
No 185
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=70.77 E-value=5.5 Score=26.01 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=23.8
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
++|+||+|+|.....+.+-.+++.|-.++..+
T Consensus 78 ~vDvV~~atp~~~~~~~a~~~l~aG~~VId~s 109 (337)
T 1cf2_P 78 EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQG 109 (337)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCCEEECT
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCEEEEec
Confidence 69999999998876777777777765544433
No 186
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=70.61 E-value=4.7 Score=24.00 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=24.7
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.... ...+..+.++|++||.++.-..
T Consensus 139 ~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 139 WQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp TCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 579988843332 2347888999999999987643
No 187
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=70.44 E-value=3.5 Score=26.14 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=25.4
Q ss_pred CCCcEEEEc-----cCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDC-----AGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+.. .+-...+..+.++|+|||++++...
T Consensus 184 ~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 184 GAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 468888753 2334568899999999999998763
No 188
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=70.16 E-value=21 Score=23.59 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=46.6
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+-|++.....+.+..+++.| .-|.+ ..|...+.. .+ -.+++.+.-.+.. ...+.++.++++
T Consensus 84 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 159 (398)
T 3dty_A 84 DGIQAVSIATPNGTHYSITKAALEAG-LHVVC---EKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIA 159 (398)
T ss_dssp TCCSEEEEESCGGGHHHHHHHHHHTT-CEEEE---CSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCC-CeEEE---eCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHh
Confidence 36999999999988788888888865 55555 233333332 22 1234444333333 678889999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.|
T Consensus 160 ~G~i 163 (398)
T 3dty_A 160 AGEL 163 (398)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 189
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=70.08 E-value=4.8 Score=26.86 Aligned_cols=35 Identities=11% Similarity=-0.059 Sum_probs=25.2
Q ss_pred CCcEEEEccCC---------------hHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.+|+|+--.+. ...+..++++|++||.++.+.+..
T Consensus 280 ~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 280 PFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 39988754332 245778899999999998776543
No 190
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=70.05 E-value=7.4 Score=25.61 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=25.6
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.++|++|.|+|.....+.+-.+++.|-+++..+.
T Consensus 62 ~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa 95 (344)
T 3tz6_A 62 SGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSS 95 (344)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred ccCCEEEECCChHHHHHHHHHHHhCCCEEEECCC
Confidence 4799999999987756666666777777777654
No 191
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=70.00 E-value=7.4 Score=26.17 Aligned_cols=71 Identities=15% Similarity=0.182 Sum_probs=45.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|+......+.+..+++.| .-|.+-- |...+.. .+ -.+++.+.-.+.. ...+.++.+++.
T Consensus 149 ~~vD~V~iatp~~~h~~~~~~al~aG-k~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 224 (433)
T 1h6d_A 149 PKIDAVYIILPNSLHAEFAIRAFKAG-KHVMCEK---PMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIR 224 (433)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECS---SCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchhHHHHHHHHHHCC-CcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHHH
Confidence 47999999999888777788887765 4444432 2223322 22 1234444333322 677899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 225 ~G~i 228 (433)
T 1h6d_A 225 ENQL 228 (433)
T ss_dssp TTSS
T ss_pred cCCC
Confidence 9987
No 192
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=69.83 E-value=12 Score=23.55 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=23.9
Q ss_pred CCCcEEEEccCChH-----------------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|... ....++..++++|+++.++.
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 37999999988531 13344556667899999875
No 193
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=69.82 E-value=3.8 Score=27.14 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=25.0
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|+||+|+|.....+.+-..++.|.+-+++..+
T Consensus 105 ~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~p 138 (354)
T 3cps_A 105 GAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 138 (354)
T ss_dssp TCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCC
Confidence 7999999999877677777888777633444433
No 194
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=69.58 E-value=2.3 Score=25.88 Aligned_cols=34 Identities=12% Similarity=0.258 Sum_probs=24.8
Q ss_pred CCCcEEEEccCC--------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+..-.- ...+..+.++|+|||++++...
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 468888875221 1247889999999999998754
No 195
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=69.43 E-value=4.3 Score=26.63 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=24.9
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|+||+|+|.....+.+-..++.|.+-+++..+
T Consensus 88 ~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~p 121 (334)
T 3cmc_O 88 GVDIVVESTGRFTKREDAAKHLEAGAKKVIISAP 121 (334)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred ccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999877677777888877633333333
No 196
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=69.21 E-value=4.3 Score=26.57 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=24.9
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|+||+|+|.....+.+-.+++.|.+-+++..+
T Consensus 89 ~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~ 122 (332)
T 1hdg_O 89 GVDFVIESTGVFRNREKAELHLQAGAKKVIITAP 122 (332)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred CCCEEEECCccchhHHHHHHHHHcCCcEEEEeCC
Confidence 7999999999877677788888877633333333
No 197
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=69.09 E-value=2.6 Score=26.07 Aligned_cols=36 Identities=17% Similarity=0.039 Sum_probs=26.0
Q ss_pred CCCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 14 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 14 ~~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+.+|+|+..... ...+..+.++|+++|+++..+..
T Consensus 182 ~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 182 FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 3578998865422 23577888999999999987653
No 198
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=68.53 E-value=1.9 Score=27.73 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=27.1
Q ss_pred CCCcEEEEccCChH-----------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK-----------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~-----------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+||-.++.+. +-..++.+|+|||+++..|-
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 46899998888763 34567889999999998874
No 199
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=68.36 E-value=5.4 Score=22.49 Aligned_cols=33 Identities=12% Similarity=-0.028 Sum_probs=23.4
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhc-CCEEEEEc
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRA-GGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g 47 (105)
.++|++|.|++.......+...++. +|...+++
T Consensus 83 ~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred ccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 4799999999998766666667665 55444443
No 200
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=68.32 E-value=8.5 Score=24.99 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=24.7
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|+|++|+|+....+.+..+++.|-. |++..+
T Consensus 79 ~vDvV~~aTp~~~h~~~a~~~l~aGk~-Vi~sap 111 (334)
T 2czc_A 79 KVDIIVDATPGGIGAKNKPLYEKAGVK-AIFQGG 111 (334)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCE-EEECTT
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCc-eEeecc
Confidence 799999999987767777777777644 555433
No 201
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=68.02 E-value=3.5 Score=24.09 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=24.8
Q ss_pred CCCcEEEEccCC------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+.+... ...+..+.++|+++|++++...
T Consensus 93 ~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 93 DAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp TTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred CCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 468999875322 2347788899999999998754
No 202
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=67.61 E-value=3.2 Score=28.18 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=25.7
Q ss_pred CCCcEEEEccCC-----hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF-----NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~-----~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|++.... ...+..++++|+|||.+++.-.
T Consensus 287 ~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 287 GPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 579999975332 2357889999999999998643
No 203
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=67.53 E-value=6.1 Score=25.49 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=23.9
Q ss_pred CCCCcEEEEccCC----------hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+-.... ...+..+.++|+++|.++.-.
T Consensus 179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 4579988843311 345788999999999999864
No 204
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=67.51 E-value=7.9 Score=24.29 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=25.2
Q ss_pred CCCcEEEEc-----cCC----------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDC-----AGF----------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~-----~g~----------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-. ... ...+..+.++|+|||++++...
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 468888763 211 2457889999999999998764
No 205
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=67.38 E-value=23 Score=23.10 Aligned_cols=71 Identities=15% Similarity=0.038 Sum_probs=45.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++...+.+.+..+|+.| .-|.+- .|...+.. .+ -.++..+.-.+.. ...+..+.+++.
T Consensus 82 ~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~E---KP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~ 157 (383)
T 3oqb_A 82 KNDTMFFDAATTQARPGLLTQAINAG-KHVYCE---KPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPGLKKIAFLRD 157 (383)
T ss_dssp SSCCEEEECSCSSSSHHHHHHHHTTT-CEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred CCCCEEEECCCchHHHHHHHHHHHCC-CeEEEc---CCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHHHHHHHHHHH
Confidence 46999999999877778888888776 444442 22223322 22 1234443322222 678899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 158 ~g~i 161 (383)
T 3oqb_A 158 SGFF 161 (383)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9887
No 206
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=67.35 E-value=3.3 Score=25.05 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=24.0
Q ss_pred CCCCcEEEE-ccC----Ch------HHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFD-CAG----FN------KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid-~~g----~~------~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+- +.+ .. ..+..+.++|+|||+++.+-
T Consensus 126 ~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 357999887 222 11 22678999999999998763
No 207
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=67.24 E-value=9.2 Score=25.07 Aligned_cols=34 Identities=24% Similarity=0.195 Sum_probs=27.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.++|++|.|+|.....+.+-.+++.|-+++..+.
T Consensus 74 ~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa 107 (337)
T 3dr3_A 74 PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSG 107 (337)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCC
Confidence 4799999999988766666677777888887764
No 208
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=67.21 E-value=27 Score=23.86 Aligned_cols=72 Identities=10% Similarity=0.092 Sum_probs=46.9
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCC-----EEEEEcCCCCCccccch---hh----hhcC-eEEEEeecc--CCCHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGG-----KVCLVGMGHHEMTVPLT---PA----AARE-VDVVGVFRY--KNTWPL 79 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G-----~~v~~g~~~~~~~~~~~---~~----~~~~-~~i~~~~~~--~~~~~~ 79 (105)
..+|+|+.|++.....+.+..+|+.|. +-|.+- .|...+.. .+ -.++ +.+.-.+.. ...+.+
T Consensus 107 ~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~E---KPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p~~~~ 183 (479)
T 2nvw_A 107 KDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVE---WALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVR 183 (479)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEE---SSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCHHHHH
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEe---CCCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCHHHHH
Confidence 479999999999887888888888861 444442 22223322 22 1244 444333333 678899
Q ss_pred HHHHHHcCCC
Q 040104 80 CLEFLRSGKI 89 (105)
Q Consensus 80 ~~~~v~~g~i 89 (105)
+.+++.+|.|
T Consensus 184 ~k~~i~~G~i 193 (479)
T 2nvw_A 184 AKELISEGCI 193 (479)
T ss_dssp HHHHHHTTTT
T ss_pred HHHHHHcCCC
Confidence 9999999987
No 209
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=67.17 E-value=11 Score=22.19 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=24.2
Q ss_pred CCCcEEEEcc-----CChH---HHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCA-----GFNK---TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~-----g~~~---~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-.. ..+. .+..+.++|++||.+++.-
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4688888642 2221 5788999999999999874
No 210
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=67.16 E-value=22 Score=22.90 Aligned_cols=76 Identities=20% Similarity=0.269 Sum_probs=48.8
Q ss_pred HHc-CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh---h----hcCeEEEEeecc--CCCH
Q 040104 11 KAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA---A----AREVDVVGVFRY--KNTW 77 (105)
Q Consensus 11 ~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~---~----~~~~~i~~~~~~--~~~~ 77 (105)
++. ...+|+|+-|++...+.+.+..+|+.| +-|.+= .|...+.. .+ . .+++.+.-.+.. ...+
T Consensus 69 ~ll~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~E---KPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~ 144 (390)
T 4h3v_A 69 TLLERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCE---KPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAI 144 (390)
T ss_dssp HHTTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEE---SSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHH
T ss_pred HHhcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceee---cCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchH
Confidence 344 357999999999988788888888766 445542 23333332 22 1 134444333333 7788
Q ss_pred HHHHHHHHcCCCC
Q 040104 78 PLCLEFLRSGKID 90 (105)
Q Consensus 78 ~~~~~~v~~g~i~ 90 (105)
.++.+++++|.|.
T Consensus 145 ~~~k~~i~~g~iG 157 (390)
T 4h3v_A 145 ALARKLVADGKIG 157 (390)
T ss_dssp HHHHHHHHTTSSC
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999883
No 211
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=67.15 E-value=4.1 Score=24.33 Aligned_cols=19 Identities=37% Similarity=0.552 Sum_probs=16.0
Q ss_pred HHHHHHHHhhhcCCEEEEE
Q 040104 28 KTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~ 46 (105)
..+..+.++|+++|+++.+
T Consensus 160 ~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 160 KLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp HHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEEE
Confidence 4577888999999999886
No 212
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=67.11 E-value=12 Score=22.15 Aligned_cols=33 Identities=12% Similarity=0.020 Sum_probs=24.9
Q ss_pred CCCcEEEEccCC--------------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF--------------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|.|+-.... ...+..+.++|++||.+++..
T Consensus 110 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp TCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 468888765444 246888999999999988763
No 213
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=67.08 E-value=5.7 Score=25.85 Aligned_cols=35 Identities=11% Similarity=-0.057 Sum_probs=24.6
Q ss_pred CCCCcEEEE-ccCC---------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 14 GTGIDVSFD-CAGF---------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 14 ~~g~d~vid-~~g~---------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++.+|+||- .... ...+..+.++|+++|.++.-..
T Consensus 157 ~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 157 PASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 457998874 2211 2347889999999999987643
No 214
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=67.05 E-value=1.9 Score=27.60 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=25.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+.............+.|+|+|++++.-
T Consensus 143 ~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred CCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 468988876555554577889999999998863
No 215
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=67.05 E-value=3.7 Score=25.87 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=24.7
Q ss_pred CCCCcEEEEccC------------ChHHHHHHHHhhhcCCEEEEE
Q 040104 14 GTGIDVSFDCAG------------FNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 14 ~~g~d~vid~~g------------~~~~~~~~~~~l~~~G~~v~~ 46 (105)
.+.+|+|+...- -...+..+.++|++||.+++-
T Consensus 175 ~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 457999886432 223578899999999999885
No 216
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=67.04 E-value=21 Score=22.52 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=44.9
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+.|+++....+.+..+++.|- -|.+- .|...+.. .+ -.++..+.-.+.. ...+..+-+++
T Consensus 63 ~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~E---KPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i 138 (294)
T 1lc0_A 63 SQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVE---YPMTLSFAAAQELWELAAQKGRVLHEEHVELLMEEFEFLRREV 138 (294)
T ss_dssp CSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEE---SCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEe---CCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhccHHHHHHHHHH
Confidence 3579999999998887888888887754 44442 22333332 22 1234444333332 66788888888
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|.+
T Consensus 139 ~~g~i 143 (294)
T 1lc0_A 139 LGKEL 143 (294)
T ss_dssp TTCCE
T ss_pred hcCCe
Confidence 88766
No 217
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=67.03 E-value=10 Score=23.04 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=24.0
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+||-.... ...++.+.++|++||.++.-.
T Consensus 146 ~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 146 GSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 479988843322 234788899999999998754
No 218
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=66.94 E-value=2.6 Score=26.43 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=24.2
Q ss_pred CCcEEE-EccC--------ChHHHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSF-DCAG--------FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vi-d~~g--------~~~~~~~~~~~l~~~G~~v~~g 47 (105)
.+|++| |.-. .+..+....++|++||+++.+.
T Consensus 173 ~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 173 KVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp CEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 689877 5321 2346889999999999999865
No 219
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=66.75 E-value=3.5 Score=25.85 Aligned_cols=32 Identities=13% Similarity=0.056 Sum_probs=24.0
Q ss_pred CCcEEEEccCChH-HHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNK-TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g 47 (105)
.+|+|+-....+. .+..+.+.|+++|.++...
T Consensus 139 ~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 139 KYDLIFCLQEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp CEEEEEESSCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred hCCEEEECCCChHHHHHHHHHhcCCCcEEEEEc
Confidence 4788875444443 3788999999999998863
No 220
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=66.73 E-value=5.6 Score=24.05 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=24.8
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-... . ...+..+.++|++||++++...
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 46888886422 1 3357889999999999998753
No 221
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=66.46 E-value=8.5 Score=25.21 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=25.6
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
.++|+||.|+|.....+.+-.+++.|-+++..+
T Consensus 76 ~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s 108 (350)
T 2ep5_A 76 KDVDVVLSALPNELAESIELELVKNGKIVVSNA 108 (350)
T ss_dssp TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECS
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEECC
Confidence 479999999998776777777777777766654
No 222
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=66.39 E-value=5.7 Score=24.63 Aligned_cols=33 Identities=15% Similarity=0.042 Sum_probs=23.3
Q ss_pred CCCcEEEEccC-----C---hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG-----F---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|++... . ...+....++|+|||+++++.
T Consensus 151 ~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 151 GKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp CCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 46899997421 1 124677889999999987554
No 223
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=66.33 E-value=2.6 Score=27.11 Aligned_cols=32 Identities=13% Similarity=-0.011 Sum_probs=24.5
Q ss_pred CCcEEEEccCChH-HHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNK-TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g 47 (105)
.+|+|+-....+. .+..+.++|++||+++++.
T Consensus 187 ~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 187 TFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp -EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred CeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 5898886555543 4888999999999999775
No 224
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=66.26 E-value=6.8 Score=25.61 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=24.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.++|+||+|+|.....+.+-.+++.|.+++.+..
T Consensus 67 ~~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa 100 (340)
T 2hjs_A 67 SSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSG 100 (340)
T ss_dssp GGCSEEEECSCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCC
Confidence 3799999999987655666666666766665543
No 225
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=65.93 E-value=5 Score=27.66 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=29.4
Q ss_pred CCcEEEEccCChHHH-HHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTM-STALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 50 (105)
..|+++.++|....+ .+.+..+++++.++.+|...
T Consensus 302 ~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 302 TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 589999999887644 58999999999999998644
No 226
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=65.91 E-value=7 Score=25.89 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=18.4
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGG 41 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G 41 (105)
++|+||+|+|.....+.+-.+++.|-
T Consensus 65 ~~DvVf~a~g~~~s~~~a~~~~~~G~ 90 (367)
T 1t4b_A 65 ALDIIVTCQGGDYTNEIYPKLRESGW 90 (367)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECCCchhHHHHHHHHHHCCC
Confidence 79999999998775555555555443
No 227
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=65.89 E-value=5.3 Score=25.01 Aligned_cols=34 Identities=12% Similarity=-0.116 Sum_probs=25.2
Q ss_pred CCCCcEEEEc-----cCCh-HHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDC-----AGFN-KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~-----~g~~-~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+-. +.++ .++.+..++|+|||++++.-
T Consensus 133 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 3468988764 2332 36889999999999999863
No 228
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=65.79 E-value=5.7 Score=24.77 Aligned_cols=34 Identities=9% Similarity=0.099 Sum_probs=24.6
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.-. . ...+..+.++|+|||++++...
T Consensus 149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 35788875422 1 3458899999999999998753
No 229
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=65.70 E-value=2.5 Score=25.71 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=23.7
Q ss_pred CCCcEEEEc-----c-CChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDC-----A-GFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~-----~-g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-. . .-...+..+.++|+|||++++..
T Consensus 102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 457888752 1 22345888999999999998864
No 230
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=64.97 E-value=2.6 Score=27.09 Aligned_cols=22 Identities=14% Similarity=0.362 Sum_probs=18.6
Q ss_pred HHHHHHHhhhcCCEEEEEcCCC
Q 040104 29 TMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.+..+..+|++||+++++..++
T Consensus 215 ~L~~a~~~L~~gGrl~visfHS 236 (285)
T 1wg8_A 215 FLEQAAEVLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHEEEEEEEEEEECSH
T ss_pred HHHHHHHHhcCCCEEEEEecCc
Confidence 4778999999999999997543
No 231
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=64.88 E-value=6.3 Score=26.62 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=38.3
Q ss_pred CCCcEEEEccCChH------HHHHHHHhhhcCCEEEEEcCCC-CCccc--cchhhhhcCeEEEEeecc
Q 040104 15 TGIDVSFDCAGFNK------TMSTALSATRAGGKVCLVGMGH-HEMTV--PLTPAAAREVDVVGVFRY 73 (105)
Q Consensus 15 ~g~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~~~~~i~~~~~~ 73 (105)
.++|++|.|+..+. .-++.++.+++++.++.++... +..+. +...+..+++++.+....
T Consensus 274 ~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nl 341 (405)
T 4dio_A 274 AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNV 341 (405)
T ss_dssp HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSG
T ss_pred cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCC
Confidence 36999999964331 2468999999999999998632 33222 111223467787777643
No 232
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=64.72 E-value=2.5 Score=25.15 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=24.4
Q ss_pred CCCcEEEEcc-----CCh----HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCA-----GFN----KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~-----g~~----~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.. ..+ ..+..+.++|+++|++++...
T Consensus 100 ~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 100 SSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 3578777531 122 358889999999999998754
No 233
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=64.72 E-value=12 Score=22.43 Aligned_cols=34 Identities=9% Similarity=-0.015 Sum_probs=25.4
Q ss_pred CCCCcEEEEc-----cCC---hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+-. .+. ...+..+.++|+|||++++..
T Consensus 99 ~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 99 DKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp TTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred CCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4579998863 332 245888999999999998764
No 234
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=64.09 E-value=11 Score=19.55 Aligned_cols=31 Identities=29% Similarity=0.249 Sum_probs=18.0
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
++|++|+|+|..........+.+.+..++.+
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHHTTCEEECC
T ss_pred CCCEEEECCCchhhHHHHHHHHHhCCCEEEe
Confidence 6899999988665333333344444444433
No 235
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=64.00 E-value=26 Score=22.41 Aligned_cols=71 Identities=18% Similarity=0.105 Sum_probs=45.4
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCC-HHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNT-WPLCLEFL 84 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~-~~~~~~~v 84 (105)
..+|+|+-|++.....+.+..+++.| +-|.+- .|...+.. .+ -.++..+.-.+.. ... +.++.+++
T Consensus 65 ~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i 140 (336)
T 2p2s_A 65 ASIDLIACAVIPCDRAELALRTLDAG-KDFFTA---KPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELV 140 (336)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCChhhHHHHHHHHHHCC-CcEEEe---CCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHH
Confidence 47999999999888788888888765 444442 23333322 22 1234444323232 455 89999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
++|.+
T Consensus 141 ~~g~i 145 (336)
T 2p2s_A 141 QRGEI 145 (336)
T ss_dssp HTTTT
T ss_pred hCCCC
Confidence 99987
No 236
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=63.96 E-value=5.3 Score=22.56 Aligned_cols=34 Identities=15% Similarity=0.323 Sum_probs=25.3
Q ss_pred CCCcEEEEccCC------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-...- ...+..+.++|+++|++++...
T Consensus 74 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 74 NSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp TCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 468988864322 2357889999999999998854
No 237
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=63.84 E-value=20 Score=22.24 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=23.0
Q ss_pred CCCcEEEEccCCh----------H---------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|.. . ....++..++.+|+++.++.
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 3799999998742 1 12344455556799999975
No 238
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=63.83 E-value=10 Score=22.83 Aligned_cols=19 Identities=16% Similarity=0.123 Sum_probs=14.2
Q ss_pred HHHHHHHhhhcCCEEEEEc
Q 040104 29 TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g 47 (105)
.+..+.++|+|||.+.+..
T Consensus 132 ~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 132 FAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEe
Confidence 4777778888888877653
No 239
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=63.80 E-value=6.9 Score=24.97 Aligned_cols=71 Identities=13% Similarity=0.028 Sum_probs=43.9
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| +-+.+-- |...+.. .+ -.++..+.-.+.. .+.+..+.++++
T Consensus 62 ~~~D~V~i~tp~~~h~~~~~~al~~G-k~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 137 (323)
T 1xea_A 62 YGVDAVMIHAATDVHSTLAAFFLHLG-IPTFVDK---PLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELA 137 (323)
T ss_dssp GCCSEEEECSCGGGHHHHHHHHHHTT-CCEEEES---CSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHH
T ss_pred cCCCEEEEECCchhHHHHHHHHHHCC-CeEEEeC---CCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHh
Confidence 36899999999887677777777765 4333321 2222222 22 1244444433333 667888999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 138 ~g~i 141 (323)
T 1xea_A 138 QQEC 141 (323)
T ss_dssp HTSC
T ss_pred cCCc
Confidence 9887
No 240
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=63.80 E-value=19 Score=21.86 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=25.1
Q ss_pred CCCcEEEEcc-----CC----------hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 15 TGIDVSFDCA-----GF----------NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g~d~vid~~-----g~----------~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
..+|+|+-.. .. ...+..+.++|+++|++++++..
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 3799988632 11 14577889999999999986543
No 241
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=63.70 E-value=20 Score=22.20 Aligned_cols=34 Identities=24% Similarity=0.485 Sum_probs=23.9
Q ss_pred CCCcEEEEccCChH-------------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|... ....+...++++|+++.++.
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 37999999987420 23345556677899999865
No 242
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=63.64 E-value=7.3 Score=23.30 Aligned_cols=34 Identities=6% Similarity=0.179 Sum_probs=24.8
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-... . ...+..+.++|+++|++++...
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp TCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 46888886422 2 1358889999999999988753
No 243
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=63.55 E-value=5.1 Score=22.84 Aligned_cols=34 Identities=12% Similarity=0.285 Sum_probs=24.7
Q ss_pred CCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+..... ...+..+.++|+++|+++....
T Consensus 99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 468988865331 3457788899999999988643
No 244
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=63.54 E-value=2.3 Score=25.90 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=24.5
Q ss_pred CCCcEEEEc-----cCChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDC-----AGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-. .+-...+..+.++|+|||++++..
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 113 EELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp TCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 468888642 333446888999999999999875
No 245
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=63.23 E-value=5.7 Score=24.09 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=23.9
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-... . ...+..+.++|++||++++.
T Consensus 103 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 103 ESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 35888886432 1 34578899999999999876
No 246
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=63.18 E-value=11 Score=24.75 Aligned_cols=32 Identities=9% Similarity=0.110 Sum_probs=23.9
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
++|+||.|+|.....+.+-.++..|-+++..+
T Consensus 83 ~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s 114 (354)
T 1ys4_A 83 DVDIVFSALPSDLAKKFEPEFAKEGKLIFSNA 114 (354)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCCEEEECC
Confidence 79999999998775666666666666655554
No 247
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=62.84 E-value=27 Score=22.30 Aligned_cols=71 Identities=14% Similarity=0.157 Sum_probs=46.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+-|++.....+.+..+++.| +-|.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.++++
T Consensus 65 ~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~E---KP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~ 140 (334)
T 3ohs_X 65 PNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCE---KPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLA 140 (334)
T ss_dssp TTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEE---SSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEE---CCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHh
Confidence 47999999999988788888888776 445542 22333322 22 1234444333322 678899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 141 ~g~i 144 (334)
T 3ohs_X 141 QGTL 144 (334)
T ss_dssp HTTT
T ss_pred cCCC
Confidence 9987
No 248
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=62.83 E-value=17 Score=22.38 Aligned_cols=35 Identities=17% Similarity=0.335 Sum_probs=24.8
Q ss_pred CCCcEEEEccCChH-------------------------HHHHHHHhhhcCCEEEEEcCC
Q 040104 15 TGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 49 (105)
+++|++|.++|... ....++..++++|+++.++..
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 37999999988521 234456667779999999763
No 249
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=62.81 E-value=7.6 Score=23.32 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=23.4
Q ss_pred CCCcEEEEccCChH----HHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-....+. .+..+...|+++|++++.
T Consensus 146 ~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 146 AMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 46898886554432 255689999999999883
No 250
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=62.71 E-value=2.8 Score=29.06 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=29.1
Q ss_pred CCCcEEEEccCChHHHH-HHHHhhhcCCEEEEEcCC
Q 040104 15 TGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 49 (105)
..+|+++++.|....+. ..+..+++++.++.+|..
T Consensus 319 ~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 319 SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 36899999999876554 489999999999999865
No 251
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=62.67 E-value=29 Score=22.54 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=46.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEE--EEeecc-CCCHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDV--VGVFRY-KNTWPLCLEFL 84 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i--~~~~~~-~~~~~~~~~~v 84 (105)
..+|+|+-|++.....+.+..+++.| .-|.+- .|...+.. .+ -.++..+ .+.... ...+.++.+++
T Consensus 86 ~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~E---KPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i 161 (357)
T 3ec7_A 86 KDVEVVIITASNEAHADVAVAALNAN-KYVFCE---KPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNII 161 (357)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEE---SSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHH
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEee---cCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHH
Confidence 47999999999988788888888776 444442 22223322 22 1234433 333332 77889999999
Q ss_pred HcCCCC
Q 040104 85 RSGKID 90 (105)
Q Consensus 85 ~~g~i~ 90 (105)
.+|.+.
T Consensus 162 ~~g~iG 167 (357)
T 3ec7_A 162 DSGEIG 167 (357)
T ss_dssp HHTTTC
T ss_pred hcCCCC
Confidence 999873
No 252
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=62.63 E-value=5.7 Score=25.16 Aligned_cols=42 Identities=36% Similarity=0.397 Sum_probs=28.3
Q ss_pred HHHHHHHcCCCCcEEEEccCChH-------------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 6 VEKIDKAMGTGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 6 ~~~~~~~~~~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+++.+.. +++|+.|.++|... ....++..++++|.++.++.
T Consensus 94 ~~~~~~~~-G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 94 YEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHHHHHHH-SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred HHHHHHHc-CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 34444444 37999999987631 23455667788999999875
No 253
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=62.59 E-value=27 Score=22.29 Aligned_cols=72 Identities=8% Similarity=0.047 Sum_probs=46.3
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+-|++.....+.+..+++.| .-|.+- .|...+.. .+ -.++..+.-.+.. ...+.++.+++
T Consensus 71 ~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~E---KPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 146 (318)
T 3oa2_A 71 ATALDYVSICSPNYLHYPHIAAGLRLG-CDVICE---KPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKV 146 (318)
T ss_dssp TTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH
T ss_pred CCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEE---CCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHHHHHH
Confidence 457999999999988788888888775 555553 23333332 22 1234444333322 67889999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|.+
T Consensus 147 ~~g~i 151 (318)
T 3oa2_A 147 AREKS 151 (318)
T ss_dssp HHS-C
T ss_pred hcCCC
Confidence 99877
No 254
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=62.57 E-value=28 Score=22.38 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=46.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| .-|.+- .|...+.. .+ -.++..+.-.+.. ...+.++.++++
T Consensus 81 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~E---KPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 156 (340)
T 1zh8_A 81 GLVDAVDLTLPVELNLPFIEKALRKG-VHVICE---KPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVE 156 (340)
T ss_dssp SCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEE---SSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHh
Confidence 47999999999888778888888765 445543 22333332 22 1234444333332 778899999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 157 ~g~i 160 (340)
T 1zh8_A 157 SGAI 160 (340)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 9987
No 255
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=62.47 E-value=11 Score=23.91 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=34.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVV 68 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 68 (105)
.+.|+|+.+++....-...+..+++++.++.++..+....+ .....++.++.
T Consensus 214 ~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i 265 (300)
T 2rir_A 214 KDIDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL 265 (300)
T ss_dssp TTCSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred hCCCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence 36899999998644224577889999999999864333333 33333455544
No 256
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=62.34 E-value=7.6 Score=24.37 Aligned_cols=34 Identities=12% Similarity=-0.037 Sum_probs=25.3
Q ss_pred CCCCcEEEEccCC----------hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+--... ...+..+.+.|+++|.++.-.
T Consensus 146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 4579988753322 345889999999999998874
No 257
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=61.89 E-value=8 Score=22.58 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=24.7
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.-. . ...+..+.++|+++|++++...
T Consensus 110 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence 45788876432 1 3358889999999999998753
No 258
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=61.88 E-value=7.3 Score=22.88 Aligned_cols=33 Identities=12% Similarity=0.155 Sum_probs=25.0
Q ss_pred CCcEEEEccC-----ChHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAG-----FNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g-----~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+|+|+-.-. -...+..+.++|++||++++...
T Consensus 116 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 116 DYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 4998886422 23468899999999999998754
No 259
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=61.81 E-value=5.2 Score=23.54 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=23.8
Q ss_pred CCCcEEEEccCC--------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-...- ...+..+.++|+++|++++.-
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 468888864211 135788999999999998863
No 260
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=61.79 E-value=13 Score=23.80 Aligned_cols=32 Identities=6% Similarity=0.003 Sum_probs=21.9
Q ss_pred CCCcEEEEcc----CCh--------HHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCA----GFN--------KTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~----g~~--------~~~~~~~~~l~~~G~~v~~ 46 (105)
..+|+|+-.. |.. ..+..+.++|+|||.+++-
T Consensus 147 ~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 147 ERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 4689988532 221 2356677999999988873
No 261
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=61.14 E-value=6.5 Score=22.90 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=24.4
Q ss_pred CCCcEEEEcc-----C--C-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCA-----G--F-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~-----g--~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-.- . . ...+..+.++|++||++++.-
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 101 KRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp CCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 5689888632 1 1 335888999999999998764
No 262
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=60.80 E-value=4.6 Score=26.73 Aligned_cols=21 Identities=14% Similarity=0.537 Sum_probs=18.2
Q ss_pred HHHHHHHhhhcCCEEEEEcCC
Q 040104 29 TMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+..+.++|++||+++++...
T Consensus 256 ~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 256 ALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHhCCCCEEEEEecC
Confidence 477899999999999999764
No 263
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=60.41 E-value=7.2 Score=24.88 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=23.7
Q ss_pred CCCcEEEEccC---------ChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG---------FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g---------~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+.... ....+..+.++|+|||.++..-
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 57898875321 1345888999999999987653
No 264
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=60.36 E-value=10 Score=24.22 Aligned_cols=21 Identities=14% Similarity=0.333 Sum_probs=17.4
Q ss_pred HHHHHHHHhhhcCCEEEEEcC
Q 040104 28 KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+..+.++|++||+++...+
T Consensus 227 ~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 227 RLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEEeC
Confidence 457889999999999988654
No 265
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=60.18 E-value=10 Score=21.53 Aligned_cols=35 Identities=6% Similarity=0.087 Sum_probs=24.4
Q ss_pred CCCcEEEEccCC-------hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 15 TGIDVSFDCAGF-------NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
+.+|+|+-...- ...+..+.++|+++|++++....
T Consensus 118 ~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 118 RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 368888864321 13477788899999999987543
No 266
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=59.80 E-value=6.6 Score=26.54 Aligned_cols=21 Identities=14% Similarity=0.341 Sum_probs=17.2
Q ss_pred HHHHHHHHhhhcCCEEEEEcC
Q 040104 28 KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+..+..+|++||+++...+
T Consensus 370 ~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 370 ELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp HHHHHHHTTEEEEEEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEEeC
Confidence 347788999999999997654
No 267
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=59.71 E-value=15 Score=25.13 Aligned_cols=21 Identities=14% Similarity=0.279 Sum_probs=16.7
Q ss_pred HHHHHHHHhhhcCCEEEEEcC
Q 040104 28 KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+..+..+|++||+++...+
T Consensus 215 ~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 215 EILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp HHHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEEEe
Confidence 347788999999999986544
No 268
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=59.67 E-value=7.4 Score=22.85 Aligned_cols=25 Identities=12% Similarity=0.142 Sum_probs=22.4
Q ss_pred EEEEccCChHHHHHHHHhhhcCCEE
Q 040104 19 VSFDCAGFNKTMSTALSATRAGGKV 43 (105)
Q Consensus 19 ~vid~~g~~~~~~~~~~~l~~~G~~ 43 (105)
++++.+|.+.-++..+++|+|.|.+
T Consensus 122 ~~ie~tg~~~ki~~~~~~l~~~gi~ 146 (165)
T 2pc6_A 122 YTIELTGTRSKLDGFLQAVDCNLIL 146 (165)
T ss_dssp EEEEEEECHHHHHHHHHHSCGGGEE
T ss_pred EEEEEcCCHHHHHHHHHHhhhcCCE
Confidence 5889999999999999999999943
No 269
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=59.61 E-value=2.3 Score=28.27 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=26.6
Q ss_pred CCcEEEEccCChHH----HHHHHHhhh-cCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKT----MSTALSATR-AGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~----~~~~~~~l~-~~G~~v~~g~~~ 50 (105)
|+|+++||+|.-.. .+.+-..++ .|.+-|++..+.
T Consensus 107 gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps 146 (356)
T 3hja_A 107 GIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPA 146 (356)
T ss_dssp TCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCC
T ss_pred CCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCC
Confidence 89999999998665 566777888 777666666554
No 270
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=59.59 E-value=20 Score=21.26 Aligned_cols=33 Identities=6% Similarity=0.018 Sum_probs=23.9
Q ss_pred CCCcEEEEccCC--------------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF--------------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|.|+-.... ...+..+.++|++||++++..
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 467877654332 345888999999999998764
No 271
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=59.40 E-value=7.4 Score=22.93 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=24.8
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-... . ...+..+.++|+++|++++...
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 35888876422 1 2358889999999999998753
No 272
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=59.05 E-value=8.8 Score=25.29 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=23.4
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|+||.|+|...+.+.+-.+ +.|.+++..+.
T Consensus 82 ~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa 113 (359)
T 1xyg_A 82 TVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSA 113 (359)
T ss_dssp GCSEEEECCCTTTHHHHHHTS-CTTCEEEECSS
T ss_pred CCCEEEEcCCchhHHHHHHHH-hCCCEEEECCc
Confidence 799999999987756666666 55666666553
No 273
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=58.99 E-value=9.4 Score=22.80 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=23.8
Q ss_pred CCCcEEEEccCC------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-...- ...+..+.++|++||++++.-
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 468888864321 235788999999999998753
No 274
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=58.86 E-value=8.2 Score=24.58 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=24.8
Q ss_pred CCCCcEEEEccCC----------hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+-.... ...+..+.++|+++|+++...
T Consensus 167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp TTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 4579988843211 245788999999999999875
No 275
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=58.80 E-value=11 Score=24.72 Aligned_cols=33 Identities=12% Similarity=-0.034 Sum_probs=22.5
Q ss_pred CCcEEEEccCChHHHHHHH-HhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTAL-SATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~-~~l~~~G~~v~~g~~ 49 (105)
++|+|++|+|.....+.+- .+++.| ..|+...+
T Consensus 81 ~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap 114 (343)
T 2yyy_A 81 DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGG 114 (343)
T ss_dssp GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTT
T ss_pred CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCC
Confidence 7999999998866455553 566655 55665443
No 276
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=58.72 E-value=16 Score=22.71 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=22.1
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|++||++.... ....+..+...|.-+++|..
T Consensus 45 ~~DvvIDfT~p~a-~~~~~~~a~~~g~~~VigTT 77 (245)
T 1p9l_A 45 NTEVVIDFTHPDV-VMGNLEFLIDNGIHAVVGTT 77 (245)
T ss_dssp TCCEEEECSCTTT-HHHHHHHHHHTTCEEEECCC
T ss_pred CCcEEEEccChHH-HHHHHHHHHHcCCCEEEcCC
Confidence 5799999886554 56666666666666666644
No 277
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=58.66 E-value=7.5 Score=24.69 Aligned_cols=34 Identities=12% Similarity=0.065 Sum_probs=23.9
Q ss_pred CCCCcEEEE-ccCC----------hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFD-CAGF----------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid-~~g~----------~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+- .... ...+..+.++|+++|.++...
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 346898873 3211 345788999999999999874
No 278
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=58.62 E-value=13 Score=22.96 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=23.7
Q ss_pred CCCcEEEEccCChH-------------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|... ....++..++++|+++.++.
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 37999999987521 13345556667899999875
No 279
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=58.61 E-value=8.2 Score=24.60 Aligned_cols=33 Identities=12% Similarity=0.038 Sum_probs=23.5
Q ss_pred CCCcEEEEccCC----------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+||--... ...+..+.++|+++|.++...
T Consensus 156 ~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 468988753221 235778999999999999875
No 280
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=58.41 E-value=9.2 Score=23.93 Aligned_cols=34 Identities=15% Similarity=0.054 Sum_probs=24.3
Q ss_pred CCCcEEEEc-cCC-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDC-AGF-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~-~g~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-. ... ...+..+.++|++||.++....
T Consensus 191 ~~fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 191 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CCccEEEECCchhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 357866643 222 2458889999999999998764
No 281
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=58.38 E-value=8.9 Score=24.01 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=24.7
Q ss_pred CCCcEEEEccCC-----hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF-----NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~-----~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-...- ...+..+.++|++||++++..
T Consensus 112 ~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 112 QKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence 468888764321 346888999999999998854
No 282
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=58.26 E-value=7.6 Score=24.83 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=24.3
Q ss_pred CCCCcEEE-EccC---------ChHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|| |... ....+..+.++|+++|.++.-.
T Consensus 166 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 166 QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 45799888 4332 1234888999999999999764
No 283
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=58.25 E-value=9 Score=22.92 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=24.1
Q ss_pred CCcEEEEccC-------C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAG-------F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g-------~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+|+|+.... . ...+..+.++|++||+++++..
T Consensus 132 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 132 LFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp CEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 5888886321 1 2357888999999999998764
No 284
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=57.90 E-value=11 Score=23.75 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=25.2
Q ss_pred CCCCcEEEE-cc---CC------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 14 GTGIDVSFD-CA---GF------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 14 ~~g~d~vid-~~---g~------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++.+|+|+- .. +. ...+..+.++|+++|.++....
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 457998874 32 11 2457889999999999998753
No 285
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=57.48 E-value=7.5 Score=22.39 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=23.2
Q ss_pred CCCcEEEEccC--------ChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+.... ....+....++|+++|+++++.
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 46788876421 1235778889999999987764
No 286
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=57.23 E-value=31 Score=23.18 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=24.0
Q ss_pred CcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 17 IDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 17 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
+|+|++++++...+..++..++.|-.++..
T Consensus 94 iDvVV~ai~G~aGl~ptlaAi~aGK~VvlA 123 (388)
T 1r0k_A 94 ADWTMAAIIGCAGLKATLAAIRKGKTVALA 123 (388)
T ss_dssp CSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCEEEEe
Confidence 999999995555688889999887776654
No 287
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=57.22 E-value=10 Score=23.46 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=23.7
Q ss_pred CCCcEEEEccC-----Ch---HHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG-----FN---KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g-----~~---~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+.... .+ ..+..+.++|++||.++++.
T Consensus 183 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp SCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 46888886431 11 35788899999999977664
No 288
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=56.80 E-value=27 Score=20.89 Aligned_cols=42 Identities=24% Similarity=0.340 Sum_probs=25.7
Q ss_pred HHHHHHcC-CCCcEEEEccCC--------hH------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 7 EKIDKAMG-TGIDVSFDCAGF--------NK------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 7 ~~~~~~~~-~g~d~vid~~g~--------~~------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++.+..+ +++|++|.++|. .. ....+...++++|+++.++.
T Consensus 62 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 130 (236)
T 1ooe_A 62 EQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA 130 (236)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECc
Confidence 34444443 579999999883 11 12334445556789998875
No 289
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=56.78 E-value=7.9 Score=25.95 Aligned_cols=21 Identities=10% Similarity=0.284 Sum_probs=17.0
Q ss_pred HHHHHHHHhhhcCCEEEEEcC
Q 040104 28 KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+..+.++|++||+++...+
T Consensus 355 ~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 355 EILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp HHHHHHGGGEEEEEEEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEEEC
Confidence 347788899999999998754
No 290
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=56.73 E-value=17 Score=22.79 Aligned_cols=12 Identities=17% Similarity=0.404 Sum_probs=10.1
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 107 g~iD~lVnnAG~ 118 (296)
T 3k31_A 107 GSLDFVVHAVAF 118 (296)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999875
No 291
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=56.65 E-value=21 Score=22.65 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=24.6
Q ss_pred CCCcEEEEccC-----Ch---HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----FN---KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~~---~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|+|+-.-. .+ ..+..+.++|+|||++++.-.
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 46898885321 11 357888999999999998853
No 292
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=56.25 E-value=11 Score=22.95 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=17.0
Q ss_pred HHHHHHHHhhhcCCEEEEEc
Q 040104 28 KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g 47 (105)
..+..+.++|++||.+++..
T Consensus 154 ~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 154 TLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEe
Confidence 56888999999999998853
No 293
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=56.20 E-value=34 Score=21.36 Aligned_cols=76 Identities=12% Similarity=0.184 Sum_probs=40.1
Q ss_pred HHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHHHHHHH
Q 040104 7 EKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLCLEFLR 85 (105)
Q Consensus 7 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~ 85 (105)
+..+++...++|+||-+.+... .-+++.++..| +.++|.-...... ..+..+...... .....++++.+.
T Consensus 172 ~~a~~ll~~~~daI~~~~D~~a--~Gv~~a~~e~G-v~viG~D~~~~~~------~~~~~LTsv~~~~~~~~~~a~~~~~ 242 (296)
T 2hqb_A 172 ELFQELQKEQVDVFYPAGDGYH--VPVVEAIKDQG-DFAIGYVGDQADL------GGSTILTSTVQHVDDLYVLVAKRFQ 242 (296)
T ss_dssp HHHHHHHTTTCCEEECCCTTTH--HHHHHHHHHHT-CEEEEEESCCSSS------SCSSEEEEEEECHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCcEEEECCCCCC--HHHHHHHHHcC-CEEEEEecchhhh------CCCeEEEEEEEEhHHHHHHHHHHHH
Confidence 3344444457899887666533 34455555566 5556653321111 012234333333 455666777777
Q ss_pred cCCCCC
Q 040104 86 SGKIDI 91 (105)
Q Consensus 86 ~g~i~~ 91 (105)
+|+++.
T Consensus 243 ~g~~~~ 248 (296)
T 2hqb_A 243 EGKLES 248 (296)
T ss_dssp TTCCCC
T ss_pred cCCCCC
Confidence 888754
No 294
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=56.20 E-value=5.7 Score=24.08 Aligned_cols=33 Identities=15% Similarity=0.147 Sum_probs=23.8
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-... . ...+..+.++|++||++++.-
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 46888886432 2 335778889999999998764
No 295
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=55.98 E-value=3.9 Score=25.06 Aligned_cols=20 Identities=10% Similarity=0.209 Sum_probs=17.5
Q ss_pred hHHHHHHHHhhhcCCEEEEE
Q 040104 27 NKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 27 ~~~~~~~~~~l~~~G~~v~~ 46 (105)
...+....++|+|||+++.+
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEE
Confidence 45689999999999999986
No 296
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=55.81 E-value=9.2 Score=23.12 Aligned_cols=25 Identities=4% Similarity=0.013 Sum_probs=22.4
Q ss_pred EEEEccCChHHHHHHHHhhhcCCEE
Q 040104 19 VSFDCAGFNKTMSTALSATRAGGKV 43 (105)
Q Consensus 19 ~vid~~g~~~~~~~~~~~l~~~G~~ 43 (105)
++|+.+|.+.-++..+++|+|.|.+
T Consensus 148 ~~iE~tG~~~ki~a~i~~l~~~gi~ 172 (193)
T 2fgc_A 148 AIIEITGARSKVEAFINLLPQKQVE 172 (193)
T ss_dssp EEEEEEECHHHHHHHHHHSCGGGEE
T ss_pred EEEEEcCCHHHHHHHHHHhhhhCCE
Confidence 5889999999999999999999943
No 297
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=55.48 E-value=8.3 Score=23.78 Aligned_cols=33 Identities=9% Similarity=-0.019 Sum_probs=23.7
Q ss_pred CCCcEEEEc-cCC-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDC-AGF-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~-~g~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-. +.. ...++.+..+|++||+++.+-
T Consensus 150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 150 EAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp TCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 468988853 333 335677889999999988763
No 298
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=55.37 E-value=21 Score=20.47 Aligned_cols=35 Identities=11% Similarity=0.135 Sum_probs=23.2
Q ss_pred CCCCcEEEEcc--CC-----hHHHHHHHH--hhhcCCEEEEEcC
Q 040104 14 GTGIDVSFDCA--GF-----NKTMSTALS--ATRAGGKVCLVGM 48 (105)
Q Consensus 14 ~~g~d~vid~~--g~-----~~~~~~~~~--~l~~~G~~v~~g~ 48 (105)
++.+|+|+-.. .. ...+....+ +|+++|++++--.
T Consensus 111 ~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 111 TSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp SSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 45799888632 11 123556666 8999999988643
No 299
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=55.31 E-value=42 Score=22.13 Aligned_cols=72 Identities=18% Similarity=0.155 Sum_probs=47.1
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+-|++.....+.+..+|+.| +-|.+= .|...+.. .+ -.+++.+.-.+.. ...+.++.+++
T Consensus 94 ~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 169 (412)
T 4gqa_A 94 DPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCE---KPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQII 169 (412)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEE---SCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHH
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEee---cCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHH
Confidence 357999999999988788888888765 445542 23333332 22 1234444333332 77889999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
++|.|
T Consensus 170 ~~G~i 174 (412)
T 4gqa_A 170 ARGDI 174 (412)
T ss_dssp HHTTT
T ss_pred hcCCc
Confidence 99988
No 300
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=55.28 E-value=9.3 Score=22.99 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=23.2
Q ss_pred CCcEEEEccC-----Ch---HHHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAG-----FN---KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g-----~~---~~~~~~~~~l~~~G~~v~~g 47 (105)
.+|+|+-.-. .+ ..+..+.++|+++|++++..
T Consensus 146 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 146 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 5888875421 11 35788899999999999864
No 301
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=55.11 E-value=25 Score=21.17 Aligned_cols=20 Identities=25% Similarity=0.391 Sum_probs=13.3
Q ss_pred HHHHHHcC-CCCcEEEEccCC
Q 040104 7 EKIDKAMG-TGIDVSFDCAGF 26 (105)
Q Consensus 7 ~~~~~~~~-~g~d~vid~~g~ 26 (105)
+++.+..+ +++|++|.++|.
T Consensus 66 ~~~~~~~~~g~iD~lv~~Ag~ 86 (241)
T 1dhr_A 66 AEVGKLLGDQKVDAILCVAGG 86 (241)
T ss_dssp HHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHhCCCCCCEEEEcccc
Confidence 34444443 579999999883
No 302
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=55.01 E-value=9.9 Score=22.34 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=24.7
Q ss_pred CCCcEEEEccC----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-... . ...+..+.++|++||++++...
T Consensus 114 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 114 ESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp TCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 46888886422 1 3457889999999999998743
No 303
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=55.00 E-value=14 Score=23.20 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=24.6
Q ss_pred CCCcEEEEcc-----CChH----HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCA-----GFNK----TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~-----g~~~----~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+... .++. .+..+.++|+|||++++...
T Consensus 186 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 186 EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4578888532 2333 37889999999999998764
No 304
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=54.69 E-value=21 Score=21.18 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=22.6
Q ss_pred CCCcEEEEccCCh-----------H---------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|.. + ....+...++++|+++.++.
T Consensus 58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS 117 (223)
T 3uce_A 58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSG 117 (223)
T ss_dssp CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecc
Confidence 4799999998843 0 12233344556899999875
No 305
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=54.56 E-value=22 Score=22.42 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=22.6
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
++|+|||++.... .......+...|.-+++|.+
T Consensus 72 ~~DvVIDft~p~~-~~~~~~~a~~~G~~vVigTt 104 (273)
T 1dih_A 72 DFDVFIDFTRPEG-TLNHLAFCRQHGKGMVIGTT 104 (273)
T ss_dssp SCSEEEECSCHHH-HHHHHHHHHHTTCEEEECCC
T ss_pred CCCEEEEcCChHH-HHHHHHHHHhCCCCEEEECC
Confidence 6899999886444 55555566666666777654
No 306
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=54.52 E-value=29 Score=22.51 Aligned_cols=71 Identities=11% Similarity=0.022 Sum_probs=45.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+-|++.....+.+..+++.| .-|.+- .|...+.. .+ -.++..+.-.+.. ...+.++.+++.
T Consensus 67 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~E---KPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 142 (359)
T 3m2t_A 67 VPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFVE---KPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQ 142 (359)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHTT-CEEEEC---SCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHHHHHHHHHHT
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEE---CCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHHHHHHHHHHH
Confidence 46899999999888777788887765 445552 23333322 22 1234444333322 678889999999
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|.+
T Consensus 143 ~g~i 146 (359)
T 3m2t_A 143 VDEF 146 (359)
T ss_dssp SGGG
T ss_pred CCCC
Confidence 9876
No 307
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=54.43 E-value=11 Score=23.32 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=22.9
Q ss_pred CCCcEEEEccCC----------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-.-.- ...+..+.++|++||++++..
T Consensus 132 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 132 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 357888753221 124777889999999998764
No 308
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=54.42 E-value=14 Score=22.59 Aligned_cols=19 Identities=37% Similarity=0.473 Sum_probs=16.5
Q ss_pred HHHHHHHhhhcCCEEEEEc
Q 040104 29 TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g 47 (105)
.+..+.++|+++|+++.+-
T Consensus 158 ~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 158 TIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHccCCcEEEEEE
Confidence 5788999999999999874
No 309
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=54.42 E-value=18 Score=22.46 Aligned_cols=21 Identities=5% Similarity=0.202 Sum_probs=17.0
Q ss_pred HHHHHHHHhhhcCCEEEEEcC
Q 040104 28 KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+..+.++|++||+++...+
T Consensus 192 ~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 192 ELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEEEC
Confidence 357788899999999988654
No 310
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=54.37 E-value=11 Score=23.31 Aligned_cols=26 Identities=15% Similarity=0.135 Sum_probs=17.5
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGG 41 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G 41 (105)
++|+||+|+++..+-......++..|
T Consensus 121 ~~DvVi~~~d~~~~~~~l~~~~~~~~ 146 (249)
T 1jw9_B 121 EHDLVLDCTDNVAVRNQLNAGCFAAK 146 (249)
T ss_dssp TSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence 68999999998874444444444444
No 311
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=54.34 E-value=6.9 Score=23.99 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=24.8
Q ss_pred CCCcEEEEc-----cCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDC-----AGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-. .+-...+..+.++|+|||++++...
T Consensus 113 ~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 113 EELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp TCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 468888753 2234458889999999999998753
No 312
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=54.15 E-value=12 Score=22.56 Aligned_cols=32 Identities=6% Similarity=0.132 Sum_probs=23.7
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-... . ...+..+.++|++||++++.
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 46888886432 1 23578899999999999885
No 313
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=54.05 E-value=7.4 Score=23.60 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=24.0
Q ss_pred CCCcEEEEccC------C----hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG------F----NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g------~----~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+.... . ...+..+.++|+|||+++....
T Consensus 156 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 46898886422 1 1246778889999999998763
No 314
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=53.92 E-value=16 Score=20.70 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=23.3
Q ss_pred CCCcEEEEccCC---------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGF---------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~---------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-.... ...+..+.++|+++|++++.-
T Consensus 106 ~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 106 TDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 468988864111 235778889999999988753
No 315
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=53.88 E-value=26 Score=21.51 Aligned_cols=56 Identities=0% Similarity=-0.049 Sum_probs=31.8
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhh-cCeEEEEee
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAA-REVDVVGVF 71 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~i~~~~ 71 (105)
.++|+||-+++.+. .+..+...+..|..|.+.-.+..-.|.+...+- ..++|.-+.
T Consensus 90 ~~adLVIaAT~d~~-~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST 146 (223)
T 3dfz_A 90 LNVFFIVVATNDQA-VNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAIST 146 (223)
T ss_dssp SSCSEEEECCCCTH-HHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEEC
T ss_pred CCCCEEEECCCCHH-HHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEEC
Confidence 36899999999998 666555555588888775433323344333332 345554343
No 316
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=53.81 E-value=6.8 Score=23.94 Aligned_cols=32 Identities=6% Similarity=-0.056 Sum_probs=23.0
Q ss_pred CCCcEEEEccC------C----hHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAG------F----NKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g------~----~~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-..+ . ...+..+.++|+|||++++-
T Consensus 109 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 46888886431 1 12477888999999999885
No 317
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=53.68 E-value=10 Score=23.25 Aligned_cols=33 Identities=15% Similarity=0.395 Sum_probs=24.0
Q ss_pred CCCcEEEEcc-----CC-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-.. .. ...+..+.++|+|||.+++.-
T Consensus 104 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 104 SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 4688887531 22 235888999999999999864
No 318
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=53.61 E-value=22 Score=23.04 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=22.6
Q ss_pred CCCcEEEEccCCh----HHHHHHHHhhhcCCEEEE
Q 040104 15 TGIDVSFDCAGFN----KTMSTALSATRAGGKVCL 45 (105)
Q Consensus 15 ~g~d~vid~~g~~----~~~~~~~~~l~~~G~~v~ 45 (105)
..+|+|++|+++. .+.+.+..+|+.|=.++.
T Consensus 85 ~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvt 119 (331)
T 3c8m_A 85 RDFDIVVDATPASADGKKELAFYKETFENGKDVVT 119 (331)
T ss_dssp SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEe
Confidence 3689999999983 446677778877655554
No 319
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=53.59 E-value=11 Score=24.10 Aligned_cols=20 Identities=10% Similarity=0.006 Sum_probs=16.9
Q ss_pred HHHHHHHHhhhcCCEEEEEc
Q 040104 28 KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~g 47 (105)
..+..+.+.|++||+++..-
T Consensus 152 ~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 152 YLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEE
Confidence 35788999999999999854
No 320
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=53.55 E-value=27 Score=21.05 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=22.5
Q ss_pred CCCcEEEEccCChH------------------HHHHHHHhhhcC--CEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK------------------TMSTALSATRAG--GKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~------------------~~~~~~~~l~~~--G~~v~~g~ 48 (105)
+++|++|.++|... ....++..+++. |+++.++.
T Consensus 61 ~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS 114 (257)
T 1fjh_A 61 KGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISS 114 (257)
T ss_dssp TCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred CCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECC
Confidence 47899999987532 133444555443 89999875
No 321
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=53.54 E-value=21 Score=23.78 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=23.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCC--EEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGG--KVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G--~~v~~g~ 48 (105)
.++|++|.|+|.....+.+-.++..|- +++..+.
T Consensus 63 ~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 63 KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 479999999998775555555565552 5666543
No 322
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=53.25 E-value=25 Score=22.02 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=22.8
Q ss_pred CCCcEEEEccCChH--------------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK--------------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.+.|... ....++..++++|+++.++.
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 37999999987411 12234445567899999975
No 323
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=53.17 E-value=17 Score=22.08 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=21.4
Q ss_pred CCcEEEEccCC---hHHHHHHHH-hhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGF---NKTMSTALS-ATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~---~~~~~~~~~-~l~~~G~~v~~g 47 (105)
.+|+|+-..+. ...+..+.+ .|++||++++..
T Consensus 152 ~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 58987733333 223556665 999999999853
No 324
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=53.08 E-value=21 Score=22.49 Aligned_cols=31 Identities=10% Similarity=0.257 Sum_probs=23.3
Q ss_pred CCcEEEEccCChHHHHH-HHHhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNKTMST-ALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~-~~~~l~~~G~~v~~g 47 (105)
.+|+|++|.+... +.+ ..++|+.|--++...
T Consensus 60 ~pD~VVe~A~~~a-v~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 60 DVSTVVECASPEA-VKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp TCCEEEECSCHHH-HHHHHHHHTTSSSEEEECC
T ss_pred CCCEEEECCCHHH-HHHHHHHHHHCCCCEEEcC
Confidence 6788888887766 554 888888887777664
No 325
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=53.03 E-value=13 Score=20.65 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=22.9
Q ss_pred CCCcEEEEcc---C-ChHHHHHHH--HhhhcCCEEEEEcCC
Q 040104 15 TGIDVSFDCA---G-FNKTMSTAL--SATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g~d~vid~~---g-~~~~~~~~~--~~l~~~G~~v~~g~~ 49 (105)
+.+|+|+-.. + .+..+.... ++|+++|+++.....
T Consensus 109 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 109 ERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred CceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 3689888642 1 233455555 789999998876543
No 326
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=53.00 E-value=37 Score=23.26 Aligned_cols=77 Identities=19% Similarity=0.118 Sum_probs=44.4
Q ss_pred HHHc-CCCCcEEEEccCChH-HHHHHHHhhhcCCEEEEEcCCCCCccc-cchhh----hhcCeEEEEeecc-CCCHHHHH
Q 040104 10 DKAM-GTGIDVSFDCAGFNK-TMSTALSATRAGGKVCLVGMGHHEMTV-PLTPA----AAREVDVVGVFRY-KNTWPLCL 81 (105)
Q Consensus 10 ~~~~-~~g~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~----~~~~~~i~~~~~~-~~~~~~~~ 81 (105)
.++. ...+|+|++|++++. ..+.+..+++.|=.++.. .. +... ....+ -.+++.+...... ....-+++
T Consensus 100 eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~-nk--~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~eLv 176 (446)
T 3upl_A 100 DLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM-NV--EADVTIGPYLKAQADKQGVIYSLGAGDEPSSCMELI 176 (446)
T ss_dssp HHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC-CH--HHHHHHHHHHHHHHHHHTCCEEECTTSHHHHHHHHH
T ss_pred HHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec-Cc--ccCHHHHHHHHHHHHHhCCeeeecCCcchHHHHHHH
Confidence 3444 357999999999864 467788888777666543 11 1111 11122 1234444444333 34467788
Q ss_pred HHHHcCCC
Q 040104 82 EFLRSGKI 89 (105)
Q Consensus 82 ~~v~~g~i 89 (105)
++...+.+
T Consensus 177 ~~a~~~G~ 184 (446)
T 3upl_A 177 EFVSALGY 184 (446)
T ss_dssp HHHHHTTC
T ss_pred HHHHhCCC
Confidence 88887776
No 327
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=52.95 E-value=11 Score=22.76 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=23.7
Q ss_pred CCCcEEEEccC--------ChHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-.-. -...+..+.++|++||++++..
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 36888885322 1234778899999999999875
No 328
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=52.92 E-value=46 Score=21.82 Aligned_cols=75 Identities=11% Similarity=0.137 Sum_probs=41.9
Q ss_pred HHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeecc-CCCHHHHHHHHH
Q 040104 7 EKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLCLEFLR 85 (105)
Q Consensus 7 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~v~ 85 (105)
+..+.+...|+|+|+-+.+.. -+++.++..|. ..+|.......+ ..+..+...... ...+.++++.+.
T Consensus 199 ~~a~~l~~~G~DvIf~~~d~~----Gv~~aa~e~Gv-~vIG~D~dq~~~------~p~~vltS~~k~~~~~~~~~v~~~~ 267 (356)
T 3s99_A 199 DAAKALIDQGVDIITQHTDST----AAIQVAHDRGI-KAFGQASDMIKF------APDTQLTAVVDEWGPYYIDRAKAVL 267 (356)
T ss_dssp HHHHHHHHTTCSEEEESSSSS----HHHHHHHHTTC-EEEEEESCCGGG------STTTEEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEECCCch----HHHHHHHHcCC-EEEEEcCchhhh------CCCcEEEEEEEeHHHHHHHHHHHHH
Confidence 333444456899999988765 34555556675 344643221111 112233333333 556778888888
Q ss_pred cCCCCCC
Q 040104 86 SGKIDIK 92 (105)
Q Consensus 86 ~g~i~~~ 92 (105)
+|+++..
T Consensus 268 ~G~~~~~ 274 (356)
T 3s99_A 268 DGTWKSQ 274 (356)
T ss_dssp HTCCCCC
T ss_pred cCCCCCC
Confidence 9998654
No 329
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=52.85 E-value=12 Score=23.13 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=24.7
Q ss_pred CCCCcEEEEcc-----CC-hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+-.. .. ...+..+.++|+|||++++.-
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 35688887542 22 235788999999999998764
No 330
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=52.79 E-value=14 Score=24.34 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=22.5
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|+||.|+|.....+.+-.+ +.|.+++.++.
T Consensus 80 ~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa 111 (352)
T 2nqt_A 80 GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGA 111 (352)
T ss_dssp TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSS
T ss_pred CCCEEEECCCCcchHHHHHHH-hCCCEEEEECC
Confidence 799999999986644444445 56667666654
No 331
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=52.73 E-value=14 Score=24.42 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=25.8
Q ss_pred CCCcEEEEccC--------Ch---HHHHHHHHhhhcCCEEEEEcCCC
Q 040104 15 TGIDVSFDCAG--------FN---KTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 15 ~g~d~vid~~g--------~~---~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
+.+|+|+-... .. ..+..+.++|++||++++++...
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 46898885322 11 24788999999999999987543
No 332
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=52.63 E-value=6.6 Score=23.73 Aligned_cols=34 Identities=18% Similarity=0.018 Sum_probs=23.5
Q ss_pred CCCCcEEEEccCC---hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 47 (105)
.+.+|+|+-.... ...+..+.++|++||.++.-.
T Consensus 140 ~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 140 DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 3578987743322 234677889999999998754
No 333
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=52.26 E-value=12 Score=23.09 Aligned_cols=19 Identities=26% Similarity=0.431 Sum_probs=15.9
Q ss_pred HHHHHHHhhhcCCEEEEEc
Q 040104 29 TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g 47 (105)
.+..+..+|+++|+++.+-
T Consensus 152 ~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 152 WIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEE
Confidence 4777889999999998863
No 334
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=52.26 E-value=15 Score=22.42 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=23.6
Q ss_pred CCCcEEEEccCCh--------------HHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAGFN--------------KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|.|+-....+ ..+..+.++|++||++++..
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 4577776544432 45788999999999998763
No 335
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=52.17 E-value=35 Score=20.92 Aligned_cols=15 Identities=13% Similarity=0.206 Sum_probs=11.0
Q ss_pred HHhhhcCCEEEEEcC
Q 040104 34 LSATRAGGKVCLVGM 48 (105)
Q Consensus 34 ~~~l~~~G~~v~~g~ 48 (105)
...++.+|+|+.++.
T Consensus 133 ~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 133 KKLMPEGGSIVATTY 147 (256)
T ss_dssp HTTCTTCEEEEEEEC
T ss_pred HHHhccCCEEEEEec
Confidence 344567899999875
No 336
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=52.11 E-value=23 Score=22.11 Aligned_cols=33 Identities=12% Similarity=-0.095 Sum_probs=22.6
Q ss_pred CCCCcEEEEccC----Ch--------HHHHHHHHhhhcCC--EEEEE
Q 040104 14 GTGIDVSFDCAG----FN--------KTMSTALSATRAGG--KVCLV 46 (105)
Q Consensus 14 ~~g~d~vid~~g----~~--------~~~~~~~~~l~~~G--~~v~~ 46 (105)
++.+|+|+-..+ .+ .++..+.++|+||| .+++-
T Consensus 138 ~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 138 VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 347899885332 22 14677889999999 77763
No 337
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=51.85 E-value=35 Score=21.31 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=22.6
Q ss_pred CCCcEEEEccCCh-----------H---------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|.. + ....++..++++|+++.++.
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 3799999987642 0 12334445567899999875
No 338
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=51.66 E-value=19 Score=24.08 Aligned_cols=33 Identities=21% Similarity=0.057 Sum_probs=25.6
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|++|.|.|+....+.+-.+++.|-+++..+.
T Consensus 93 ~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa 125 (381)
T 3hsk_A 93 ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAK 125 (381)
T ss_dssp GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCC
Confidence 689999999988756666666777777777764
No 339
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=51.33 E-value=26 Score=20.02 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=22.2
Q ss_pred CCcEEEEccCChHHHHHHHHhhhc---CCEEEEE
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRA---GGKVCLV 46 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~---~G~~v~~ 46 (105)
++.++.|..-+|..+..+++.++. +++++.+
T Consensus 36 g~~vi~DyaHnP~si~a~l~al~~~~~~~riivv 69 (163)
T 3mvn_A 36 NITVYDDFAHHPTAITATIDALRAKVGQQRILAV 69 (163)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 567888876688888888888773 4565544
No 340
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=51.10 E-value=20 Score=24.08 Aligned_cols=45 Identities=13% Similarity=0.195 Sum_probs=27.5
Q ss_pred HHHHHHHHH--cCCCCcEEE-EccC-----Ch-----H-----HHHHHHHhhhcCCEEEEEcC
Q 040104 4 EEVEKIDKA--MGTGIDVSF-DCAG-----FN-----K-----TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 4 ~~~~~~~~~--~~~g~d~vi-d~~g-----~~-----~-----~~~~~~~~l~~~G~~v~~g~ 48 (105)
|..+.+++. .++.+|+|| |+.. .+ . -+..+.+.|+++|.++.-+.
T Consensus 270 Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 270 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 344555543 245799876 6421 11 1 24567788999999987653
No 341
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=50.62 E-value=13 Score=21.91 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=23.4
Q ss_pred CCCcEEEEccC--C------hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG--F------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g--~------~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-... . ...+..+.++|+++|++++..
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 36888775422 1 234778899999999998774
No 342
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=50.47 E-value=47 Score=21.24 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=44.9
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hhh----hcCeE--EEEeec--cCCCHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PAA----AREVD--VVGVFR--YKNTWPLCLEF 83 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~----~~~~~--i~~~~~--~~~~~~~~~~~ 83 (105)
..+|+|+-|+......+.+..+++.|- -|.+ ..|...+.. .+. .++.. +.-.+. +...+.++.++
T Consensus 66 ~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~---EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~ 141 (337)
T 3ip3_A 66 EKPDILVINTVFSLNGKILLEALERKI-HAFV---EKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKL 141 (337)
T ss_dssp HCCSEEEECSSHHHHHHHHHHHHHTTC-EEEE---CSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHH
T ss_pred CCCCEEEEeCCcchHHHHHHHHHHCCC-cEEE---eCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHH
Confidence 369999999998887778888887764 4444 223333322 221 23333 222222 27788999999
Q ss_pred HHcCCC
Q 040104 84 LRSGKI 89 (105)
Q Consensus 84 v~~g~i 89 (105)
+.+|.+
T Consensus 142 i~~g~i 147 (337)
T 3ip3_A 142 VSEGAV 147 (337)
T ss_dssp HHHTTT
T ss_pred HhcCCc
Confidence 999987
No 343
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=50.34 E-value=20 Score=22.96 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=23.8
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+|+|++|++.....+.+..+++.|- -+++..
T Consensus 57 ~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ek 89 (320)
T 1f06_A 57 DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTY 89 (320)
T ss_dssp TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCC
T ss_pred cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECC
Confidence 468999999988765777888887754 444443
No 344
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=50.22 E-value=20 Score=22.22 Aligned_cols=34 Identities=12% Similarity=0.123 Sum_probs=25.0
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.+|++||.+--.. ....++.+...|.-+++|...
T Consensus 53 ~~DVvIDFT~P~a-~~~~~~~~~~~g~~~ViGTTG 86 (228)
T 1vm6_A 53 SPDVVIDFSSPEA-LPKTVDLCKKYRAGLVLGTTA 86 (228)
T ss_dssp CCSEEEECSCGGG-HHHHHHHHHHHTCEEEECCCS
T ss_pred CCCEEEECCCHHH-HHHHHHHHHHcCCCEEEeCCC
Confidence 5899999886544 677777777777777787643
No 345
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=49.90 E-value=13 Score=24.48 Aligned_cols=30 Identities=7% Similarity=-0.119 Sum_probs=21.7
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEE
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCL 45 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 45 (105)
..|+|+||+++......+..+|+.|=.++.
T Consensus 84 ~~DvVV~~t~~~~~a~~~~~AL~aGkhVVt 113 (358)
T 1ebf_A 84 KPVILVDNTSSAYIAGFYTKFVENGISIAT 113 (358)
T ss_dssp SCEEEEECSCCHHHHTTHHHHHHTTCEEEC
T ss_pred CCcEEEEcCCChHHHHHHHHHHHCCCeEEe
Confidence 349999999998766777777766555444
No 346
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=49.75 E-value=16 Score=22.43 Aligned_cols=12 Identities=17% Similarity=0.443 Sum_probs=10.0
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 90 g~iD~lvnnAg~ 101 (262)
T 3ksu_A 90 GKVDIAINTVGK 101 (262)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999883
No 347
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=49.62 E-value=18 Score=22.12 Aligned_cols=12 Identities=25% Similarity=0.041 Sum_probs=9.8
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 85 g~id~lv~nAg~ 96 (259)
T 3edm_A 85 GEIHGLVHVAGG 96 (259)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 348
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=49.38 E-value=6.1 Score=24.04 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=22.9
Q ss_pred CCCcEE-EEccCCh----------HHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVS-FDCAGFN----------KTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~v-id~~g~~----------~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|.| +|++... ..+.++.++|+|||+++.+.
T Consensus 127 ~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 457876 4654321 24677899999999998764
No 349
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=48.98 E-value=29 Score=21.58 Aligned_cols=32 Identities=9% Similarity=0.062 Sum_probs=22.3
Q ss_pred CCcEEEEccCChHHHHHHH-------HhhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNKTMSTAL-------SATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~-------~~l~~~G~~v~~g 47 (105)
++|+||.|++.+..+...+ ..++++..++.++
T Consensus 61 ~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s 99 (299)
T 1vpd_A 61 QCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMS 99 (299)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence 4799999998765455554 4566777776664
No 350
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=48.91 E-value=41 Score=22.25 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
++.+++.+..+.+.+ |+=+.|+.++++.++++++
T Consensus 95 ~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~ 128 (452)
T 3n5m_A 95 KLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIAR 128 (452)
T ss_dssp HHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHH
Confidence 455666666665667 6666666666899998887
No 351
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=48.79 E-value=16 Score=22.48 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=23.8
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-... . ...+..+.++|+|||++++.-
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 46888875422 2 235788999999999998753
No 352
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=48.46 E-value=50 Score=20.99 Aligned_cols=70 Identities=17% Similarity=0.059 Sum_probs=45.3
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHH
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFL 84 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v 84 (105)
...+|+|+-|++.....+.+..+|+.| .-|.+- .|...+.. .+ -.+++.+.-.+.. ...+.++.+++
T Consensus 70 ~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~E---KPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 145 (312)
T 3o9z_A 70 GEGVDYLSIASPNHLHYPQIRMALRLG-ANALSE---KPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERL 145 (312)
T ss_dssp TCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEEC---SSSCSCHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHH
T ss_pred CCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEE---CCCCCCHHHHHHHHHHHHHcCCEEEEEeehhcCHHHHHHHHHH
Confidence 458999999999988788888888876 445542 23333332 22 1234444333322 67888899999
Q ss_pred HcC
Q 040104 85 RSG 87 (105)
Q Consensus 85 ~~g 87 (105)
++|
T Consensus 146 ~~g 148 (312)
T 3o9z_A 146 GQE 148 (312)
T ss_dssp HTC
T ss_pred HcC
Confidence 997
No 353
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=48.38 E-value=31 Score=21.47 Aligned_cols=34 Identities=9% Similarity=0.003 Sum_probs=23.7
Q ss_pred CCCCcEEE--EccCCh----HHHHHHHHhhh---c--CCEEEEEc
Q 040104 14 GTGIDVSF--DCAGFN----KTMSTALSATR---A--GGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vi--d~~g~~----~~~~~~~~~l~---~--~G~~v~~g 47 (105)
++.+|+|+ |+.-.. ..+....++|+ + +|+++++-
T Consensus 161 ~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 161 LQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp CSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred CCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 35799987 444332 35777888999 9 99877653
No 354
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=48.35 E-value=27 Score=23.33 Aligned_cols=33 Identities=21% Similarity=0.069 Sum_probs=22.5
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCC--EEEEEcC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGG--KVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G--~~v~~g~ 48 (105)
++|++|.|+|.....+.+-.++..|- +++..+.
T Consensus 68 ~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 68 KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 69999999998775555555555553 5666543
No 355
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=48.22 E-value=43 Score=20.27 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=23.3
Q ss_pred CCCcEEEEccCCh-------H-------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN-------K-------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|.. . ....+...++++|+++.++.
T Consensus 86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (251)
T 3orf_A 86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGA 145 (251)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEec
Confidence 4799999998831 0 12344555667899999875
No 356
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=48.22 E-value=43 Score=21.62 Aligned_cols=34 Identities=6% Similarity=-0.025 Sum_probs=22.9
Q ss_pred CCCCcEEEEccC---C-------------hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSFDCAG---F-------------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vid~~g---~-------------~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+-... . ...+..+.++|+++|.+++.-
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 457998876222 0 235777889999999965543
No 357
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=47.95 E-value=30 Score=22.73 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.8
Q ss_pred HHHHHHHhhhcCCEEEEEcCC
Q 040104 29 TMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+..++.+|+++|.++....+
T Consensus 307 ~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 307 VNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHhcCCCCEEEEEECC
Confidence 467789999999998887654
No 358
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=47.70 E-value=17 Score=23.39 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=24.6
Q ss_pred CCCCcEEE-Ecc---CC------hHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSF-DCA---GF------NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vi-d~~---g~------~~~~~~~~~~l~~~G~~v~~g 47 (105)
++.+|+|+ |.. +. ...+..+.++|+++|.++.-.
T Consensus 187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 45799888 432 11 345788999999999999864
No 359
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=47.60 E-value=29 Score=21.82 Aligned_cols=33 Identities=9% Similarity=0.013 Sum_probs=22.7
Q ss_pred CCCCcEEEEccC----Ch--------HHHHHHHHhhhcCC--EEEEE
Q 040104 14 GTGIDVSFDCAG----FN--------KTMSTALSATRAGG--KVCLV 46 (105)
Q Consensus 14 ~~g~d~vid~~g----~~--------~~~~~~~~~l~~~G--~~v~~ 46 (105)
++.+|+|+-..+ .+ ..+..+.++|+||| .+++-
T Consensus 146 ~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 146 PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 357999886432 22 13667889999999 87763
No 360
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=47.41 E-value=13 Score=26.65 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=27.3
Q ss_pred CCCcEEEEccCChH-----------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK-----------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~-----------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
..+|+||-.++.+. +-..++.+|+|||++++.|-
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~Y 270 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSY 270 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEe
Confidence 37899998888772 34578999999999998874
No 361
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=47.22 E-value=7.8 Score=22.82 Aligned_cols=31 Identities=13% Similarity=0.059 Sum_probs=22.2
Q ss_pred CcEEEEccC---ChHHHHHHHHhhhcCCEEEEEc
Q 040104 17 IDVSFDCAG---FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 17 ~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g 47 (105)
+|+|+-... ....+..+.++|++||.++.-.
T Consensus 127 fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 127 IDILFMDCDVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 888774322 1345788889999999998754
No 362
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=46.75 E-value=30 Score=22.02 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=42.2
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC-CCccccchhh----hhcCeEEEEeeccCCCHHHHHHHHHcCCC
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPA----AAREVDVVGVFRYKNTWPLCLEFLRSGKI 89 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~v~~g~i 89 (105)
..+|+|+.|++.....+.+..+++. |.-++..-+. ....-....+ -..+..+.-...+...+..+.+++.+|.+
T Consensus 64 ~~~DvViiatp~~~h~~~~~~al~a-G~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i~~g~l 142 (304)
T 3bio_A 64 ESVDVALVCSPSREVERTALEILKK-GICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTLMQAIV 142 (304)
T ss_dssp SSCCEEEECSCHHHHHHHHHHHHTT-TCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCchhhHHHHHHHHHc-CCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHCCCC
Confidence 4689999999988767777777766 4545543221 1111111122 12233322222336778888888888876
No 363
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=46.57 E-value=13 Score=24.95 Aligned_cols=58 Identities=14% Similarity=0.155 Sum_probs=36.7
Q ss_pred CCCcEEEEccCCh-----H-HHHHHHHhhhcCCEEEEEcCCC-CCccc--cchhhhhcCeEEEEeec
Q 040104 15 TGIDVSFDCAGFN-----K-TMSTALSATRAGGKVCLVGMGH-HEMTV--PLTPAAAREVDVVGVFR 72 (105)
Q Consensus 15 ~g~d~vid~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~~~~~i~~~~~ 72 (105)
.++|+||.++..+ . .-++.++.+++++.++.++... ++.+. +-.....+++.+.+...
T Consensus 264 ~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~n 330 (381)
T 3p2y_A 264 TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLN 330 (381)
T ss_dssp TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSC
T ss_pred hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCC
Confidence 4799999986332 1 2478999999999999998743 33221 11112335666666543
No 364
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=46.25 E-value=38 Score=23.17 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=21.0
Q ss_pred CCCcEEEEccCC-hHHHHHHHHhhhcCCEEE
Q 040104 15 TGIDVSFDCAGF-NKTMSTALSATRAGGKVC 44 (105)
Q Consensus 15 ~g~d~vid~~g~-~~~~~~~~~~l~~~G~~v 44 (105)
..+|+|++|+++ ..+.+.+..+|+.|=.++
T Consensus 77 ~diDvVve~tp~~~~h~~~~~~AL~aGKhVv 107 (444)
T 3mtj_A 77 PEIDIVVELIGGLEPARELVMQAIANGKHVV 107 (444)
T ss_dssp TTCCEEEECCCSSTTHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHcCCEEE
Confidence 479999999986 444666677776654443
No 365
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=46.21 E-value=15 Score=21.56 Aligned_cols=32 Identities=6% Similarity=-0.012 Sum_probs=22.1
Q ss_pred CCCcEEEEcc-----CC---hHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-.- .. ...+..+.++|+++|.++..
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp CSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred CCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 4689888432 22 23477888999999977765
No 366
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=45.99 E-value=23 Score=21.62 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=22.5
Q ss_pred CCCcEEEEccCChH-------------------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|... ....++..++++|+++.++.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 37999999987531 12233344566899999875
No 367
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.76 E-value=39 Score=20.78 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=22.3
Q ss_pred CCCcEEEEccCCh--------H---------------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFN--------K---------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~--------~---------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|++|.++|.. . ....++..++.+|+++.++.
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 98 GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 3799999998852 1 12233344456899998875
No 368
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=45.72 E-value=18 Score=23.11 Aligned_cols=34 Identities=15% Similarity=0.112 Sum_probs=24.6
Q ss_pred CCCCcEEE-EccC------------ChHHHHHHHHhhhcCCEEEEEc
Q 040104 14 GTGIDVSF-DCAG------------FNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 14 ~~g~d~vi-d~~g------------~~~~~~~~~~~l~~~G~~v~~g 47 (105)
.+.+|+|+ |..- ....+..+.++|+++|.++...
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 45799887 4321 1345888999999999998763
No 369
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=45.63 E-value=7.2 Score=24.07 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=24.4
Q ss_pred CCcEEEEc-----c-CC----hHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDC-----A-GF----NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~-----~-g~----~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+|+|+.. + .. ..++.+..++|+|||+++..+.
T Consensus 156 ~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 156 LADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 58888874 1 22 1357778899999999999864
No 370
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=45.61 E-value=10 Score=23.58 Aligned_cols=19 Identities=16% Similarity=0.319 Sum_probs=16.4
Q ss_pred HHHHHHHhhhcCCEEEEEc
Q 040104 29 TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g 47 (105)
.+.+..++|+|||++++.-
T Consensus 160 ~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 160 LLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEe
Confidence 5788999999999998763
No 371
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=45.59 E-value=40 Score=20.96 Aligned_cols=19 Identities=16% Similarity=0.302 Sum_probs=12.7
Q ss_pred HHHHHHcCCCCcEEEEccCC
Q 040104 7 EKIDKAMGTGIDVSFDCAGF 26 (105)
Q Consensus 7 ~~~~~~~~~g~d~vid~~g~ 26 (105)
+++.+.. +++|++|.++|.
T Consensus 103 ~~~~~~~-g~iD~lvnnAG~ 121 (281)
T 4dry_A 103 AAVRAEF-ARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHc-CCCCEEEECCCC
Confidence 3343333 479999999875
No 372
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=45.41 E-value=29 Score=23.82 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=16.4
Q ss_pred HHHHHHHhhhcCCEEEEEcC
Q 040104 29 TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+..+.++|++||+++...+
T Consensus 228 iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 228 LIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp HHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHhcCCCCEEEEecc
Confidence 46778899999999987654
No 373
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=45.31 E-value=22 Score=20.87 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=22.1
Q ss_pred CCCcEEEEc-----cCCh---HHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDC-----AGFN---KTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+-. ...+ ..+..+.++|++||.++..
T Consensus 101 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp TTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred CCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 368988843 2222 3577788999999976665
No 374
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=45.26 E-value=56 Score=20.67 Aligned_cols=71 Identities=13% Similarity=0.158 Sum_probs=43.0
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeecc--CCCHHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFRY--KNTWPLCLEFLR 85 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~~--~~~~~~~~~~v~ 85 (105)
..+|+|+.|++.....+.+..+++.| .-+.+-- |...+.. .+ -.++..+.-.+.. ...+..+.+++.
T Consensus 61 ~~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (325)
T 2ho3_A 61 SSFDLVYIASPNSLHFAQAKAALSAG-KHVILEK---PAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLA 136 (325)
T ss_dssp SSCSEEEECSCGGGHHHHHHHHHHTT-CEEEEES---SCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHHT
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHcC-CcEEEec---CCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHhh
Confidence 47999999999887677777777765 4444432 2222222 22 1234444333332 567888888888
Q ss_pred cCCC
Q 040104 86 SGKI 89 (105)
Q Consensus 86 ~g~i 89 (105)
+|++
T Consensus 137 ~G~i 140 (325)
T 2ho3_A 137 DXQV 140 (325)
T ss_dssp TSCE
T ss_pred hcCc
Confidence 8866
No 375
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=45.22 E-value=21 Score=22.00 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=20.3
Q ss_pred CCCcEEEEccCChH---HHH-HHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNK---TMS-TALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~---~~~-~~~~~l~~~G~~v~~ 46 (105)
..+|+|+-....+. .+. .+...|++||+++..
T Consensus 145 ~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 145 ENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 36898875443332 123 334499999999876
No 376
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=45.14 E-value=12 Score=21.65 Aligned_cols=19 Identities=5% Similarity=-0.048 Sum_probs=13.3
Q ss_pred HHHHHHHhhhcCCEEEEEc
Q 040104 29 TMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g 47 (105)
.+..+.++|+++|+++.+.
T Consensus 146 ~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 146 MAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHTCCGGGBCSSSEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEE
Confidence 3456778899999944443
No 377
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=45.00 E-value=20 Score=22.65 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=20.2
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+|++||++.... .......+...|.-+++|..
T Consensus 73 ~~DVVIDfT~p~a-~~~~~~~al~~G~~vVigTT 105 (272)
T 4f3y_A 73 EADYLIDFTLPEG-TLVHLDAALRHDVKLVIGTT 105 (272)
T ss_dssp HCSEEEECSCHHH-HHHHHHHHHHHTCEEEECCC
T ss_pred CCCEEEEcCCHHH-HHHHHHHHHHcCCCEEEECC
Confidence 4799999986554 44444444455555566653
No 378
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=44.68 E-value=49 Score=22.02 Aligned_cols=35 Identities=9% Similarity=-0.037 Sum_probs=25.7
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
++.+.+.+..+.+.+-|+=+.|+.+++..++++++
T Consensus 99 ~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~ 133 (460)
T 3gju_A 99 TLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIW 133 (460)
T ss_dssp HHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHH
Confidence 45566666665567777777777777899998887
No 379
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=44.39 E-value=22 Score=22.79 Aligned_cols=33 Identities=6% Similarity=0.014 Sum_probs=20.8
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+|++||++.-.. ....+..+...|.-+++|..
T Consensus 88 ~aDVvIDFT~p~a-~~~~~~~~l~~Gv~vViGTT 120 (288)
T 3ijp_A 88 NTEGILDFSQPQA-SVLYANYAAQKSLIHIIGTT 120 (288)
T ss_dssp SCSEEEECSCHHH-HHHHHHHHHHHTCEEEECCC
T ss_pred CCCEEEEcCCHHH-HHHHHHHHHHcCCCEEEECC
Confidence 6899999986444 44444455555555556643
No 380
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=44.28 E-value=17 Score=22.58 Aligned_cols=32 Identities=9% Similarity=0.023 Sum_probs=21.9
Q ss_pred CCcEEEE-cc-CChHHHHHHHHhhhcCCEEEEEc
Q 040104 16 GIDVSFD-CA-GFNKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid-~~-g~~~~~~~~~~~l~~~G~~v~~g 47 (105)
.+|+|+- .. +....+..++..|+++|.+++.-
T Consensus 186 ~~D~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 186 VADRVIMGYVHKTHKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCcccHHHHHHHHHHHcCCCCEEEEEE
Confidence 5776664 33 33445788899999999887654
No 381
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=44.25 E-value=5.5 Score=25.59 Aligned_cols=21 Identities=14% Similarity=0.374 Sum_probs=17.6
Q ss_pred HHHHHHHhhhcCCEEEEEcCC
Q 040104 29 TMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+..+..+|++||+++++..+
T Consensus 227 ~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 227 FLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HHHHGGGGEEEEEEEEEEESS
T ss_pred HHHHHHHhhCCCCEEEEEecC
Confidence 477788899999999999754
No 382
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=44.22 E-value=26 Score=23.33 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=27.1
Q ss_pred HHHHHHHHH--cCCCCcEEE-EccC-----Ch------HHHHHH----HHhhhcCCEEEEEcCC
Q 040104 4 EEVEKIDKA--MGTGIDVSF-DCAG-----FN------KTMSTA----LSATRAGGKVCLVGMG 49 (105)
Q Consensus 4 ~~~~~~~~~--~~~g~d~vi-d~~g-----~~------~~~~~~----~~~l~~~G~~v~~g~~ 49 (105)
|..+.+++. .++.+|+|| |... .+ .-+..+ .++|+++|.++.-+.+
T Consensus 253 Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 253 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 334445543 356799776 6432 12 112333 7899999999987643
No 383
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=44.01 E-value=44 Score=19.33 Aligned_cols=9 Identities=0% Similarity=0.017 Sum_probs=4.4
Q ss_pred CEEEEEcCC
Q 040104 41 GKVCLVGMG 49 (105)
Q Consensus 41 G~~v~~g~~ 49 (105)
|.++.+-..
T Consensus 79 gVLiLtDl~ 87 (159)
T 3mtq_A 79 ELIVITDIF 87 (159)
T ss_dssp EEEEEESCT
T ss_pred CEEEEEeCC
Confidence 555554443
No 384
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=43.68 E-value=61 Score=21.57 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=26.8
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhc
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRA 39 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~ 39 (105)
++.+.+.+..+.+.+-|+-+.|+.+++..++++++.
T Consensus 98 ~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~ 133 (459)
T 4a6r_A 98 ELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRR 133 (459)
T ss_dssp HHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHH
Confidence 455666776665677788777777778989888874
No 385
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=43.49 E-value=34 Score=22.35 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=20.4
Q ss_pred CCcEEEEccCChH-HHHHHHHhhhcCCEEEE
Q 040104 16 GIDVSFDCAGFNK-TMSTALSATRAGGKVCL 45 (105)
Q Consensus 16 g~d~vid~~g~~~-~~~~~~~~l~~~G~~v~ 45 (105)
.+|+|++|+++.. +.+.+..+|+.|=.++.
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 5799999999864 34455567766655444
No 386
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=43.22 E-value=5.3 Score=23.39 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=22.5
Q ss_pred CCCcEEEEccCChH---HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK---TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-...... .+..+.++|+++|+++..+.
T Consensus 124 ~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 124 GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 46788776543322 25566778899999988653
No 387
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=43.02 E-value=21 Score=21.34 Aligned_cols=33 Identities=9% Similarity=-0.003 Sum_probs=23.4
Q ss_pred CCcEEEEcc-----CC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+|+|+... .. ...+..+.++|++||+++++-.
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 478887642 21 2357889999999999887754
No 388
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=42.95 E-value=22 Score=23.31 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=24.1
Q ss_pred CCCcEEEEcc-----CC-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-.. .. ...+..+.++|+|||++++..
T Consensus 165 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 165 SSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 4688887532 11 235789999999999998864
No 389
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=42.94 E-value=35 Score=21.77 Aligned_cols=43 Identities=9% Similarity=0.088 Sum_probs=26.8
Q ss_pred HHHHHHHHcCCCCcEEEEccCCh------------H---------------HHHHHHHhhhcCCEEEEEcC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFN------------K---------------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~------------~---------------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+.+.+..+ ++|++|.++|.. . ....++..++++|+|+.++.
T Consensus 103 ~~~~~~~~~g-~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS 172 (329)
T 3lt0_A 103 VANLIHQKYG-KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTY 172 (329)
T ss_dssp HHHHHHHHHC-CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHhcC-CCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 3444444433 799999998731 0 12334445666799999875
No 390
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=42.72 E-value=39 Score=20.54 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=24.2
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-... . ...+..+.++|+ ||+++++..
T Consensus 93 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 93 KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 57899886432 2 335888999999 998887754
No 391
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=42.48 E-value=54 Score=21.96 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
++.+++.+..+.+.+-++=+.|+.++++.++++++
T Consensus 122 ~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~ 156 (457)
T 3tfu_A 122 RLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMAL 156 (457)
T ss_dssp HHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHH
Confidence 45566777766577878777777777888888886
No 392
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=42.34 E-value=61 Score=20.23 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=44.0
Q ss_pred CCcEEEEccCChH---HHHHHHHhhhcCCEEEEEcCCCCCccccchhhhhcCeEEEEeeccCCCHHHHHHHHHcCCC
Q 040104 16 GIDVSFDCAGFNK---TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKI 89 (105)
Q Consensus 16 g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~g~i 89 (105)
..|+++-+ |..- +++..+++.++...++.+|.+. ++.+..+...+++..+.... .+-+.+++.+.+|..
T Consensus 164 ~~D~v~iT-GsTlvN~Ti~~lL~~~~~~~~vvl~GPS~---~~~P~~~~~~Gv~~l~g~~v-~d~~~~l~~i~~G~~ 235 (249)
T 3npg_A 164 EVDGIIAS-ASCIVNGTLDMILDRAKKAKLIVITGPTG---QLLPEFLKGTKVTHLASMKV-TNIEKALVKLKLGSF 235 (249)
T ss_dssp GCSEEEEE-TTHHHHTCHHHHHHHCSSCSEEEEESGGG---CSCGGGGTTSSCCEEEEEEE-SCHHHHHHHHHHTCH
T ss_pred cCCEEEEE-eeeeccCCHHHHHHhCcccCeEEEEecCc---hhhHHHHhhCCccEEEEEEe-cCHHHHHHHHHcccc
Confidence 57888873 3322 3778888888878788988432 23333333466776666544 456778888888753
No 393
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=42.24 E-value=16 Score=22.02 Aligned_cols=32 Identities=9% Similarity=0.053 Sum_probs=23.0
Q ss_pred CCCcEEEE-ccCCh-HHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFD-CAGFN-KTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid-~~g~~-~~~~~~~~~l~~~G~~v~~ 46 (105)
+.+|+|+- .+... ..+..+.++|++||+++..
T Consensus 140 ~~fD~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 140 ESYDIVTARAVARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TCEEEEEEECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEEeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 46898884 34332 3466777899999999886
No 394
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=42.16 E-value=63 Score=20.73 Aligned_cols=44 Identities=11% Similarity=0.055 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhh---hcCCEEEEEc
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSAT---RAGGKVCLVG 47 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l---~~~G~~v~~g 47 (105)
++.+.+.+..+-+.+-++=+.|+..++..++..+ .+++.++...
T Consensus 91 ~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~ 137 (395)
T 1vef_A 91 EFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAM 137 (395)
T ss_dssp HHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEET
T ss_pred HHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence 3445555555445677777777777788887766 4677776653
No 395
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=42.16 E-value=64 Score=21.76 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=26.5
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhc
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRA 39 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~ 39 (105)
++.+.+.+..+.+.+-|+=+.|+.++++.++++++.
T Consensus 103 ~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~ 138 (472)
T 3hmu_A 103 ALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRT 138 (472)
T ss_dssp HHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 456667777665677777777777778999998874
No 396
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=42.07 E-value=27 Score=20.14 Aligned_cols=12 Identities=17% Similarity=0.263 Sum_probs=9.8
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 57 ~~~d~vi~~ag~ 68 (202)
T 3d7l_A 57 GKVDAIVSATGS 68 (202)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999873
No 397
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=41.99 E-value=39 Score=22.35 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=23.6
Q ss_pred CCCcEEE-EccCC-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSF-DCAGF-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vi-d~~g~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+ |.-|. ...+..++++++++|.+.+..
T Consensus 130 ~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 130 RYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp TCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 4689776 44454 345788999999999776653
No 398
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=41.62 E-value=27 Score=23.16 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=25.6
Q ss_pred CCCcEEEEcc----C----C---hHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 15 TGIDVSFDCA----G----F---NKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 15 ~g~d~vid~~----g----~---~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
+.+|+|+-.. + . ...+..+.++|+++|+++++....
T Consensus 297 ~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 297 ARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred CCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 4688888641 1 1 134778899999999999986543
No 399
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=41.60 E-value=61 Score=20.05 Aligned_cols=41 Identities=20% Similarity=0.328 Sum_probs=25.6
Q ss_pred HHHHHHcCCCCcEEEEccCChH-----------------------HHHHHHHhhh-cCCEEEEEcC
Q 040104 7 EKIDKAMGTGIDVSFDCAGFNK-----------------------TMSTALSATR-AGGKVCLVGM 48 (105)
Q Consensus 7 ~~~~~~~~~g~d~vid~~g~~~-----------------------~~~~~~~~l~-~~G~~v~~g~ 48 (105)
+++.+.. +++|+.+++.|... ....+..+++ .+|+|+.++.
T Consensus 70 ~~~~~~~-g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS 134 (242)
T 4b79_A 70 QRLFEAL-PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIAS 134 (242)
T ss_dssp HHHHHHC-SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECC
T ss_pred HHHHHhc-CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 3333334 47999999988531 1233445554 4799999975
No 400
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=41.56 E-value=67 Score=20.70 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=21.9
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
..+|+|+.|++.....+.+..+++.| +-|.+
T Consensus 70 ~~~D~V~i~tp~~~h~~~~~~al~aG-k~V~~ 100 (362)
T 1ydw_A 70 PEIDALYVPLPTSLHVEWAIKAAEKG-KHILL 100 (362)
T ss_dssp TTCCEEEECCCGGGHHHHHHHHHTTT-CEEEE
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHCC-CeEEE
Confidence 46899999998877666677776654 44444
No 401
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=41.49 E-value=72 Score=20.83 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
++.+++.+..+.+.+-|+-+.|+.+++..+++++.
T Consensus 76 ~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~ 110 (430)
T 3i4j_A 76 EYAGRLARFVGLPTFRFWAVSGGSEATESAVKLAR 110 (430)
T ss_dssp HHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHH
Confidence 45566666666566777777777777888888875
No 402
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=41.29 E-value=21 Score=23.35 Aligned_cols=34 Identities=6% Similarity=0.018 Sum_probs=22.6
Q ss_pred CCcEEEEccCC-----hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 16 GIDVSFDCAGF-----NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 16 g~d~vid~~g~-----~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
.+|+|+-...- ...+..+.++|++||+++.+...
T Consensus 241 ~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 241 KFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 68988753211 23467899999999976555443
No 403
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=41.16 E-value=38 Score=20.40 Aligned_cols=12 Identities=42% Similarity=0.689 Sum_probs=9.8
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999999874
No 404
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=41.12 E-value=24 Score=21.70 Aligned_cols=11 Identities=27% Similarity=0.471 Sum_probs=9.4
Q ss_pred CCcEEEEccCC
Q 040104 16 GIDVSFDCAGF 26 (105)
Q Consensus 16 g~d~vid~~g~ 26 (105)
++|++|.++|.
T Consensus 87 ~iD~lv~nAg~ 97 (269)
T 2h7i_A 87 KLDGVVHSIGF 97 (269)
T ss_dssp CEEEEEECCCC
T ss_pred CceEEEECCcc
Confidence 79999999873
No 405
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=41.01 E-value=54 Score=20.70 Aligned_cols=31 Identities=16% Similarity=0.130 Sum_probs=22.9
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
..+|+|+.|++.....+.+..+++.| .-+.+
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~ 94 (319)
T 1tlt_A 64 ASCDAVFVHSSTASHFDVVSTLLNAG-VHVCV 94 (319)
T ss_dssp TTCSEEEECSCTTHHHHHHHHHHHTT-CEEEE
T ss_pred cCCCEEEEeCCchhHHHHHHHHHHcC-CeEEE
Confidence 46899999999877677777777765 43444
No 406
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.75 E-value=50 Score=18.81 Aligned_cols=32 Identities=9% Similarity=0.132 Sum_probs=21.3
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCC---EEEEE
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGG---KVCLV 46 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G---~~v~~ 46 (105)
.++|++|.++++..........++..| .++..
T Consensus 104 ~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 104 GHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 478999999998765555555555544 55544
No 407
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=40.54 E-value=19 Score=23.16 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=24.8
Q ss_pred CCCcEEEEcc----CC-------hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 15 TGIDVSFDCA----GF-------NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g~d~vid~~----g~-------~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
+.+|+|+-.. |. ...+..+.++|++||+++++...
T Consensus 260 ~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 260 GRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 3688888642 11 23477888999999999998643
No 408
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=40.53 E-value=47 Score=18.77 Aligned_cols=8 Identities=13% Similarity=0.302 Sum_probs=3.7
Q ss_pred CEEEEEcC
Q 040104 41 GKVCLVGM 48 (105)
Q Consensus 41 G~~v~~g~ 48 (105)
|.++.+-.
T Consensus 63 gvliLtDl 70 (144)
T 3lfh_A 63 EIIIVVDL 70 (144)
T ss_dssp EEEEEESS
T ss_pred cEEEEEeC
Confidence 45554433
No 409
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=40.52 E-value=9.5 Score=23.73 Aligned_cols=32 Identities=19% Similarity=0.384 Sum_probs=23.3
Q ss_pred CcEEEEccCC----------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 17 IDVSFDCAGF----------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 17 ~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+|+|+-...- ...+....++|+|||++++.+.
T Consensus 175 fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 175 ADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 8888864221 1246778899999999999853
No 410
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=39.97 E-value=79 Score=20.87 Aligned_cols=43 Identities=16% Similarity=-0.049 Sum_probs=28.1
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHh---hhcCCEEEEEc
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGGKVCLVG 47 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~G~~v~~g 47 (105)
.+.+.+.+..+ +.+-++=+.|+.+++..++.+ +..++.++...
T Consensus 101 ~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~ 146 (453)
T 2cy8_A 101 RWAERIVAAFP-SIRKLRFTGSGTETTLLALRVARAFTGRRMILRFE 146 (453)
T ss_dssp HHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred HHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 34455555554 677777777777778888887 55566666653
No 411
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=39.96 E-value=43 Score=18.51 Aligned_cols=22 Identities=14% Similarity=-0.004 Sum_probs=10.1
Q ss_pred CcEEEEccCChHHHHHHHHhhhc
Q 040104 17 IDVSFDCAGFNKTMSTALSATRA 39 (105)
Q Consensus 17 ~d~vid~~g~~~~~~~~~~~l~~ 39 (105)
+=+..|-.|+.. ++.+..++..
T Consensus 61 vliLtDl~GGSp-~n~a~~~~~~ 82 (135)
T 1pdo_A 61 VLFLVDTWGGSP-FNAASRIVVD 82 (135)
T ss_dssp EEEEESSTTSHH-HHHHHHHHTT
T ss_pred EEEEEECCCCCH-HHHHHHHHhc
Confidence 334445445444 4445554443
No 412
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=39.90 E-value=41 Score=22.52 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=25.8
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHh---hhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~G 41 (105)
.++++++..|..+++.+|+-++-. .+++..+ |.+.|
T Consensus 202 ~v~avR~a~g~d~~l~vDaN~~~~-~~~A~~~~~~L~~~~ 240 (410)
T 3dip_A 202 PFRKIRAAVGQRIEIMCELHSLWG-THAAARICNALADYG 240 (410)
T ss_dssp HHHHHHHHHTTSSEEEEECTTCBC-HHHHHHHHHHGGGGT
T ss_pred HHHHHHHHcCCCceEEEECCCCCC-HHHHHHHHHHHHhcC
Confidence 456778777878999999988876 6666554 44544
No 413
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=39.64 E-value=63 Score=21.79 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
++.+++.+..+.+.+-++=+.|+.+++..++++++
T Consensus 101 ~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~ 135 (476)
T 3i5t_A 101 RLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSE 135 (476)
T ss_dssp HHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHH
Confidence 45566666655567777777777777888988886
No 414
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=39.23 E-value=80 Score=20.69 Aligned_cols=42 Identities=12% Similarity=-0.142 Sum_probs=27.8
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHh---hhcCCEEEEE
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGGKVCLV 46 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~G~~v~~ 46 (105)
++.+.+.+..+ +.+-++=+.|+.+++..++++ +..++.++..
T Consensus 100 ~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~ 144 (434)
T 2epj_A 100 LLAEKILGYVK-RGGMIRFVNSGTEATMTAIRLARGYTGRDLILKF 144 (434)
T ss_dssp HHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 44555666554 577777777777768888886 5556666655
No 415
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=39.18 E-value=39 Score=23.18 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=16.1
Q ss_pred HHHHHHHhhhcCCEEEEEcC
Q 040104 29 TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+..+.++|++||+++...+
T Consensus 211 iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 211 LLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp HHHHHHTTEEEEEEEEEEES
T ss_pred HHHHHHHhcCCCcEEEEEec
Confidence 46788899999999986544
No 416
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=39.10 E-value=45 Score=17.77 Aligned_cols=45 Identities=4% Similarity=0.036 Sum_probs=23.1
Q ss_pred HHHHHHHHcCCCCcEEEEccCChH-------HHHHHHHhhhcCCEEEEEcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNK-------TMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~-------~~~~~~~~l~~~G~~v~~g~~ 49 (105)
+.+.+.+...+.-.+|+|+.+.+. .+....+-++.|++++..|..
T Consensus 35 l~~~l~~~~~~~~~vilDl~~v~~iDssgl~~L~~~~~~~~~g~~l~l~~~~ 86 (118)
T 3ny7_A 35 LFTDLESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVE 86 (118)
T ss_dssp HHHHHHTTCTTCSEEEEEEEECCCBCHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred HHHHHHHhcCCCcEEEEEcCCCCeecHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 344444433223346777654432 355555555556677776653
No 417
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=39.09 E-value=76 Score=20.40 Aligned_cols=41 Identities=2% Similarity=-0.039 Sum_probs=25.6
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
..+.+.+..+.. +.++=+.|+..+++.++..+.++.+++..
T Consensus 40 ~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~~~gd~vi~~ 80 (379)
T 3ke3_A 40 LLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQLTIDEDCLII 80 (379)
T ss_dssp HHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhCCCCCeEEEE
Confidence 344455555433 55555556566688888888887777665
No 418
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=39.03 E-value=42 Score=22.44 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=23.8
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
.++++++..|..+++.+|+-+.-. ..+++++++
T Consensus 210 ~v~avR~a~G~~~~l~vDan~~~~-~~~A~~~~~ 242 (421)
T 4hnl_A 210 MFAAIKEKYGNQFQMLHDVHERLH-PNQAIQFAK 242 (421)
T ss_dssp HHHHHHHHHTTSSEEEEECTTCSC-HHHHHHHHH
T ss_pred HHHHHHHHhCCCceEeccccccCC-HHHHHHHHH
Confidence 346677777888999999988765 555555543
No 419
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=38.90 E-value=78 Score=20.51 Aligned_cols=71 Identities=17% Similarity=0.143 Sum_probs=45.1
Q ss_pred CCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCCCCccccch---hh----hhcCeEEEEeec--cC-CCHHHHHHHH
Q 040104 15 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---PA----AAREVDVVGVFR--YK-NTWPLCLEFL 84 (105)
Q Consensus 15 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~i~~~~~--~~-~~~~~~~~~v 84 (105)
..+|+|+-|++.....+.+..+|+.| .-|.+- .|...+.. .+ -.+++.+.-.+. +. ..+.++.+++
T Consensus 87 ~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~E---KPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~i 162 (361)
T 3u3x_A 87 ENIGLIVSAAVSSERAELAIRAMQHG-KDVLVD---KPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELV 162 (361)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEE---SCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHHH
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEe---CCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHHH
Confidence 46999999999888777888888765 545542 22323322 22 123444433322 23 6788999999
Q ss_pred HcCCC
Q 040104 85 RSGKI 89 (105)
Q Consensus 85 ~~g~i 89 (105)
.+|.+
T Consensus 163 ~~g~i 167 (361)
T 3u3x_A 163 AAGAI 167 (361)
T ss_dssp HTTTT
T ss_pred HcCCC
Confidence 99987
No 420
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=38.78 E-value=44 Score=21.91 Aligned_cols=33 Identities=12% Similarity=0.246 Sum_probs=24.0
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
.++++++..|..+++.+|+-++-. ..++.+.++
T Consensus 177 ~v~avr~~~g~~~~l~vDaN~~~~-~~~A~~~~~ 209 (378)
T 4hpn_A 177 VIAAVREAIGPDMRLMIDANHGYT-VTEAITLGD 209 (378)
T ss_dssp HHHHHHHHHTTTSEEEEECTTCCC-HHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEEEecCcccC-HHHHHHHHh
Confidence 456777777778999999988766 566655544
No 421
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=38.67 E-value=30 Score=21.86 Aligned_cols=18 Identities=17% Similarity=0.268 Sum_probs=11.8
Q ss_pred HHHHHHcCCCCcEEEEccC
Q 040104 7 EKIDKAMGTGIDVSFDCAG 25 (105)
Q Consensus 7 ~~~~~~~~~g~d~vid~~g 25 (105)
+++.+.. +++|++|.++|
T Consensus 125 ~~~~~~~-g~iD~lVnnAg 142 (319)
T 2ptg_A 125 EAVRADV-GQIDILVHSLA 142 (319)
T ss_dssp HHHHHHH-SCEEEEEEEEE
T ss_pred HHHHHHc-CCCCEEEECCc
Confidence 3343333 37999999876
No 422
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=38.61 E-value=50 Score=21.45 Aligned_cols=31 Identities=16% Similarity=0.137 Sum_probs=20.1
Q ss_pred CCCcEEEEccCChH----HHHHHHHhhhcCCEEEE
Q 040104 15 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCL 45 (105)
Q Consensus 15 ~g~d~vid~~g~~~----~~~~~~~~l~~~G~~v~ 45 (105)
..+|+|+||+++.. ..+.+..+|+.|=.++.
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~ 113 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVT 113 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEE
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEe
Confidence 46899999996543 25666666666555444
No 423
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=38.58 E-value=66 Score=19.55 Aligned_cols=12 Identities=25% Similarity=0.446 Sum_probs=10.1
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 85 g~id~lv~~Ag~ 96 (267)
T 2gdz_A 85 GRLDILVNNAGV 96 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 424
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=38.38 E-value=67 Score=21.17 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=23.8
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
++.+.+.+..+.+.+-++=+.|+.++++.+++++.
T Consensus 97 ~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~ 131 (449)
T 3a8u_X 97 QLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVR 131 (449)
T ss_dssp HHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHH
Confidence 34455555555467777777777777888888775
No 425
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=38.26 E-value=45 Score=22.08 Aligned_cols=33 Identities=18% Similarity=0.405 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSAT 37 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l 37 (105)
+.++++++..|..+++.+|+-++-. .+++.+++
T Consensus 203 e~v~avR~a~G~d~~l~vDan~~~~-~~~a~~~~ 235 (407)
T 2o56_A 203 DRMAAIRDAVGPDVDIIAEMHAFTD-TTSAIQFG 235 (407)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCC-HHHHHHHH
Confidence 4556777777778999999887754 45444443
No 426
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=38.07 E-value=22 Score=22.37 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=22.2
Q ss_pred CCcEEEEccC------C----hHHHHHHHHhhhcCCEEEEE
Q 040104 16 GIDVSFDCAG------F----NKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 16 g~d~vid~~g------~----~~~~~~~~~~l~~~G~~v~~ 46 (105)
.+|+|+-... + ...+..+.++|+|||.++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 6888886422 1 13577788899999998865
No 427
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=37.93 E-value=73 Score=19.91 Aligned_cols=40 Identities=18% Similarity=0.163 Sum_probs=20.8
Q ss_pred HHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 6 VEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 6 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
...++++...++|+++ +++.+. ...+....+ .--++..|.
T Consensus 59 ~~~~~~l~~~~~DlIi-ai~t~a-a~a~~~~~~-~iPVVf~~v 98 (302)
T 3lkv_A 59 VQIARQFVGENPDVLV-GIATPT-AQALVSATK-TIPIVFTAV 98 (302)
T ss_dssp HHHHHHHHTTCCSEEE-EESHHH-HHHHHHHCS-SSCEEEEEE
T ss_pred HHHHHHHHhcCCcEEE-EcCCHH-HHHHHhhcC-CCCeEEEec
Confidence 3444455567889877 456554 444444433 333444444
No 428
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=37.36 E-value=70 Score=19.51 Aligned_cols=37 Identities=5% Similarity=0.027 Sum_probs=26.3
Q ss_pred CCCCcEEEEccCChHHHHHHHHhhhcCC--EEEEEcCCC
Q 040104 14 GTGIDVSFDCAGFNKTMSTALSATRAGG--KVCLVGMGH 50 (105)
Q Consensus 14 ~~g~d~vid~~g~~~~~~~~~~~l~~~G--~~v~~g~~~ 50 (105)
..|++.++++......+....++.+..+ .+..+|..+
T Consensus 31 ~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~i~~~~GihP 69 (272)
T 2y1h_A 31 KANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHP 69 (272)
T ss_dssp HTTEEEEEECCSSGGGHHHHHHHHHHTTTTEEEEECCCS
T ss_pred HCCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEEECC
Confidence 3589999998666555777777776654 566778754
No 429
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=37.26 E-value=53 Score=21.73 Aligned_cols=38 Identities=13% Similarity=0.099 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCCE
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGGK 42 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G~ 42 (105)
+.++++++..|..+++.+|+-++-. .+++. +.|.+.+.
T Consensus 189 e~v~avR~~~g~d~~l~vDan~~~~-~~~ai~~~~~l~~~~i 229 (392)
T 3p3b_A 189 AIVRGISEVAGPAGKIMIDANNAYN-LNLTKEVLAALSDVNL 229 (392)
T ss_dssp HHHHHHHHHHCTTCCEEEECTTCCC-HHHHHHHHHHTTTSCE
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCC-HHHHHHHHHHHHhcCC
Confidence 3456677767778999999987754 45444 44555554
No 430
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=37.12 E-value=11 Score=24.47 Aligned_cols=33 Identities=15% Similarity=0.093 Sum_probs=26.4
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.+|++|-++|.+..+. -+++++|..++.+|...
T Consensus 208 ~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 208 KGDILVVATGQPEMVK--GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp TCSEEEECCCCTTCBC--GGGSCTTCEEEECCCBC
T ss_pred cCCEEEECCCCcccCC--HHHcCCCcEEEEccCCC
Confidence 6899999999987333 34589999999999753
No 431
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=37.04 E-value=23 Score=22.65 Aligned_cols=30 Identities=17% Similarity=0.240 Sum_probs=22.2
Q ss_pred CcEEE-Ecc--CChHHHHHHHHhhhcCCEEEEE
Q 040104 17 IDVSF-DCA--GFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 17 ~d~vi-d~~--g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
+|.++ |.+ .-...+....++|+|||+++.+
T Consensus 152 fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 152 PSFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 78654 332 1244689999999999999987
No 432
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=36.88 E-value=57 Score=21.47 Aligned_cols=36 Identities=17% Similarity=0.105 Sum_probs=24.0
Q ss_pred CCCCcEEEEccCC---------------hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 14 GTGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 14 ~~g~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
+..+|+|+-..+. ...+..++.+|+++|.++....+
T Consensus 291 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 291 GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3578887754321 23466788999999988876543
No 433
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=36.64 E-value=49 Score=22.21 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=24.7
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
.++++++..|..+++.+|+-++-. .+++. +.|.+.|
T Consensus 219 ~v~avReavG~d~~L~vDaN~~~~-~~~Ai~~~~~Le~~~ 257 (412)
T 3stp_A 219 RVEAVREVIGYDNDLMLECYMGWN-LDYAKRMLPKLAPYE 257 (412)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCSC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHcCCCCeEEEECCCCCC-HHHHHHHHHHHHhcC
Confidence 456777777778999999887765 55554 4455544
No 434
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=36.53 E-value=55 Score=21.75 Aligned_cols=35 Identities=14% Similarity=0.104 Sum_probs=24.6
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG 40 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~ 40 (105)
.++++++..+..+++.+|+-+.-. ..++.++++.-
T Consensus 190 ~v~avR~a~g~~~~l~vDaN~~w~-~~~A~~~~~~L 224 (392)
T 3v5c_A 190 IVRGISEVAGPAGKIMIDANNAYN-LNLTKEVLAAL 224 (392)
T ss_dssp HHHHHHHHHCTTCCEEEECTTCCC-HHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCcEEeeCCCCcC-HHHHHHHHHhc
Confidence 346677766778999999988876 66665555443
No 435
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=36.22 E-value=20 Score=21.03 Aligned_cols=31 Identities=10% Similarity=0.069 Sum_probs=20.7
Q ss_pred CCcEEEEccCC-----h---HHHHHHHHhhhcCCEEEEE
Q 040104 16 GIDVSFDCAGF-----N---KTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 16 g~d~vid~~g~-----~---~~~~~~~~~l~~~G~~v~~ 46 (105)
.+|+|++...- + ..+....++|+|||+++.+
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 58888873211 1 1367789999999994444
No 436
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=36.21 E-value=18 Score=21.47 Aligned_cols=34 Identities=9% Similarity=0.064 Sum_probs=24.1
Q ss_pred CCCcEEEEcc-----CCh---HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCA-----GFN---KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-.- ..+ ..+..+.++|+|||++++.-.
T Consensus 108 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 108 EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 3578777542 222 257889999999999998753
No 437
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=35.97 E-value=71 Score=19.28 Aligned_cols=21 Identities=33% Similarity=0.607 Sum_probs=13.4
Q ss_pred HHHHHHHcCC-CCcEEEEccCC
Q 040104 6 VEKIDKAMGT-GIDVSFDCAGF 26 (105)
Q Consensus 6 ~~~~~~~~~~-g~d~vid~~g~ 26 (105)
.+.+.+..+. ++|++|.++|.
T Consensus 91 ~~~~~~~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 91 VADIEGVTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHHHHHHHGGGCCSEEEECCCC
T ss_pred HHHHHHhcCCCCccEEEECCCc
Confidence 3344443342 79999999874
No 438
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=35.96 E-value=52 Score=21.97 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
+.++++++..|..+.+.+|+-++-. .++++++++
T Consensus 201 e~v~avR~avG~d~~l~vDaN~~~~-~~~A~~~~~ 234 (409)
T 3go2_A 201 AHLEALRDGAGPDVEILLDLNFNAK-PEGYLKILR 234 (409)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCC-HHHHHHHHH
Confidence 4567788887888999999887765 565554443
No 439
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=35.91 E-value=49 Score=17.30 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=26.4
Q ss_pred hHHHHHHHHHcCCCCcEEEEccCChH-------HHHHHHHhhh-cCCEEEEEcCC
Q 040104 3 AEEVEKIDKAMGTGIDVSFDCAGFNK-------TMSTALSATR-AGGKVCLVGMG 49 (105)
Q Consensus 3 ~~~~~~~~~~~~~g~d~vid~~g~~~-------~~~~~~~~l~-~~G~~v~~g~~ 49 (105)
+.+.+.+.+....+..+++|+.+-.. .+....+.++ .|+++...|..
T Consensus 29 ~~l~~~l~~~~~~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~ 83 (117)
T 4hyl_A 29 PAVQAAVLPRVTAKGKMILDLREVSYMSSAGLRVLLSLYRHTSNQQGALVLVGVS 83 (117)
T ss_dssp HHHHHHHGGGCCTTCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHccCCeEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 44555666555332378888765432 2444444444 56778777754
No 440
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=35.88 E-value=55 Score=21.16 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHH---HHhhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTA---LSATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~---~~~l~~~G 41 (105)
+.++++++..|..+++.+|+-+.-+ ..++ ++.|.+.+
T Consensus 112 ~~v~avR~~~G~~~~L~vDaN~~w~-~~~A~~~~~~L~~~~ 151 (327)
T 2opj_A 112 ARVEAVRDALGPRGRVRIDVNGAWD-VDTAVRMIRLLDRFE 151 (327)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCC-HHHHHHHHHHHHhcC
Confidence 3456677777778999999888755 4444 44455544
No 441
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.84 E-value=75 Score=19.40 Aligned_cols=12 Identities=25% Similarity=0.376 Sum_probs=9.5
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 85 g~id~lv~~Ag~ 96 (278)
T 1spx_A 85 GKLDILVNNAGA 96 (278)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 379999999874
No 442
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=35.75 E-value=72 Score=19.19 Aligned_cols=12 Identities=33% Similarity=0.188 Sum_probs=9.5
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 74 g~id~lv~nAg~ 85 (247)
T 3dii_A 74 QRIDVLVNNACR 85 (247)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 379999999874
No 443
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=35.66 E-value=77 Score=19.45 Aligned_cols=12 Identities=42% Similarity=0.742 Sum_probs=10.2
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 100 g~iD~lvnnAg~ 111 (266)
T 3grp_A 100 EGIDILVNNAGI 111 (266)
T ss_dssp TSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 444
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=35.61 E-value=33 Score=22.56 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=25.0
Q ss_pred CCCCcEEEEccCC---------------hHHHHHHHHhhhcCCEEEEEcCC
Q 040104 14 GTGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMG 49 (105)
Q Consensus 14 ~~g~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~ 49 (105)
+..+|+|+-..+. ...+..++.+|+++|.++.....
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3578987753221 22467889999999998887654
No 445
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=35.53 E-value=78 Score=19.51 Aligned_cols=12 Identities=42% Similarity=0.589 Sum_probs=10.0
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 101 g~iD~lVnnAg~ 112 (272)
T 4dyv_A 101 GRVDVLFNNAGT 112 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 446
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=35.47 E-value=52 Score=21.86 Aligned_cols=37 Identities=16% Similarity=0.335 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
+.++++++..|..+++.+|+-++-. ..++. +.|.+.|
T Consensus 187 ~~v~avReavG~d~~l~vDaN~~~~-~~~A~~~~~~l~~~~ 226 (388)
T 3tcs_A 187 EIIPTMRRELGDDVDLLIDANSCYT-PDRAIEVGHMLQDHG 226 (388)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCC-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCcC-HHHHHHHHHHHhhcC
Confidence 4567788888888999999887765 55544 4455554
No 447
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=35.41 E-value=54 Score=21.69 Aligned_cols=38 Identities=26% Similarity=0.375 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHH---HHhhhcCCE
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTA---LSATRAGGK 42 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~---~~~l~~~G~ 42 (105)
+.++++++..|..+++.+|+-++-. .+++ .+.|.+.|.
T Consensus 197 e~v~avr~avG~d~~l~vDan~~~~-~~~ai~~~~~l~~~~i 237 (403)
T 2ox4_A 197 ERVEAIRNAVGPDVDIIVENHGHTD-LVSAIQFAKAIEEFNI 237 (403)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHHHHHGGGCE
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCC-HHHHHHHHHHHHhhCC
Confidence 4556777777778999999887754 4444 444555554
No 448
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=35.36 E-value=52 Score=21.80 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=25.2
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHH---HHHhhhcCCE
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMST---ALSATRAGGK 42 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~---~~~~l~~~G~ 42 (105)
+.++++++..|..+++.+|+-++-. .++ ..+.|.+.|.
T Consensus 206 e~v~avR~a~G~d~~l~vDan~~~~-~~~ai~~~~~l~~~~i 246 (410)
T 2gl5_A 206 ARIAAMREAMGDDADIIVEIHSLLG-TNSAIQFAKAIEKYRI 246 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSC-HHHHHHHHHHHGGGCE
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCC-HHHHHHHHHHHHhcCC
Confidence 4556777777778899999877654 444 4444555554
No 449
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=35.22 E-value=58 Score=21.47 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=24.5
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHH---hhhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALS---ATRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~---~l~~~G 41 (105)
.++++++..|..+++.+|+-+.-. ..++.+ .|.+.+
T Consensus 182 ~v~avR~a~g~~~~l~vDaN~~~~-~~~A~~~~~~l~~~~ 220 (381)
T 3fcp_A 182 HTRAIVEALGDRASIRVDVNQAWD-AATGAKGCRELAAMG 220 (381)
T ss_dssp HHHHHHHHTCTTCEEEEECTTCBC-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCeEEEECCCCCC-HHHHHHHHHHHhhcC
Confidence 456777777778999999888765 455444 445544
No 450
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=35.21 E-value=53 Score=22.08 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhh
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATR 38 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~ 38 (105)
.++++++..|..+++.+|+-+.-. ..++.++++
T Consensus 199 ~v~avRea~G~~~~L~vDaN~~w~-~~~A~~~~~ 231 (404)
T 3ekg_A 199 ELATMRERVGPDFWLMFDCWMSLD-LNYATRLAR 231 (404)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCC-HHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEecCCCCCC-HHHHHHHHH
Confidence 456777777888999999988766 565554443
No 451
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=34.90 E-value=54 Score=22.07 Aligned_cols=36 Identities=8% Similarity=-0.043 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHh---hhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~G 41 (105)
.++++++..|..+++.+|+-++-. .+++..+ |.+.|
T Consensus 211 ~v~avR~avG~d~~L~vDaN~~~~-~~~A~~~~~~Le~~~ 249 (422)
T 3tji_A 211 MFHALREKYGWKLHILHDVHERLF-PQQAVQLAKQLEPFQ 249 (422)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCSC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHcCCCCEEEEECCCCCC-HHHHHHHHHHHHhhC
Confidence 457778777878999999987765 5555544 44544
No 452
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=34.83 E-value=62 Score=21.40 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHH---hhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALS---ATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~---~l~~~G 41 (105)
+.++++++..|..+.+.+|+-++-. .+++.+ .|.+.|
T Consensus 195 e~v~avR~avg~d~~l~vDan~~~~-~~~a~~~~~~l~~~~ 234 (393)
T 2og9_A 195 ARVTAVRKHLGDAVPLMVDANQQWD-RPTAQRMCRIFEPFN 234 (393)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCC-HHHHHHHHHHHHhhC
Confidence 4567777777778899999877754 444444 444444
No 453
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=34.81 E-value=71 Score=18.78 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=20.1
Q ss_pred CCCcEEEEccCChH------HHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAGFNK------TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-...... .+... ++|+|||.++.-..
T Consensus 133 ~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred CceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 47998875332222 11122 68999999987544
No 454
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=34.77 E-value=59 Score=22.30 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG 40 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~ 40 (105)
.++++++..|..+++.+|+-+.-. ...++++++.-
T Consensus 205 rv~avRea~G~d~~L~vDaN~~wt-~~~Ai~~~~~L 239 (455)
T 3fxg_A 205 FLRKHREAVGPDFPIMVDCYMSLN-VSYTIELVKAC 239 (455)
T ss_dssp HHHHHHHHHCSSSCEEEECTTCCC-HHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCC-HHHHHHHHHhc
Confidence 356777777888999999988766 56666555443
No 455
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=34.55 E-value=28 Score=22.36 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=24.3
Q ss_pred CCcEEEEc-----cCCh---HHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDC-----AGFN---KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|+|+-. ...+ ..+..+.++|+|||++++.-.
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 68887753 2222 458889999999999998754
No 456
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=34.54 E-value=71 Score=20.73 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=22.5
Q ss_pred CCCCcEEE-EccCC---h--------HHHHHHHHhhhcC-CEEEEE
Q 040104 14 GTGIDVSF-DCAGF---N--------KTMSTALSATRAG-GKVCLV 46 (105)
Q Consensus 14 ~~g~d~vi-d~~g~---~--------~~~~~~~~~l~~~-G~~v~~ 46 (105)
+..+|+|+ |...+ . .+++-+...|++| |.+|.=
T Consensus 145 ~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 145 TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 45789887 44433 2 2455667899999 998864
No 457
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=34.52 E-value=33 Score=21.76 Aligned_cols=33 Identities=15% Similarity=0.078 Sum_probs=24.4
Q ss_pred CCcEEEEc-----cCC---hHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|+|+-. ... ...+..+.++|+|||++++.-.
T Consensus 235 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 235 GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 68888752 222 2358889999999999998754
No 458
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=34.50 E-value=73 Score=18.87 Aligned_cols=12 Identities=33% Similarity=0.423 Sum_probs=10.2
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 61 ~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 61 GVLDGLVCCAGV 72 (255)
T ss_dssp TCCSEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 589999999875
No 459
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=34.48 E-value=1e+02 Score=20.48 Aligned_cols=33 Identities=9% Similarity=-0.029 Sum_probs=22.7
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
++|+||.|+|..........+++.+-.++.++.
T Consensus 76 ~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 76 KPQIVLNIALPYQDLTIMEACLRTGVPYLDTAN 108 (405)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred CCCEEEECCCcccChHHHHHHHHhCCCEEEecC
Confidence 589999999865544555666666666665543
No 460
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.39 E-value=81 Score=19.36 Aligned_cols=12 Identities=33% Similarity=0.415 Sum_probs=10.1
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 104 g~id~lvnnAg~ 115 (280)
T 3pgx_A 104 GRLDVVVANAGV 115 (280)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 461
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=34.26 E-value=31 Score=22.48 Aligned_cols=20 Identities=20% Similarity=0.255 Sum_probs=17.2
Q ss_pred HHHHHHHhhhcCCEEEEEcC
Q 040104 29 TMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~~g~ 48 (105)
.+..+.++|+|||+++++-.
T Consensus 282 ~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 282 LLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp HHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEEEEe
Confidence 47889999999999998754
No 462
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=34.01 E-value=56 Score=21.99 Aligned_cols=36 Identities=14% Similarity=0.022 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHh---hhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~G 41 (105)
.++++++..|..+.+.+|+-++-. .+++.++ |.+.|
T Consensus 215 ~v~avR~avG~d~~l~vDaN~~~~-~~~A~~~~~~L~~~~ 253 (424)
T 3v3w_A 215 VFAAVRKEFGPDIHLLHDVHHRLT-PIEAARLGKALEPYH 253 (424)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHcCCCCcEEEeCCCCCC-HHHHHHHHHHHHhcC
Confidence 456778877878999999887765 5555444 55544
No 463
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=33.99 E-value=70 Score=18.46 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=23.5
Q ss_pred CCCcEEEEccCCh--------HHHHHHHHhhhcC--CEEEEEcC
Q 040104 15 TGIDVSFDCAGFN--------KTMSTALSATRAG--GKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g~~--------~~~~~~~~~l~~~--G~~v~~g~ 48 (105)
.++|++|.++|.. ......++.++.. ++++.++.
T Consensus 60 ~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 60 SDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp TTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred cCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4799999999874 2245566666654 68887764
No 464
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=33.99 E-value=57 Score=21.68 Aligned_cols=36 Identities=8% Similarity=0.014 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHh---hhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~G 41 (105)
.++++++..|..+.+.+|+-++-. .+++.++ |.+.|
T Consensus 190 ~v~avR~a~G~d~~l~vDan~~~~-~~~A~~~~~~L~~~~ 228 (401)
T 3sbf_A 190 MFKSLREKYGNQFHILHDVHERLF-PNQAIQFAKEVEQYK 228 (401)
T ss_dssp HHHHHHHHHTTSSEEEEECTTCSC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHcCCCCEEEEECCCCCC-HHHHHHHHHHHHhcC
Confidence 456778877888999999988765 5555544 44444
No 465
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=33.88 E-value=60 Score=21.49 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=24.7
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
.++++++..|..+++.+|+-++-. ..++. +.|.+.|
T Consensus 202 ~v~avR~a~G~~~~l~vDaN~~~~-~~~A~~~~~~l~~~~ 240 (383)
T 3toy_A 202 MIKGLRALLGPDIALMLDFNQSLD-PAEATRRIARLADYD 240 (383)
T ss_dssp HHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCC-HHHHHHHHHHHHhhC
Confidence 456777777778999999887765 55544 4445544
No 466
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=33.81 E-value=56 Score=21.97 Aligned_cols=37 Identities=11% Similarity=0.014 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHH---hhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALS---ATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~---~l~~~G 41 (105)
+.++++++..|..+.+.+|+-++-. .+++.+ .|.+.|
T Consensus 215 e~v~avR~a~G~d~~l~vDaN~~~~-~~~A~~~~~~L~~~~ 254 (425)
T 3vcn_A 215 KLFERAREVLGWDVHLLHDVHHRLT-PIEAARLGKDLEPYR 254 (425)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCC-HHHHHHHHHHHHhcC
Confidence 3567788888878999999887755 555544 455544
No 467
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=33.61 E-value=13 Score=24.33 Aligned_cols=33 Identities=12% Similarity=0.053 Sum_probs=25.1
Q ss_pred CCcEEEEccCChHH-HHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKT-MSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.+|+||-++|.+.. +.. +++++|..++.+|.+.
T Consensus 245 ~ADIVIsAtg~p~~vI~~--e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 245 DSDVVITGVPSENYKFPT--EYIKEGAVCINFACTK 278 (320)
T ss_dssp HCSEEEECCCCTTCCBCT--TTSCTTEEEEECSSSC
T ss_pred cCCEEEECCCCCcceeCH--HHcCCCeEEEEcCCCc
Confidence 47999999999873 332 3478888888898764
No 468
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=33.57 E-value=65 Score=21.39 Aligned_cols=37 Identities=8% Similarity=0.049 Sum_probs=25.5
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
+.++++++..|..+++.+|+-++-. ..++. +.|.+.|
T Consensus 187 ~~v~avR~a~g~~~~l~vDaN~~~~-~~~A~~~~~~L~~~~ 226 (392)
T 3ddm_A 187 RNALHVRELLGAATPLMADANQGWD-LPRARQMAQRLGPAQ 226 (392)
T ss_dssp HHHHHHHHHHCSSSCEEEECTTCCC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCCCceEEEeCCCCCC-HHHHHHHHHHHHHhC
Confidence 3457777777878999999887765 55554 4455544
No 469
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=33.52 E-value=63 Score=21.36 Aligned_cols=34 Identities=12% Similarity=0.196 Sum_probs=24.1
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHH---hhhc
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALS---ATRA 39 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~---~l~~ 39 (105)
.++++++..|..+++.+|+-++-. ..++.+ .|.+
T Consensus 175 ~v~avR~a~g~~~~L~vDaN~~w~-~~~A~~~~~~l~~ 211 (379)
T 3r0u_A 175 LLKALDNEFSKNIKFRFDANQGWN-LAQTKQFIEEINK 211 (379)
T ss_dssp HHHHHHHHCCTTSEEEEECTTCCC-HHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCeEEEeCCCCcC-HHHHHHHHHHHhh
Confidence 456777777778999999888766 555544 4555
No 470
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=33.49 E-value=59 Score=21.82 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=25.0
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHH---hhhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALS---ATRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~---~l~~~G 41 (105)
.++++++..|..+.+.+|+-++-. .+++.+ .|.+.|
T Consensus 209 ~v~avR~a~G~d~~l~vDaN~~~~-~~~A~~~~~~L~~~~ 247 (418)
T 3r4e_A 209 LFEELRKTYGFDHHLLHDGHHRYT-PQEAANLGKMLEPYQ 247 (418)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCSC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHcCCCCeEEEeCCCCCC-HHHHHHHHHHHHhhC
Confidence 456777777878999999887765 555544 455554
No 471
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=33.47 E-value=15 Score=22.18 Aligned_cols=17 Identities=6% Similarity=0.108 Sum_probs=15.2
Q ss_pred HHHHHHHhhhcCCEEEE
Q 040104 29 TMSTALSATRAGGKVCL 45 (105)
Q Consensus 29 ~~~~~~~~l~~~G~~v~ 45 (105)
.+....++|+|||++++
T Consensus 121 ~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 121 ILSNVADLAKKEAHFEF 137 (225)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEE
Confidence 47788899999999988
No 472
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=33.45 E-value=18 Score=21.32 Aligned_cols=19 Identities=11% Similarity=0.240 Sum_probs=16.0
Q ss_pred HHHHHHHHhhhcCCEEEEE
Q 040104 28 KTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 28 ~~~~~~~~~l~~~G~~v~~ 46 (105)
..+..+.++|+|||++++.
T Consensus 121 ~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 121 EMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp HHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEE
Confidence 4578899999999998873
No 473
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=33.45 E-value=59 Score=21.92 Aligned_cols=37 Identities=11% Similarity=-0.058 Sum_probs=26.9
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHh---hhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~G 41 (105)
+.++++++..|..+.+.+|+-++-. ..++.++ |.+.|
T Consensus 216 e~v~avR~a~G~d~~L~vDaN~~~~-~~~A~~~~~~L~~~~ 255 (426)
T 4e4f_A 216 KLFEAVRDKFGFNEHLLHDMHHRLT-PIEAARFGKSVEDYR 255 (426)
T ss_dssp HHHHHHHHHHTTSSEEEEECTTCSC-HHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCC-HHHHHHHHHHHhhcC
Confidence 3567888888888999999988765 5666555 44444
No 474
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=33.44 E-value=69 Score=19.98 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=20.6
Q ss_pred CCcEEEEccCChHHHHHHHH-------hhhcCCEEEEEc
Q 040104 16 GIDVSFDCAGFNKTMSTALS-------ATRAGGKVCLVG 47 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~-------~l~~~G~~v~~g 47 (105)
..|+||.|++.+..+...+. .++++..++..+
T Consensus 59 ~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~s 97 (302)
T 2h78_A 59 GADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECS 97 (302)
T ss_dssp TCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECC
Confidence 57899999887655666554 345555555543
No 475
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=33.44 E-value=59 Score=21.60 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=23.5
Q ss_pred HHHHHHHHHcCCCCcEEEEccCCh-HHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFN-KTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~ 38 (105)
+.++++++..|..+.+.+|+-++- . .+++.++++
T Consensus 193 e~v~avR~a~G~d~~l~vDaN~~~~~-~~~A~~~~~ 227 (394)
T 3mkc_A 193 YYLRELRGILGHDTDMMVDYLYRFTD-WYEVARLLN 227 (394)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCC-HHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCCC-HHHHHHHHH
Confidence 345677877787889999988766 4 555554443
No 476
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=33.30 E-value=61 Score=21.35 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHH---HHhhhcCCE
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTA---LSATRAGGK 42 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~---~~~l~~~G~ 42 (105)
+.++++++..|..+.+.+|+-++-. .+++ .+.|.+.|.
T Consensus 187 e~v~avr~a~G~d~~l~vD~n~~~~-~~~a~~~~~~l~~~~i 227 (392)
T 2poz_A 187 RRVKAVRDAAGPEIELMVDLSGGLT-TDETIRFCRKIGELDI 227 (392)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHHHHHGGGCE
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCC-HHHHHHHHHHHHhcCC
Confidence 3556677777778899999877654 4444 444555554
No 477
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=33.29 E-value=84 Score=19.20 Aligned_cols=12 Identities=25% Similarity=0.432 Sum_probs=10.1
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 101 g~id~lv~nAg~ 112 (278)
T 3sx2_A 101 GRLDIVVANAGI 112 (278)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 478
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=33.03 E-value=60 Score=21.53 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=23.4
Q ss_pred HHHHHHHHHcCCCCcEEEEccCCh-HHHHHHHHhhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFN-KTMSTALSATR 38 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~ 38 (105)
+.++++++..|..+.+.+|+-++- . .+++.++++
T Consensus 188 ~~v~avR~a~G~d~~l~vDan~~~~~-~~~A~~~~~ 222 (394)
T 3mqt_A 188 AYLRELREVIGWDMDMMVDCLYRWTD-WQKARWTFR 222 (394)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCSC-HHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCC-HHHHHHHHH
Confidence 345677877787889999988776 4 455544443
No 479
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=32.98 E-value=19 Score=21.17 Aligned_cols=35 Identities=11% Similarity=0.033 Sum_probs=21.0
Q ss_pred CC-CcEEEEccC-C----hHHHHHH--HHhhhcCCEEEEEcCC
Q 040104 15 TG-IDVSFDCAG-F----NKTMSTA--LSATRAGGKVCLVGMG 49 (105)
Q Consensus 15 ~g-~d~vid~~g-~----~~~~~~~--~~~l~~~G~~v~~g~~ 49 (105)
+. +|+|+-... . ...+... .++|+++|.+++...+
T Consensus 123 ~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 123 QPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp SCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 45 898885433 1 1224444 3358999999876543
No 480
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=32.93 E-value=14 Score=21.42 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=22.2
Q ss_pred CCCcEEEEc-cCC-hHHHHHHHHhhhcCCEEEEEc
Q 040104 15 TGIDVSFDC-AGF-NKTMSTALSATRAGGKVCLVG 47 (105)
Q Consensus 15 ~g~d~vid~-~g~-~~~~~~~~~~l~~~G~~v~~g 47 (105)
+.+|+|+-. ... ...+..+.++|++||.++..-
T Consensus 131 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 131 PPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SCEEEEECSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCcCEEEEeccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 357888742 122 234677788899999998873
No 481
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=32.88 E-value=88 Score=19.33 Aligned_cols=12 Identities=33% Similarity=0.462 Sum_probs=10.1
Q ss_pred CCCcEEEEccCC
Q 040104 15 TGIDVSFDCAGF 26 (105)
Q Consensus 15 ~g~d~vid~~g~ 26 (105)
+++|++|.++|.
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 482
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=32.87 E-value=1e+02 Score=20.13 Aligned_cols=43 Identities=9% Similarity=-0.079 Sum_probs=27.6
Q ss_pred HHHHHHHHHcCCCC-cEEEEccCChHHHHHHHHhh---hcCCEEEEE
Q 040104 4 EEVEKIDKAMGTGI-DVSFDCAGFNKTMSTALSAT---RAGGKVCLV 46 (105)
Q Consensus 4 ~~~~~~~~~~~~g~-d~vid~~g~~~~~~~~~~~l---~~~G~~v~~ 46 (105)
++.+.+.+..+.+. +-++=+.|+.+++..++.++ .+++.++..
T Consensus 90 ~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~ 136 (439)
T 3dxv_A 90 TLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAF 136 (439)
T ss_dssp HHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEE
T ss_pred HHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 44555666555456 56776677777688888874 455666654
No 483
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=32.85 E-value=69 Score=21.30 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=24.7
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
.++++++..|..+.+.+|+-++-. .+++. +.|.+.|
T Consensus 180 ~v~avR~a~g~~~~l~vDaN~~~~-~~~A~~~~~~L~~~~ 218 (393)
T 4dwd_A 180 KARAVRELLGPDAVIGFDANNGYS-VGGAIRVGRALEDLG 218 (393)
T ss_dssp HHHHHHHHHCTTCCEEEECTTCCC-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCeEEEECCCCCC-HHHHHHHHHHHHhhC
Confidence 456777777778999999887755 45544 4455555
No 484
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=32.82 E-value=92 Score=19.49 Aligned_cols=30 Identities=13% Similarity=0.014 Sum_probs=22.6
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEE
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLV 46 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 46 (105)
.+|+|+-|++.....+.+..+++.|-. +.+
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~ 95 (308)
T 3uuw_A 66 KCDCIFLHSSTETHYEIIKILLNLGVH-VYV 95 (308)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHTTCE-EEE
T ss_pred cCCEEEEeCCcHhHHHHHHHHHHCCCc-EEE
Confidence 689999999988877777777776544 444
No 485
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=32.80 E-value=65 Score=20.97 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=25.4
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
+.++++++..|..+.+.+|+-++-. .+++. +.|.+.|
T Consensus 171 ~~v~avR~a~g~~~~l~vDan~~~~-~~~a~~~~~~L~~~~ 210 (354)
T 3jva_A 171 ARVKAIREAVGFDIKLRLDANQAWT-PKDAVKAIQALADYQ 210 (354)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHcCCCCeEEEECCCCCC-HHHHHHHHHHHHhcC
Confidence 3557778777778899999887765 55544 4455555
No 486
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=32.72 E-value=61 Score=21.55 Aligned_cols=37 Identities=22% Similarity=0.401 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
+.++++++..|..+++.+|+-++-. .+++. +.|.+.|
T Consensus 198 e~v~avRea~G~d~~l~vDan~~~~-~~~a~~~~~~l~~~~ 237 (410)
T 2qq6_A 198 ARVAAVREAVGPEVEVAIDMHGRFD-IPSSIRFARAMEPFG 237 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCC-HHHHHHHHHHHhhcC
Confidence 4556777777778899999887754 44444 4455544
No 487
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=32.65 E-value=64 Score=21.16 Aligned_cols=37 Identities=22% Similarity=0.234 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHH---hhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALS---ATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~---~l~~~G 41 (105)
+.++++++..|..+++.+|+-++-. .+++.+ .|.+.|
T Consensus 172 ~~v~avR~~~g~~~~l~vDaN~~~~-~~~A~~~~~~l~~~~ 211 (368)
T 3q45_A 172 ERIRMIREAAGDSITLRIDANQGWS-VETAIETLTLLEPYN 211 (368)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCBC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCC-hHHHHHHHHHHhhcC
Confidence 3456777777778899999887765 555544 445544
No 488
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=32.62 E-value=23 Score=20.64 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=24.3
Q ss_pred CCCcEEEEccC-----C-hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-... . ...+..+.++|+++|++++...
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 94 ESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp SCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 35888875321 2 2357889999999999998754
No 489
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=32.61 E-value=65 Score=21.09 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhh
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSAT 37 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l 37 (105)
+.++++++..|..+++.+|+-+.-. ..++.+.+
T Consensus 176 ~~v~avr~a~g~~~~l~vDaN~~~~-~~~a~~~~ 208 (372)
T 3cyj_A 176 ERVRAAREAIGESVELMVDANGAYT-RKQALYWA 208 (372)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSC-HHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCC-HHHHHHHH
Confidence 3456777777778899999887755 45554443
No 490
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=32.43 E-value=64 Score=21.35 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhc
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRA 39 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~ 39 (105)
.++++++..|..+++.+|+-+.-. ..++.++++.
T Consensus 198 ~v~avR~~~G~~~~l~vDaN~~~~-~~~A~~~~~~ 231 (388)
T 4h83_A 198 RITAAREAAGDDFIICIDANQGYK-PAVAVDLSRR 231 (388)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCBC-HHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEecCcCCC-HHHHHHHHHH
Confidence 356677777888999999988876 6666665554
No 491
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=32.37 E-value=1.1e+02 Score=20.22 Aligned_cols=36 Identities=14% Similarity=0.047 Sum_probs=26.1
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHHHhhhc
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTALSATRA 39 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~ 39 (105)
++.+++.+..+.+.+-|+=+.|+.+++..++++++.
T Consensus 91 ~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~ 126 (448)
T 3dod_A 91 QLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQ 126 (448)
T ss_dssp HHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHH
Confidence 455666666665677777777777778888888764
No 492
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=32.32 E-value=71 Score=21.08 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=24.9
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHH---HHhhhcCCE
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTA---LSATRAGGK 42 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~---~~~l~~~G~ 42 (105)
+.++++++..|..+.+.+|+-++-. .+++ .+.|.+.|.
T Consensus 182 e~v~avR~a~G~d~~l~vDan~~~~-~~~a~~~~~~l~~~~i 222 (391)
T 2qgy_A 182 QFVEKVREIVGDELPLMLDLAVPED-LDQTKSFLKEVSSFNP 222 (391)
T ss_dssp HHHHHHHHHHCSSSCEEEECCCCSC-HHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHhCCCCEEEEEcCCCCC-HHHHHHHHHHHHhcCC
Confidence 4567777777778899999877654 4444 444555443
No 493
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=32.15 E-value=1e+02 Score=20.04 Aligned_cols=43 Identities=14% Similarity=0.165 Sum_probs=30.7
Q ss_pred HHHHHcCCCCcEEEEccCChHHHHHHHHhhhcC------CEEEEEcCCC
Q 040104 8 KIDKAMGTGIDVSFDCAGFNKTMSTALSATRAG------GKVCLVGMGH 50 (105)
Q Consensus 8 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~------G~~v~~g~~~ 50 (105)
.+.+....|++.++.+..+...+..++++.+.. ..+..+|..+
T Consensus 57 vl~rA~~aGV~~ii~~g~~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP 105 (325)
T 3ipw_A 57 VLQRAERNGLSHIIITSGCLNDFKKAIEIINKYQNLTNIKLVTTIGVHP 105 (325)
T ss_dssp HHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHGGGCSSEEEEEECCCG
T ss_pred HHHHHHHcCCcEEEEccCCHHHHHHHHHHHHHCCCcccceEEEEEEECc
Confidence 333333458999888877777788888888764 3677888865
No 494
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=32.08 E-value=23 Score=20.46 Aligned_cols=34 Identities=9% Similarity=0.314 Sum_probs=23.4
Q ss_pred CCCcEEEEccC--C------hHHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCAG--F------NKTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~g--~------~~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+.+|+|+-... . ...+..+.++|++||+++..-.
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp TCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 35788885311 1 1246788899999999987653
No 495
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=32.07 E-value=35 Score=22.11 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=24.2
Q ss_pred CCCcEEEEcc-----CCh---HHHHHHHHhhhcCCEEEEEcC
Q 040104 15 TGIDVSFDCA-----GFN---KTMSTALSATRAGGKVCLVGM 48 (105)
Q Consensus 15 ~g~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g~ 48 (105)
+++|+|+-.- ..+ ..+..+.+.|+|||+++++-.
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 247 TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 4688877521 222 247788999999999998754
No 496
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=32.03 E-value=53 Score=22.20 Aligned_cols=37 Identities=27% Similarity=0.274 Sum_probs=25.7
Q ss_pred HHHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 4 EEVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 4 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
+.++++++..|..+++.+|+-++-. ..++. +.|.+.|
T Consensus 191 e~v~avR~avG~d~~L~vDan~~~t-~~~A~~~~~~Le~~~ 230 (433)
T 3rcy_A 191 EFCRKIRAAVGDKADLLFGTHGQFT-TAGAIRLGQAIEPYS 230 (433)
T ss_dssp HHHHHHHHHHTTSSEEEECCCSCBC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCC-HHHHHHHHHHhhhcC
Confidence 3457778877888999999887765 55554 4455544
No 497
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=31.95 E-value=54 Score=21.97 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=25.3
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHH---HhhhcCC
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTAL---SATRAGG 41 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~G 41 (105)
.++++++..|..+++.+|+-++-. .+++. +.|.+.|
T Consensus 190 ~v~avR~a~G~d~~l~vDaN~~~~-~~~A~~~~~~L~~~~ 228 (412)
T 4e4u_A 190 FCRRVREAVGSKADLLFGTHGQMV-PSSAIRLAKRLEKYD 228 (412)
T ss_dssp HHHHHHHHHTTSSEEEECCCSCBC-HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhCCCCeEEEECCCCCC-HHHHHHHHHHhhhcC
Confidence 456777777878999999888765 55554 4455544
No 498
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=31.94 E-value=70 Score=20.61 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=20.5
Q ss_pred HHHHHHHHcCCCCcEEEEccCChHHHHHHHHh
Q 040104 5 EVEKIDKAMGTGIDVSFDCAGFNKTMSTALSA 36 (105)
Q Consensus 5 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~ 36 (105)
.++++++..|..+++.+|+-+.-. ..++.+.
T Consensus 150 ~v~avr~~~g~~~~L~vDaN~~~~-~~~A~~~ 180 (332)
T 2ozt_A 150 ILKALLAALPPGAKLRLDANGSWD-RATANRW 180 (332)
T ss_dssp HHHHHHHHSCTTCEEEEECTTCCC-HHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEcccCCCC-HHHHHHH
Confidence 356677766767899999877654 4444333
No 499
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=31.89 E-value=16 Score=23.48 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=26.2
Q ss_pred CCcEEEEccCChHHHHHHHHhhhcCCEEEEEcCCC
Q 040104 16 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 50 (105)
Q Consensus 16 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 50 (105)
.+|++|-++|.+..+. -+++++|..++.+|...
T Consensus 204 ~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 204 KADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH 236 (285)
T ss_dssp TCSEEEECCCCTTCBC--GGGSCTTCEEEECCCEE
T ss_pred cCCEEEECCCCCCCCC--HHHcCCCcEEEEecccC
Confidence 6899999999987433 36689999999998653
No 500
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.74 E-value=93 Score=19.21 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=12.8
Q ss_pred HHHHHHHcCCCCcEEEEccCC
Q 040104 6 VEKIDKAMGTGIDVSFDCAGF 26 (105)
Q Consensus 6 ~~~~~~~~~~g~d~vid~~g~ 26 (105)
.+++.+.. +++|++|.++|.
T Consensus 98 ~~~~~~~~-g~iD~lvnnAg~ 117 (280)
T 4da9_A 98 VDAVVAEF-GRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHHH-SCCCEEEEECC-
T ss_pred HHHHHHHc-CCCCEEEECCCc
Confidence 34444433 379999999886
Done!