BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040106
(324 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242058279|ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
gi|241930260|gb|EES03405.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
Length = 288
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/287 (73%), Positives = 226/287 (78%), Gaps = 21/287 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLVNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPRK+QEHFEDFYEDI+EELSKFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKMQEHFEDFYEDIYEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA ALQGRFYSGRPI+V+FSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPH---------------------LRSRHRRDGDRDYRRSY 277
R K+FG Y+R R RS SP PH G R S
Sbjct: 181 RKKMFGHYKRPYRGRSRSPSPHHRRERRDRDDYRGAGGGGGRGRDDYRGGGGGRRGGGSR 240
Query: 278 RDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
+R + RR H S R+R+PVRE SEERRAKIEQWNRER+E Q
Sbjct: 241 HERYDDGGRRRHGGSPPPRRARSPVRESSEERRAKIEQWNRERDEKQ 287
>gi|226506342|ref|NP_001150605.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|223947729|gb|ACN27948.1| unknown [Zea mays]
gi|407232662|gb|AFT82673.1| C3H4 C3H transcription factor, partial [Zea mays subsp. mays]
gi|414591925|tpg|DAA42496.1| TPA: Splicing factor U2af subunit isoform 1 [Zea mays]
gi|414591926|tpg|DAA42497.1| TPA: Splicing factor U2af subunit isoform 2 [Zea mays]
gi|414591927|tpg|DAA42498.1| TPA: Splicing factor U2af subunit isoform 3 [Zea mays]
gi|414591928|tpg|DAA42499.1| TPA: Splicing factor U2af subunit isoform 4 [Zea mays]
Length = 299
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/301 (71%), Positives = 227/301 (75%), Gaps = 37/301 (12%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGRY---RRRSRSRSFSPIPHLR--------------------------------S 263
R KL+GR R RSRS SP P R
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYRGGGGGGRGRGSRYDRYDDGAGRGG 240
Query: 264 RHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREEN 323
RH R D R DR + RR H S R+R+PVRE SEERRAKIEQWNRERE
Sbjct: 241 RHDRYDDGAGRGGRHDRYDDGGRRRH--GSPPRRARSPVRESSEERRAKIEQWNREREGK 298
Query: 324 Q 324
Q
Sbjct: 299 Q 299
>gi|195625888|gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/309 (70%), Positives = 228/309 (73%), Gaps = 45/309 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGRY---RRRSRSRSFSPIPHLR--------------------------------- 262
R KL+GR R RSRS SP P R
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 263 -------SRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQ 315
RH R D R DR + RR H S S R+R+PVRE SEERRAKIEQ
Sbjct: 241 DDGAGRGGRHARYDDGAGRGGRHDRYDDGGRRRH--GSPSRRARSPVRESSEERRAKIEQ 298
Query: 316 WNREREENQ 324
WNRERE Q
Sbjct: 299 WNREREGKQ 307
>gi|413948479|gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413948481|gb|AFW81130.1| splicing factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit isoform 4 [Zea mays]
gi|413948483|gb|AFW81132.1| splicing factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/306 (71%), Positives = 229/306 (74%), Gaps = 42/306 (13%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGR-YRRRSRSRSFSPIPHLR--------------------------SRHRRDGDR 271
R KL+GR RR +RS SP P R SRH R D
Sbjct: 181 RRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGRGRGSRHDRYDDG 240
Query: 272 DYRRSYRDR---------DYER----SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNR 318
R DR YER RR H S R R+PVRE SEERRAKIEQWNR
Sbjct: 241 AGRGGRHDRYDDGAGRGGRYERYDDGGRRRHG--SPPRRGRSPVRESSEERRAKIEQWNR 298
Query: 319 EREENQ 324
ERE Q
Sbjct: 299 ERESKQ 304
>gi|226492577|ref|NP_001148499.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 305
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/307 (71%), Positives = 229/307 (74%), Gaps = 43/307 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGR-YRRRSRSRSFSPIPHLR---------------------------SRHRRDGD 270
R KL+GR RR +RS SP P R SRH R D
Sbjct: 181 RRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGGRGRGSRHDRYDD 240
Query: 271 RDYRRSYRDR---------DYER----SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWN 317
R DR YER RR H S R R+PVRE SEERRAKIEQWN
Sbjct: 241 GAGRGGRHDRYDDGAGRGGRYERYDDGGRRRH--GSPPRRGRSPVRESSEERRAKIEQWN 298
Query: 318 REREENQ 324
RERE Q
Sbjct: 299 RERESKQ 305
>gi|242088837|ref|XP_002440251.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
gi|241945536|gb|EES18681.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
Length = 307
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/309 (69%), Positives = 227/309 (73%), Gaps = 45/309 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGRY---RRRSRSRSFSPIPHLR--------------------------------- 262
R KL+GR R RSRS SP P R
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGGRGRGSRHDRY 240
Query: 263 -------SRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQ 315
RH R D R +R + RR H S R+R+PVRE SEERRAKIEQ
Sbjct: 241 DDGAGRGGRHDRYDDGAGRGGRHERYDDGGRRRH--GSPPRRARSPVRESSEERRAKIEQ 298
Query: 316 WNREREENQ 324
WNRERE Q
Sbjct: 299 WNREREAKQ 307
>gi|224086130|ref|XP_002307825.1| predicted protein [Populus trichocarpa]
gi|222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/279 (76%), Positives = 225/279 (80%), Gaps = 20/279 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSN Y RPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQP+DP KIQEHFEDFYEDIFEELSKFGEIE LNVCDNLADHMIGNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL +LQGRFYSGRPII +FSPVTDFREATCRQ+EENNCNRGGYCNFMHVKLIG+DL
Sbjct: 121 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDL 180
Query: 239 RNKLFGRYR-------------RRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERS 285
R KLFGRYR R R R + RD + RR+ DRD R
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRDRDYRGNGRRN--DRDGGRK 238
Query: 286 RRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
R R RSR+PVREGSEERRA+IEQWNREREE Q
Sbjct: 239 RHGSPR-----RSRSPVREGSEERRARIEQWNREREEKQ 272
>gi|212275838|ref|NP_001130754.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|194690026|gb|ACF79097.1| unknown [Zea mays]
gi|194703336|gb|ACF85752.1| unknown [Zea mays]
gi|407232734|gb|AFT82709.1| C3H53 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413946518|gb|AFW79167.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413946519|gb|AFW79168.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413946520|gb|AFW79169.1| splicing factor U2af subunit isoform 3 [Zea mays]
Length = 307
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/309 (69%), Positives = 227/309 (73%), Gaps = 45/309 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGRY---RRRSRSRSFSPIPHLRSRHRRD--------------------------- 268
R KL+GR R RSRS SP P R RD
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 269 -------------GDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQ 315
D R DR + RR H S S R+R+PVRE SEERRAKIEQ
Sbjct: 241 DDGAGRGGRHGRYDDGAGRGGRHDRYDDGGRRRH--GSPSRRARSPVRESSEERRAKIEQ 298
Query: 316 WNREREENQ 324
WNRERE Q
Sbjct: 299 WNREREGKQ 307
>gi|195615822|gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/309 (69%), Positives = 227/309 (73%), Gaps = 45/309 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGRY---RRRSRSRSFSPIPHLRSRHRRD--------------------------- 268
R KL+GR R RSRS SP P R RD
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRDHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 269 -------------GDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQ 315
D R DR + RR H S S R+R+PVRE SEERRAKIEQ
Sbjct: 241 DDGAGRGGRHGRYDDGAGRGGRHDRYDDGGRRRH--GSPSRRARSPVRESSEERRAKIEQ 298
Query: 316 WNREREENQ 324
WNRERE Q
Sbjct: 299 WNREREGKQ 307
>gi|351629504|gb|AEQ54731.1| SiU2af35 [Setaria italica]
Length = 294
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/295 (72%), Positives = 224/295 (75%), Gaps = 30/295 (10%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG+DL
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKDL 180
Query: 239 RNKLFGRYRRR---SRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDY------------- 282
R KL+GR R RSRS SP P R RD R YR
Sbjct: 181 RRKLYGRSASRKYHGRSRSRSPPPQRRGHRDRDDYHRDRDDYRGGGGGGRGRGSRHDRYD 240
Query: 283 -------------ERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
+ RR H S R R+PVRE SEERRAKIEQWNRERE Q
Sbjct: 241 DGGGRGGRHDRYDDGGRRRHG-SPPPRRGRSPVRESSEERRAKIEQWNREREAKQ 294
>gi|255539352|ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 272
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/285 (75%), Positives = 221/285 (77%), Gaps = 36/285 (12%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPRKIQEHFEDFYEDIFEEL KFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 239 RNKLFGRY---------------------RRRSRSRSFSPIPHLRSRHRRDGDRDYRRSY 277
R KLFGRY + R R RR GDR RR
Sbjct: 181 RRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRDRDYRGNGRRSGDRHDRR-- 238
Query: 278 RDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREE 322
R + RSR+PVREGSEERRA+IEQWNREREE
Sbjct: 239 -------------RHGSPRRSRSPVREGSEERRARIEQWNREREE 270
>gi|294463000|gb|ADE77038.1| unknown [Picea sitchensis]
Length = 334
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/309 (64%), Positives = 220/309 (71%), Gaps = 45/309 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH RP+ISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPSISPTILLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D QG +DP+KIQEHFEDFYED+FEEL K+GEIE LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GMDPQGHALDPQKIQEHFEDFYEDLFEELGKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AAAAL AL GRFY+GR IIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 HAAAALQALTGRFYAGRAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 239 RNKLFGRYRRRSR--------------------------------------SRSFSPIPH 260
R +LFGRYRR R + PH
Sbjct: 181 RRQLFGRYRRYGHGYSRSRSRSLSPGLSVERHRGYDDRPRGGRGYDDRPYGGRGYDDRPH 240
Query: 261 LRSRHRRDGDRDYRRSYRDRDYERS-------RRTHSRSSTSSRSRTPVREGSEERRAKI 313
R +RDY + DR R R+ SRS + R+R+PVREGS ERRAKI
Sbjct: 241 GGRGFGRKNERDYPGYHDDRHGRRPRSRSPGHRQGRSRSHSPKRNRSPVREGSAERRAKI 300
Query: 314 EQWNREREE 322
EQWNRERE+
Sbjct: 301 EQWNREREQ 309
>gi|356574563|ref|XP_003555415.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 268
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/269 (74%), Positives = 216/269 (80%), Gaps = 4/269 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRP+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQ +DPRKIQ+HFEDFYEDIF EL+KFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA ALHAL+GRFY+ RPII +FSPVTDFREATCRQFEEN+CNRGGYCNFMHVKLIGRDL
Sbjct: 121 QAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSR- 297
R +LFGR R S ++ + RSR R R R R S R
Sbjct: 181 RRRLFGR-NHRGGSGTYHRVSRSRSRSRSASPRYRRERRESDSRGGRRSRERDGSGGRRR 239
Query: 298 --SRTPVREGSEERRAKIEQWNREREENQ 324
P REGSEERRA+IEQWNREREEN+
Sbjct: 240 QHGSPPAREGSEERRARIEQWNREREENK 268
>gi|356521086|ref|XP_003529189.1| PREDICTED: splicing factor U2af small subunit A-like isoform 1
[Glycine max]
gi|356521088|ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit A-like isoform 2
[Glycine max]
gi|356521090|ref|XP_003529191.1| PREDICTED: splicing factor U2af small subunit A-like isoform 3
[Glycine max]
Length = 271
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/271 (73%), Positives = 212/271 (78%), Gaps = 5/271 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRP+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQP+DPRKIQ+HFEDFYEDIF EL+KFG+IE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA ALHAL GRFY+ RPII +FSPVTDFREATCRQFEEN+CNRGGYCNFMHVKLIGRDL
Sbjct: 121 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180
Query: 239 RNKLFGRYRRRSRS-----RSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSS 293
R +LFGR+ R RS R + R R R
Sbjct: 181 RRRLFGRHHRGGSGTYHRVSRSRSRSRSRSGSPRHRRERHERDSRGRRSREREYRERDGG 240
Query: 294 TSSRSRTPVREGSEERRAKIEQWNREREENQ 324
R +P REGSEERRA+IEQWNREREE Q
Sbjct: 241 GRRRHGSPAREGSEERRARIEQWNREREEKQ 271
>gi|357135864|ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
[Brachypodium distachyon]
gi|357135866|ref|XP_003569529.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Brachypodium distachyon]
gi|357135868|ref|XP_003569530.1| PREDICTED: splicing factor U2af small subunit B-like isoform 3
[Brachypodium distachyon]
Length = 281
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/279 (73%), Positives = 221/279 (79%), Gaps = 16/279 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSR+HNRPTISPT++L NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPRK+QEHFEDFYEDIFEELSKFGEIE LNVCDNL+DHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA ALQGRFYSGR IIV+FSPVTDFREATCRQ+EEN C RGG+CNFMHVK IG+DL
Sbjct: 121 QAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPH----------------LRSRHRRDGDRDYRRSYRDRDY 282
R KLFGRYRR R RS SP PH R G S R+ +
Sbjct: 181 RKKLFGRYRRSHRGRSRSPSPHHRRERRDRDDYRGRDDYRRGGGGGGGGRRGGSSRNERH 240
Query: 283 ERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNRERE 321
+ R S R+R+PVRE SEERRAKIEQWNRE+E
Sbjct: 241 DDGGRRRYGGSPPRRARSPVRENSEERRAKIEQWNREKE 279
>gi|13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/277 (71%), Positives = 219/277 (79%), Gaps = 13/277 (4%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLL+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQP+DPRKIQ+HFEDFYED+FEELSK+GEIE LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AL L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 239 RNKLFGRYRRRSRS---------RSFSPIPH-LRSRHRRDGDRDYR---RSYRDRDYERS 285
R +LFGRYRRR R PH R RRD DR+ R + R R
Sbjct: 181 RRQLFGRYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRNQRYHDKGRRPRSRSPG 240
Query: 286 RRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREE 322
R SRS R R+PVRE SEERRAKI QWNRE+E+
Sbjct: 241 HRGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQ 277
>gi|326498815|dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/280 (74%), Positives = 223/280 (79%), Gaps = 18/280 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSR+HNRPTISPT++L NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPRK+QEHFEDFYEDIFEELSKFGEIE LNVCDNL+DHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA ALQGRFYSGR IIV+FSPVTDFREATCRQ+EEN C RGG+CNFMHVK IG+DL
Sbjct: 121 QAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPH-----------------LRSRHRRDGDRDYRRSYRDRD 281
R KLFGRYRR R RS SP PH R G R S +R
Sbjct: 181 RKKLFGRYRRSQRGRSRSPSPHHRRERRDRDDYRGRDDFRRGGGGGGGGRRGGSSRHERH 240
Query: 282 YERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNRERE 321
+ RR + S R+R+PVRE SEERRAKIEQWNRERE
Sbjct: 241 DDGGRRRYG-GSPPRRARSPVRENSEERRAKIEQWNRERE 279
>gi|297727107|ref|NP_001175917.1| Os09g0491756 [Oryza sativa Japonica Group]
gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=OsC3H60
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
gi|125564203|gb|EAZ09583.1| hypothetical protein OsI_31864 [Oryza sativa Indica Group]
gi|125606167|gb|EAZ45203.1| hypothetical protein OsJ_29848 [Oryza sativa Japonica Group]
gi|215692945|dbj|BAG88365.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704518|dbj|BAG94151.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679017|dbj|BAH94645.1| Os09g0491756 [Oryza sativa Japonica Group]
Length = 290
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/289 (69%), Positives = 222/289 (76%), Gaps = 23/289 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLLSNMY RPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+DAQG PIDP KIQ FEDFYEDIFEELSK+GEIE L+VCDN ADHMIGNVYVQFREE+
Sbjct: 61 GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL AL GR+YSGRPIIVEFSPV+DFREATCRQ+EEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL 180
Query: 239 RNKLFGRYRRRSRS----RSFSPIPH---------------LRSRHRRDGDRDYRRSYRD 279
R +LFG R RS RS SP P+ + R G DY R
Sbjct: 181 RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR 240
Query: 280 RDYERSRRTHSRSS----TSSRSRTPVREGSEERRAKIEQWNREREENQ 324
R ER R ++ SR+R+PVR+GSEERRA+IEQWNRERE Q
Sbjct: 241 RSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQ 289
>gi|449443402|ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
gi|449510609|ref|XP_004163713.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 326
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/280 (70%), Positives = 222/280 (79%), Gaps = 17/280 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PIDPR IQ+HFE+FYED+F+EL+K+GEIE LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K IGR+L
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180
Query: 239 RNKLFGRYRRRS----------------RSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDY 282
R++LF YRRR RS+ H R RD + RS R R
Sbjct: 181 RHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHE-SRSRRHRTT 239
Query: 283 ERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREE 322
R+ SRS ++R+PVREGSEERRAKIEQWN+ERE+
Sbjct: 240 SPGHRSRSRSPRGRKNRSPVREGSEERRAKIEQWNKEREQ 279
>gi|255573032|ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 322
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/283 (70%), Positives = 226/283 (79%), Gaps = 18/283 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPTLLLSNMYQRPD+ITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDIITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDA G PIDPRKIQ+HFE+FYED+F+ELSK+GEI+ LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDANGNPIDPRKIQQHFEEFYEDLFQELSKYGEIDSLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AL L GRFY+GRPII +FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K IGR+L
Sbjct: 121 DAENALRNLSGRFYAGRPIIADFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGREL 180
Query: 239 RNKLFGRYRRR-----------SRSRSFSPIPHL-RSRHRRDGDRDYRRSYRDRDY---- 282
R++LFGRYRRR R RS H+ R RR D D R R R Y
Sbjct: 181 RHQLFGRYRRRRSHSHSRSRSLQRHRSHEEYYHVGRGSGRRYDDEDRYRGSRSRRYRSIS 240
Query: 283 -ERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
++SRR SRS R+R+PVREGSEERRA+I QWN+E+E+ Q
Sbjct: 241 PDQSRR-RSRSPGLRRNRSPVREGSEERRARIAQWNKEKEQQQ 282
>gi|294461365|gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/279 (75%), Positives = 227/279 (81%), Gaps = 18/279 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRP+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D QGQ +DPRKIQEHFEDF+EDIFEELSKFGEIE LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GLDPQGQAMDPRKIQEHFEDFFEDIFEELSKFGEIENLNICDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL A+QGRFYSGRPIIV+FSPVTDFREATCRQFEENNCNRGGYCNFMHVK I +DL
Sbjct: 121 QAAAALKAMQGRFYSGRPIIVDFSPVTDFREATCRQFEENNCNRGGYCNFMHVKKINKDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHL----------------RSRHRRDGDRDYRRSYRDRDY 282
R KLFGR+RR RS S L R RR DRDYR S DRD
Sbjct: 181 RRKLFGRFRRFRGGRSRSRSRSLSPLPPPPPSRSRRYDDRGNGRRYEDRDYRSS--DRDE 238
Query: 283 ERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNRERE 321
R +RS + R+R+P R+GS ERRA+IEQWNRERE
Sbjct: 239 RRGSVKRTRSRSPRRNRSPARDGSAERRARIEQWNRERE 277
>gi|326528149|dbj|BAJ89126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/288 (70%), Positives = 221/288 (76%), Gaps = 25/288 (8%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PI+P KIQ FEDFYEDIF+ELSK GE+E L+VCDNLADH+IGNVYVQFREE+
Sbjct: 61 GVDAQGNPINPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL ALQGRFYSGRPII EFSPVTDFREATCRQFEE+NCNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKQIGRDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHR-RDGDR--------DYRRSYRDRD-----YER 284
R +L+G RS S S RH RD DR DY DR Y
Sbjct: 181 RKRLYGHLHSSRRSHSRSSRSPSPYRHHARDRDRSSRSKDRGDYYGGSLDRGDYGDYYHH 240
Query: 285 SRRTHSRS-----------STSSRSRTPVREGSEERRAKIEQWNRERE 321
SRR+ R+ SR+R+PVREGSEERRAKIEQWNRER+
Sbjct: 241 SRRSSERNRNYDSDGSRRRRHRSRTRSPVREGSEERRAKIEQWNRERD 288
>gi|225457677|ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera]
gi|359491881|ref|XP_003634337.1| PREDICTED: splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/283 (76%), Positives = 223/283 (78%), Gaps = 28/283 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPRKIQEHFEDFYEDIFEEL KFGEIE LNVCDNLADHMIGNVYVQF+EEE
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 239 RNKLF-----------------GRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRD 281
R KLF RYRR S R R RR GD+
Sbjct: 181 RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRGNGRRSGDK--------HG 232
Query: 282 YERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
+ RR H + RSR+PVREGSEERRA+IE WNREREE Q
Sbjct: 233 SDGGRRRH---GSPRRSRSPVREGSEERRARIELWNREREERQ 272
>gi|449455651|ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
gi|449485076|ref|XP_004157064.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/276 (77%), Positives = 224/276 (81%), Gaps = 10/276 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPRKIQEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EENNCNRGGYCNFMHVK+IG+DL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRR----------T 288
R KLFGRYR SRS S R+R D R R RS+
Sbjct: 181 RRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240
Query: 289 HSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
S + SRS VREGSEERRA+IEQWNREREE Q
Sbjct: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREEKQ 276
>gi|224061819|ref|XP_002300614.1| predicted protein [Populus trichocarpa]
gi|222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/273 (76%), Positives = 218/273 (79%), Gaps = 7/273 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQP+DP KIQEHFE+FYEDIFEEL+KFGEIE LNVCDNLADHMIGNVYV F+EE+
Sbjct: 61 GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 239 RNKLFGRYR-------RRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSR 291
R KLFGRYR R R R DRD R R R + R
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRGNGRRNDKYDR 240
Query: 292 SSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
R + VREGSEERRA+IEQWNREREE Q
Sbjct: 241 EGGRKRHGSTVREGSEERRARIEQWNREREEKQ 273
>gi|68036691|gb|AAY84879.1| U2AF small subunit [Triticum aestivum]
Length = 314
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/288 (70%), Positives = 218/288 (75%), Gaps = 25/288 (8%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PIDP KIQ FEDFYEDIF+ELSK GE+E L+VCDNLADH+IGNVYVQFREE+
Sbjct: 61 GVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL ALQGRFYSGRPII EFSPVTDFREATCRQFEE+NCNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDR---------DYRRSYRDRD-----YER 284
R +L+G R RS S S RH DY DR Y
Sbjct: 181 RKRLYGHLHRSGRSHSRSSRSPSPYRHHARDRDRSSRSRDRGDYYGGSLDRGDYGDYYHH 240
Query: 285 SRRTHSRS-----------STSSRSRTPVREGSEERRAKIEQWNRERE 321
SRR+ R+ SR+R+PVREGSEERRAKIEQWNRERE
Sbjct: 241 SRRSSERNRNYDSDGSRCRRHRSRTRSPVREGSEERRAKIEQWNRERE 288
>gi|226502062|ref|NP_001140674.1| uncharacterized protein LOC100272749 [Zea mays]
gi|194700362|gb|ACF84265.1| unknown [Zea mays]
gi|194700522|gb|ACF84345.1| unknown [Zea mays]
gi|223975941|gb|ACN32158.1| unknown [Zea mays]
gi|407232750|gb|AFT82717.1| C3H40 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414886043|tpg|DAA62057.1| TPA: splicing factor U2af subunit isoform 1 [Zea mays]
gi|414886044|tpg|DAA62058.1| TPA: splicing factor U2af subunit isoform 2 [Zea mays]
gi|414886045|tpg|DAA62059.1| TPA: splicing factor U2af subunit isoform 3 [Zea mays]
gi|414886046|tpg|DAA62060.1| TPA: splicing factor U2af subunit isoform 4 [Zea mays]
gi|414886047|tpg|DAA62061.1| TPA: splicing factor U2af subunit isoform 5 [Zea mays]
gi|414886048|tpg|DAA62062.1| TPA: splicing factor U2af subunit isoform 6 [Zea mays]
gi|414886049|tpg|DAA62063.1| TPA: splicing factor U2af subunit isoform 7 [Zea mays]
gi|414886050|tpg|DAA62064.1| TPA: splicing factor U2af subunit isoform 8 [Zea mays]
Length = 287
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/286 (72%), Positives = 222/286 (77%), Gaps = 20/286 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P+ISPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PIDP +IQE FEDFYEDIF ELSK GEIE L+VCDNLADHMIGNVYV+FREEE
Sbjct: 61 GVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL ALQGR+YSGRPII EFSPVTDFREATCRQFEE++CNRGGYCNFMHVK +GRDL
Sbjct: 121 QAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDL 180
Query: 239 RNKLFGRYRR--RSRSR-SFSPIPH-----------------LRSRHRRDGDRDYRRSYR 278
R KLFG R RS SR S SP P+ + R G R S R
Sbjct: 181 RRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER 240
Query: 279 DRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
R ++ R + SRSR+PVREGSEERRAKIEQWNRERE Q
Sbjct: 241 HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQ 286
>gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 274
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/285 (68%), Positives = 214/285 (75%), Gaps = 31/285 (10%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLLSNMY RPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+DAQG PIDP KIQ FEDFYEDIFEELSK+GEIE L+VCDN ADHMIGNVYVQFREE+
Sbjct: 61 GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL AL GR+YSGRPIIVEFSPV+DFREATCRQ+EEN+CNRGGYCNFMHVK IGRDL
Sbjct: 121 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL 180
Query: 239 RNKLFGRYRRRSRS----RSFSPIPH---------------LRSRHRRDGDRDYRRSYRD 279
R +LFG R RS RS SP P+ + R G DY R
Sbjct: 181 RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR 240
Query: 280 RDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
R ER R ++ +GSEERRA+IEQWNRERE Q
Sbjct: 241 RSSERHRSSYD------------SDGSEERRAQIEQWNREREAAQ 273
>gi|297818960|ref|XP_002877363.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
gi|297323201|gb|EFH53622.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
Length = 277
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/277 (70%), Positives = 216/277 (77%), Gaps = 16/277 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDR NC FYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRANCHFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD G IDPRK+Q HFEDFYED+FEEL+K+GEIE LNVCDNL+DHM+GNVYVQFREEE
Sbjct: 61 GVDVNGNRIDPRKMQAHFEDFYEDLFEELNKYGEIESLNVCDNLSDHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QA ALH LQGRFY+GRPIIV+FSPVTDFREATCRQ+EE C RGGYCNFMH+K I L
Sbjct: 121 QAGNALHNLQGRFYAGRPIIVDFSPVTDFREATCRQYEEETCKRGGYCNFMHLKSISSGL 180
Query: 239 RNKLFGRYRRRS-RSRSFSPIPHLRSRHRRDGDRDYRR----------SYRDRDYERSRR 287
R +L+GRY+ R SRS SP RHR DR + R RSRR
Sbjct: 181 RRQLYGRYKNRHIHSRSRSPY-----RHRSHDDRSHERHSRSRRYDDDDDDGESRSRSRR 235
Query: 288 THSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
SRS + R ++PVR+GSEERRAKIEQWNRE+EE +
Sbjct: 236 YRSRSPSGRRQKSPVRDGSEERRAKIEQWNREKEEQE 272
>gi|356543538|ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/281 (66%), Positives = 214/281 (76%), Gaps = 16/281 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDA G PIDPRKIQ+HFE+FYED+F+ELSK+G+IE LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AA A+ L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSRS 298
R +LFG+ R H R + R Y DRD+ R+ STS R
Sbjct: 181 RRQLFGKSHGRHSRSRSRSPY-RHRSHEERSHRSHSRKYDDRDHHHESRSRRHRSTSPRH 239
Query: 299 ---------------RTPVREGSEERRAKIEQWNREREENQ 324
+PVR+GSEERRA+IEQWNRERE+ +
Sbjct: 240 RRGRSRSRSPGGRRHHSPVRDGSEERRARIEQWNREREDQE 280
>gi|312282783|dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/305 (69%), Positives = 231/305 (75%), Gaps = 40/305 (13%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQP+DPRKIQEHFEDF+ED+FEEL KFGEIE LN+CDNLADHMIGNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EENNCNRGGYCNFMHVKL+ R+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDR---DYRR-SYRDRDYERSRRTHSRSST 294
R KLFGRYRR R S S + RH+R+ DR +R S+RDRD E R + S
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRHKREHDRRDPSHREFSHRDRDREFYRHGSGKRS- 239
Query: 295 SSRSRTPVREGS-----------------------------------EERRAKIEQWNRE 319
S RS REGS EERRA+IEQWNRE
Sbjct: 240 SERSERGDREGSRGDREGSRGDREGSRRRHESSPKRGGSPGGGREGSEERRARIEQWNRE 299
Query: 320 REENQ 324
REE +
Sbjct: 300 REEKE 304
>gi|116788026|gb|ABK24730.1| unknown [Picea sitchensis]
Length = 312
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/285 (68%), Positives = 216/285 (75%), Gaps = 22/285 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH RPTISPT+LLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D QG +DPRKIQEHFEDFYED+FEEL K+GE+E LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD- 237
QAA AL +LQGRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+
Sbjct: 121 QAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 238 -LRNKLFGRYRRRSRSRSFSPIPHL-RSRHRRDGDRDYR-------------------RS 276
R R SRSRS S PH +HR DR R
Sbjct: 181 RRRLFGRYRRYSHSRSRSRSASPHKDHEKHRHHDDRPRHGGRGYDRRYDVDDRDGHRGRR 240
Query: 277 YRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNRERE 321
R R RR SRS + R+R+P+REGS ERRAKIEQWNRE+E
Sbjct: 241 TRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKE 285
>gi|224286856|gb|ACN41131.1| unknown [Picea sitchensis]
Length = 312
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/285 (68%), Positives = 216/285 (75%), Gaps = 22/285 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH RPTISPT+LLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D QG +DPRKIQEHFEDFYED+FEEL K+GE+E LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD- 237
QAA AL +LQGRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+
Sbjct: 121 QAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 238 -LRNKLFGRYRRRSRSRSFSPIPHL-RSRHRRDGDRDYR-------------------RS 276
R R SRSRS S PH +HR DR R
Sbjct: 181 RRRLFGRYRRYSHSRSRSRSASPHKDYEKHRHHDDRPRHGGRGYDRRYDVDDRDGHRGRR 240
Query: 277 YRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNRERE 321
R R RR SRS + R+R+P+REGS ERRAKIEQWNRE+E
Sbjct: 241 TRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKE 285
>gi|15239067|ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor, small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
Length = 283
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/281 (73%), Positives = 228/281 (81%), Gaps = 17/281 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQP+DP KIQ+HFEDFYEDIFEEL+KFGE+E LNVCDNLADHMIGNVYV F+EE+
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK I R+L
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRS-YRDRD-YERSRRTHSRS---- 292
R KLFGRYRR R S S + R +R+ R+ R RDRD + +R+ RS
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERHD 240
Query: 293 ---------STSSRSRTP--VREGSEERRAKIEQWNREREE 322
+ RSR+P VREGSEERRA+IEQWNRER+E
Sbjct: 241 RDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERDE 281
>gi|357154143|ref|XP_003576685.1| PREDICTED: splicing factor U2af small subunit A-like [Brachypodium
distachyon]
Length = 295
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/294 (69%), Positives = 220/294 (74%), Gaps = 28/294 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PIDP KIQ FEDFYEDIF+ELSK G +E L+VCDNLADH+IGNVYVQFREE+
Sbjct: 61 GVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGVVESLHVCDNLADHLIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL ALQGRFYSGRPII EFSPVTDFREATCRQFEE+NCNRGGYCNFMHVK IGRDL
Sbjct: 121 QAARALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPH------------LRSRHRRDGDR--------DYRRSYR 278
R +L+G R RS S SP P+ RSR R GD DY Y
Sbjct: 181 RKRLYGHLHRSRRSHSRSPSPYHRHPRDRDRRSSSRSRDNRGGDYYGGSLDRGDYGDYYH 240
Query: 279 DRDYERSRRTHSRSSTSS--------RSRTPVREGSEERRAKIEQWNREREENQ 324
S R + S R+R+PVREGSEERRAKIEQWNRERE Q
Sbjct: 241 HSRRRSSERHRNYDSDDGSRRRRHRSRTRSPVREGSEERRAKIEQWNREREAAQ 294
>gi|297791697|ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
gi|297309568|gb|EFH39992.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/280 (73%), Positives = 227/280 (81%), Gaps = 17/280 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQP+DP KIQ+HFEDFYEDIFEEL+KFGE+E LNVCDNLADHMIGNVYV F+EE+
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK I R+L
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRS-YRDRD-YERSRRTHSRS---- 292
R KLFGRYRR R S S + R +R+ R+ R RDRD + +R+ RS
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDLRDRDRHGNGKRSSDRSERHD 240
Query: 293 ---------STSSRSRTP--VREGSEERRAKIEQWNRERE 321
+ RSR+P VREGSEERRA+IEQWNRER+
Sbjct: 241 RDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERD 280
>gi|218197274|gb|EEC79701.1| hypothetical protein OsI_20991 [Oryza sativa Indica Group]
Length = 308
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 167/185 (90%), Positives = 179/185 (96%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EELSKFGE+E LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QA AA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 239 RNKLF 243
R KL+
Sbjct: 181 RRKLY 185
>gi|115465463|ref|NP_001056331.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|75323083|sp|Q6AUG0.1|U2AFB_ORYSJ RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 38; Short=OsC3H38
gi|50511477|gb|AAT77399.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa Japonica
Group]
gi|113579882|dbj|BAF18245.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|215687259|dbj|BAG91824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740784|dbj|BAG96940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632568|gb|EEE64700.1| hypothetical protein OsJ_19555 [Oryza sativa Japonica Group]
Length = 304
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 167/185 (90%), Positives = 179/185 (96%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EELSKFGE+E LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QA AA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 239 RNKLF 243
R KL+
Sbjct: 181 RRKLY 185
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 285 SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREE 322
RR H S R+R+PVRE SEERRAKIEQWNREREE
Sbjct: 267 GRRRHG--SPPRRARSPVRESSEERRAKIEQWNREREE 302
>gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 301
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/185 (90%), Positives = 179/185 (96%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EELSKFGE+E LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QA AA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 239 RNKLF 243
R KL+
Sbjct: 181 RRKLY 185
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 285 SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNRERE 321
RR H S R+R+PVRE SEERRAKIEQWNRERE
Sbjct: 267 GRRRHG--SPPRRARSPVRESSEERRAKIEQWNRERE 301
>gi|148908155|gb|ABR17193.1| unknown [Picea sitchensis]
Length = 344
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/314 (63%), Positives = 216/314 (68%), Gaps = 50/314 (15%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLH RP+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHTRPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D QG +DPRKIQEHFEDFYED+FEEL K+G IE LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GMDPQGHALDPRKIQEHFEDFYEDLFEELGKYGAIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AAAAL AL GRFY+ R IIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 HAAAALQALTGRFYAERAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 239 RNKLFGRYRRRSRS----RSFSPIPHLRSRHRRDGDRDYR--RSYRDRDY---------- 282
R +LFGRYRR RS S P L R D R R Y DR +
Sbjct: 181 RRQLFGRYRRYGHGYSRSRSRSLSPQLSVERNRGYDDRPRGGRGYDDRPHGGRGYDGGRG 240
Query: 283 --------------ERSRRTH--SRSSTSSRSRTP------------------VREGSEE 308
ER ++ R RSR+P VREGS E
Sbjct: 241 RGYDGRGRGFGRRNERDYPSYHDDRHGRRPRSRSPGHRRGRSRSRSPKRNRGSVREGSAE 300
Query: 309 RRAKIEQWNREREE 322
RRAKIEQWNRERE+
Sbjct: 301 RRAKIEQWNREREQ 314
>gi|15723293|gb|AAL06332.1|AF409140_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 283
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/281 (71%), Positives = 217/281 (77%), Gaps = 17/281 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQP+DP KIQ+HFEDFYEDIFEEL+KFGE+E LNVC NLADHMIGNVYV F+EE+
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCVNLADHMIGNVYVLFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EEN+CNRGG CNFMHVK I R+L
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGCCNFMHVKQISREL 180
Query: 239 RNKLFG---------RYRRRSRSRSFSPIPHLRSRHRRDG-DRD-----YRRSYRDRDYE 283
R KLFG R H R R R D DRD R S R Y+
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKREHSRERERGDVRDRDRHGNGKRSSDRSERYD 240
Query: 284 RSRRTHSRSSTSSRSRTP--VREGSEERRAKIEQWNREREE 322
R R + RSR+P VREGSEERRA+IEQWNRER+E
Sbjct: 241 RDGGGRRRHGSPKRSRSPRNVREGSEERRARIEQWNRERDE 281
>gi|356505320|ref|XP_003521439.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 214/286 (74%), Gaps = 26/286 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--- 115
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMS 60
Query: 116 -ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
IT Q Q +DP K+Q+HF+DFYED+FEELSK+G I+ LN+CDNLADHM+GNVYVQF
Sbjct: 61 IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF 120
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
REE+ AA AL L GRFYSGRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I
Sbjct: 121 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 180
Query: 235 GRDLRNKLFGRYRR---RSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTH-- 289
RDLR KLFGR RR RS SRS SP R+R+ + R S R RD++RS H
Sbjct: 181 SRDLRRKLFGRNRRWNGRSGSRSRSPP---RNRNHGENSHSGRGSGR-RDFDRSHGPHGR 236
Query: 290 -------------SRSSTSSRSRTPVREGSEERRAKIEQWNREREE 322
SRS P+RE S ERRAKIEQWNRE+E+
Sbjct: 237 RPRSRSPRYRGKRSRSPVGRDRSPPIRESSAERRAKIEQWNREKEQ 282
>gi|356572520|ref|XP_003554416.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/285 (67%), Positives = 213/285 (74%), Gaps = 20/285 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--- 115
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMN 60
Query: 116 -ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
IT Q Q +DP K+Q+HF+DFYED+FEELSK+G I+ LN+CDNLADHM+GNVYVQF
Sbjct: 61 IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF 120
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
REE+ AA AL L GRFYSGRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I
Sbjct: 121 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 180
Query: 235 GRDLRNKLFGRYRR---RSRSRSFSPI------PHLRSRHRRDGDRDYRRSYRDRDYERS 285
RDLR KLFGR RR RS SRS SP HL S R G RD+ RS+
Sbjct: 181 SRDLRRKLFGRNRRWNGRSGSRSKSPPRNRNHGEHLHS-GRGSGRRDFDRSHGHHGRRPR 239
Query: 286 RRTHSRSSTSSRSRT------PVREGSEERRAKIEQWNREREENQ 324
R+ SRS P+RE S ERRAKIEQWNRE+E+ +
Sbjct: 240 SRSPRYRGKRSRSPVGRDRSPPIRENSAERRAKIEQWNREKEQGE 284
>gi|15217666|ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
subunit from Oryza sativa. ESTs gb|AA586295 and
gb|AA597332 come from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|19699275|gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|21689611|gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 296
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 205/286 (71%), Positives = 223/286 (77%), Gaps = 28/286 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQP+DPRKIQEHFEDF+ED+FEEL KFGEIE LN+CDNLADHMIGNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EENNCNRGGYCNFMHVKL+ R+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180
Query: 239 RNKLF--GRYRRRSRSRSFSPIPHLRSRHRRDGDR---DYRR-SYRDRDYERSRRTHSRS 292
R KLF R R SRS S + R++RD DR +R S+RDRD E R +
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240
Query: 293 STSSRSRTPVREGS---------------------EERRAKIEQWN 317
S S RS R+GS EERRA+IEQWN
Sbjct: 241 S-SERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|297845720|ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
gi|297336583|gb|EFH67000.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 206/286 (72%), Positives = 219/286 (76%), Gaps = 28/286 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQP+DPRKIQEHFEDF+ED+FEEL KFGEIE LN+CDNLADHMIGNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EENNCNRGGYCNFMHVKL+ R+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180
Query: 239 RNKLFGRYR------------------RRSRSRSFSPIPHLRSRHRRDGDRD-YRRSYRD 279
R KLFGRYR R R PH H RD DR+ YR
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKREYDRRDPPHREFSH-RDRDREFYRHGSGK 239
Query: 280 RDYERSRRTHSRSSTSSRSRTP--------VREGSEERRAKIEQWN 317
R ERS R S R +P REGSEERRA+IEQWN
Sbjct: 240 RSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|357132564|ref|XP_003567899.1| PREDICTED: splicing factor U2af small subunit B-like [Brachypodium
distachyon]
Length = 308
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/217 (83%), Positives = 193/217 (88%), Gaps = 1/217 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG IDP K+QEHFEDFYEDI+EELSKFGE+E LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGHTIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QA AA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRR 275
R KL+G RRS RS SP P R R RD D+RR
Sbjct: 181 RRKLYGGRSRRSHGRSRSPSPQHR-RDNRDRGGDFRR 216
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 292 SSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
S R R+PVRE SEERRAKIEQWNR+REE +
Sbjct: 276 GSPPRRGRSPVRENSEERRAKIEQWNRDREEKK 308
>gi|224034457|gb|ACN36304.1| unknown [Zea mays]
Length = 276
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/276 (72%), Positives = 214/276 (77%), Gaps = 20/276 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P+ISPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PIDP +IQE FEDFYEDIF ELSK GEIE L+VCDNLADHMIGNVYV+FREEE
Sbjct: 61 GVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL ALQGR+YSGRPII EFSPVTDFREATCRQFEE++CNRGGYCNFMHVK +GRDL
Sbjct: 121 QAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDL 180
Query: 239 RNKLFGRYRR--RSRSR-SFSPIPH-----------------LRSRHRRDGDRDYRRSYR 278
R KLFG R RS SR S SP P+ + R G R S R
Sbjct: 181 RRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER 240
Query: 279 DRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIE 314
R ++ R + SRSR+PVREGSEERRAKIE
Sbjct: 241 HRSHDSDGSLRRRGRSRSRSRSPVREGSEERRAKIE 276
>gi|326522777|dbj|BAJ88434.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/221 (82%), Positives = 194/221 (87%), Gaps = 1/221 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG I P K+QEHFEDFYEDI+EELSKFGE+E LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGVAIAPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QA AA +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRD 279
R KL+G RRS RS SP P R R RD D+RR RD
Sbjct: 181 RRKLYGGRSRRSHGRSRSPSPQHR-RDNRDRGGDFRRDGRD 220
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 27/44 (61%)
Query: 279 DRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREE 322
DR + RR + S P RE SEERRAKIEQWNREREE
Sbjct: 281 DRYDDGPRRRYGGSPPRRGRSPPARENSEERRAKIEQWNREREE 324
>gi|195622372|gb|ACG33016.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 284
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/196 (86%), Positives = 178/196 (90%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P+ISPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PIDP +IQE FEDFYEDIF ELSK GEIE L+VCDNLADHMIGNVYV+FREEE
Sbjct: 61 GVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA AL ALQGR+YSGRPII EFSPVTDFREATCRQFEE++CNRGGYCNFMHVK +GRDL
Sbjct: 121 QAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDL 180
Query: 239 RNKLFGRYRRRSRSRS 254
R KLFG R RS S
Sbjct: 181 RRKLFGHLHRSLRSHS 196
>gi|449528561|ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 196/288 (68%), Positives = 220/288 (76%), Gaps = 25/288 (8%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQ +DPRK+Q+HFEDFYED+FEELSK+G++E LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA ALH L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 239 -RNKLFGRYRRRSRSRSFSPIPHLRSRHRR----------------DGDRDYRRSYRDRD 281
R RRRSRSRS S PH + DG++D R Y DR
Sbjct: 181 RRRLFGRSRRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEKDPR--YHDRS 238
Query: 282 YERSRRTHSRSSTSSRS------RTPVREGSEERRAKIEQWNREREEN 323
R+ SRS R+PVRE S ERRAKIEQWNR+RE++
Sbjct: 239 RRPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKD 286
>gi|449451104|ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/287 (68%), Positives = 219/287 (76%), Gaps = 25/287 (8%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQ +DPRK+Q+HFEDFYED+FEELSK+G++E LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAA ALH L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 239 -RNKLFGRYRRRSRSRSFSPIPHLRSRHRR----------------DGDRDYRRSYRDRD 281
R RRRSRSRS S PH + DG++D R Y DR
Sbjct: 181 RRRLFGRSRRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEKDPR--YHDRS 238
Query: 282 YERSRRTHSRSSTSSRS------RTPVREGSEERRAKIEQWNREREE 322
R+ SRS R+PVRE S ERRAKIEQWNR+RE+
Sbjct: 239 RRPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREK 285
>gi|15723291|gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/286 (70%), Positives = 221/286 (77%), Gaps = 28/286 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQP+DPRKIQEHFEDF+ED+FEEL KFGEIE LN+CDNLADHMIGNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EENNC RGGYCNFMHVKL+ R+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCYRGGYCNFMHVKLVSREL 180
Query: 239 RNKL--FGRYRRRSRSRSFSPIPHLRSRHRRDGDR---DYRR-SYRDRDYERSRRTHSRS 292
R KL R R SRS S + R++RD DR +R S+RDRD E R +
Sbjct: 181 RRKLSGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR 240
Query: 293 STSSRSRTPVREGS---------------------EERRAKIEQWN 317
S S RS R+GS EERRA+IEQWN
Sbjct: 241 S-SERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|168004337|ref|XP_001754868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693972|gb|EDQ80322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 201/283 (71%), Positives = 218/283 (77%), Gaps = 17/283 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-IT 117
MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLHNRPT S TLLL+NMYQ PD
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFH 60
Query: 118 PGVDAQG--QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
GVD G Q DPRK+QEHFEDFYEDIFEELSK+GEIE LNVCDNLADHMIGNVYV+FR
Sbjct: 61 GGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EEE AAAAL+AL GRFY+GRPII++FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I
Sbjct: 121 EEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 180
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRH----RRDGDRDY---------RRSYRDRDY 282
R+LR KLFG YRRRSRSRS SP +R RR GDRD+ R R Y
Sbjct: 181 RELRRKLFGNYRRRSRSRSHSPYGRGEARGPPSPRRYGDRDFYDSRRGGGRGGGGRGRGY 240
Query: 283 ERSRRTHSRSSTSSRSRTP-VREGSEERRAKIEQWNREREENQ 324
R R + + R R+P REGS ERRAKI+QWNREREE Q
Sbjct: 241 GRRRDRSRSRTPTRRGRSPAAREGSAERRAKIDQWNREREERQ 283
>gi|168049329|ref|XP_001777116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671559|gb|EDQ58109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 201/283 (71%), Positives = 216/283 (76%), Gaps = 17/283 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-IT 117
MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLHNRPT S TLLL+NMYQ PD
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFH 60
Query: 118 PGVDAQG--QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
GVD G Q DPRK+QEHFEDFYEDIFEELSK+GEIE LNVCDNLADHMIGNVYV+FR
Sbjct: 61 GGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EEE AAAAL+AL GRFY+GRPII++FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I
Sbjct: 121 EEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 180
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRH----RRDGDRDY---------RRSYRDRDY 282
R+LR KLFG YRRRSRSRS SP +R RR GDRD+ R R Y
Sbjct: 181 RELRRKLFGNYRRRSRSRSHSPYGRGEARGPPSPRRYGDRDFYDSRRGGGRGGGGRGRSY 240
Query: 283 ERSRRTHSRSSTSSRSRTP-VREGSEERRAKIEQWNREREENQ 324
R R + R R+P REGS ERRAKIEQWNRERE Q
Sbjct: 241 GRRRDRSRSRTPPRRGRSPGAREGSAERRAKIEQWNREREVRQ 283
>gi|359482307|ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 160/186 (86%), Positives = 174/186 (93%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQP+DPRKIQEHFEDFYED+FEELSK+GEIE LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AA AL L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180
Query: 239 RNKLFG 244
R +LFG
Sbjct: 181 RRQLFG 186
>gi|357438827|ref|XP_003589690.1| Splicing factor U2af small subunit B [Medicago truncatula]
gi|355478738|gb|AES59941.1| Splicing factor U2af small subunit B [Medicago truncatula]
Length = 272
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/194 (83%), Positives = 177/194 (91%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPD+ITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD GQPIDPR+IQ+HFEDFYEDIF ELSKFG +E LNVCDNLADHMIGNVYV F+EE+
Sbjct: 61 GVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIGNVYVLFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AAAAL +L+GRFY GRPI+ +FSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 HAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGREL 180
Query: 239 RNKLFGRYRRRSRS 252
R KLF RR + +
Sbjct: 181 RRKLFSSQRREAEA 194
>gi|255575357|ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 313
Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 189/282 (67%), Positives = 211/282 (74%), Gaps = 16/282 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTP 60
Query: 119 GVD--AQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
GVD AQ Q +DPRKIQ+HFEDFY+D+FEELSK+G+IE LN+CDNLADHM+GNVYVQFRE
Sbjct: 61 GVDPQAQSQSLDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E+ AA AL L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R
Sbjct: 121 EDHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 180
Query: 237 DL---------RNKLFGRYRRRSRSRSFSPIPH-LRSRHRRDGDRDYRRSYRDRDYERSR 286
+L R + R SR R + PH R RRD DR + R RS
Sbjct: 181 ELRRRLFGRNRRRRSRSRSHSPSRHRGYDERPHGGRGFGRRDDDRAHHHERGRRPRSRSP 240
Query: 287 RTHSRSSTSSRSR----TPVREGSEERRAKIEQWNREREENQ 324
S S R PVRE S ERRAKIEQWNRERE+ +
Sbjct: 241 GRRGGRSRSPAGRRNRSPPVRESSAERRAKIEQWNREREQTE 282
>gi|125527197|gb|EAY75311.1| hypothetical protein OsI_03202 [Oryza sativa Indica Group]
Length = 265
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/282 (67%), Positives = 205/282 (72%), Gaps = 34/282 (12%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPR++QEHFEDFYEDIFEELSKFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA ALQGRFYSGRPIIV+FSPVTDFREATCRQ +GRDL
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG-----------------LGRDL 163
Query: 239 RNKLFGRYRRRSRS----------------RSFSPIPHLRSRHRRDGDRDYRRSYRDRDY 282
R KLFG YR+ R R R + G R S +R
Sbjct: 164 RKKLFGHYRKPQRGRSRSPSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHD 223
Query: 283 ERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
+ RR H S R+R+PVRE SEERRAKIEQWNRER+E Q
Sbjct: 224 DGGRRRHG-GSPPRRARSPVRESSEERRAKIEQWNRERDEKQ 264
>gi|125527192|gb|EAY75306.1| hypothetical protein OsI_03197 [Oryza sativa Indica Group]
Length = 263
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 190/280 (67%), Positives = 205/280 (73%), Gaps = 32/280 (11%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPR++QEHFEDFYEDIFEELSKFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA ALQGRFYSGRPIIV+FSPVTDFREATCRQ +GRDL
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG-----------------LGRDL 163
Query: 239 RNKLFGRYRR--------------RSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYER 284
R KLFG YR+ R R R + G R S +R +
Sbjct: 164 RKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDG 223
Query: 285 SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
RR H S R+R+PVRE SEERRAKIEQWNRER+E Q
Sbjct: 224 GRRRHG-GSPPRRARSPVRESSEERRAKIEQWNRERDEKQ 262
>gi|217073019|gb|ACJ84869.1| unknown [Medicago truncatula]
Length = 228
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 160/185 (86%), Positives = 173/185 (93%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPD+ITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD GQPIDPR+IQ+HFEDFYEDIF ELSKFG +E LNVCDNLADHMIGNVYV F+EE+
Sbjct: 61 GVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIGNVYVLFKEED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AAAAL +L+GRFY GRPI+ +FSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L
Sbjct: 121 HAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGREL 180
Query: 239 RNKLF 243
R KLF
Sbjct: 181 RRKLF 185
>gi|297597337|ref|NP_001043811.2| Os01g0667800 [Oryza sativa Japonica Group]
gi|255673535|dbj|BAF05725.2| Os01g0667800 [Oryza sativa Japonica Group]
Length = 207
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/177 (90%), Positives = 170/177 (96%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKD+VNCPFYFKIGACRHGDRCS LHNRPTISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDKVNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPR++QEHFEDFYEDIFEELSKFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
QAAAA ALQGRFYSGRPIIV+FSPVTDFREATCRQ+EEN+CNRGGYCNF HVK IG
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFTHVKQIG 177
>gi|222619017|gb|EEE55149.1| hypothetical protein OsJ_02948 [Oryza sativa Japonica Group]
Length = 263
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 188/280 (67%), Positives = 204/280 (72%), Gaps = 32/280 (11%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKD+VNCPFYFKIGACRHGDRCS LHNRPTISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDKVNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDPR++QEHFEDFYEDIFEELSKFGEIE LNVCDNLADHMIGNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
QAAAA ALQGRFYSGRPIIV+FSPVTDFREATCRQ +GRDL
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQLG-----------------LGRDL 163
Query: 239 RNKLFGRYRR--------------RSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYER 284
R KLFG YR+ R R R + G R S +R +
Sbjct: 164 RKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDG 223
Query: 285 SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
RR H S R+R+PVRE SEERRAKIEQWNRER+E Q
Sbjct: 224 GRRRHG-GSPPRRARSPVRESSEERRAKIEQWNRERDEKQ 262
>gi|388521171|gb|AFK48647.1| unknown [Medicago truncatula]
Length = 327
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/301 (61%), Positives = 212/301 (70%), Gaps = 43/301 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLN 60
Query: 119 GVDAQG--------------QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLAD 164
++ + +DP K+QEHF+DFYED+FEELSK+G+I+ LN+CDNLAD
Sbjct: 61 FINPTPNQPQQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLAD 120
Query: 165 HMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG 224
HM+GNVYVQ++EE+ AA AL L GRFYSGRPIIV FSPVTDFREATCRQ+EEN CNRGG
Sbjct: 121 HMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVGFSPVTDFREATCRQYEENVCNRGG 180
Query: 225 YCNFMHVKLIGRDLRNKLFGRYRR----RSRSRSFSPIPHLRSRHRRDGDRDYR-RSYRD 279
YCNFMH+K I RDLR +LFGR R RS SRS SP R+R R Y R
Sbjct: 181 YCNFMHLKKISRDLRKRLFGRSSRRWNDRSGSRSRSP-----PRNRNYEGRSYSGRGSGR 235
Query: 280 RDYERSRRTHSRSSTSS-------RSRTPV------------REGSEERRAKIEQWNRER 320
RD +RS +H R S RSR+PV RE S ERRA+IEQWNRE+
Sbjct: 236 RDLDRSHGSHGRRPRSRSPRHRGRRSRSPVGRDRSPNPVRGERESSVERRARIEQWNREK 295
Query: 321 E 321
E
Sbjct: 296 E 296
>gi|297740057|emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 155/178 (87%), Positives = 167/178 (93%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVD QGQP+DPRKIQEHFEDFYED+FEELSK+GEIE LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
AA AL L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISR 178
>gi|224132068|ref|XP_002328177.1| predicted protein [Populus trichocarpa]
gi|222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 153/178 (85%), Positives = 167/178 (93%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQG PIDPR+IQ+HFE+FYED+FEEL K+GEIE LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGNPIDPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
A+ AL L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K IGR
Sbjct: 121 HASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGR 178
>gi|224068961|ref|XP_002326241.1| predicted protein [Populus trichocarpa]
gi|222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/182 (84%), Positives = 167/182 (91%), Gaps = 2/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMLTP 60
Query: 119 GVD--AQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
GVD AQ Q +DPRKIQ+HFEDFYED+FEELSK+G+IE LN+CDNLADHM+GNVYVQFRE
Sbjct: 61 GVDPQAQSQSLDPRKIQDHFEDFYEDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
EE AA AL L GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R
Sbjct: 121 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 180
Query: 237 DL 238
L
Sbjct: 181 WL 182
>gi|414878158|tpg|DAA55289.1| TPA: hypothetical protein ZEAMMB73_300759 [Zea mays]
Length = 172
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 152/166 (91%), Positives = 160/166 (96%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKDRVNCPFYFKIG CRHGDRCSRLHNRPTISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEYLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
GVDAQGQPIDP K+QEHFEDFYEDI+EEL KFGEIE LNVCDNLADHMIGNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG 224
QAA A +ALQGRFYSGRPIIVE+SPVTDFREATCRQFEEN+CNRGG
Sbjct: 121 QAAVAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGG 166
>gi|388506242|gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 182/292 (62%), Positives = 211/292 (72%), Gaps = 28/292 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--- 115
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PTISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLN 60
Query: 116 -ITPGVDAQGQPIDPR--KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYV 172
IT Q QP K+Q+HF+DFYED+F+ELSK+G+I+ LN+CDNLADHM+GNVYV
Sbjct: 61 IITQPNQPQHQPQPLDPDKLQDHFDDFYEDLFQELSKYGQIQSLNICDNLADHMVGNVYV 120
Query: 173 QFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
Q++EE+ AA AL L GRFYSGRPII +FSPVTDFREATCRQ+EEN CNRGGYCNFMH+K
Sbjct: 121 QYKEEDHAANALTNLTGRFYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 180
Query: 233 LIGRDLRNKLFGRYRR---------------RSRSRSFSPIPHL---RSRHRRDGDRD-- 272
I RDLR +LFGR +R R+R++ P RRD DR
Sbjct: 181 KISRDLRRRLFGRNKRWNDRRGSRSRSRSRSPPRNRNYEERPQFGGRGGSGRRDFDRSHG 240
Query: 273 -YRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREEN 323
+ R R R R R SR S + R R+PVRE S ERRAKIEQWN E+E++
Sbjct: 241 RHGRKPRSRSPPRFRGKRSR-SPAGRDRSPVRESSAERRAKIEQWNGEKEQD 291
>gi|307107585|gb|EFN55827.1| hypothetical protein CHLNCDRAFT_57737 [Chlorella variabilis]
Length = 395
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 146/190 (76%), Positives = 169/190 (88%), Gaps = 1/190 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+LL NMYQ P + P
Sbjct: 1 MANHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLQNMYQNPILNAP 60
Query: 119 -GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
G D P+DP+K+QE FEDFYEDIF EL+KFGE+E LNVCDNLADHM+GNVYV+FR+E
Sbjct: 61 LGPDGLPMPVDPKKVQEFFEDFYEDIFLELAKFGEVEYLNVCDNLADHMVGNVYVKFRDE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E+AA AL +QGR+Y+G+PI+VEFSPVTDFREATCRQ+EENNC+RGGYCNFMHV+ + R+
Sbjct: 121 EEAARALQGMQGRYYAGKPIVVEFSPVTDFREATCRQYEENNCSRGGYCNFMHVRPVSRE 180
Query: 238 LRNKLFGRYR 247
LR +LFGRY+
Sbjct: 181 LRKQLFGRYK 190
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/177 (87%), Positives = 167/177 (94%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+PTISPTLLLSNMYQRPDM TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D GQ +D +KIQEHFEDFYED+FEELSK+GEIE LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+AAAAL AL GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH++ IG
Sbjct: 121 EAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLRRIG 177
>gi|302776046|ref|XP_002971319.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
gi|300161301|gb|EFJ27917.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
Length = 275
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/172 (88%), Positives = 163/172 (94%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+PTISPTLLLSNMYQRPDM TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D GQ +D +KIQEHFEDFYED+FEELSK+GEIE LNVCDNLADHM+GNVYVQFREEE
Sbjct: 61 GMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH 230
+AAAAL AL GRFY+GRPIIV+FSPVTDFREATCRQ+EEN CNRGGYCNFMH
Sbjct: 121 EAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 172
>gi|384254294|gb|EIE27768.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 186/263 (70%), Gaps = 23/263 (8%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM-IT 117
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLL N+YQ P +
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLPNLYQNPALNAP 60
Query: 118 PGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
PG D P+D RK QEHFEDFYEDIFEE+ K+G+IE LNVCDNLADHM+GNVY++F +E
Sbjct: 61 PGPDGLPMPVDARKSQEHFEDFYEDIFEEMDKYGQIEHLNVCDNLADHMVGNVYIKFVDE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
+ AA AL L GRFY+GRPI++EFSPVTDFREATCRQ+EEN C RGGYCNFMH++ I +
Sbjct: 121 DAAARALQGLTGRFYAGRPIMIEFSPVTDFREATCRQYEENTCTRGGYCNFMHLRPISKG 180
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSR 297
LR LFGRY++ +++ RS R + R
Sbjct: 181 LRKDLFGRYKK----------------------KEHSRSRSRSKERRDDKGRGRDRDRDG 218
Query: 298 SRTPVREGSEERRAKIEQWNRER 320
+ RE S ERRAKI WN+E+
Sbjct: 219 GKDRKRETSAERRAKIAAWNKEK 241
>gi|159476640|ref|XP_001696419.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
gi|158282644|gb|EDP08396.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
Length = 273
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/190 (77%), Positives = 164/190 (86%), Gaps = 1/190 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+L++NMYQ P + P
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAP 60
Query: 119 -GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
G D +DPR QEHFEDFYED+FEEL+ GE+E LNVCDN ADHM+GNVY +FR+E
Sbjct: 61 LGPDGLPIRVDPRAAQEHFEDFYEDVFEELAAHGELENLNVCDNFADHMVGNVYAKFRDE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
+ AA AL ALQGR+Y GRPIIVEFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+
Sbjct: 121 DAAARALTALQGRYYDGRPIIVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPISRE 180
Query: 238 LRNKLFGRYR 247
LR KLFGRY+
Sbjct: 181 LRKKLFGRYK 190
>gi|255089300|ref|XP_002506572.1| predicted protein [Micromonas sp. RCC299]
gi|226521844|gb|ACO67830.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/189 (76%), Positives = 161/189 (85%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHN+PT+S T+L+SNMYQ P
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNKPTLSQTILMSNMYQSPAAAAI 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ DPR IQEHFEDFYEDIFEEL+K+GEIE LNVCDN +DH+IGNVYV+FREEE
Sbjct: 61 ANPSAQINTDPRAIQEHFEDFYEDIFEELAKYGEIEGLNVCDNTSDHLIGNVYVKFREEE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AAL+AL GRFYSGRPI+ EFSPVTDFRE+TCRQ+EEN CNRGGYCNFMH+K I R L
Sbjct: 121 SALAALNALSGRFYSGRPILCEFSPVTDFRESTCRQYEENTCNRGGYCNFMHLKPISRQL 180
Query: 239 RNKLFGRYR 247
R LFGRY+
Sbjct: 181 RKILFGRYK 189
>gi|303287873|ref|XP_003063225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455057|gb|EEH52361.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 141/193 (73%), Positives = 163/193 (84%), Gaps = 4/193 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+PT+S T+L+SNMYQ P+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTLSQTILMSNMYQSPEAAMA 60
Query: 119 GVDAQGQPI----DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
A + D RK+QEHFEDFYEDIFEEL+ +GEIE LN+CDNLADH++GNVYV++
Sbjct: 61 AQAATSGAVPEAPDARKMQEHFEDFYEDIFEELATYGEIEGLNICDNLADHLVGNVYVKY 120
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
REEE A AAL+AL GRFY+GRPI+ EFSPVTDFRE+TCRQ+EEN C RGGYCNFMH+K I
Sbjct: 121 REEESALAALNALSGRFYAGRPILCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHLKPI 180
Query: 235 GRDLRNKLFGRYR 247
R+LR LFGRY+
Sbjct: 181 SRNLRKILFGRYK 193
>gi|302846943|ref|XP_002955007.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
gi|300259770|gb|EFJ43995.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
Length = 288
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/189 (77%), Positives = 165/189 (87%), Gaps = 1/189 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT+L++NMYQ P + P
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAP 60
Query: 119 -GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
G D +DP+ QEHFEDFYED+FEEL++ GE+E LNVCDN ADHM+GNVY +FR+E
Sbjct: 61 LGPDGLPIRVDPKAAQEHFEDFYEDVFEELAQHGELENLNVCDNFADHMVGNVYAKFRDE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
+ AA AL ALQGR+Y GRPI+VEFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K IGR+
Sbjct: 121 DAAARALQALQGRYYDGRPIVVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPIGRE 180
Query: 238 LRNKLFGRY 246
LR KLFGRY
Sbjct: 181 LRRKLFGRY 189
>gi|412985218|emb|CCO20243.1| predicted protein [Bathycoccus prasinos]
Length = 307
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 157/194 (80%), Gaps = 3/194 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI-T 117
MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHN+PT+S TLLL NMYQ P+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNKPTVSQTLLLINMYQSPEQARL 60
Query: 118 PGVDAQG-QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
G +AQG + +P+ +QEH+EDF DIFEEL+ GEIE LNVCDNLADHM+GNVYV+F +
Sbjct: 61 LGGNAQGARTSEPQDVQEHYEDFCHDIFEELAIHGEIEELNVCDNLADHMVGNVYVKFAD 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI-G 235
E+ A A +L GR+Y GRPI EFSPVTDFRE+TCRQ+EEN C RGGYCNFMHV+ I
Sbjct: 121 EDDAMKAKQSLDGRYYMGRPIKCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHVRPIKN 180
Query: 236 RDLRNKLFGRYRRR 249
+ L + LFGRY ++
Sbjct: 181 QTLAHALFGRYGKK 194
>gi|325180898|emb|CCA15308.1| splicing factor U2AF 35 kDa subunit putative [Albugo laibachii
Nc14]
Length = 331
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 165/215 (76%), Gaps = 10/215 (4%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMIT 117
AEHLA I GTE+DRVNCPFYFKIGACRHGDRCSRLHN+P S T+L+S+MYQ P +I
Sbjct: 51 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIA 110
Query: 118 PGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D G +D +K+ E FEDFYE++FEEL KFG++E LN+CDNL DH++GNVYV++ +E
Sbjct: 111 QNGDPSG--LDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDE 168
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E AAAA +L GRFY+GRP++ EFSPVTDFREA CRQF+E CNRGGYCNFMHVK + R
Sbjct: 169 EHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHVKTVSRS 228
Query: 238 LR---NKLFGRYR--RRSRSRSFSPI-PHLRSRHR 266
++ +L+ RY+ RR +SRS S H +SR R
Sbjct: 229 MQRELERLYNRYKPPRRGKSRSVSKSRGHSKSRSR 263
>gi|56202175|dbj|BAD73653.1| U2 auxiliary factor small chain-like [Oryza sativa Japonica Group]
Length = 258
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 172/257 (66%), Gaps = 34/257 (13%)
Query: 84 ACRHGDRCSR--LHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYE 141
AC G + L RPTISPT++ +NMYQRPDMITPGVDAQGQPIDPR++QEHFEDFYE
Sbjct: 19 ACLRGGKTGSGMLSVRPTISPTVVFANMYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYE 78
Query: 142 DIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
DIFEELSKFGEIE LNVCDNLADHMIGNVYVQFREE+QAAAA ALQGRFYSGRPIIV+F
Sbjct: 79 DIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPIIVDF 138
Query: 202 SPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRR------------- 248
SPVTDFREATCRQ +GRDLR KLFG YR+
Sbjct: 139 SPVTDFREATCRQLG-----------------LGRDLRKKLFGHYRKPQRGRSRSPSPSP 181
Query: 249 -RSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSE 307
R R R + G R S +R + RR H S R+R+PVRE SE
Sbjct: 182 RHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDGGRRRHG-GSPPRRARSPVRESSE 240
Query: 308 ERRAKIEQWNREREENQ 324
ERRAKIEQWNRER+E Q
Sbjct: 241 ERRAKIEQWNRERDEKQ 257
>gi|301115075|ref|XP_002999307.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
gi|262111401|gb|EEY69453.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
Length = 340
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 148/185 (80%), Gaps = 4/185 (2%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
AEHLA I GTE+DRVNCPFYFKIGACRHGDRCSRLHN+P S T+L+S+MYQ P I
Sbjct: 57 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNP--IAQV 114
Query: 120 VDAQGQP--IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
+ G P +D R++ E FEDFYE++FEEL KFG++E LN+CDNL DH++GNVY ++ +E
Sbjct: 115 IAQNGDPASLDQRQVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYAKYEDE 174
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E AAAA +L GRFY+GRP++ EFSPVTDFREA CRQF+E CNRGGYCNFMH+K + R
Sbjct: 175 EHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVSRS 234
Query: 238 LRNKL 242
++ +L
Sbjct: 235 MQREL 239
>gi|302808806|ref|XP_002986097.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
gi|300146245|gb|EFJ12916.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
Length = 262
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 144/267 (53%), Positives = 178/267 (66%), Gaps = 16/267 (5%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
A+HLA IFGTE+DRVNCPFY K+GACRHGDRCSR H +P S TLLL NMYQ P+ ITPG
Sbjct: 5 AQHLADIFGTEQDRVNCPFYLKMGACRHGDRCSRAHVKPKQSCTLLL-NMYQSPE-ITPG 62
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
+ I ++Q+ + FYED+F+E+SK G++E L +C+N +H+ GNVYVQFR EE
Sbjct: 63 QAYRNTAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAGNVYVQFRHEEH 122
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLR 239
A AA+ AL GRFYSGRPI EFSPVTDFREA+CRQ E+ C+RGG CNF+H+ R L
Sbjct: 123 AVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYRPSRALM 182
Query: 240 NKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYR----DRDYERSRRTHSRSSTS 295
+L G RS S H R DG+RD++R R +RDY R H+R S
Sbjct: 183 RELMG-----DRSSSPPRRDHRRRPREEDGERDHKRRPREEDGERDYRRDGERHTRRSPP 237
Query: 296 SRSRTPVREGSEERRAKIEQWNREREE 322
R RE ER AKIE+WN+ERE+
Sbjct: 238 WR-----RESDRERLAKIERWNKEREK 259
>gi|145354635|ref|XP_001421585.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581823|gb|ABO99878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/184 (67%), Positives = 145/184 (78%), Gaps = 4/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--- 115
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+PT S T+LL+N+Y RPD+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTASQTILLTNLY-RPDVEVA 59
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
P G + QE FE F ED+FEEL + GEIE +NVCDN+ DHM+GNVYV+F
Sbjct: 60 ADPRAATSGAASRAGRGQEGFEAFVEDVFEELDECGEIEGVNVCDNVTDHMMGNVYVKFV 119
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EEE A A+ L+GR+Y GRPI EFSPVTDFRE+TCRQ+EEN+C RGGYCNFMH+K IG
Sbjct: 120 EEEAAGRAVEKLRGRYYDGRPIAAEFSPVTDFRESTCRQYEENSCTRGGYCNFMHLKPIG 179
Query: 236 RDLR 239
R +R
Sbjct: 180 RGMR 183
>gi|308812528|ref|XP_003083571.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
gi|116055452|emb|CAL58120.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
Length = 246
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/207 (61%), Positives = 152/207 (73%), Gaps = 23/207 (11%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P+ S T+LL+NMY+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSASQTVLLTNMYR------- 53
Query: 119 GVDAQGQPIDPR-----------KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMI 167
+ G +DPR Q HFE F ED+FEEL + GEIE +NVCDN DHM
Sbjct: 54 -AEGAGGTVDPRDAASGKSASASAGQGHFEAFVEDLFEELDECGEIEGVNVCDNATDHMA 112
Query: 168 GNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCN 227
GNVYV+F +E+ A AL LQGR+Y GRPI+VE+SPVTDF+E+TCRQ+EEN+C RGGYCN
Sbjct: 113 GNVYVKFVDEDGARRALEKLQGRYYDGRPILVEYSPVTDFKESTCRQYEENSCTRGGYCN 172
Query: 228 FMHVKLIGRDLRNKLFGRYRRRSRSRS 254
FMH++ IGR +R +L RRR+ S
Sbjct: 173 FMHLRPIGRSMRKQL----RRRATGSS 195
>gi|161899399|ref|XP_001712926.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
gi|75756420|gb|ABA27314.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
Length = 193
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+HLASI GTEKDRVNCPFYFKIGACRHG +CSRLHN+PT S T+L N+YQ P + P
Sbjct: 1 MADHLASIHGTEKDRVNCPFYFKIGACRHGSKCSRLHNKPTSSQTILFVNLYQNPALKAP 60
Query: 119 -GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
G D +P +P K Q+ FE FYED+F+E+S FG+I+ + VCDNL+DH+IGNVYV+F ++
Sbjct: 61 VGKDGLPKPKNPYKSQKQFEFFYEDLFQEMSFFGDIDNIYVCDNLSDHLIGNVYVKFLKD 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
+ A AL ++ GRFY R I+ E SPVTDFRE+TCRQ+E+N CNRGGYCNFMH+K + R
Sbjct: 121 KSAMKALKSVSGRFYDKRLIVAETSPVTDFRESTCRQYEDNTCNRGGYCNFMHLKPLKRS 180
Query: 238 LRNKLF 243
RNK+F
Sbjct: 181 FRNKIF 186
>gi|193875780|gb|ACF24526.1| mRNA splicing factor U2 associated factor [Gymnochlora stellata]
Length = 182
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 142/176 (80%), Gaps = 1/176 (0%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-GVDAQGQPIDP 129
KDRVNCPFYFKIGACRHGD+CSR+HNRP S TLL NMYQ P + P G D +P++P
Sbjct: 1 KDRVNCPFYFKIGACRHGDKCSRMHNRPATSQTLLFINMYQNPALTAPLGKDGLPKPLNP 60
Query: 130 RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+Q HF+ FY+DI+EEL+ FG+IE LNVCDNL+DHMIGNVYV++R+E+ A AL ++ G
Sbjct: 61 YNLQSHFQKFYKDIYEELNFFGDIENLNVCDNLSDHMIGNVYVKYRQEKSAMKALKSING 120
Query: 190 RFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGR 245
RFY+GR I+ E SPVTDFRE+TCRQ+++N C+RGGYCNFMH+K I R LR +LF R
Sbjct: 121 RFYAGRIIVAETSPVTDFRESTCRQYDDNTCSRGGYCNFMHLKPIKRSLRKELFTR 176
>gi|145324040|ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|332192738|gb|AEE30859.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 246
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/236 (65%), Positives = 173/236 (73%), Gaps = 28/236 (11%)
Query: 109 MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
MYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED+FEEL KFGEIE LN+CDNLADHMIG
Sbjct: 1 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 60
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
NVYVQF+EE+QAAAAL ALQGRFYSGRPII +FSPVTDFREATCRQ+EENNCNRGGYCNF
Sbjct: 61 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 120
Query: 229 MHVKLIGRDLRNKLF--GRYRRRSRSRSFSPIPHLRSRHRRDGDR---DYRR-SYRDRDY 282
MHVKL+ R+LR KLF R R SRS S + R++RD DR +R S+RDRD
Sbjct: 121 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDR 180
Query: 283 ERSRRTHSRSSTSSRSRTPVREGS---------------------EERRAKIEQWN 317
E R + S S RS R+GS EERRA+IEQWN
Sbjct: 181 EFYRHGSGKRS-SERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 235
>gi|124803997|ref|XP_001347871.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
gi|23496123|gb|AAN35784.1|AE014838_62 U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
Length = 294
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/286 (47%), Positives = 184/286 (64%), Gaps = 33/286 (11%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P + TL++ +MY P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNCAQTLVIRHMYDNPPIAV- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ ++ K +HFE+FYE++F+EL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMVEDEVLDKAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ A A++ L GRFY+G+P+ +E++PVTDFREA CRQF E C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVNELNGRFYAGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRR--DGDRDYRR-SYRD--RDYERSRRTHS 290
R ++ KLF R + P + R R D D D RR SYR+ Y+R RR+
Sbjct: 179 RTVKRKLF--------RRMYKKYPEYKKRRARKDDSDDDGRRESYREGKDKYKRDRRSSH 230
Query: 291 RSSTSSRS---------------RTPVREGSEERRAKIEQWNRERE 321
S+ ++ + RE S ERR KIE+WN+ERE
Sbjct: 231 HYSSKRKNRSDNEDDDDDEERSYKHARRENSAERREKIERWNKERE 276
>gi|82541542|ref|XP_725006.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii]
Length = 309
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 186/281 (66%), Gaps = 20/281 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAV- 59
Query: 119 GVDAQGQPIDPRKIQ---EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ +D + +HFE+FYE++F+EL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMVDDEVLDQAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ A A+ L GRFY+G+P+ +E++PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKL-------FGRYRRRSRSRSFSPIPHLRSRHRRDGDRD------YRRSYR-DRD 281
R ++ +L F Y++ +SR S H R+R +RD Y +Y R
Sbjct: 179 RTVKRRLHKRMYKKFPMYKKNKKSRDDSDGDHRYDRYRDRNNRDKNKRDKYGNNYNSSRR 238
Query: 282 YERSRRTHSRSSTSSRS-RTPVREGSEERRAKIEQWNRERE 321
RS+ ++ + + RS + P RE S ERR KIE+WN+ERE
Sbjct: 239 RHRSQSSNGQDDDNQRSHKYPKRENSLERREKIERWNKERE 279
>gi|330835935|ref|XP_003292017.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
gi|325077756|gb|EGC31448.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
Length = 429
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 161/232 (69%), Gaps = 12/232 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE A+IFGTEKD+ NCPFY KIGACRHGDRCSRLHN+P IS T+LL N+YQ P I+
Sbjct: 1 MAERRAAIFGTEKDQQNCPFYLKIGACRHGDRCSRLHNKPVISQTILLPNLYQSP--ISK 58
Query: 119 GVDAQGQPIDPR----KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
Q + P ++Q+HF++FYEDIFE L+K+G+++ LNVC NL DH++GNVYV++
Sbjct: 59 KAIEQNGGVAPNLTEVELQQHFDEFYEDIFEGLTKYGQVDLLNVCANLGDHLVGNVYVKY 118
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
E++A ++ L+GRFY GRPII EFSPVTDF EA CRQ++ CNRGGYCNFMH+
Sbjct: 119 AREDEANESIKGLKGRFYDGRPIIAEFSPVTDFTEARCRQYDIGACNRGGYCNFMHLHTP 178
Query: 235 GRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSR 286
+ L+ KLFG RRSR SP P R G R + RDRDY R R
Sbjct: 179 SKSLQIKLFG--DRRSR----SPSPRGRYERGGGGRDQERYNDRDRDYGRGR 224
>gi|281203736|gb|EFA77932.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 439
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 149/199 (74%), Gaps = 8/199 (4%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE A++FGTEKD+ NCPFY KIGACRHGDRCSRLHN+P +S T++L N+YQ P + P
Sbjct: 1 MAERRAAMFGTEKDQQNCPFYLKIGACRHGDRCSRLHNKPIVSQTIILPNIYQSPYLKRP 60
Query: 119 GVDAQGQPIDP---RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
GQP P +IQ+HF+DFYEDI E LSK+G+IE L+VC NL DH+IGN+YV++
Sbjct: 61 A----GQPPIPASEEEIQKHFDDFYEDIHEGLSKYGKIELLHVCANLGDHLIGNLYVKYS 116
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ AAAA+ L+GRFY GRPI+ EFSPVTDF E+ CRQF+ C+RGG+CNFMH+
Sbjct: 117 TEDAAAAAIEGLKGRFYDGRPIVAEFSPVTDFNESRCRQFDLGTCDRGGFCNFMHLHNPS 176
Query: 236 RDLRNKLFGRYRRRSRSRS 254
R+L +LFG R SRS S
Sbjct: 177 RELSVRLFGE-RAASRSPS 194
>gi|156086588|ref|XP_001610703.1| U2 splicing factor subunit [Babesia bovis T2Bo]
gi|154797956|gb|EDO07135.1| U2 splicing factor subunit, putative [Babesia bovis]
Length = 251
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/266 (49%), Positives = 173/266 (65%), Gaps = 24/266 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LA I GTE+DRVNCPFY+KIGACRHGD+CSR H +P+ + TL++ +MYQ P +
Sbjct: 1 MAENLARIIGTEEDRVNCPFYWKIGACRHGDQCSRAHYKPSAAQTLVIRHMYQNPPVAI- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ I K +HFE+FYE++F EL K+GEIE + VCDN+ DH+IGNVYV++R
Sbjct: 60 -AIAEGQMISDELLDKAADHFEEFYEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYR 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E AA A+ L GRFY G+PI E++PVTDFREA CRQF E C RGGYCNFMH+K +
Sbjct: 119 DENSAAHAISMLSGRFYGGKPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R +R KL R ++ P + R R +R R Y D + + ++ R
Sbjct: 179 RSVRRKL--------DERMYAEFPEYKKRALRSSERSGR--YVDSEALITFHSYER---- 224
Query: 296 SRSRTPVREGSEERRAKIEQWNRERE 321
P R+ S+ERR IE WNRER+
Sbjct: 225 -----PKRQTSQERRNMIEMWNRERD 245
>gi|432930414|ref|XP_004081462.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 230
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 158/215 (73%), Gaps = 9/215 (4%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ + N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTVAMLNIYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
++ + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR+E
Sbjct: 61 SMEGVTSNVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA C Q+E C RGG+CNFMH+K I RD
Sbjct: 121 EDAEKAMLDLNNRWFNGQPIHAELSPVTDFREACCHQYETGGCTRGGFCNFMHLKPISRD 180
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRD 272
LR +L+G +RR+SR R RSR R+ G RD
Sbjct: 181 LRRQLYG-HRRKSRQRP-------RSRDRQSGSRD 207
>gi|156376577|ref|XP_001630436.1| predicted protein [Nematostella vectensis]
gi|156217457|gb|EDO38373.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+LL NMYQ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILLQNMYQNPQSAAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D I + QEH++ F+ED+F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 VADGTSNAISDVEAQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A++ L R+Y+G+PI E SPVTDFREA CRQ+E C RGG+CNFMH++ I RD
Sbjct: 121 EDAEKAVNDLNNRWYNGQPIYAELSPVTDFREACCRQYEMGECTRGGFCNFMHLRPISRD 180
Query: 238 LRNKLF 243
+R +L+
Sbjct: 181 VRRELY 186
>gi|323454278|gb|EGB10148.1| hypothetical protein AURANDRAFT_14519, partial [Aureococcus
anophagefferens]
Length = 186
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 140/183 (76%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
A HLA I GTE+D+VNCPFYFKIGACRHGDRCSR H++P S T+++ +MYQ P
Sbjct: 1 ATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAA 60
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
+DP+K+QE F+DFYE++++EL+K+GEIE LNVC+NL DHM+GNVY +F +EE
Sbjct: 61 AGGDPSQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEH 120
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLR 239
A+L AL GRFY+GRP++ EFSPVTDFREA CRQ++E C RGGYCNFMH++ R LR
Sbjct: 121 TDASLKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRSLR 180
Query: 240 NKL 242
L
Sbjct: 181 RDL 183
>gi|302815930|ref|XP_002989645.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
gi|300142616|gb|EFJ09315.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
Length = 217
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 155/222 (69%), Gaps = 6/222 (2%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
A+HLA IFGTE+DRVNCPFY K+GACRHGDRCSR H +P S TLLL+NMYQ P+ ITPG
Sbjct: 1 AQHLADIFGTEQDRVNCPFYLKMGACRHGDRCSRAHVKPKQSCTLLLNNMYQSPE-ITPG 59
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
+ I ++Q+ + FYED+F+E+SK G++E L +C+N +H+ GNVYVQFR EE
Sbjct: 60 QAYRNTAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAGNVYVQFRHEEH 119
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLR 239
A AA+ AL GRFYSGRPI EFSPVTDFREA+CRQ E+ C+RGG CNF+H+ R L
Sbjct: 120 AVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYHPSRALM 179
Query: 240 NKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRD 281
+L G RS S H R DG+RD++R R+ D
Sbjct: 180 RELMG-----DRSSSPPRRDHRRRPREEDGERDHKRRPREED 216
>gi|443704810|gb|ELU01671.1| hypothetical protein CAPTEDRAFT_164217 [Capitella teleta]
Length = 234
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLHN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTMLLQNLYINPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++Q+H++DF+E++F EL K+GEIE +NVCDNL DH++GNVY++FR E
Sbjct: 61 TADGSHIIMSDEQVQQHYDDFFEEVFVELEDKYGEIEEMNVCDNLGDHLVGNVYIKFRSE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A + L R+++GRPI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 ESAEKGVEELNNRWFNGRPIHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRRRSR 251
LR +L+GR R R
Sbjct: 181 LRRELYGRSRHSKR 194
>gi|387914810|gb|AFK11014.1| splicing factor U2AF35 [Callorhinchus milii]
gi|392876968|gb|AFM87316.1| U2 small nuclear RNA auxiliary factor 1 [Callorhinchus milii]
gi|392879254|gb|AFM88459.1| splicing factor [Callorhinchus milii]
gi|392880418|gb|AFM89041.1| splicing factor [Callorhinchus milii]
Length = 269
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P T
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A++ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRRRSRSRS 254
LR +L+GR R+ + S
Sbjct: 181 LRRELYGRRRKSQQQGS 197
>gi|66811624|ref|XP_639991.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466958|gb|EAL65002.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 471
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 144/196 (73%), Gaps = 2/196 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MAE A+IFGTEKD+ NCPFY KIGACRHGDRCSRLHN+P +S T+LL N+YQ P
Sbjct: 1 MAERRAAIFGTEKDQQNCPFYLKIGACRHGDRCSRLHNKPVLSQTILLPNLYQSPISKKA 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
Q + ++Q+HF++FYEDI+E L+K+G+++ LNVC NL DH++GNVYV++++
Sbjct: 61 IEAAGGQAPNLSDAELQQHFDEFYEDIYEGLAKYGQVDLLNVCANLGDHLVGNVYVKYQK 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E+ A ++ L+GRFY GRPII EFSPVTDF EA CRQ++ CNRGG+CNFMH+ +
Sbjct: 121 EDDANESIKGLKGRFYDGRPIISEFSPVTDFTEARCRQYDIGTCNRGGFCNFMHLHNPSK 180
Query: 237 DLRNKLFGRYRRRSRS 252
L KLFG + RS S
Sbjct: 181 SLYYKLFGDRKSRSPS 196
>gi|357017169|gb|AET50613.1| hypothetical protein [Eimeria tenella]
Length = 252
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 168/269 (62%), Gaps = 21/269 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H +P+ SPT++L +MY P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPSSSPTIVLRHMYPNPPVAI- 59
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ + + E HFE F+ ++FEEL K+GE+E + VCDN+ DH+IGNVYV++
Sbjct: 60 -AIAEGQNVSDELLDEAADHFEAFFSEVFEELYKYGEVEDMVVCDNIGDHIIGNVYVKYS 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+++ A AL ALQGR+ +G+PI EF+PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 DDDAAKKALSALQGRYDAGKPIQAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R L+ KLF + + H R + H RS +
Sbjct: 179 RSLKRKLFNK---------------MYEEHPEYRQRVRGGRRSRSRSGSPHK-HRRSPSL 222
Query: 296 SRSRTPVREGSEERRAKIEQWNREREENQ 324
R P R SEERRA I QWN+ER+ Q
Sbjct: 223 HRPERPERRTSEERRAMIAQWNQERDAAQ 251
>gi|391345692|ref|XP_003747118.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Metaseiulus
occidentalis]
Length = 229
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLQNLYHNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEHF++F+ED+F EL K+GEIE +NVCDNL DH++GNVYV+FR+E
Sbjct: 61 TADGSHTNMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRKE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
+ A A+ L R+++GRP++ E SPVTDFREA CRQ+E C R G+CNFMH++ I R+
Sbjct: 121 DDAEKAVKELNNRWFAGRPVVAELSPVTDFREACCRQYEMGECTRSGFCNFMHLRPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRKELY 186
>gi|350534948|ref|NP_001232170.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127858|gb|ACH44356.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 147/192 (76%), Gaps = 1/192 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHNRPT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSRTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRRR 249
LR +L+GR R++
Sbjct: 181 LRRELYGRLRKK 192
>gi|237839493|ref|XP_002369044.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|211966708|gb|EEB01904.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|221483313|gb|EEE21632.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii GT1]
gi|221507801|gb|EEE33388.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii VEG]
Length = 254
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/267 (49%), Positives = 167/267 (62%), Gaps = 19/267 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--- 115
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H +PT SPT++L +MY P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPTSSPTIVLRHMYPNPPVAVA 60
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
I G + + +D + +HFE F+ ++FEEL+K+GE+E + VCDN+ DH+IGNVYV++
Sbjct: 61 IAEGQNVSDELLD--QAADHFEAFFSEVFEELAKYGEVEDMVVCDNIGDHIIGNVYVKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+EE A AL ALQGRFYSG+ I EF+PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 DEEAANKALAALQGRFYSGKQIHAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R L+ KLF + F P + R S S
Sbjct: 179 RSLKRKLF--------KKMFDDHPDYGRQRSP------GRRRSRSRQRSSSPRRPTRRRS 224
Query: 296 SRSRTPVREGSEERRAKIEQWNREREE 322
+ P R SEERRA I +WN EREE
Sbjct: 225 PSIQRPERRTSEERRAMIAKWNEEREE 251
>gi|68070599|ref|XP_677211.1| U2 snRNP auxiliary factor, small subunit [Plasmodium berghei strain
ANKA]
gi|56497237|emb|CAI00252.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
berghei]
Length = 304
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 184/281 (65%), Gaps = 20/281 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAV- 59
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ +D + + HFE+FYE++F+EL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMVDDEVLDQAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ A A+ L GRFY+G+P+ +E++PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRR---------SRSRSFSPIPHLRSRHRRDGDRDYRRSYRD-----RD 281
R ++ +L R ++ S+ S H R R R + D+ R Y + R
Sbjct: 179 RTVKRRLHKRMYKKFPMYKKNKKSKDDSDGEHRHDRYRDRNNRDKHKRDKYGNSYNSSRR 238
Query: 282 YERSRRTHSRSSTSSRS-RTPVREGSEERRAKIEQWNRERE 321
RS+ ++ + + RS + P RE S ERR KIE+WN+ERE
Sbjct: 239 RHRSQSSNDQDDDNERSYKHPKRENSLERREKIERWNKERE 279
>gi|156543322|ref|XP_001606160.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Nasonia
vitripennis]
Length = 242
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 147/206 (71%), Gaps = 7/206 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF----GRYRRRSRSRSFSP 257
RDLR L+ G + RSRSRS SP
Sbjct: 181 RDLRRYLYSRKKGGGKGRSRSRSKSP 206
>gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes]
Length = 211
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 145/191 (75%), Gaps = 1/191 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEHF++F+E++F E+ K+GE+E +N+CDNL DH++GNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRR 248
LR +L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 145/191 (75%), Gaps = 1/191 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEHF++F+E++F E+ K+GE+E +N+CDNL DH++GNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRR 248
LR +L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|410896558|ref|XP_003961766.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 224
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 145/191 (75%), Gaps = 1/191 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEHF++F+E++F E+ K+GE+E +N+CDNL DH++GNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRR 248
LR +L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|410896556|ref|XP_003961765.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 231
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 145/191 (75%), Gaps = 1/191 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEHF++F+E++F E+ K+GE+E +N+CDNL DH++GNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRR 248
LR +L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|291224089|ref|XP_002732040.1| PREDICTED: U2 small nuclear RNA auxillary factor 1-like
[Saccoglossus kowalevskii]
Length = 244
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+YQ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNVYQNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
+ + +Q+HF+DF+E++F EL K+GEIE +NVCDN+ DH++GNVYV+FR E
Sbjct: 61 TAEGTHCGMSDVDMQKHFDDFFEEVFTELDDKYGEIEEMNVCDNIGDHLVGNVYVKFRNE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A++ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVNDLNNRWFNGQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGR 245
LR +L+GR
Sbjct: 181 LRRELYGR 188
>gi|410896554|ref|XP_003961764.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 232
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 145/191 (75%), Gaps = 1/191 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEHF++F+E++F E+ K+GE+E +N+CDNL DH++GNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFGRYRR 248
LR +L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|452820320|gb|EME27364.1| splicing factor U2AF 35 kDa subunit [Galdieria sulphuraria]
Length = 285
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHN+P S T+LL NMY D I
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNKPVFSQTILLKNMYLSVDQIAA 60
Query: 119 G---VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
V A+ + I+ HF+DFYED+++ELSK+GEIE ++VC+N+++H+ GNVY++F+
Sbjct: 61 AAIAVGAKPPEMSEEDIKYHFDDFYEDVYDELSKYGEIEEMHVCENMSEHLTGNVYIKFK 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E+ A AL A+ GR+Y+GR + EFSPVTDFREA CR +E C+RG YCNFMH+K I
Sbjct: 121 DEDAAQRALQAVNGRYYAGRMVHAEFSPVTDFREARCRPYERQLCDRGDYCNFMHIKRIS 180
Query: 236 RDLRNKLF 243
DL N LF
Sbjct: 181 DDLFNGLF 188
>gi|348537122|ref|XP_003456044.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 227
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
DA + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFG 244
LR +L+G
Sbjct: 181 LRRELYG 187
>gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
DA + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLFG 244
LR +L+G
Sbjct: 181 LRRELYG 187
>gi|298714129|emb|CBJ27310.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 467
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 141/187 (75%), Gaps = 4/187 (2%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+G AEHLA I GTE+D+VNCPF++KIGACRHGDRCSR H++P S T+L+ N+YQ
Sbjct: 53 MSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQ 112
Query: 112 RP--DMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGN 169
P ++ G D P D +Q+ FEDF+E++++ELSKFGEI +NVCDNL DH+IGN
Sbjct: 113 NPVSAVMAAGGDPSQLPKD--HVQDDFEDFFEEVYQELSKFGEISEMNVCDNLGDHLIGN 170
Query: 170 VYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFM 229
VYV+F +EE A +AL L GR+Y+ RPI+ EFSPVTDFREA CRQF+E CNRGG CNFM
Sbjct: 171 VYVKFLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFM 230
Query: 230 HVKLIGR 236
HVK + R
Sbjct: 231 HVKPVPR 237
>gi|321468463|gb|EFX79448.1| hypothetical protein DAPPUDRAFT_52589 [Daphnia pulex]
Length = 237
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 141/192 (73%), Gaps = 5/192 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+ L N Y P T
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTICLQNFYVNPQNATK 60
Query: 119 GVDAQGQP----IDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQ 173
D P + + QEHF++F+ED+F E K+GEIE +NVCDNL DH++GNVY++
Sbjct: 61 TADGTAVPGIVTMSDEEAQEHFDNFFEDVFAECEDKYGEIEEMNVCDNLGDHLVGNVYIK 120
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKL 233
FR EE A A++ L R+++GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K
Sbjct: 121 FRREEDAEKAVNDLNNRWFAGRPVYAELSPVTDFREACCRQYELGECTRSGFCNFMHLKP 180
Query: 234 IGRDLRNKLFGR 245
I R+LR +L+GR
Sbjct: 181 ISRELRRELYGR 192
>gi|67624011|ref|XP_668288.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis
TU502]
gi|54659468|gb|EAL38043.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis]
Length = 247
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 169/268 (63%), Gaps = 25/268 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H +PT SPT+++ ++Y+ +
Sbjct: 1 MAEHLARILGTEEDRVNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVAL- 59
Query: 119 GVDAQGQPIDPRKIQEH---FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ + + E E FYE+IF+ELSK+GEI L +CDN+ DHMIGNVY++F
Sbjct: 60 -AIAEGQEVSDKLADEESDKVEVFYEEIFKELSKYGEILELLICDNIGDHMIGNVYIRFS 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A AL L+G+ Y+G+PI +E SPV+DF+EA CRQ+ + CNRGGYCNFMH+K +
Sbjct: 119 TEEYAKTALLNLRGKLYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R +++K+F + +S P R + S R + S S
Sbjct: 179 RCVKDKIF--------DQMYSEHPEYLHRKTNSCGKS------------SARDDGKGSES 218
Query: 296 SRSRTPVREGSEERRAKIEQWNREREEN 323
SR R R+ SEERR IE WN+ RE N
Sbjct: 219 SRPRKFQRQSSEERRLMIESWNKRRENN 246
>gi|126329169|ref|XP_001363961.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Monodelphis domestica]
Length = 222
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH++ F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I RD
Sbjct: 121 EDAERAVTELNNRWFNGQAVQAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRD 180
Query: 238 LRNKLFGRYRRR 249
LR +L+GR RR
Sbjct: 181 LRRQLYGRGPRR 192
>gi|432849900|ref|XP_004066668.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 228
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 143/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
DA + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|66361760|ref|XP_627402.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
Length = 256
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 169/268 (63%), Gaps = 25/268 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H +PT SPT+++ ++Y+ +
Sbjct: 8 MAEHLARILGTEEDRVNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVAL- 66
Query: 119 GVDAQGQPIDPRKIQEH---FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ + + E E FYE++F+ELSK+GEI L +CDN+ DHMIGNVY++F
Sbjct: 67 -AIAEGQEVSDKLADEESDKVEVFYEEMFKELSKYGEILELLICDNIGDHMIGNVYIRFS 125
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A AL L+G+ Y+G+PI +E SPV+DF+EA CRQ+ + CNRGGYCNFMH+K +
Sbjct: 126 TEEYAKTALANLRGKMYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVP 185
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R +++K+F + +S P R + S R + S S
Sbjct: 186 RCVKDKIF--------DQMYSEHPEYLHRKTNSCGKS------------SARDDGKGSES 225
Query: 296 SRSRTPVREGSEERRAKIEQWNREREEN 323
SR R R+ SEERR IE WN+ RE N
Sbjct: 226 SRPRKFQRQSSEERRLMIESWNKRRENN 253
>gi|428167701|gb|EKX36656.1| hypothetical protein GUITHDRAFT_78757 [Guillardia theta CCMP2712]
Length = 216
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 137/177 (77%), Gaps = 3/177 (1%)
Query: 59 MAEHLASIFGTEKDR-VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPD--M 115
MA+ LASI GTE DR VNCPFYFK+GACRHGDRCSR HN+P S T+LLS+MYQ P
Sbjct: 1 MADRLASIHGTELDRLVNCPFYFKVGACRHGDRCSRQHNKPLFSQTVLLSHMYQAPASAQ 60
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ G A D + Q+HF++FYE+++EEL KFG+IE LNVC NL DHMIGNVYV++
Sbjct: 61 MMSGPTAMATAADDKASQDHFDEFYEEVYEELEKFGKIEELNVCANLGDHMIGNVYVKYE 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
EEEQA AL+AL GRFY+GR I+ E+SPVTDFRE+ CRQ+EE C GG+CNFMH+K
Sbjct: 121 EEEQAEKALNALNGRFYAGRLIMAEYSPVTDFRESRCRQYEETQCKYGGHCNFMHIK 177
>gi|403348419|gb|EJY73647.1| U2 snRNP auxiliary factor, small subunit, putative [Oxytricha
trifallax]
Length = 386
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+ LA IFGTE+D+VNCPFYFKIGACRHGD C+R+HN+P +S TL L ++Y+ P
Sbjct: 1 MADRLAKIFGTEEDKVNCPFYFKIGACRHGDTCTRIHNKPPLSQTLALPHLYENPPAAVA 60
Query: 119 GVDAQGQPIDPR-KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D P D + HFEDF+E++F EL+KFGE+E + V DN+ DHMIGNVYV+F E
Sbjct: 61 FADGLNVPQDALVEAVNHFEDFFEEVFGELAKFGELEEVIVADNIGDHMIGNVYVKFVTE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
EQA +A + L GR+Y+GR I+ E+SPVTDFRE+ CRQ+ E C+RGGYCNFMH K + +D
Sbjct: 121 EQAQSAFNGLNGRYYAGRVILAEYSPVTDFRESKCRQYNEGQCDRGGYCNFMHPKHVSKD 180
Query: 238 LRNKLF 243
L+ LF
Sbjct: 181 LKRALF 186
>gi|348530872|ref|XP_003452934.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 238
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 143/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
VD I ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR+E
Sbjct: 61 SVDGLTCTISDTEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEIGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|25072205|ref|NP_739566.1| splicing factor U2AF 26 kDa subunit [Mus musculus]
gi|56912216|ref|NP_001008775.1| splicing factor U2AF 26 kDa subunit [Rattus norvegicus]
gi|81912059|sp|Q7TP17.1|U2AF4_RAT RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName:
Full=Liver regeneration-related protein LRRG157/LRRG158;
AltName: Full=U2 auxiliary factor 26; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|81913106|sp|Q8BGJ9.1|U2AF4_MOUSE RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4
gi|24637023|gb|AAN63524.1|AF419339_1 U2 auxiliary factor 26 [Mus musculus]
gi|24637025|gb|AAN63525.1| U2 auxiliary factor 26 [Mus musculus]
gi|33086654|gb|AAP92639.1| Cb2-807 [Rattus norvegicus]
gi|38511878|gb|AAH60972.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|74145330|dbj|BAE36125.1| unnamed protein product [Mus musculus]
gi|148692061|gb|EDL24008.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|149056309|gb|EDM07740.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_d
[Rattus norvegicus]
Length = 220
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 149/200 (74%), Gaps = 2/200 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 180
Query: 238 LRNKLFGRY-RRRSRSRSFS 256
LR +L+GR R RS RS +
Sbjct: 181 LRRQLYGRGPRHRSPPRSHT 200
>gi|149286928|gb|ABR23363.1| U2 snRNP splicing factor small subunit [Ornithodoros parkeri]
Length = 268
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 145/207 (70%), Gaps = 15/207 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 119 GVDAQGQP-IDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + ++QEHF++F+ED+F EL K+GEIE +NVCDNL DH++GNVYV+FR
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFE-------------ENNCNRG 223
EE A A+ L R+++G PI E SPVTDFREA CRQ+E C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRGKTASEECTRS 180
Query: 224 GYCNFMHVKLIGRDLRNKLFGRYRRRS 250
G+CNFMH+K I R+LR +L+GR RR+S
Sbjct: 181 GFCNFMHLKPISRELRRELYGRKRRKS 207
>gi|260831488|ref|XP_002610691.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
gi|229296058|gb|EEN66701.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
Length = 197
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 2/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILMPNLYRNPQNSAQ 60
Query: 119 GVD-AQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + I ++QEH+++F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR
Sbjct: 61 TADGSHCNNISDVEMQEHYDNFFEEVFTELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRY 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
EE A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R
Sbjct: 121 EEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISR 180
Query: 237 DLRNKLFG 244
+LR +L+G
Sbjct: 181 ELRRELYG 188
>gi|197127859|gb|ACH44357.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127861|gb|ACH44359.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|68800128|ref|NP_001020374.1| splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]
gi|297287452|ref|XP_002803161.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Macaca mulatta]
gi|332872227|ref|XP_003319151.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
troglodytes]
gi|344294749|ref|XP_003419078.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Loxodonta africana]
gi|359323574|ref|XP_003640135.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|402862238|ref|XP_003895473.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Papio
anubis]
gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|119629907|gb|EAX09502.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_b [Homo
sapiens]
gi|410206762|gb|JAA00600.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289262|gb|JAA23231.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|327268484|ref|XP_003219027.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 242
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|196016447|ref|XP_002118076.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
gi|190579379|gb|EDV19476.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
Length = 183
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 139/183 (75%), Gaps = 2/183 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLHN+PT S T+++ N++Q P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVMQNIFQNPQHTVQ 60
Query: 119 GVDAQGQP-IDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + + Q+HF+ +YEDIF EL K+GEIE +NVCDNL DH++GNVYV+FR
Sbjct: 61 LADGSYKSNMSDEDAQKHFDHYYEDIFVELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRS 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
EE A+AA+++L R+++G PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R
Sbjct: 121 EEHASAAVNSLNNRWFNGNPIFAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISR 180
Query: 237 DLR 239
LR
Sbjct: 181 SLR 183
>gi|254939700|ref|NP_001157241.1| splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]
gi|348556405|ref|XP_003464013.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Cavia porcellus]
gi|148708397|gb|EDL40344.1| mCG14259, isoform CRA_b [Mus musculus]
gi|149043574|gb|EDL97025.1| rCG60540, isoform CRA_b [Rattus norvegicus]
Length = 239
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|126325215|ref|XP_001364583.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Monodelphis
domestica]
gi|395518569|ref|XP_003763432.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2
[Sarcophilus harrisii]
Length = 248
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|148223762|ref|NP_001089860.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus laevis]
gi|80477616|gb|AAI08559.1| MGC131026 protein [Xenopus laevis]
Length = 245
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|113931334|ref|NP_001039113.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
gi|89268927|emb|CAJ81820.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|193613212|ref|XP_001950331.1| PREDICTED: splicing factor U2af 38 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 249
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVSNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A AA++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEHAEAAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRKYLY 188
>gi|29126228|ref|NP_803432.1| splicing factor U2AF 35 kDa subunit [Danio rerio]
gi|21105405|gb|AAM34646.1|AF506202_1 U2 small nuclear RNA auxiliary factor small subunit [Danio rerio]
Length = 249
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%), Gaps = 2/187 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGL-NAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 119
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 120 EDAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 179
Query: 238 LRNKLFG 244
LR +L+G
Sbjct: 180 LRRELYG 186
>gi|223646964|gb|ACN10240.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672827|gb|ACN12595.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 227
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREAYCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|410906167|ref|XP_003966563.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 235
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 146/202 (72%), Gaps = 5/202 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
DA + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GN FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRRE 116
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 117 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 176
Query: 238 LRNKLFGRYRRRSRSRSFSPIP 259
LR +L+GR R+ S IP
Sbjct: 177 LRRELYGRRRKSQSGVSNKIIP 198
>gi|384494564|gb|EIE85055.1| hypothetical protein RO3G_09765 [Rhizopus delemar RA 99-880]
Length = 243
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 158/240 (65%), Gaps = 15/240 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASI+GTEKD+VNC FYFKIGACRHGDRCSR H +PT S TLL++NMY+ P
Sbjct: 1 MAEYLASIYGTEKDKVNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYKNP----- 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
V + ++QE+F+ FYED+F EL+KFGE+E + VCDN+ DH++GNVY Q+R EE
Sbjct: 56 -VHDAAFHLTESQLQENFDLFYEDVFMELAKFGEVEDMVVCDNVGDHLVGNVYCQYRLEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ +L RFY+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH+K R +
Sbjct: 115 SAGNAVESLNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRTM 174
Query: 239 RNKLFGRYRRRSRSRSFSPI----PHLRSRHRRDGDRDYRR----SYRDRDYERSRRTHS 290
R +L+ R R + R++H D DY++ SY + DY R R S
Sbjct: 175 RRELYEGQRMDIREKRKEETRRDEDERRAKHEPYND-DYKKVKHESYNEDDYRRDRHGSS 233
>gi|112983840|ref|NP_001037756.1| uncharacterized protein LOC687575 [Rattus norvegicus]
gi|254939694|ref|NP_077149.2| splicing factor U2AF 35 kDa subunit isoform 1 [Mus musculus]
gi|348556403|ref|XP_003464012.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Cavia porcellus]
gi|17368837|sp|Q9D883.4|U2AF1_MOUSE RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|12849864|dbj|BAB28511.1| unnamed protein product [Mus musculus]
gi|26354106|dbj|BAC40683.1| unnamed protein product [Mus musculus]
gi|74181282|dbj|BAE29923.1| unnamed protein product [Mus musculus]
gi|76779398|gb|AAI05906.1| Similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) [Rattus norvegicus]
gi|109730851|gb|AAI15480.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|109732120|gb|AAI15481.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|148708396|gb|EDL40343.1| mCG14259, isoform CRA_a [Mus musculus]
gi|149043573|gb|EDL97024.1| rCG60540, isoform CRA_a [Rattus norvegicus]
Length = 239
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|395518567|ref|XP_003763431.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1
[Sarcophilus harrisii]
Length = 248
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|327268486|ref|XP_003219028.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Anolis carolinensis]
Length = 236
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|327268482|ref|XP_003219026.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 242
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|223646168|gb|ACN09842.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672015|gb|ACN12189.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 244
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGIRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+P+ E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVMDLNNRWFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR L+
Sbjct: 181 LRRDLY 186
>gi|122692549|ref|NP_001073737.1| splicing factor U2AF 35 kDa subunit [Bos taurus]
gi|122703746|ref|NP_989986.2| splicing factor U2AF 35 kDa subunit [Gallus gallus]
gi|146325808|sp|A1A4K8.1|U2AF1_BOVIN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235098|emb|CAC33542.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235100|emb|CAC33543.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|119223947|gb|AAI26639.1| U2 small nuclear RNA auxiliary factor 1 [Bos taurus]
gi|296490881|tpg|DAA32994.1| TPA: splicing factor U2AF 35 kDa subunit [Bos taurus]
Length = 237
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|5803207|ref|NP_006749.1| splicing factor U2AF 35 kDa subunit isoform a [Homo sapiens]
gi|297287450|ref|XP_001118538.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Macaca mulatta]
gi|332872225|ref|XP_001137466.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
troglodytes]
gi|344294747|ref|XP_003419077.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Loxodonta africana]
gi|359323572|ref|XP_003640134.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Canis
lupus familiaris]
gi|402862236|ref|XP_003895472.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Papio
anubis]
gi|410060371|ref|XP_003949235.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Pan troglodytes]
gi|267187|sp|Q01081.3|U2AF1_HUMAN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 small
nuclear RNA auxiliary factor 1; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|338263|gb|AAA36619.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|7768747|dbj|BAA95534.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|12654677|gb|AAH01177.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|12804941|gb|AAH01923.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|119629911|gb|EAX09506.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_d [Homo
sapiens]
gi|261861084|dbj|BAI47064.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
gi|410206760|gb|JAA00599.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289260|gb|JAA23230.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410331625|gb|JAA34759.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|239790945|dbj|BAH72001.1| ACYPI001339 [Acyrthosiphon pisum]
Length = 214
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 138/185 (74%), Gaps = 3/185 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVSNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A AA++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEHAEAAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRN 240
R+LRN
Sbjct: 181 RELRN 185
>gi|77736499|ref|NP_001029950.1| splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|426242747|ref|XP_004015232.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Ovis
aries]
gi|122146166|sp|Q3T127.1|U2AF4_BOVIN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|74354897|gb|AAI02152.1| Transmembrane protein 149 [Bos taurus]
gi|296477857|tpg|DAA19972.1| TPA: splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|440894920|gb|ELR47238.1| Splicing factor U2AF 26 kDa subunit [Bos grunniens mutus]
Length = 220
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I RD
Sbjct: 121 EDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRD 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRQLY 186
>gi|138519996|gb|AAI35291.1| LOC733934 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 141/185 (76%), Gaps = 1/185 (0%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
AE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQS 60
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE
Sbjct: 61 ADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+L
Sbjct: 121 DAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 180
Query: 239 RNKLF 243
R +L+
Sbjct: 181 RRELY 185
>gi|71051663|gb|AAH98601.1| U2af1 protein [Danio rerio]
Length = 250
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 142/187 (75%), Gaps = 2/187 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + +++EH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGL-NAVSDVEMREHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 119
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 120 EDAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 179
Query: 238 LRNKLFG 244
LR +L+G
Sbjct: 180 LRRELYG 186
>gi|197692189|dbj|BAG70058.1| U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
Length = 240
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH++ I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLEPISRE 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRELY 186
>gi|326432262|gb|EGD77832.1| splicing factor U2af 38 kDa subunit [Salpingoeca sp. ATCC 50818]
Length = 278
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 143/192 (74%), Gaps = 2/192 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA++LASIFGTEKD+VNC FY+KIGACRHGDRCSRLHN+PT S T+LL N+YQ P +
Sbjct: 1 MADYLASIFGTEKDKVNCSFYYKIGACRHGDRCSRLHNKPTFSQTVLLQNLYQNPANMPA 60
Query: 119 GVDAQ-GQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + G + ++QE+F++F+ D+F EL K+G I +NVCDNL DH++GNVY+ F+
Sbjct: 61 LSDGRPGCAMTEEELQENFDNFFADLFWELEEKYGPIVDMNVCDNLGDHLVGNVYIMFKN 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
EE A A+ L R+Y+G PI+ E SPVTDF+EA CRQ+E C RGG+CNFMH+K + +
Sbjct: 121 EEDAEKAVEDLNNRWYNGNPIVAELSPVTDFKEACCRQYELGECTRGGFCNFMHLKPLSK 180
Query: 237 DLRNKLFGRYRR 248
+R+ LFG RR
Sbjct: 181 SMRDVLFGDRRR 192
>gi|332020538|gb|EGI60953.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
RDLR L+
Sbjct: 181 RDLRRYLY 188
>gi|301771073|ref|XP_002920964.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Ailuropoda
melanoleuca]
gi|338709979|ref|XP_003362292.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2
[Equus caballus]
Length = 220
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRQLY 186
>gi|311257402|ref|XP_003127103.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1 [Sus
scrofa]
Length = 220
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 180
Query: 238 LRNKLF 243
LR +L+
Sbjct: 181 LRRQLY 186
>gi|384486958|gb|EIE79138.1| hypothetical protein RO3G_03843 [Rhizopus delemar RA 99-880]
Length = 230
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 123/236 (52%), Positives = 153/236 (64%), Gaps = 18/236 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASI+GTEKD+VNC FYFKIGACRHGDRCSR H +PT S TLL++NMY+ P P
Sbjct: 1 MAEYLASIYGTEKDKVNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYKNP-AHDP 59
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ ++QE F+ FYED+F EL+KFGE+E + VCDN+ DH++GNVY QFR EE
Sbjct: 60 NFH-----LTENQLQEDFDLFYEDVFMELAKFGEVEEMVVCDNVGDHLVGNVYCQFRLEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ +L RFY+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH+K R L
Sbjct: 115 SAGNAVESLNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRAL 174
Query: 239 RNKLFGRYRRRSRSRSFSPI------------PHLRSRHRRDGDRDYRRSYRDRDY 282
R +L+ R R + + PH R D R+ R S+ RDY
Sbjct: 175 RQELYEGQRMDIREKRKEEMRHEDEERRGKRQPHGDEREYSDYKRERRDSHDRRDY 230
>gi|405969065|gb|EKC34075.1| Splicing factor U2AF 26 kDa subunit [Crassostrea gigas]
Length = 269
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 148/210 (70%), Gaps = 24/210 (11%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPD---M 115
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLHN+PT S T+L+ N+Y P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTVLIENLYMNPQNTAL 60
Query: 116 ITPGV-----DAQGQ----------------PIDPRKIQEHFEDFYEDIFEELSKFGEIE 154
G D QGQ +D ++Q+ +++F+E+++ EL K+GEIE
Sbjct: 61 TADGSHIVLDDVQGQQDFDDFFEEVFTELEDKMDDTELQQFYDEFFEEVYVELEKYGEIE 120
Query: 155 CLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQ 214
+NVCDNL DH++GNVYV+FR EE A A++ L R+++GRP+ E SPVTDFREA CRQ
Sbjct: 121 EMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNELNNRWFNGRPVHAELSPVTDFREACCRQ 180
Query: 215 FEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
+E C RGG+CNFMH+K I R+LR +L+G
Sbjct: 181 YEMGECTRGGFCNFMHLKPISRELRRELYG 210
>gi|390354481|ref|XP_789191.3| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Strongylocentrotus purpuratus]
gi|390354483|ref|XP_003728344.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 241
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 142/194 (73%), Gaps = 8/194 (4%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+++ N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVIQNIYHNPANTAQ 60
Query: 119 GVD-------AQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNV 170
+ A + ++Q+HF+DF+E++F E+ K+GEIE +NVCDNL DH++GNV
Sbjct: 61 SAEGGAAVGIADQSNLSDVEVQQHFDDFFEEVFAEMEQKYGEIEEMNVCDNLGDHLVGNV 120
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH 230
YV+FR EE A A+ L R+++ +PI E SPVTDFREA CRQ+E C RGG+CNFMH
Sbjct: 121 YVKFRYEEDAEKAVEDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMH 180
Query: 231 VKLIGRDLRNKLFG 244
+K I R+LR +L+G
Sbjct: 181 LKPISRELRRELYG 194
>gi|12805423|gb|AAH02184.1| U2af1 protein, partial [Mus musculus]
Length = 238
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 141/185 (76%), Gaps = 1/185 (0%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
AE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQS 60
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE
Sbjct: 61 ADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+L
Sbjct: 121 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 180
Query: 239 RNKLF 243
R +L+
Sbjct: 181 RRELY 185
>gi|357618954|gb|EHJ71738.1| putative U2 snrnp auxiliary factor, small subunit [Danaus
plexippus]
Length = 227
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 138/190 (72%), Gaps = 4/190 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LA+IFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLAAIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG---QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQF 174
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++F
Sbjct: 61 SADGSHLVVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKF 120
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
R EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 RREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI 180
Query: 235 GRDLRNKLFG 244
R+LR L+
Sbjct: 181 SRELRRYLYA 190
>gi|307172750|gb|EFN64036.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|307174220|gb|EFN64865.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
Length = 240
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|307202736|gb|EFN82027.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|328785395|ref|XP_397281.4| PREDICTED: splicing factor U2af 38 kDa subunit [Apis mellifera]
gi|340723033|ref|XP_003399903.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
terrestris]
gi|350423714|ref|XP_003493568.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
impatiens]
gi|380029135|ref|XP_003698237.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Apis florea]
gi|383858860|ref|XP_003704917.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Megachile
rotundata]
Length = 241
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|219126548|ref|XP_002183517.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405273|gb|EEC45217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 251
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 137/186 (73%), Gaps = 2/186 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+HLA I GTE+D+VNCPFYFKIGACRH DRCSRLH++P S TLL+ ++Y+ P
Sbjct: 1 MAQHLARIHGTEEDKVNCPFYFKIGACRHSDRCSRLHHKPAFSQTLLVQHLYRHPTRQAE 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
A G +DPR+ QE F F+ED++ E SKFG IE ++V DNL DHMIG+VYV+F +
Sbjct: 61 LRAAHGGDAHVDPRQAQEDFFAFFEDLYVEFSKFGRIEGMHVVDNLGDHMIGHVYVKFAD 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
EEQA+ AL + GR+Y GRP+I+EFSPVTDFREA CR ++E+ C R GYCNF+H K + R
Sbjct: 121 EEQASDALQVMNGRYYDGRPMIIEFSPVTDFREARCRDYDEDQCARQGYCNFLHSKPVPR 180
Query: 237 DLRNKL 242
L L
Sbjct: 181 ALLQSL 186
>gi|348683758|gb|EGZ23573.1| hypothetical protein PHYSODRAFT_370516 [Phytophthora sojae]
Length = 203
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 147/185 (79%), Gaps = 4/185 (2%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
AEHLA I GTE+DRVNCPFYFKIGACRHGDRCSRLHN+P S T+L+S+MYQ P I
Sbjct: 1 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNP--IAQV 58
Query: 120 VDAQGQP--IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
+ G P +D R + E FEDFYE++FEEL KFG++E LN+CDNL DH++GNVY ++ +E
Sbjct: 59 IAQNGDPASLDQRHVDEEFEDFYEEVFEELCKFGKLEELNICDNLGDHLVGNVYAKYEDE 118
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E AAAA AL GRFY+GRP++ EFSPVTDFREA CRQF+E CNRGGYCNFMH+K + R
Sbjct: 119 EHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPRS 178
Query: 238 LRNKL 242
++ +L
Sbjct: 179 MQREL 183
>gi|1621615|gb|AAB17271.1| U2 snRNP auxiliary factor [Drosophila melanogaster]
Length = 264
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 136/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSDLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|307170197|gb|EFN62583.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|332029584|gb|EGI69473.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|91089827|ref|XP_969424.1| PREDICTED: similar to AGAP002956-PA [Tribolium castaneum]
Length = 227
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|442624928|ref|NP_001259814.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
gi|14286185|sp|Q94535.2|U2AF1_DROME RecName: Full=Splicing factor U2af 38 kDa subunit; AltName: Full=U2
auxiliary factor 38 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|7296221|gb|AAF51512.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|16197991|gb|AAL13766.1| LD24048p [Drosophila melanogaster]
gi|220947574|gb|ACL86330.1| U2af38-PA [synthetic construct]
gi|440213060|gb|AGB92351.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
Length = 264
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 136/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|195470226|ref|XP_002087409.1| GE16227 [Drosophila yakuba]
gi|194173510|gb|EDW87121.1| GE16227 [Drosophila yakuba]
Length = 267
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 136/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|195350065|ref|XP_002041562.1| GM16679 [Drosophila sechellia]
gi|195575511|ref|XP_002077621.1| GD22967 [Drosophila simulans]
gi|194123335|gb|EDW45378.1| GM16679 [Drosophila sechellia]
gi|194189630|gb|EDX03206.1| GD22967 [Drosophila simulans]
Length = 263
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 136/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|194853379|ref|XP_001968154.1| GG24659 [Drosophila erecta]
gi|190660021|gb|EDV57213.1| GG24659 [Drosophila erecta]
Length = 266
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 136/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|307197303|gb|EFN78595.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 3/188 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVTDEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RDLRNKLF 243
R+LR L+
Sbjct: 181 RELRRYLY 188
>gi|290461985|gb|ADD24040.1| Splicing factor U2af 38 kDa subunit [Lepeophtheirus salmonis]
Length = 239
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 138/187 (73%), Gaps = 2/187 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC F+FKIGACRHG+RCSR+HN+PT S T++L+N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFFFKIGACRHGERCSRIHNKPTFSQTIVLNNLYINPQNSAK 60
Query: 119 GVDAQGQP-IDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + R++QEH+++F+ED F E K+GE+E +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHMAHVSDREMQEHYDNFFEDCFVEAEDKYGEVEEMNVCDNLGDHLVGNVYIKFRR 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
EE A A+ L R++ GRPI E SPVTDFREA CRQ+E C R G+CNFMH+K I R
Sbjct: 121 EEDAERAVSDLNNRWFGGRPIYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR 180
Query: 237 DLRNKLF 243
+LR L+
Sbjct: 181 ELRRDLY 187
>gi|93003154|tpd|FAA00160.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 218
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 165/225 (73%), Gaps = 13/225 (5%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116
+ MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLHN+PT S T++L +YQ P +
Sbjct: 4 VKMAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQGLYQNPQIN 63
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFR 175
G+ + ++QEH+++F+E++F EL K+G IE +NVCDNL DH++GNVY++F
Sbjct: 64 NTGIGT----VSDVEMQEHYDNFFEEVFVELEEKYGSIEEMNVCDNLGDHLVGNVYIKFH 119
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+EE A A++ L R+++G+PI+ E S VTDFREA CRQ+E C RGG+CNFMH+K I
Sbjct: 120 KEEDAEKAVNDLNNRWFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 179
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDR 280
R+LR +L+GR ++ RSRS P +R+RR G R+ R RDR
Sbjct: 180 RELRRRLYGRKEKKKRSRS-PP-----TRNRRGGSRE--RHGRDR 216
>gi|428672035|gb|EKX72950.1| U2 snrnp auxiliary factor, small subunit, putative [Babesia equi]
Length = 243
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 169/267 (63%), Gaps = 34/267 (12%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H +P+ S TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRAHYKPSASQTLVIRHMYQNPPVAI- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ I K +HFE+F+E++F EL K+GEIE + VCDN+ DH+IGNVYV++
Sbjct: 60 -AIAEGQMISDELLDKAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYS 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E A+ A+ +L GR+Y GRPI E++PVTDFREA CRQF + C RGGYCNFMH+K I
Sbjct: 119 DESAASRAVTSLSGRYYGGRPIQAEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHIP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R LR KL R + P + R R SYR+R S
Sbjct: 179 RSLRRKLM--------KRMYEEYPEYKKRSPRS-------SYRNR--------------S 209
Query: 296 SRSRTPVREGSEERRAKIEQWNREREE 322
P R+ SEERR I QWNRERE+
Sbjct: 210 GSPHRPKRQTSEERRDMIAQWNRERED 236
>gi|311334534|emb|CBN08648.1| U2 small nuclear RNA auxiliary factor 1 [Microcosmus squamiger]
Length = 206
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 143/186 (76%), Gaps = 3/186 (1%)
Query: 65 SIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG 124
SIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L +YQ P + V G
Sbjct: 1 SIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIMLQGLYQNPQINNCAV-PNG 59
Query: 125 QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAA 183
+ D ++QEH+++F+E++F EL K+G+IE +NVCDNL DH++GNVY++F +EE A A
Sbjct: 60 EVSD-LEMQEHYDEFFEEVFTELEDKYGDIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKA 118
Query: 184 LHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I RDLR KL+
Sbjct: 119 VNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRDLRRKLY 178
Query: 244 GRYRRR 249
GR + +
Sbjct: 179 GRRKEK 184
>gi|444514071|gb|ELV10521.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 229
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHNRPT S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSQTVALLNVYRNPQNSCQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D ++Q+H+ +F++++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADRSRCAGSDAEMQQHYHEFFQEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R++ GRPI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVVDLNNRWFHGRPIYAELSPVTDFREACCRQYETGECARGGFCNFMHLKPISRE 180
Query: 238 LRNKL 242
LR +L
Sbjct: 181 LRREL 185
>gi|241556280|ref|XP_002399674.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
gi|215499705|gb|EEC09199.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
Length = 256
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 139/200 (69%), Gaps = 15/200 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 119 GVDAQG-QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + ++QEHF++F+ED+F EL K+GEIE +NVCDNL DH++GNVYV+FR
Sbjct: 61 TADGSHREKYSSEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFE-------------ENNCNRG 223
EE A A+ L R+++G PI E SPVTDFREA CRQ+E C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRTTEASEECTRS 180
Query: 224 GYCNFMHVKLIGRDLRNKLF 243
G+CNFMH+K I R+LR +L+
Sbjct: 181 GFCNFMHLKPISRELRRELY 200
>gi|221056112|ref|XP_002259194.1| U2 snRNP auxiliary factor, small subunit [Plasmodium knowlesi
strain H]
gi|193809265|emb|CAQ39967.1| U2 snRNP auxiliary factor, small subunit,putative [Plasmodium
knowlesi strain H]
Length = 308
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/288 (48%), Positives = 186/288 (64%), Gaps = 28/288 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAV- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ ++ K +HFE+FYE++FEEL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMVEDEVLDKAADHFEEFYEEVFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ A A+ L GRFY+G+P+ +E++PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGR-------YRRRSRSRSFSPIPHLRSRHRRDGDRD-YRRSYRDRDYERSRR 287
R ++ KL+ R Y++R +++ S H S HR G RD +RR Y SRR
Sbjct: 179 RSVKRKLYKRMYKKFPEYKKRRKTKDGSEDGHYDS-HRDRGTRDKHRRDKYGDSYHSSRR 237
Query: 288 THSRSSTSS--------------RSRTPVREGSEERRAKIEQWNRERE 321
+ S S R + P RE S ERR KIE+WN+ERE
Sbjct: 238 RNRSRSRSRNRDDADGDSDGASRRHKYPRRENSAERREKIERWNKERE 285
>gi|422294712|gb|EKU22012.1| splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis
gaditana CCMP526]
Length = 313
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 139/197 (70%), Gaps = 8/197 (4%)
Query: 54 GRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
G AEHLA I GTE+D+VNCPFYFKIGACRHG+RCSR HN+P S TLLL +MY+ P
Sbjct: 61 GNSKGGAEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLKHMYKNP 120
Query: 114 DMITPGVDAQGQPIDPRKIQE--------HFEDFYEDIFEELSKFGEIECLNVCDNLADH 165
A+G+ P+ + FEDF+E+++EEL+KFGE+E ++VCDNL +H
Sbjct: 121 ASALFTAPARGERAAPQGANDATNQAGLDDFEDFFEEVYEELAKFGEVEGMHVCDNLGEH 180
Query: 166 MIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGY 225
MIGNVY ++ +EE+A A AL GRFY+GR + VEFSPVTDFREA CRQ++E C G Y
Sbjct: 181 MIGNVYAKYADEEEADEARQALNGRFYAGRVLEVEFSPVTDFREARCRQYDEGQCTYGPY 240
Query: 226 CNFMHVKLIGRDLRNKL 242
CNF+HVK I R LR L
Sbjct: 241 CNFLHVKTISRALRRDL 257
>gi|410906165|ref|XP_003966562.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 223
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 140/187 (74%), Gaps = 5/187 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
DA + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GN FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRRE 116
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 117 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 176
Query: 238 LRNKLFG 244
LR +L+G
Sbjct: 177 LRRELYG 183
>gi|432095948|gb|ELK26863.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 248
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 139/185 (75%), Gaps = 1/185 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIF TEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFHTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPKNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH++ F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDAFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 238 LRNKL 242
LR +L
Sbjct: 181 LRREL 185
>gi|340377156|ref|XP_003387096.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Amphimedon
queenslandica]
Length = 227
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 138/186 (74%), Gaps = 2/186 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLHN+PT S T++L NMYQ P+ T
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQNMYQNPNNSTQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+ P Q H+E+F+ED+F E K+G IE +NVCDNL DH++GNVY++FR E
Sbjct: 61 NPSGL-MTVSPEVEQAHYEEFFEDVFIECEEKYGPIEKMNVCDNLGDHLVGNVYIKFRFE 119
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ +L R+++G PI E SPVTDF+EA CRQ++ C RGG+CNFMH+K I R+
Sbjct: 120 EDAEKAVQSLNNRWFNGHPIHAELSPVTDFKEACCRQYDMGECTRGGFCNFMHLKPISRE 179
Query: 238 LRNKLF 243
L+ L+
Sbjct: 180 LKRFLY 185
>gi|427787701|gb|JAA59302.1| Putative u2 small nuclear riboprotein auxiliary factor 38
[Rhipicephalus pulchellus]
Length = 253
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 139/200 (69%), Gaps = 15/200 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 119 GVDAQGQP-IDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + ++QEHF++F+ED+F EL K+GEIE +NVCDNL DH++GNVYV+FR
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFE-------------ENNCNRG 223
EE A A+ L R+++G PI E SPVTDFREA CRQ+E C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTAATEECTRS 180
Query: 224 GYCNFMHVKLIGRDLRNKLF 243
G+CNFMH+K I R+LR +L+
Sbjct: 181 GFCNFMHLKPISRELRRELY 200
>gi|160358766|sp|Q8WU68.2|U2AF4_HUMAN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
protein 3; Short=U2 small nuclear RNA auxiliary factor
1-like protein 3; Short=U2AF1-like protein 3
Length = 220
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 148/210 (70%), Gaps = 1/210 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH++ F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 121 EDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 180
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRR 267
L+ +L+GR RR F H R R+ R
Sbjct: 181 LQRQLYGRGPRRRSPPRFHTGHHPRERNHR 210
>gi|355755732|gb|EHH59479.1| U2 auxiliary factor 26 [Macaca fascicularis]
Length = 220
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
M E+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MGEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH++ F+E++F EL K+GEIE +N+CD+L DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 180
Query: 238 LRNKLFGRYRRR 249
L +L+G+ RR
Sbjct: 181 LWRQLYGQGPRR 192
>gi|389583734|dbj|GAB66468.1| U2 snRNP auxiliary factor small subunit, partial [Plasmodium
cynomolgi strain B]
Length = 307
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/292 (47%), Positives = 187/292 (64%), Gaps = 32/292 (10%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAV- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ ++ K +HFE+FYE++FEEL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMVEDEVLDKAADHFEEFYEEVFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ A A+ L GRFY+G+P+ +E++PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGR-------YRRRSRSRSFSPIPHLRSRHRRDGDRDYRR--SYRDRDYERSR 286
R ++ KL+ R Y++R +++ S H S HR G RD R Y D + R
Sbjct: 179 RAVKRKLYKRMYKKFPEYKKRRKTKDGSEDGHHDS-HRDRGSRDKHRRDKYGDSHHSSRR 237
Query: 287 RTHSRSSTSS-----------------RSRTPVREGSEERRAKIEQWNRERE 321
R SRS + + R + P RE S ERR KIE+WN+ERE
Sbjct: 238 RNRSRSRSRNRSRNRDDADGDSDGASRRHKHPRRENSAERREKIERWNKERE 289
>gi|156098591|ref|XP_001615311.1| U2 snRNP auxiliary factor, small subunit [Plasmodium vivax Sal-1]
gi|148804185|gb|EDL45584.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
vivax]
Length = 316
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 180/298 (60%), Gaps = 48/298 (16%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAV- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ ++ K +HFE+FYE++FEEL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMVEDEVLDKAADHFEEFYEEVFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ A A+ L GRFY+G+P+ +E++PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHR-RDGDRD-YRRSYRDRDYERSRRTHSRSS 293
R ++ KL+ R + P + R + +DG D Y S+RDR SR H R
Sbjct: 179 RAVKRKLY--------KRMYKKFPEYKKRRKTKDGSEDGYHDSHRDRG---SRDKHRRDK 227
Query: 294 TSS------------------------------RSRTPVREGSEERRAKIEQWNRERE 321
R + P RE S ERR KIE+WN+ERE
Sbjct: 228 YGDSHHSSRRRNRSRSRSRNRDDADGDSDGASRRHKHPRRENSAERREKIERWNKERE 285
>gi|324504738|gb|ADY42042.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 255
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 148/204 (72%), Gaps = 4/204 (1%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116
L+ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H+RPT SPT+LL N Y P +
Sbjct: 15 LSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVD 74
Query: 117 TPGVDA--QGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQ 173
DA + DP + Q++F++FYE++F EL K+GEI+ +NVC+N+ +HMIGNVYV+
Sbjct: 75 VRQADAFDKVGKKDPEE-QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVK 133
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKL 233
F EE A A+ LQ R+++G+PI E SPVTDFREA CRQ E C++GG+CNFMH+K
Sbjct: 134 FVREEDAEKAVKDLQNRWFNGQPIYAELSPVTDFREARCRQHEVTTCSKGGFCNFMHLKA 193
Query: 234 IGRDLRNKLFGRYRRRSRSRSFSP 257
I +L ++L+GR R + P
Sbjct: 194 ISPELGDRLYGRRGRYADEAGHYP 217
>gi|324521720|gb|ADY47915.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 253
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 145/205 (70%), Gaps = 2/205 (0%)
Query: 55 RGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPD 114
+GL+ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR HNRPT SPT+LL N Y P
Sbjct: 15 QGLSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHNRPTFSPTILLQNFYHNPV 74
Query: 115 MITPGVDAQGQPIDPRKI-QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYV 172
+ DA + + Q +F++FYE++F EL K+GEI+ +NVC+N+ +HMIGNVYV
Sbjct: 75 VDLRQADAFDKVGKKNEEEQAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYV 134
Query: 173 QFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
+F EE A A+ L+ R+++G+PI VE SPVTDFRE+ CRQ E C +GG+CNFMH+K
Sbjct: 135 KFMREEDAEKAVKDLENRWFNGQPIYVELSPVTDFRESRCRQHEITTCCKGGFCNFMHLK 194
Query: 233 LIGRDLRNKLFGRYRRRSRSRSFSP 257
I L KLFGR R + P
Sbjct: 195 AISPALGEKLFGRRGRYADEAGHYP 219
>gi|12842455|dbj|BAB25609.1| unnamed protein product [Mus musculus]
Length = 239
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
E A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPI 177
>gi|312066026|ref|XP_003136074.1| hypothetical protein LOAG_00486 [Loa loa]
Length = 346
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 142/194 (73%), Gaps = 6/194 (3%)
Query: 56 GLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
GL+ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H+RPT SPT+LL N Y P +
Sbjct: 114 GLSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIV 173
Query: 116 ITPGVDA---QGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVY 171
DA G+ D Q +F++FYE++F EL K+GEI+ +NVC+N+ +HMIGNVY
Sbjct: 174 DVRQADAFDKVGKKNDEE--QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVY 231
Query: 172 VQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
V+F EE A A+ L+ R+++G+PI E SPVTDFRE+ CRQ E C +GG+CNFMH+
Sbjct: 232 VKFMREEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHL 291
Query: 232 KLIGRDLRNKLFGR 245
K I +L KLFGR
Sbjct: 292 KAISPELGEKLFGR 305
>gi|403223158|dbj|BAM41289.1| U2 snRNP auxiliary factor [Theileria orientalis strain Shintoku]
Length = 242
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/266 (48%), Positives = 167/266 (62%), Gaps = 34/266 (12%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P+ + TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAI- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ I K +HFE+F+E++F EL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMISDELLDKAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E A A+ +L GR+Y GRPI E++PVTDFREA CRQF E C RGGYCNFMH+K +
Sbjct: 119 DESAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R LR KL R + P + R R R+ RS
Sbjct: 179 RSLRRKLM--------KRMYEEFPEYKRRSPRGSHRNRSRS------------------- 211
Query: 296 SRSRTPVREGSEERRAKIEQWNRERE 321
+ P R+ SEERR IEQWNRERE
Sbjct: 212 --PQRPKRQTSEERRDMIEQWNRERE 235
>gi|195155565|ref|XP_002018674.1| GL25824 [Drosophila persimilis]
gi|194114827|gb|EDW36870.1| GL25824 [Drosophila persimilis]
Length = 309
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|242014352|ref|XP_002427855.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
gi|212512324|gb|EEB15117.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
Length = 253
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTTLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A++ L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|328875135|gb|EGG23500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 447
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 142/213 (66%), Gaps = 25/213 (11%)
Query: 59 MAEHLASIFGTEKD------------------RVNCPFYFKIGACRHGDRCSRLHNRPTI 100
MA+ A++FGTEKD R NCPFY KIGACRHGDRCSRLHN+P +
Sbjct: 1 MADRRAAMFGTEKDHTNHIFSIYSFFLFFLSIRQNCPFYLKIGACRHGDRCSRLHNKPIV 60
Query: 101 SPTLLLSNMYQRPDMITPGVDAQGQP---IDPRKIQEHFEDFYEDIFEELSKFGEIECLN 157
S T++L N+YQ P + Q QP +IQ+HF++FYED+ E LSK+G +E ++
Sbjct: 61 SHTVILPNLYQSPYLRR----GQNQPPVQATQEEIQKHFDEFYEDLHEGLSKYGRVELMH 116
Query: 158 VCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEE 217
VC NL DH+IGNVYV++ EE A AA+ L+GRFY GRPI+ EFSPVTDF E+ CRQF+
Sbjct: 117 VCANLGDHLIGNVYVKYDTEEAAGAAVEGLRGRFYDGRPIVAEFSPVTDFNESRCRQFDM 176
Query: 218 NNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRS 250
C+RGGYCNFMH+ L + L KLFG R S
Sbjct: 177 GTCDRGGYCNFMHLHLPSKPLSIKLFGDRRSPS 209
>gi|170595997|ref|XP_001902599.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158589634|gb|EDP28552.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 248
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 142/194 (73%), Gaps = 6/194 (3%)
Query: 56 GLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
GL+ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H+RPT SPT+LL N Y P +
Sbjct: 16 GLSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIV 75
Query: 116 ITPGVDA---QGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVY 171
DA G+ D Q +F++FYE++F EL K+GEI+ +NVC+N+ +HMIGNVY
Sbjct: 76 DVRQADAFDKVGKKNDEE--QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVY 133
Query: 172 VQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
V+F EE A A+ L+ R+++G+PI E SPVTDFRE+ CRQ E C +GG+CNFMH+
Sbjct: 134 VKFLREEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHL 193
Query: 232 KLIGRDLRNKLFGR 245
K I +L +LFGR
Sbjct: 194 KAISPELGERLFGR 207
>gi|194766557|ref|XP_001965391.1| GF24893 [Drosophila ananassae]
gi|190618001|gb|EDV33525.1| GF24893 [Drosophila ananassae]
Length = 267
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|402592968|gb|EJW86895.1| U2 snRNP splicing factor small subunit [Wuchereria bancrofti]
Length = 248
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 145/206 (70%), Gaps = 6/206 (2%)
Query: 56 GLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
GL+ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H+RPT SPT+LL N Y P +
Sbjct: 16 GLSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIV 75
Query: 116 ITPGVDA---QGQPIDPRKIQEHFEDFYEDIFEELSK-FGEIECLNVCDNLADHMIGNVY 171
DA G+ D Q +F++FYE++F EL K +GEI+ +NVC+N+ +HMIGNVY
Sbjct: 76 DVRQADAFDKVGKKNDEE--QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVY 133
Query: 172 VQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
V+F EE A A+ L+ R+++G+PI E SPVTDFRE+ CRQ E C +GG+CNFMH+
Sbjct: 134 VKFLREEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHL 193
Query: 232 KLIGRDLRNKLFGRYRRRSRSRSFSP 257
K I +L +LFGR R + P
Sbjct: 194 KAISPELGERLFGRRGRYADEAGHYP 219
>gi|195035315|ref|XP_001989123.1| GH10217 [Drosophila grimshawi]
gi|193905123|gb|EDW03990.1| GH10217 [Drosophila grimshawi]
Length = 273
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|355703446|gb|EHH29937.1| U2 auxiliary factor 26 [Macaca mulatta]
Length = 220
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
M E+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MGEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH++ F+E++F EL K+GEIE +N+CD+L DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 180
Query: 238 LRNKLF 243
LR +++
Sbjct: 181 LRRQVY 186
>gi|313227857|emb|CBY23006.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 144/200 (72%), Gaps = 8/200 (4%)
Query: 58 AMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMIT 117
A AE+LASIFGTEKD+VNC FYFKIGAC +GDRCSRLHN+PT S T+LL N+Y+ P +
Sbjct: 5 AGAEYLASIFGTEKDKVNCSFYFKIGACHYGDRCSRLHNKPTFSQTMLLQNLYRSPIL-- 62
Query: 118 PGVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFRE 176
D GQ I +Q+H+++FYE++F E+ K+GEIE +NVC+NL DH++GNVY++F
Sbjct: 63 --DDDSGQQITETMLQQHYDEFYEEVFFEIEDKYGEIEEMNVCENLGDHLVGNVYIKFYR 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
EE A + R++ +PI+ E SPVT+FREA CR +E C RGG+CNFMH+K I +
Sbjct: 121 EEDCEKAAEGVNDRWFGMQPIVGELSPVTNFREACCRDYEMGECTRGGFCNFMHLKPISK 180
Query: 237 DLRNKLFGRYRRRSRSRSFS 256
DLR KL Y ++ + R ++
Sbjct: 181 DLRKKL---YAKKDKHRGYN 197
>gi|225581058|gb|ACN94635.1| GA17536 [Drosophila miranda]
Length = 290
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|198476714|ref|XP_001357453.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
gi|198137818|gb|EAL34522.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
Length = 289
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|209882274|ref|XP_002142574.1| U2 snRNP auxiliary factor small subunit [Cryptosporidium muris
RN66]
gi|209558180|gb|EEA08225.1| U2 snRNP auxiliary factor small subunit, putative [Cryptosporidium
muris RN66]
Length = 255
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 174/269 (64%), Gaps = 20/269 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H +PT SPT+++ +MY+ I+
Sbjct: 1 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPTNSPTVIIRHMYENSP-ISL 59
Query: 119 GVDAQGQPIDPRKIQEHFED----FYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
+ A+GQ +D K+ ++ D FYE+IFEEL+K+GEI L VCDN+ DHMIGNVYV++
Sbjct: 60 AI-AEGQVVDD-KLADNESDRFEEFYEEIFEELAKYGEISDLLVCDNIGDHMIGNVYVRY 117
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
EE A +AL L+GR YSG+ I E SPV+DF+EA CRQF + CNRGGYCNFMH+K I
Sbjct: 118 TNEEYAKSALDKLKGRSYSGKLIDAELSPVSDFKEARCRQFIDGCCNRGGYCNFMHIKHI 177
Query: 235 GRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSST 294
R ++NK+F + R S ++ DR YR D +R
Sbjct: 178 PRCVKNKIFQQMYRDHPEYS-----------KKKSDR--YSDYRHDDLKRELLDDDDRYD 224
Query: 295 SSRSRTPVREGSEERRAKIEQWNREREEN 323
++ +R+ SEERR IE WN++R N
Sbjct: 225 YTKHTKYIRQSSEERRQMIEMWNKQRNIN 253
>gi|195386376|ref|XP_002051880.1| GJ17240 [Drosophila virilis]
gi|194148337|gb|EDW64035.1| GJ17240 [Drosophila virilis]
Length = 267
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|195434328|ref|XP_002065155.1| GK14823 [Drosophila willistoni]
gi|194161240|gb|EDW76141.1| GK14823 [Drosophila willistoni]
Length = 287
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|195114476|ref|XP_002001793.1| GI15018 [Drosophila mojavensis]
gi|193912368|gb|EDW11235.1| GI15018 [Drosophila mojavensis]
Length = 274
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A A + L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|118781916|ref|XP_311943.3| AGAP002956-PA [Anopheles gambiae str. PEST]
gi|116129321|gb|EAA08115.3| AGAP002956-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|157114089|ref|XP_001657976.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108877446|gb|EAT41671.1| AAEL006713-PA [Aedes aegypti]
Length = 246
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|170063641|ref|XP_001867190.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167881198|gb|EDS44581.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 249
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|170035423|ref|XP_001845569.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167877385|gb|EDS40768.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 217
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 119 GVDAQG--QPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFR 175
D + ++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A L R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 236 RD 237
R+
Sbjct: 181 RE 182
>gi|99014572|emb|CAK22276.1| putative U2 snRNP auxiliary factor [Chenopodium rubrum]
Length = 151
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 117/128 (91%)
Query: 122 AQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAA 181
+QG IDPRKIQEHFEDFYED+FEEL+K+GEIE LN+CDNLADHM+GNVYVQ+REEE+AA
Sbjct: 9 SQGNAIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQYREEEEAA 68
Query: 182 AALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNK 241
A L GRFY+GRPIIV+FSPVTDFREATCRQ+EENNCNRGGYCNFMH+K I R+LR +
Sbjct: 69 NAHRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRISRELRRQ 128
Query: 242 LFGRYRRR 249
LFGRYRRR
Sbjct: 129 LFGRYRRR 136
>gi|71027337|ref|XP_763312.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small subunit
[Theileria parva strain Muguga]
gi|68350265|gb|EAN31029.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Theileria parva]
Length = 235
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/266 (48%), Positives = 168/266 (63%), Gaps = 38/266 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P+ + TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAI- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ I K +HFE+F+E++F EL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMISDELLDKAADHFEEFFEEVFLELMKYGEIEDMIVCDNIGDHIIGNVYIKYS 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E A A+ +L GR+Y GRPI E++PVTDFREA CRQF E C RGGYCNFMH+K +
Sbjct: 119 DEAAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R LR KL +R + P + R R RS++
Sbjct: 179 RSLRRKLM--------TRMYQEFPEYKKRTPR----------------------HRSASP 208
Query: 296 SRSRTPVREGSEERRAKIEQWNRERE 321
R + R+ SEERR IEQWNRERE
Sbjct: 209 YRRK---RQTSEERRDMIEQWNRERE 231
>gi|85000529|ref|XP_954983.1| U2 snRNP auxiliary factor [Theileria annulata strain Ankara]
gi|65303129|emb|CAI75507.1| U2 snRNP auxiliary factor, putative [Theileria annulata]
Length = 236
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/266 (49%), Positives = 168/266 (63%), Gaps = 38/266 (14%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P+ + TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAI- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ I K +HFE+F+E++F EL K+GEIE + VCDN+ DH+IGNVY+++
Sbjct: 60 -AIAEGQMISDELLDKAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYIKYS 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E A A+ +L GR+Y GRPI E++PVTDFREA CRQF E C RGGYCNFMH+K +
Sbjct: 119 DESAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R LR KL +R + P + R Y RS Y+R R+T
Sbjct: 179 RSLRRKLM--------TRMYQEFPEYKKR------IPYHRS--GSPYKRKRQT------- 215
Query: 296 SRSRTPVREGSEERRAKIEQWNRERE 321
SEERR IEQWNRERE
Sbjct: 216 ----------SEERRDMIEQWNRERE 231
>gi|294936347|ref|XP_002781727.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239892649|gb|EER13522.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 278
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR HNRP S T+LL MYQ P
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIA 60
Query: 119 GVDAQGQPID-PRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
+ Q P + QEHFE FYE++F EL+ +GEIE L V DN+ DHMIGNVYV++ +E
Sbjct: 61 LAEGQDIPDEQADAAQEHFEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYVKE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
E A + L GRFY+GR I E+SPVTDF EA CRQF++ C+RGG+CNF+H K +
Sbjct: 121 ESAEMCIQKLTGRFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|224011894|ref|XP_002294600.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
gi|220969620|gb|EED87960.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
Length = 197
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 133/182 (73%), Gaps = 6/182 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP----- 113
MA LA I GTE+D+VNCPFYFKIGACRH DRCSR+H+RP SPT+L+ ++Y+ P
Sbjct: 1 MARRLAQIHGTEEDKVNCPFYFKIGACRHADRCSRIHHRPAFSPTILIKHIYRHPLREAE 60
Query: 114 -DMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYV 172
+ G G +D + +E F F+ED FEELSKFG +E L++CDNL DHM+G+VY
Sbjct: 61 LKAASEGRAVDGIEVDEAEAREDFLVFFEDFFEELSKFGRLEALHICDNLGDHMVGHVYA 120
Query: 173 QFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
+F +EE+AA AL+ + GRFY GR + VEFSPVTDFREA CR F+E C RGG+CNF+H+K
Sbjct: 121 KFSDEEEAADALNVMNGRFYDGRKMEVEFSPVTDFREARCRDFDEETCRRGGFCNFLHIK 180
Query: 233 LI 234
+
Sbjct: 181 PV 182
>gi|17544466|ref|NP_503036.1| Protein UAF-2 [Caenorhabditis elegans]
gi|5832799|emb|CAB55137.1| Protein UAF-2 [Caenorhabditis elegans]
Length = 285
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 148/207 (71%), Gaps = 4/207 (1%)
Query: 54 GRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
G GL+ AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H+ PT SPT++L N Y P
Sbjct: 4 GDGLSGAEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNP 63
Query: 114 DMITPGVDAQGQPIDPRKIQE--HFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNV 170
+ DA + + R QE +F+DFYE++F E+ K+GE+E +NVC+N+ +HM+GNV
Sbjct: 64 VVDVRQADAFDK-VGKRNDQEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNV 122
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH 230
YV+F +EE A A + L R+++G+PI E PVTDFRE+ CRQ E C++GG+CNFMH
Sbjct: 123 YVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMH 182
Query: 231 VKLIGRDLRNKLFGRYRRRSRSRSFSP 257
+K I +L ++L+GR RR+ + P
Sbjct: 183 LKAISAELGDRLYGRRGRRADAAGHYP 209
>gi|328770702|gb|EGF80743.1| hypothetical protein BATDEDRAFT_11284 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 128/174 (73%), Gaps = 6/174 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
A+HLASI+GTEKD+VNC FYFKIGACRHGDRCSR H +P S TLL+ N+Y P
Sbjct: 1 FADHLASIYGTEKDKVNCSFYFKIGACRHGDRCSRKHVKPNFSQTLLIPNLYLNP----- 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G + P +IQE+F+ +ED+F EL+K+GE+E +N+CDN+ DH+IGNVY +F+ EE
Sbjct: 56 -AHNPGCTMTPDEIQENFDLLFEDLFMELAKYGELEDMNICDNVGDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
A A+ +L RFY+GRP+ E SPVTDF EA CRQ+E C RGG+CNFMH+K
Sbjct: 115 DAGNAVESLNNRFYAGRPLYAELSPVTDFGEACCRQYELGECTRGGFCNFMHIK 168
>gi|301791706|ref|XP_002930821.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 290
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 140/195 (71%), Gaps = 4/195 (2%)
Query: 53 AGRGLAMA---EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNM 109
A GL+ A + A GTEK+RVNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+
Sbjct: 42 ASLGLSTACPTGYTAQGAGTEKERVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNI 101
Query: 110 YQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIG 168
Y+ P D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++G
Sbjct: 102 YRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVG 161
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
NVYV+FR EE A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNF
Sbjct: 162 NVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNF 221
Query: 229 MHVKLIGRDLRNKLF 243
MH+K I R+LR +L+
Sbjct: 222 MHLKPISRELRRELY 236
>gi|341886073|gb|EGT42008.1| CBN-UAF-2 protein [Caenorhabditis brenneri]
Length = 278
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 148/207 (71%), Gaps = 4/207 (1%)
Query: 54 GRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
G GL+ AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H+ PT SPT++L N Y P
Sbjct: 4 GDGLSGAEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNP 63
Query: 114 DMITPGVDAQGQPIDPRKIQE--HFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNV 170
+ DA + + R +E +F+DFYE++F E+ K+GE+E +NVC+N+ +HM+GNV
Sbjct: 64 VVDVRQADAFDK-VGKRNDEEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNV 122
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH 230
YV+F +EE A A + L R+++G+PI E PVTDFRE+ CRQ E C++GG+CNFMH
Sbjct: 123 YVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMH 182
Query: 231 VKLIGRDLRNKLFGRYRRRSRSRSFSP 257
+K I +L ++L+GR RR+ + P
Sbjct: 183 LKAISSELGDRLYGRRGRRADAAGHYP 209
>gi|402224397|gb|EJU04460.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 132/184 (71%), Gaps = 6/184 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL+N+Y P P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLNNVYHNP-AHDP 59
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
Q ++Q++F+ YED++ ELSKFG + L+VCDN+ DH+IGNVY ++ E
Sbjct: 60 NCKLSSQ-----ELQDNFDQLYEDLYIELSKFGHLLELHVCDNIGDHLIGNVYARYEWEA 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+A AA+ AL R+Y+GRP+ E SPVTDFREA CRQ E CNRGGYCNFMH+++ +DL
Sbjct: 115 EAQAAVDALNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGYCNFMHLRIASKDL 174
Query: 239 RNKL 242
L
Sbjct: 175 VKSL 178
>gi|268534530|ref|XP_002632396.1| C. briggsae CBR-UAF-2 protein [Caenorhabditis briggsae]
Length = 281
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 148/207 (71%), Gaps = 4/207 (1%)
Query: 54 GRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
G GL+ AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H+ PT SPT++L N Y P
Sbjct: 4 GDGLSGAEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNP 63
Query: 114 DMITPGVDAQGQPIDPRKIQE--HFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNV 170
+ DA + + R +E +F+DFYE++F E+ K+GE+E +NVC+N+ +HM+GNV
Sbjct: 64 VVDVRQADAFDK-VGKRNDEEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNV 122
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH 230
YV+F +EE A A + L R+++G+PI E PVTDFRE+ CRQ E C++GG+CNFMH
Sbjct: 123 YVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMH 182
Query: 231 VKLIGRDLRNKLFGRYRRRSRSRSFSP 257
+K I +L ++L+GR RR+ + P
Sbjct: 183 LKAISAELGDRLYGRRGRRADAAGHYP 209
>gi|308482690|ref|XP_003103548.1| CRE-UAF-2 protein [Caenorhabditis remanei]
gi|308259969|gb|EFP03922.1| CRE-UAF-2 protein [Caenorhabditis remanei]
Length = 287
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 148/207 (71%), Gaps = 4/207 (1%)
Query: 54 GRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
G GL+ AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H+ PT SPT++L N Y P
Sbjct: 4 GDGLSGAEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNP 63
Query: 114 DMITPGVDAQGQPIDPRKIQE--HFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNV 170
+ DA + + R +E +F+DFYE++F E+ K+GE+E +NVC+N+ +HM+GNV
Sbjct: 64 VVDVRQADAFDK-VGKRNDEEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNV 122
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH 230
YV+F +EE A A + L R+++G+PI E PVTDFRE+ CRQ E C++GG+CNFMH
Sbjct: 123 YVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMH 182
Query: 231 VKLIGRDLRNKLFGRYRRRSRSRSFSP 257
+K I +L ++L+GR RR+ + P
Sbjct: 183 LKAISAELGDRLYGRRGRRADAAGHYP 209
>gi|403293028|ref|XP_003937526.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Saimiri boliviensis
boliviensis]
Length = 268
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 147/205 (71%), Gaps = 2/205 (0%)
Query: 54 GRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
GR A+AE+LASIFGTEKD+VNC FY KIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 44 GRFPALAEYLASIFGTEKDKVNCSFYLKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNP 103
Query: 114 DMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYV 172
D + ++Q+H++ F+E++F EL K+GEIE +NV DNL +H++GN+YV
Sbjct: 104 QNTAQNADGSHCHVSDVELQQHYDSFFEEVFTELQEKYGEIEEMNVYDNLRNHLVGNIYV 163
Query: 173 QFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
+FR EE A A+ L R+++G+ + + SPVTDF E+ C Q+E C +GG+CNFMH++
Sbjct: 164 KFRREEDAERAVAELHNRWFNGQGVHAKLSPVTDFWESCCHQYEMGECTQGGFCNFMHLR 223
Query: 233 LIGRDLRNKLFGRYRR-RSRSRSFS 256
I R+LR +L+GR R RS RS +
Sbjct: 224 PISRNLRQQLYGRGPRCRSPPRSHT 248
>gi|294877742|ref|XP_002768104.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239870301|gb|EER00822.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--- 115
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR HNRP S T+LL MYQ P
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIA 60
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ G D + D QEHFE FYE++F EL+ +GEIE L V DN+ DHMIGNVYV++
Sbjct: 61 LAEGQDVADEQAD--AAQEHFEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYV 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
+EE + + L GRFY+GR I E+SPVTDF EA CRQF++ C+RGG+CNF+H K +
Sbjct: 119 KEESSEMCIQKLTGRFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|320590311|gb|EFX02754.1| u2 auxiliary factor small [Grosmannia clavigera kw1407]
Length = 208
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 142/211 (67%), Gaps = 18/211 (8%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ N+YQ P ++
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPANVSN 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G++A ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH++GNVY +F+ EE
Sbjct: 61 GMNAS-------QLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLVGNVYARFKYEE 113
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AA+A AL GR+Y+ RPI E SPVTDFREA CR C RGGYCNF+H K +L
Sbjct: 114 SAASACDALNGRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGYCNFIHRKNPSEEL 173
Query: 239 RN----------KLFGRYRRRSRSRSFSPIP 259
N KL GR RS SRS SP P
Sbjct: 174 DNELQLATKKWLKLRGR-DERSVSRSPSPEP 203
>gi|449303843|gb|EMC99850.1| hypothetical protein BAUCODRAFT_352847 [Baudoinia compniacensis
UAMH 10762]
Length = 210
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 142/210 (67%), Gaps = 14/210 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + +D ++Q HF+ FYEDI+ E++K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDTRARSMDASQLQNHFDAFYEDIWCEMNKYGELEELVVCDNNNDHLIGNVYARFKYEE 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR-- 236
A AA AL R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K
Sbjct: 116 SAQAASEALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEM 175
Query: 237 ----DLRNKLFGRYRRR---SRSRSFSPIP 259
+L K + R R R S SRS SP+P
Sbjct: 176 DRSLELATKKWLRARGRDAKSMSRSPSPVP 205
>gi|343424964|emb|CBQ68501.1| related to splicing factor U2AF 35 kd subunit [Sporisorium
reilianum SRZ2]
Length = 282
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 132/184 (71%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLASI+GTE+D+VNC FY+KIGACRHGDRCSR H RP S TLLLSN+Y+ P
Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRH--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
Q I ++Q F+ FYED+F EL+++G++ ++VCDN+ DH+IGNVY ++R E
Sbjct: 58 --HEQDCTITDTELQAQFDTFYEDMFVELAQYGQLVEMHVCDNVGDHLIGNVYARYRYEA 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ AL R+Y G+P+ E SPVTDF+EA CRQ E N CNRGG+CNFMH++ R +
Sbjct: 116 DAQRAVDALNDRWYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPI 175
Query: 239 RNKL 242
R +L
Sbjct: 176 RKQL 179
>gi|339238205|ref|XP_003380657.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976430|gb|EFV59727.1| conserved hypothetical protein [Trichinella spiralis]
Length = 254
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 138/202 (68%), Gaps = 26/202 (12%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--- 115
MAE+LASIFGTEKD+VNC FYFKIGACRHGD+CSR+HNRPT S T+LL N+YQ P M
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDKCSRIHNRPTFSQTILLQNLYQNPKMDIH 60
Query: 116 --------ITPGVDAQGQP--------------IDPRKIQEHFEDFYEDIFEEL-SKFGE 152
G D G+P + Q+HF++F+E+IF+E+ K+GE
Sbjct: 61 RAEAALFCCQFGRDVIGRPSTGALGELWWVMVGVTDSHEQQHFDEFFEEIFDEVEDKYGE 120
Query: 153 IECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
IE +NVCDN+ +HMIGNVY++F+ EE A A+ L R++ G PI E SPVTDFREA C
Sbjct: 121 IEEMNVCDNIGEHMIGNVYIKFKREEDAERAVKDLNTRWFGGMPIYAELSPVTDFREACC 180
Query: 213 RQFEENNCNRGGYCNFMHVKLI 234
RQ+E +C +GG+CNFMH+K I
Sbjct: 181 RQYEMGDCGKGGFCNFMHLKPI 202
>gi|444509612|gb|ELV09368.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 252
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 136/180 (75%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHNRPT S T++L +MY+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSQTIVLRHMYRNPQNPAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + Q+H+E+F++++F E+ ++GE+E +NVCDNL DH++GNVYV+F EE
Sbjct: 61 SADGVRGALSEAETQQHYEEFFQEVFTEMEEYGEVEEMNVCDNLGDHLVGNVYVKFGREE 120
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AL A+ R++ G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+L
Sbjct: 121 DAEKALVAVNSRWFHGQPIHAELSPVTDFREACCRQYETGACARGGFCNFMHLKPISREL 180
>gi|340371029|ref|XP_003384048.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Amphimedon
queenslandica]
Length = 188
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 136/187 (72%), Gaps = 8/187 (4%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FY KIGACRHGD+CSRLHN+PT S T++L N+YQ P T
Sbjct: 1 MAEYLASIFGTEKDKVNCAFYHKIGACRHGDQCSRLHNKPTFSQTVMLQNLYQNP---TR 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
G+ + P + Q HFE+F+ED+F E K+G IE ++VCDNL DH+IGNVY++FR E
Sbjct: 58 GITT----VSPEEEQSHFEEFFEDVFIECEEKYGPIEKMHVCDNLGDHLIGNVYIKFRFE 113
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ +L R+++ +P+ E SPVT+F+EA C QF+ C RGG+CNF H+K I
Sbjct: 114 EDAEKAVQSLNNRWFNAQPVRAELSPVTNFKEACCHQFDVGQCGRGGFCNFWHIKPIPHK 173
Query: 238 LRNKLFG 244
LR L+G
Sbjct: 174 LRRFLYG 180
>gi|281352323|gb|EFB27907.1| hypothetical protein PANDA_021410 [Ailuropoda melanoleuca]
Length = 178
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D + ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 60
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRR 249
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+GR R++
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKK 178
>gi|300176329|emb|CBK23640.2| unnamed protein product [Blastocystis hominis]
Length = 343
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 139/194 (71%), Gaps = 12/194 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+HL ++GTE+DRVNCPFYFKIGACRHGDRC+R HNRPT S T+L+ +MY P
Sbjct: 1 MADHLVRVYGTEEDRVNCPFYFKIGACRHGDRCTRKHNRPTFSQTILIPHMYHNPK---- 56
Query: 119 GVDAQGQPIDP----RKIQEHFEDFYEDIFEELSK-FGEIECLNVCDNLADHMIGNVYVQ 173
A G DP + IQ+ F++FYE++++ELS+ +G IE L+VCDNL DHMIGNVYV+
Sbjct: 57 ---ASGVTGDPSQAQQLIQQQFDEFYEEVYQELSQSYGPIEELHVCDNLNDHMIGNVYVK 113
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKL 233
F +EE A AL L R+Y+GRP+ E+SPVTDFREA CRQ EE C RGGYCNFMH+
Sbjct: 114 FEDEEDAEKALKGLTHRYYAGRPLAPEYSPVTDFREARCRQHEEGQCTRGGYCNFMHLMT 173
Query: 234 IGRDLRNKLFGRYR 247
+ + + F + R
Sbjct: 174 PSQPVFYRCFPKGR 187
>gi|325303588|tpg|DAA34232.1| TPA_inf: U2 snRNP splicing factor small subunit [Amblyomma
variegatum]
Length = 192
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 131/191 (68%), Gaps = 15/191 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 119 GVDAQGQP-IDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFRE 176
D + ++QEHF++F+ED+F EL K+GEIE +NVCDNL DH++GNVYV+FR
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFE-------------ENNCNRG 223
EE A A+ L R+++G PI E SPVTDFREA CRQ+E C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTTATEECTRS 180
Query: 224 GYCNFMHVKLI 234
G+CNFMH + I
Sbjct: 181 GFCNFMHPQPI 191
>gi|388858152|emb|CCF48220.1| related to splicing factor U2AF 35 kd subunit [Ustilago hordei]
Length = 284
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 131/184 (71%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASI+GTE+D+VNC FY+KIGACRHGDRCSR H RP S TLLLSN+Y+ P P
Sbjct: 1 MASYLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRHHEP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
I ++Q+ F+ FYED+F EL+K+GE+ ++VCDN+ DH+IGNVY +++ E
Sbjct: 61 DC-----TITDTELQQQFDAFYEDMFTELAKYGELVEMHVCDNVGDHLIGNVYARYKYET 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ AL R+Y G+P+ E SPVTDF+EA CRQ E N CNRGG+CNFMH++
Sbjct: 116 DAQLAVDALNDRWYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPT 175
Query: 239 RNKL 242
R +L
Sbjct: 176 RKEL 179
>gi|167526258|ref|XP_001747463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774298|gb|EDQ87930.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 137/197 (69%), Gaps = 16/197 (8%)
Query: 58 AMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMIT 117
+MAEHLASIFGTEKD+VNC FY+KIGACRHGDRCSRLHN+PT S T+L+ N+YQ P I
Sbjct: 187 SMAEHLASIFGTEKDKVNCSFYYKIGACRHGDRCSRLHNKPTFSQTILMQNLYQNP--IN 244
Query: 118 PGVDAQGQP---IDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQ 173
V G+P + ++QEHF+ FY DIF EL K+G +E +NVCDNL DH++GNVYV
Sbjct: 245 TPVMPDGRPGHSLSKGELQEHFDRFYADIFWELEEKYGAVEDMNVCDNLGDHLVGNVYVM 304
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKL 233
F +E A+ L R+Y VTDFREA CRQ+E++ C RGG+CNFMH++
Sbjct: 305 FENDEDGEKAVLDLNNRWYG----------VTDFREACCRQYEKSECTRGGFCNFMHLRK 354
Query: 234 IGRDLRNKLFGRYRRRS 250
+G +++ L+G R S
Sbjct: 355 LGDNMQKTLYGNRVRPS 371
>gi|390601914|gb|EIN11307.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 132/184 (71%), Gaps = 6/184 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P+ S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPSFSQTILLPNVYH-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D Q + +++QE F+ YED++ ELSKFG + L+VCDN+ DH+IGNVY ++ E
Sbjct: 56 AHDPVCQ-LTEQQLQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L ++L
Sbjct: 115 EAQAAVDNLNNRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
Query: 239 RNKL 242
L
Sbjct: 175 VKSL 178
>gi|399217872|emb|CCF74759.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 169/267 (63%), Gaps = 36/267 (13%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHG++CSR H RP+ + T+++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGEQCSRSHYRPSSAQTIVIKHMYQNPPIAI- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
++GQ + + +HFE+F+E++F EL K+GE+E + VCDN+ DH+IGNVYV++
Sbjct: 60 -AISEGQMVSDEVYDQAADHFEEFFEEVFLELCKYGEVEDMIVCDNIGDHIIGNVYVKYS 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E AA A+ L GRFY G+ I+VE++PVTDFREA CRQF + C RGGYCNFMHVK +
Sbjct: 119 DEMSAANAISTLSGRFYGGKQIMVEYTPVTDFREARCRQFVDGQCKRGGYCNFMHVKHVP 178
Query: 236 RDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTS 295
R LR KL ++ ++ PH + R S
Sbjct: 179 RSLRRKLM--------NKMYTDYPHYKKS-----------------------RSPRRRRS 207
Query: 296 SRSRTPVREGSEERRAKIEQWNREREE 322
S P R+ S+ERRA IEQWNRERE+
Sbjct: 208 RSSSPPKRQSSQERRAMIEQWNREREK 234
>gi|389741909|gb|EIM83097.1| splicing factor U2AF subunit [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 133/186 (71%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ P+++Q+ F+ YED++ ELSKFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTPKELQDGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L +
Sbjct: 113 ETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASK 172
Query: 237 DLRNKL 242
+L + L
Sbjct: 173 ELVSSL 178
>gi|443897457|dbj|GAC74797.1| U2 snRNP splicing factor, small subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 271
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 132/184 (71%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASI+GTE+D+VNC FY+KIGACRHGDRCSR H RP S TLLLSN+Y+ P
Sbjct: 1 MASYLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRH--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
Q I ++Q F++FYED+F EL+K+GE++ ++VCDN+ DH+IGNVY +++ E
Sbjct: 58 --HEQDCAITDAELQAQFDEFYEDMFCELAKYGELQEMHVCDNVGDHLIGNVYARYKYEA 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ AL R+Y +P+ E SPVTDF+EA CRQ E N CNRGG+CNFMH++ L
Sbjct: 116 DAQLAVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPL 175
Query: 239 RNKL 242
R +L
Sbjct: 176 RKQL 179
>gi|145228481|ref|XP_001388549.1| splicing factor U2AF subunit [Aspergillus niger CBS 513.88]
gi|134054638|emb|CAK43483.1| unnamed protein product [Aspergillus niger]
gi|350637745|gb|EHA26101.1| hypothetical protein ASPNIDRAFT_55496 [Aspergillus niger ATCC 1015]
Length = 209
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 140/208 (67%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
RDLR K R +RS S SP P
Sbjct: 175 DRDLRLSTKKWLKERGRDARSVSRSPSP 202
>gi|353245348|emb|CCA76358.1| related to splicing factor U2AF 35 kd subunit [Piriformospora
indica DSM 11827]
Length = 217
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H RP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNP----- 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ + +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY +F E
Sbjct: 56 -ANDPNCKLSAKELQEGFDAVYEDLYCELTKFGHLLELHVCDNVGDHLIGNVYARFEWET 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L +L
Sbjct: 115 EAQAAVDNLNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPEL 174
Query: 239 RNKL 242
+ L
Sbjct: 175 KKSL 178
>gi|326913392|ref|XP_003203022.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Meleagris
gallopavo]
Length = 243
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 133/184 (72%), Gaps = 1/184 (0%)
Query: 61 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV 120
E + + FG RVNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 9 EQVCNYFGFYTCRVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA 68
Query: 121 DAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE
Sbjct: 69 DGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 128
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLR 239
A A+ L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR
Sbjct: 129 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 188
Query: 240 NKLF 243
+L+
Sbjct: 189 RELY 192
>gi|71019619|ref|XP_760040.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
gi|46099833|gb|EAK85066.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
Length = 279
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 131/184 (71%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASI+GTE+D+VNC FY+KIGACRHGDRCSR H RP S TLLLSN+Y+ P
Sbjct: 1 MASYLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRH--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
Q I ++Q F+ FYED+F EL+K+G++ ++VCDN+ DH+IGNVY +++ E
Sbjct: 58 --HEQDCTITDTELQAQFDAFYEDMFTELAKYGQLVEMHVCDNVGDHLIGNVYARYKYEA 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ AL R+Y +P+ E SPVTDF+EA CRQ E N CNRGG+CNFMH++ R +
Sbjct: 116 DAQRAVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPI 175
Query: 239 RNKL 242
R +L
Sbjct: 176 RKEL 179
>gi|19115857|ref|NP_594945.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe 972h-]
gi|6136086|sp|Q09176.2|U2AF1_SCHPO RecName: Full=Splicing factor U2AF 23 kDa subunit; AltName: Full=U2
auxiliary factor 23 kDa subunit; Short=U2AF23; AltName:
Full=U2 snRNP auxiliary factor small subunit
gi|2347143|gb|AAC49805.1| spU2AF23 [Schizosaccharomyces pombe]
gi|5834791|emb|CAB55173.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe]
Length = 216
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 124/174 (71%), Gaps = 5/174 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLASI+GTE+D+VNC FY+KIGACRHG+RCSR H +P S T+L NMY+ P
Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIH--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ G+ R++ E F+ FYED+F E SK+GE+E L VCDN+ DH++GNVYV+F+ EE
Sbjct: 58 --EPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEE 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
A A+ L R+YS RP+ E SPVTDFREA CRQ E + C RGG CNFMH K
Sbjct: 116 SAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAK 169
>gi|170117299|ref|XP_001889837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635177|gb|EDQ99488.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 229
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 132/186 (70%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ ELSKFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTEKELQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ + R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L +
Sbjct: 113 ETEAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASK 172
Query: 237 DLRNKL 242
DL + L
Sbjct: 173 DLVSSL 178
>gi|392593590|gb|EIW82915.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 231
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 130/186 (69%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H RP S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY +F
Sbjct: 61 CK--------LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARFEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L
Sbjct: 113 ETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASA 172
Query: 237 DLRNKL 242
DL L
Sbjct: 173 DLVRSL 178
>gi|302679412|ref|XP_003029388.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
gi|300103078|gb|EFI94485.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
Length = 228
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 132/186 (70%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H RP S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
++ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LNEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L +
Sbjct: 113 ETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASK 172
Query: 237 DLRNKL 242
+L L
Sbjct: 173 ELVESL 178
>gi|390478246|ref|XP_002761504.2| PREDICTED: uncharacterized protein LOC100415206 [Callithrix
jacchus]
Length = 933
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
+D+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D +
Sbjct: 706 EDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDV 765
Query: 131 KIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L
Sbjct: 766 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 825
Query: 190 RFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 826 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 879
>gi|426219497|ref|XP_004003958.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Ovis aries]
Length = 332
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 140/202 (69%), Gaps = 2/202 (0%)
Query: 44 QDKDSAVKFAGRGLAMAEHLASIFGTEKDR-VNCPFYFKIGACRHGDRCSRLHNRPTISP 102
Q K + ++ R + ++ T ++R VNC FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 67 QGKCAIIEQLIRTFIVKQYFGDYELTNRERQVNCSFYFKIGACRHGDRCSRLHNKPTFSQ 126
Query: 103 TLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDN 161
T+L+ N+Y+ P D + ++QEH+++F+E++F E+ K+GE+E +NVCDN
Sbjct: 127 TILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN 186
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCN 221
L DH++GNVYV+FR EE A A+ L R+++G+PI E SPVTDFREA CRQ+E C
Sbjct: 187 LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECT 246
Query: 222 RGGYCNFMHVKLIGRDLRNKLF 243
RGG+CNFMH+K I R+LR +L+
Sbjct: 247 RGGFCNFMHLKPISRELRRELY 268
>gi|336371539|gb|EGN99878.1| hypothetical protein SERLA73DRAFT_180138 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384299|gb|EGO25447.1| hypothetical protein SERLADRAFT_465605 [Serpula lacrymans var.
lacrymans S7.9]
Length = 230
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 132/186 (70%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H RP S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTEQELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L +
Sbjct: 113 ETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASK 172
Query: 237 DLRNKL 242
+L + L
Sbjct: 173 ELVSSL 178
>gi|67904750|ref|XP_682631.1| hypothetical protein AN9362.2 [Aspergillus nidulans FGSC A4]
gi|40747273|gb|EAA66429.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259488204|tpe|CBF87476.1| TPA: U2 auxiliary factor small subunit, putative (AFU_orthologue;
AFUA_3G02380) [Aspergillus nidulans FGSC A4]
Length = 209
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 140/208 (67%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R +RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|395851239|ref|XP_003798173.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Otolemur garnettii]
Length = 223
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 132/186 (70%), Gaps = 17/186 (9%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVY
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVY------ 114
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 115 ----------NNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 164
Query: 238 LRNKLF 243
LR +L+
Sbjct: 165 LRRELY 170
>gi|393217218|gb|EJD02707.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 231
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 131/186 (70%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H RP S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ + +QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTEKDLQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L +
Sbjct: 113 EAEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASK 172
Query: 237 DLRNKL 242
+L + L
Sbjct: 173 ELVDSL 178
>gi|115401000|ref|XP_001216088.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
gi|114190029|gb|EAU31729.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
Length = 209
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 140/208 (67%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R +RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|449546411|gb|EMD37380.1| hypothetical protein CERSUDRAFT_114053 [Ceriporiopsis subvermispora
B]
Length = 230
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 132/186 (70%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L +
Sbjct: 113 ETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASK 172
Query: 237 DLRNKL 242
+L + L
Sbjct: 173 ELVSSL 178
>gi|121712082|ref|XP_001273656.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119401808|gb|EAW12230.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 209
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 140/208 (67%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSAEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R +RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|449268664|gb|EMC79513.1| Splicing factor U2AF 35 kDa subunit, partial [Columba livia]
Length = 222
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P D + ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVSDVEM 60
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|355560252|gb|EHH16938.1| hypothetical protein EGK_13202, partial [Macaca mulatta]
gi|355747336|gb|EHH51833.1| hypothetical protein EGM_12135, partial [Macaca fascicularis]
Length = 226
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P D + ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVSDVEM 60
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast
(Schizosaccharomyces pombe)
Length = 200
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 124/174 (71%), Gaps = 5/174 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLASI+GTE+D+VNC FY+KIGACRHG+RCSR H +P S T+L NMY+ P
Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIH--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ G+ R++ E F+ FYED+F E SK+GE+E L VCDN+ DH++GNVYV+F+ EE
Sbjct: 58 --EPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEE 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
A A+ L R+YS RP+ E SPVTDFREA CRQ E + C RGG CNFMH K
Sbjct: 116 SAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAK 169
>gi|70986128|ref|XP_748561.1| U2 auxiliary factor small subunit [Aspergillus fumigatus Af293]
gi|66846190|gb|EAL86523.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
Af293]
gi|159128305|gb|EDP53420.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
A1163]
Length = 209
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|119474039|ref|XP_001258895.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119407048|gb|EAW16998.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 209
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|169778681|ref|XP_001823805.1| splicing factor U2AF subunit [Aspergillus oryzae RIB40]
gi|238499237|ref|XP_002380853.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|83772544|dbj|BAE62672.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692606|gb|EED48952.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|391870811|gb|EIT79981.1| U2 snRNP splicing factor, small subunit [Aspergillus oryzae 3.042]
Length = 209
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GEIE L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQLQNHFDAFYEDVWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R +RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSP 202
>gi|432116144|gb|ELK37266.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 244
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D + ++
Sbjct: 19 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 78
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 79 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 138
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 139 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 190
>gi|392570233|gb|EIW63406.1| splicing factor U2AF subunit [Trametes versicolor FP-101664 SS1]
Length = 230
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 130/186 (69%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CTKTE--------KELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L
Sbjct: 113 ETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPTP 172
Query: 237 DLRNKL 242
DL L
Sbjct: 173 DLARSL 178
>gi|212526104|ref|XP_002143209.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|242780019|ref|XP_002479507.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
gi|210072607|gb|EEA26694.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|218719654|gb|EED19073.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 141/210 (67%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P +IQ HF+ FYEDI+ E+ K+GEIE + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNK-MNPSQIQNHFDAFYEDIWCEMCKYGEIEEIVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AA AL R+Y+ RP+ E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQAACDALNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPTPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+ +L ++ RS SRS SP P
Sbjct: 175 QRELDLATKKWLKERGRDERSVSRSPSPEP 204
>gi|354484665|ref|XP_003504507.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Cricetulus
griseus]
Length = 238
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D + ++
Sbjct: 14 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 73
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 74 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 133
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 134 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|296415596|ref|XP_002837472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633344|emb|CAZ81663.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 139/208 (66%), Gaps = 15/208 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYED F E+ K+GE+E + VCDN DH+IGNVY +F+ EE
Sbjct: 56 AFDPKNK-MNTSQLQNHFDAFYEDFFCEMCKYGEVEEVVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +DL
Sbjct: 115 DAQTACDALNARWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSKDL 174
Query: 239 RNKL------FGRYR---RRSRSRSFSP 257
+L + R R RRS SRS SP
Sbjct: 175 ERELELGMKKWLRARGRDRRSVSRSVSP 202
>gi|431918574|gb|ELK17792.1| Splicing factor U2AF 26 kDa subunit [Pteropus alecto]
Length = 223
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 141/205 (68%), Gaps = 10/205 (4%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQ 133
VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P D + ++Q
Sbjct: 19 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTVVLLNLYRNPQNTAQTADGSHCHVSDVEVQ 78
Query: 134 EHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
EH+++F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR EE A A+ L R++
Sbjct: 79 EHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWF 138
Query: 193 SGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRY-RRRSR 251
+G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+LR +L+G+ + RS
Sbjct: 139 NGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGQGPKHRSP 198
Query: 252 SRSFSPIPHLRSRHRRDGDRDYRRS 276
RS H R +R+ RRS
Sbjct: 199 PRS--------QTHHRPQERNRRRS 215
>gi|345323475|ref|XP_001511817.2| PREDICTED: hypothetical protein LOC100080963 [Ornithorhynchus
anatinus]
Length = 350
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D + ++
Sbjct: 117 KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 176
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 177 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 236
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 237 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 288
>gi|440895568|gb|ELR47720.1| Splicing factor U2AF 35 kDa subunit, partial [Bos grunniens mutus]
Length = 223
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D + ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 60
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|431901449|gb|ELK08471.1| Splicing factor U2AF 35 kDa subunit, partial [Pteropus alecto]
Length = 226
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D + ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 60
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|425770129|gb|EKV08603.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
Pd1]
gi|425771678|gb|EKV10115.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
PHI26]
Length = 209
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L +CDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIGNVYGRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|320163034|gb|EFW39933.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 211
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE L+S+ GTEKD+ NC FYFK+GACRHG RCSRLH +PT SPT+LL N Y+ P
Sbjct: 1 MAEFLSSVHGTEKDKGNCSFYFKMGACRHGARCSRLHIKPTFSPTILLPNFYKSP--YPN 58
Query: 119 GVDAQGQPIDPRKI---QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQF 174
+ + PIDP + Q+HF++FYED+F E+ K+G +E +NVCDNL++H++GN YV+F
Sbjct: 59 PANPESGPIDPETMLASQDHFDEFYEDVFTEMEEKYGAVEEMNVCDNLSEHLVGNTYVKF 118
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
R EE A A L R++ GR + E S VTDF EA CRQ++ C GG+CNFMH+K I
Sbjct: 119 RREEDAERAAEDLNNRWFDGRVVSAELSTVTDFNEACCRQYDIGQCKFGGFCNFMHIKPI 178
Query: 235 GRDLRNKLFG 244
++LR +++G
Sbjct: 179 SKELRREIYG 188
>gi|345565480|gb|EGX48429.1| hypothetical protein AOL_s00080g58 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 142/215 (66%), Gaps = 15/215 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ E+ K+GEIE L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AFDPKNK-MNPNQLQTHFDGFYEDIWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKFEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH----VKLI 234
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQKACDELNQRWYAARPIYCELSPVTDFREACCRLNSGEGCQRGGFCNFIHRKEPTKEM 174
Query: 235 GRDLR--NKLFGRYR---RRSRSRSFSPIPHLRSR 264
RDL K + R R R +RS SP+ R+R
Sbjct: 175 DRDLELSTKKWLRIRGKDEREATRSPSPVFEGRTR 209
>gi|255941442|ref|XP_002561490.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586113|emb|CAP93860.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L +CDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIGNVYGRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
R+LR K R RS S SP P
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSP 202
>gi|395333024|gb|EJF65402.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 230
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CTKTE--------KELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L
Sbjct: 113 ETEAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASP 172
Query: 237 DLRNKL 242
+L L
Sbjct: 173 ELVRSL 178
>gi|346324452|gb|EGX94049.1| splicing factor U2AF 35 kDa subunit [Cordyceps militaris CM01]
Length = 211
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 136/208 (65%), Gaps = 11/208 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQK 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
V+ ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 61 NVNR----MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 116
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+ A L GR+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 117 ASQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDEL 176
Query: 239 RNKLFGRYRRRSRSR-------SFSPIP 259
L ++ RSR S SP P
Sbjct: 177 DRDLTLSTKKWLRSRGRDEKSVSRSPTP 204
>gi|400602483|gb|EJP70085.1| splicing factor U2AF 23 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 211
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 140/213 (65%), Gaps = 13/213 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQK 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 61 NTNR----MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 116
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A L GR+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 117 AAQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDEL 176
Query: 235 GRD--LRNKLFGRYRRR---SRSRSFSPIPHLR 262
RD L K + R R R S SRS +P P R
Sbjct: 177 DRDLTLSTKKWLRARGRDEKSVSRSPTPEPAKR 209
>gi|426378574|ref|XP_004055992.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like, partial
[Gorilla gorilla gorilla]
Length = 193
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 137/195 (70%), Gaps = 3/195 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+ ASIFGTEK VNC F FKIGAC HGDRCS LH++PT S T+ L N+Y P +
Sbjct: 1 MAEYPASIFGTEK--VNCSFDFKIGACLHGDRCSWLHHKPTFSQTIALLNIYCNPQNASQ 58
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F EL K+GE+E +NVCDNL DH++GNVY + E
Sbjct: 59 SADGLRCAVSDVEMQEHYDEFFEEVFIELGEKYGEVEEMNVCDNLGDHLVGNVYFKLPRE 118
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+PI E SPVTDFR A CRQ+E C RGG+CNFMH+K I R+
Sbjct: 119 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFRGACCRQYEMGECTRGGFCNFMHLKPISRE 178
Query: 238 LRNKLFGRYRRRSRS 252
LR +L G+ R++ RS
Sbjct: 179 LRRELCGQRRKKHRS 193
>gi|358377722|gb|EHK15405.1| hypothetical protein TRIVIDRAFT_74630 [Trichoderma virens Gv29-8]
Length = 209
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 139/210 (66%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A+AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS SRS +P P
Sbjct: 175 DRELTLSTKKWLKMRGRDERSVSRSPTPEP 204
>gi|322707016|gb|EFY98595.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 208
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 136/213 (63%), Gaps = 13/213 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A L R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 SAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 235 GRDL---RNKLFGRYRRRSRSRSFSPIPHLRSR 264
RDL K R RS S SP P R
Sbjct: 175 DRDLTLSTKKWLKLRGRDERSMSRSPTPEASKR 207
>gi|340924092|gb|EGS18995.1| putative splicing factor [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 209
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 143/214 (66%), Gaps = 12/214 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ +++Q HF+ FYEDI+ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AHDPKCR-MNEQQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
AA A L R+Y+ RP+ E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 DAAKACEDLNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 239 RNKL------FGRYRRRSRSRSFSPIPHLRSRHR 266
+L + + + RSRS + SP P R R+R
Sbjct: 175 ERELQLATKKWLKMKPRSRSPTRSPSPEPRRRYR 208
>gi|409080647|gb|EKM81007.1| hypothetical protein AGABI1DRAFT_71717 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197561|gb|EKV47488.1| hypothetical protein AGABI2DRAFT_221673 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 146/236 (61%), Gaps = 31/236 (13%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D I
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPI 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ + R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++
Sbjct: 113 ETEAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRNASP 172
Query: 237 DLRNKL-----------------FGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRR 275
DL +L G + R+RS SP SR RDG+ + R
Sbjct: 173 DLVKQLRHGQRLERKLHPPQHQGGGGWEPSKRNRSASPP----SRRGRDGEDRWSR 224
>gi|409044918|gb|EKM54399.1| hypothetical protein PHACADRAFT_174897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 226
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 129/186 (69%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A A+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L
Sbjct: 113 ETEAQTAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASP 172
Query: 237 DLRNKL 242
+L L
Sbjct: 173 ELVRSL 178
>gi|169613392|ref|XP_001800113.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
gi|111061972|gb|EAT83092.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
Length = 210
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P+++Q HF+ FYEDI+ EL ++G +E L VCDN DH+IGNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNPQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+ A AL R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 DSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 239 RNKLFGRYR-------RRSRSRSFSPIP 259
+L R R RS S SP P
Sbjct: 175 DRELDMCTRKWLKERGRDERSMSRSPTP 202
>gi|119188829|ref|XP_001245021.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867930|gb|EAS33646.2| splicing factor U2AF 35 kDa subunit [Coccidioides immitis RS]
Length = 209
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 141/214 (65%), Gaps = 17/214 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AFDPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 235 GRDLR------NKLFGRYRRRSRSRSFSPIPHLR 262
RDL KL GR RS SRS SP P R
Sbjct: 175 ERDLELSTKKWLKLRGR-DERSVSRSPSPEPSKR 207
>gi|351700683|gb|EHB03602.1| Splicing factor U2AF 35 kDa subunit [Heterocephalus glaber]
Length = 387
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
E+ VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D +
Sbjct: 172 EEMLVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSD 231
Query: 130 RKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQ 188
++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L
Sbjct: 232 VEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLN 291
Query: 189 GRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 292 NRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 346
>gi|453086343|gb|EMF14385.1| splicing factor U2AF 35 kDa subunit [Mycosphaerella populorum
SO2202]
Length = 209
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 144/216 (66%), Gaps = 16/216 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P+++Q HF+ FYED + E+ K+GEIE + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDNKSR-MNPQQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K G +L
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPGPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIPHLRSRH 265
+L ++ RS +RS SP P L+ R+
Sbjct: 175 ERELELATKKWLRERGRDERSVTRSASPEP-LKPRY 209
>gi|226470094|emb|CAX70328.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486850|emb|CAX74502.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486852|emb|CAX74503.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489605|emb|CAX74953.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489607|emb|CAX74954.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 221
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 131/188 (69%), Gaps = 5/188 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHG++CSRLHN+P+ T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEH---FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
D G I+ ++Q E F E E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SAD--GSHINLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFR 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A+ L R++ GRP+ E SPVTDFREA CRQ+E C RGG+CNFMH+K I
Sbjct: 119 REEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPIS 178
Query: 236 RDLRNKLF 243
R+L KL+
Sbjct: 179 RELCRKLY 186
>gi|256088283|ref|XP_002580274.1| U2 snRNP auxiliary factor small subunit [Schistosoma mansoni]
gi|108861853|gb|ABG21828.1| U2 snRNP auxiliary factor small subunit-like protein [Schistosoma
mansoni]
gi|360043806|emb|CCD81352.1| putative u2 snRNP auxiliary factor, small subunit [Schistosoma
mansoni]
Length = 221
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 131/188 (69%), Gaps = 5/188 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHG++CSRLHN+P+ T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEH---FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
D G I+ ++Q E F E E K+GEIE +NVCDNL DH++GNVY++FR
Sbjct: 61 SAD--GSHINLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFR 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
EE A A+ L R++ GRP+ E SPVTDFREA CRQ+E C RGG+CNFMH+K I
Sbjct: 119 REEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPIS 178
Query: 236 RDLRNKLF 243
R+L KL+
Sbjct: 179 RELCRKLY 186
>gi|171695120|ref|XP_001912484.1| hypothetical protein [Podospora anserina S mat+]
gi|170947802|emb|CAP59965.1| unnamed protein product [Podospora anserina S mat+]
Length = 208
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 138/207 (66%), Gaps = 12/207 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ E+ K+GEIE L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AFDPKNR-MNPSQLQNHFDAFYEDIWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 239 RNKL------FGRYRRRSRSRSFSPIP 259
+L + + R RSRS + SP P
Sbjct: 175 ERELELSTKKWLKTRPRSRSPTRSPSP 201
>gi|303323541|ref|XP_003071762.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111464|gb|EER29617.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035093|gb|EFW17035.1| splicing factor U2AF 35 kDa subunit [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 141/214 (65%), Gaps = 17/214 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AFDPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 SAQNACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 235 GRDLR------NKLFGRYRRRSRSRSFSPIPHLR 262
RDL KL GR RS SRS SP P R
Sbjct: 175 ERDLELSTKKWLKLRGR-DERSVSRSPSPEPSKR 207
>gi|395752868|ref|XP_002830790.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2, partial
[Pongo abelii]
Length = 323
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQ 133
VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P + D + ++Q
Sbjct: 99 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQ 158
Query: 134 EHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
EH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R++
Sbjct: 159 EHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWF 218
Query: 193 SGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
+G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 219 NGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 269
>gi|118399961|ref|XP_001032304.1| zinc finger protein [Tetrahymena thermophila]
gi|89286644|gb|EAR84641.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 389
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 176/295 (59%), Gaps = 39/295 (13%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE L+ ++GTE+D+VNCPFYFKIGACR+ ++C R+HNRP+ S T+L+ +MYQ + T
Sbjct: 60 MAEKLSRMYGTEEDKVNCPFYFKIGACRYENKCLRIHNRPSESQTILIKHMYQ--NSPTE 117
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
AQG + + Q+ H+E+FYE++F EL+ +GEI+ L +CDN+ DHM GNVYV++
Sbjct: 118 LALAQGNRVSEEEAQKALNHYEEFYEEVFLELASYGEIDDLIICDNIGDHMKGNVYVKYV 177
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E +A L +L+ R+Y + + EFSPVTDF A C+Q+ E C R GYCN++H K IG
Sbjct: 178 RESEALKCLMSLKTRYYDKQQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCNYIHSKPIG 237
Query: 236 RDLRNKLFGR-------YRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRT 288
R R LF + Y+ RSRSRS S + R+D +R ++ + S++
Sbjct: 238 RPFRRSLFRQMYEEHPEYKNRSRSRSRSDDDERSKKKRKDKERS------EKHEKDSKKK 291
Query: 289 HSRS---------------------STSSRSRTPVREGSEERRAKIEQWNREREE 322
HSRS S S+S +P + SEERRA I +W E +E
Sbjct: 292 HSRSRSSHKKHKKDKDKKKKKSRSHSKHSKSASPGYKNSEERRADIAKWGEEDDE 346
>gi|169846828|ref|XP_001830128.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116508898|gb|EAU91793.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 230
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 131/186 (70%), Gaps = 10/186 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP--DMI 116
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P D +
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPV 60
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY ++
Sbjct: 61 CK--------LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEW 112
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E +A AA+ + R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L
Sbjct: 113 ETEAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPSP 172
Query: 237 DLRNKL 242
+L +L
Sbjct: 173 ELLRQL 178
>gi|442763053|gb|JAA73685.1| Putative u2 snrnp splicing factor small subunit, partial [Ixodes
ricinus]
Length = 218
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 146/206 (70%), Gaps = 12/206 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LA I GTE+DRVNCPFY+KIGACRHGD+ SR H +P+ + TL++ +MYQ P +
Sbjct: 1 MAENLARIIGTEEDRVNCPFYWKIGACRHGDQGSRAHYKPSAAQTLVIRHMYQNPPVAI- 59
Query: 119 GVDAQGQPIDPR---KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ I K +HFE+F+E++F EL K+GEIE + VCDN+ DH+IGNVYV++R
Sbjct: 60 -AIAEGQMISDELLDKAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYR 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
+E A A+ L GRFY G+PI E++PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 DENSAGLAISMLSGRFYGGKPIQCEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKL-------FGRYRRRSRSRS 254
R +R KL + YRRRS RS
Sbjct: 179 RSVRRKLNERMYAEYPEYRRRSPRRS 204
>gi|340519983|gb|EGR50220.1| predicted protein [Trichoderma reesei QM6a]
Length = 209
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 140/213 (65%), Gaps = 15/213 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A+AA AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIPHLR 262
+L ++ RS+SRS +P P R
Sbjct: 175 DRELTLSTKKWLKMRGRDERSQSRSPTPEPSRR 207
>gi|322701010|gb|EFY92761.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium acridum
CQMa 102]
Length = 208
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 136/213 (63%), Gaps = 13/213 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A L R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 SAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 235 GRDL---RNKLFGRYRRRSRSRSFSPIPHLRSR 264
RDL K R RS S SP P R
Sbjct: 175 DRDLTLSTKKWLKLRGRDERSMSRSPTPEASKR 207
>gi|444511515|gb|ELV09911.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 218
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE LASIF TEKD+VNC YFK+GACRHGDRCS LHN+PT S T++L N+Y+ +P
Sbjct: 1 MAESLASIFSTEKDKVNCSSYFKLGACRHGDRCSGLHNKPTFSQTIVLLNIYRNLHNSSP 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+ ++Q+H+++F++++F E+ K+GE+E +NVCDN DH+ GNVYV+FR E
Sbjct: 61 SAGGLHGAVSDAEMQQHYDEFFKEVFTEMEEKYGEVEEMNVCDNAGDHLAGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++ +PI E SPVTDFREA CRQ+E C +GG+CN MH+K I R+
Sbjct: 121 EDAEKAVMDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTQGGFCNLMHLKPISRE 180
Query: 238 L 238
L
Sbjct: 181 L 181
>gi|330940524|ref|XP_003305953.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
gi|311316782|gb|EFQ85946.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
Length = 214
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 139/209 (66%), Gaps = 13/209 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ +++Q HF+ FYEDI+ EL ++G +E L VCDN DH+IGNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 239 RNKLFGRYR-------RRSRSRSFSPIPH 260
+L R R +RS S SP P
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTPQ 203
>gi|189209401|ref|XP_001941033.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977126|gb|EDU43752.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 214
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 139/209 (66%), Gaps = 13/209 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ +++Q HF+ FYEDI+ EL ++G +E L VCDN DH+IGNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 239 RNKLFGRYR-------RRSRSRSFSPIPH 260
+L R R +RS S SP P
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTPQ 203
>gi|451850761|gb|EMD64062.1| hypothetical protein COCSADRAFT_199489 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ +++Q HF+ FYEDI+ EL ++G +E L VCDN DH+IGNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 239 RNKLFGRYR-------RRSRSRSFSPIP 259
+L R R +RS S SP P
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|452983858|gb|EME83616.1| hypothetical protein MYCFIDRAFT_85447 [Pseudocercospora fijiensis
CIRAD86]
Length = 209
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 139/210 (66%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P+++Q HF+ FYED + E+ KFGEIE + VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDNKSR-MNPQQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS +RS SP P
Sbjct: 175 ERELELATKKWLRERGRDPRSVTRSPSPEP 204
>gi|358059521|dbj|GAA94678.1| hypothetical protein E5Q_01331 [Mixia osmundae IAM 14324]
Length = 260
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 130/173 (75%), Gaps = 5/173 (2%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
A HLA+I+G+E+D+VNC FY KIGACRHGDRCSR H +P S T+++ NMYQ P+ G
Sbjct: 17 ASHLAAIYGSEQDKVNCSFYLKIGACRHGDRCSRKHIKPHFSQTIVIQNMYQNPNH---G 73
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
+DA + +D ++Q+ F+ F+ED++ EL KFG + ++VCDN+ DH+IGNVY ++ E++
Sbjct: 74 MDAGAKSVD--QLQDEFDQFFEDVYCELVKFGHLLEMHVCDNVGDHLIGNVYARYDFEDE 131
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
A A+ L R+++GRP+ E SPVTDFREATCRQ + NC+RGG+CNF H++
Sbjct: 132 AQTAIDTLNTRWFAGRPLFAELSPVTDFREATCRQNDLGNCDRGGFCNFHHLR 184
>gi|429851228|gb|ELA26437.1| u2 auxiliary factor small [Colletotrichum gloeosporioides Nara gc5]
Length = 208
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 135/214 (63%), Gaps = 13/214 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K DL
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDL 174
Query: 239 RNKLFGRYR-------RRSRSRSFSPIPHLRSRH 265
L + R RS S SP P RH
Sbjct: 175 DRDLTLSTKKWLKDRGRDERSPSRSPTPEPTRRH 208
>gi|46124965|ref|XP_387036.1| hypothetical protein FG06860.1 [Gibberella zeae PH-1]
gi|408388308|gb|EKJ67994.1| hypothetical protein FPSE_11805 [Fusarium pseudograminearum CS3096]
Length = 209
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 135/208 (64%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 235 GRDL---RNKLFGRYRRRSRSRSFSPIP 259
RDL K + R RS S SP P
Sbjct: 175 DRDLTLSTKKWLKQRGRDERSASRSPTP 202
>gi|451995958|gb|EMD88425.1| hypothetical protein COCHEDRAFT_1205672 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 139/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ +++Q HF+ FYEDI+ EL ++G +E L VCDN DH+IGNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 239 RNKLFGRYR-------RRSRSRSFSPIP 259
+L R R +RS S SP P
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|296810970|ref|XP_002845823.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843211|gb|EEQ32873.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 209
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 139/210 (66%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQY--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D++ + ++P ++Q HF+ FYED + E+ K+GEIE + VC+N DH+IGNVY +F+ E+
Sbjct: 58 --DSKNK-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR-- 236
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEL 174
Query: 237 ----DLRNKLFGRYR---RRSRSRSFSPIP 259
DL K + R R RS +RS SP P
Sbjct: 175 DRELDLSTKKWLRLRGRDERSMTRSPSPEP 204
>gi|367052051|ref|XP_003656404.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
gi|347003669|gb|AEO70068.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
Length = 231
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 138/207 (66%), Gaps = 12/207 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 24 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 78
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYEDI+ E+ K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 79 AFDPKNR-MNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYED 137
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 138 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 197
Query: 239 RNKL------FGRYRRRSRSRSFSPIP 259
+L + + + RSRS + SP P
Sbjct: 198 ERELQLATKKWLKMKPRSRSPTRSPSP 224
>gi|116182458|ref|XP_001221078.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186154|gb|EAQ93622.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 208
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 138/207 (66%), Gaps = 12/207 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYEDI+ E+ K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AFDPKNR-MNASQLQNHFDAFYEDIWCEMCKYGEVEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K G +L
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPGPEL 174
Query: 239 RNKL------FGRYRRRSRSRSFSPIP 259
+L + + R RSRS + SP P
Sbjct: 175 DRELELSTKKWLKTRPRSRSPTRSPSP 201
>gi|396460408|ref|XP_003834816.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
gi|312211366|emb|CBX91451.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
Length = 207
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 138/208 (66%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ +++Q HF+ FYEDI+ EL +FG +E L VCDN DH+IGNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQFGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+ A AL R+Y+GRPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 DSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 239 RNKLFGRYR-------RRSRSRSFSPIP 259
+L R R RS S SP P
Sbjct: 175 ERELDMCTRKWLKERGRDPRSMSRSPTP 202
>gi|342890175|gb|EGU89039.1| hypothetical protein FOXB_00451 [Fusarium oxysporum Fo5176]
Length = 209
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 134/208 (64%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 235 GRDL---RNKLFGRYRRRSRSRSFSPIP 259
RDL K R +S S SP P
Sbjct: 175 DRDLTLSTKKWLKERGRDEKSASRSPTP 202
>gi|389624797|ref|XP_003710052.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|351649581|gb|EHA57440.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|440473536|gb|ELQ42326.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae Y34]
gi|440483649|gb|ELQ63999.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae P131]
Length = 209
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 136/213 (63%), Gaps = 15/213 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H +PT S T+L+ NMYQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + ++ ++Q HF+ FYED++ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNN-MNASQLQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCTRGGFCNFIHRKNPSEEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIPHLR 262
+L ++ RS SRS +P P R
Sbjct: 175 DRELVLATKKWLKMRGRDERSVSRSPTPEPSRR 207
>gi|310790801|gb|EFQ26334.1| hypothetical protein GLRG_01478 [Glomerella graminicola M1.001]
Length = 209
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 135/210 (64%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K DL
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
L ++ RS SRS +P P
Sbjct: 175 DRDLTLSTKKWLKERGRDERSPSRSPTPEP 204
>gi|302414438|ref|XP_003005051.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261356120|gb|EEY18548.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|346979310|gb|EGY22762.1| splicing factor U2AF 23 kDa subunit [Verticillium dahliae VdLs.17]
Length = 210
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 137/210 (65%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL ++GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCQYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDALNSRWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS SRS +P P
Sbjct: 175 DRELVLSTKKWLKDRGRDERSPSRSPTPEP 204
>gi|380493273|emb|CCF34000.1| hypothetical protein CH063_06082 [Colletotrichum higginsianum]
Length = 209
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 135/210 (64%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K DL
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
L ++ RS SRS +P P
Sbjct: 175 DRDLTLSTKKWLKDRGRDERSPSRSPTPEP 204
>gi|261196914|ref|XP_002624860.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|225562652|gb|EEH10931.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
gi|239596105|gb|EEQ78686.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609690|gb|EEQ86677.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ER-3]
gi|240279459|gb|EER42964.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H143]
gi|325092588|gb|EGC45898.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H88]
gi|327355349|gb|EGE84206.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 209
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 138/210 (65%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDTKNK-MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS +RS SP P
Sbjct: 175 ERELELSTKKWLKMRGRDERSVTRSPSPEP 204
>gi|213401493|ref|XP_002171519.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|211999566|gb|EEB05226.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 129/190 (67%), Gaps = 5/190 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+I+GTE+D+VNC FY+KIGACRHG+RCSR H +P S T+L N+Y+ P
Sbjct: 1 MASHLANIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNYSQTVLCPNLYKNPIH--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ G+ + ++ E F+ FYED+F E +K+GE+E + VCDN+ DH+IGNVYV+F+ EE
Sbjct: 58 --EDSGKHMSQAELDEQFDAFYEDMFCEFAKYGEVEQIVVCDNIGDHLIGNVYVRFKYEE 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A+ L R+YS +P+ E SPVTDFREA CRQ E + C RGG CNFMH K L
Sbjct: 116 SAQNAIDDLNSRWYSQKPVYAELSPVTDFREACCRQHETSECGRGGLCNFMHAKKPSPHL 175
Query: 239 RNKLFGRYRR 248
+L R+
Sbjct: 176 IRELMAAQRK 185
>gi|392578781|gb|EIW71908.1| hypothetical protein TREMEDRAFT_58042 [Tremella mesenterica DSM
1558]
Length = 228
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 131/184 (71%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H +P S T+LL N+Y P TP
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSSTILLPNVYNNPAH-TP 59
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+GQ + P ++Q++F++FYED F EL K+G ++ ++VCDN+ DH++GNVY ++ E
Sbjct: 60 ----EGQNMTPEQLQQNFDNFYEDFFIELCKYGNLQEMHVCDNVGDHLMGNVYARYEYET 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+A+ A AL ++Y+ +P++ E SPV+DFREA CRQ E C R G+CNFMH+ + L
Sbjct: 116 EASKACDALNDKWYAMKPLMAELSPVSDFREACCRQNEMGECVREGFCNFMHLCHPSKSL 175
Query: 239 RNKL 242
+ L
Sbjct: 176 VSSL 179
>gi|358391429|gb|EHK40833.1| hypothetical protein TRIATDRAFT_301601 [Trichoderma atroviride IMI
206040]
Length = 209
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 136/210 (64%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNR-MNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AA L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQAAADTLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS SRS +P P
Sbjct: 175 DRELTLSTKKWLKSRGRDERSASRSPTPEP 204
>gi|324522962|gb|ADY48164.1| Splicing factor U2AF 26 kDa subunit, partial [Ascaris suum]
Length = 303
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 127/189 (67%), Gaps = 8/189 (4%)
Query: 64 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQ 123
+S+F EKDRVNC FYFKIGACRHGD+CSRLH RPT S T+LL N Y+ G
Sbjct: 10 SSLFTPEKDRVNCSFYFKIGACRHGDKCSRLHIRPTYSQTILLKNFYR-------GAGIH 62
Query: 124 GQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ Q F++FY ++F E+ ++G IE +NVCDN+ +HM+GNVYV+FR E A
Sbjct: 63 SSDTSKEEAQREFDEFYREVFVEIDDEYGRIEEMNVCDNVGEHMLGNVYVKFRHESSAER 122
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
A+++L R++ GRPI E SPV DFR+A CRQ+E CNRGG+CNFMH+K + L+ KL
Sbjct: 123 AVNSLNERWFDGRPIHCELSPVVDFRDACCRQYEIGECNRGGFCNFMHLKKVSSGLKRKL 182
Query: 243 FGRYRRRSR 251
R R+ R
Sbjct: 183 LRRSERQKR 191
>gi|397625258|gb|EJK67720.1| hypothetical protein THAOC_11212 [Thalassiosira oceanica]
Length = 188
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 123/172 (71%), Gaps = 6/172 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP----- 113
MA HLA I GTE+DRVNCPFYFKIGACRHGDRCSR H++P S T+L+ ++Y+ P
Sbjct: 1 MACHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRHHHKPAFSQTVLIKHIYRHPIREAE 60
Query: 114 -DMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYV 172
+ G ID K +E F FYED +EELSKFG IE L++CDNL DHM+G+ Y
Sbjct: 61 LNAARMGQSVDVIQIDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYC 120
Query: 173 QFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG 224
+F EEE+AA AL+ + GR+Y GR + VEFSPV DFREA CR F+E++C RGG
Sbjct: 121 KFSEEEEAADALNVMNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGG 172
>gi|154279620|ref|XP_001540623.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150412566|gb|EDN07953.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 270
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 138/211 (65%), Gaps = 15/211 (7%)
Query: 58 AMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMIT 117
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ
Sbjct: 61 TMANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----N 115
Query: 118 PGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
P D + + ++P ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E
Sbjct: 116 PAYDTKNK-MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYE 174
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
+ A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 175 DSAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPE 234
Query: 238 LRNKLFGRYRR---------RSRSRSFSPIP 259
L +L ++ RS +RS SP P
Sbjct: 235 LERELELSTKKWLKMRGRDERSVTRSPSPEP 265
>gi|452845011|gb|EME46945.1| hypothetical protein DOTSEDRAFT_70773 [Dothistroma septosporum
NZE10]
Length = 209
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 138/210 (65%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED + E+ K+GEIE + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDNKSR-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS +RS SP P
Sbjct: 175 DRELELATKKWLRERGRDDRSVTRSPSPEP 204
>gi|76156406|gb|AAX27612.2| SJCHGC07381 protein [Schistosoma japonicum]
Length = 219
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 61 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV 120
E+LASIFGTEKD+VNC FYFKIGACRHG++CSRLHN+P+ T+LL N+Y P
Sbjct: 1 EYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSA 60
Query: 121 DAQGQPIDPRKIQEH---FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
D G I+ ++Q E F E E K+GEIE +NVCDNL DH++GNVY++FR E
Sbjct: 61 D--GSHINLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRRE 118
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R++ GRP+ E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+
Sbjct: 119 EDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRE 178
Query: 238 LRNKLF 243
L KL+
Sbjct: 179 LCRKLY 184
>gi|295661444|ref|XP_002791277.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280839|gb|EEH36405.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292865|gb|EEH48285.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 209
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 140/216 (64%), Gaps = 16/216 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDTKNK-MNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIPHLRSRH 265
+L ++ RS +RS SP P R RH
Sbjct: 175 EKELELSTKKWLKMRGRDERSVTRSPSPEP-TRKRH 209
>gi|315051764|ref|XP_003175256.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|327296385|ref|XP_003232887.1| splicing factor U2AF subunit [Trichophyton rubrum CBS 118892]
gi|311340571|gb|EFQ99773.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|326465198|gb|EGD90651.1| splicing factor U2AF 35 kDa subunit [Trichophyton rubrum CBS
118892]
gi|326473197|gb|EGD97206.1| splicing factor U2AF 35 kDa subunit [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 139/210 (66%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQY--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED + E+ K+GEIE + VC+N DH+IGNVY +F+ E+
Sbjct: 58 --DPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEL 174
Query: 239 RNKL------FGRYR---RRSRSRSFSPIP 259
+L + R R RS +RS SP P
Sbjct: 175 DRELELSTKKWLRLRGRDERSVTRSPSPEP 204
>gi|403169415|ref|XP_003328862.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167949|gb|EFP84443.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 278
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 126/174 (72%), Gaps = 6/174 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HL++I+G+E+D+VNC FY KIGACRHG+RCSR H +PT S TL+++NMYQ P
Sbjct: 1 MASHLSNIYGSEQDKVNCSFYLKIGACRHGERCSRKHIKPTFSQTLVIANMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ +FE FYED+F EL K+G + ++VCDN+ DH+IGNVY ++ E+
Sbjct: 56 AHDPNCK-LSEAELTSYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYDWED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
+A A+ A R+Y+GRP+ E SPVTDFREA CRQ + CNRGG+CNFMH+K
Sbjct: 115 EAQIAVDAFNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLK 168
>gi|406862517|gb|EKD15567.1| splicing factor U2AF 35 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 209
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 136/210 (64%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEADKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYED + E+ KFGEIE + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR-- 236
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K
Sbjct: 115 SAQKASDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 237 ----DLRNKLFGRYR---RRSRSRSFSPIP 259
+L K + R R RS SRS SP P
Sbjct: 175 DREIELSTKKWLRLRGRDERSASRSPSPEP 204
>gi|312088442|ref|XP_003145864.1| hypothetical protein LOAG_10291 [Loa loa]
gi|307758974|gb|EFO18208.1| hypothetical protein LOAG_10291 [Loa loa]
Length = 252
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116
++ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H P+ S T+LL N+Y P +
Sbjct: 6 MSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMID 65
Query: 117 TPGVDAQGQ--PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
T DA + ++ ++ Q E F E E KFG I+ +NVCDN+ +HMIGNVYV+F
Sbjct: 66 TRQADAFAKVGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKF 125
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
EE A + L+ R+++G P+ E SPVTDFREA CRQ+E CN+G +CNFMH+K I
Sbjct: 126 ENEEDADKCVKGLENRWFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQI 185
Query: 235 GRDLRNKLFG 244
RDLR KL+G
Sbjct: 186 SRDLRRKLYG 195
>gi|170596198|ref|XP_001902678.1| splicing factor U2AF35 [Brugia malayi]
gi|158589514|gb|EDP28475.1| splicing factor U2AF35, putative [Brugia malayi]
Length = 247
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116
++ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H P+ S T+LL N+Y P +
Sbjct: 6 MSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMID 65
Query: 117 TPGVDAQGQ--PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
T DA + ++ ++ Q E F E E KFG I+ +NVCDN+ +HMIGNVYV+F
Sbjct: 66 TRQADAFAKVGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKF 125
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
EE A + L+ R+++G P+ E SPVTDFREA CRQ+E CN+G +CNFMH+K I
Sbjct: 126 ENEEDADKCVKGLENRWFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQI 185
Query: 235 GRDLRNKLFG 244
RDLR KL+G
Sbjct: 186 SRDLRRKLYG 195
>gi|154301115|ref|XP_001550971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|156056997|ref|XP_001594422.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154702015|gb|EDO01754.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|347840346|emb|CCD54918.1| similar to splicing factor U2af 38 kDa subunit [Botryotinia
fuckeliana]
Length = 210
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 137/210 (65%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEADKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYED + E+ KFGEIE + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDEL 174
Query: 239 RNKL------FGRYR---RRSRSRSFSPIP 259
+L + R R RS +RS SP P
Sbjct: 175 DRELELSTKKWLRMRGRDERSVTRSPSPEP 204
>gi|312381446|gb|EFR27193.1| hypothetical protein AND_06248 [Anopheles darlingi]
Length = 372
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPIDPR 130
RVNC FYFKIGACRHGDRCSR+HN+PT S T LL N+Y P D +
Sbjct: 132 RVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDE 191
Query: 131 KIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
++QEH+++F+ED+F E K+GEIE +NVCDNL DH++GNVY++FR EE A A L
Sbjct: 192 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNN 251
Query: 190 RFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
R++ GRP+ E SPVTDFREA CRQ+E C R G+CNFMH+K I R+
Sbjct: 252 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 299
>gi|405122366|gb|AFR97133.1| splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 223
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 126/184 (68%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYN-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G +GQ + ++Q F+ FYED F EL+K+G ++ + VCDN+ DH++GNVY +F E
Sbjct: 56 GHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEA 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+AA A+ AL R+Y+ RP+ E SPVTDFRE+ CRQ E C R G+CNFMH+ R L
Sbjct: 116 EAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSL 175
Query: 239 RNKL 242
+ L
Sbjct: 176 VSAL 179
>gi|58271046|ref|XP_572679.1| splicing factor [Cryptococcus neoformans var. neoformans JEC21]
gi|134114768|ref|XP_773682.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256310|gb|EAL19035.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228938|gb|AAW45372.1| splicing factor, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 223
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 126/184 (68%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYN-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G +GQ + ++Q F+ FYED F EL+K+G ++ + VCDN+ DH++GNVY +F E
Sbjct: 56 GHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEA 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+AA A+ AL R+Y+ RP+ E SPVTDFRE+ CRQ E C R G+CNFMH+ R L
Sbjct: 116 EAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSL 175
Query: 239 RNKL 242
+ L
Sbjct: 176 VSAL 179
>gi|402586021|gb|EJW79960.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Wuchereria
bancrofti]
Length = 215
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116
++ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H P+ S T+LL N+Y P +
Sbjct: 6 MSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMID 65
Query: 117 TPGVDAQGQ--PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
T DA + ++ ++ Q E F E E KFG I+ +NVCDN+ +HMIGNVYV+F
Sbjct: 66 TRQADAFAKVGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKF 125
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
EE A + L+ R+++G P+ E SPVTDFREA CRQ+E CN+G +CNFMH+K I
Sbjct: 126 ENEEDADKCVKGLENRWFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQI 185
Query: 235 GRDLRNKLFG 244
RDLR KL+G
Sbjct: 186 SRDLRRKLYG 195
>gi|388580357|gb|EIM20672.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 216
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 127/179 (70%), Gaps = 6/179 (3%)
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
A LASIFGTE+DRVNC FY+KIGACRHG+RCSR H +P S T+++ N+YQ P M P
Sbjct: 3 ASRLASIFGTEQDRVNCSFYYKIGACRHGERCSRKHIKPQFSQTIVMPNVYQNP-MHRPD 61
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
+D R IQ F+ F+ED+F EL KFG + ++VCDN+ DH+IGNVY ++ E +
Sbjct: 62 -----NKLDQRGIQVDFDMFFEDLFMELCKFGNLLEMHVCDNVGDHLIGNVYARYEWETE 116
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AA+ L R+Y+GRP+ E SPVTDFREA CRQ + +CNRGG+CNFMH+K R L
Sbjct: 117 AQAAVDKLNERWYAGRPLHCELSPVTDFREACCRQNDTGDCNRGGFCNFMHLKRPTRSL 175
>gi|302915833|ref|XP_003051727.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732666|gb|EEU46014.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 209
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 135/208 (64%), Gaps = 13/208 (6%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H +P+ S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYEDI+ EL K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKNR-MNQSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
RDL+ K + R +S S SP P
Sbjct: 175 DRDLQLSTKKWLKQRGRDEKSVSRSPTP 202
>gi|198430519|ref|XP_002128159.1| PREDICTED: zinc finger (C-x8-C-x5-C-x3-H)-16 [Ciona intestinalis]
Length = 187
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 143/222 (64%), Gaps = 37/222 (16%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLHN+PT S T+ N ++ +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIHYDNFFEEVFV--- 57
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
E K+G IE +NVCDNL DH++GNVY++F +EE
Sbjct: 58 --------------------------ELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKEE 91
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A++ L R+++G+PI+ E S VTDFREA CRQ+E C RGG+CNFMH+K I R+L
Sbjct: 92 DAEKAVNDLNNRWFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 151
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDR 280
R +L+GR ++ RSRS P +R+RR G R+ R RDR
Sbjct: 152 RRRLYGRKEKKKRSRS-PP-----TRNRRGGSRE--RHGRDR 185
>gi|321262008|ref|XP_003195723.1| U2 snRNP auxiliary factor small subunit [Cryptococcus gattii WM276]
gi|317462197|gb|ADV23936.1| U2 snRNP auxiliary factor small subunit, putative [Cryptococcus
gattii WM276]
Length = 223
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 126/184 (68%), Gaps = 5/184 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYN-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G +GQ + ++Q F+ FYED F EL+K+G ++ + VCDN+ DH++GNVY +F E
Sbjct: 56 GHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEA 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+AA A+ AL R+Y+ RP+ E SPVTDFRE+ CRQ E C R G+CNFMH+ R L
Sbjct: 116 EAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSL 175
Query: 239 RNKL 242
+ L
Sbjct: 176 VSAL 179
>gi|440635086|gb|ELR05005.1| splicing factor U2AF 35 kDa subunit [Geomyces destructans 20631-21]
Length = 209
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 137/210 (65%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + +D +++Q HF+ FYED + E+ K+GE+E + +CDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKAK-LDAKQLQMHFDAFYEDFWCEMCKYGELEEVVICDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C R G+CNF+H K +L
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRAGFCNFIHRKNPSPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L R+ RS +RS SP P
Sbjct: 175 ERELDMSTRKWLRERGRDERSVTRSPSPEP 204
>gi|238586680|ref|XP_002391246.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
gi|215455659|gb|EEB92176.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
Length = 249
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 130/191 (68%), Gaps = 15/191 (7%)
Query: 59 MAEHLASI-----FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
MA HLASI FGTE+DRVNC FY+KIGA RHGDRCSR H RP S T+LL N+Y P
Sbjct: 1 MASHLASIVSANIFGTEQDRVNCSFYYKIGAWRHGDRCSRKHIRPPFSQTILLPNVYHNP 60
Query: 114 --DMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVY 171
D + + +++QE F+ YED++ EL+KFG + L+VCDN+ DH+IGNVY
Sbjct: 61 AHDPVCK--------LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVY 112
Query: 172 VQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
++ E +A A+ L R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH+
Sbjct: 113 ARYEWETEAQTAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHL 172
Query: 232 KLIGRDLRNKL 242
+L ++L + L
Sbjct: 173 RLASKELVDSL 183
>gi|378729857|gb|EHY56316.1| hypothetical protein HMPREF1120_04400 [Exophiala dermatitidis
NIH/UT8656]
Length = 209
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 137/210 (65%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS SRS SP P
Sbjct: 175 ERELELSTKKWLKMRGRDERSVSRSPSPEP 204
>gi|398408734|ref|XP_003855832.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
gi|339475717|gb|EGP90808.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
Length = 209
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 136/210 (64%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + + P ++Q HF+ FY+D + E+ KFGE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDNKSR-MTPSQLQNHFDAFYDDFWCEMCKFGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K DL
Sbjct: 115 AAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPDL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS +RS SP P
Sbjct: 175 EKELELATKKHLRIRGRDERSVTRSPSPEP 204
>gi|70952191|ref|XP_745280.1| U2 snRNP auxiliary factor, small subunit [Plasmodium chabaudi
chabaudi]
gi|56525554|emb|CAH89145.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 299
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 166/276 (60%), Gaps = 15/276 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H +P + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAV- 59
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A+GQ +D + + HFE+FYE++F+EL K + VCDN + +
Sbjct: 60 -AIAEGQMVDDEVLDQAADHFEEFYEEVFDELMKXEIEDXGXVCDNGDHXYWKCLXLNIH 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E+ A A+ L GRFY+G+P+ +E++PVTDFREA CRQF + C RGGYCNFMH+K +
Sbjct: 119 XEDYAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 236 RDLRNKL-------FGRYR--RRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSR 286
R ++ +L F Y+ R+SR S H R R R D+ R RS+
Sbjct: 179 RTVKRRLHKRMYKKFPMYKKNRKSRDDSDGERRHDRYRDRSRRDKYGSSYNSSRRRHRSQ 238
Query: 287 RTHSRSSTSSRS-RTPVREGSEERRAKIEQWNRERE 321
++ + RS + P RE S ERR KIE+WN+ERE
Sbjct: 239 SSNGNDDDNERSHKHPRRENSSERREKIERWNKERE 274
>gi|225680499|gb|EEH18783.1| splicing factor U2af 38 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 209
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 139/216 (64%), Gaps = 16/216 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDTKNK-MNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQQGCDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIPHLRSRH 265
+L ++ RS +RS SP P R RH
Sbjct: 175 EKELELSTKKWLKMRGRDERSVTRSPSPEP-TRKRH 209
>gi|149056307|gb|EDM07738.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_c
[Rattus norvegicus]
Length = 188
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
D + ++QEH+++F+E++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFE 216
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYE 159
>gi|85112805|ref|XP_964414.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336267438|ref|XP_003348485.1| hypothetical protein SMAC_02979 [Sordaria macrospora k-hell]
gi|28926195|gb|EAA35178.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336464311|gb|EGO52551.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2508]
gi|350296398|gb|EGZ77375.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2509]
gi|380092140|emb|CCC10408.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 208
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 136/207 (65%), Gaps = 12/207 (5%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ N+Y P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYH-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYEDI+ E+ K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AFDPKNR-MNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 239 RNKL------FGRYRRRSRSRSFSPIP 259
+L + + R RSRS + SP P
Sbjct: 175 ERELELSTKKWLKMRPRSRSPTRSPSP 201
>gi|407919834|gb|EKG13056.1| Inositol monophosphatase [Macrophomina phaseolina MS6]
Length = 209
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 137/210 (65%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K+ +L
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKVPSPEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS SRS SP P
Sbjct: 175 ERELELSTKKWLKMRGRDERSVSRSPSPEP 204
>gi|328861623|gb|EGG10726.1| hypothetical protein MELLADRAFT_42160 [Melampsora larici-populina
98AG31]
Length = 244
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 123/174 (70%), Gaps = 6/174 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HL++I+G+E+D+VNC FY KIGACRHG+RCSR H +PT S T +++NMYQ P
Sbjct: 1 MASHLSNIYGSEQDKVNCSFYLKIGACRHGERCSRKHIKPTFSQTFVIANMYQNP----- 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ ++ +FE FYED+F EL K+G + ++VCDN+ DH+IGNVY ++ E+
Sbjct: 56 -AHDPNCKLSEAELASYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYEWED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
+A A+ A R+Y+GRP+ E SPVTDFREA CRQ + CNRGG+CNFMH+K
Sbjct: 115 EAQIAVDAFNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLK 168
>gi|324505367|gb|ADY42309.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 275
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 128/191 (67%), Gaps = 4/191 (2%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116
++ AE+LASI+GTEKD+VNC FYFKIGACRHG++CSR H P+ S T+LL N+Y P +
Sbjct: 7 MSGAEYLASIYGTEKDKVNCSFYFKIGACRHGEKCSRTHIMPSFSQTVLLKNLYHNPLID 66
Query: 117 TPGVDA---QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQ 173
T DA GQ D + E E KFG I+ +NVCDN+ +HMIGNVYV+
Sbjct: 67 TRQADAFAKAGQQNDQEQQYFEEFFE-ELFVELEDKFGPIDEMNVCDNIGEHMIGNVYVK 125
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKL 233
F EE A + L R+++G PI E SPVTDFREA CRQ+E CN+G +CNFMH+K
Sbjct: 126 FENEEDADKCVKGLDDRWFNGCPIYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQ 185
Query: 234 IGRDLRNKLFG 244
I RDLR KL+G
Sbjct: 186 ISRDLRRKLYG 196
>gi|402074537|gb|EJT70046.1| splicing factor U2AF 23 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 209
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 134/210 (63%), Gaps = 15/210 (7%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H +PT S T+L+ NMYQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++ + Q HF+ FYED++ EL K+GE+E L VCDN DH+IGNVY +F+ E+
Sbjct: 56 AHDPKNR-MNESQAQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A L R+Y+ RPI E SPVTDFREA CR C R G+CNF+H K +L
Sbjct: 115 SAQKACDELNNRWYAARPIYCELSPVTDFREACCRLNSGEGCARAGFCNFIHRKNPSEEL 174
Query: 239 RNKLFGRYRR---------RSRSRSFSPIP 259
+L ++ RS SRS SP P
Sbjct: 175 DRELQLSTKKWLKMRGRDERSVSRSPSPEP 204
>gi|390478906|ref|XP_003735604.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Callithrix jacchus]
Length = 283
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 135/196 (68%), Gaps = 4/196 (2%)
Query: 51 KFAGRGLA-MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNM 109
+ GRG AE+LASIFGTEKD+VNC FYFKIGACRHGD+ SRLHN+PT + T++L N+
Sbjct: 52 RLEGRGSGKTAEYLASIFGTEKDKVNCSFYFKIGACRHGDQYSRLHNKPTFTQTVVLLNL 111
Query: 110 YQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIG 168
Y+ P D + ++QEH++ F E++F EL K+GEIE +NV DNL DH++G
Sbjct: 112 YRNPQNTAQIADGSHCHVSDVEVQEHYDSF-EEVFTELQEKYGEIEEMNVXDNLGDHLVG 170
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
NVYV+FR EE A A+ L F +G+ + E S VTDFRE+ C Q+E C RGG+CNF
Sbjct: 171 NVYVKFRREEDAERAVAELNNXF-NGQAVHAELSHVTDFRESCCCQYEMGECTRGGFCNF 229
Query: 229 MHVKLIGRDLRNKLFG 244
MH++ I ++LR + G
Sbjct: 230 MHLRPISQNLRPRSMG 245
>gi|164660716|ref|XP_001731481.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
gi|159105381|gb|EDP44267.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
Length = 258
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 124/187 (66%), Gaps = 5/187 (2%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
+GTE+D+VNC FYFKIGACRHGDRCSR H RP S T+LLSN+YQ P + P A
Sbjct: 8 YGTEQDKVNCSFYFKIGACRHGDRCSRRHIRPERSHTILLSNVYQNPKYLDPDCRASDA- 66
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
++Q+ F+ F+ D F+ LS +G + ++VCDN+ DH+IGNVY ++ E+ A A+
Sbjct: 67 ----ELQQQFDAFFSDFFKGLSDYGTLIEMHVCDNVGDHLIGNVYARYETEDDAQRAVDG 122
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRY 246
L R+Y RP+ E SPV+DFREA CRQ E N CNRGG CNFMH++ +L +L+ +
Sbjct: 123 LNTRWYHQRPLFAELSPVSDFREACCRQNETNECNRGGQCNFMHLRYASPELVRELYQQL 182
Query: 247 RRRSRSR 253
+R R
Sbjct: 183 AVENRER 189
>gi|443916710|gb|ELU37680.1| splicing factor U2AF 26 kDa subunit [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 121/174 (69%), Gaps = 6/174 (3%)
Query: 69 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPID 128
++DRVNC FY+KIGACRHGDRCSR H RP S T+LL N+Y P ++ Q
Sbjct: 297 VQQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHNPSATYSEDQ--- 353
Query: 129 PRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQ 188
+Q+ F+ YED++ EL+K+G + L+VCDN+ DH+IGNVY ++ E +A AA+ AL
Sbjct: 354 ---LQQDFDTTYEDLYCELAKYGNLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDALN 410
Query: 189 GRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
R+Y+GRP+ E SPVTDFREA CRQ E CNRGG+CNFMH++L + L ++L
Sbjct: 411 NRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKKLVSEL 464
>gi|50555327|ref|XP_505072.1| YALI0F06292p [Yarrowia lipolytica]
gi|49650942|emb|CAG77879.1| YALI0F06292p [Yarrowia lipolytica CLIB122]
Length = 203
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 129/203 (63%), Gaps = 8/203 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP-DMIT 117
MA HLASI+GTE D+VNC FY+KIGACRHG++CSR H +PT S T+L SN+YQ P + +
Sbjct: 1 MASHLASIYGTENDKVNCSFYYKIGACRHGEKCSRKHVKPTYSNTVLCSNLYQNPANGES 60
Query: 118 PGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
++ G + + +HF FYEDI+ E +K G +E + VC+N DH+ GN Y++FR +
Sbjct: 61 DPLNEDGSKMTKADLDKHFALFYEDIYMEAAKLGRLEEMIVCENGNDHLTGNTYLRFRNQ 120
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----L 233
E A A R+Y+GRP+ E SPV DF E+ CRQ + N C+RG CNFMH K
Sbjct: 121 EDAQRACDLFNTRWYAGRPVWCELSPVNDFTESCCRQHDTNECSRGNMCNFMHAKRPPRQ 180
Query: 234 IGRDL---RNKLFGRYRRRSRSR 253
+ +DL + K + R R R R
Sbjct: 181 LAKDLDASQRKFYNRQRDRKSKR 203
>gi|426242749|ref|XP_004015233.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Ovis
aries]
Length = 181
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 120/186 (64%), Gaps = 40/186 (21%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I RD
Sbjct: 82 EDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRD 141
Query: 238 LRNKLF 243
LR +L+
Sbjct: 142 LRRQLY 147
>gi|440295153|gb|ELP88066.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 198
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA LA+I GTEKD+VNC F++K+GACRHGD CSR H+RP +SPT+LL+NMY P ++
Sbjct: 1 MATDLATIHGTEKDKVNCSFFYKVGACRHGDACSRNHHRPEVSPTILLTNMYDNP--LSH 58
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+ + + + +++ F FYED+F EL++ GEI+ + VC NL +HM+GNV+V+F + +
Sbjct: 59 KEEEKMTADELKVVRDGFNVFYEDVFNELAERGEIDEMIVCANLNEHMLGNVFVRFHDVK 118
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A +A+ L R+Y GR I +S VTDFR+A C+Q E NC RGG+CNF+HV L
Sbjct: 119 GAESAMKILLARYYGGRMIQPSYSHVTDFRDAKCKQQEAGNCERGGFCNFIHVLEPNHAL 178
Query: 239 RNKLFGRYRRRSRSRSFSP 257
+ KL R R + P
Sbjct: 179 KRKLLERQPLRRQRLGLKP 197
>gi|344298239|ref|XP_003420801.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Loxodonta
africana]
Length = 181
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 120/186 (64%), Gaps = 40/186 (21%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+
Sbjct: 82 EDAERAVTELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 141
Query: 238 LRNKLF 243
LR +L+
Sbjct: 142 LRRQLY 147
>gi|194215326|ref|XP_001492664.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Equus caballus]
gi|345785118|ref|XP_853689.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|410983235|ref|XP_003997947.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Felis catus]
Length = 181
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 120/186 (64%), Gaps = 40/186 (21%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+
Sbjct: 82 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 141
Query: 238 LRNKLF 243
LR +L+
Sbjct: 142 LRRQLY 147
>gi|335289512|ref|XP_003355908.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2 [Sus
scrofa]
Length = 181
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 120/186 (64%), Gaps = 40/186 (21%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+
Sbjct: 82 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 141
Query: 238 LRNKLF 243
LR +L+
Sbjct: 142 LRRQLY 147
>gi|67474354|ref|XP_652926.1| U2 auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56469830|gb|EAL47539.1| U2 auxiliary factor, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709632|gb|EMD48863.1| U2 auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 227
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+ LASI GTEKD+VNC F+FKIGACRHGD C+R H +P IS T+LL+++Y P
Sbjct: 1 MAQDLASIHGTEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNP--YIH 58
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
++ + +KI++ F FYEDIF EL+K GEI+ + VC NL++HM GNVYV+FR+E+
Sbjct: 59 KEESSMTEDEKKKIKKDFNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEK 118
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A+ A+ L R+Y+GR I +S VTDF+EA C+Q+E C+R G+CNF+HV L
Sbjct: 119 NASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSL 178
Query: 239 RNKLFGR 245
+ KLF R
Sbjct: 179 QRKLFER 185
>gi|407044754|gb|EKE42803.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
Length = 227
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+ LASI GTEKD+VNC F+FKIGACRHGD C+R H +P IS T+LL+++Y P
Sbjct: 1 MAQDLASIHGTEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNP--YIH 58
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
++ + +KI++ F FYEDIF EL+K GEI+ + VC NL++HM GNVYV+FR+E+
Sbjct: 59 KEESSMTEDEKKKIKKDFNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEK 118
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A+ A+ L R+Y+GR I +S VTDF+EA C+Q+E C+R G+CNF+HV L
Sbjct: 119 NASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSL 178
Query: 239 RNKLFGR 245
+ KLF R
Sbjct: 179 QRKLFER 185
>gi|397490405|ref|XP_003816195.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Pan
paniscus]
Length = 181
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 127/210 (60%), Gaps = 40/210 (19%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRR 267
L+ +L+GR R F H R R+ R
Sbjct: 142 LQRQLYGRGPRHRSPPRFHTGHHPRERNHR 171
>gi|332262088|ref|XP_003280097.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 128/210 (60%), Gaps = 40/210 (19%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VN FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNRSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 82 EDAERAVAELSNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRR 267
LR +L+G RR F R R+RR
Sbjct: 142 LRRQLYGWGPRRRSPPRFHTGHRPRERNRR 171
>gi|426388322|ref|XP_004060590.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 181
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 129/210 (61%), Gaps = 40/210 (19%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+ T S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKSTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A+ L R+++G+ + VE SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 82 EDGQWAVAELNNRWFNGQAVHVELSPVTDFRESCCRQYEMGECTRGGFCNFMHLQPISQN 141
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRR 267
L+ +L+GR RR F H R R+ R
Sbjct: 142 LQRQLYGRGPRRRSPPRFHTGHHPRERNHR 171
>gi|114676803|ref|XP_001160959.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 3 [Pan
troglodytes]
Length = 181
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 125/207 (60%), Gaps = 40/207 (19%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSR 264
L+ +L+GR R F H R R
Sbjct: 142 LQRQLYGRGPRHRSPPRFHTGHHPRER 168
>gi|312071157|ref|XP_003138478.1| hypothetical protein LOAG_02893 [Loa loa]
gi|307766351|gb|EFO25585.1| hypothetical protein LOAG_02893 [Loa loa]
Length = 307
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 125/188 (66%), Gaps = 11/188 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
+K RVNC FY KIGACRHGD+CSRLH RP S T+LL N Y +I Q +
Sbjct: 19 QKHRVNCSFYLKIGACRHGDKCSRLHIRPNSSKTILLKNFYHFDGIIR-------QELSK 71
Query: 130 RKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQ 188
+ Q F++F+ +++ E+ K+GEI+ +NVCDN +HM+GNVY++F E A+ A+ AL
Sbjct: 72 EREQREFDEFFREVYLEIDEKYGEIDEMNVCDNTGEHMLGNVYIKFLHESNASNAMKALN 131
Query: 189 GRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL---FGR 245
R++ G+PI E SPV+DFR+A CRQ+E C+RGG+CNFMH+K + L+ KL G+
Sbjct: 132 NRWFDGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESGK 191
Query: 246 YRRRSRSR 253
RR+ ++
Sbjct: 192 ARRKKSAK 199
>gi|145477617|ref|XP_001424831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391898|emb|CAK57433.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 123/190 (64%), Gaps = 5/190 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ M
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPMEVA 60
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A G + I+E FE+FYED+F +L++FGEIE L VC+N+ DH++GNVYV++
Sbjct: 61 --IASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A + +ALQ Y RP+ +E+SPV DF A C+Q+ + C RGG CN++H+K I
Sbjct: 119 SELFAESCFNALQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIS 178
Query: 236 RDLRNKLFGR 245
+ LF +
Sbjct: 179 TKFKKSLFNQ 188
>gi|167377957|ref|XP_001734607.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165903812|gb|EDR29241.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 227
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 130/187 (69%), Gaps = 2/187 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+ LASI GTEKD+VNC F+FKIGACRHGD C+R H +P IS T+LL+++Y P I
Sbjct: 1 MAQDLASIHGTEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNP-YIHK 59
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
++ + + ++ F FYEDIF EL+K GE++ + VC NL++HM GNVYV+FR+E+
Sbjct: 60 EENSMTEEEKKKIKKD-FNIFYEDIFNELAKHGEVDEMLVCGNLSEHMTGNVYVRFRDEK 118
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A+ A+ L R+Y+GR I +S VTDF+EA C+Q+E C+R G+CNF+HV L
Sbjct: 119 NASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQYECGECDRHGFCNFLHVIEPNHSL 178
Query: 239 RNKLFGR 245
+ KLF R
Sbjct: 179 QRKLFER 185
>gi|94536809|ref|NP_001035515.1| splicing factor U2AF 26 kDa subunit isoform 1 [Homo sapiens]
gi|92090952|gb|AAT72770.3| U2 small nuclear RNA auxiliary factor 1-like 3 splicing variant 1
[Homo sapiens]
Length = 181
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 128/210 (60%), Gaps = 40/210 (19%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 82 EDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRR 267
L+ +L+GR RR F H R R+ R
Sbjct: 142 LQRQLYGRGPRRRSPPRFHTGHHPRERNHR 171
>gi|145478691|ref|XP_001425368.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392438|emb|CAK57970.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%), Gaps = 5/190 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ +
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPIEV- 59
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A G + I+E FE+FYED+F +L++FGEIE L VC+N+ DH++GNVYV++
Sbjct: 60 -AIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A +ALQ Y RP+ +E+SPV DF A C+Q+ + C RGG CN++H+K I
Sbjct: 119 SEYYAEGCFNALQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIS 178
Query: 236 RDLRNKLFGR 245
+ LF +
Sbjct: 179 TKFKKSLFNQ 188
>gi|145484545|ref|XP_001428282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395367|emb|CAK60884.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%), Gaps = 5/190 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ M
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPMEV- 59
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A G + I+E FE+FYED+F +L++FGEIE L VC+N+ DH++GNVYV++
Sbjct: 60 -AIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A + + LQ Y RP+ +E+SPV DF A C+Q+ + C RGG CN++H+K I
Sbjct: 119 SELFAESCFNTLQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIS 178
Query: 236 RDLRNKLFGR 245
+ LF +
Sbjct: 179 TKFKKSLFNQ 188
>gi|145530874|ref|XP_001451209.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418853|emb|CAK83812.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 122/190 (64%), Gaps = 5/190 (2%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ +
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPIEV- 59
Query: 119 GVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
A G + I+E FE+FYED+F +L++FGEIE L VC+N+ DH++GNVYV++
Sbjct: 60 -AIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
E A +ALQ Y +P+ +E+SPV DF A C+Q+ + C RGG CN++H+K I
Sbjct: 119 SEYYAEGCFNALQNLSYENKPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIA 178
Query: 236 RDLRNKLFGR 245
+ LF +
Sbjct: 179 TKFKKSLFNQ 188
>gi|297276805|ref|XP_001112161.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Macaca
mulatta]
Length = 181
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 119/186 (63%), Gaps = 40/186 (21%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
M E+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 1 MGEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
+++F EL K+GEIE +N+CD+L DH++GNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E A A+ L R+++G+ + E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++
Sbjct: 82 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 238 LRNKLF 243
LR +++
Sbjct: 142 LRRQVY 147
>gi|403331231|gb|EJY64551.1| U2 splicing factor subunit, putative [Oxytricha trifallax]
Length = 452
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 170/328 (51%), Gaps = 82/328 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA+ LA IFGTE+D+ HGD C+RLHN+P ++ T+L+ +MY+ P
Sbjct: 1 MADRLARIFGTEEDK-------------HGDTCTRLHNKPVVAQTILMPHMYENPPAAVA 47
Query: 119 GVDAQGQPIDPRKIQ--EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
D P D I+ HFE FYE++F EL+K+GE+E +++CDN+ +H++GNVY +F +
Sbjct: 48 FADGLQVP-DHLLIEAINHFESFYEEVFLELAKYGEVEEMHICDNIGEHLLGNVYCKFIQ 106
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E A A+ L GR+Y+G+ I VEFSPVTDF E+ CR + E C+RGGYCNFMH+K + +
Sbjct: 107 ELDADKAMRGLNGRYYAGKQIKVEFSPVTDFNESRCRLYVEGQCDRGGYCNFMHLKHMTK 166
Query: 237 DLRNKL-------FGRYR--------------------RRSRSRSFSPIPHLRSRHRRDG 269
+ ++ + F Y+ +S S+S SP P + R
Sbjct: 167 EFQHDMKCLMYSEFPEYKAHRDQRKRVAKQNKSIEPESNKSISKSRSPQP----KRSRSK 222
Query: 270 DRDYRRSY-----------------------RDRDYERSRRTHSRSST---------SSR 297
DR +R Y +DR ++ R+ H S + +SR
Sbjct: 223 DRKQKRRYNRKSSQSSSRSKSRNSTTSRSHSQDRRHKSKRKHHRYSRSRSRNERRARNSR 282
Query: 298 SRTPV---REGSEERRAKIEQWNREREE 322
+ V RE S+ERRA I WN E ++
Sbjct: 283 KDSRVNLGRETSKERRAIIAAWNDENDD 310
>gi|358333982|dbj|GAA30118.2| splicing factor U2AF 35 kDa subunit [Clonorchis sinensis]
Length = 220
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 117/174 (67%), Gaps = 5/174 (2%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
RVNC FYFKIGACRHG++CSRLHN+P+ T+LL N+Y P D G I+ ++
Sbjct: 11 RVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSAD--GSHINLTEV 68
Query: 133 QEH---FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
Q E F E E K+GEIE +NVCDNL DH++GNVY++FR EE A A+ L
Sbjct: 69 QAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNL 128
Query: 190 RFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
R++ GRP+ E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+L KL+
Sbjct: 129 RWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 182
>gi|211939918|gb|ACJ13439.1| U2 snRNP auxiliary factor [Amphidinium carterae]
Length = 203
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 116/175 (66%), Gaps = 1/175 (0%)
Query: 69 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQR-PDMITPGVDAQGQPI 127
TE+DRVNCPFYFKIGACR+GDRC+R+H RPT TLL+ +Y P+ + D + +
Sbjct: 14 TEEDRVNCPFYFKIGACRNGDRCNRMHTRPTKGHTLLIPRLYPSIPEALVVANDDEWDDV 73
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHAL 187
Q H E FY++++ ELS +GE+E + V DN++DHM+GN+YV++ EE A A L
Sbjct: 74 QYDLAQAHCEAFYQEVWLELSSYGEVEDMVVLDNVSDHMLGNIYVRYYREEDAEVAAQKL 133
Query: 188 QGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
RFY R I VE+SPV +F EA CR + E C RGG CNFMH K I + +R ++
Sbjct: 134 SNRFYGTRLIQVEYSPVANFSEARCRTYHETRCARGGLCNFMHTKHIPKAIRRRV 188
>gi|406696973|gb|EKD00243.1| splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 161
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA HLA+I+GTE+DRVNC FY KIGACRHGDRCSR H +P S T+LL N+Y P TP
Sbjct: 1 MASHLANIYGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTVLLPNVYNNPSH-TP 59
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
+G + ++Q F+ FYED F EL K+G ++ ++VCDN+ DH+ GNVYV++ E
Sbjct: 60 ----EGLTMTKDELQADFDRFYEDFFIELCKYGNVQEMHVCDNIGDHLEGNVYVRYEWEA 115
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG 224
+A A+ L R+Y RP+ E SPV+DFREA CRQ E C R G
Sbjct: 116 EANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQNELGECKREG 161
>gi|344304841|gb|EGW35073.1| hypothetical protein SPAPADRAFT_130696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQ 133
V C FY KIGACRHG++CS+ H +PT S TLLLSN+YQ P + T D + P++IQ
Sbjct: 17 VTCAFYNKIGACRHGEKCSKKHIKPTTSRTLLLSNLYQNPKLKTATTDDAEDELTPKQIQ 76
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
E F+ FY DIF + GEI L VC+N +H+ GNVYV+++ E A+ ++ L +++
Sbjct: 77 EIFDQFYRDIFVHFATTGEISQLVVCENENNHLNGNVYVRYKSETDASESMKQLNSEWFN 136
Query: 194 GRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF-GRYRRRSRS 252
GRP+ E SPV F EA CR +E + C+RG +CN+MHV+ + L + LF + + R
Sbjct: 137 GRPVHCELSPVDSFSEANCRAYETDVCSRGEHCNYMHVRKPTKKLADDLFKAQEKTRLLK 196
Query: 253 RSFSPIPHLR 262
R IP ++
Sbjct: 197 RMQELIPKIK 206
>gi|148677752|gb|EDL09699.1| mCG12604 [Mus musculus]
Length = 212
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 93 RLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFG 151
RLHN+PT S T+ L N+Y+ P + D + ++QEH+++F+E++F E+ K+G
Sbjct: 6 RLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYG 65
Query: 152 EIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREAT 211
E+E +NVCDNL DH++GNVYV+FR EE A A+ L R+++G+PI E SPVTDFREA
Sbjct: 66 EVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAMIDLNNRWFNGQPIHAELSPVTDFREAC 125
Query: 212 CRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
CRQ+E C RGG+CNFMH+K I R+LR +L+G
Sbjct: 126 CRQYEMGECTRGGFCNFMHLKPISRELRRELYG 158
>gi|294654416|ref|XP_456476.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
gi|199428865|emb|CAG84428.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
Length = 234
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 119/185 (64%), Gaps = 4/185 (2%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
+DR+ C FY KIGACRHG++CSR H +P+ S T+LL N+YQ P + G+ ++P+
Sbjct: 5 EDRIICTFYTKIGACRHGEKCSRKHVKPSSSDTILLPNLYQNPKL----NKNDGEELNPK 60
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
++QE+F+ FY+DIF + + FGE+ + VC+N +H+ GNVYV+F E+ A A+ L
Sbjct: 61 QVQEYFDHFYKDIFLKFALFGEVYSMVVCENDNNHLNGNVYVKFANEDSAYNAVMLLNQE 120
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRS 250
++ GRP+ E SPV F +A CR +E + CNRG +CNFMH+ L++ LF + +
Sbjct: 121 WFGGRPVHCELSPVESFHDANCRAYESSTCNRGDHCNFMHIHKPTPQLKSSLFKSQEKST 180
Query: 251 RSRSF 255
++
Sbjct: 181 LTKQL 185
>gi|355727234|gb|AES09127.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mustela putorius
furo]
Length = 168
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 115/165 (69%), Gaps = 2/165 (1%)
Query: 94 LHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGE 152
LHN+PT S T++L N+YQ P D + ++QEH+++F+E++F EL K+GE
Sbjct: 1 LHNKPTFSQTIVLLNLYQNPQNTAQTADGSHCHVSDEEVQEHYDNFFEEVFTELQEKYGE 60
Query: 153 IECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
IE +NVCDNL DH++GNVYV+FR EE A A+ L R+++G+ + E SPVTDFRE+ C
Sbjct: 61 IEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCC 120
Query: 213 RQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRY-RRRSRSRSFS 256
RQ+E C RGG+CNFMH++ I R+L+ +L+GR R RS RS +
Sbjct: 121 RQYEMGECTRGGFCNFMHLRPISRNLQRQLYGRGPRHRSPPRSHT 165
>gi|358375412|dbj|GAA91994.1| splicing factor U2AF 23 kDa subunit [Aspergillus kawachii IFO 4308]
Length = 184
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 123/208 (59%), Gaps = 38/208 (18%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H +P+ S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED++ E+ K+GE+E L VCDN DH+IGNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK----LI 234
A AA AL R G C RGG+CNF+H K +
Sbjct: 115 DAQAACDALNSRCGEG-------------------------CVRGGFCNFIHRKDPSNEL 149
Query: 235 GRDLR---NKLFGRYRRRSRSRSFSPIP 259
RDLR K R +RS S SP P
Sbjct: 150 DRDLRLSTKKWLKERGRDARSVSRSPSP 177
>gi|440302723|gb|ELP95030.1| splicing factor U2AF 35 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 263
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 111/174 (63%), Gaps = 2/174 (1%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
K++ C F+FKIGACRHGD C + H RP S TLL + MYQ P + +++G D +
Sbjct: 14 KEKPICDFFFKIGACRHGDSCKKQHFRPESSQTLLFTRMYQNPKIRID--ESEGLEKDEK 71
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
K++ F +FYED+F ++ +GE+E VC N DHM+GNVYV++ +EE+A A L GR
Sbjct: 72 KMRHDFNEFYEDVFSQIQNYGEVEEFIVCGNDNDHMMGNVYVKYTKEEEAKKAKDELTGR 131
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
+Y+G+ + F VTDFREA CRQ E+ C RGG CNF+HV L+ LF
Sbjct: 132 YYAGKMLQPSFCRVTDFREAICRQQEQGTCTRGGQCNFIHVIEPDPSLKRGLFA 185
>gi|380807533|gb|AFE75642.1| splicing factor U2AF 35 kDa subunit isoform b, partial [Macaca
mulatta]
Length = 192
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 95 HNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEI 153
HN+PT S T+L+ N+Y+ P D + ++QEH+++F+E++F E+ K+GE+
Sbjct: 1 HNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEV 60
Query: 154 ECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCR 213
E +NVCDNL DH++GNVYV+FR EE A A+ L R+++G+PI E SPVTDFREA CR
Sbjct: 61 EEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCR 120
Query: 214 QFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
Q+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 121 QYEMGECTRGGFCNFMHLKPISRELRRELY 150
>gi|150951186|ref|XP_001387460.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23) [Scheffersomyces stipitis CBS 6054]
gi|149388389|gb|EAZ63437.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23), partial [Scheffersomyces stipitis CBS 6054]
Length = 184
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 118/173 (68%), Gaps = 4/173 (2%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
+DR+ C FY KIGACRHG++CSR H RP S T+LL N+YQ P + +G+ ++P+
Sbjct: 11 EDRLPCTFYNKIGACRHGEKCSRKHIRPLTSFTILLPNLYQNPKL----NKNEGEELNPK 66
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
++Q++F+ F++DIF + + GEI+ L VC+N +H+ GNVYV+F+ +++AA A L
Sbjct: 67 QLQQNFDQFFKDIFVKFATLGEIKELVVCENENNHLNGNVYVRFKTKQEAAEATLLLNQE 126
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
+++ RP+ E SPV+ F EA CR +E ++C RG +CNFMHV+ + L LF
Sbjct: 127 WFNARPVHCELSPVSSFPEANCRAYETSSCTRGDHCNFMHVRHPTQSLVESLF 179
>gi|170580643|ref|XP_001895352.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158597751|gb|EDP35805.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 294
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 115/189 (60%), Gaps = 27/189 (14%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
+K RVNC FY KIGACRHGD+CSRLH PT S
Sbjct: 19 QKHRVNCSFYLKIGACRHGDKCSRLHTXPTSSKV----------------------NFPK 56
Query: 130 RKIQEHFEDFYEDIFEELSK-FGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQ 188
K Q F++F+ +++ E+ + +GEI+ +NVCDN +HM+GNVY++F E A A+ AL
Sbjct: 57 EKEQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNAXNAVKALN 116
Query: 189 GRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL----FG 244
R+++G+PI E SPV+DFR+A CRQ+E C+RGG+CNFMH+K + L+ KL G
Sbjct: 117 NRWFNGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESEG 176
Query: 245 RYRRRSRSR 253
R RR+ ++
Sbjct: 177 RKRRKKSAK 185
>gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus]
Length = 254
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
Query: 81 KIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFY 140
++G H S L + T++L N+Y+ P D + ++QEH+++F+
Sbjct: 57 RVGYTLHAVPLSELRSLLNFVQTIVLLNLYRNPQNTAQTADGSHCHVSDVEVQEHYDNFF 116
Query: 141 EDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
E++F EL K+GEIE +NVCDNL DH++GNVYV+FR EE A A+ L R+++G+ +
Sbjct: 117 EEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHA 176
Query: 200 EFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRY-RRRSRSRSFS 256
E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I R+LR +L+GR R RS RS +
Sbjct: 177 ELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRHRSPPRSHT 234
>gi|294875296|ref|XP_002767259.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239868814|gb|EEQ99976.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 235
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 102/179 (56%), Gaps = 43/179 (24%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPD---M 115
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR HNRP S T+LL MYQ P
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIA 60
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ G D + D QEHFE FYE++F EL+ +
Sbjct: 61 LAEGQDVADEQAD--AAQEHFEAFYEEVFLELANY------------------------- 93
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
G FY+GR I E+SPVTDF EA CRQF++ C+RGG+CNF+H K +
Sbjct: 94 -------------GTFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 139
>gi|444513449|gb|ELV10328.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 365
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 103 TLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDN 161
T+ L N+Y+ P + D + ++QEH+++F+E++F E+ K+GE+E +NVCDN
Sbjct: 127 TIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN 186
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCN 221
L DH++GNVYV+FR EE A A+ L R+++G+PI E SPVTDFREA CRQ+E C
Sbjct: 187 LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECT 246
Query: 222 RGGYCNFMHVKLIGRDLRNKLFGRYRRR 249
RGG+CNFMH+K I R+LR +L+GR R++
Sbjct: 247 RGGFCNFMHLKPISRELRRELYGRRRKK 274
>gi|448519331|ref|XP_003868065.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis Co 90-125]
gi|380352404|emb|CCG22630.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis]
Length = 280
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQ 133
+ C FY KIGACRHG++CS+ H +PT S TLLL+N+YQ P + + + + ++IQ
Sbjct: 46 ITCSFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKL----NKNESEEVTEKQIQ 101
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
E F+ FY+DIF L+ GEI VC+N +H+ GNVYVQF A+ L +++
Sbjct: 102 EQFDLFYQDIFIHLANMGEIYDFVVCENENNHLNGNVYVQFVSSSDASTVNTTLNQEWFN 161
Query: 194 GRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
GRP+ + SPVTDF +A CR ++ N+C RG CN+MH++ LR L+
Sbjct: 162 GRPVHSDLSPVTDFADARCRAYDTNSCERGEMCNYMHIRQPSPKLRELLY 211
>gi|324505230|gb|ADY42252.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 151
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 103/138 (74%), Gaps = 4/138 (2%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116
L+ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H+RPT SPT+LL N Y P +
Sbjct: 15 LSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVD 74
Query: 117 TPGVDA--QGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQ 173
DA + DP + Q++F++FYE++F EL K+GEI+ +NVC+N+ +HMIGNVYV+
Sbjct: 75 VRQADAFDKVGKKDPEE-QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVK 133
Query: 174 FREEEQAAAALHALQGRF 191
F EE A A+ LQ R+
Sbjct: 134 FVREEDAEKAVKDLQNRW 151
>gi|260945991|ref|XP_002617293.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
gi|238849147|gb|EEQ38611.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
Length = 258
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 42 PSQDKDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTIS 101
P +D + A HL +F + + C FY KIGACRHGD+CSR H RPT S
Sbjct: 4 PFRDMGRGAQLHYVSCTAARHLLHLFSMDSQAI-CTFYQKIGACRHGDKCSRKHIRPTES 62
Query: 102 PTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDN 161
T+LL+N+Y + A+ + P E F+ FY DI+ ++ GEIE + VC+N
Sbjct: 63 KTVLLANLYTQ--------SAEKNKVSP----ESFDQFYADIYTHAAQSGEIEQMVVCEN 110
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCN 221
H+ GNVYV++ + + A A+ L +Y GRP+ E SPV++F EA CR ++ N C+
Sbjct: 111 ENFHLCGNVYVRYSDTQSADKAVAQLNQEWYGGRPVYCELSPVSNFAEANCRAYDNNQCS 170
Query: 222 RGGYCNFMHVKLIGRDLRNKL 242
RG +CNFMH + +LR +L
Sbjct: 171 RGDHCNFMHTRRPSSELRAQL 191
>gi|344234071|gb|EGV65941.1| splicing factor U2AF 23 kDa subunit [Candida tenuis ATCC 10573]
Length = 213
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 115/182 (63%), Gaps = 6/182 (3%)
Query: 72 DRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRK 131
D +NC FY KIGACRHG++CS+ H +P S T+LL+N+YQ P + + Q ++P++
Sbjct: 3 DFMNCQFYTKIGACRHGEKCSKRHTKPLTSYTVLLANLYQNPKL-----NKNEQDLNPKQ 57
Query: 132 IQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
I+E+FE+FY+D+F L K EI L VC+N +H+ GNVY +F+ EE A A+ L +
Sbjct: 58 IREYFENFYKDVFIRLGKIEEIAALVVCENENNHLNGNVYCRFKNEEGARRAVVELNQEW 117
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSR 251
+ RP+ E SPV F +A CR ++ N+C+R +CNFMHV +L +LF +
Sbjct: 118 FGSRPVHCELSPVQSFHDANCRDYDTNSCSR-DHCNFMHVIRPSDELERQLFSAQAKSVV 176
Query: 252 SR 253
SR
Sbjct: 177 SR 178
>gi|393907857|gb|EFO28010.2| hypothetical protein LOAG_00486 [Loa loa]
Length = 251
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 102/140 (72%), Gaps = 6/140 (4%)
Query: 56 GLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
GL+ AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H+RPT SPT+LL N Y P +
Sbjct: 114 GLSGAEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIV 173
Query: 116 ITPGVDA---QGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVY 171
DA G+ D Q +F++FYE++F EL K+GEI+ +NVC+N+ +HMIGNVY
Sbjct: 174 DVRQADAFDKVGKKNDEE--QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVY 231
Query: 172 VQFREEEQAAAALHALQGRF 191
V+F EE A A+ L+ R+
Sbjct: 232 VKFMREEDAEKAVKDLENRW 251
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 181 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 240
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 241 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 297
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 298 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 357
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R + R R RR+ D Y+R S R R
Sbjct: 358 NRDIYLSPDQTGSSFGKNSERREKMGHHDDYYSRQRGRRNPSPDHSYKRNGESERKRSSH 417
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 418 RGKKSHKRTSKSRERHNSPSR 438
>gi|354544051|emb|CCE40773.1| hypothetical protein CPAR2_108080 [Candida parapsilosis]
Length = 307
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQ 133
+ C FY KIGACRHG++CS+ H +PT S TLLL+N+YQ P + + + + ++IQ
Sbjct: 75 ITCAFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKLNK----NETEELTEKQIQ 130
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
E F+ FY+DIF L GEI L VC+N +H+ GNVYVQF A+ AL +++
Sbjct: 131 EQFDLFYQDIFIHLGSMGEIYDLVVCENENNHLNGNVYVQFNSASDASLVNTALNQEWFN 190
Query: 194 GRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
GRP+ + SPV F +A CR ++ N+C RG CN+MH++ L+ L+
Sbjct: 191 GRPVHSDLSPVDSFPDAHCRAYDTNSCERGEMCNYMHIRQPTTSLKQSLY 240
>gi|255715815|ref|XP_002554189.1| KLTH0E16302p [Lachancea thermotolerans]
gi|238935571|emb|CAR23752.1| KLTH0E16302p [Lachancea thermotolerans CBS 6340]
Length = 189
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 109/165 (66%), Gaps = 11/165 (6%)
Query: 78 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 137
FY+KIGACRHGDRCS+ H RP SPT+L+ NMY+RP+ + G +AQ Q F+
Sbjct: 25 FYYKIGACRHGDRCSKKHIRPLHSPTVLVPNMYRRPE--SEGPEAQ---------QRDFD 73
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
FYED++ E KFGE++ + VC+N DH+ GNVY+ F A +A + R+++ RP+
Sbjct: 74 AFYEDVYMEACKFGELQAMVVCENKNDHLNGNVYLMFTNSRDANSAKDSFNTRWFNERPL 133
Query: 198 IVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
EFS V+DFREA CR+ + +C RG CNFMHV+ RDL++ L
Sbjct: 134 YCEFSHVSDFREAICRKHDMRSCERGDECNFMHVQRPTRDLQSDL 178
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 181 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 240
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 241 E---FSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 297
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 298 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 357
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R + R R RR+ D Y+R S R +
Sbjct: 358 NRDIYLSPDQTGSSFGKNSERREKMGHHDHYYSRQRGRRNPSPDHTYKRNGESERKKSSH 417
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 418 RGKKSHKRTSKSRERHNSPSR 438
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 99/170 (58%), Gaps = 12/170 (7%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ M G D DP
Sbjct: 159 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDD----YDP 214
Query: 130 --------RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAA 181
+I + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+
Sbjct: 215 DANLEYSEEEIYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQ 274
Query: 182 AALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AAL GR+Y+GR + EF PVT + A C FE C RG YCNF+HV
Sbjct: 275 AALSLFNGRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 324
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 230
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 231 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 287
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 288 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 347
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R + R R RR+ D Y+R S R +
Sbjct: 348 NRDIYLSSDQTGSSFGKNSERREKMGHHDHYYSRQRGRRNPSPDHTYKRNGESERKKSSH 407
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 408 RGKKSHKRTSKSRERHNSPSR 428
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 230
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 231 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 287
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 288 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 347
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R + R R RR+ D Y+R S R +
Sbjct: 348 NRDIYLSSDQTGSSFGKNSERREKMGHHDHYYSRQRGRRNPSPDHTYKRNGESERKKSSH 407
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 408 RGKKSHKRTSKSRERHNSPSR 428
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 196 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 255
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 256 E---FSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 312
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 313 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 372
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R + R R RR+ D Y+R S R +
Sbjct: 373 NRDIYLSPDQTGSSFGKNSERREKMGHHDHYYSRQRGRRNPSPDHTYKRNGESERKKSSH 432
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 433 RGKKSHKRTSKSRERHNSPSR 453
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRRHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 230
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 231 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 287
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 288 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 347
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R + R R RR+ D Y+R S R +
Sbjct: 348 NRDIYLSSDQTGSSFGKNSERREKMGHHDHYYSRQRGRRNPSPDHTYKRNGESERKKSSH 407
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 408 RGKKSHKRTSKSRERHNSPSR 428
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 153 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 212
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 213 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 269
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 270 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 329
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R + R R RR+ D Y+R S R +
Sbjct: 330 NRDIYLSPDQTGSSFGKNSERREKMGHHDHYYSRQRGRRNPSPDHSYKRNGESERKKSSH 389
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 390 RGKKSHKRTSKSRERHNSPSR 410
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 99/170 (58%), Gaps = 12/170 (7%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ M G D DP
Sbjct: 400 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDD----YDP 455
Query: 130 --------RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAA 181
+I + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+
Sbjct: 456 DANLEYSEEEIYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQ 515
Query: 182 AALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AAL GR+Y+GR + EF PVT + A C FE C RG YCNF+HV
Sbjct: 516 AALSLFNGRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 565
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 192 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 251
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ +I + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 252 E---YSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 308
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 309 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 357
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 164 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 223
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ +I + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 224 E---YSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 280
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 281 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 177 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 236
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ +I + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 237 E---YSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 293
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 294 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 342
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 128/261 (49%), Gaps = 34/261 (13%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 165 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 224
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 225 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 281
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 282 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 341
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 342 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 401
Query: 284 RSRRTHSRSSTS-----SRSR 299
R +++H R+S S SRSR
Sbjct: 402 RGKKSHKRTSKSRERHNSRSR 422
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 124/252 (49%), Gaps = 29/252 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 342
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 343 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 402
Query: 284 RSRRTHSRSSTS 295
R +++H R+S S
Sbjct: 403 RGKKSHKRTSKS 414
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 124/252 (49%), Gaps = 29/252 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 342
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 343 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 402
Query: 284 RSRRTHSRSSTS 295
R +++H R+S S
Sbjct: 403 RGKKSHKRTSKS 414
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 164 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 223
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ +I + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 224 E---YSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 280
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 281 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 124/252 (49%), Gaps = 29/252 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 342
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 343 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 402
Query: 284 RSRRTHSRSSTS 295
R +++H R+S S
Sbjct: 403 RGKKSHKRTSKS 414
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 124/252 (49%), Gaps = 29/252 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 342
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 343 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 402
Query: 284 RSRRTHSRSSTS 295
R +++H R+S S
Sbjct: 403 RGKKSHKRTSKS 414
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 124/252 (49%), Gaps = 29/252 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 153 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 212
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 213 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 269
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 270 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 329
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 330 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 389
Query: 284 RSRRTHSRSSTS 295
R +++H R+S S
Sbjct: 390 RGKKSHKRTSKS 401
>gi|441672642|ref|XP_004092375.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
Length = 213
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 103/149 (69%), Gaps = 1/149 (0%)
Query: 96 NRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIE 154
NR T+L+ N+Y+ P D + ++QEH+++F+E++F E+ K+GE+E
Sbjct: 11 NRRLARFTILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVE 70
Query: 155 CLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQ 214
+NVCDNL DH++GNVYV+FR EE A A+ L R+++G+PI E SPVTDFREA CRQ
Sbjct: 71 EMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQ 130
Query: 215 FEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 131 YEMGECTRGGFCNFMHLKPISRELRRELY 159
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 128/261 (49%), Gaps = 34/261 (13%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 342
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 343 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 402
Query: 284 RSRRTHSRSSTS-----SRSR 299
R +++H R+S S SRSR
Sbjct: 403 RGKKSHKRTSKSRERHNSRSR 423
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 128/261 (49%), Gaps = 34/261 (13%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 342
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 343 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 402
Query: 284 RSRRTHSRSSTS-----SRSR 299
R +++H R+S S SRSR
Sbjct: 403 RGKKSHKRTSKSRERHNSRSR 423
>gi|432119315|gb|ELK38408.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 121
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 94/145 (64%), Gaps = 24/145 (16%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCS LHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSWLHNKPTFSQTVALLNVYRNPHNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D E+ K+GE+E +NVCDNL DH++GNVYVQFR EE
Sbjct: 61 SAD------------------------EMEKYGEVEEMNVCDNLRDHLVGNVYVQFRPEE 96
Query: 179 QAAAALHALQGRFYSGRPIIVEFSP 203
A A+ L R+++G+PI E SP
Sbjct: 97 DAEKAVMDLDNRWFNGQPIYAELSP 121
>gi|402585483|gb|EJW79423.1| U2 snRNP splicing factor small subunit, partial [Wuchereria
bancrofti]
Length = 160
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 101/148 (68%), Gaps = 8/148 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
+K RVNC FY KIGACRHGD+CSRLH RP S T+LL N Y D+I Q
Sbjct: 19 QKHRVNCSFYLKIGACRHGDKCSRLHTRPISSKTILLKNFYHFGDIIR-------QDFSK 71
Query: 130 RKIQEHFEDFYEDIFEELSK-FGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQ 188
K Q F++F+ +++ E+ + +GEI+ +NVCDN +HM+GNVY++F E A+ A+ AL
Sbjct: 72 EKEQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNASNAVKALN 131
Query: 189 GRFYSGRPIIVEFSPVTDFREATCRQFE 216
R+++G+PI E SPV+DFR+A CRQ+E
Sbjct: 132 NRWFNGKPIHCELSPVSDFRDACCRQYE 159
>gi|380802765|gb|AFE73258.1| splicing factor U2AF 26 kDa subunit isoform 1, partial [Macaca
mulatta]
Length = 131
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 104/169 (61%), Gaps = 40/169 (23%)
Query: 78 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 137
FYFKIGACRHGDRCSRLHN+PT S
Sbjct: 2 FYFKIGACRHGDRCSRLHNKPTFS------------------------------------ 25
Query: 138 DFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRP 196
+++F EL K+GEIE +N+CD+L DH++GNVYV+FR EE A A+ L R+++G+
Sbjct: 26 ---QEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQA 82
Query: 197 IIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGR 245
+ E SPVTDFRE+ CRQ+E C RGG+CNFMH++ I ++LR +++GR
Sbjct: 83 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVYGR 131
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 128/244 (52%), Gaps = 25/244 (10%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV------ 120
GTEKDR NCPFY K G+CR GDRCSR HN PT S TLL+ M+ IT G+
Sbjct: 164 IGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 218
Query: 121 ----DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
DA + D Q+ F +FYED+ E G++ V N H+ GNVYVQ++
Sbjct: 219 DYDTDASLEYSDEETYQQ-FLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQT 277
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E+ AAL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV +
Sbjct: 278 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV---FK 334
Query: 237 DLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSS 296
+ N+ + +R P ++ ++ +R R S+RD Y RSRR S S S
Sbjct: 335 NPNNEFW------EANRDIRVSPERTNQLSKNSERRNRSSHRDDYYGRSRRRGSPSPDHS 388
Query: 297 RSRT 300
R
Sbjct: 389 YRRN 392
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 123/252 (48%), Gaps = 29/252 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 AFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 342
Query: 232 ---KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYE 283
+ D FG+ RR LR R D Y+R S R R
Sbjct: 343 NRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSH 402
Query: 284 RSRRTHSRSSTS 295
R +++H R+S S
Sbjct: 403 RGKKSHKRTSKS 414
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 132/267 (49%), Gaps = 30/267 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 2 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 61
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 62 E---FSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 118
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+++GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 119 ALSLFNGRWHAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 178
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRD--GDRDYRR---SYRDRDYE 283
+ D FG+ R R R RR+ D Y+R S R +
Sbjct: 179 NRDIYLSPDQTGSSFGKNSERREKMGHHDHYCSRQRGRRNPSPDHTYKRNGESERKKSSH 238
Query: 284 RSRRTHSRSSTS-SRSRTPVREGSEER 309
R +++H R+S S R +P R G+ R
Sbjct: 239 RGKKSHKRTSKSRERHNSPSRGGNRHR 265
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|149244812|ref|XP_001526949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449343|gb|EDK43599.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 295
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQ 133
+ C FY KIGACRHG++CS+ H +PT S TL+L+N+YQ P + D Q ++Q
Sbjct: 52 ITCQFYNKIGACRHGEKCSKKHIKPTNSKTLILANLYQNPKLNKNESDELSQ----LQLQ 107
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
E + F++D+F LS+ GE+ L VC+N +H+ GNVYV+F E+ A A L +++
Sbjct: 108 ESLDLFFQDVFIHLSQKGEVASLVVCENENNHLNGNVYVRFYSEKDAQQANQELNQEWFN 167
Query: 194 GRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
GRP+ + SPV F EA CR ++ N+C RG CN+MH++L + L +KL
Sbjct: 168 GRPVHSDLSPVYSFDEARCRAYDTNSCERGEMCNYMHLRLPTKSLLDKL 216
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 133/278 (47%), Gaps = 39/278 (14%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 165 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASL 224
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 225 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 281
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 282 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 341
Query: 232 ---KLIGRDLRNKLFGRYRRRSR------------SRSFSPIPHLRSRHRRDGDRDYRRS 276
+ D FG+ R + R SP P + + +R R
Sbjct: 342 NRDLYLSPDRTGSSFGKNLDRGKRAGHHDDYYGRTRRRRSPSPDHSYKRNGESERKRRSG 401
Query: 277 YRDRDYERSRRTHSRSSTSSRSRTPVRE---GSEERRA 311
+R + + R+H R S+ SR R R GS+ RR
Sbjct: 402 HRGKKAHKRSRSHERHSSRSRGRKRNRSRSRGSQMRRG 439
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 163 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 222
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 223 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 279
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 280 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 328
>gi|190347807|gb|EDK40149.2| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 138/252 (54%), Gaps = 23/252 (9%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C FY KIGACRHGD+CSR H P S T+L+ N+Y+ P +G ++IQ+
Sbjct: 5 CTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYRNP---------KGSS---QQIQQR 52
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
F+ FY+D+F +++ GEI+ + VC+N DH+ GNVYV+F + A ++AL +Y
Sbjct: 53 FDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEEWYDAL 112
Query: 196 PIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF---GRYRRRSRS 252
PI E SPV F++A CR ++ C+RGG+CNFMH++ ++++ L +++
Sbjct: 113 PIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLHQAQDKWKVEKAL 172
Query: 253 RSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAK 312
+P L R+ ++Y +R+ +RR S + S V E SE+R +
Sbjct: 173 EKVAPDDPLVV-----AMRERVKAYEERE---ARRKESEKKVTQESEKRVTEESEKRVTE 224
Query: 313 IEQWNREREENQ 324
+ R EEN+
Sbjct: 225 ENEKKRVTEENE 236
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|146415096|ref|XP_001483518.1| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 138/252 (54%), Gaps = 23/252 (9%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C FY KIGACRHGD+CSR H P S T+L+ N+Y+ P +G ++IQ+
Sbjct: 5 CTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYRNP---------KGSS---QQIQQR 52
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
F+ FY+D+F +++ GEI+ + VC+N DH+ GNVYV+F + A ++AL +Y
Sbjct: 53 FDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEEWYDAL 112
Query: 196 PIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF---GRYRRRSRS 252
PI E SPV F++A CR ++ C+RGG+CNFMH++ ++++ L +++
Sbjct: 113 PIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLHQAQDKWKVEKAL 172
Query: 253 RSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSSTSSRSRTPVREGSEERRAK 312
+P L R+ ++Y +R+ +RR S + S V E SE+R +
Sbjct: 173 EKVAPDDPLVV-----AMRERVKAYEERE---ARRKESEKKVTQESEKRVTEESEKRVTE 224
Query: 313 IEQWNREREENQ 324
+ R EEN+
Sbjct: 225 ENEKKRVTEENE 236
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|167396211|ref|XP_001741956.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165893246|gb|EDR21570.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 278
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 64 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQ 123
A I GT K++ C F++KIGACRHGD C++ H +P S TLL + MYQ P D +
Sbjct: 10 AIINGT-KEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNPKKRID--DGE 66
Query: 124 GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAA 183
D +KI F +FYED+F EL +GEI VC N DHM+GNVYV++ EE AAAA
Sbjct: 67 ALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAA 126
Query: 184 LHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
AL GR+Y+ + + F VT+F+EA CRQ + C RGG CNF+HV R+L+ L
Sbjct: 127 KKALTGRYYAKKILAPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKYDL 185
>gi|448097995|ref|XP_004198814.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359380236|emb|CCE82477.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 117/187 (62%), Gaps = 6/187 (3%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
E ++ C FY KIGACRHG++CSR H +PT S T+L+ N+Y+ P + Q PI
Sbjct: 4 ENPKLICTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPKFSNNEANGQQVPITG 63
Query: 130 RK-IQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQ 188
K +Q+HFEDFY+D+F + G+++ + VC+N +H+ GNVY++F + A A+ L
Sbjct: 64 EKELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFSSRDIAYDAVVKLN 123
Query: 189 GRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRR 248
+Y GRP+ E SPV +A CR ++ N+C+RG +CNFMH++ L+N LF
Sbjct: 124 QEWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKNFLF----- 178
Query: 249 RSRSRSF 255
R++ +SF
Sbjct: 179 RAQEKSF 185
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 125/241 (51%), Gaps = 17/241 (7%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY--------QRPDMITP 118
+GTEKDR NCPFY K GACR G+RCSR HN P+ S TLL+ +M+ +R D T
Sbjct: 152 YGTEKDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFGMEQCRRDDYDTD 211
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+ +I + F +FY D+ E G++ V N H+ GNVYVQ++ EE
Sbjct: 212 ASLEYGE----EEIYQQFLEFYADVVPEFKNAGKVVQFKVSCNFEPHLRGNVYVQYQTEE 267
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
+ A GR+Y+ R + EFSPVT ++ A C FE C RG +CNF+HV ++
Sbjct: 268 ECLKAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV---FKNP 324
Query: 239 RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYR--DRDYERSRRTHSRSSTSS 296
N+ + R S S I + R R GD + R Y DY +R S+ SS
Sbjct: 325 NNEFWEANRDIHLSPDRSGISERKDRSSRHGDHGHHRRYHSPSPDYSYNRNGDSKRKKSS 384
Query: 297 R 297
R
Sbjct: 385 R 385
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 169 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 228
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 229 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 285
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 286 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 334
>gi|345327120|ref|XP_001515642.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 103/178 (57%), Gaps = 16/178 (8%)
Query: 64 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV--- 120
A + TEKDR NCPFY K G+CR GDRCSR HN PT+SPTLL+ +M+ IT G+
Sbjct: 159 ADVRITEKDRANCPFYIKTGSCRFGDRCSRKHNYPTLSPTLLIRSMF-----ITFGMEQC 213
Query: 121 -------DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQ 173
DA + + Q+ F DFYED+ E G++ V N H+ GNVYVQ
Sbjct: 214 RRDDYDTDASLEYSEEETYQQ-FLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQ 272
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
++ EE+ A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 273 YQSEEECQEAFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFERQKCPRGKHCNFLHV 330
>gi|363756078|ref|XP_003648255.1| hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891455|gb|AET41438.1| Hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 258
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 132/236 (55%), Gaps = 21/236 (8%)
Query: 19 RFLREGKREEVCVWIDKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPF 78
RF R+ R C+ + ++ + D + + L +IF D ++ F
Sbjct: 12 RFKRDQIRASTCLTMKGINGMSIHYYDGSNGCFYVIVAL-------NIFWLLTD-LHSHF 63
Query: 79 YFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQ-EHFE 137
Y+KIGACRHGD+CS+ H+RP S T+++ NMY P+ I+ K+Q E F+
Sbjct: 64 YYKIGACRHGDKCSKRHSRPINSQTIVIYNMYIPPN-----------DINQVKLQAEDFD 112
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
FYED+F E +KFGE++ + VC+N DH+ GNVY++F + A AA A R+Y RP+
Sbjct: 113 FFYEDVFLEAAKFGEVQEIIVCENKTDHLNGNVYIRFSTSDAAKAARDAFVTRWYGERPL 172
Query: 198 IVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNK-LFGRYRRRSRS 252
+ S VTDFREA C+ +EE C RG CNF+H + + L N L ++++R S
Sbjct: 173 YCDLSHVTDFREAVCKSYEEGKCGRGEQCNFIHRRRVDYSLANGLLLSQWKKRHIS 228
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY--------QRPDMITP 118
GTEKDR NCPFY K GACR GDRCSR HN PT S TLL+ M+ +R D T
Sbjct: 192 IGTEKDRANCPFYIKTGACRFGDRCSRKHNYPTSSQTLLIRGMFVTFGMEQCKRDDYDT- 250
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
DA + +I + F DFYED+ E G++ V N H+ GNVYVQ++ E+
Sbjct: 251 --DASLE-YSEEEIYQQFLDFYEDVLPEFKNVGKVVQFKVSCNFEPHLRGNVYVQYQSEQ 307
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
+ AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 308 ECQEALTLFNGRWYAGRQLQCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 360
>gi|448101861|ref|XP_004199664.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359381086|emb|CCE81545.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 119/187 (63%), Gaps = 6/187 (3%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI-D 128
E ++ C FY KIGACRHG++CSR H +PT S T+L+ N+Y+ P + Q PI D
Sbjct: 4 ENPKLICTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPRFANNEGNGQQAPITD 63
Query: 129 PRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQ 188
+++Q+HFEDFY+D+F + G+++ + VC+N +H+ GNVY++F + A A+ L
Sbjct: 64 EKELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFASRDIAYDAVVKLN 123
Query: 189 GRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRR 248
+Y GRP+ E SPV +A CR ++ N+C+RG +CNFMH++ L++ LF
Sbjct: 124 QEWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKSFLF----- 178
Query: 249 RSRSRSF 255
R++ +SF
Sbjct: 179 RAQEKSF 185
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 194 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 253
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 254 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 310
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 311 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 359
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 126/261 (48%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR G RCSR HN PT SPTLL+ +M+ R D P
Sbjct: 181 EKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 240
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 241 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 297
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 298 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 357
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYR-----RSYRDRDYE 283
+ D FG+ R + R RR+ D+ S R R
Sbjct: 358 NRDTYLSPDQTGSSFGKNSERREKMGHHDHYYSRQWGRRNPSPDHSCKRNGESERKRSSH 417
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 418 RGKKSHKRTSKSRERHNSPSR 438
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P SPTLL+ +M+ R D P
Sbjct: 169 EKDRANCPFYNKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASL 228
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+
Sbjct: 229 E---YSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQT 285
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 286 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 345
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSY-RDRDYERSRR 287
+ D FG+ R + H R R RR D+ SY R+ + ER RR
Sbjct: 346 NRDLYLSPDRTGSAFGKNSERRDRTGYHDEYHGRLRRRRSPSADH--SYKRNGESERKRR 403
Query: 288 THSRSSTSSR 297
+ R S +
Sbjct: 404 SSHRGKKSHK 413
>gi|67482135|ref|XP_656417.1| U2 snRNP auxiliary factor small subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473613|gb|EAL51031.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708944|gb|EMD48310.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 279
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
Query: 66 IFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ 125
I K++ C F++KIGACRHGD C++ H +P S TLL + MYQ P D +
Sbjct: 12 IINGTKEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNPKKRID--DGEAL 69
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
D +KI F +FYED+F EL +GEI VC N DHM+GNVYV++ EE AAAA
Sbjct: 70 ERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKK 129
Query: 186 ALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
AL GR+Y+ + + F VT+F+EA CRQ + C RGG CNF+HV R+L+ L
Sbjct: 130 ALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKYDL 186
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 126/261 (48%), Gaps = 30/261 (11%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR G RCSR HN PT SPTLL+ +M+ R D P
Sbjct: 196 EKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 255
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 256 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 312
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV----------- 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 313 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEA 372
Query: 232 ---KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYR-----RSYRDRDYE 283
+ D FG+ R + R RR+ D+ S R R
Sbjct: 373 NRDTYLSPDQTGSSFGKNSERREKMGHHDHYYSRQWGRRNPSPDHSCKRNGESERKRSSH 432
Query: 284 RSRRTHSRSSTS-SRSRTPVR 303
R +++H R+S S R +P R
Sbjct: 433 RGKKSHKRTSKSRERHNSPSR 453
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 28 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 87
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 88 E---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 144
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 145 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 193
>gi|407038759|gb|EKE39293.1| zinc finger c-x8-c-x5-c-x3-h type domain containing protein
[Entamoeba nuttalli P19]
Length = 279
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
Query: 66 IFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ 125
I K++ C F++KIGACRHGD C++ H +P S TLL + MYQ P D +
Sbjct: 12 IINGTKEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNPKKRID--DGEAL 69
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
D +KI F +FYED+F EL +GEI VC N DHM+GNVYV++ EE AAAA
Sbjct: 70 ERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKK 129
Query: 186 ALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
AL GR+Y+ + + F VT+F+EA CRQ + C RGG CNF+HV R+L+ L
Sbjct: 130 ALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKYDL 186
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P SPTLL+ +M+ R D P
Sbjct: 173 EKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASL 232
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 233 E---YSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQA 289
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 290 ALALFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 338
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P+ SPTLL+ +M+ R D P
Sbjct: 165 EKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 224
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 225 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 281
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 282 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P+ SPTLL+ +M+ R D P
Sbjct: 165 EKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 224
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 225 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 281
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 282 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 120/226 (53%), Gaps = 25/226 (11%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV------ 120
GTEKDR NCPFY K G+CR GDRCSR HN PT S TLL+ M+ IT G+
Sbjct: 150 IGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 204
Query: 121 ----DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
DA + D Q+ F +FYED+ E G++ V N H+ GNVYVQ++
Sbjct: 205 DYDTDASLEYSDEETYQQ-FLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQS 263
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E+ AAL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV +
Sbjct: 264 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV---FK 320
Query: 237 DLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDY 282
+ N L+ SR P ++ ++ +R R S+RD Y
Sbjct: 321 NPSNDLW------DASRDIRISPERTNQLSKNSERRNRSSHRDDYY 360
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P+ SPTLL+ +M+ R D P
Sbjct: 220 EKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 279
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 280 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 336
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 337 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 385
>gi|340374312|ref|XP_003385682.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Amphimedon
queenslandica]
Length = 466
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 104/171 (60%), Gaps = 6/171 (3%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQ--- 123
+GTEKD++NCPF+ K GACR+GD CSR+H P S TL++ MY + +D
Sbjct: 100 YGTEKDKINCPFFIKTGACRYGDHCSRVHPIPNSSTTLIIRGMYNHVVLTQQLLDEHDED 159
Query: 124 -GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
G +D + + F++FY+D+F E KFGE+ V N H+ GN+YVQ+ EE AA
Sbjct: 160 VGLEMDDEDMLKDFKEFYQDVFPEFEKFGEVVQFKVSCNYESHLRGNLYVQYSTEEACAA 219
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQF--EENNCNRGGYCNFMHV 231
A+ GR+Y+G+ + E+ PV ++ A C +F + + C +G +CNF+HV
Sbjct: 220 AIKQFNGRYYAGKQLSCEYCPVEKWKTAICGEFLKQGSQCPKGKHCNFLHV 270
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P+ SPTLL+ +M+ R D P
Sbjct: 99 EKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 158
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 159 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 215
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 216 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 264
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 105/195 (53%), Gaps = 12/195 (6%)
Query: 46 KDSAVKFAGRGLAM--AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT 103
+ A+ A G A E A + EKDR NCPFY K GACR GDRCSR HN P SPT
Sbjct: 135 RQKALGQAEPGAAWQNPEPPADLRVVEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPT 194
Query: 104 LLLSNMYQ-------RPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECL 156
LL+ +M+ R D P G + + F DFY+D+ E G++
Sbjct: 195 LLIKSMFTTFGMEQCRRDDYDPDA---GLEYSEEETYQQFLDFYDDVLPEFKNVGKVIKF 251
Query: 157 NVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFE 216
V NL H+ GNVYVQ++ EE+ AL GR+Y+GR + EF PVT ++ A C FE
Sbjct: 252 KVSCNLEPHLRGNVYVQYQSEEECQTALSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFE 311
Query: 217 ENNCNRGGYCNFMHV 231
C RG +CNF+HV
Sbjct: 312 IKQCPRGRHCNFLHV 326
>gi|302307163|ref|NP_983740.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|299788867|gb|AAS51564.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|374106953|gb|AEY95861.1| FADL355Wp [Ashbya gossypii FDAG1]
Length = 192
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 114/192 (59%), Gaps = 21/192 (10%)
Query: 82 IGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYE 141
IGACRHGD+CS+ HN P S T+++ NMY P D + D + E FE FYE
Sbjct: 2 IGACRHGDKCSKRHNSPINSYTIVIYNMY------VPPRDYK----DLHALTEDFESFYE 51
Query: 142 DIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
D+F E ++FGE++ L VC+N DH+ GNVY+++ + A AA AL R+Y RP+ +
Sbjct: 52 DVFLEAARFGEVQELIVCENKTDHLNGNVYIRYSTIDAAKAARDALITRWYGERPLYCDL 111
Query: 202 SPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL-FGRYRRRSRSRSFSPIPH 260
S VTDFREA C+ +EE C+RG CNF+H ++IG + N L +++ R H
Sbjct: 112 SHVTDFREAVCKSYEEGTCDRGEQCNFIHRRIIGYHIANGLMLSQWKSR----------H 161
Query: 261 LRSRHRRDGDRD 272
+ +HR D R+
Sbjct: 162 IMPQHRSDEARN 173
>gi|121949800|ref|NP_033479.2| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 isoform 1 [Mus musculus]
gi|162319138|gb|AAI56405.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
gi|225000398|gb|AAI72696.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
Length = 541
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ M+ R D P
Sbjct: 170 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSL 229
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ +I + F DFY D+ E G++ V NL H+ GNVYVQ++ EE A
Sbjct: 230 E---FSEEEIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQA 286
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 287 AFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 335
>gi|431909774|gb|ELK12920.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 461
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 161 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASL 220
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V N+ H+ GNVYVQ++ EE+ A
Sbjct: 221 E---YSEEETYQQFLDFYEDVLPEFRNVGKVVQFKVSCNMEPHLRGNVYVQYQSEEECQA 277
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 278 ARSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 326
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 100/175 (57%), Gaps = 16/175 (9%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV------ 120
GTEKDR NCPFY K G+CR GDRCSR HN PT S TLL+ M+ IT G+
Sbjct: 335 LGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 389
Query: 121 ----DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
DA + D Q+ F +FYED+ E G++ V N H+ GNVYVQ++
Sbjct: 390 DYDTDASLEYSDEETYQQ-FLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQS 448
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
E+ AAL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 449 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 503
>gi|148708819|gb|EDL40766.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 2 [Mus musculus]
Length = 498
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ M+ R D P
Sbjct: 127 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSL 186
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ +I + F DFY D+ E G++ V NL H+ GNVYVQ++ EE A
Sbjct: 187 E---FSEEEIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQA 243
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 244 AFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 292
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 100/175 (57%), Gaps = 16/175 (9%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV------ 120
GTEKDR NCPFY K G+CR GDRCSR HN PT S TLL+ M+ IT G+
Sbjct: 164 IGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 218
Query: 121 ----DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
DA + D Q+ F +FYED+ E G++ V N H+ GNVYVQ++
Sbjct: 219 DYDTDASLEYSDEETYQQ-FLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQT 277
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
E+ AAL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 278 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 332
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 165 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 224
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+
Sbjct: 225 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQTEEECQT 281
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 282 AFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY D+ E G++ V NL H+ GNVYVQ++ EE A
Sbjct: 226 E---YSEEETYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 AFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 331
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P SPTLL+ +M+ R D P
Sbjct: 295 EKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDASL 354
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 355 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQA 411
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 412 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 460
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN P SPTLL+ +M+ R D P
Sbjct: 164 EKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDASL 223
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+
Sbjct: 224 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQT 280
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 281 ALSLFNGRWYAGRQLQCEFCPVTQWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|2842648|sp|Q62377.1|U2AFM_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|927659|dbj|BAA08143.1| U2af1-rs2 [Mus musculus]
Length = 462
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ M+ R D P
Sbjct: 170 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSL 229
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ +I + F DFY D+ E G++ V NL H+ GNVYVQ++ EE A
Sbjct: 230 E---FSEEEIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQA 286
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 287 AFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 335
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 119/224 (53%), Gaps = 15/224 (6%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-----GVD 121
FGTE+D NCPF+ K GACR GDRCSR H PT SPTL++ M++ M +D
Sbjct: 169 FGTERDVANCPFFLKTGACRFGDRCSRKHTYPTTSPTLMIRGMFRTFGMEESRRDDYDID 228
Query: 122 AQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAA 181
A + + ++QE F +FY D+ E G++ V N H+ GNVYVQF EEQ
Sbjct: 229 ACLEHSE-EEMQESFLEFYHDVLPEFKSVGKVLQFKVSCNYEPHLRGNVYVQFDTEEQCK 287
Query: 182 AALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNK 241
A GR+Y+GR + E SPVT ++ A C F+ + C +G +CNF+HV RN
Sbjct: 288 EAFIKFNGRWYAGRQLHCEISPVTRWKNAICGLFDRHRCPKGKHCNFLHV------FRNP 341
Query: 242 LFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERS 285
+ R SP +R H RDG RS+R R Y RS
Sbjct: 342 -GNEFWEADRDLHMSPDRSVRGSH-RDGWYS-SRSWRQRHYSRS 382
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT S TLL+ +M+ R D P DA
Sbjct: 186 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSSTLLIRSMFTTFGMEQCRRDDYDP--DA 243
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ D Q+ F DFY D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 244 SLEYSDEETYQQ-FLDFYHDVVPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECHA 302
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 303 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 351
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 214 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSL 273
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY D+ E G++ V NL H+ GNVYVQ++ EE A
Sbjct: 274 E---YSEEETYQQFLDFYHDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEDCQA 330
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 331 AFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 379
>gi|395751008|ref|XP_003780722.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Pongo abelii]
Length = 179
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
Query: 100 ISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNV 158
+ T++L N+Y+ P D + ++QEH+++F+E++F EL K+GE E +NV
Sbjct: 1 MPQTIVLLNLYRNPQNTAQTADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEXEEMNV 60
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEEN 218
CDNL DH++GNVYV+FR EE A A+ L R+++G+ + E SPVTDFRE+ CRQ+E
Sbjct: 61 CDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMG 120
Query: 219 NCNRGGYCNFMHVKLIGRDLRNKLF 243
C RGG+CNFMH++ I ++LR +L+
Sbjct: 121 ECTRGGFCNFMHLRPISQNLRRQLY 145
>gi|401414385|ref|XP_003871690.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487909|emb|CBZ23153.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD+C++LH RP SPT+L MY P I D + +D + +++
Sbjct: 8 CAFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNPHAIAHIKDREWTFELDKKYLKK 67
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++++ +FG I L V NL DH++GNVY++F + + A + L+G+ +
Sbjct: 68 HFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKKLND 127
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
++ E SPVT+F EA C++ EN C RG CN++H+ + R L KL
Sbjct: 128 VIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 165 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASL 224
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V N H+ GNVYVQ++ EE+
Sbjct: 225 E---YSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNWEPHLRGNVYVQYQTEEECQT 281
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 282 AFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRC R HN P+ SPTLL+ +M+ R D P
Sbjct: 166 EKDRANCPFYGKTGACRFGDRCLRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V N H+ GNVYVQ++ EE+ A
Sbjct: 226 E---YSEEETYQQFLDFYDDVLPEFRSVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQA 282
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 283 ALSLFNGRWYAGRQLRCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 119/225 (52%), Gaps = 24/225 (10%)
Query: 68 GTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV------- 120
TEKD+ NCPFY K G+CR GDRCSR HN PT S TLL+ +M+ IT G+
Sbjct: 163 ATEKDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMF-----ITFGMEQCRRDD 217
Query: 121 ---DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
DA + + Q+ F DFYED+ E G++ V N H+ GNVYVQ++ E
Sbjct: 218 YDTDASLEYSEEETYQQ-FLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSE 276
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRD 237
E+ AA GR+Y+GR + EFSPVT ++ A C F C RG +CNF+HV R+
Sbjct: 277 EECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHV---FRN 333
Query: 238 LRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDY 282
N+ + R S ++ +S RRD R SY + Y
Sbjct: 334 PNNEFWEANRDIHMSPDWANTSFGKSSERRD-----RTSYHEEYY 373
>gi|297745616|emb|CBI40781.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 79/118 (66%), Gaps = 34/118 (28%)
Query: 55 RGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPD 114
+G +MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ
Sbjct: 7 QGASMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ--- 63
Query: 115 MITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYV 172
+L KFGEIE LNVCDNLADHMIG V +
Sbjct: 64 -------------------------------QLGKFGEIESLNVCDNLADHMIGAVLL 90
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 129/254 (50%), Gaps = 17/254 (6%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR +CPFY K GACR GD+CSR H+ P SPTLL+ +M+ R D P
Sbjct: 137 EKDRAHCPFYIKTGACRFGDKCSRKHSFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASL 196
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFY+D+ E G++ V NL H+ GNVYVQ++ EE+ A
Sbjct: 197 E---YSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQA 253
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV-----KLIGRD 237
AL GR+Y+GR + E PVT ++ A C FE C RG +CNF+HV G
Sbjct: 254 ALSLFNGRWYAGRQLQCEICPVTQWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFGEA 313
Query: 238 LRNKL-FGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSY-RDRDYERSRRTHSRSSTS 295
+R+ F S ++ + L SR RR RSY RD + ER RR R S
Sbjct: 314 IRDIYPFPDPTGSSFGKNAERLERLGSRLRRRWSPRPSRSYKRDGEGERGRRVSHRRSHK 373
Query: 296 SRSRTPVREGSEER 309
RS+ R S+ R
Sbjct: 374 HRSKIQERHSSQSR 387
>gi|449682646|ref|XP_002156010.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Hydra
magnipapillata]
Length = 190
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 20/174 (11%)
Query: 109 MYQRPDMITP----GVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLA 163
M+Q P + G ++ + QEH+++F+ED+F EL +K+GEIE +NVCDNL
Sbjct: 1 MFQNPQNLAVTNEFGQSNAASIMNDVEAQEHYDNFFEDVFLELEAKYGEIEEMNVCDNLG 60
Query: 164 DHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRG 223
DH++GNVYV+FR EE A A+ + R+Y+G+PI E SPVTDFRE+ CRQ+E C RG
Sbjct: 61 DHLVGNVYVKFRFEEDAEKAVDNVNNRWYNGQPIYAELSPVTDFRESCCRQYEMGECTRG 120
Query: 224 GYCNFMHVKLIGRDLRNKLFGRYR---------------RRSRSRSFSPIPHLR 262
G+CNFMH+K I R+LR +L+GR R +R RSRS SP P ++
Sbjct: 121 GFCNFMHLKPISRELRRRLYGRRRGGAGVGGGAASGPMVKRGRSRSISPSPPIK 174
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 100/174 (57%), Gaps = 16/174 (9%)
Query: 68 GTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV------- 120
TEKD+ NCPFY K G+CR GDRCSR HN PT S TLL+ +M+ IT G+
Sbjct: 164 ATEKDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMF-----ITFGMEQCRRDD 218
Query: 121 ---DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
DA + + Q+ F DFYED+ E G++ V N H+ GNVYVQ++ E
Sbjct: 219 YDTDASLEYSEEETYQQ-FLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSE 277
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
E+ AA GR+Y+GR + EFSPVT ++ A C F C RG +CNF+HV
Sbjct: 278 EECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHV 331
>gi|355727231|gb|AES09126.1| U2 small nuclear RNA auxiliary factor 1 [Mustela putorius furo]
Length = 133
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+
Sbjct: 1 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 60
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+G
Sbjct: 61 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 120
>gi|431899712|gb|ELK07664.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 449
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKD NCPFY K GACR G+RCSR HN PT SPTLL+ +M+ R D P
Sbjct: 149 EKDPANCPFYNKTGACRFGNRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASL 208
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F DFYED+ E G++ V NL H+ GNVYVQ++ +E+ A
Sbjct: 209 E---YSEEETYQQFLDFYEDVLPEFRNVGKVVQFKVSCNLEPHLRGNVYVQYQSKEECQA 265
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 266 ALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 314
>gi|154331585|ref|XP_001561610.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058929|emb|CAM36756.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Query: 69 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PI 127
T DR C F+ ++GACRHGD+C++LH RP SPT+L MY P I D + +
Sbjct: 3 THVDR--CVFFSRMGACRHGDQCTKLHYRPDTSPTVLFPMMYPNPHAIVHIKDREWNFEL 60
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHAL 187
D + +++HFE FY++++ +FG I L V NL DH++GNVY++F + + A+ ++ L
Sbjct: 61 DKKYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVASRIVNEL 120
Query: 188 QGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
+G+ + ++ E SPVT+F EA C++ E+ C RG CN++H+ + R L KL
Sbjct: 121 RGKKLNAVIVLPELSPVTNFAEACCKEDLESRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|389592512|ref|XP_003721697.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
gi|321438230|emb|CBZ11982.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
Length = 210
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD+C++LH RP SPT+L MY P I D + +D + +++
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNPHAIEHIKDREWNFELDKKYLKK 67
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++++ +FG I L V NL DH++GNVY++F + + A + L+G+ +
Sbjct: 68 HFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKKLND 127
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
++ E SPVT+F EA C++ EN C RG CN++H+ + R L KL
Sbjct: 128 IIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|344288487|ref|XP_003415981.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 489
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 97/171 (56%), Gaps = 12/171 (7%)
Query: 69 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPID 128
TEKDR CPFY K GACR GDRCSR H+ P SPTLL+ +M+ M +D D
Sbjct: 151 TEKDRAYCPFYSKTGACRFGDRCSRKHSFPASSPTLLIKSMFTTFGMEQSRMD----DYD 206
Query: 129 P--------RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQA 180
P + + F +FY+D+ E G++ V N H+ GNVYVQ++ EE+
Sbjct: 207 PDASLEYSEEETYQQFLEFYDDVLPEFKNVGKVIQFKVSCNSEPHLRGNVYVQYQSEEEC 266
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AA GR+Y+GR + EF PVT ++ A CR FE C RG +CNF+HV
Sbjct: 267 QAAHSLFNGRWYAGRQLQCEFCPVTRWQMAICRVFETQQCPRGKHCNFLHV 317
>gi|332263383|ref|XP_003280726.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Nomascus
leucogenys]
gi|332872231|ref|XP_003319153.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Pan
troglodytes]
gi|397506809|ref|XP_003823909.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
paniscus]
Length = 202
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ ++QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+
Sbjct: 30 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 89
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
L R+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 90 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 148
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR CPFY K GACR GDRCSR H+ PT SPTLL+ +M+ R D P
Sbjct: 215 EKDRAYCPFYSKTGACRFGDRCSRKHSFPTSSPTLLIKSMFTTFGMEQCRMDDYDPDASL 274
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ + + F +FY+D+ E G++ V N H+ GNVYVQ++ EE+ A
Sbjct: 275 E---YSEEETYQQFLEFYDDVLPEFRNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQA 331
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 332 ALSVFNGRWYAGRQLQCEFCPVTRWQMAICGLFETQQCPRGKHCNFLHV 380
>gi|255730573|ref|XP_002550211.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
gi|240132168|gb|EER31726.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
Length = 293
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 114/214 (53%), Gaps = 41/214 (19%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP------------DMITP 118
++ V C FY +IGACRHG+ CS+ H RP S T++L+N+YQ P + + P
Sbjct: 30 ENLVVCLFYTRIGACRHGENCSKKHIRPNSSNTIMLANLYQNPKVKKSNNTDNGSEQLIP 89
Query: 119 GVDA---------------------------QGQPIDP--RKIQEHFEDFYEDIFEELSK 149
++ + +DP +IQE+F+ FY D+F +S+
Sbjct: 90 ASESGKTEVEMANEEEPQEDKEEKSQQQKEVEESEVDPTEEEIQEYFDQFYADVFVHISQ 149
Query: 150 FGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFRE 209
I L+VC+N DH+ GNVYVQF EE A L +++ RP+ E SPV+DF E
Sbjct: 150 MRPIYKLSVCENQNDHLNGNVYVQFFSEEDAGFVNRQLNSEWFNERPVYSELSPVSDFEE 209
Query: 210 ATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
A CR ++ C+RGG CN+MHV+ +L ++LF
Sbjct: 210 AHCRAYDNGGCDRGGRCNYMHVRQPTEELFDELF 243
>gi|407410372|gb|EKF32829.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
gi|407410375|gb|EKF32830.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
Length = 233
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 11/216 (5%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD C+++H RPT SPT+L MY P I D Q + D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWEFHFDRKYLKR 65
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++ + + G I L V NL DH++GNVY++F E +A+ L+ + +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAAEASHIARELKAKKLNE 125
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSRSRS 254
++ E SPVT+F +A C++ E C RG CN++H+ + R L KL + +++
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKL-----EKEQAKY 180
Query: 255 FSPIPHLRSRHRRDGDRDYRRSY-RDRDYERSRRTH 289
+ + +H R GDR RS R RD RS R H
Sbjct: 181 WKK----KEKHSRGGDRKRERSKDRGRDRSRSPRPH 212
>gi|146075783|ref|XP_001462772.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|398009570|ref|XP_003857984.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
gi|134066852|emb|CAM59993.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|322496188|emb|CBZ31259.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
Length = 210
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD+C++LH RP SPT+L MY P + D + +D + +++
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNPHAVEHIKDREWNFELDRKYLKK 67
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++++ +FG I L V NL DH++GNVY++F + + A + L+G+ +
Sbjct: 68 HFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKKLND 127
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
++ E SPVT+F EA C++ EN C RG CN++H+ + R L KL
Sbjct: 128 IIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|359392832|gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 11/206 (5%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASI------FGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q A L+ E L + FGTE+D+ +CPF+ K GACR
Sbjct: 213 DRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRF 272
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEEL 147
G RCSR+H P S TLL+ NMY P + +G +I++ +E+FYED+ E
Sbjct: 273 GLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLEFTDEEIEQSYEEFYEDVHTEF 330
Query: 148 SKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
KFGE+ VC N + H+ GNVYV ++ + A A ++ GR+++G+ I EF VT +
Sbjct: 331 LKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRW 390
Query: 208 REATCRQFEEN---NCNRGGYCNFMH 230
+ A C ++ + C+ G CNF+H
Sbjct: 391 KAAICGEYMRSRYKTCSHGVACNFIH 416
>gi|363543273|ref|NP_001241852.1| RGH3 splicing factor [Zea mays]
gi|330470888|gb|AEC32092.1| RGH3 splicing factor [Zea mays]
gi|356609668|gb|AET25330.1| RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha isoform [Zea mays]
Length = 755
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 11/206 (5%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASI------FGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q A L+ E L + FGTE+D+ +CPF+ K GACR
Sbjct: 178 DRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRF 237
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEEL 147
G RCSR+H P S TLL+ NMY P + +G +I++ +E+FYED+ E
Sbjct: 238 GLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLEFTDEEIEQSYEEFYEDVHTEF 295
Query: 148 SKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
KFGE+ VC N + H+ GNVYV ++ + A A ++ GR+++G+ I EF VT +
Sbjct: 296 LKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRW 355
Query: 208 REATCRQFEEN---NCNRGGYCNFMH 230
+ A C ++ + C+ G CNF+H
Sbjct: 356 KAAICGEYMRSRYKTCSHGVACNFIH 381
>gi|380793475|gb|AFE68613.1| splicing factor U2AF 35 kDa subunit isoform a, partial [Macaca
mulatta]
Length = 155
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Query: 132 IQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|342184023|emb|CCC93504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 234
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 121/219 (55%), Gaps = 14/219 (6%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD C+++H RPT SPT+L MY P I D + D R +++
Sbjct: 6 CIFFSKMGACRHGDNCTKIHVRPTSSPTVLFPLMYPNPAAIEHIQDREWDFHFDRRYLRQ 65
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++ + + G I L V NL DH++GNVY++F + +A + L+ + +
Sbjct: 66 HFERFYKETWRTFMELGHIAELRVVSNLGDHLLGNVYIRFEDSHEALRVVRELKAKKLNN 125
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL---FGRYRRRSR 251
++ E SPVT+F +A C++ E NC RG CN++H+ + R L KL +YR++
Sbjct: 126 IVLLPELSPVTNFADACCKEDLEGNCERGSQCNYLHIMKVSRKLMEKLEKEQAKYRKKKD 185
Query: 252 SRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHS 290
S S S +R+ +D R RD ++S R H
Sbjct: 186 KHSGST-----SSRKRERSKD-----RGRDRQKSPRAHG 214
>gi|68800138|ref|NP_001020375.1| splicing factor U2AF 35 kDa subunit isoform c [Homo sapiens]
gi|194226294|ref|XP_001490926.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Equus caballus]
gi|332263381|ref|XP_003280725.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Nomascus
leucogenys]
gi|332872229|ref|XP_003319152.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
troglodytes]
gi|338720813|ref|XP_003364254.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Equus caballus]
gi|345795464|ref|XP_535599.3| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Canis
lupus familiaris]
gi|359323577|ref|XP_003640136.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Canis
lupus familiaris]
gi|397506805|ref|XP_003823907.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
paniscus]
gi|397506807|ref|XP_003823908.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
paniscus]
gi|403271413|ref|XP_003927619.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Saimiri boliviensis
boliviensis]
gi|410969865|ref|XP_003991412.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Felis
catus]
gi|410969867|ref|XP_003991413.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Felis
catus]
gi|441672637|ref|XP_004092374.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
gi|33341702|gb|AAQ15222.1|AF370386_1 FP793 [Homo sapiens]
gi|119629906|gb|EAX09501.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629909|gb|EAX09504.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629910|gb|EAX09505.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
Length = 167
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Query: 132 IQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+FR EE A A+ L R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|302502949|ref|XP_003013435.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|302652540|ref|XP_003018117.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
gi|291176999|gb|EFE32795.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|291181728|gb|EFE37472.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
Length = 180
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 115/210 (54%), Gaps = 44/210 (20%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MA +LASIFGTE+D+ T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDK-----------------------------TILLPNLYQNPQY--- 28
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
D + + ++P ++Q HF+ FYED + E+ K+GEIE + VC+N DH+IGNVY +F+ E+
Sbjct: 29 --DPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYED 85
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K +L
Sbjct: 86 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEL 145
Query: 239 RNKL------FGRYR---RRSRSRSFSPIP 259
+L + R R RS +RS SP P
Sbjct: 146 DRELELSTKKWLRLRGRDERSVTRSPSPEP 175
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY--------QRPDMITP 118
+GTEKD+ NCPF+ K GACR GDRCSR H+ P S TL++ M+ +R D T
Sbjct: 176 YGTEKDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFGMEQSRRDDYDT- 234
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
DA + ++ + F DFYED E G + V N H+ GNVYVQ+ EE
Sbjct: 235 --DASLE-YSEEELHQQFLDFYEDALPEFKNAGRVVQFKVSCNFEPHLRGNVYVQYETEE 291
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
Q A GR+Y+GR + EFSPVT ++ A C F+ C +G +CNF+HV
Sbjct: 292 QCKEAFVMFNGRWYAGRQLQCEFSPVTRWKTAICGLFDRRKCPKGKHCNFLHV 344
>gi|449432946|ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 212 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWE--QDEGLE 269
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
+++ +E+FY+D+ E K+GEI VC N + H+ GN+YV ++ + A A +A
Sbjct: 270 FTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNA 329
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
GRFY+G+ II EF VT ++ A C +F + C+ G CNF+H
Sbjct: 330 NNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|449478305|ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Cucumis sativus]
Length = 838
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 212 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWE--QDEGLE 269
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
+++ +E+FY+D+ E K+GEI VC N + H+ GN+YV ++ + A A +A
Sbjct: 270 FTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNA 329
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
GRFY+G+ II EF VT ++ A C +F + C+ G CNF+H
Sbjct: 330 NNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|225465261|ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 128/234 (54%), Gaps = 16/234 (6%)
Query: 11 KERKKKKKRFLREGKREEVCVWIDKLSEI------PFPSQ-----DKDSAVKFAGRGLAM 59
K+R + K+ + + R+EV + + +L + P P Q D ++++ + + A
Sbjct: 130 KKRVRIAKKDVDQHSRKEVLLRLFQLYDTERPTSNPLPPQSEAFSDHNASIISSQQLFAD 189
Query: 60 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPG 119
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 190 VSEQIPNFGTEQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWE- 248
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
+G +++ +E+FYED+ E KFGEI VC N + H+ GNVYV ++ +
Sbjct: 249 -QDEGLEYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDS 307
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
A A H++ G +Y+G+ + EF VT ++ A C ++ ++ C+ G CNF+H
Sbjct: 308 AVLAYHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIH 361
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 167 FGTEQDKAHCPFHLKTGACRFGIRCSRVHFYPDKSSTLLIKNMYSGPGLACDQDQDEGLE 226
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
+++ FE+FYED+ E KFGEI VC N + H+ GNVYVQ++ + A A +
Sbjct: 227 YTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNT 286
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+ GR+++G+ + +F +T ++ A C ++ ++ C+ G CNF+H
Sbjct: 287 VNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTTCNFIH 333
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
FGTE+D+ +CPFY K ACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 203 FGTEQDKAHCPFYLKTAACRFGVRCSRVHFYPDKSCTLLMKNMYNGPGLALE--QDEGLE 260
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
++++ +E+FYED+ E KFGE+ VC N + H+ GNVYV ++ + A A ++
Sbjct: 261 FTDEEVEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYNS 320
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+ GR+++G+ I EF VT ++ A C ++ + C+ G CNF+H
Sbjct: 321 MNGRYFAGKQITCEFVAVTKWKAAICGEYMRSRFKTCSHGVACNFIH 367
>gi|449680951|ref|XP_002158120.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Hydra
magnipapillata]
Length = 403
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Query: 64 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQ 123
+ +FGTE D NC FY K GACR G RCSR+H + SPT+L+ N + + P ++ +
Sbjct: 44 SDMFGTEMDPRNCKFYIKTGACRFGPRCSRIHLKFDNSPTILIQNFFTDARLAIPMLNER 103
Query: 124 ----GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
G D + FE FY+D+ E G + C N H+ GNVYVQ+++
Sbjct: 104 NNDFGLEYDEVDLIHEFEKFYDDVIGEFRAAGTVVMFKCCQNYVPHLRGNVYVQYQDHNG 163
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A AL GR+Y+GR + VE SPVT+++ + C F++ C RG CNF+HV
Sbjct: 164 ALRALKMFNGRWYAGRQLSVELSPVTNWKSSICGLFDKRLCPRGKACNFLHV 215
>gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus]
Length = 428
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 118/223 (52%), Gaps = 14/223 (6%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-----GVDAQG 124
EK R +CPFY K GACR G+RCSR H+ PT SPTLL+ +M+ M DA
Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 216
Query: 125 QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ + Q+ F DFY D+ E G++ V NL H+ GNVYVQ++ EE+ AAL
Sbjct: 217 EYSEEETYQQ-FLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 275
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
GR+Y+GR + EF PVT ++ A C FE C +G +CNF+HV RN
Sbjct: 276 SLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV------FRNP-NN 328
Query: 245 RYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRR 287
+R +R SP P ++ DR R+ + + Y +SR
Sbjct: 329 EFREANRDIYMSP-PAWTGSSGKNSDRRERKDHHEEYYSKSRS 370
>gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Mus musculus]
gi|2842676|sp|Q64707.1|U2AFL_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=SP2; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
1
gi|12044258|gb|AAG47771.1|AF309654_1 U2AF small subunit-related protein [Mus musculus]
gi|544778|gb|AAB29564.1| SP2=U2 small nuclear ribonucleoprotein auxiliary factor small
subunit homolog [mice, brain, Peptide, 428 aa]
gi|575893|dbj|BAA04230.1| SP2 [Mus musculus]
gi|1468962|dbj|BAA05486.1| U2AF small subunit-related protein [Mus musculus]
gi|22255349|dbj|BAC07536.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) related
protein [Mus musculus]
gi|124376102|gb|AAI32556.1| Zrsr1 protein [Mus musculus]
gi|148675928|gb|EDL07875.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 1 [Mus musculus]
gi|223460302|gb|AAI38595.1| Zrsr1 protein [Mus musculus]
Length = 428
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 118/223 (52%), Gaps = 14/223 (6%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-----GVDAQG 124
EK R +CPFY K GACR G+RCSR H+ PT SPTLL+ +M+ M DA
Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 216
Query: 125 QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ + Q+ F DFY D+ E G++ V NL H+ GNVYVQ++ EE+ AAL
Sbjct: 217 EYSEEETYQQ-FLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 275
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
GR+Y+GR + EF PVT ++ A C FE C +G +CNF+HV RN
Sbjct: 276 SLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV------FRNP-NN 328
Query: 245 RYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRR 287
+R +R SP P ++ DR R+ + + Y +SR
Sbjct: 329 EFREANRDIYMSP-PAWTGSSGKNSDRRERKDHHEEYYSKSRS 370
>gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus]
Length = 428
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 117/223 (52%), Gaps = 14/223 (6%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-----GVDAQG 124
EK R +CPFY K GACR G+RCSR H+ PT SPTLL+ +M+ M DA
Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 216
Query: 125 QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ + Q+ F DFY D+ E G++ V NL H+ GNVYVQ++ EE+ AAL
Sbjct: 217 EYSEEETYQQ-FLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 275
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
GR+Y+GR + EF PVT ++ A C FE C +G +CNF+HV RN
Sbjct: 276 SLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV------FRNP-NN 328
Query: 245 RYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRR 287
+R +R SP P + DR R+ + + Y +SR
Sbjct: 329 EFREANRDIYMSP-PAWTGSSGKSSDRRERKDHHEEYYSKSRS 370
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
+GTE+D NCPF+ K GACR G+RCSR H PT SPTL++ M+ M D
Sbjct: 168 YGTERDVANCPFFLKTGACRFGERCSRKHVYPTSSPTLMIRGMFMTFGMEQLRRDDYDMD 227
Query: 127 I----DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
+ E F +FY D+ E G++ VC N H+ GNVY+QF ++Q
Sbjct: 228 ACLEHSEEDLHESFLEFYHDVLPEFKSVGKVVQFKVCCNYEPHLKGNVYIQFETDDQCKE 287
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AL GR+Y+GR + E SPVT ++ A C F+ C +G +CNF+HV
Sbjct: 288 ALMKFNGRWYAGRQLQCEISPVTRWKNAICGLFDRRKCPKGKHCNFLHV 336
>gi|15218489|ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 9/204 (4%)
Query: 34 DKLSEIPFPSQDKDSA----VKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGD 89
D+ + P P + SA V A + L FGTE+D+ +CPF+ K GACR G
Sbjct: 200 DRPTSNPLPPGSEASANYQNVSSAQQILESVAQEVPNFGTEQDKAHCPFHLKTGACRFGQ 259
Query: 90 RCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSK 149
RCSR+H P S TLL+ NMY P IT D +G + + +E+FYED+ E K
Sbjct: 260 RCSRVHFYPNKSCTLLMKNMYNGPG-ITWEQD-EGLEYTDEEAELCYEEFYEDVHTEFLK 317
Query: 150 FGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFRE 209
+GE+ VC N + H+ GNVYV +R E A A ++ GR+++G+ + EF ++ ++
Sbjct: 318 YGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKV 377
Query: 210 ATCRQFEEN---NCNRGGYCNFMH 230
A C ++ ++ C+RG CNF+H
Sbjct: 378 AICGEYMKSRLKTCSRGSACNFIH 401
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 126/247 (51%), Gaps = 24/247 (9%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-----GVD 121
+GTE+D NCPF+ K G+CR GDRCSR H PT SPT+++ +M++ M +D
Sbjct: 165 YGTERDVSNCPFFLKTGSCRFGDRCSRKHVYPTASPTMMIRSMFKTFGMEEARRDDYDID 224
Query: 122 AQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAA 181
A + + ++ E F +FY D+ E G++ V N H+ GNVYVQF EEQ
Sbjct: 225 ACLEHSE-EELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFETEEQCK 283
Query: 182 AALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNK 241
A GR+Y+GR + E PVT ++ A C F+ C +G +CNF+HV RN
Sbjct: 284 EAFIKFNGRWYAGRQLHCEMCPVTRWKNAICGLFDRQKCPKGKHCNFLHV------FRNP 337
Query: 242 LFGRYRRRSRSRSFSPIPHLRSRHR------RDGDRDYRRSYRDRDYERSRRTHSRSST- 294
+ R SP +R R R GDR RR R RS R+HSR +
Sbjct: 338 -GKEFWEADRDLHMSPDRSVRGSQRDGRHSERYGDRWQRRC--SRSPPRSERSHSRRAGD 394
Query: 295 --SSRSR 299
SSRSR
Sbjct: 395 RWSSRSR 401
>gi|255573856|ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 857
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 11/206 (5%)
Query: 34 DKLSEIPFPSQD------KDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q + + + A R L FGTE+D+ +CPF+ K GACR
Sbjct: 173 DRPTSNPLPPQSEAFAEYQKAPMPSAERMLENVAQQIPNFGTEQDKAHCPFHLKTGACRF 232
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEEL 147
G RCSR+H P + TLL+ NMY P + +G +++ +E+FYED+ E
Sbjct: 233 GQRCSRVHFYPDKANTLLMKNMYNGPGLAWE--QDEGLEHTDEEVERSYEEFYEDVHTEF 290
Query: 148 SKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
K+GEI VC N + H+ GNVYVQ++ + A A ++ GR+++G+ + EF VT +
Sbjct: 291 LKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYCSINGRYFAGKQVNCEFVNVTRW 350
Query: 208 REATCRQFEENN---CNRGGYCNFMH 230
+ A C ++ ++ C+RG CNF+H
Sbjct: 351 KVAICGEYMKSRLQMCSRGTACNFIH 376
>gi|71399405|ref|XP_802775.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|71657119|ref|XP_817079.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|70864869|gb|EAN81329.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
gi|70882249|gb|EAN95228.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD C+++H RPT SPT+L MY P I D Q D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWDFHFDRKYLKR 65
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++ + + G I L V NL DH++GNVY++F E A+ L+ + +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARELKAKKLNE 125
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSRSRS 254
++ E SPVT+F +A C++ E C RG CN++H+ + R L KL + +++
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKL-----EKEQAKY 180
Query: 255 FSPIPHLRSRHRRDGDRDYRRSYRDRDYERSR 286
+ + +H R DR RS +DR ERSR
Sbjct: 181 WKK----KEKHSRGSDRKRERS-KDRGRERSR 207
>gi|407849824|gb|EKG04420.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD C+++H RPT SPT+L MY P I D Q D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWDFHFDRKYLKR 65
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++ + + G I L V NL DH++GNVY++F E A+ L+ + +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARELKAKKLNE 125
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSRSRS 254
++ E SPVT+F +A C++ E C RG CN++H+ + R L KL + +++
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKL-----EKEQAKY 180
Query: 255 FSPIPHLRSRHRRDGDRDYRRSYRDRDYERSR 286
+ + +H R DR RS +DR ERSR
Sbjct: 181 WKK----KEKHSRVSDRKRERS-KDRGRERSR 207
>gi|62945360|ref|NP_001017504.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Rattus norvegicus]
gi|55778495|gb|AAH86322.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
1 [Rattus norvegicus]
Length = 428
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 116/220 (52%), Gaps = 15/220 (6%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-----GVDAQG 124
EK R +CPFY K GACR G+RCSR H+ PT SPTLL+ +M+ M DA
Sbjct: 158 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 217
Query: 125 QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ + Q+ F DFY D+ E G++ V NL H+ GNVYVQ++ EE+ AAL
Sbjct: 218 EYSEEETYQQ-FLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 276
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
GR+Y+GR + EF PVT ++ A C FE C +G +CNF+HV R+ N+
Sbjct: 277 SLFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV---FRNPNNEF-- 331
Query: 245 RYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYER 284
R +R P ++ DR R+ +R+ Y +
Sbjct: 332 ----RDANRDIYLPPASTGSSGKNSDRGDRKDHREESYSK 367
>gi|290993180|ref|XP_002679211.1| predicted protein [Naegleria gruberi]
gi|284092827|gb|EFC46467.1| predicted protein [Naegleria gruberi]
Length = 189
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 105/177 (59%), Gaps = 8/177 (4%)
Query: 75 NCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQG--QPIDPRKI 132
C FY+KIGACR GDRCS LH +P S T+++ +MY P VD G +P I
Sbjct: 6 TCTFYWKIGACRLGDRCSHLHQKPAYSQTIMIRHMYPNPKG-AHFVDENGILRPFSQEFI 64
Query: 133 QEHFEDFYEDIFEEL-SKFG-EIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+E FE+FY DIF+EL +K G +IE L +CDN +HM GNVY+ A L+G+
Sbjct: 65 KEWFENFYADIFKELETKNGIKIEDLYICDNTCEHMFGNVYISLASIPDAQKCYELLKGK 124
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFE---ENNCNRGGYCNFMHVKLIGRDLRNKLFG 244
+++GR + E+SPV DF EA C+ F+ E +C +G CN +HV +L LFG
Sbjct: 125 YHAGRLLTPEYSPVLDFSEAKCKLFDRGGEEHCPKGANCNNLHVLRPSEELAKHLFG 181
>gi|31455228|gb|AAH05915.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|312151474|gb|ADQ32249.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
Length = 167
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 132 IQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+QEH+++F+E++F E+ K+ E+E +NVCDNL DH++GNVYV+FR EE A A+ L R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYREVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
+++G+PI E SPVTDFREA CRQ+E C RGG+CNFMH+K I R+LR +L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|354479997|ref|XP_003502195.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Cricetulus griseus]
gi|344244263|gb|EGW00367.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Cricetulus griseus]
Length = 427
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP-----GVDAQG 124
EK R +CPFY K GACR G+RCSR H+ PT SPTLL+ +M+ M DA
Sbjct: 156 EKYRASCPFYSKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDASL 215
Query: 125 QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ + Q+ F DFY D+ E G++ V NL H+ GNVYVQ++ EE+ AAL
Sbjct: 216 EYSEEETYQQ-FLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 274
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
GR+Y+GR + EF PVT ++ A C +E C +G +CNF+HV
Sbjct: 275 SLFNGRWYAGRQLQCEFCPVTRWKIAICGLYEMQKCPKGKHCNFLHV 321
>gi|21616732|gb|AAM66350.1|AF499017_1 U2 splicing auxiliary factor [Trypanosoma cruzi]
Length = 233
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 11/212 (5%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQ-PIDPRKIQE 134
C F+ K+GACRHGD C+++H R T SPT+L MY P I D Q D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRSTSSPTVLFLMMYPNPMAIEHIQDRQWDFHFDRKYLKR 65
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++ + + G I L V NL DH++GNVY++F E A+ L+ + +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARELKAKKLNE 125
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSRSRS 254
++ E SPVT+F +A C++ E C RG CN++H+ + R L KL + +++
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIVKVSRKLMEKL-----EKEQAKY 180
Query: 255 FSPIPHLRSRHRRDGDRDYRRSYRDRDYERSR 286
+ + +H R DR RS +DR ERSR
Sbjct: 181 WKK----KEKHSRGSDRKRERS-KDRGRERSR 207
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 27/218 (12%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGR----GLAMAEHLASI------FGTEK--------DRVN 75
D+ + P P Q +V FA + L+ E L + FGTE+ D+ +
Sbjct: 166 DRPTSNPLPPQ----SVAFASQRMEPSLSAQEVLEKVAQETPNFGTEQASSMILFQDKAH 221
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G +I++
Sbjct: 222 CPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALE--QDEGLECTDEEIEQS 279
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
+E+FYED+ E KFGE+ VC N + H+ GNVYV ++ + A A ++ GR+++G+
Sbjct: 280 YEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGRYFAGK 339
Query: 196 PIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
I EF VT ++ A C ++ + C+RG CNF+H
Sbjct: 340 QITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 377
>gi|196002924|ref|XP_002111329.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
gi|190585228|gb|EDV25296.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
Length = 462
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 120/248 (48%), Gaps = 18/248 (7%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQ----GQPIDPRK 131
CPF+ K G CR GDRCSRLH P S LL+ NM+ + D Q
Sbjct: 147 CPFFNKTGVCRFGDRCSRLHVHPESSRVLLIPNMFTSIGLSEGLQDEQEFDTNLEYSEND 206
Query: 132 IQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
++ F +FY DI+ E GEI +C N H+ GNVYV+++ EE+ A GR+
Sbjct: 207 LRSQFIEFYNDIYPEFQAAGEIREFKICCNYEPHLRGNVYVEYQSEEECHKAFRMFHGRW 266
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV--KLIGRDLRNKLFGRYRRR 249
Y+ R + +FSPV +++ A C F + C +G +CNF+HV + + R+ R+RR
Sbjct: 267 YAQRQLFCQFSPVNNWKSAICGLFRQKRCPKGKHCNFLHVFENPVAQSTRSAFNDRHRRH 326
Query: 250 SRS-----RSFSPIPHLRS---RHRRDGDRDYRRSYRD----RDYERSRRTHSRSSTSSR 297
S + R + I + S RHR DR R + D RD R + S R
Sbjct: 327 SFNNNRSVRDYGKIENRSSRSDRHRNHDDRVRRSDWHDRHNRRDRSRDNDNYRHEKRSKR 386
Query: 298 SRTPVREG 305
SR+P +
Sbjct: 387 SRSPTHDS 394
>gi|297849356|ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338401|gb|EFH68818.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
Length = 772
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 111/204 (54%), Gaps = 9/204 (4%)
Query: 34 DKLSEIPFPSQDKDSA----VKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGD 89
D+ + P P + A V A + L FGTE+D+ +CPF+ K GACR G
Sbjct: 200 DRPTSNPLPPGSEACANYQNVSSAQQILESVSQEVPNFGTEQDKAHCPFHLKTGACRFGP 259
Query: 90 RCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSK 149
RCSR+H P S TLL+ NMY P + +G + + +E+FYED+ E K
Sbjct: 260 RCSRVHFYPNKSCTLLMKNMYNGPGIAWE--QDEGLEYTDEEAEHCYEEFYEDVHTEFLK 317
Query: 150 FGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFRE 209
+GE+ VC N + H+ GNVYV +R E A A ++ GR+++G+ + EF ++ ++
Sbjct: 318 YGELINFKVCRNGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKV 377
Query: 210 ATCRQFEEN---NCNRGGYCNFMH 230
A C ++ ++ C+RG CNF+H
Sbjct: 378 AICGEYMKSRLKTCSRGSACNFIH 401
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 27/218 (12%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGR----GLAMAEHLASI------FGTEK--------DRVN 75
D+ + P P Q +V FA + L+ E L + FGTE+ D+ +
Sbjct: 70 DRPTSNPLPPQ----SVAFASQRMEPSLSAQEVLEKVAQETPNFGTEQASSMILFQDKAH 125
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G +I++
Sbjct: 126 CPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALE--QDEGLECTDEEIEQS 183
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
+E+FYED+ E KFGE+ VC N + H+ GNVYV ++ + A A ++ GR+++G+
Sbjct: 184 YEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGRYFAGK 243
Query: 196 PIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
I EF VT ++ A C ++ + C+RG CNF+H
Sbjct: 244 QITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 281
>gi|367009756|ref|XP_003679379.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
gi|359747037|emb|CCE90168.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
Length = 190
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Query: 78 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 137
FY KIGACRHGD+CS+ H RP S T++L NM P G+D Q FE
Sbjct: 27 FYCKIGACRHGDKCSKKHIRPVRSNTIVLYNMLHIP---ASGLD-----------QSSFE 72
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
DFYED++ E +FG + + VC+N DH+ GNVY+ F +A A+ R+Y RPI
Sbjct: 73 DFYEDVYIEACRFGAVRSMVVCENGNDHLKGNVYLHFEHPNEAQRAMDDFNTRWYDERPI 132
Query: 198 IVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSRS 252
+ + + DFR+A CR+ ++ C RG CNFMH++ + L+ L +SRS
Sbjct: 133 YCDLTHIVDFRDAICRRHDQQACERGDECNFMHIRRPSQGLKIDLERSQTSKSRS 187
>gi|440802051|gb|ELR22990.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 294
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 98/189 (51%), Gaps = 48/189 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP---DM 115
MA HLA IFGTEKD S TLL+ +MY P +
Sbjct: 1 MARHLAEIFGTEKD----------------------------SQTLLIPHMYMPPVPAEW 32
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
T D Q R +EHF DF+EDI +EL FG +E L+VCDN +
Sbjct: 33 PTSPDDVQAMQKIQRDAEEHFNDFFEDIHDELRNFGRLEDLHVCDNTGE----------- 81
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIG 235
A+ AL GRFY GR ++ EFSPVTDFREA CRQ++ N CNRGG CNFMH+K +
Sbjct: 82 ------KAMKALTGRFYGGRLLVPEFSPVTDFREARCRQYDSNECNRGGQCNFMHLKQVD 135
Query: 236 RDLRNKLFG 244
+L +LFG
Sbjct: 136 PELERRLFG 144
>gi|340056926|emb|CCC51265.1| putative U2 splicing auxiliary factor [Trypanosoma vivax Y486]
Length = 239
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRK-IQE 134
C F+ K+GACRHGD C+++H RP+ SPT+L MY P I D Q RK ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPSSSPTVLFPLMYPNPMAIEHIHDRQWDFCFERKYLRR 65
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++ + + G I L V NL DH++GNVY++F E AA + L+ + +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEESSDAARIVRELKAKKLNE 125
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
++ E SPVT+F +A C++ E C RG CN++H+ + R L +KL
Sbjct: 126 IILLPEISPVTNFADACCKEDLEGKCERGTQCNYLHIMKVSRKLMDKL 173
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 5/164 (3%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
++D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 163 QQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALE--QDEGLECTD 220
Query: 130 RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+I++ +E+FYED+ E KFGE+ VC N + H+ GNVYV ++ + A A ++ G
Sbjct: 221 EEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNG 280
Query: 190 RFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
R+++G+ I EF VT ++ A C ++ + C+RG CNF+H
Sbjct: 281 RYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 324
>gi|255730555|ref|XP_002550202.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132159|gb|EER31717.1| predicted protein [Candida tropicalis MYA-3404]
Length = 481
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 46/231 (19%)
Query: 66 IFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP------------ 113
++ + + + C FY K+GACRH RC++ H PT+S T+ +SN+Y P
Sbjct: 211 LYNSGEGLLLCSFYTKVGACRHYGRCTKRHIDPTVSNTIKISNLYPNPLAKYDFPDDEDE 270
Query: 114 -------DMITPGVD---------AQGQP-------------IDPRKIQEHFEDFYEDIF 144
+ GVD A G+ + +IQE F+ FY+D+F
Sbjct: 271 NSEGSEVEEADAGVDVDVNGNKESASGEKTVSKPSNYEPEVQLTEEEIQEKFDLFYKDVF 330
Query: 145 EELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPV 204
+SK GEI+ L VC+N+ +H+ GNVYVQF ++A+ A L +++ RP+ SPV
Sbjct: 331 THISKLGEIKNLVVCENVNNHLNGNVYVQFVRTQEASEASKQLNSEWFNERPVYSTLSPV 390
Query: 205 TDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSRSRSF 255
DF EA C ++ C G CN+MH++ DL K++ RS+ +S+
Sbjct: 391 RDFEEAYCHEYSVGACEHGERCNYMHLRYPTPDLEQKMY-----RSQEKSY 436
>gi|156537789|ref|XP_001608048.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Nasonia vitripennis]
Length = 721
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 6/172 (3%)
Query: 63 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDA 122
L S+ T+ + CPF+ K GACR+GD CSR H RP +S +L+ N Y + +
Sbjct: 162 LRSLNETQPGKEICPFFNKTGACRYGDICSRNHQRPGLSTVILVPNFYTHFSLERHSHEY 221
Query: 123 QGQ---PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
D R+ + HF DFY D+ EL KFG+I+ L C N H+ GN+YV++ E +
Sbjct: 222 DTDVRLEYDHRETRNHFRDFYFDVVPELEKFGKIKTLQYCKNTEAHLRGNLYVEYATERE 281
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AA AL L+GR+Y+GR + EF + +R A C C +G CNF+HV
Sbjct: 282 AARALRGLKGRWYAGRQLHCEFVNLKSWRGAICGMMR---CPKGSACNFLHV 330
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
FGTE+D+ +CPF+ K GAC G RCSR+H P S T L+ NMY P + +G
Sbjct: 178 FGTEQDKAHCPFHLKTGACCFGIRCSRVHFYPDKSSTFLIKNMYNGPGLACDRDQDEGLE 237
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
+++ FE+FYED+ E KFGE+ VC N + H GNVYVQ++ + A A ++
Sbjct: 238 YKDEEVERCFEEFYEDVHTEFLKFGEVVNFKVCKNGSFHWRGNVYVQYKSLDSALLAYNS 297
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+ GR+++G+ + +F +T ++ A C ++ ++ C+ G CNF+H
Sbjct: 298 VNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTACNFIH 344
>gi|71747034|ref|XP_822572.1| U2 splicing auxiliary factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832240|gb|EAN77744.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332325|emb|CBH15319.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRK-IQE 134
C F+ K+GACRHGD C+++H RPT SPT+L MY P I D + RK ++
Sbjct: 6 CIFFSKMGACRHGDGCTKVHVRPTTSPTVLFPFMYPNPAAIEHIQDREWNFHFERKYLRR 65
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HFE FY++ + + G I L V NL DH++GNVY++F + A+ + L+ + +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEDSHDASRIVRELKAKKLND 125
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
++ E SPVT+F EA C++ E C RG CN++H+ + R L KL
Sbjct: 126 IVLLPELSPVTNFAEACCKEDLEGKCERGPQCNYLHIMKVSRKLMEKL 173
>gi|123474332|ref|XP_001320349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903153|gb|EAY08126.1| hypothetical protein TVAG_302130 [Trichomonas vaginalis G3]
Length = 339
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 88/144 (61%)
Query: 87 HGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEE 146
HG+ CSR+H +P +S TLLL+N YQ P + I+ I+ +F++FY D++EE
Sbjct: 2 HGEICSRMHIKPQVSNTLLLANFYQNPYHFMSLLPPDTLIIENETIRNNFDEFYLDVYEE 61
Query: 147 LSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTD 206
L FG I V NL +H++GNV V + E A A + L+GR+Y GRPI V+FSPV +
Sbjct: 62 LRTFGPISEFVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVVN 121
Query: 207 FREATCRQFEENNCNRGGYCNFMH 230
F A CRQF+E C CNF+H
Sbjct: 122 FNVAVCRQFKEGKCPHNEKCNFIH 145
>gi|281354289|gb|EFB29873.1| hypothetical protein PANDA_009769 [Ailuropoda melanoleuca]
Length = 204
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 86/144 (59%), Gaps = 40/144 (27%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPT------------------- 41
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
F +++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEF 201
E A A+ L R+++G+ + E
Sbjct: 82 EDAERAVAELNNRWFNGQAVHAEL 105
>gi|340508294|gb|EGR34030.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 126
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE L+ ++GTE+D+VNCPFYFKIG+CR+ ++C R+HNRP+ S T+L+ +MY T
Sbjct: 1 MAEKLSRMYGTEEDKVNCPFYFKIGSCRYENKCLRIHNRPSESQTVLIKHMYTSS--ATE 58
Query: 119 GVDAQGQPIDPRKIQ---EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
AQG + +I+ + FE+FYE++F EL+ +GEI+ L +CDN+ DHM GNVYV++
Sbjct: 59 LALAQGNRVSEEEIKKALDTFEEFYEEVFLELANYGEIDDLIICDNIGDHMRGNVYVKYI 118
Query: 176 EEEQAA 181
+E AA
Sbjct: 119 KESSAA 124
>gi|390363017|ref|XP_788119.3| PREDICTED: uncharacterized protein LOC583099 [Strongylocentrotus
purpuratus]
Length = 746
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 69 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQR----PDMITPGVDAQG 124
EK C F+ K GACR +RCSR H P TL++ MY PD G
Sbjct: 177 AEKKEEICSFFLKTGACRFKERCSRTHPYPEQGTTLMIPGMYTNFGLGPDFKDEYDADVG 236
Query: 125 QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
D +F +FYED+ E ++GE+ L VC N H+ GNVYVQ+R EE+AA A
Sbjct: 237 LECDEESAYLNFHEFYEDVLPEFREYGEVVQLKVCRNWEPHLRGNVYVQYRSEEEAAKAA 296
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
GRFY G+ + + PV+ ++ A C F + C RG +CNF+HV
Sbjct: 297 QVFAGRFYGGKQLDPRYCPVSRWKPAICGLFHRDKCPRGKHCNFLHV 343
>gi|297739459|emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 33/224 (14%)
Query: 40 PFPSQ-----DKDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 94
P P Q D ++++ + + A FGTE+D+ +CPF+ K GACR G RCSR+
Sbjct: 162 PLPPQSEAFSDHNASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTGACRFGQRCSRV 221
Query: 95 HNRPTISPTLLLSNMYQRPDM---------------------ITPGVDAQGQPIDP---- 129
H P S TLL+ NMY P + P + + +P
Sbjct: 222 HFYPDKSCTLLIKNMYNGPGLAWEQDEGLEKFISRFIWWSSWFWPWLGWTCRRQNPLYTD 281
Query: 130 RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+++ +E+FYED+ E KFGEI VC N + H+ GNVYV ++ + A A H++ G
Sbjct: 282 EEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSING 341
Query: 190 RFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+Y+G+ + EF VT ++ A C ++ ++ C+ G CNF+H
Sbjct: 342 LYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIH 385
>gi|397606182|gb|EJK59239.1| hypothetical protein THAOC_20568 [Thalassiosira oceanica]
Length = 109
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 76/99 (76%)
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
ID K +E F FYED +EELSKFG IE L++CDNL DHM+G+ Y +F EEE+AA AL+
Sbjct: 10 IDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADALNV 69
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGY 225
+ GR+Y GR + VEFSPV DFREA CR F+E++C RGG+
Sbjct: 70 MNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGF 108
>gi|114676797|ref|XP_512599.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 4 [Pan
troglodytes]
gi|410220668|gb|JAA07553.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410247510|gb|JAA11722.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410287276|gb|JAA22238.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410329231|gb|JAA33562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
Length = 202
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
F +++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
E A+ L R+++G+ + V C F
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|359392870|gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays]
Length = 368
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 8/188 (4%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASI------FGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q A L+ E L + FGTE+D+ +CPF+ K GACR
Sbjct: 178 DRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRF 237
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEEL 147
G RCSR+H P S TLL+ NMY P + +G +I++ +E+FYED+ E
Sbjct: 238 GLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLEFTDEEIEQSYEEFYEDVHTEF 295
Query: 148 SKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
KFGE+ VC N + H+ GNVYV ++ + A A ++ GR+++G+ I EF VT +
Sbjct: 296 LKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRW 355
Query: 208 REATCRQF 215
+ A C F
Sbjct: 356 KAAICDMF 363
>gi|406603045|emb|CCH45380.1| Splicing factor U2af small subunit A [Wickerhamomyces ciferrii]
Length = 160
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 106 LSNMYQRPDM-------ITPGVDAQGQPIDPRKIQE--HFEDFYEDIFEELSKFGEIECL 156
++N+YQ PD+ ++ P P+ QE F+DFY+DIF E S G+I+ L
Sbjct: 1 MTNLYQNPDVSRDHNNNTNSKTESNELPTIPKDQQEVIKFDDFYKDIFIESSLIGQIDEL 60
Query: 157 NVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFE 216
VC+N DH+ GNVYV+F EE A A R+Y+ +PI E SPV DFR +TCRQ +
Sbjct: 61 TVCENHNDHLNGNVYVKFNSEEAATKARDLFSTRWYNSKPIYCELSPVVDFRGSTCRQHD 120
Query: 217 ENNCNRGGYCNFMHVKLIGRDLRNKL 242
C+RGG CNFMHVK RDL L
Sbjct: 121 SKTCDRGGMCNFMHVKRPSRDLLKTL 146
>gi|94536807|ref|NP_659424.2| splicing factor U2AF 26 kDa subunit isoform 2 [Homo sapiens]
gi|261861058|dbj|BAI47051.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
F +++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
E A+ L R+++G+ + V C F
Sbjct: 82 EDGERAVAELSNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|397490403|ref|XP_003816194.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Pan
paniscus]
Length = 202
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
F +++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
E A+ L R+++G+ + V C F
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|426388320|ref|XP_004060589.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 202
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+ T
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKST------------------- 41
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
F +++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
E A+ L R+++G+ + V C F
Sbjct: 82 EDGQWAVAELNNRWFNGQAVHGNVPEVASATSCICSPF 119
>gi|18088983|gb|AAH21186.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Homo sapiens]
gi|123983214|gb|ABM83348.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
gi|123997921|gb|ABM86562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLHN+PT
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
F +++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
E A+ L R+++G+ + V C F
Sbjct: 82 EDGERAVAELSNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|260796659|ref|XP_002593322.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
gi|229278546|gb|EEN49333.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
Length = 571
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 75 NCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY--------QRPDMITPGVDAQGQP 126
+CPF+ K GACR GDRCSR H RP S TLL++ M+ QR D G+
Sbjct: 129 DCPFFKKTGACRFGDRCSRKHTRPDSSTTLLIAGMFATFALDQTQRDDFDETMYLEYGED 188
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
++ + F +FY D E G + VC N H+ GNVYVQ+ EE A+
Sbjct: 189 ----ELYKDFIEFYNDTLPEFRTLGRVVQFKVCCNHEPHLRGNVYVQYEREEDCLEAIRK 244
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV-KLIGRDLRN 240
GRFY+G+ + E +PVT ++ A C F C +G +CNF+HV GR+ R+
Sbjct: 245 FHGRFYAGKQLTCEMTPVTSWKSAICGLFSRKRCPKGKHCNFLHVFPNPGREFRD 299
>gi|326477662|gb|EGE01672.1| splicing factor U2AF 35 kDa subunit [Trichophyton equinum CBS
127.97]
Length = 169
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 19/164 (11%)
Query: 115 MITPGVDAQGQP----------IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLAD 164
M+T ++ P ++P ++Q HF+ FYED + E+ K+GEIE + VC+N D
Sbjct: 1 MVTAARESTSSPSTRNTIPKNKMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNND 60
Query: 165 HMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG 224
H+IGNVY +F+ E+ A A AL R+Y+ RPI E SPVTDFREA CR C RGG
Sbjct: 61 HLIGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGG 120
Query: 225 YCNFMHVKLIGRDLRNKL------FGRYR---RRSRSRSFSPIP 259
+CNF+H K +L +L + R R RS +RS SP P
Sbjct: 121 FCNFIHRKEPSEELDRELELSTKKWLRLRGRDERSVTRSPSPEP 164
>gi|441627326|ref|XP_004089246.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Nomascus
leucogenys]
Length = 202
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 87/158 (55%), Gaps = 40/158 (25%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VN FYFKIGACRHGDRCSRLHN+PT
Sbjct: 1 MAEYLASIFGTEKDKVNRSFYFKIGACRHGDRCSRLHNKPT------------------- 41
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREE 177
F +++F EL K+GEIE +NVCDNL DH++GNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
E A A+ L R+++G+ + V C F
Sbjct: 82 EDAERAVAELSNRWFNGQAVHGNVPEVASATSCICDPF 119
>gi|226469292|emb|CAX70125.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 198
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 72/95 (75%)
Query: 149 KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFR 208
K+GEIE +NVCDNL DH++GNVY++FR EE A A+ L R++ GRP+ E SPVTDFR
Sbjct: 69 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 128
Query: 209 EATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
EA CRQ+E C RGG+CNFMH+K I R+L KL+
Sbjct: 129 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 163
>gi|390478473|ref|XP_003735517.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Callithrix jacchus]
Length = 458
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 120/255 (47%), Gaps = 26/255 (10%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD-AQGQPID 128
EKD NCPF K GACR GD CSR HN PT SPTLL+ M+ I G++ + D
Sbjct: 164 EKDGANCPFXSKTGACRFGDGCSRKHNFPTSSPTLLIETMF-----IMFGMEQCRRNDYD 218
Query: 129 PRKIQE--------HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQA 180
P I E F DFYED+ E G + L V NL H+ GN+YV ++ E +
Sbjct: 219 PDAILEDSKEETYPQFLDFYEDVLPEFKNVGRVIQLRVSCNLKPHLRGNIYVHYQLEAEX 278
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRN 240
AAL R+Y+G + EF PV ++ A C FE+ G +CNF+ V RN
Sbjct: 279 QAALSLFNKRWYTGPHLQCEFCPVIRWKMAICSSFEKQQHPTGKHCNFLPV------FRN 332
Query: 241 KL--FGRYRR---RSRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTH-SRSST 294
+ F R S +R+ S R R G D R+ + ER R +H + S
Sbjct: 333 PISEFWEVNRDICLSLNRTASSFGKNSXRRERMGHHDEYSYKRNGESERKRSSHXGKKSH 392
Query: 295 SSRSRTPVREGSEER 309
S + R GS R
Sbjct: 393 KHTSVSQERHGSXSR 407
>gi|367000677|ref|XP_003685074.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
gi|357523371|emb|CCE62640.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
Length = 229
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 25/203 (12%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP-----------DMITP 118
EK+R C FY+K+G CRHG++CS+ H P S T++L N+ P T
Sbjct: 16 EKER--CLFYYKVGVCRHGNKCSKSHTSPNRSHTIVLLNLVDFPRNADVTTSNTATTTTD 73
Query: 119 GVDAQGQPIDPRKI-----------QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMI 167
D Q P K + ++ YED++ EL+K+G I + +CDN DH+
Sbjct: 74 ESDKSTQETKPNKPTTKNKSTPPIDDKEYDSIYEDLYIELAKYGRIMEMYICDNGNDHLR 133
Query: 168 GNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEE-NNCNRGGYC 226
GNVYV++ E+ A A + L R+++G+PI + + + DF EA CR+ EE + C RG +C
Sbjct: 134 GNVYVRYSSEQNARDANNELNTRWFNGKPIYCDLTHIHDFGEAICRKPEEKSGCERGDHC 193
Query: 227 NFMHVKLIGRDLRNKLFGRYRRR 249
NFMH++ L+ L R++
Sbjct: 194 NFMHIRKPSPQLQTDLENAQRKK 216
>gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP 126
+GTE+D NCPF+ K G+CR GDRCSR H PT SPTL++ +M++ M D
Sbjct: 152 YGTERDISNCPFFLKTGSCRFGDRCSRKHVYPTASPTLMIRSMFKTFGMEEARRDDYDMD 211
Query: 127 I----DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
++ E F +FY D+ E G++ V N H+ GNVYVQF EEQ
Sbjct: 212 ACLEHSEEELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFGSEEQCKE 271
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQ---------------------------- 214
AL GR+Y+GR + E PVT ++ A C Q
Sbjct: 272 ALIKFNGRWYAGRQLHCEMCPVTRWKNAICGQLLLSHHIRAHSNVHALDLPLRMCFVFLP 331
Query: 215 --FEENNCNRGGYCNFMHV 231
F+ C +G +CNF+HV
Sbjct: 332 GLFDRQKCPKGKHCNFLHV 350
>gi|383865202|ref|XP_003708064.1| PREDICTED: uncharacterized protein LOC100879762 [Megachile
rotundata]
Length = 620
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G+ E L + ++ + CPF+ K GACR+GD CSR H R +S +L+ Y
Sbjct: 153 YIDDGIKTPEALREVIESQPGKELCPFFNKTGACRYGDTCSRNHRRVCLSKVILVPGFYT 212
Query: 112 RPDMITPGVDAQ---GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + + + ++HF +FY+D+ EL FG I+ L C N H+ G
Sbjct: 213 HFSLEKNSAEYDTDIALEFETSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEIHLRG 272
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
N+YV++ E +AA AL L+GR+Y+GR + EF + +R A C + C +G CNF
Sbjct: 273 NLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNF 329
Query: 229 MHV 231
+H
Sbjct: 330 LHT 332
>gi|350422847|ref|XP_003493303.1| PREDICTED: hypothetical protein LOC100742355 [Bombus impatiens]
Length = 638
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G+ E L + ++ + CPF+ K GACR+GD CSR H R +S +L+ Y
Sbjct: 162 YIDNGIKTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPGFYT 221
Query: 112 RPDMITPGVDAQ---GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + + + ++HF +FY+D+ EL FG+I+ L C N H+ G
Sbjct: 222 HFSLEKNSAEYDTDIALEFESSETRQHFREFYKDVVPELESFGKIKTLKYCCNTEVHLRG 281
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
N+YV++ E +AA AL L+GR+Y+GR + EF + +R A C + C +G CNF
Sbjct: 282 NLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVCGM---SKCPKGRACNF 338
Query: 229 MHV 231
+H
Sbjct: 339 LHT 341
>gi|225554163|gb|EEH02527.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
Length = 147
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 87/142 (61%), Gaps = 9/142 (6%)
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
++P ++Q HF+ FYED + E+ K+GE+E + VCDN DH+IGNVY +F+ E+ A A A
Sbjct: 1 MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDA 60
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRY 246
L R+Y+ RPI E SPVTDFREA CR C RGG+CN +H K +L +L
Sbjct: 61 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNLIHRKEPSPELERELELST 120
Query: 247 RR---------RSRSRSFSPIP 259
++ RS +RS SP P
Sbjct: 121 KKWLKMRGRDERSVTRSPSPEP 142
>gi|340715501|ref|XP_003396250.1| PREDICTED: hypothetical protein LOC100645560 [Bombus terrestris]
Length = 629
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G+ E L + ++ + CPF+ K GACR+GD CSR H R +S +L+ Y
Sbjct: 153 YIDNGIKTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPGFYT 212
Query: 112 RPDMITPGVDAQ---GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + + + ++HF +FY+D+ EL FG I+ L C N H+ G
Sbjct: 213 HFSLEKNSAEYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRG 272
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
N+YV++ E +AA AL L+GR+Y+GR + EF + +R A C + C +G CNF
Sbjct: 273 NLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVCGM---SKCPKGRACNF 329
Query: 229 MHV 231
+H
Sbjct: 330 LHT 332
>gi|328789326|ref|XP_392139.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Apis mellifera]
Length = 455
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G+ E L + ++ + CPF+ K GACR+GD CSR H R +S +L+ + Y
Sbjct: 153 YIDNGIKTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPSFYT 212
Query: 112 RPDMITPGVDAQ---GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + + + ++HF +FY+D+ EL FG I+ L C N H+ G
Sbjct: 213 HFSLEKNCAEYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRG 272
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
N+YV++ E +AA AL L+GR+Y+GR + EF + +R A C + C +G CNF
Sbjct: 273 NLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNF 329
Query: 229 MHV 231
+H
Sbjct: 330 LHT 332
>gi|380019200|ref|XP_003693502.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Apis florea]
Length = 459
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G+ E L + ++ + CPF+ K GACR+GD CSR H R +S +L+ + Y
Sbjct: 153 YIDNGIKTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPSFYT 212
Query: 112 RPDMITPGVDAQ---GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + + + ++HF +FY+D+ EL FG I+ L C N H+ G
Sbjct: 213 HFSLEKNCAEYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRG 272
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
N+YV++ E +AA AL L+GR+Y+GR + EF + +R A C + C +G CNF
Sbjct: 273 NLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNF 329
Query: 229 MHV 231
+H
Sbjct: 330 LHT 332
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI----DPRK 131
C F+ K GACR GDRCSR H ++S TL++ M+ M D I D +
Sbjct: 34 CSFFIKTGACRFGDRCSRYHPPTSVSTTLVIPKMFSNFSMEQCMRDEYDTDICLEFDEKD 93
Query: 132 IQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
F FY+D+ E GE+ VC N H+ GNVYVQ+ E++ + A+ GR+
Sbjct: 94 AYADFLSFYDDVLGEFRALGEVIQFKVCCNWEPHLRGNVYVQYNSEDECSKAISMFNGRY 153
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
Y+G+ + + P+T ++ A C F + C +G +CNF+HV
Sbjct: 154 YAGKQLTCLYCPITKWKSAICGLFAKKRCPKGKHCNFLHV 193
>gi|193788564|ref|NP_001123327.1| zinc finger protein ZF(C3H)-13 [Ciona intestinalis]
gi|93003114|tpd|FAA00140.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 479
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 92/168 (54%), Gaps = 13/168 (7%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-----------RPDMITPGVDAQG 124
C F+ ++GACR GD CS+LH +PT S TLLL +M+ R ++ D
Sbjct: 211 CYFFERVGACRFGDSCSKLHEKPTSSRTLLLPSMFNTFAFDIASRASRSNVHGDSSDLAL 270
Query: 125 QPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAAL 184
+ D + E FE FY+D+F E +KFG +E L VC N H+ GNVYVQ+ QA A
Sbjct: 271 EHSD-EDLYEDFEVFYDDVFPEFNKFGHVEQLKVCCNRDQHLRGNVYVQYATVSQAETAF 329
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQFEENN-CNRGGYCNFMHV 231
+L GRFY G+ + + + + A C + C RGG+CNF+HV
Sbjct: 330 QSLNGRFYGGKLLQCMYVTILSWSSAICGLYCTGRPCPRGGHCNFLHV 377
>gi|307200055|gb|EFN80401.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Harpegnathos saltator]
Length = 490
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 10/231 (4%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G E L + T+ + CPF+ K GACR+GD+CS+ H +S +L+ Y
Sbjct: 151 YVDNGAKTPEALREVSETQPGKELCPFFMKTGACRYGDKCSKNHRAVFLSKVILIPGFYS 210
Query: 112 RPDMITPGVDAQGQ---PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + + + +HF +FYED+ EL +G+I L C N H+ G
Sbjct: 211 HFSLEKNSAEYDTDVSLEFETSETWQHFREFYEDVITELESYGKISVLRCCCNTETHLRG 270
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNF 228
N+YV+++ E +A A L GR+Y+G+ + EF + +R A C + C +G CNF
Sbjct: 271 NLYVEYQTEREATRAWKRLNGRWYAGKQLRCEFVNLISWRNAICGM---SKCPKGTACNF 327
Query: 229 MHVKLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRD 279
+H R+ RN+ + R +S RS HRR G + S RD
Sbjct: 328 LHT---FRNPRNEYGIKDIWRLKSTPQISNNSKRSEHRR-GKSRWEESVRD 374
>gi|270006539|gb|EFA02987.1| hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]
Length = 347
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 44 QDKDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT 103
Q +D F G EHL ++ CPF+ K ACR D CSR H +P +S
Sbjct: 136 QLRDEIENFIANGGDTPEHLKVSVEMNPNKPVCPFFQKTSACRFRDSCSRNHIKPGVSRI 195
Query: 104 LLLSNMYQRPDM--ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDN 161
LL+ N Y + D + + HF+DF+ D+ E+ +FG I VC N
Sbjct: 196 LLIPNFYSHYSLEQTENEYDDSSLEFENHETYSHFKDFFFDVLPEMERFGRIRQFKVCCN 255
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCN 221
H+ GNVYV++ +A + GR+Y GR + VEF + ++ A C C
Sbjct: 256 RESHLRGNVYVEYSTTREAVKSFQVFNGRWYGGRQLSVEFCNIESWKSAICGLHSRKKCP 315
Query: 222 RGGYCNFMHV 231
+G CNF+HV
Sbjct: 316 KGSSCNFLHV 325
>gi|156838866|ref|XP_001643131.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113726|gb|EDO15273.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 12/171 (7%)
Query: 72 DRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRK 131
DR C FY+K+G CRHG++CS+ H P S ++++ NM Q R
Sbjct: 18 DRERCHFYYKVGVCRHGNKCSKKHIPPANSRSIVVLNM------------IAFQSDGTRM 65
Query: 132 IQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
F+ +YED+F EL KFG+I+ + +N DH+ GNVY + A A +L R+
Sbjct: 66 SDVDFDGYYEDVFIELCKFGKIKSFLITENGNDHLRGNVYALYDNVRSAKEARDSLNTRW 125
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
Y+ +P+ + + + DF +A CR+++ +C+RG CNFMHV+ L++ L
Sbjct: 126 YNEKPLYSDLTHIVDFNDAICRKYDVGSCDRGNECNFMHVRRPSPSLKSDL 176
>gi|380804095|gb|AFE73923.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 90 RCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDAQGQPIDPRKIQEHFEDFYED 142
RCSR HN PT SPTLL+ +M+ R D P + +I + F DFYED
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLE---YSEEEIYQQFLDFYED 57
Query: 143 IFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
+ E G++ V NL H+ GNVYVQ++ EE+ AAL GR+Y+GR + EF
Sbjct: 58 VLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFC 117
Query: 203 PVTDFREATCRQFEENNCNRGGYCNFMHV--------------KLIGRDLRNKLFGRY-- 246
PVT ++ A C FE C RG +CNF+HV + D FG+
Sbjct: 118 PVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSE 177
Query: 247 RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYERSRRTHSRSSTS 295
RR LR R D Y+R S R R R +++H R+S S
Sbjct: 178 RRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSHRGKKSHKRTSKS 229
>gi|403255704|ref|XP_003920552.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Saimiri boliviensis
boliviensis]
Length = 464
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 46 KDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLL 105
+ S + G+ HL +I G +CSR HN PT SPTLL
Sbjct: 152 RSSQLAIPGKAFGCPHHLLAILGL--------------------KCSRKHNFPTSSPTLL 191
Query: 106 LSNMYQ-------RPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
+ +M+ R D P + + + F DFYED+ E G++ V
Sbjct: 192 IKSMFTTFGMEQCRRDDYDPDASLE---YSEEETYQQFLDFYEDVLPEFKNVGKVIQFKV 248
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEEN 218
NL H+ GNVYVQ++ EE+ AAL GR+Y+GR + EF PVT ++ A C FE
Sbjct: 249 SCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQ 308
Query: 219 NCNRGGYCNFMHV--------------KLIGRDLRNKLFGRY--RRRSRSRSFSPIPHLR 262
C RG +CNF+HV + D FG+ RR LR
Sbjct: 309 QCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSERRERMGHHDEYYSRLR 368
Query: 263 SRHRRDGDRDYRR---SYRDRDYERSRRTHSRS 292
R D Y+R S R R R +++H R+
Sbjct: 369 GRRNPSPDHSYKRNGESERKRSSHRGKKSHKRT 401
>gi|442752923|gb|JAA68621.1| Putative u2 snrnp splicing factor small subunit [Ixodes ricinus]
Length = 116
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+HN+PT S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 119 GVDAQGQP-IDPRKIQEHFEDFYEDIFEEL 147
D + ++QEHF++F+ED+F EL
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVEL 90
>gi|158299259|ref|XP_319372.4| AGAP010194-PA [Anopheles gambiae str. PEST]
gi|157014279|gb|EAA13785.4| AGAP010194-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 63 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP---- 118
L SI T D +C F+ K GACRHG RC H P +S +L+ N + P +
Sbjct: 153 LQSIQHTRADAEDCKFFLKTGACRHGYRCGGNHPTPGVSQVILIPNFFSHPALEQAVHAE 212
Query: 119 -GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREE 177
G DA+ + D ++ + +F+ DI +E FG + + VC N H+ G+VY+++
Sbjct: 213 YGHDARLE-FDEDDLKNSYNEFFRDIIQEFEMFGTVRHIFVCRNSVAHLRGSVYIEYESM 271
Query: 178 EQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
AAAA + GRFY+ + + VEF + A C E N C +G CNF+H+
Sbjct: 272 RNAAAAYLRMNGRFYAKKQLHVEFRNTLTWPTAVCGLNEMNRCQKGAGCNFLHI 325
>gi|380804933|gb|AFE74342.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 108/232 (46%), Gaps = 29/232 (12%)
Query: 90 RCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDAQGQPIDPRKIQEHFEDFYED 142
RCSR HN PT SPTLL+ +M+ R D P + + + F DFYED
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLE---YSEEETYQQFLDFYED 57
Query: 143 IFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
+ E G++ V NL H+ GNVYVQ++ EE+ AAL GR+Y+GR + EF
Sbjct: 58 VLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFC 117
Query: 203 PVTDFREATCRQFEENNCNRGGYCNFMHV--------------KLIGRDLRNKLFGRY-- 246
PVT ++ A C FE C RG +CNF+HV + D FG+
Sbjct: 118 PVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSE 177
Query: 247 RRRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYERSRRTHSRSSTS 295
RR LR R D Y+R S R R R +++H R+S S
Sbjct: 178 RRERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSHRGKKSHKRTSKS 229
>gi|226489603|emb|CAX74952.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 123
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 156 LNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
+NVCDNL DH++GNVY++FR EE A A+ L R++ GRP+ E SPVTDFREA CRQ+
Sbjct: 1 MNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQY 60
Query: 216 EENNCNRGGYCNFMHVKLIGRDLRNKLF 243
E C RGG+CNFMH+K I R+L KL+
Sbjct: 61 ELGECTRGGFCNFMHLKPISRELCRKLY 88
>gi|426395277|ref|XP_004063901.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 295
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 91 CSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDAQGQPIDPRKIQEHFEDFYEDI 143
CSR HN PT SPTLL+ +M+ R D P + + + F DFYED+
Sbjct: 4 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLE---YSEEETYQQFLDFYEDV 60
Query: 144 FEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSP 203
E G++ V NL H+ GNVYVQ++ EE+ AAL GR+Y+GR + EF P
Sbjct: 61 LPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCP 120
Query: 204 VTDFREATCRQFEENNCNRGGYCNFMHV--------------KLIGRDLRNKLFGRY--R 247
VT ++ A C FE C RG +CNF+HV + D FG+ R
Sbjct: 121 VTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSER 180
Query: 248 RRSRSRSFSPIPHLRSRHRRDGDRDYRR---SYRDRDYERSRRTHSRSSTS 295
R LR R D Y+R S R R R +++H R+S S
Sbjct: 181 RERMGHHDDYYSRLRGRRNPSPDHSYKRNGESERKRSSHRGKKSHKRTSKS 231
>gi|302757309|ref|XP_002962078.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
gi|300170737|gb|EFJ37338.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
Length = 132
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
+D+ +CPF+ K GACR G RCSRLH P S TLL+ NMY P + +G
Sbjct: 2 QDKTHCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGLAWE--HDEGLECTDE 59
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+I++ FE+FYED+ E KFGE+ VC N + H+ GNVYV ++ E A AA AL GR
Sbjct: 60 EIEQKFEEFYEDVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEADAVAACLALSGR 119
Query: 191 FYSGRPIIVEFS 202
FY+ + ++ +S
Sbjct: 120 FYASKQVLARYS 131
>gi|344244411|gb|EGW00515.1| Splicing factor U2AF 35 kDa subunit [Cricetulus griseus]
Length = 98
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC YFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSLYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEEL 147
D+ + +++EH+++F+E++F E+
Sbjct: 61 YADSLHCAVSDVEMKEHYDEFFEEVFTEM 89
>gi|380804633|gb|AFE74192.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 199
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 90 RCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDAQGQPIDPRKIQEHFEDFYED 142
RCSR HN PT SPTLL+ +M+ R D P + + + F DFYED
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLE---YSEEETYQQFLDFYED 57
Query: 143 IFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
+ E G++ V NL H+ GNVYVQ++ EE+ AAL GR+Y+GR + EF
Sbjct: 58 VLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFC 117
Query: 203 PVTDFREATCRQFEENNCNRGGYCNFMHV 231
PVT ++ A C FE C RG +CNF+HV
Sbjct: 118 PVTRWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|157128201|ref|XP_001655088.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108872656|gb|EAT36881.1| AAEL011071-PA [Aedes aegypti]
Length = 509
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 72 DRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP----- 126
DR C F+ K+GACR G RCS H P +S LLL N + P +D Q P
Sbjct: 185 DRNPCVFFGKVGACRFGVRCSSDHAIPGLSELLLLPNFFAHP-----ALDHQQHPEYGLD 239
Query: 127 ----IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAA 182
D ++ + +F+ D+ EE FG I V N H+ GNVYVQ+ + AA
Sbjct: 240 SSIEFDDDELYRSYTEFFMDVIEEFESFGPISGFFVTRNFEPHLRGNVYVQYEKVRDAAK 299
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
A + GRFY+ + + VEF + A C FE + C +G CN++H+
Sbjct: 300 AYQRMNGRFYASKQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCNYLHL 348
>gi|189237330|ref|XP_973215.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 1, related sequence 2 [Tribolium
castaneum]
Length = 337
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 87/190 (45%), Gaps = 12/190 (6%)
Query: 44 QDKDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT 103
Q +D F G EHL ++ CPF+ K ACR D CSR H +P +S
Sbjct: 136 QLRDEIENFIANGGDTPEHLKVSVEMNPNKPVCPFFQKTSACRFRDSCSRNHIKPGVSRI 195
Query: 104 LLLSNMYQRPDM--ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDN 161
LL+ N Y + D + + HF+DF+ D+ E+ +FG I VC N
Sbjct: 196 LLIPNFYSHYSLEQTENEYDDSSLEFENHETYSHFKDFFFDVLPEMERFGRIRQFKVCCN 255
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCN 221
H+ GNVYV++ +A + GR+Y GR + VEF + ++ A C
Sbjct: 256 RESHLRGNVYVEYSTTREAVKSFQVFNGRWYGGRQLSVEFCNIESWKSAIC--------- 306
Query: 222 RGGYCNFMHV 231
G CNF+HV
Sbjct: 307 -GSSCNFLHV 315
>gi|332026662|gb|EGI66771.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Acromyrmex echinatior]
Length = 478
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 9/185 (4%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G+ E L I + + CPF+ K G CR+G+ CS+ H + +S +L+ Y
Sbjct: 153 YIDNGVKTPEVLREIVDNQPTKELCPFFSKTGVCRYGNACSKNHRKFFLSRVILIPGFYS 212
Query: 112 ----RPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMI 167
++ D + + HF +FYED+ EL FG I+ L C N H+
Sbjct: 213 HFSLEKNLAEYDTDV-ALEFERSETLHHFYEFYEDVITELESFGRIKTLKCCCNKEIHLR 271
Query: 168 GNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG-YC 226
GNVYV++ E +AA A L+GR+Y+G+ + EF T +R A C N C +G +C
Sbjct: 272 GNVYVEYYTEREAARAWRNLKGRWYAGKQLNCEFVNFTSWRGAVCGI---NKCPKGSKFC 328
Query: 227 NFMHV 231
NF+H
Sbjct: 329 NFLHT 333
>gi|401881081|gb|EJT45386.1| splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 128
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 5/130 (3%)
Query: 95 HNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIE 154
H +P S T+LL N+Y P TP +G + ++Q F+ FYED F EL K+G ++
Sbjct: 4 HIKPQFSQTVLLPNVYNNPSH-TP----EGLTMTKDELQADFDRFYEDFFIELCKYGNVQ 58
Query: 155 CLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQ 214
++VCDN+ DH+ GNVYV++ E +A A+ L R+Y RP+ E SPV+DFREA CRQ
Sbjct: 59 EMHVCDNIGDHLEGNVYVRYEWEAEANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQ 118
Query: 215 FEENNCNRGG 224
E C R G
Sbjct: 119 NELGECKREG 128
>gi|241948859|ref|XP_002417152.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
gi|223640490|emb|CAX44743.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
Length = 374
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 8/165 (4%)
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+ Q F+ F++DIF +SKFG+I + VC+N +H+ GNVYV F E A A L
Sbjct: 209 QTQHDFDQFFQDIFVHISKFGQISDIAVCENENNHLAGNVYVMFESPEDAYNANLQLNQE 268
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFE-ENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRR 249
+Y+GRP+ E SPV+DF EA C + +NC RG CN+MH++L RDL L+
Sbjct: 269 WYNGRPVYSELSPVSDFNEACCEAYSYYHNCERGAMCNYMHIRLPSRDLEQSLY-----E 323
Query: 250 SRSRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSST 294
S+++S+ I + +R+ D + S D E + SST
Sbjct: 324 SQTKSY--ILKQLEKLKRELPADTKPSASTNDEETNGNEKGISST 366
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
V C FY +IGACRHG+ CS+ H +P S T+LL+N+YQ P +
Sbjct: 20 VLCSFYSRIGACRHGENCSKKHLKPISSRTILLANLYQNPKL 61
>gi|2833358|sp|Q29350.3|U2AF1_PIG RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
Length = 82
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 62/82 (75%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 119 GVDAQGQPIDPRKIQEHFEDFY 140
D + ++QEH+++F+
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFF 82
>gi|213688747|gb|ACJ53923.1| U2 small nuclear RNA auxiliary factor 1 [Bubalus bubalis]
Length = 110
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Query: 104 LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVCDNL 162
+ L N+Y+ P + D + ++QEH+++F+E++F E+ K+GE+E +NVCDNL
Sbjct: 1 IALLNIYRNPQNSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL 60
Query: 163 ADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
DH++GNVYV+FR EE A A+ L R+++G+PI E SPVTDFREA C
Sbjct: 61 GDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACC 110
>gi|328352397|emb|CCA38796.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 , RNA-binding motif and
serine/arginine rich protein 2 [Komagataella pastoris
CBS 7435]
Length = 243
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 102/221 (46%), Gaps = 50/221 (22%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--------ITPGVDAQG 124
RV FY +IGACRHG++C + H PT S ++L N + + + D Q
Sbjct: 12 RVCSAFYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADEGDKQK 71
Query: 125 QPI-----------------------------------DP----RKIQEH--FEDFYEDI 143
Q + DP ++I E F +DI
Sbjct: 72 QQLSGDKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNKLLQDI 131
Query: 144 FEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
F ELS +G IE + +C+N H+ GNVY++F +E AA L R+Y+GRPI E S
Sbjct: 132 FVELSLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPIYSELS 191
Query: 203 PVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
PV F EATCR+ + C RG CN+MH+K + N LF
Sbjct: 192 PVRSFEEATCRKHDFGRCERGDMCNYMHIKRAPPTVTNNLF 232
>gi|396082086|gb|AFN83698.1| U2 small nuclear RNA auxillary factor [Encephalitozoon romaleae
SJ-2008]
Length = 259
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C FY K CR+G C++ H P S +++ NMY P + +D +Q H
Sbjct: 8 CIFYSKTNGCRYGLECTKAHRIPARSKVVVVKNMYLYPK------NDPDSKLDNEAVQIH 61
Query: 136 FEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
+ FYED F E+S K+G + L + N + ++GN+Y++F +E+ + + + R+YSG
Sbjct: 62 LDLFYEDWFSEVSMKYGAVRMLAIASNSSLQLLGNIYIEFEDEKASLRCIEDIGKRYYSG 121
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
+ I+VE + C +E+ C +G C F+HV + L +LF
Sbjct: 122 KRIVVELGNCYRISDGVCTDYEKGLCGKGERCGFIHVAKVTESLMEELF 170
>gi|254567930|ref|XP_002491075.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030872|emb|CAY68795.1| Hypothetical protein PAS_chr2-1_0187 [Komagataella pastoris GS115]
Length = 239
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 100/216 (46%), Gaps = 50/216 (23%)
Query: 78 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM--------ITPGVDAQGQPI-- 127
FY +IGACRHG++C + H PT S ++L N + + + D Q Q +
Sbjct: 13 FYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADEGDKQKQQLSG 72
Query: 128 ---------------------------------DP----RKIQEH--FEDFYEDIFEELS 148
DP ++I E F +DIF ELS
Sbjct: 73 DKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNKLLQDIFVELS 132
Query: 149 -KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
+G IE + +C+N H+ GNVY++F +E AA L R+Y+GRPI E SPV F
Sbjct: 133 LNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPIYSELSPVRSF 192
Query: 208 REATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
EATCR+ + C RG CN+MH+K + N LF
Sbjct: 193 EEATCRKHDFGRCERGDMCNYMHIKRAPPTVTNNLF 228
>gi|357617275|gb|EHJ70693.1| hypothetical protein KGM_02050 [Danaus plexippus]
Length = 392
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 4/195 (2%)
Query: 61 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV 120
+ L +++ + + CPFY K CR GD CSR H P IS LL N++ +
Sbjct: 146 QELLTLYESRPNCDPCPFYAKTACCRFGDECSRNHKYPGISKILLAPNLFGHFGLENSNF 205
Query: 121 DAQGQPI----DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ I + + F++F+ DI E KFG++ + VC+N H+ GN Y+++ +
Sbjct: 206 NEYDTDIMLEYEDSDTYKDFKEFFFDILPEFQKFGQVVEIKVCNNFEKHLRGNTYIEYSD 265
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
A +A AL R+Y G+ + ++F + + A C C +G CNF+HV
Sbjct: 266 VRSAVSAYRALHTRWYGGKQLSLQFCRLLSWSSAICGLQVTGRCPKGRACNFLHVFKNPI 325
Query: 237 DLRNKLFGRYRRRSR 251
DL RY +R +
Sbjct: 326 DLHIAYEKRYSKRQQ 340
>gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana]
Length = 836
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 52/213 (24%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP----------DMITPG 119
E D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +++T
Sbjct: 268 EMDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLELLTLI 327
Query: 120 VDAQGQPIDPRKIQEH----FEDFYEDIFEELSKFGEIECLNVCD--------------- 160
P + E +E+FYED+ E K+GE+ VC
Sbjct: 328 YSLSLFPPSLQYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRFSSAPSPPFPSFPLP 387
Query: 161 --------------------NLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
N + H+ GNVYV +R E A A ++ GR+++G+ + E
Sbjct: 388 PLFFLLSIISHRFILYQIRINGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCE 447
Query: 201 FSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
F ++ ++ A C ++ ++ C+RG CNF+H
Sbjct: 448 FVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 480
>gi|307171941|gb|EFN63567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Camponotus floridanus]
Length = 507
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G+ E L I + + CPF+ K G CR+GD CS+ H R +S +L+ Y
Sbjct: 151 YIDNGMKTPEALREIIDNQPSKDICPFFTKTGVCRYGDMCSKNHRRVFLSKVILIPGFYT 210
Query: 112 RPDMITPGVDAQ---GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + G + + HF FYED+ + L FG+I+ L C N H+ G
Sbjct: 211 HFSLEKNSAEYDTDIGLEFENSETWHHFRKFYEDVIKILELFGKIKTLKCCCNTELHLRG 270
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG-YCN 227
N+YV++ E +AA A L+G Y+ + + EF +T +R+A C C +G CN
Sbjct: 271 NLYVEYYTEREAARAWRHLKGYTYANKQLNCEFVNLTSWRKAICGM---TKCPKGSKACN 327
Query: 228 FMHV 231
F+H
Sbjct: 328 FLHT 331
>gi|322795207|gb|EFZ18029.1| hypothetical protein SINV_09275 [Solenopsis invicta]
Length = 470
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 7/184 (3%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+ G E L I + + CPF+ K G CR+G+ CS+ H + +S +L+ Y
Sbjct: 145 YIDNGAKTPEALRRIVDNQPSKEPCPFFTKTGVCRYGNACSKNHRKVFLSNVILIPGFYS 204
Query: 112 RPDMITPGVDAQ---GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIG 168
+ + + + +HF +F+ED+ EL FG I+ + C N+ H+ G
Sbjct: 205 HFSLQQHAEEYDTDVALEFENSETWQHFYEFFEDVITELESFGRIKVIKCCRNMEVHLRG 264
Query: 169 NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGG-YCN 227
N+YV++ E +AA A L+GR+Y G+ + EF + + A C + C +G YCN
Sbjct: 265 NLYVEYYTEREAARAWRNLKGRWYGGKRLHCEFVNLISWGGAICGIAQ---CPKGTKYCN 321
Query: 228 FMHV 231
F+H
Sbjct: 322 FLHT 325
>gi|85014399|ref|XP_955695.1| U2 small nuclear RNA auxillary factor [Encephalitozoon cuniculi
GB-M1]
gi|19171389|emb|CAD27114.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF)
[Encephalitozoon cuniculi GB-M1]
Length = 254
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 22/238 (9%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
R C FY K CR+G C+++H PT S +++ MY + P D + + +
Sbjct: 5 REACLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMY-----LYPKNDPE-STLGEESV 58
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
Q H + FYED F ELS K+G I L + N ++GN+Y++F EEE A + R+
Sbjct: 59 QIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRRY 118
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGR----YR 247
Y G+ I+ E + TC + E C +G C F+H + R L +L Y
Sbjct: 119 YGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSLVEELLASQALLYP 178
Query: 248 RRSRSRSFSP-----IPHLRSRHRRDGDRDYRRSYR-DRDYERSRRTHSRSSTSSRSR 299
R S + P IP + R GD + +YR DR RR + + S + R R
Sbjct: 179 RTSDANRIGPGPKDTIPRGKCPGRSLGDGTHDGNYRTDR-----RRLNDQESWTKRPR 231
>gi|167384024|ref|XP_001736783.1| splicing factor U2Af 38 kDa subunit [Entamoeba dispar SAW760]
gi|165900719|gb|EDR26968.1| splicing factor U2Af 38 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 251
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C F+ K+G+CRHGD C ++H P S T+LL +++ +ITP + QE
Sbjct: 7 CEFFSKVGSCRHGDICEKVHIIPQSSVTILLPHVWPAQQVITP------------QDQEQ 54
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
+E F+ D++ S FG++ + V +N A H+ GNV V+F E AA A+ LQG+ +S
Sbjct: 55 YEHFFFDLYTLCSGFGQVVDMIVSENQAPHLKGNVLVKFATEAMAAEAVKHLQGQLFSSV 114
Query: 196 PIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
+ + + D +E+ C+Q + C + CN++HV I
Sbjct: 115 VLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPI 153
>gi|242007963|ref|XP_002424784.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
gi|212508307|gb|EEB12046.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
Length = 408
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 52 FAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
F G + L ++ T + C F+ K+GACR G++CSR H IS TLL+SN Y
Sbjct: 146 FIQNGGDIPLELQAVSETNPGKEMCLFFNKVGACRFGNQCSRNHQHFKISNTLLVSNFYS 205
Query: 112 RPDMITPGVDAQGQPI----DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMI 167
+ I + + HF++FY DI E KFG++ + VC N H+
Sbjct: 206 HFTLEQNKSSEYDTDIILEYEDSDMYSHFKEFYTDIVPEFKKFGDLTMVKVCCNSEPHLR 265
Query: 168 GNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCN 227
GNVY++++ ++ A A QGR+Y D+ A C F C +G CN
Sbjct: 266 GNVYIEYKHKKDALLAYKEFQGRWYG------------DWGGAVCGDFARRRCLKGKSCN 313
Query: 228 FMHV 231
F+HV
Sbjct: 314 FLHV 317
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
+D+ NCPFY K G CR G RCSRLH + TLL+ +MY + V++ + D
Sbjct: 1 QDKRNCPFYIKTGVCRFGVRCSRLHPVFNEACTLLMRSMYTGAGLALEQVESL-EYTDEE 59
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
QE +E+FY+D+ E +FGE+ VC N + H+ GNVYV + +E A A + + GR
Sbjct: 60 VAQE-YEEFYDDVHSEFIQFGELVNFKVCRNGSPHLRGNVYVHYASQESAMLAYNHMNGR 118
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMH 230
FY+ + +++ A C C+ G CNFMH
Sbjct: 119 FYAKKQVVLPRGWKICDILACCFWSTVQTCSHGSACNFMH 158
>gi|449330260|gb|AGE96520.1| u2 snrnp auxiliary factor small subunit [Encephalitozoon cuniculi]
Length = 254
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
R C FY K CR+G C+++H PT S +++ MY + P D + + +
Sbjct: 5 REACLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMY-----LYPKNDPE-STLGEESV 58
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
Q H + FYED F ELS K+G I L + N ++GN+Y++F EEE A + R+
Sbjct: 59 QIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRRY 118
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGR----YR 247
Y G+ I+ E + TC + E C +G C F+H + R L +L Y
Sbjct: 119 YGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSLVEELLASQALLYP 178
Query: 248 RRSRSRSFSP-----IPHLRSRHRRDGDRDYRRSYR 278
R S + P IP + R GD + +YR
Sbjct: 179 RTSDANRIGPGPKDTIPRGKCPGRSLGDGTHDGNYR 214
>gi|401828573|ref|XP_003888000.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
gi|392999008|gb|AFM99019.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
Length = 257
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C FY K CR+G C++ H P+ S +++ NMY P V + +Q H
Sbjct: 8 CIFYSKTNGCRYGLECTKAHRIPSRSKVVVIKNMYLYPRNDPESV------LSKDAVQIH 61
Query: 136 FEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
+ FYED F E+S K+G + L + N++ ++GN+Y++F EE A + + R+Y G
Sbjct: 62 LDLFYEDWFSEMSVKYGAVRMLAIASNISPQLLGNIYIEFEEERAALRCMEEIGKRYYCG 121
Query: 195 RPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYR 247
+ I+VE + C E++ C +G C F+HV L +L R
Sbjct: 122 KRIVVELGNCYRISDGVCTDHEKDLCAKGERCGFIHVAKATASLVEELLASQR 174
>gi|238879030|gb|EEQ42668.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
Q+ F+ F++DIF +SK G+I + VC+N +H+ GNVYV F E A A L ++
Sbjct: 208 QKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWF 267
Query: 193 SGRPIIVEFSPVTDFREATCRQFEE-NNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSR 251
+G+P+ + SPV DF +A C ++ + ++C RG CN+MHV+L D+ L Y +++
Sbjct: 268 NGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESL---YESQAK 324
Query: 252 SRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSST 294
S + L +++ D R S D E + + SST
Sbjct: 325 SYMLKQLEEL----KKELPGDIRSSSSTNDDETNGNENGISST 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
V C FY KIGACRHG++CS+ H +P S T+LL+N+YQ P +
Sbjct: 20 VLCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNPTL 61
>gi|68490905|ref|XP_710740.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490926|ref|XP_710731.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431969|gb|EAK91483.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431979|gb|EAK91492.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 371
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
Q+ F+ F++DIF +SK G+I + VC+N +H+ GNVYV F E A A L ++
Sbjct: 208 QKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWF 267
Query: 193 SGRPIIVEFSPVTDFREATCRQFEE-NNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSR 251
+G+P+ + SPV DF +A C ++ + ++C RG CN+MHV+L D+ L Y +++
Sbjct: 268 NGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESL---YESQAK 324
Query: 252 SRSFSPIPHLRSRHRRDGDRDYRRSYRDRDYERSRRTHSRSST 294
S + L +++ D R S D E + + SST
Sbjct: 325 SYMLKQLEEL----KKELPGDIRSSSSTNDDETNGNENGISST 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
V C FY KIGACRHG++CS+ H +P S T+LL+N+YQ P +
Sbjct: 20 VLCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNPTL 61
>gi|198475533|ref|XP_001357071.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
gi|198138864|gb|EAL34137.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
Length = 448
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 61 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV 120
+HL + T + C F+ + +CR+G C+ H RP + LL+ + + + V
Sbjct: 154 DHLLRMVETHPEERPCEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKV 213
Query: 121 DAQ------GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
+ G + ++ +++F+ D EL KFG+I N +H+ G+V+V++
Sbjct: 214 HKEYASADEGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEY 273
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV--- 231
E+ A A LQGR+Y+ R + VEFS + +R A C C +G C ++H+
Sbjct: 274 ANEKCALRAFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHLFRN 333
Query: 232 --KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYR 278
L +DL + R +R+ SP+P S + DGD D R++R
Sbjct: 334 PNNLFNKDLE---YTNTPRSARNSGKSPMPKTPSWN--DGDDDRARNWR 377
>gi|195159884|ref|XP_002020806.1| GL14474 [Drosophila persimilis]
gi|194117756|gb|EDW39799.1| GL14474 [Drosophila persimilis]
Length = 448
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 61 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGV 120
+HL + T + C F+ + +CR+G C+ H RP + LL+ + + + V
Sbjct: 154 DHLLRMVETHPEERPCEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKV 213
Query: 121 DAQ------GQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
+ G + ++ +++F+ D EL KFG+I N +H+ G+V+V++
Sbjct: 214 HKEYASGDEGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEY 273
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV--- 231
E+ A A LQGR+Y+ R + VEFS + +R A C C +G C ++H+
Sbjct: 274 ANEKCALRAFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHLFRN 333
Query: 232 --KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYR 278
L +DL + R +R+ SP+P S + DGD D R++R
Sbjct: 334 PNNLFNKDLE---YTNTPRSARNSGKSPMPKTPSWN--DGDDDRARNWR 377
>gi|42572579|ref|NP_974385.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332644432|gb|AEE77953.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 75
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
M EHLASI+GTEKDRVNCPFYFKIG CR+GDRCSRL+ +P+ISPTLLLSN YQ+ +
Sbjct: 1 MVEHLASIYGTEKDRVNCPFYFKIGVCRNGDRCSRLYTKPSISPTLLLSNTYQQGRLKQF 60
Query: 119 GVDAQGQPIDPRK 131
Q + DP+K
Sbjct: 61 LDPVQSREKDPKK 73
>gi|149043575|gb|EDL97026.1| rCG60540, isoform CRA_c [Rattus norvegicus]
Length = 85
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 118
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 119 GVDA 122
D
Sbjct: 61 TADG 64
>gi|50949477|emb|CAH10401.1| hypothetical protein [Homo sapiens]
Length = 67
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 50/55 (90%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNP 55
>gi|67476636|ref|XP_653880.1| U2 snRNP auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56470879|gb|EAL48494.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407039409|gb|EKE39628.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
gi|449708002|gb|EMD47542.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 251
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C F+ K+G+CRHG+ C ++H P S T+LL +++ +ITP + QE
Sbjct: 7 CEFFSKVGSCRHGNICEKVHITPHSSVTILLPHVWPAQQVITP------------QDQEQ 54
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
+E F+ D++ S FG++ + V +N A H+ GNV V+F E A A+ LQG+ +
Sbjct: 55 YEHFFFDLYTLCSGFGKVVDMIVSENQASHLKGNVLVKFATEAMAEEAIKHLQGQLFGSV 114
Query: 196 PIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLI 234
+ + + D +E+ C+Q + C + CN++HV I
Sbjct: 115 VLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPI 153
>gi|302775180|ref|XP_002971007.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
gi|300160989|gb|EFJ27605.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
Length = 132
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
+D+ +CPF+ K GACR G RCSRLH P S TLL+ NMY P + +G
Sbjct: 2 QDKTHCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGLAWE--HDEGLECTDE 59
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+I+E FE+FYED+ E KFGE+ VC N + H+ GNVYV ++ EE A AA AL GR
Sbjct: 60 EIEEKFEEFYEDVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEEDAVAACLALSGR 119
Query: 191 FYSGRPIIVEFS 202
FY+ + ++ +S
Sbjct: 120 FYASKQVLARYS 131
>gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER
Length = 104
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 101 SPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS-KFGEIECLNVC 159
S T+ L N+Y+ P + D + ++QEH+++F+E++F E+ K+GE+E +NVC
Sbjct: 1 SQTIALLNIYRNPQNSSQSADGLRSAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVC 60
Query: 160 DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSP 203
DNL DH++GNVYV+FR EE A A+ L R+++G+PI E SP
Sbjct: 61 DNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSP 104
>gi|241948837|ref|XP_002417141.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
gi|223640479|emb|CAX44731.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
Length = 372
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+I++ F+ FY+DIF ++K G+I + VC+N +H+ G+VYV+F + E A A L
Sbjct: 206 QIRKDFDLFYQDIFVHIAKLGQINDMAVCEN-ENHLSGHVYVKFNDYEDAYNANLQLNQE 264
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRS 250
+Y+GRPI E SPV +A C ++ +CNRG CN++HVK + ++ L+ S
Sbjct: 265 WYNGRPIYSELSPVNSISDAHCSAWDHGHCNRGATCNYLHVKQPTQGMKKSLYD-----S 319
Query: 251 RSRSFS 256
+S+S++
Sbjct: 320 QSKSYT 325
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
K V C FY +IGACRHG++C++ H RPT + T+L+ N+YQ P
Sbjct: 21 KSTVLCSFYTRIGACRHGEKCTKKHLRPTSTKTILIPNLYQNP 63
>gi|258575975|ref|XP_002542169.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
gi|237902435|gb|EEP76836.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
Length = 139
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 32/156 (20%)
Query: 117 TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
P D + + ++P ++Q HF+ FYED++ ++IGNVY +F+
Sbjct: 4 NPAFDPKNK-MNPSQLQNHFDAFYEDLW--------------------YLIGNVYARFKY 42
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK---- 232
E+ A A AL R+Y+ RPI E SPVTDFREA CR C RGG+CNF+H K
Sbjct: 43 EDSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSA 102
Query: 233 LIGRDLR------NKLFGRYRRRSRSRSFSPIPHLR 262
+ RDL K+ GR RS SRS SP P R
Sbjct: 103 ELERDLELSTKKWLKMRGR-DERSASRSPSPEPGKR 137
>gi|68490634|ref|XP_710864.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490659|ref|XP_710852.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432105|gb|EAK91608.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432119|gb|EAK91621.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 377
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D + +IQ+ F+ FY+DIF ++K G+I + VC+N +H+ G+VY++F +
Sbjct: 201 GLDENHPVLTDEQIQKDFDLFYQDIFVHVAKLGQINDMAVCEN-ENHLSGHVYIKFNDYN 259
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AA L +Y+G+P+ E SPV +A C+ ++ +C+RG CN++HVK + +
Sbjct: 260 DAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGI 319
Query: 239 RNKLF 243
+ L+
Sbjct: 320 KKSLW 324
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
K V C FY KIG+CRHG+ CS+ H +PTI+ T+LL N+YQ P
Sbjct: 11 KTAVLCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNP 53
>gi|238879039|gb|EEQ42677.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 377
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 119 GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 178
G+D + +IQ+ F+ FY+DIF ++K G+I + VC+N +H+ G+VY++F +
Sbjct: 201 GLDENHPVLTDEQIQKDFDLFYQDIFVHVAKLGQINDMAVCEN-ENHLSGHVYIKFNDYN 259
Query: 179 QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 238
A AA L +Y+G+P+ E SPV +A C+ ++ +C+RG CN++HVK + +
Sbjct: 260 DAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGI 319
Query: 239 RNKLF 243
+ L+
Sbjct: 320 KKSLW 324
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP 113
K V C FY KIG+CRHG+ CS+ H +PTI+ T+LL N+YQ P
Sbjct: 11 KPAVLCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNP 53
>gi|444322338|ref|XP_004181817.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
gi|387514862|emb|CCH62298.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
Length = 213
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 17/198 (8%)
Query: 33 IDKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCS 92
I+ L+ S K S K G +A A + E + +C F+++IGACR+ +C
Sbjct: 15 IESLTTTNISSNVK-SHTKSNGNTIANAITPLNKGLKEDNNDHCFFFYEIGACRYNSKCI 73
Query: 93 RLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGE 152
+ H RPT S ++L N+ +D + ++ F+ Y+DIF E KFG+
Sbjct: 74 KKHIRPTRSNCIVLLNL----------IDLK---LNTEVTNYAFDSIYQDIFLEAMKFGK 120
Query: 153 IECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
I L + N D + GNVY+++ + A A++ R+Y RPI + + ++ E TC
Sbjct: 121 ILSLEISVNENDCLNGNVYIKYLNDSIARDAMNNFNTRWYDERPI---YCDLVNYNEGTC 177
Query: 213 RQFEENNCNRGGYCNFMH 230
R+++ NC RG C +H
Sbjct: 178 RRYDNGNCARGPECTLLH 195
>gi|123455079|ref|XP_001315287.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897959|gb|EAY03064.1| hypothetical protein TVAG_171620 [Trichomonas vaginalis G3]
Length = 241
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
+K+ C + K G C GDRC+++H P ++ T++ +++ PD + +
Sbjct: 7 DKEPGMCSIFEKTGCCPKGDRCNKVHFIPAMARTVIFHHIFPNPDFFIQCLPDGVITMSA 66
Query: 130 RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
++ Q + + F+ D+F +FG IE L +C N D + GN YV + + + A AL AL G
Sbjct: 67 QEKQRYIDAFFLDMFLMCRRFGAIEDLLLCSNTMDCLSGNFYVFYEQSDCARMALTALDG 126
Query: 190 RFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
++Y+GR + V V + A C+ + C+RG C F+H
Sbjct: 127 QYYAGRKVHVTLCSVPRYSTALCKSSMKGECSRGNECAFIHA 168
>gi|345315324|ref|XP_001512892.2| PREDICTED: hypothetical protein LOC100082198, partial
[Ornithorhynchus anatinus]
Length = 384
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 142 DIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
++F EL K+GEIE +NVCDNL DH++GNVYV+FR EE A A+ L R+++G+ + E
Sbjct: 1 EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVSELNNRWFNGQAVQAE 60
Query: 201 FSPVTDFREATCRQFEENNC 220
SPVTDFRE+ CRQ+E
Sbjct: 61 LSPVTDFRESCCRQYEMGTA 80
>gi|195386482|ref|XP_002051933.1| GJ24411 [Drosophila virilis]
gi|194148390|gb|EDW64088.1| GJ24411 [Drosophila virilis]
Length = 449
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Query: 63 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDA 122
L + T + C FY + CR+G C+ H RP ++ LL+ + Y P +
Sbjct: 157 LRRVVETHPEERLCEFYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFYTHPLLQVDATHK 216
Query: 123 QGQPIDPR-KIQEH-----FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ D ++ +H +++F++D EL KFG+I N H+ G+V+V++
Sbjct: 217 EYAGADEHLELTQHDLRADYDEFFKDATGELEKFGKIVNFRTVCNTLPHLRGHVFVEYAH 276
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236
E A A LQGR+Y+ R + VEFS + +R A C C +G C ++H+
Sbjct: 277 ERFALRAFINLQGRYYAARRLNVEFSNLKAWRGAVCGLSLTRKCPKGYSCGYLHLFRNPN 336
Query: 237 DLRNKLFGRYRRRSRSRSFSPIP 259
+L N Y +RS S P
Sbjct: 337 NLFNSSLEPYGTPGSARSVSRTP 359
>gi|123433241|ref|XP_001308579.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890266|gb|EAX95649.1| hypothetical protein TVAG_045370 [Trichomonas vaginalis G3]
Length = 206
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
++++ C + K G C G+ C++ H +S LL ++Y PD+ + A I
Sbjct: 3 EEKLFCLQFEKTGVCLKGEMCNKPHRSDPMSRVLLFKHLYPDPDVFLSLLPAGSVTISDE 62
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+ Q + FY DIF +FG +E + + N D M GNVYV F+E + A AA L +
Sbjct: 63 EKQRAADAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLNLNNQ 122
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRR 248
+Y+GR + +P++ A C E +C G CN++H I + F R R
Sbjct: 123 YYAGRKVECVLTPISRLSNAICN---ETSCPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|294887769|ref|XP_002772227.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239876261|gb|EER04043.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 53
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 45/53 (84%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR HNRP S T+LL MYQ
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQ 53
>gi|123474570|ref|XP_001320467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903273|gb|EAY08244.1| hypothetical protein TVAG_404120 [Trichomonas vaginalis G3]
Length = 225
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Query: 76 CPFYFKIGACRHG---DRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP-IDPRK 131
C Y K GAC + C H +S L+ ++Y PD + Q I R
Sbjct: 27 CQIYEKTGACPNDYFPKCCPFKHPIKLMSRCLVFHHLYPNPDYFASFLPKNEQTMIKTRN 86
Query: 132 IQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
+Q + F+ D++ E +FG ++ + + NL +H+ GNVYV+F E ++A A ALQGRF
Sbjct: 87 LQSMIDSFFLDVYAEFKQFGNVQDIVIASNLTEHLYGNVYVRFNEPDEALACHKALQGRF 146
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRRRSR 251
Y+GR + C + C G C ++H I RD+ N+ F R +
Sbjct: 147 YAGRKVTSSLIFFDKLSSLICVSKQSGKCFHGQCCPYVHPLQISRDVFNQAFPRILLSTP 206
Query: 252 SRSFSPIP 259
S + P
Sbjct: 207 SALLTNTP 214
>gi|254576833|ref|XP_002494403.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
gi|238937292|emb|CAR25470.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
Length = 137
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 120 VDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQ 179
V+ + IDP+ F+ YEDI+ E +FG + + +C+N DH+ GNVY+ + E+
Sbjct: 2 VNFSPEGIDPQD----FDALYEDIYMEACRFGPVRSMVICENRNDHLKGNVYLYYEREQD 57
Query: 180 AAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVK 232
A A + R++ RP+ + + V DFREA CR+ + C RGG CNFMHV+
Sbjct: 58 AEDAKNNFNTRWFDERPLYCDLTHVADFREAVCRKHDLGTCERGGDCNFMHVR 110
>gi|149035842|gb|EDL90509.1| similar to U2af1-rs2 (predicted) [Rattus norvegicus]
Length = 337
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
+ F DFY D+ E G++ V NL H+ GNVYVQ++ EE AA GR+Y+
Sbjct: 30 QQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYA 89
Query: 194 GRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
GR + EF PVT ++ A C FE C RG +CNF+HV
Sbjct: 90 GRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 127
>gi|123437829|ref|XP_001309706.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891444|gb|EAX96776.1| hypothetical protein TVAG_216790 [Trichomonas vaginalis G3]
Length = 206
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPR 130
++++ C + K G C G+ C++ H +S LL ++Y PD+ + I
Sbjct: 3 EEKLFCLQFEKTGVCLKGEMCNKPHRSDPMSRILLFKHLYPDPDVFLALLPTGSVTISDE 62
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+ Q + FY DIF +FG +E + + N D M GNVYV F+E + A AA L +
Sbjct: 63 EKQRAADAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTLNNQ 122
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRYRR 248
+Y+GR + +P++ A C E+ C G CN++H I + F R R
Sbjct: 123 YYAGRKVECVLTPISRLSNAICN---ESACPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|221472666|ref|NP_608857.2| CG3294, isoform A [Drosophila melanogaster]
gi|220901945|gb|AAF50982.3| CG3294, isoform A [Drosophila melanogaster]
Length = 456
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 62 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLL------SNMYQRPDM 115
HL + T + C F+ + CR+G C+ H RP + LL+ S + +R
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTH 215
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ + + ++ +++F+ D+ EEL KFG I N +H+ G+V+V++
Sbjct: 216 KEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
E A A LQGR+Y+ + + VEFS + +R A C C +G C ++H+
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHL 331
>gi|195433120|ref|XP_002064563.1| GK23757 [Drosophila willistoni]
gi|194160648|gb|EDW75549.1| GK23757 [Drosophila willistoni]
Length = 589
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C F+ + CR G CS H RP ++ LL+ + + P + D + + +++
Sbjct: 173 CEFFTRTNCCRFGHTCSHNHRRPMLAKILLIRHFFSHPLLKLTSSDDYLE-LTEHDLRDS 231
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
+++F+ D EL KFG+I N D++ G+V+V++ +E A A LQGR+Y+ R
Sbjct: 232 YDEFFHDAVAELEKFGKIVNFRALRNTLDYLRGHVFVEYAQERHALRAFINLQGRYYASR 291
Query: 196 PIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
+ VEFS + +R A C G C ++H+
Sbjct: 292 QLNVEFSNLKGWRGAVC----------GYSCAYLHL 317
>gi|344249745|gb|EGW05849.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Cricetulus griseus]
Length = 138
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ-------RPDMITPGVDA 122
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ R D P
Sbjct: 28 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSL 87
Query: 123 QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ + + F DFY D+ E G++ V NL H+ GNVYVQ++
Sbjct: 88 E---YSEEETYQQFLDFYHDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQ 137
>gi|303390771|ref|XP_003073616.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
gi|303302763|gb|ADM12256.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
Length = 245
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 73 RVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
R C FY K ACR+G C++ H P +++ MY + P D + + I
Sbjct: 5 RDTCLFYSKTNACRYGLECTKAHRIPIRGKVVVVKGMY-----LYPKNDPE-STLSKESI 58
Query: 133 QEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
Q H + FYED F ELS ++G I L + N + ++GN+Y++F EE+ A + + R+
Sbjct: 59 QIHLDLFYEDWFSELSIRYGSIRRLVIASNSSSQLLGNIYIEFEEEKTALRCVEEIGKRY 118
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLF 243
YSGR I E + C E+ C +G C F+H + DL +LF
Sbjct: 119 YSGRRIAAELGNCYRIDDGMCTDNEKEKCEKGEKCGFIHSARVSTDLAEELF 170
>gi|195576588|ref|XP_002078157.1| GD23299 [Drosophila simulans]
gi|194190166|gb|EDX03742.1| GD23299 [Drosophila simulans]
Length = 492
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 62 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM----IT 117
HL + T + C F+ + CR+G C+ H RP + LL+ + + +
Sbjct: 156 HLLRVMETHPEERPCEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWAH 215
Query: 118 PGVDAQGQPID--PRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
D+ + ++ + ++ +++F+ D EEL KFG I N +H+ G+V+V++
Sbjct: 216 KEYDSAEEHLELTEQDLRHDYDEFFNDAVEELGKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
E A A LQGR+Y+ + + VEFS + +R A C C +G C ++H+
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNGCGYLHL 331
>gi|195035213|ref|XP_001989072.1| GH11518 [Drosophila grimshawi]
gi|193905072|gb|EDW03939.1| GH11518 [Drosophila grimshawi]
Length = 312
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 63 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDA 122
L + T + C FY + CR+G C+ H RP ++ LL+ + + P +
Sbjct: 155 LQRVLETHPEERLCEFYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFFTHPLLQIGDTHK 214
Query: 123 QGQPID------PRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176
+ D P+ ++ ++ F+ D+ +EL KFG+I V N H+ G+V+V++ +
Sbjct: 215 EYANADAHLEQTPQDLRADYDAFFNDVVDELQKFGKIINFRVVCNTLPHLRGHVFVEYAQ 274
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
E A A LQGR+Y+ R + VEFS + +R A C
Sbjct: 275 ERYALRAFVNLQGRYYASRRLNVEFSNLKAWRGAVC 310
>gi|13235102|emb|CAC33544.1| U2snRNP auxiliary factor small subunit (truncated) [Gallus gallus]
Length = 49
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLL 106
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S +L
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEAML 48
>gi|194766159|ref|XP_001965192.1| GF21431 [Drosophila ananassae]
gi|190617802|gb|EDV33326.1| GF21431 [Drosophila ananassae]
Length = 314
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 62 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD 121
HL I T C + + CR+G C+ H RP +S LL+ + + + V
Sbjct: 156 HLLRIMETHPGERVCELFSRTNCCRYGHSCTFNHTRPMLSRILLIRHFFSHSLLQERRVH 215
Query: 122 AQGQPIDPR-KIQEH-----FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ D ++ EH F++F+ED +EL KFG I N +H+ G+V+V++
Sbjct: 216 KEYASADEELELTEHDLRSDFDEFFEDAIKELEKFGSIVNFRAVRNTLEHLRGHVFVEYG 275
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
E A A LQGR+Y+ R + VEFS + +R A C
Sbjct: 276 HERSALRAFINLQGRYYASRRLNVEFSNLKTWRGAVC 312
>gi|194856250|ref|XP_001968707.1| GG25018 [Drosophila erecta]
gi|190660574|gb|EDV57766.1| GG25018 [Drosophila erecta]
Length = 447
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 63 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY-------QRPDM 115
L + T + C F+ + CR+G C+ H RP ++ LL+ + + +RP
Sbjct: 157 LLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLARILLIRHFFNHSMLQERRPHK 216
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ + + + ++ +++F+ D EEL KFG I N +H+ G+V+V++
Sbjct: 217 EYASAEEHLE-LTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTVEHLRGHVFVEYT 275
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV---- 231
E A A LQGR+Y+ + + VEFS + +R A C G C ++H+
Sbjct: 276 NERSALRAFTNLQGRYYASKKLNVEFSNLKTWRGAVC----------GNGCGYLHLFGNP 325
Query: 232 -KLIGRDLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYR 278
L +L R +RRS + P DG + R++R
Sbjct: 326 NNLYNTELEYTTGPRSQRRSSQTPTAKTPSW------DGHNQHGRNWR 367
>gi|195471335|ref|XP_002087960.1| GE18306 [Drosophila yakuba]
gi|194174061|gb|EDW87672.1| GE18306 [Drosophila yakuba]
Length = 496
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 62 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLL------SNMYQRPDM 115
HL + T + C F+ + CR+G C+ H RP ++ LL+ S + +R
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLARILLIRHFFNHSMLQERRAH 215
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ + + ++ +++F+ D EEL KFG I N +H+ G+V+V++
Sbjct: 216 KEYAAAEEHLELTEQDLRHDYDEFFRDAVEELEKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
E A A LQGR+Y+ + + VEFS + +R A C G C ++H+
Sbjct: 276 SERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHL 321
>gi|256070881|ref|XP_002571770.1| arylformamidase [Schistosoma mansoni]
gi|353228669|emb|CCD74840.1| putative kynurenine aminotransferase [Schistosoma mansoni]
Length = 967
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPT----ISPTLLLSN----------------MYQRPDM 115
C F+ K GACR+G CSRLH P+ I + +++ + Q P M
Sbjct: 175 CSFFRKTGACRYGFLCSRLHQYPSRYDDIIESFNIADDQDVGGLDEPIDNSCLVLQIPKM 234
Query: 116 -------ITPGVDAQ----GQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLA 163
+T ++ G +D ++ + +FY D+ EL S++G+I + C NLA
Sbjct: 235 FTHYHLDLTKNTSSEDQDSGLEVDESQLLSDYHEFYHDVRMELESRWGKISVIRTCRNLA 294
Query: 164 DHMIGNVYVQFREEEQAAA-ALHALQGRFYSGRPIIVEFSPV-TDFREATCRQFEENNCN 221
DH+ G+VYV+F AA A A GR+++GR + + +REA C + C
Sbjct: 295 DHLRGSVYVEFSRGPSAAWDAAEACNGRWFAGRKLTCTVVRLGGGWREAICGLYHRGKCP 354
Query: 222 RGG-YCNFMHVKL----IGRDLRNKLFGRYRRRSRSRSFSPI 258
+G +CNF+HV L DL+ L+ R R SP+
Sbjct: 355 KGDLHCNFLHVFLNPGETSNDLQKTLW-----RHVGRLISPV 391
>gi|443697246|gb|ELT97781.1| hypothetical protein CAPTEDRAFT_161525 [Capitella teleta]
Length = 346
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 132 IQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRF 191
+ HF +FYED+ E G + VC N H+ GNVY+Q+ E A L A GR+
Sbjct: 28 VMRHFREFYEDVTPEFRALGRLVQFKVCCNYEPHLRGNVYIQYESESDAERCLSAFNGRW 87
Query: 192 YSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
Y+GR + ++S VT ++ A C F C +G CNF+HV
Sbjct: 88 YAGRQLSCQYSAVTQWKNAICGLFSRKKCPKGRACNFLHV 127
>gi|195342524|ref|XP_002037850.1| GM18489 [Drosophila sechellia]
gi|194132700|gb|EDW54268.1| GM18489 [Drosophila sechellia]
Length = 447
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 62 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM----IT 117
HL + T + C F+ + CR+G C+ H RP + LL+ + + +
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWTH 215
Query: 118 PGVDAQGQPID--PRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
D+ + ++ + ++ +++F+ D EEL KFG I N +H+ G+V+V++
Sbjct: 216 KEYDSAEEHLELTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
E A A LQGR+Y+ + + VEFS + +R A C G C ++H+
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHL 321
>gi|325187017|emb|CCA21561.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 341
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 74 VNCPFYFKIGACRHGD-RCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
++CPFY + G C G RC R H P S LLL + +D +
Sbjct: 160 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHF----------------CLDEILV 203
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
+ ++ ELS+ + + + NLA H+ GNVY++F EE A A AL+ R+Y
Sbjct: 204 DGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYY 263
Query: 193 SGRPIIVEFSPVTDFREATCRQFEENNCNRGG-YCNFMHV 231
GR + E P+ ++ + C F + C +G CN++H+
Sbjct: 264 KGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 303
>gi|224129496|ref|XP_002328731.1| predicted protein [Populus trichocarpa]
gi|222839029|gb|EEE77380.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
+E+FYED+ E K+GEI VC N + H+ GNVYV ++ + A A H++ GR+++G+
Sbjct: 27 YEEFYEDVHTEFLKYGEIVNFKVCKNGSFHLRGNVYVHYKSLDSAILAYHSINGRYFAGK 86
Query: 196 PIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+ EF +T ++ A C +F ++ C+ G CNF+H
Sbjct: 87 QVKCEFINLTRWKVAICGEFMKSRLKTCSHGSACNFIH 124
>gi|326523703|dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 131 KIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+I++ +E+FYED+ E KFGE+ VC N + H+ GNVYV ++ + A A +++ GR
Sbjct: 6 EIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKALDSALLAYNSMNGR 65
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMHV 231
+++G+ I EF +T ++ A C ++ + C+ G CNF+H
Sbjct: 66 YFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSHGVACNFIHC 109
>gi|325187018|emb|CCA21562.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 74 VNCPFYFKIGACRHGD-RCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
++CPFY + G C G RC R H P S LLL + +D +
Sbjct: 133 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFC----------------LDEILV 176
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
+ ++ ELS+ + + + NLA H+ GNVY++F EE A A AL+ R+Y
Sbjct: 177 DGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYY 236
Query: 193 SGRPIIVEFSPVTDFREATCRQFEENNCNRGG-YCNFMHV 231
GR + E P+ ++ + C F + C +G CN++H+
Sbjct: 237 KGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 276
>gi|197127860|gb|ACH44358.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 42
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 40/42 (95%)
Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTI 100
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+P I
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPNI 42
>gi|325187019|emb|CCA21563.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 301
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 74 VNCPFYFKIGACRHGD-RCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
++CPFY + G C G RC R H P S LLL + +D +
Sbjct: 120 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFC----------------LDEILV 163
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
+ ++ ELS+ + + + NLA H+ GNVY++F EE A A AL+ R+Y
Sbjct: 164 DGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYY 223
Query: 193 SGRPIIVEFSPVTDFREATCRQFEENNCNRGG-YCNFMHV 231
GR + E P+ ++ + C F + C +G CN++H+
Sbjct: 224 KGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 263
>gi|405978554|gb|EKC42934.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Crassostrea gigas]
Length = 729
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 13/118 (11%)
Query: 66 IFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ--------RPDMIT 117
I GTE R C F+ K G CR GDRCSR H P +S TLL +MY + D+ T
Sbjct: 506 IPGTE--RETCMFFSKTGTCRFGDRCSRGHPHPEVSNTLLFHSMYNHFELEQGLKDDLDT 563
Query: 118 PGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
V + D ++ ++F+DFY DI E +G++ + VC+N H+ GNVYVQ++
Sbjct: 564 TDVTLE---YDDGELYQNFQDFYLDIVPEFRNYGKLSQVKVCNNYEPHLRGNVYVQYK 618
>gi|21483354|gb|AAM52652.1| GM14666p [Drosophila melanogaster]
Length = 321
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 62 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLL------SNMYQRPDM 115
HL + T + C F+ + CR+G C+ H RP + LL+ S + +R
Sbjct: 163 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTH 222
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ + + ++ +++F+ D+ EEL KFG I N +H+ G+V+V++
Sbjct: 223 KEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 282
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
E A A LQGR+Y+ + + VEFS + +R A C
Sbjct: 283 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 319
>gi|28574034|ref|NP_787976.1| CG3294, isoform B [Drosophila melanogaster]
gi|28380246|gb|AAO41150.1| CG3294, isoform B [Drosophila melanogaster]
Length = 314
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 62 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLL------SNMYQRPDM 115
HL + T + C F+ + CR+G C+ H RP + LL+ S + +R
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTH 215
Query: 116 ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFR 175
+ + + ++ +++F+ D+ EEL KFG I N +H+ G+V+V++
Sbjct: 216 KEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 176 EEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
E A A LQGR+Y+ + + VEFS + +R A C
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|157141689|ref|XP_001647741.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 [Aedes aegypti]
gi|108867907|gb|EAT32409.1| AAEL015434-PA, partial [Aedes aegypti]
Length = 296
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 104 LLLSNMYQRPDMITPGVDAQGQP---------IDPRKIQEHFEDFYEDIFEELSKFGEIE 154
LLL N + P +D Q P D ++ + +F+ D+ EE FG I
Sbjct: 2 LLLPNFFAHP-----ALDHQQHPEYGLDSSIEFDDDELYRSYTEFFMDVIEEFESFGPIS 56
Query: 155 CLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQ 214
V N H+ GNVYVQ+ + AA A + GRFY+ + + VEF + A C
Sbjct: 57 GFFVTRNFEPHLRGNVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVCGL 116
Query: 215 FEENNCNRGGYCNFMHV 231
FE + C +G CN++H+
Sbjct: 117 FERSRCQKGKSCNYLHL 133
>gi|357445231|ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1146
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
FE+FYED+ E KFGEI VC N + H+ GNVYVQ++ + A A +++ GR+++G+
Sbjct: 15 FEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGRYFAGK 74
Query: 196 PIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+ +F +T ++ A C ++ ++ C+ G CNF+H
Sbjct: 75 QVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 112
>gi|140053486|gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
FE+FYED+ E KFGEI VC N + H+ GNVYVQ++ + A A +++ GR+++G+
Sbjct: 13 FEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGRYFAGK 72
Query: 196 PIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+ +F +T ++ A C ++ ++ C+ G CNF+H
Sbjct: 73 QVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 110
>gi|195114372|ref|XP_002001741.1| GI17015 [Drosophila mojavensis]
gi|193912316|gb|EDW11183.1| GI17015 [Drosophila mojavensis]
Length = 170
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP------ 129
C FY + CR+G+ C+ H RP ++ LL+ + + P + + D
Sbjct: 26 CEFYTRTNCCRYGNSCTFNHRRPMLAKILLIRHFFTHPLLQVGETHKEYASTDEHLELTE 85
Query: 130 RKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ ++ +++F+ D EL KFG+I N H+ G+V+V++ +E A A LQG
Sbjct: 86 QDLRNDYDEFFNDAIGELQKFGKILNFRAVRNTLPHLRGHVFVEYAQERFALRAFVNLQG 145
Query: 190 RFYSGRPIIVEFSPVTDFREATC 212
R+Y+ R + VEFS + +R A C
Sbjct: 146 RYYASRRLQVEFSNLKGWRGAVC 168
>gi|239505105|gb|ACR78698.1| U2 small nuclear auxiliary factor 1 [Rimicaris exoculata]
Length = 53
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 57 LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNM 109
++ AE+LASI+GTEKD+VNC FY K GACRH +RCSR HN+P S T+++ NM
Sbjct: 1 MSGAEYLASIYGTEKDKVNCSFYIKTGACRHSERCSRKHNKPQYSQTVVMQNM 53
>gi|359082061|ref|XP_003588255.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 130
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP 129
EKDR NCPFY K GACR GDRCSR HN PT SPTLL+ +M+ M G D DP
Sbjct: 28 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDD----YDP 83
Query: 130 --------RKIQEHFEDFYEDIFEELSKFGEI 153
+I + F DFY+D+ E G++
Sbjct: 84 DANLEYSEEEIYQQFLDFYDDVLPEFKNVGKV 115
>gi|156379393|ref|XP_001631442.1| predicted protein [Nematostella vectensis]
gi|156218482|gb|EDO39379.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
E +E+F+ D+ E K G++ C N H+ GNVYVQF++EE A A A GR+Y+
Sbjct: 13 ERYEEFFNDVLPEFEKAGKVVQFKACCNYEPHLRGNVYVQFKDEESCARAFAAFNGRWYA 72
Query: 194 GRPIIVEFSPVTDFREATCRQF 215
+ + EFSPVT ++ A C +F
Sbjct: 73 QKQLSCEFSPVTRWKSAICDRF 94
>gi|413937280|gb|AFW71831.1| hypothetical protein ZEAMMB73_658558 [Zea mays]
Length = 272
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 69 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPID 128
++D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 174 IQEDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLEFT 231
Query: 129 PRKIQEHFEDFYEDIFEELSKFGEI 153
+I++ +E+FYED+ E KFGE+
Sbjct: 232 DEEIEQSYEEFYEDVHTEFLKFGEL 256
>gi|170038926|ref|XP_001847298.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
gi|167862539|gb|EDS25922.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
Length = 398
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 61 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRP---DMIT 117
E L + T C F+ KIG CR+G RCS H P +S LL+ N + P D
Sbjct: 152 ESLCQMVDTRPGANVCGFFGKIGVCRYGIRCSSNHPTPGLSQLLLIPNFFAHPALDDRNN 211
Query: 118 P--GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQF 174
P G D+ G D ++ + +F+ DI E FG I + VC N A H+ GNV++Q+
Sbjct: 212 PEYGTDS-GIEFDEDELYRCYNEFFHDIIAEFESFGLIRYIFVCRNHAVHLRGNVFIQY 269
>gi|325187016|emb|CCA21560.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRK------IQEHF------------EDF 139
P +S + ++ M+ + T + PI P + +HF E
Sbjct: 155 PCLSYIMSINLMWNLWNQGTAKSSSDFMPILPSDGSSKFLLLKHFCLDEILVDGSATELL 214
Query: 140 YEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
YE + ELS+ + + + NLA H+ GNVY++F EE A A AL+ R+Y GR +
Sbjct: 215 YE-MSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDA 273
Query: 200 EFSPVTDFREATCRQFEENNCNRGG-YCNFMHV 231
E P+ ++ + C F + C +G CN++H+
Sbjct: 274 ELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 306
>gi|242065404|ref|XP_002453991.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
gi|241933822|gb|EES06967.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
Length = 263
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 14/92 (15%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGR----GLAMAEHLASI------FGTEKDRVNCPFYFKIG 83
D+ + P P Q +V FA + L+ E L + FGTE+D+ +CPF+ K G
Sbjct: 167 DRPTSNPLPPQ----SVAFAAQRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTG 222
Query: 84 ACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
ACR G RCSR+H P S TLL+ NMY P +
Sbjct: 223 ACRFGVRCSRVHFYPDKSSTLLMKNMYNGPGL 254
>gi|325187020|emb|CCA21564.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 304
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRK------IQEHF------------EDF 139
P +S + ++ M+ + T + PI P + +HF E
Sbjct: 115 PCLSYIMSINLMWNLWNQGTAKSSSDFMPILPSDGSSKFLLLKHFCLDEILVDGSATELL 174
Query: 140 YEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
YE + ELS+ + + + NLA H+ GNVY++F EE A A AL+ R+Y GR +
Sbjct: 175 YE-MSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYYKGRILDA 233
Query: 200 EFSPVTDFREATCRQFEENNCNRGG-YCNFMHV 231
E P+ ++ + C F + C +G CN++H+
Sbjct: 234 ELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 266
>gi|359392834|gb|AEV45824.1| rough endosperm 3-umu1 gamma isoform [Zea mays]
Length = 311
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASI------FGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q A L+ E L + FGTE+D+ +CPF+ K GACR
Sbjct: 213 DRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRF 272
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDM 115
G RCSR+H P S TLL+ NMY P +
Sbjct: 273 GLRCSRVHFYPDKSITLLMKNMYNGPGL 300
>gi|359392838|gb|AEV45826.1| rough endosperm 3 beta isoform 1 [Zea mays]
gi|359392840|gb|AEV45827.1| rough endosperm 3 beta isoform 2 [Zea mays]
gi|359392842|gb|AEV45828.1| rough endosperm 3 beta isoform 3 [Zea mays]
gi|359392844|gb|AEV45829.1| rough endosperm 3 beta isoform 4 [Zea mays]
Length = 302
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASI------FGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q A L+ E L + FGTE+D+ +CPF+ K GACR
Sbjct: 178 DRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRF 237
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDM 115
G RCSR+H P S TLL+ NMY P +
Sbjct: 238 GLRCSRVHFYPDKSITLLMKNMYNGPGL 265
>gi|359392864|gb|AEV45839.1| rough endosperm 3 delta isoform [Zea mays]
Length = 289
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASI------FGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q A L+ E L + FGTE+D+ +CPF+ K GACR
Sbjct: 178 DRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRF 237
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDM 115
G RCSR+H P S TLL+ NMY P +
Sbjct: 238 GLRCSRVHFYPDKSITLLMKNMYNGPGL 265
>gi|358334074|dbj|GAA52523.1| kynurenine---oxoglutarate transaminase [Clonorchis sinensis]
Length = 1330
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 28/186 (15%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPT-----------------ISPTLLLSNMYQRPDMITP 118
C F+ K G CR+G CSR H+ P L + +M+ P + P
Sbjct: 455 CSFFRKTGTCRYGFSCSRRHDYPQRIESAVEEDAAAEDGDHSCIVLCIPHMFTHPHLPPP 514
Query: 119 GV------DAQGQPIDPRKIQ-EHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMIGNV 170
D+ D + + +FY D+ +EL +++G + L C N +H+ G V
Sbjct: 515 DATSGELEDSGTLSADEESVLCADYVEFYHDVRDELEARWGRVAALRTCRNRTEHLRGTV 574
Query: 171 YVQFREEEQAAA-ALHALQGRFYSGRPIIVEFSPV-TDFREATCRQFEENNCNRG-GYCN 227
YV+F A A A GR+++GR + + +REA C C +G CN
Sbjct: 575 YVEFALGSGATWDAAEACAGRWFAGRQLTCMVVRLGGGWREAICGLHHRRRCPKGDSKCN 634
Query: 228 FMHVKL 233
F+HV L
Sbjct: 635 FLHVFL 640
>gi|359392846|gb|AEV45830.1| rough endosperm 3 gamma isoform 1 [Zea mays]
gi|359392848|gb|AEV45831.1| rough endosperm 3 gamma isoform 2 [Zea mays]
gi|359392850|gb|AEV45832.1| rough endosperm 3 gamma isoform 3 [Zea mays]
gi|359392852|gb|AEV45833.1| rough endosperm 3 gamma isoform 4 [Zea mays]
gi|359392854|gb|AEV45834.1| rough endosperm 3 gamma isoform 5 [Zea mays]
gi|359392856|gb|AEV45835.1| rough endosperm 3 gamma isoform 6 [Zea mays]
gi|359392858|gb|AEV45836.1| rough endosperm 3 gamma isoform 7 [Zea mays]
gi|359392860|gb|AEV45837.1| rough endosperm 3 gamma isoform 8 [Zea mays]
gi|359392862|gb|AEV45838.1| rough endosperm 3 gamma isoform 9 [Zea mays]
Length = 276
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 34 DKLSEIPFPSQDKDSAVKFAGRGLAMAEHLASI------FGTEKDRVNCPFYFKIGACRH 87
D+ + P P Q A L+ E L + FGTE+D+ +CPF+ K GACR
Sbjct: 178 DRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRF 237
Query: 88 GDRCSRLHNRPTISPTLLLSNMYQRPDM 115
G RCSR+H P S TLL+ NMY P +
Sbjct: 238 GLRCSRVHFYPDKSITLLMKNMYNGPGL 265
>gi|140053487|gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago truncatula]
Length = 251
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
FGTE D+ +CPF+ K ACR GDRCSR+H P S TLL+ NMY P +
Sbjct: 184 FGTELDKAHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYNGPGL 232
>gi|156379395|ref|XP_001631443.1| predicted protein [Nematostella vectensis]
gi|156218483|gb|EDO39380.1| predicted protein [Nematostella vectensis]
Length = 357
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
FGTE+D VNC FY K G+CR G+RCSR H RP S TLL+ MYQ
Sbjct: 189 FGTEQDTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQ 233
>gi|302785351|ref|XP_002974447.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
gi|300158045|gb|EFJ24669.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
Length = 56
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%)
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
L GRFYSGR I E SPVTDFREA+CRQ E+ C+RG CNF+ + R L L
Sbjct: 1 LNGRFYSGRSIAAELSPVTDFREASCRQEEQGGCSRGRCCNFLDLYHPSRALMRAL 56
>gi|357445229|ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
gi|355481940|gb|AES63143.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
Length = 300
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
FGTE D+ +CPF+ K ACR GDRCSR+H P S TLL+ NMY P +
Sbjct: 184 FGTELDKAHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYNGPGL 232
>gi|224129492|ref|XP_002328730.1| predicted protein [Populus trichocarpa]
gi|222839028|gb|EEE77379.1| predicted protein [Populus trichocarpa]
Length = 71
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
FGTE+D+ +CPF+ K GACR G RCSR+H P + TLL+ NMY P +
Sbjct: 12 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPDKACTLLIKNMYNGPGL 60
>gi|308161619|gb|EFO64057.1| Splicing factor U2AF subunit, putative [Giardia lamblia P15]
Length = 191
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C F+ G CRHG C H T L+L N I P + Q D ++
Sbjct: 13 CRFHECTGYCRHGTECRNRHALFTGGRMLMLRN-------IIPRI----QHKDKAELYRF 61
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
++ +EDIF L++ G ++ V +N +H+ G VY Q+ + A L +Y+G
Sbjct: 62 YDHCFEDIFLRLAQLGPMQDFLVAEN-TNHLAGTVYAQYTSQVAAQDVASKLSNTYYAGF 120
Query: 196 PIIVEFSPVTDFREATCRQ-----FEENNCNRGGYCNFMH 230
P+ E V + CR N C G C+F+H
Sbjct: 121 PVKAEVIGVESIHKTLCRDEYASGKSGNKCAHGLSCSFVH 160
>gi|119629908|gb|EAX09503.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 132 IQEHFEDFYEDIFEELS-KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+QEH+++F+E++F E+ K+GE+E +NVCDNL DH++GNVYV+ + QG+
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKVGARARRRRGRLVCQGQ 60
>gi|302785353|ref|XP_002974448.1| hypothetical protein SELMODRAFT_101529 [Selaginella moellendorffii]
gi|300158046|gb|EFJ24670.1| hypothetical protein SELMODRAFT_101529 [Selaginella moellendorffii]
Length = 69
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 33/41 (80%)
Query: 71 KDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ 111
+DRVNCPFY K+GACR DRCSR H +P S TLLL+NMYQ
Sbjct: 1 QDRVNCPFYLKMGACRRRDRCSRAHLKPKQSCTLLLNNMYQ 41
>gi|253746096|gb|EET01601.1| Splicing factor U2AF subunit, putative [Giardia intestinalis ATCC
50581]
Length = 191
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 17/160 (10%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C F+ G CRHG C H T L+L N I P + Q D ++ +
Sbjct: 13 CRFHECTGYCRHGTECRNRHTLFTGGRMLMLRN-------IIPRI----QYTDRAELYKF 61
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
++ +EDIF L + G ++ V +N +H+ G VY Q+ + A A L +Y+G
Sbjct: 62 YDHCFEDIFLRLVQLGPLQDFLVAEN-TNHLAGTVYAQYASQVAAQDAASKLSDTYYAGF 120
Query: 196 PIIVEFSPVTDFREATCRQFEENN-----CNRGGYCNFMH 230
P+ E V + + CR + C G C+F+H
Sbjct: 121 PVKAEVIGVENVHKMLCRDEYASGKPGSKCAHGLSCSFVH 160
>gi|159112951|ref|XP_001706703.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
gi|157434802|gb|EDO79029.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
Length = 193
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 76 CPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEH 135
C F+ G CRHG C H T L+L N I P + Q D ++ +
Sbjct: 15 CRFHECTGYCRHGTECRNRHALFTDGRMLMLRN-------IIPRI----QHKDKAELYKF 63
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
++ +EDIF L++ G ++ V +N +H+ G VY Q+ + A L +Y+G
Sbjct: 64 YDHCFEDIFLRLAQLGPMQDFLVAEN-TNHLAGTVYAQYASQVAAQDVASKLSNTYYAGF 122
Query: 196 PIIVEFSPVTDFREATCRQ-----FEENNCNRGGYCNFMH 230
P+ E V + CR + C G C+F+H
Sbjct: 123 PVKAEVIGVESIHKTLCRDEYASGKSGSKCAHGLSCSFVH 162
>gi|119589408|gb|EAW69002.1| hCG1642635 [Homo sapiens]
Length = 145
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 70 EKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMY--------QRPDMITPGVD 121
EKD VNCPFY K GACR GDRCS H+ PT SPTLL+ +M+ +R D +
Sbjct: 22 EKDGVNCPFYSKTGACRFGDRCS--HDFPTSSPTLLIKSMFTVFGKEQCRRDDYDSEASL 79
Query: 122 AQGQPIDPRKIQEHFEDFYEDIFEELSKFG----EIECLNVCDNLADHMIG 168
+ + + F DF ED+ E G + V NL H+ G
Sbjct: 80 EYSE----EETYQQFLDFCEDVLPEFKNVGRDWARVIQFKVSCNLEPHLRG 126
>gi|156344584|ref|XP_001621239.1| hypothetical protein NEMVEDRAFT_v1g222211 [Nematostella vectensis]
gi|156206977|gb|EDO29139.1| predicted protein [Nematostella vectensis]
Length = 220
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%)
Query: 72 DRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD 121
D VNC FY K G+CR G+RCSR H RP S TLL+ MYQ + +D
Sbjct: 162 DTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQDIQLYQGMLD 211
>gi|242061866|ref|XP_002452222.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
gi|241932053|gb|EES05198.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
Length = 88
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 67 FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 115
FGT++D+V+CPF+ GAC G RC R+H P S TLL+ NMY P +
Sbjct: 29 FGTKQDKVHCPFHLMTGACCFGVRCGRVHFYPDKSSTLLMKNMYSDPGL 77
>gi|161612122|gb|AAI56009.1| LOC100135135 protein [Xenopus (Silurana) tropicalis]
Length = 260
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 183 ALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
A GR+Y+ R + EFSPVT ++ A C FE C RG +CNF+HV ++ N+
Sbjct: 3 AFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV---FKNPNNEF 59
Query: 243 FGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYR--DRDYERSRRTHSRSSTSSR 297
+ R S S I + R R GD + R Y DY +R S+ SSR
Sbjct: 60 WEANRDIHLSPDRSGISERKDRSSRHGDHGHHRRYHSPSPDYSYNRNGDSKRKKSSR 116
>gi|241561670|ref|XP_002401206.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
gi|215499816|gb|EEC09310.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
Length = 409
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 177 EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHV 231
EE+A AL GR+Y+GR I EFSPV ++ A C F N C +G CNF+HV
Sbjct: 156 EEEATRALVMFNGRWYAGRQISCEFSPVQRWKSAICGLFFRNRCPKGRGCNFLHV 210
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 96 NRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIEC 155
+ T S ++L NM+ D +D ++ F D +D+ +E KFG +E
Sbjct: 541 DNATGSCNVVLHNMFAPKD------------VDLKEDPHFFLDLGDDVRDECKKFGSVEK 588
Query: 156 LNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ + + D GNV+++F +QA AA AL GR+++G+PI EF
Sbjct: 589 VWIDERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGKPISAEF 631
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
T S ++L NM+ D ++ ++ F D +D+ +E KFG +E + +
Sbjct: 535 TGSCNVVLHNMFAAKD------------VNLKEDPHFFLDLGDDVRDECKKFGSVEKVWI 582
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ D GNV+++F +QA AA AL GR+++G+PI EF
Sbjct: 583 DERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGKPISAEF 622
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
T S ++L NM+ D ++ ++ F D +D+ +E KFG +E + +
Sbjct: 535 TGSCNVVLHNMFAAKD------------VNLKEDPHFFLDLGDDVRDECKKFGSVEKVWI 582
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ D GNV+++F +QA AA AL GR+++G+PI EF
Sbjct: 583 DERNVD---GNVWIRFAHPDQARAAFGALNGRYFAGKPISAEF 622
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 97 RPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECL 156
+P S L+LSNMY D +E F++ ED+ EE K+G + +
Sbjct: 544 QPLNSSNLVLSNMYTSADY--------------EDNREFFDEIEEDVKEECGKYGTVIQV 589
Query: 157 NVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
V D G VYV+F+ + A AA +LQGR+++G I V +
Sbjct: 590 FVNKRNPD---GKVYVKFKNNDDAQAANKSLQGRYFAGNTIQVSY 631
>gi|340371085|ref|XP_003384076.1| PREDICTED: hypothetical protein LOC100639094 [Amphimedon
queenslandica]
Length = 692
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 28/130 (21%)
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
+DP I D +D+ EE SKFGE++ + V D H+ G V F+E E A AA+ A
Sbjct: 268 VDPTLIT----DIRDDLREECSKFGEVKKVLVFDR---HVDGVASVAFKEFEPAEAAITA 320
Query: 187 LQGRFYSGRPI-IVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGR 245
+ GR+Y+GR + + + VT++ Q EE + R+LR K +
Sbjct: 321 MNGRYYAGRQLEVFLWDGVTNY------QIEETDKE--------------RELRLKQWEE 360
Query: 246 YRRRSRSRSF 255
Y + S+SF
Sbjct: 361 YLQSGASKSF 370
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 97 RPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECL 156
+P S L+LSNMY D E F++ ED+ EE K+G + +
Sbjct: 543 QPLNSSNLVLSNMYTSADYADN--------------HEFFDEIEEDVKEECGKYGTVVQV 588
Query: 157 NVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
V D G VYV+F+ + A +A +LQGR+++G I V +
Sbjct: 589 FVNRRNPD---GKVYVKFKNNDDAQSANKSLQGRYFAGNTIQVSY 630
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVC---DNLADHMIGNVYVQFREEEQAAAA 183
ID + E + D ED+ EE +FG + + + D +G +YV+F +EE A +A
Sbjct: 508 IDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSA 567
Query: 184 LHALQGRFYSGRPIIVEFSPVTDF 207
L AL GR + G + V + PV F
Sbjct: 568 LKALNGRKFGGNIVKVTYFPVDKF 591
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 127 IDPRKIQEH--FEDFYEDIFEELSKFGEIECLN----VCDNLADHMIGNVYVQFREEEQA 180
+ P ++ ++ +E+ ED+ EE KFG + L + N +G +YV+F + E A
Sbjct: 493 VTPEELMDNDDYEEIREDVLEECKKFGNVLSLKIPRPIGGNRQSAGVGKIYVKFEQVESA 552
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
AL AL GR +S R ++ + P ++ E C
Sbjct: 553 TKALRALAGRKFSDRTVVTTYFPEENY-EVNC 583
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHM-----IGNVYVQFREEEQAAAALHALQ 188
+ + D YED+ EE S +G +E L + A + +G VYV++++ E A AAL+ L
Sbjct: 270 QEYGDLYEDVKEECSNYGAVEDLRIPRPDAVRLDEASGVGRVYVKYKDSESATAALNNLA 329
Query: 189 GRFYSGRPIIVEF 201
GR ++GR II
Sbjct: 330 GRSFAGRSIIATL 342
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 111 QRPDMITPGVDAQGQPIDPRKI--------------QEHFEDFYEDIFEELSKFGEIECL 156
Q+P + PG+ P P +I E FED DI +E +K+G++ +
Sbjct: 318 QQPIVQVPGISTLLDPGSPTEILCLLNMVLPEELLDNEEFEDIRSDIKQECAKYGDVRSI 377
Query: 157 NV---CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ G V+VQF E + AL AL GR +SGR ++ F
Sbjct: 378 KIPRPVGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSF 425
>gi|226532572|ref|NP_001144599.1| uncharacterized protein LOC100277614 [Zea mays]
gi|195644392|gb|ACG41664.1| hypothetical protein [Zea mays]
Length = 165
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 282 YER----SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
YER RR H S R R+PVRE SEERRAKIEQWNRERE Q
Sbjct: 121 YERYDDGGRRRHG--SPPRRGRSPVRESSEERRAKIEQWNRERESKQ 165
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQ 188
QE +E+ ED+ +E +KFG I + + + A +G +YV+F E E A AL +L
Sbjct: 486 QEEYEEILEDVTDECNKFGPIIDIKIPRPSGNQRAAAGVGKIYVRFEEHESAEKALKSLA 545
Query: 189 GRFYSGRPIIVEF 201
GR ++ R +IV +
Sbjct: 546 GRKFADRTVIVSY 558
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 96 NRPTISPT--LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEI 153
N T+ T ++LSNM+ D P + DP E F D ED+ E K+G +
Sbjct: 379 NSATVGVTENIVLSNMFSATD---PQIME-----DP----EFFTDLVEDVKSECKKYGNV 426
Query: 154 ECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
+ + ++ D M V+V+F EQA AA +L RF+ G I F+
Sbjct: 427 LQVYINKSVPDGM---VWVKFATVEQAVAAFQSLNDRFFGGNSISAAFA 472
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 111 QRPDMITPGVDAQGQPIDPRKI--------------QEHFEDFYEDIFEELSKFGEIECL 156
Q+P + PG+ P P +I E FED DI +E +K+GE+ +
Sbjct: 321 QQPLVQVPGISTLLDPGSPTEIICLLNMVLPEELLDNEEFEDIRTDIEQECAKYGEVRSI 380
Query: 157 NVCDNLADHM---IGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ + G V+VQF E + AL AL GR +SGR ++ F
Sbjct: 381 KIPRPIGQAPKRGCGKVFVQFESVEDSQRALKALSGRKFSGRIVMTSF 428
>gi|328766440|gb|EGF76494.1| hypothetical protein BATDEDRAFT_21058 [Batrachochytrium
dendrobatidis JAM81]
Length = 551
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 100 ISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV- 158
++ LLL NM D+++ E ++D DI EE KFG I + +
Sbjct: 451 VTRVLLLLNMVVSEDLVS---------------DEDYQDILLDIQEECEKFGTILDIAIP 495
Query: 159 --CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
++ +G ++V+F +Q+A+A HAL GR ++ R +I F
Sbjct: 496 RPVSGQSNAGVGKIFVKFDNVKQSASAQHALAGRKFADRVVIASF 540
>gi|413948478|gb|AFW81127.1| hypothetical protein ZEAMMB73_610548, partial [Zea mays]
Length = 108
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 282 YER----SRRTHSRSSTSSRSRTPVREGSEERRAKIEQWNREREENQ 324
YER RR H S R R+PVRE SEERRAKIEQWNRERE Q
Sbjct: 64 YERYDDGGRRRHG--SPPRRGRSPVRESSEERRAKIEQWNRERESKQ 108
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 27/131 (20%)
Query: 74 VNCPFYFKIGACRHGDRCSRLHNRPT-ISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKI 132
+NC A GDR + + P+ S TL L N+
Sbjct: 232 INCDMSTSKPASNGGDRAKKFGDTPSEPSETLFLGNL----------------------- 268
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNL-ADHMIGNVYVQFREEEQAAAALHALQGRF 191
F+ ++I+E SK+GEI + + + + G YVQ+ + E A AL ALQG +
Sbjct: 269 --SFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESAKKALDALQGEY 326
Query: 192 YSGRPIIVEFS 202
+ RP+ ++FS
Sbjct: 327 INNRPVRLDFS 337
>gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]
Length = 640
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVC---DNLADHMIGNVYVQFREEEQAAAA 183
ID + + + D ED+ EE +FG + L + D +G +YV+F EE+ A A
Sbjct: 551 IDELRDDDEYADLAEDVEEECKRFGNVTGLEIPRPKDGEEVPGLGCIYVRFEEEKNAVDA 610
Query: 184 LHALQGRFYSGRPIIVEFSPVTDF 207
L AL GR + G + V + P+ F
Sbjct: 611 LKALNGRKFGGNIVKVTYFPLDKF 634
>gi|425773483|gb|EKV11835.1| Splicing factor u2af large subunit [Penicillium digitatum Pd1]
Length = 585
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
T S L + + Q +M+T +D E +E+ ED+ +E SKFG I + +
Sbjct: 483 TTSQDLETTQVLQLLNMVT---------LDELLNDEDYEEIMEDVSDECSKFGTILGIKI 533
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
H G +++++ E A AL AL GR +S R ++ + V +F
Sbjct: 534 PRR--GHGAGKIFIKYDAAESATNALKALAGRKFSDRTVVASYFGVENF 580
>gi|440801311|gb|ELR22331.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 375
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
E + D D+ EE+ KFGE+E L V + + G V ++F E E A L + GRF++
Sbjct: 270 EFYPDLKNDVREEVEKFGEVEVLTVFERNPE---GVVAIKFVEPEAAVKCLEVMNGRFFA 326
Query: 194 GRPIIVE-FSPVTDFR 208
R ++ E + VT+++
Sbjct: 327 KRQLVAEWYDGVTNYK 342
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 18/106 (16%)
Query: 101 SPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCD 160
+ ++LSNM+ D PG D +P F + ED+ EE K+G++ + +
Sbjct: 416 TSNIILSNMFTAND---PGAD---EP-------NFFVEIEEDVKEECEKYGKVVAVYLNK 462
Query: 161 NLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTD 206
D G V+V+F+ A+ A L GR+++G I VE+ VTD
Sbjct: 463 KTID---GKVWVKFQNSTDASTAYKGLNGRYFAGNTIKVEY--VTD 503
>gi|425775779|gb|EKV14031.1| Splicing factor u2af large subunit [Penicillium digitatum PHI26]
Length = 585
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
T S L + + Q +M+T +D E +E+ ED+ +E SKFG I + +
Sbjct: 483 TTSQDLETTQVLQLLNMVT---------LDELLNDEDYEEIMEDVSDECSKFGTILGIKI 533
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
H G +++++ E A AL AL GR +S R ++ + V +F
Sbjct: 534 PRR--GHGAGKIFIKYDAAESATNALKALAGRKFSDRTVVASYFGVENF 580
>gi|301088364|ref|XP_002996880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110854|gb|EEY68906.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVC---DNLADHMIGNVYVQFREEEQAAAA 183
ID + E + D ED+ EE +FG + + + D +G +YV+F +EE A +A
Sbjct: 7 IDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSA 66
Query: 184 LHALQGRFYSGRPIIVEFSPVTDFRE 209
L AL GR + G + V + PV F +
Sbjct: 67 LKALNGRKFGGNIVKVTYFPVDKFEK 92
>gi|224080644|ref|XP_002306193.1| predicted protein [Populus trichocarpa]
gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 28/132 (21%)
Query: 94 LHNRPTISPTL--LLSNM-----------YQRPDMITPGVDAQGQPIDPRKIQEHFE--- 137
L P +SP + LLS Q P P +D G P D ++ F+
Sbjct: 207 LGATPVVSPAVAPLLSGSVPAIPGLPVPGLQLPATAIPTMDTIGVPSDCLFLKNMFDPKT 266
Query: 138 --------DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
D ED+ EE S+FG ++ + V N A G VY++F + A A HAL G
Sbjct: 267 ETEPDFDLDIKEDVQEECSRFGNVKHIYVDKNSA----GFVYMRFENMQAAINAQHALHG 322
Query: 190 RFYSGRPIIVEF 201
R+++G+ I F
Sbjct: 323 RWFAGKLITATF 334
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 25/109 (22%)
Query: 97 RPTI-SPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQE---HFEDFYEDIFEELSKFGE 152
RP + S +LL NM+ DP + E H D ED+ EE SK+G+
Sbjct: 495 RPVVASAFMLLKNMF-----------------DPAQETEPNFHL-DIQEDVTEECSKYGK 536
Query: 153 IECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ C + D G VY++F E AA A+ AL GR+++G+ I EF
Sbjct: 537 VLQ---CHVVRDSPSGLVYLRFESSEGAAKAIQALNGRWFAGKVISAEF 582
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 24/99 (24%)
Query: 127 IDPRKIQ--EHFEDFYEDIFEELSKFGEIECLNV--------------------CDNLAD 164
+ P ++Q + + D YEDI EE ++G +E L + LAD
Sbjct: 350 VVPEELQDDQEYADIYEDITEECGRYGAVEDLRIPRPVKRDKAKWGENGMDSARAAQLAD 409
Query: 165 HM--IGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VYV++ + AA AL AL GR ++GR II
Sbjct: 410 EAAGVGRVYVKYAQPNSAANALKALAGRSFAGRSIIATL 448
>gi|294659352|ref|XP_461720.2| DEHA2G04004p [Debaryomyces hansenii CBS767]
gi|199433897|emb|CAG90172.2| DEHA2G04004p [Debaryomyces hansenii CBS767]
Length = 636
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHM----------IGNVYVQFREEEQAAAALH 185
F+ +DI +E+SKFG ++ + + D+ +G +Y++F +EE A A+
Sbjct: 550 FKFIQKDIQQEVSKFGNLKTIKIPRPANDYTPGISQFTQPGLGKIYIEFDDEETALNAIM 609
Query: 186 ALQGRFYSGRPIIVEFSPVTDFREA 210
L GR Y+ R ++ F DF+
Sbjct: 610 GLAGRMYNDRTVLCSFYDYDDFKNG 634
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 113 PDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLNVCDNLADHMI-GNV 170
P++ P + + + + EDI + S FG+I+ + + ++ G
Sbjct: 103 PEVPVPKISTSAKNCTTLYVGNLSYEITEDIIRRVFSPFGDIKAVRLAQHIQTKKFRGFG 162
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTD-------------FREATCRQFEE 217
YVQF + E AL A G+ GRP+ V+ S D ++ C +F+
Sbjct: 163 YVQFYDTESCTKAL-ATNGKIVIGRPMHVDLSGEDDASIKQKREEMERKLKKGICNRFQS 221
Query: 218 NNCNRGGYCNFMHVK 232
N+C G C F HV+
Sbjct: 222 NSCLHGDACKFAHVQ 236
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLN 157
P + LLL NM+ + P D ++ D+ EE SK+G + +
Sbjct: 401 PIPTQCLLLKNMFDPKEETEPDWD---------------QEIATDVTEECSKYGPVSHTH 445
Query: 158 VCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
V N G VY++F E +AAA AL GR+++GR ++ EF
Sbjct: 446 VDKNSK----GFVYLKFVTVEGSAAAQKALHGRWFAGRQVVAEF 485
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLN 157
+ S +LLL NM+ + P D D ED+ EE +K+G + ++
Sbjct: 564 STSTSLLLKNMFNPAEETEPDWDT---------------DLAEDVKEECQAKYGRVTSIH 608
Query: 158 VCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSP 203
V A G +YV F + + + AL L GRF+ G+PI ++ P
Sbjct: 609 VEKESA----GEIYVTFADLDASRKALDGLNGRFFGGKPISAQYIP 650
>gi|440468063|gb|ELQ37246.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae Y34]
gi|440489023|gb|ELQ68704.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae P131]
Length = 640
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLN 157
P +SP L L NM +++ + +E+ ED+ EE +K+G + L
Sbjct: 517 PDLSPVLQLLNMVTADELMD---------------NDDYEEICEDVQEECAKYGTVIELK 561
Query: 158 V----CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCR 213
V +G +YV+F E + AL AL GR ++ R ++ + P +F C
Sbjct: 562 VPRPSSGAKQAAGVGKIYVKFDSIESSTKALKALGGRKFADRTVVTTYFPEENFAVNACG 621
Query: 214 QFEEN 218
+++
Sbjct: 622 GMKDS 626
>gi|384496094|gb|EIE86585.1| hypothetical protein RO3G_11296 [Rhizopus delemar RA 99-880]
Length = 502
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 127 IDPRKIQ--EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMI---GNVYVQFREEEQAA 181
+ P +++ E ++D +EDI EE +KFG I + + D + G ++V++ ++
Sbjct: 412 VSPEELEDDEEYQDIWEDIAEECAKFGNIVDMKIPKPQKDQQVPGCGLIFVRYETTDETL 471
Query: 182 AALHALQGRFYSGRPIIVEF 201
AAL AL GR ++ R ++ F
Sbjct: 472 AALRALAGRKFADRTVVATF 491
>gi|255931767|ref|XP_002557440.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582059|emb|CAP80223.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 554
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
E +E+ ED+ EE SKFG++ + + H G +++++ E A AL AL GR +S
Sbjct: 478 EDYEEILEDVGEECSKFGKMIGIKIPRR--GHGAGKIFIKYDTAESATNALKALAGRKFS 535
Query: 194 GRPIIVEFSPVTDF 207
R ++ + V +F
Sbjct: 536 DRTVVASYFSVENF 549
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 103 TLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV---- 158
L+L+NM +TP D K + +++ ED+ EE++KFGE+ L +
Sbjct: 324 VLVLANM------VTP---------DELKDDQEYQEIVEDVREEVAKFGEVLSLVIPRPE 368
Query: 159 -CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G ++V++ E Q AA +LQGR ++GR + F
Sbjct: 369 EPSAPPSPAVGKIFVEYAESSQTKAAAQSLQGRRFAGRIVQASF 412
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
I+P L+L NM+ +P + G DP + F D ED+ EE SK+G I + +
Sbjct: 872 NITPNLVLCNMF------SPNDENIGS--DP----DFFSDIIEDVKEECSKYGSITKIWM 919
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
++ G +Y+++ ++++A A L GR++ G I F
Sbjct: 920 D---TKNIDGKIYIKYTKQDEAFKAFQFLNGRYFGGSLINAYF 959
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Query: 98 PTISPT------LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFG 151
P+I P L+L NM+ D P D D ED+ E SKFG
Sbjct: 493 PSIDPIGVPSECLMLKNMFDPKDETEPDFDL---------------DIKEDVEAECSKFG 537
Query: 152 EIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
++ + V A G VY++F + + A +A AL GR+++G+ I F
Sbjct: 538 ALKHIYVDKKSA----GFVYLRFEDTQSAISAQQALHGRWFAGKMITASF 583
>gi|325179530|emb|CCA13927.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 833
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVC---DNLADHMIGNVYVQFREEEQAAAAL 184
D K E F D ED+ EE +FG I L++ D GN++V++ + ++A AA
Sbjct: 745 DELKNDEEFADLKEDVEEECKRFGTIIALDIPRSQDGEEIAGTGNIFVRYSDTKEATAAQ 804
Query: 185 HALQGRFYSGRPIIVEFSPVTDF 207
AL GR + G + V + ++ F
Sbjct: 805 KALCGRKFGGNVVKVTYFSLSKF 827
>gi|401410470|ref|XP_003884683.1| hypothetical protein NCLIV_050810 [Neospora caninum Liverpool]
gi|325119101|emb|CBZ54653.1| hypothetical protein NCLIV_050810 [Neospora caninum Liverpool]
Length = 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 109 MYQRPDM---ITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADH 165
MY P + I G + + +D + +HFE F+ ++FEEL+K+GE+E + VCDN+ +
Sbjct: 1 MYPNPPVAVAIAEGQNVSDELLD--QAADHFEAFFSEVFEELAKYGEVEDMVVCDNIEET 58
Query: 166 MIGNV 170
+ +V
Sbjct: 59 ISEDV 63
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 28/132 (21%)
Query: 94 LHNRPTISPTL-------------LLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE--- 137
L P +SP + L Q P + P +D G P + ++ F+
Sbjct: 468 LGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKL 527
Query: 138 --------DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQG 189
D ED+ +E SKFG ++ + V N A G V+++F + A +A AL G
Sbjct: 528 ETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSA----GFVFLRFENTQAAISAQRALHG 583
Query: 190 RFYSGRPIIVEF 201
R+++G+ I F
Sbjct: 584 RWFAGKMITATF 595
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLN 157
P + LL+NM+ D + +D E + +D+ EE +K G + L+
Sbjct: 386 PIATQCFLLANMF----------DPNKEDVDSNTTWE--TEIRDDVIEECNKHGGV--LH 431
Query: 158 VCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
V + A GNVYV+ E A A++ AL GR++ GR I + PVT++
Sbjct: 432 VYVDKASPQ-GNVYVKCTTIETALASVAALHGRWFGGRVITAAYVPVTNY 480
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 113 PDMITPGVDAQGQPIDPRKIQEHF-----------EDFYEDIFEELSKFGEIECLNVCDN 161
P +I G D G P + ++ F ED ED+ EE SKFG++ + V N
Sbjct: 499 PGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN 558
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VY++F + A A AL GR+++G+ I +
Sbjct: 559 ----SVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATY 594
>gi|358378060|gb|EHK15743.1| hypothetical protein TRIVIDRAFT_79964 [Trichoderma virens Gv29-8]
Length = 503
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 127 IDPRKIQEH--FEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQA 180
+ P ++ ++ +E+ ED+ +E SKFG++ L V + +G +YV+F EE A
Sbjct: 412 VTPEELMDNDDYEEICEDVQDECSKFGKVVELKVPRPSGGSRQSTGVGKIYVKFDSEESA 471
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDF 207
AL AL GR ++ R ++ + P +F
Sbjct: 472 TKALTALAGRKFADRTVVSTYFPEENF 498
>gi|212539738|ref|XP_002150024.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067323|gb|EEA21415.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 556
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ +E SK+G++ L + + +G ++V+F E A AL AL G
Sbjct: 469 EDYEEILEDVQDECSKYGQVLDLKIPRPAGGSRQSAGVGKIFVKFDTVESATNALKALAG 528
Query: 190 RFYSGRPIIVEFSPVTDFREATC 212
R +S R ++ + P F T
Sbjct: 529 RKFSDRTVVTTYFPEVSFLSMTL 551
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 113 PDMITPGVDAQGQPIDPRKIQEHF-----------EDFYEDIFEELSKFGEIECLNVCDN 161
P +I G D G P + ++ F ED ED+ EE SKFG++ + V N
Sbjct: 488 PGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN 547
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VY++F + A A AL GR+++G+ I +
Sbjct: 548 ----SVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATY 583
>gi|320590609|gb|EFX03052.1| splicing factor u2af large subunit [Grosmannia clavigera kw1407]
Length = 420
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLA----DHMIGNVYVQFREEEQAAAALHALQG 189
+ +ED ED+ EE +KFG + L V + +G ++V+F + A AL AL G
Sbjct: 193 DDYEDICEDVTEECAKFGPVMGLKVPRPASGGRHSPGVGKIFVKFDSRDSATKALKALAG 252
Query: 190 RFYSGRPIIVEFSPVTDFREATC 212
R +S R ++ + P +F C
Sbjct: 253 RKFSDRTVVATYFPEENFEVDAC 275
>gi|169642352|gb|AAI60527.1| htatsf1 protein [Xenopus (Silurana) tropicalis]
Length = 389
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ L + D H G V F+E E+ + AL GR++ GR +IVE
Sbjct: 231 EDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIVE 287
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 288 SWDGVTDYQ 296
>gi|301606045|ref|XP_002932639.1| PREDICTED: HIV Tat-specific factor 1 homolog [Xenopus (Silurana)
tropicalis]
Length = 452
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ L + D H G V F+E E+ + AL GR++ GR +IVE
Sbjct: 294 EDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIVE 350
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 351 SWDGVTDYQ 359
>gi|59862144|gb|AAH90381.1| htatsf1-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 524
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ L + D H G V F+E E+ + AL GR++ GR +IVE
Sbjct: 366 EDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEAEEGDMCIQALNGRWFGGRQLIVE 422
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 423 SWDGVTDYQ 431
>gi|448118323|ref|XP_004203467.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|448120732|ref|XP_004204050.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384335|emb|CCE79039.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384918|emb|CCE78453.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
Length = 581
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 127 IDPRKIQE--HFEDFYEDIFEELSKFGEIECLNV-----------CDNLADHMIGNVYVQ 173
+ PR+I++ FE DI E+SK+G ++ + V +L + +G ++++
Sbjct: 483 VSPREIRDKAEFEFIINDIVNEVSKYGRVKSVKVPQPSSEYYQISLSDLPEPHVGRIFIE 542
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFR 208
+E+ A A+ L GR Y+ R ++ F D++
Sbjct: 543 LEDEDSALNAIMKLAGRLYNDRVVVCAFFDYNDYK 577
>gi|388517761|gb|AFK46942.1| unknown [Lotus japonicus]
Length = 175
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 110 YQRPDMITPGVDAQGQPIDPRKIQEHFE-----------DFYEDIFEELSKFGEIECLNV 158
Q P P VD G P + ++ F+ D ED+ E SKFG+++ + V
Sbjct: 63 LQIPTATIPSVDTIGVPSECLMLKNMFDPKAETEPDFDLDIKEDVEAECSKFGKLKHIYV 122
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
A G VY++F + A A AL GR+++G+ I V F
Sbjct: 123 DKKSA----GFVYLRFEATQAAIGAQRALHGRWFAGKMITVSF 161
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 113 PDMITPGVDAQGQP---------IDPR-KIQEHF-EDFYEDIFEELSKFGEIECLNVCDN 161
P +I G D G P DP + ++ F ED ED+ EE SKFG++ + V N
Sbjct: 450 PGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN 509
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VY++F + A A AL GR+++G+ I +
Sbjct: 510 ----SVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATY 545
>gi|351711124|gb|EHB14043.1| Splicing factor U2AF 26 kDa subunit [Heterocephalus glaber]
Length = 91
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 80 FKIGACRHGDRCSRLHNRPTISPTLL--LSNMYQRPDMIT 117
FKIGAC HGDRCSRLHN+PT S +S++ R MIT
Sbjct: 23 FKIGACWHGDRCSRLHNKPTCSQVRPGHVSDIEAREHMIT 62
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 113 PDMITPGVDAQGQP---------IDPR-KIQEHF-EDFYEDIFEELSKFGEIECLNVCDN 161
P +I G D G P DP + ++ F ED ED+ EE SKFG++ + V N
Sbjct: 449 PGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN 508
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VY++F + A A AL GR+++G+ I +
Sbjct: 509 ----SVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATY 544
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEEL-SKFGEIECLN 157
+ S +LLL NM+ + G D +D ED+ +E +K+G + ++
Sbjct: 583 STSTSLLLKNMFNPAEETEQGWD---------------KDLAEDVKDECHAKYGAVTSIH 627
Query: 158 VCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSP 203
V + A G VYV F + + AL L GRF+ G+PI ++ P
Sbjct: 628 VEKDSA----GEVYVTFANLDGSRKALEGLNGRFFGGKPISAQYIP 669
>gi|242069889|ref|XP_002450221.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
gi|241936064|gb|EES09209.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
Length = 469
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
P + R +E + D+ EE KFG ++ + VC+N H G V V+F++ + AA +
Sbjct: 366 PAELRADEELLSELETDVREECIKFGPVDNVKVCEN---HPQGVVLVKFKDRKDAAKCIE 422
Query: 186 ALQGRFYSGRPI 197
+ GR+++GR I
Sbjct: 423 KMNGRWFAGRQI 434
>gi|367020820|ref|XP_003659695.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
gi|347006962|gb|AEO54450.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
Length = 567
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 127 IDPRKIQEH--FEDFYEDIFEELSKFGEIECLNVCDNLA----DHMIGNVYVQFREEEQA 180
+ P ++ ++ +E+ ED+ EE KFG+I L + + +G +Y+++ E A
Sbjct: 476 VTPEELMDNDDYEEIREDVQEECQKFGKILSLKIPRPVGGSRQSAGVGKIYIKYETAESA 535
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDF 207
AL AL GR ++ R ++ + P +F
Sbjct: 536 TKALRALAGRKFADRTVVTTYFPEENF 562
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 101 SPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCD 160
+P + L NM +++ P E ++D +DI EE SK+GE+ + +
Sbjct: 294 TPVVQLLNMVTPEELMDP---------------EEYQDIVDDIREECSKYGEVVSVAIPR 338
Query: 161 NLAD---HMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFR 208
+ +G VYV+F + A AL AL GR ++ R ++ F + +R
Sbjct: 339 PVPGREVSGVGKVYVEFSNVDHAYQALQALSGRKFASRIVVTSFYGLDAYR 389
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
F E + E SKFGEI +N+ D D G YV F E +A AL + G+ G
Sbjct: 43 FSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAYVTFATENEAKKALTEMNGKVIDG 102
Query: 195 RPIIVE 200
RP+ V+
Sbjct: 103 RPVFVD 108
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 113 PDMITPGVDAQGQPIDPRKIQEHF-----------EDFYEDIFEELSKFGEIECLNVCDN 161
P +I G D G P + ++ F ED ED+ EE SKFG++ + V N
Sbjct: 309 PGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN 368
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VY++F + A A AL GR+++G+ I +
Sbjct: 369 ----SVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATY 404
>gi|358391563|gb|EHK40967.1| hypothetical protein TRIATDRAFT_135674 [Trichoderma atroviride IMI
206040]
Length = 558
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 107 SNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV----CDNL 162
S++ Q +M+TP + ID + +E+ ED+ +E +KFG++ L V +
Sbjct: 458 SSVIQLLNMVTPE-----ELID----NDDYEEICEDVQDECAKFGKVVELKVPRPSGGSR 508
Query: 163 ADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
+G +YV++ EE A AL AL GR ++ R ++ + P +F
Sbjct: 509 QSAGVGKIYVKYDSEESATKALTALAGRKFADRTVVATYFPEENF 553
>gi|384500209|gb|EIE90700.1| hypothetical protein RO3G_15411 [Rhizopus delemar RA 99-880]
Length = 490
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHMI---GNVYVQFREEEQAAAALHALQGR 190
E ++D +EDI EE +KFG + + + D + G ++V+F ++Q AL AL GR
Sbjct: 409 EEYQDIWEDIAEECAKFGNVLDMKIPKPQKDQEVPGCGLIFVRFETKDQTLDALRALAGR 468
Query: 191 FYSGRPIIVEF 201
++ R ++ F
Sbjct: 469 KFADRTVVATF 479
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 113 PDMITP----GVDAQGQPIDPRKIQEHFE-----------DFYEDIFEELSKFGEIECLN 157
P ++ P VDA GQP + ++ F+ D ED+ +E SKFG ++ +
Sbjct: 250 PGLVMPPVVGAVDAIGQPSEYLLLKNMFDPSTESDPEFDLDIKEDVQDECSKFGAVKHIF 309
Query: 158 VCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
V N A H VY+ F A AA AL GR+++G+ I +
Sbjct: 310 VDKNSAGH----VYLCFESTPAAMAAQRALHGRWFAGKMITATY 349
>gi|67604702|ref|XP_666635.1| splicing factor [Cryptosporidium hominis TU502]
gi|54657670|gb|EAL36408.1| splicing factor [Cryptosporidium hominis]
Length = 563
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 104 LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEI-ECLNVCDNL 162
LLLSNM+ + + + I++ E+ D+ EE K+G + EC D
Sbjct: 464 LLLSNMFTEQSI-------KESMEEDETIEQILEEIQADVEEECGKYGTLLECF--LD-- 512
Query: 163 ADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREAT 211
+ M GNV+V++ E+A+ A GRF++GR + V F +F +A
Sbjct: 513 KEKMDGNVWVKYSRPEEASKAKMVFHGRFFAGRKLNVSFIKDEEFPKAV 561
>gi|452823570|gb|EME30579.1| RNA-binding protein [Galdieria sulphuraria]
Length = 400
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
++ED +D+ EE SK GEIE L V + + G V V+FR A + + + GR+Y G
Sbjct: 293 YYEDIRKDMLEECSKLGEIEKLTVFERNPE---GVVAVRFRSPAAAESCIELMTGRWYGG 349
Query: 195 RPIIVEF-SPVTDFR 208
R + EF TD+R
Sbjct: 350 RQLEAEFYDGKTDYR 364
>gi|224081877|ref|XP_002306512.1| predicted protein [Populus trichocarpa]
gi|222855961|gb|EEE93508.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE-----------DFYEDIFEE 146
P I T + + P + +P + GQP + ++ F+ D ED+ EE
Sbjct: 243 PIIGQTAIGAAALPAPVLSSPAYEPIGQPSECLMLKNMFDPATETEPDFDLDIKEDVEEE 302
Query: 147 LSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTD 206
SK+G++E + V N G VY++F E AA A A+ R+++ R I+ F P +
Sbjct: 303 CSKYGQVEHIFVDKN----STGCVYLRFGSIEAAAGAQRAMHMRWFARRLILAVFMPTRE 358
Query: 207 F 207
+
Sbjct: 359 Y 359
>gi|209878175|ref|XP_002140529.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
gi|209556135|gb|EEA06180.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
Length = 555
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 20/107 (18%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEI-EC-- 155
T S L+L NM+ R +++ D++G ID ++E +D+ E K+GE+ EC
Sbjct: 456 TSSRCLVLGNMFTREEIL----DSKGD-IDIITLEE----IEKDVESECKKYGEVLECRI 506
Query: 156 -LNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
CD G V+++++E A A A +GRF+ GRP+ ++
Sbjct: 507 DHKKCD-------GKVWIKYKEAIYAKKASQAFKGRFFGGRPVQIDL 546
>gi|66363398|ref|XP_628665.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
gi|46229660|gb|EAK90478.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
Length = 563
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 104 LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEI-ECLNVCDNL 162
LLLSNM+ + + + I++ E+ D+ EE K+G + EC D
Sbjct: 464 LLLSNMFTEQSI-------KESMEEDETIEQILEEIQADVEEECGKYGTLLECF--LD-- 512
Query: 163 ADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREAT 211
+ M GNV+V++ E+A+ A GRF++GR + V F +F +A
Sbjct: 513 KEKMDGNVWVKYSRPEEASKAKMVFHGRFFAGRKLNVSFIKDEEFPKAV 561
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 89 DRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELS 148
++ L +P + L LSNM+ PG D + Q +D+ EE +
Sbjct: 416 NQAMNLPTQPLATHCLQLSNMFSPQSENEPGWDIEIQ---------------DDVMEECN 460
Query: 149 KFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
K G I + V N GNVYV+ A AA++AL GR+++G+ I + P+ +
Sbjct: 461 KHGGIVHIYVDKNSPQ---GNVYVKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTY 516
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 92 SRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFG 151
S L+N I+P L+L NM+ +P ++ G DP + F D ED+ EE SK+G
Sbjct: 914 SALNN---ITPNLVLCNMF------SPNDESIGS--DP----DFFTDIIEDVKEECSKYG 958
Query: 152 EIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREAT 211
I + + + ++ G +Y+++ +++ A L GR++ G +I + + ++T
Sbjct: 959 SIAKIWLD---SKNIDGKIYIKYATPDESLKAFQFLNGRYFGG-SLISAYFITAEVWDST 1014
Query: 212 C 212
C
Sbjct: 1015 C 1015
>gi|261196608|ref|XP_002624707.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595952|gb|EEQ78533.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609528|gb|EEQ86515.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ER-3]
gi|327350238|gb|EGE79095.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 570
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ +E SK+GE+ L V +N +G +YV+F E A AL AL G
Sbjct: 488 DDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVEFDNSESATKALKALAG 547
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 548 RKFQDRTVVTTY 559
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 127 IDPRKI--QEHFEDFYEDIFEELSKFGEIECLNV-----CDNLADHMIGNVYVQFREEEQ 179
++P ++ E +ED ED+ EE SK+GE+ + + D +G V+V F+
Sbjct: 430 VEPEELVDDEEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSD 489
Query: 180 AAAALHALQGRFYSGRPIIVEF 201
A A AL GR + G+ +I +
Sbjct: 490 AEKAFAALTGRRFGGKSVIANY 511
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 110 YQRPDMITPGVDAQGQPIDPRKIQEHFE-----------DFYEDIFEELSKFGEIECLNV 158
Q P + P +D G P + ++ F+ D ED+ +E SKFG ++ + V
Sbjct: 315 LQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYV 374
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
N A G V+++F + A +A AL GR+++G+ I F
Sbjct: 375 DKNSA----GFVFLRFENTQAAISAQRALHGRWFAGKMITATF 413
>gi|380481793|emb|CCF41637.1| U2 snRNP auxilliary factor [Colletotrichum higginsianum]
Length = 550
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 127 IDPRKIQEH--FEDFYEDIFEELSKFGEIECLNVCDNLA----DHMIGNVYVQFREEEQA 180
+ P ++ ++ +E+ ED+ EE SKFG + + + + +G ++V+F E A
Sbjct: 459 VTPEELMDNDDYEEIKEDVQEECSKFGNVLDIKIPRPVGGSRQSAGVGKIFVRFENTESA 518
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDF 207
AL AL GR ++ R ++ + P +F
Sbjct: 519 KKALQALAGRKFADRTVVTTYFPEENF 545
>gi|240279650|gb|EER43155.1| splicing factor u2af large subunit [Ajellomyces capsulatus H143]
gi|325092783|gb|EGC46093.1| splicing factor u2af large subunit [Ajellomyces capsulatus H88]
Length = 572
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ +E SK+GE+ L V +N +G +YV+F E A AL AL G
Sbjct: 490 DDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVKFDNSESATKALRALAG 549
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 550 RKFQDRTVVTTY 561
>gi|389745686|gb|EIM86867.1| hypothetical protein STEHIDRAFT_57258 [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 104 LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV----- 158
LL+ NM D+I + D EDI EE++ +G+++ + +
Sbjct: 291 LLMLNMVTPEDLID---------------DSEYADLLEDIREEVANYGDVDDVRIPRPDA 335
Query: 159 --CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPII 198
D A +G VYV++++ E AA + AL GR ++GR II
Sbjct: 336 QRADEAAG--VGRVYVRYKDAEGAAKGMQALAGRSFAGRSII 375
>gi|91080945|ref|XP_974350.1| PREDICTED: similar to CG4806 CG4806-PA [Tribolium castaneum]
gi|270005371|gb|EFA01819.1| hypothetical protein TcasGA2_TC007421 [Tribolium castaneum]
Length = 584
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
FE E++ E ++FGE++ + V ++G +VQF+ ++AA A H L G+ + GR
Sbjct: 45 FEATEENLKEHFAQFGEVQEVKVLKKEDGKLVGCGFVQFKLVQKAAKARHHLNGKPFLGR 104
Query: 196 PIIVEFS 202
I V+F+
Sbjct: 105 EIEVDFA 111
>gi|225562835|gb|EEH11114.1| splicing factor u2af large subunit [Ajellomyces capsulatus G186AR]
Length = 571
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ +E SK+GE+ L V +N +G +YV+F E A AL AL G
Sbjct: 489 DDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVKFDNSESATKALRALAG 548
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 549 RKFQDRTVVTTY 560
>gi|389642205|ref|XP_003718735.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
gi|351641288|gb|EHA49151.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
Length = 620
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 19/114 (16%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLN 157
P +SP L L NM +++ + +E+ ED+ EE +K+G + L
Sbjct: 517 PDLSPVLQLLNMVTADELMD---------------NDDYEEICEDVQEECAKYGTVIELK 561
Query: 158 V----CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
V +G +YV+F E + AL AL GR ++ R ++ + P +F
Sbjct: 562 VPRPSSGAKQAAGVGKIYVKFDSIESSTKALKALGGRKFADRTVVTTYFPEENF 615
>gi|326475623|gb|EGD99632.1| splicing factor u2af large subunit [Trichophyton tonsurans CBS
112818]
gi|326483752|gb|EGE07762.1| splicing factor U2AF subunit [Trichophyton equinum CBS 127.97]
Length = 565
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADH----MIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ EE SK+G +E L + A +G +YV+F E A AL AL G
Sbjct: 474 EDYEEICEDVQEECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDTPEAATKALQALAG 533
Query: 190 RFYSGRPIIVEFSPVTDFREAT 211
R + R ++ + F EA+
Sbjct: 534 RKFQDRTVVTTY-----FSEAS 550
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 19/101 (18%)
Query: 101 SPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCD 160
S L+L NM+ D I P D D ED+ E SK G ++ + V
Sbjct: 505 SECLMLKNMFDPKDEIEPDFDL---------------DIKEDVEAECSKLGTLKHIYVDK 549
Query: 161 NLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
A G VY++F + + A +A AL GR+++G+ I F
Sbjct: 550 KSA----GFVYLRFEDTQSAISAQQALHGRWFAGKMITASF 586
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 127 IDPRKI--QEHFEDFYEDIFEELSKFGEIECLNV-----CDNLADHMIGNVYVQFREEEQ 179
++P ++ E +ED ED+ EE SK+GE+ + + D +G V+V F+
Sbjct: 446 VEPEELVDDEEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSD 505
Query: 180 AAAALHALQGRFYSGRPIIVEF 201
A A AL GR + G+ +I +
Sbjct: 506 AEKAFAALTGRRFGGKSVIANY 527
>gi|327297188|ref|XP_003233288.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
gi|326464594|gb|EGD90047.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
Length = 563
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADH----MIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ EE SK+G +E L + A +G +YV+F E A AL AL G
Sbjct: 474 EDYEEICEDVQEECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDTPESATKALQALAG 533
Query: 190 RFYSGRPIIVEFSPVTDFREAT 211
R + R ++ + F EA+
Sbjct: 534 RKFQDRTVVTTY-----FSEAS 550
>gi|154280004|ref|XP_001540815.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412758|gb|EDN08145.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ +E SK+GE+ L V +N +G +YV+F E A AL AL G
Sbjct: 489 DDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVKFDNSESATKALRALAG 548
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 549 RKFQDRTVVTTY 560
>gi|302656965|ref|XP_003020217.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
gi|291184026|gb|EFE39599.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
Length = 486
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADH----MIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ EE SK+G +E L + A +G +YV+F E A AL AL G
Sbjct: 412 EDYEEICEDVQEECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDSPESATKALQALAG 471
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 472 RKFQDRTVVTTY 483
>gi|302511201|ref|XP_003017552.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
gi|291181123|gb|EFE36907.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
Length = 501
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADH----MIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ EE SK+G +E L + A +G +YV+F E A AL AL G
Sbjct: 412 EDYEEICEDVQEECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDSPESATKALQALAG 471
Query: 190 RFYSGRPIIVEFSPVTDFREAT 211
R + R ++ + F EA+
Sbjct: 472 RKFQDRTVVTTY-----FSEAS 488
>gi|342873171|gb|EGU75391.1| hypothetical protein FOXB_14096 [Fusarium oxysporum Fo5176]
Length = 661
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 80 FKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDF 139
F +G S+ N S L L NM +++ + +E+
Sbjct: 451 FDVGITAISGLASQTANEVESSRVLQLLNMVTAEELLD---------------NDDYEEI 495
Query: 140 YEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
ED+ EE SKFG+I + V + +G ++V++ + E A AL AL GR ++ R
Sbjct: 496 CEDVKEECSKFGKIIDVKVPRPTGGSRQSAGVGKIFVKYEKAEDTAKALQALAGRKFADR 555
Query: 196 PIIVEFSP 203
++ + P
Sbjct: 556 TVVTTYFP 563
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLAD---HMIGNVYVQFREEEQAAAALHALQGR 190
+ +ED DI +E +K+G+++ L + + D G V+V+F E AL+AL GR
Sbjct: 346 DEYEDIRTDIKQECAKYGKVKSLKIPRPIGDPPQTGCGKVFVRFESIEDCKKALNALSGR 405
Query: 191 FYSGRPIIVEF 201
+SGR ++ F
Sbjct: 406 KFSGRIVMTSF 416
>gi|194704666|gb|ACF86417.1| unknown [Zea mays]
gi|414871304|tpg|DAA49861.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 537
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Query: 95 HNRPTISPT--LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGE 152
N +PT LLL NM+ P D D +D+ +E SKFG
Sbjct: 435 QNVTMSTPTEFLLLKNMFDPALETDPDFDL---------------DIRDDVQDECSKFGA 479
Query: 153 IECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
++ + V N A G VY+QF AA A +AL GR+++G+ I F ++
Sbjct: 480 VKHIFVDKNTA----GFVYLQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEY 530
>gi|212539736|ref|XP_002150023.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067322|gb|EEA21414.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 551
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ +E SK+G++ L + + +G ++V+F E A AL AL G
Sbjct: 469 EDYEEILEDVQDECSKYGQVLDLKIPRPAGGSRQSAGVGKIFVKFDTVESATNALKALAG 528
Query: 190 RFYSGRPIIVEFSPVTDF 207
R +S R ++ + P F
Sbjct: 529 RKFSDRTVVTTYFPEESF 546
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 16/114 (14%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
I+P L+L NM+ +P ++ G DP + F D ED+ EE SK+G + + +
Sbjct: 779 NITPNLVLCNMF------SPNDESIGS--DP----DFFTDIIEDVKEECSKYGSVTKIWL 826
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATC 212
++ G +Y+++ +++ A L GR++ G +I + T+ ++ C
Sbjct: 827 D---TKNIDGKIYIKYANNDESLKAFQFLNGRYFGG-SLINAYFLTTEMWDSIC 876
>gi|260942693|ref|XP_002615645.1| hypothetical protein CLUG_04527 [Clavispora lusitaniae ATCC 42720]
gi|238850935|gb|EEQ40399.1| hypothetical protein CLUG_04527 [Clavispora lusitaniae ATCC 42720]
Length = 559
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----------CDNLADHMIGNVYVQFREEEQAAAA 183
E ++ Y DIFEE FG + L + + + + +G V+V++ +E+ A +A
Sbjct: 471 ETYKFIYSDIFEEAKTFGTVLSLKIPKPSYKKSPGVEEVNEPGVGKVFVEYEDEKTALSA 530
Query: 184 LHALQGRFYSGRPIIVEF 201
+ L GR Y+ R ++ F
Sbjct: 531 IMGLAGRSYNDRTVLCAF 548
>gi|315044445|ref|XP_003171598.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|311343941|gb|EFR03144.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
Length = 565
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADH----MIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ EE SK+G +E L + A +G +Y++F E A AL AL G
Sbjct: 483 EDYEEICEDVQEECSKYGVVEELKIPRPSAGSRQAAGVGKIYIKFDTPESATKALQALAG 542
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 543 RKFQDRTVVTTY 554
>gi|347842431|emb|CCD57003.1| hypothetical protein [Botryotinia fuckeliana]
Length = 606
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
E +E+ ED+ EE K+G++ + V + +G ++V+F + A AL AL G
Sbjct: 524 EDYEEICEDVKEECEKYGKVLEMKVPRPTGGSRQSTGVGKIFVKFDTPDSAGKALKALAG 583
Query: 190 RFYSGRPIIVEFSPVTDFREATC 212
R ++ R ++ + P +F C
Sbjct: 584 RKFADRTVVTTYFPEENFEVGAC 606
>gi|406699650|gb|EKD02849.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Trichosporon asahii var. asahii CBS 8904]
Length = 487
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 23/89 (25%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV------------CDNLA-----------DHMIGNV 170
+ + D EDI +E SKFGE+E + + D+ A ++ +G V
Sbjct: 364 QDYADILEDIRDECSKFGEVEGVRIPRPVPKSTKWEPSDSAAQTAEKNRRIDQENGVGRV 423
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIV 199
YV + + E A A+ AL GR ++GR I+V
Sbjct: 424 YVMYADTESAVKAMRALGGRQFAGRTILV 452
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 98 PTISPTL---------LLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE----------- 137
P ++P + L Q P I P VD G P + ++ F+
Sbjct: 477 PIVAPLISGSAPAFPGLPGASVQLPGAI-PSVDTIGVPSECLLLKNMFDPSIETEPDFDL 535
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D ED+ E SKFG ++ + V N A G VY++F + A +A AL GR+++G+ I
Sbjct: 536 DIKEDVQLECSKFGNLQHIYVDKNSA----GFVYLRFENTQSAISAQRALHGRWFAGKMI 591
Query: 198 IVEF 201
F
Sbjct: 592 TATF 595
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ EE KFG I L + + +G +Y+++ +QA AL +L G
Sbjct: 512 DDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIYIKYENSDQATKALKSLAG 571
Query: 190 RFYSGRPIIVEFSPVTDF 207
R ++ R ++ + P +F
Sbjct: 572 RKFADRTVVATYFPEENF 589
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D D+ EE +K G + + V N A+ GNVYV+ A +A++AL GRF+ G+ I
Sbjct: 443 DIQRDVIEECNKHGGVVHIYVDKNSAE---GNVYVKCPSIPAAMSAVNALHGRFFGGKMI 499
Query: 198 IVEFSPVTDF 207
+ P+ +
Sbjct: 500 TAAYVPLPTY 509
>gi|393236224|gb|EJD43774.1| hypothetical protein AURDEDRAFT_137718 [Auricularia delicata
TFB-10046 SS5]
Length = 389
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV--------------------CDNLADHMIGNVYVQ 173
E F + YED+ EE +KFG +E L + D A +G VYV+
Sbjct: 272 EEFAELYEDVKEECAKFGAVEDLRIPRPAKRAGPKYGPAAVEAQRVDEAAG--VGRVYVK 329
Query: 174 FREEEQAAAALHALQGRFYSGRPIIVEF 201
+ + A+ AL +L GR ++GR II
Sbjct: 330 YYKSSDASTALRSLAGRSFAGRSIIASL 357
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D D+ EE +K G + + V N A+ GNVYV+ A +A++AL GRF+ G+ I
Sbjct: 416 DIQRDVIEECNKHGGVVHIYVDKNSAE---GNVYVKCPSIPAAMSAVNALHGRFFGGKMI 472
Query: 198 IVEFSPVTDF 207
+ P+ +
Sbjct: 473 TAAYVPLPTY 482
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 114 DMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVC---DNLADHMIGNV 170
+M+TP + +DP++ +E+ ED+ EE SK+G++E L + + +G +
Sbjct: 255 NMVTPE-----ELMDPQE----YEEIQEDVHEECSKYGKVEELKIPRPQPPKENKGVGKI 305
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+V++ E A AL AL GR ++ R ++V F
Sbjct: 306 FVKYDTPESAQKALRALAGRKFADRTVVVTF 336
>gi|295663747|ref|XP_002792426.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279096|gb|EEH34662.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 567
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ +E SK+G++ L V +N +G +YV+F E A+ AL AL G
Sbjct: 485 DDYEEICDDVRDECSKYGQVVELKVPRPTGNNKQSAGVGKIYVKFDNSESASKALKALAG 544
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 545 RKFQDRTVVTTY 556
>gi|336368252|gb|EGN96595.1| hypothetical protein SERLA73DRAFT_93106 [Serpula lacrymans var.
lacrymans S7.3]
Length = 396
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVC-DNLADHM-------IGNVYVQFREEEQAAAALH 185
+ + D YED+ EE S +G +E L + + D + +G VYV++ + + A AL
Sbjct: 293 QEYGDLYEDVKEECSVYGAVEDLRIPRPSAMDAIRQDEAAGVGRVYVKYIDADSANNALK 352
Query: 186 ALQGRFYSGRPIIVEF 201
AL GR ++GR II
Sbjct: 353 ALAGRSFAGRSIIATL 368
>gi|350295506|gb|EGZ76483.1| hypothetical protein NEUTE2DRAFT_76972 [Neurospora tetrasperma FGSC
2509]
Length = 592
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ EE KFG I L + + +G +++++ +QA AL AL G
Sbjct: 510 DDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIFIKYENSDQATKALKALAG 569
Query: 190 RFYSGRPIIVEFSPVTDF 207
R ++ R ++ + P +F
Sbjct: 570 RKFADRTVVATYFPEENF 587
>gi|242803779|ref|XP_002484243.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
gi|218717588|gb|EED17009.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
Length = 543
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
T S L S + Q +M+T D + +E+ ED+ +E SK+G++ + +
Sbjct: 435 TTSADLETSRILQLLNMVT---------ADELINNDDYEEILEDVQDECSKYGQVLDVKI 485
Query: 159 ----CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
+ +G +YV+F E A AL AL GR +S R ++ + P F
Sbjct: 486 PRPAGGSRQSAGVGKIYVKFDSVESATNALKALAGRKFSDRTVVTTYFPEESF 538
>gi|344297715|ref|XP_003420542.1| PREDICTED: HIV Tat-specific factor 1 homolog [Loxodonta africana]
Length = 743
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I+ L + D H G V FR+ E+A +H L GR++ GR I E
Sbjct: 289 EDLRVECSKFGQIKKLILFDR---HPDGVASVSFRDPEEADYCIHTLDGRWFGGRQITAE 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|336465212|gb|EGO53452.1| hypothetical protein NEUTE1DRAFT_92746 [Neurospora tetrasperma FGSC
2508]
Length = 584
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ EE KFG I L + + +G +++++ +QA AL AL G
Sbjct: 502 DDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIFIKYENSDQATKALKALAG 561
Query: 190 RFYSGRPIIVEFSPVTDF 207
R ++ R ++ + P +F
Sbjct: 562 RKFADRTVVATYFPEENF 579
>gi|225677913|gb|EEH16197.1| splicing factor U2AF 65 kDa subunit ) [Paracoccidioides
brasiliensis Pb03]
gi|226287345|gb|EEH42858.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 567
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ +E SK+G++ L V +N +G +YV+F E A+ AL AL G
Sbjct: 485 DDYEEICDDVRDECSKYGQVVELKVPRPTGNNKQSAGVGKIYVKFDNSESASKALKALAG 544
Query: 190 RFYSGRPIIVEF 201
R + R ++ +
Sbjct: 545 RKFQDRTVVTTY 556
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D D+ EE +K G + + V N + GNVYV+ A AA++AL GR+++G+ I
Sbjct: 439 DIQHDVIEECNKHGGVVHIYVDKNSTE---GNVYVKCPSIPAAMAAVNALHGRYFAGKMI 495
Query: 198 IVEFSPVTDF 207
+ P+ +
Sbjct: 496 TAAYVPLPTY 505
>gi|82705399|ref|XP_726954.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482574|gb|EAA18519.1| G-patch domain, putative [Plasmodium yoelii yoelii]
Length = 496
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 132 IQEHFEDFYEDIFEELSKFGEIECLNVC--DNLADHMIGNVYVQFREEEQAAAALHALQG 189
I E + E+I EE SKFG + +N+ NL+D + ++ ++ +QA A + +
Sbjct: 412 IDEVDDTLKEEIEEEASKFGNLLNINIITDSNLSDALAVKIFCEYESRDQAKNAFNTFKE 471
Query: 190 RFYSGRPIIVEF 201
R ++GR +IV F
Sbjct: 472 RTFAGRKVIVSF 483
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 127 IDPRKIQE--HFEDFYEDIFEELSKFGEIECLNVCDNL----ADHMIGNVYVQFREEEQA 180
+ P ++Q+ +E+ EDI +E SK+G++ L + + ++ +G VYV+F E
Sbjct: 455 VTPEELQDDDEYEEISEDIRDECSKYGKVLDLKIPRGIGGSRSNFGVGKVYVRFETEMSC 514
Query: 181 AAALHALQGRFYSGRPIIVEFSP 203
A+ L GR +S R ++ F P
Sbjct: 515 LKAMKDLAGRKFSDRTVLTSFYP 537
>gi|85111663|ref|XP_964044.1| hypothetical protein NCU03039 [Neurospora crassa OR74A]
gi|28925805|gb|EAA34808.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 584
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV----CDNLADHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ EE KFG I L + + +G +++++ +QA AL AL G
Sbjct: 502 DDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIFIKYENSDQATKALKALAG 561
Query: 190 RFYSGRPIIVEFSPVTDF 207
R ++ R ++ + P +F
Sbjct: 562 RKFADRTVVATYFPEENF 579
>gi|334311921|ref|XP_001368201.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 555
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ + V D H G V ++E E+A + AL GR++ GR + VE
Sbjct: 401 EDLRSECEKFGQVKKVLVFDR---HPDGVASVSYKEPEEADLCIQALNGRWFGGRQLNVE 457
Query: 201 -FSPVTDFR 208
+ VTDF+
Sbjct: 458 VWDGVTDFQ 466
>gi|241951030|ref|XP_002418237.1| RNA-binding protein, putative; splicing factor U2AF. large subunit,
putative [Candida dubliniensis CD36]
gi|223641576|emb|CAX43537.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 749
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 142 DIFEELSKFGEIECLNVCDNLADHM-----------IGNVYVQFREEEQAAAALHALQGR 190
D++ E SK+GE+ + + H +G +Y++F++E A AA+ L G+
Sbjct: 669 DMYNEASKYGEVVSIRIPRPPRSHTPGILQFNTSTGLGTIYIEFKDERTALAAMMELAGK 728
Query: 191 FYSGRPIIVEFSPVTDF 207
Y+ R ++ F DF
Sbjct: 729 SYNDRTVLATFYDFDDF 745
>gi|115435210|ref|NP_001042363.1| Os01g0209500 [Oryza sativa Japonica Group]
gi|56201520|dbj|BAD73039.1| putative Not4-Np [Oryza sativa Japonica Group]
gi|113531894|dbj|BAF04277.1| Os01g0209500 [Oryza sativa Japonica Group]
Length = 799
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 147 LSKFGEIECLNVCDNL-ADHMI---GNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
L ++G+IE + + DN+ A+ I G VYV F EE+A + A+ G GRP+ F
Sbjct: 93 LGQYGKIESI-IIDNIGANQQIPDSGRVYVTFSREEEAFRCIEAVNGFILDGRPLKATFG 151
Query: 203 PVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNK 241
VT + C + N R C+++H K D+ K
Sbjct: 152 -VTRY----CHVWLSNKVCRKPICSYVHQKAPPEDICTK 185
>gi|326428095|gb|EGD73665.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Salpingoeca sp. ATCC 50818]
Length = 415
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 127 IDPRKIQEHFEDFYEDIFEELSKFGEIECLNVC----DNLADHM--IGNVYVQFREEEQA 180
+D + E +ED DI EE KFGEI + + +N + + +G +Y+++ ++A
Sbjct: 322 VDELRDDEEYEDICADIREECEKFGEILDMKIPRPSKENPEEQVPGVGKIYLKYASADEA 381
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEE 217
A AL GR ++ R ++ F P F T FEE
Sbjct: 382 RIAARALSGRSFAERTVVTSFWPEDKFDAGT---FEE 415
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query: 104 LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE-DFYEDIFEELSKFGEIECLNVCDNL 162
LLL NM+ P V+ DP F+ D +D+ EE SKFG+I + V N
Sbjct: 461 LLLKNMFD------PAVET-----DP-----DFDLDIKDDVREECSKFGQIRHIFVDKNT 504
Query: 163 ADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
A G VY++F A A ALQGR+++G+ I F
Sbjct: 505 A----GFVYLRFDSITAAMGAQKALQGRWFAGKMITATF 539
>gi|407926473|gb|EKG19440.1| hypothetical protein MPH_03303 [Macrophomina phaseolina MS6]
Length = 397
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D +DI EE SKFGE+E + V + D G V V+F E QA + A GR + GR I
Sbjct: 282 DIRDDISEEASKFGEVEVVWVFNQEPD---GVVVVRFSEPAQAQECVKAFNGRAFDGRII 338
>gi|242082602|ref|XP_002441726.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
gi|241942419|gb|EES15564.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
Length = 479
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
P + R ++ + D+ EE +KFG ++ + VC+N H G + V+F++ + A +
Sbjct: 376 PAELRADEDLLSELEVDVREECTKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIE 432
Query: 186 ALQGRFYSGRPI 197
+ GR++ GR I
Sbjct: 433 KMNGRWFGGRQI 444
>gi|395860822|ref|XP_003802703.1| PREDICTED: HIV Tat-specific factor 1 homolog [Otolemur garnettii]
Length = 767
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A +H L GR++ GR I E
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDAEEADYCIHTLNGRWFGGRQITAE 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|223946691|gb|ACN27429.1| unknown [Zea mays]
Length = 316
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
P + R +E + D+ EE KFG ++ + VC+N H G + V+F++ + A +
Sbjct: 213 PAELRADEELLSELETDVREECIKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIE 269
Query: 186 ALQGRFYSGRPI 197
+ GR+++G+ I
Sbjct: 270 KMNGRWFAGQQI 281
>gi|395331854|gb|EJF64234.1| hypothetical protein DICSQDRAFT_144911 [Dichomitus squalens
LYAD-421 SS1]
Length = 587
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 127 IDPRKIQ--EHFEDFYEDIFEELSKFGEIECLNV--------------------CDNLAD 164
+ P ++Q + + D ED+ EE K+GE+E L + AD
Sbjct: 461 VVPEELQDDQEYADILEDVKEECGKYGEVEDLRIPRPVKKDKAKWGEGGRDSALAQQRAD 520
Query: 165 HM--IGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VYV++ AA AL AL GR ++GR II
Sbjct: 521 EAAGVGRVYVKYASPRSAANALKALAGRSFAGRSIIATL 559
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE--EEQAAAALHALQGRFYSGR 195
D +D+ +E KFGE+ + V G+VY+ F+E EE A + AL GR+++GR
Sbjct: 377 DIQDDVEDEGRKFGEVRHVRVD---VKGPGGHVYMLFKEGEEEGAQKSAQALNGRWFAGR 433
Query: 196 PIIVEFSPVTDFREA 210
I+VE+ P+ + E+
Sbjct: 434 MIMVEYLPLARYLES 448
>gi|388517133|gb|AFK46628.1| unknown [Lotus japonicus]
Length = 162
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
+ ED+ EE +K G I+ + VC+N H G V V+F++ + A + + GR++ GR I
Sbjct: 72 ELEEDVKEECTKLGPIDSVKVCEN---HPQGVVLVRFKDRKDAQTCIDTMNGRWFGGRQI 128
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 116 ITPGV-DAQGQP---------IDPR-KIQEHFE-DFYEDIFEELSKFGEIECLNVCDNLA 163
I PGV D G P DP + ++ F+ D ED+ EE SKFG + + V N
Sbjct: 448 IIPGVIDPVGVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEECSKFGNLNHIYVDKN-- 505
Query: 164 DHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+G VY++F + A A AL GR+++G+ I +
Sbjct: 506 --SVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATY 541
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 19/107 (17%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLN 157
P + LLL NM+ + P E + D ED+ +E SK G + ++
Sbjct: 422 PIPTQCLLLKNMFDPAEETEP---------------EWWIDIGEDVKDECSKHGPVSHIH 466
Query: 158 VCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPV 204
V G VY++F E A+AA AL GR+++G+ I EF V
Sbjct: 467 VDK----ESRGFVYLKFGSTEGASAARQALHGRWFAGKMIAAEFQFV 509
>gi|403175591|ref|XP_003888994.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171670|gb|EHS64431.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 713
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHM-------------IGNVYVQFREEEQA 180
+ + + EDI +E K+G+IE + + + + +G V+V F + ++
Sbjct: 601 QEYGEILEDIRDECGKYGKIEGVRIPRPIKNEKGRIDLKASESVDGLGKVFVMFEKVDEC 660
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDFREAT 211
AAAL A+ GR ++GR II ++P E +
Sbjct: 661 AAALLAIAGRQFAGRVIICAYAPEDAMTEGS 691
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 17/101 (16%)
Query: 101 SPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCD 160
+ ++LSNMY D + F++ +D+ EE K+GE+ + +
Sbjct: 554 AANIVLSNMYTSEDYADN--------------NDFFDEIEDDVREECKKYGEVVKVYLNR 599
Query: 161 NLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
D G VYV+FR A A +LQGR+++G I V +
Sbjct: 600 RKPD---GKVYVKFRSNTDAQTAHKSLQGRYFAGNTIQVGY 637
>gi|413924809|gb|AFW64741.1| hypothetical protein ZEAMMB73_003429 [Zea mays]
Length = 475
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
P + R +E + D+ EE KFG ++ + VC+N H G + V+F++ + A +
Sbjct: 372 PAELRADEELLPELEADVREECIKFGPVDNVKVCEN---HPQGVILVRFKDRKDGAKCIE 428
Query: 186 ALQGRFYSGRPI 197
+ GR+++GR I
Sbjct: 429 KMNGRWFAGRQI 440
>gi|226496095|ref|NP_001141229.1| uncharacterized protein LOC100273316 [Zea mays]
gi|194703396|gb|ACF85782.1| unknown [Zea mays]
gi|413924810|gb|AFW64742.1| hypothetical protein ZEAMMB73_003429 [Zea mays]
Length = 460
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
P + R +E + D+ EE KFG ++ + VC+N H G + V+F++ + A +
Sbjct: 357 PAELRADEELLPELEADVREECIKFGPVDNVKVCEN---HPQGVILVRFKDRKDGAKCIE 413
Query: 186 ALQGRFYSGRPI 197
+ GR+++GR I
Sbjct: 414 KMNGRWFAGRQI 425
>gi|402073699|gb|EJT69251.1| splicing factor U2AF 50 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 623
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV------CDNLADHMIGNVYVQFREEEQAAAALHAL 187
+ +E+ +D+ EE SKFG I L + LA +G +YV+F E + AL AL
Sbjct: 541 DDYEEICDDVREECSKFGTILELKIPRPSGGARQLAG--VGKIYVKFDTIESSTEALKAL 598
Query: 188 QGRFYSGRPIIVEFSPVTDF 207
GR ++ R ++ + P +F
Sbjct: 599 AGRKFADRTVVTTYFPEENF 618
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 19/111 (17%)
Query: 98 PTI-SPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECL 156
P+I +P +LSNM+ + + G D R+IQ+ D+ EE +K G C+
Sbjct: 443 PSIATPCFMLSNMFDPTNETSSGWD--------REIQD-------DVIEECNKHGG--CV 485
Query: 157 NVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
++ + + + G VYV+ + A A++AL GR+++G+ I + P+ ++
Sbjct: 486 HIYVDKTNPL-GVVYVKCATVQIAQMAVNALHGRWFAGKMITAAYVPLANY 535
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
+D FE+ E + V D +++ G YV+FR EE AAL L G+ G P+IV+
Sbjct: 226 KDFFEKAGPVAEAQI--VKDRVSNRSKGVGYVEFRSEESVTAALQ-LTGQKLLGIPVIVQ 282
Query: 201 FSPVTDFREATCRQFEENNCNRGG------YCNFMHVKLIGRDLRN 240
+ R+ +N N G Y +H + DLRN
Sbjct: 283 MTEAEKNRQVRSTAEATSNGNSTGVPFHRLYVGNIHFSITESDLRN 328
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
HF D+ FGE+E + + + G +VQFR+ +QA AL + G +G
Sbjct: 318 HFSITESDLRNVFEPFGELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKMNGFDLAG 377
Query: 195 RPIIV-----EFSP 203
RPI V +F+P
Sbjct: 378 RPIRVGLGNDKFTP 391
>gi|414588676|tpg|DAA39247.1| TPA: hypothetical protein ZEAMMB73_120405 [Zea mays]
Length = 544
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
P + R +E + D+ EE KFG ++ + VC+N H G + V+F++ + A +
Sbjct: 441 PAELRADEELLSELETDVREECIKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIE 497
Query: 186 ALQGRFYSGRPI 197
+ GR+++G+ I
Sbjct: 498 KMNGRWFAGQQI 509
>gi|325189076|emb|CCA23603.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189678|emb|CCA24162.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 526
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 129 PRKIQ-EHFE-DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
P++I+ E +E + EDI +EL K GEI + + H G V V+F AA L
Sbjct: 411 PQEIKDETYEKEILEDIEQELVKLGEINKITL---FGHHQDGVVIVKFASSGSAAKCLEV 467
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEEN 218
+ GRF++GR I ++ D+ + E+N
Sbjct: 468 MDGRFFAGRKIDCQYWDGEDYTHRESKSEEQN 499
>gi|171684585|ref|XP_001907234.1| hypothetical protein [Podospora anserina S mat+]
gi|170942253|emb|CAP67905.1| unnamed protein product [Podospora anserina S mat+]
Length = 585
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLA----DHMIGNVYVQFREEEQAAAALHALQG 189
+ +E+ +D+ EE KFG+I L + + +G ++++F E A AL AL G
Sbjct: 503 DDYEEIRDDVQEECEKFGKILSLKIPRPVGGSRQSAGVGKIFIKFENHEAANKALRALAG 562
Query: 190 RFYSGRPIIVEFSPVTDF 207
R ++ R ++ + P +F
Sbjct: 563 RKFADRTVVTTYFPEENF 580
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 19/117 (16%)
Query: 91 CSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKF 150
+ L T S LLL NM+ P D D +D+ EE S+F
Sbjct: 457 TANLLGVGTPSECLLLKNMFDPTAESEPTFDL---------------DIRDDVEEECSRF 501
Query: 151 GEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
G+++ + V N A G VY++F + E A A AL GR+++G+ I F + +
Sbjct: 502 GKLKHIYVDRNSA----GFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSY 554
>gi|195124159|ref|XP_002006561.1| GI21125 [Drosophila mojavensis]
gi|193911629|gb|EDW10496.1| GI21125 [Drosophila mojavensis]
Length = 427
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+ ++D DI +E +K+G+++ L + D+ G V+V+F + AL+AL GR
Sbjct: 345 DEYDDIRTDIKQECAKYGKVKSLKIPRPGDDSIQGGCGKVFVRFESIDDCKKALNALSGR 404
Query: 191 FYSGRPIIVEF 201
+SGR ++ F
Sbjct: 405 KFSGRIVMTSF 415
>gi|195057468|ref|XP_001995263.1| GH23055 [Drosophila grimshawi]
gi|193899469|gb|EDV98335.1| GH23055 [Drosophila grimshawi]
Length = 453
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAALHALQGRFY 192
+ED +DI EE +KFG++ + + + G VYV+F + AL AL GR +
Sbjct: 373 YEDIRKDIKEECAKFGKVISIKIPRPFGESPQPGCGKVYVRFETTDVCKKALKALSGRRF 432
Query: 193 SGRPIIVEFSPVTDFR 208
SGR ++ F F+
Sbjct: 433 SGRIVMTSFYDPNKFK 448
>gi|226509668|ref|NP_001142242.1| uncharacterized protein LOC100274411 [Zea mays]
gi|194690874|gb|ACF79521.1| unknown [Zea mays]
gi|194707772|gb|ACF87970.1| unknown [Zea mays]
gi|414871307|tpg|DAA49864.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
gi|414871308|tpg|DAA49865.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 318
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D +D+ +E SKFG ++ + V N A G VY+QF AA A +AL GR+++G+ I
Sbjct: 246 DIRDDVQDECSKFGAVKHIFVDKNTA----GFVYLQFDSVTAAAKAQNALHGRWFAGKMI 301
Query: 198 IVEF 201
F
Sbjct: 302 TATF 305
>gi|328862941|gb|EGG12041.1| hypothetical protein MELLADRAFT_41759 [Melampsora larici-populina
98AG31]
Length = 397
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 127 IDPRKI--QEHFEDFYEDIFEELSKFGEIECLNV---CDNLADHM----------IGNVY 171
++P ++ E +++ EDI EE SK+G+IE + + N M +G V+
Sbjct: 276 VNPEELVDDEEYKEILEDIKEECSKYGQIEDVKIPRPAKNEKGRMDLKSSESIEGLGKVF 335
Query: 172 VQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
++F E A AL A+ GR ++GR II ++
Sbjct: 336 IKFERIEDCAQALSAIAGRQFAGRVIICAYA 366
>gi|294462032|gb|ADE76571.1| unknown [Picea sitchensis]
Length = 203
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D ED+ +E SKFG + + V H G+VY++F A A AL GR+++G+ I
Sbjct: 130 DIKEDVQDECSKFGAVRHIFV----DKHSAGHVYLRFDSATSAIGAQRALHGRWFAGKMI 185
Query: 198 IVEFSP 203
F P
Sbjct: 186 TATFMP 191
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 110 YQRPDMITPGVDAQGQPIDPRKIQEHFE-----------DFYEDIFEELSKFGEIECLNV 158
Q P + +P +D G P + ++ F+ D ED+ E SKFG ++ + V
Sbjct: 234 LQIPMLTSPTIDTIGTPSECLLLKNMFDPEDEKEPDFDLDVKEDVEAECSKFGNLKHIYV 293
Query: 159 CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
A G VY++F + A +A AL GR+++G+ I F
Sbjct: 294 DKRSA----GFVYLRFENTQPAISAQRALHGRWFAGKMITASF 332
>gi|402590758|gb|EJW84688.1| hypothetical protein WUBG_04401 [Wuchereria bancrofti]
Length = 477
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAAL 184
D K E +ED EDI EE +K+G ++ L + + +G V+V+F +++ A
Sbjct: 390 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 449
Query: 185 HALQGRFYSGRPIIVEF 201
AL GR ++ R ++ +
Sbjct: 450 AALTGRKFANRTVVTSY 466
>gi|410904425|ref|XP_003965692.1| PREDICTED: RNA-binding protein 8A-like [Takifugu rubripes]
Length = 173
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 135 HFEDFYEDIFEELSKFGEIECLNV-CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYS 193
H E EDI ++ S+FGEI+ LN+ D ++ G V++ ++A AA+ L G+
Sbjct: 79 HEEATEEDIHDKFSEFGEIKNLNLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMM 138
Query: 194 GRPIIVEFSPV 204
G+PI V++ V
Sbjct: 139 GQPISVDWGFV 149
>gi|312085420|ref|XP_003144672.1| U2af splicing factor protein 1 [Loa loa]
Length = 143
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAAL 184
D K E +ED EDI EE +K+G ++ L + + +G V+V+F +++ A
Sbjct: 56 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 115
Query: 185 HALQGRFYSGRPIIVEF 201
AL GR ++ R ++ +
Sbjct: 116 AALTGRKFANRTVVTSY 132
>gi|356576634|ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 500
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 135 HFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
H E ED+ EE +K G ++ + +C+N H G V V+F++ + A + + GR++ G
Sbjct: 408 HLE-LEEDVKEECTKLGPVDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGG 463
Query: 195 RPI 197
R I
Sbjct: 464 RQI 466
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 125 QPIDPRKIQEHFED-----FYEDIFEELSKFGEIECLNV-----CDNLADHMIGNVYVQF 174
Q ++ I++ FED Y+D+ E K G +E + + + IG V+V+F
Sbjct: 378 QLLNMVSIEDLFEDDIVDDLYQDVMTECEKIGPVEKIEIPKPCKTTGICPPCIGKVFVKF 437
Query: 175 REEEQAAAALHALQGRFYSGRPIIVEFSPVTDF 207
+ +A A ++L GR Y+ R +I F P F
Sbjct: 438 KYMLKAKKARYSLNGRTYNRRTVIASFYPEDKF 470
>gi|327284085|ref|XP_003226769.1| PREDICTED: serine/threonine-protein kinase Kist-like [Anolis
carolinensis]
Length = 217
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
+E FED +DI EE SK+G+I L V + G+V+V++ + AA AL G+ +
Sbjct: 135 EEEFEDIVDDIKEECSKYGQIVSLFVPKE--NPGKGHVFVEYTNAGDSKAAQQALTGKRF 192
Query: 193 SGRPIIVEFSPVTDFREATCRQ 214
+ ++ F P++ ++ Q
Sbjct: 193 DCKFVVTTFYPLSAYKRGYLYQ 214
>gi|147898592|ref|NP_001083090.1| HIV Tat-specific factor 1 [Xenopus laevis]
gi|54038341|gb|AAH84628.1| LOC398736 protein [Xenopus laevis]
Length = 452
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ L + D H G V F+E + + AL GR++ GR + VE
Sbjct: 294 EDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEANEGDLCIQALNGRWFGGRQLAVE 350
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 351 PWDGVTDYQ 359
>gi|209882250|ref|XP_002142562.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558168|gb|EEA08213.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 261
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
+++ ++I+EE+SKFG + +NV ++ H G V V+F++ E A A+ L RF+ GR
Sbjct: 182 YKELEDEIYEEVSKFGTV--INVT-SIPRHPHGIVCVKFKKSEDAEIAVSYLNNRFFDGR 238
Query: 196 PI-IVEFSPVTDFREATC 212
I + TDF+ +T
Sbjct: 239 QIEAFLYDGKTDFKVSTL 256
>gi|37590291|gb|AAH59346.1| LOC398736 protein, partial [Xenopus laevis]
Length = 477
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ L + D H G V F+E + + AL GR++ GR + VE
Sbjct: 319 EDLRSECEKFGQVKKLLIFDQ---HPDGVASVAFKEANEGDLCIQALNGRWFGGRQLAVE 375
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 376 PWDGVTDYQ 384
>gi|331243454|ref|XP_003334370.1| splicing factor U2AF subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 600
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHM-------------IGNVYVQFREEEQA 180
+ + + EDI +E K+G+IE + + + + +G V+V F + ++
Sbjct: 488 QEYGEILEDIRDECGKYGKIEGVRIPRPIKNEKGRIDLKASESVDGLGKVFVMFEKVDEC 547
Query: 181 AAALHALQGRFYSGRPIIVEFSPVTDFREAT 211
AAAL A+ GR ++GR II ++P E +
Sbjct: 548 AAALLAIAGRQFAGRVIICAYAPEDAMTEGS 578
>gi|170575889|ref|XP_001893425.1| U2 auxiliary factor 65 kDa subunit [Brugia malayi]
gi|158600599|gb|EDP37742.1| U2 auxiliary factor 65 kDa subunit, putative [Brugia malayi]
Length = 502
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAAL 184
D K E +ED EDI EE +K+G ++ L + + +G V+V+F +++ A
Sbjct: 415 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 474
Query: 185 HALQGRFYSGRPIIVEF 201
AL GR ++ R ++ +
Sbjct: 475 AALTGRKFANRTVVTSY 491
>gi|390341852|ref|XP_792919.3| PREDICTED: splicing factor U2AF 50 kDa subunit-like
[Strongylocentrotus purpuratus]
Length = 386
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAALHALQGR 190
E ++D ED+ EE K+G++ L + L G +YV+F A AA AL GR
Sbjct: 305 EEYDDIVEDVKEECQKYGQVRSLEIPRPIPGLDVPGCGKIYVEFMTVMDAQAAQRALAGR 364
Query: 191 FYSGRPIIVEF 201
++ R ++ F
Sbjct: 365 KFANRTVVTSF 375
>gi|393909510|gb|EJD75480.1| hypothetical protein LOAG_17389 [Loa loa]
Length = 502
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAAL 184
D K E +ED EDI EE +K+G ++ L + + +G V+V+F +++ A
Sbjct: 415 DELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGKVFVEFNSKQECQKAQ 474
Query: 185 HALQGRFYSGRPIIVEF 201
AL GR ++ R ++ +
Sbjct: 475 AALTGRKFANRTVVTSY 491
>gi|348684506|gb|EGZ24321.1| hypothetical protein PHYSODRAFT_311360 [Phytophthora sojae]
Length = 529
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 139 FYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPII 198
EDI +E SK GE+ + + A H+ G V ++F AA + + GRF++GR +
Sbjct: 360 LQEDIHDECSKIGEVSKITL---FAKHVDGVVVIKFASSGSAARCVEVMNGRFFAGRKLE 416
Query: 199 VEFSPVTDF 207
F TD+
Sbjct: 417 CGFWDGTDY 425
>gi|335306576|ref|XP_003360505.1| PREDICTED: HIV Tat-specific factor 1 homolog [Sus scrofa]
Length = 760
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FRE E+A + L GR++ GR I E
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITAE 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 137 EDFYEDIFEELSKFGEIECLNVC------DNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+D +D+ +E SK+GE+ + + D+ A+H++ ++V+F+ +QA + +L GR
Sbjct: 556 DDLQQDVTDECSKYGEVVKVVIYTEQQGEDDNAEHIV-KIFVEFQTSKQAEKTVESLNGR 614
Query: 191 FYSGRPIIVEF 201
++ GR + E
Sbjct: 615 YFGGRAVKAEL 625
>gi|255080772|ref|XP_002503959.1| predicted protein [Micromonas sp. RCC299]
gi|226519226|gb|ACO65217.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLN 157
P S + L N+ D++T +E ++D ED+ +E SK G++ L
Sbjct: 228 PVESCVVCLGNLVTESDLVT---------------EEEYKDVCEDVLQECSKSGQVIELR 272
Query: 158 VCDNLADHMIG-NVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFRE 209
+ N D I N +V+F +A AA++ GR + GR + P DF E
Sbjct: 273 IPRNSIDANIKCNAFVRFATAAEAKAAVNLFNGRKFDGRSVSAVLWPEEDFDE 325
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
+D+ EE +K G + L+V + A GNVYV+ A AA+++L GR+++GR I
Sbjct: 430 DDVIEECNKHGGV--LHVYVDQASPQ-GNVYVKCPSIATAVAAVNSLHGRWFAGRVITAA 486
Query: 201 FSPVTDF 207
+ PV ++
Sbjct: 487 YVPVVNY 493
>gi|119482894|ref|XP_001261475.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
gi|119409630|gb|EAW19578.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
Length = 563
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 99 TISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV 158
T S L S + Q +M+TP + +D + +E+ +D+ EE SK+G++ L V
Sbjct: 455 TTSQDLESSRVLQLLNMVTPE-----ELLD----NDDYEEICDDVREECSKYGKVLDLKV 505
Query: 159 ----CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ +G +YV+F E A AL AL GR +S R ++ +
Sbjct: 506 PRPSGGSRQSPGVGKIYVKFDTVESATNALKALAGRKFSDRTVVTTY 552
>gi|302843264|ref|XP_002953174.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
gi|300261561|gb|EFJ45773.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
Length = 556
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 142 DIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
D+ EE S+FGE+ L+V + G VY++F + A AA AL GR+YSGR I+ E+
Sbjct: 459 DVREECSRFGEL--LHVWVDAKSK--GFVYLRFATTQSAEAAHRALHGRWYSGRQILAEY 514
Query: 202 SPVTDFREATCRQFEENNCNRGGYCN 227
+ + Q +++ C C+
Sbjct: 515 QFMPLYNSHFKLQAKQSTCAVLEVCS 540
>gi|449019593|dbj|BAM82995.1| similar to pre-mRNA splicing factor U2AF large chain [Cyanidioschyzon
merolae strain 10D]
Length = 1316
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 127 IDPRKI--QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHM-IGNVYVQFREEEQAAAA 183
+DP+ +E D DI EE+ +F E + V L H G +++F + A A
Sbjct: 1240 VDPQAFLDEEERADIAMDIREEMLQFAEK--VEVEIPLPPHPEAGAAFIRFPDRVSAEKA 1297
Query: 184 LHALQGRFYSGRPI 197
L +LQGRF+ GRP+
Sbjct: 1298 LSSLQGRFFDGRPV 1311
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
+ +D+ EEL ++G IE + + + + G VYV+F + AAAA A+Q R + RP+
Sbjct: 1150 EAIDDVTEELRQYGSIEEVALDERPNEPEAGTVYVRFTKAADAAAAADAMQHRRFEQRPV 1209
Query: 198 IVEFSPVTDFR 208
E V D R
Sbjct: 1210 NAELLSVFDMR 1220
>gi|356535254|ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 503
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
+ ED+ EE +K G ++ + +C+N H G V V+F++ + A + + GR++ GR I
Sbjct: 413 ELEEDVKEECTKLGPLDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQI 469
>gi|354475309|ref|XP_003499872.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cricetulus griseus]
Length = 714
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E +KFG+I+ L + D H G V FRE E+A + L GR++ GR I E
Sbjct: 216 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITAE 272
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 273 AWDGTTDYQ 281
>gi|291397536|ref|XP_002715130.1| PREDICTED: kinase interacting stathmin [Oryctolagus cuniculus]
Length = 419
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 133 QEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFY 192
+E +ED ED+ EE K+G + L V G V+V++ + AA L GR +
Sbjct: 337 EEEYEDIVEDVKEECQKYGPVVSLLVPKENPGR--GQVFVEYANAGDSKAAQKLLTGRMF 394
Query: 193 SGRPIIVEFSPVTDFREATCRQ 214
G+ ++ F P++ ++ Q
Sbjct: 395 DGKFVVATFYPLSAYKRGYLYQ 416
>gi|108706237|gb|ABF94032.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 566
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 24/155 (15%)
Query: 52 FAGRGLAMAEHL--ASIFGTEKDRVNC-PFYFKIGACRHGDRCSRLHNRPTISPT--LLL 106
AG GL + L AS+ G + P +G+ T P+ LLL
Sbjct: 419 IAGTGLNTSVGLPPASVLGAPPVAASVLPTVPGLGSVPGVSLPITTQAIETAPPSECLLL 478
Query: 107 SNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHM 166
NM+ P V+ DP + D +D+ EE SKFG+++ + V N +
Sbjct: 479 KNMFD------PSVET-----DP----DFDLDIKDDVQEECSKFGQVKHIFVDKNTS--- 520
Query: 167 IGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
G VY++F A +A AL GR+++G+ I F
Sbjct: 521 -GFVYLRFDSITAAMSAQKALHGRWFAGKMITATF 554
>gi|24659166|ref|NP_611769.2| large subunit 2 [Drosophila melanogaster]
gi|7291545|gb|AAF46969.1| large subunit 2 [Drosophila melanogaster]
gi|201066057|gb|ACH92438.1| FI08027p [Drosophila melanogaster]
Length = 449
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 142 DIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPII 198
DI +E +KFGE+ + + G V+VQF E + AL AL GR +SGR ++
Sbjct: 375 DIKQECAKFGEVRSIKIPRPIGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVM 434
Query: 199 VEF 201
+
Sbjct: 435 TSY 437
>gi|10798632|emb|CAC12816.1| hypothetical protein [Nicotiana tabacum]
Length = 86
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 145 EELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
EE SKFG ++ + VC+N H G V V+F++ A A+ GR+++GR I
Sbjct: 2 EECSKFGPVDLVKVCEN---HPQGVVLVKFKDRRDAHRCTEAMNGRWFAGRQI 51
>gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]
Length = 449
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 142 DIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPII 198
DI +E +KFGE+ + + G V+VQF E + AL AL GR +SGR ++
Sbjct: 375 DIKQECAKFGEVRSIKIPRPIGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVM 434
Query: 199 VEF 201
+
Sbjct: 435 TSY 437
>gi|148710217|gb|EDL42163.1| HIV TAT specific factor 1, isoform CRA_c [Mus musculus]
Length = 464
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FRE E+A + L GR++ GR I +
Sbjct: 193 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 249
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 250 AWDGTTDYQ 258
>gi|222624209|gb|EEE58341.1| hypothetical protein OsJ_09449 [Oryza sativa Japonica Group]
Length = 565
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Query: 52 FAGRGLAMAEHL--ASIFGTEKDRVNC-PFYFKIGACRHGDRCSRLHNRPTISPT--LLL 106
AG GL + L AS+ G + P +G+ T P+ LLL
Sbjct: 418 IAGTGLNTSVGLPPASVLGAPPVAASVLPTVPGLGSVPGVSLPITTQAIETAPPSECLLL 477
Query: 107 SNMYQRPDMITPGVDAQGQPIDPRKIQEHFE-DFYEDIFEELSKFGEIECLNVCDNLADH 165
NM+ P V+ DP F+ D +D+ EE SKFG+++ + V N +
Sbjct: 478 KNMFD------PSVET-----DP-----DFDLDIKDDVQEECSKFGQVKHIFVDKNTS-- 519
Query: 166 MIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
G VY++F A +A AL GR+++G+ I F
Sbjct: 520 --GFVYLRFDSITAAMSAQKALHGRWFAGKMITATF 553
>gi|218192112|gb|EEC74539.1| hypothetical protein OsI_10059 [Oryza sativa Indica Group]
Length = 567
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Query: 52 FAGRGLAMAEHL--ASIFGTEKDRVNC-PFYFKIGACRHGDRCSRLHNRPTISPT--LLL 106
AG GL + L AS+ G + P +G+ T P+ LLL
Sbjct: 420 IAGTGLNTSVGLPPASVLGAPPVAASVLPTVPGLGSVPGVSLPITTQAIETAPPSECLLL 479
Query: 107 SNMYQRPDMITPGVDAQGQPIDPRKIQEHFE-DFYEDIFEELSKFGEIECLNVCDNLADH 165
NM+ P V+ DP F+ D +D+ EE SKFG+++ + V N +
Sbjct: 480 KNMFD------PSVET-----DP-----DFDLDIKDDVQEECSKFGQVKHIFVDKNTS-- 521
Query: 166 MIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
G VY++F A +A AL GR+++G+ I F
Sbjct: 522 --GFVYLRFDSITAAMSAQKALHGRWFAGKMITATF 555
>gi|345306681|ref|XP_001514214.2| PREDICTED: HIV Tat-specific factor 1 homolog [Ornithorhynchus
anatinus]
Length = 439
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ + + D H G V ++E ++A + AL GR++ GR + VE
Sbjct: 277 EDLRTECEKFGQVKKVLLFDR---HPDGVASVSYKEADEADLCIQALNGRWFGGRQLSVE 333
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 334 AWDGVTDYQ 342
>gi|115446719|ref|NP_001047139.1| Os02g0557500 [Oryza sativa Japonica Group]
gi|46390906|dbj|BAD16421.1| U2 snRNP auxiliary factor-like protein [Oryza sativa Japonica
Group]
gi|113536670|dbj|BAF09053.1| Os02g0557500 [Oryza sativa Japonica Group]
Length = 401
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 187 LQGRFYSGRPIIVEFSPVTDFREATCRQFEEN---NCNRGGYCNFMH 230
+ GR+++G+ I EF VT ++ A C ++ + C+RG CNF+H
Sbjct: 1 MNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 47
>gi|291408295|ref|XP_002720372.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 1 [Oryctolagus
cuniculus]
Length = 770
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I+ L + D H G V FR+ E+A + L GR++ GR I E
Sbjct: 289 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAE 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|291408297|ref|XP_002720373.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 2 [Oryctolagus
cuniculus]
Length = 752
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I+ L + D H G V FR+ E+A + L GR++ GR I E
Sbjct: 289 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAE 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|255945691|ref|XP_002563613.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588348|emb|CAP86453.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 356
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
F+ ED+ + K+G +E + + G YV F E+A A+ G GR
Sbjct: 130 FDVTAEDLRKHFEKYGAVENALIVHDARGLSKGFGYVTFSTVEEATQAITQQHGGILEGR 189
Query: 196 PIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKL 242
++V+FS T R EN ++ Y + +L +DL++ +
Sbjct: 190 EVVVQFS------NTTYRAMAENKPSKTLYIGNLPYELTDQDLQDLI 230
>gi|340506650|gb|EGR32741.1| u2 snrnp auxilliary splicing factor, putative [Ichthyophthirius
multifiliis]
Length = 276
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVC-----DNLADHMIGNVYVQFREEEQAAAALHALQGR 190
+ + Y+D+ E K G IE + + + +G ++V+F+ +A A H L GR
Sbjct: 190 YNEIYQDVQSECEKIGPIEKVEIVRPCKMTGICPPSVGKIFVKFKYLLKAKRARHVLNGR 249
Query: 191 FYSGRPIIVEFSPVTDFREATCRQFEEN 218
Y+ R ++ F P F C++F N
Sbjct: 250 TYNKRTVVASFYPEEKF---DCKEFLVN 274
>gi|344247059|gb|EGW03163.1| HIV Tat-specific factor 1-like [Cricetulus griseus]
Length = 528
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E +KFG+I+ L + D H G V FRE E+A + L GR++ GR I E
Sbjct: 30 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITAE 86
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 87 AWDGTTDYQ 95
>gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus]
Length = 561
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FRE E+A + L GR++ GR I +
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 346
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 347 AWDGTTDYQ 355
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
F +D+F K+GEI + + D G +V+++ E++A A+ L GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDG 85
Query: 195 RPIIVEFS 202
R I+V+F+
Sbjct: 86 REIMVQFA 93
>gi|157818333|ref|NP_001101729.1| HIV-1 Tat specific factor 1 [Rattus norvegicus]
gi|149015808|gb|EDL75132.1| HIV TAT specific factor 1 (predicted) [Rattus norvegicus]
Length = 776
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FRE E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADNCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|449518089|ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 498
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 142 DIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D+ EE +KFG ++ + VC+N H G V ++F++ + A + + GR++ G+ I
Sbjct: 412 DVKEESTKFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQI 464
>gi|449457363|ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 496
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 142 DIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
D+ EE +KFG ++ + VC+N H G V ++F++ + A + + GR++ G+ I
Sbjct: 410 DVKEESTKFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQI 462
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 117 TPGVDAQGQPIDPRKIQEHFE-----------DFYEDIFEELSKFGEIECLNVCDNLADH 165
+P ++ GQP + ++ F+ D ED+ EE S++G+++ + V N A H
Sbjct: 289 SPAYESIGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGH 348
Query: 166 MIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
VY+QF E AA A A+ R+++ R I+ F
Sbjct: 349 ----VYLQFDSMEAAARAQRAMHMRWFARRSILAIF 380
>gi|334350282|ref|XP_001362589.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 444
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ + + D H G V ++E E+A + AL GR++ GR + VE
Sbjct: 288 EDLRTECEKFGQVKKVLLFDR---HPDGVASVSYKEPEEADLCIQALNGRWFGGRQLHVE 344
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 345 VWDGVTDYQ 353
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 168 GNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTD------------FREATCRQF 215
G YVQF EE AA+ L G GRP+ +++ + ++ C +F
Sbjct: 161 GFGYVQFHEEGPCEAAVK-LDGMVVMGRPMSIDYGARDEGYAQAREELQKKLKKGVCHKF 219
Query: 216 EENNCNRGGYCNFMHV 231
++ C RG C F HV
Sbjct: 220 QQGQCTRGDACKFAHV 235
>gi|124809808|ref|XP_001348687.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497585|gb|AAN37126.1|AE014824_45 RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 511
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 148 SKFGEIECLNVC--DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFS 202
SKFG + +N+ NL D + +Y ++ ++QA AL+ +GR ++GR + F+
Sbjct: 443 SKFGNLLNINIVVDKNLLDALAVKIYCEYESKDQAQNALNTFKGRTFAGRKVQASFA 499
>gi|301105717|ref|XP_002901942.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099280|gb|EEY57332.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 520
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 129 PRKIQ-EHFE-DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHA 186
P +I+ E +E + EDI +E SK G++ + + A H+ G V ++F AA +
Sbjct: 342 PAEIEDEAYEKELQEDIHDECSKIGDVTKITL---FAKHVDGVVVIKFASSGSAARCVDV 398
Query: 187 LQGRFYSGRPIIVEFSPVTDF 207
+ GRF++GR + F TD+
Sbjct: 399 MSGRFFAGRKLECGFWDGTDY 419
>gi|148710216|gb|EDL42162.1| HIV TAT specific factor 1, isoform CRA_b [Mus musculus]
Length = 793
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FRE E+A + L GR++ GR I +
Sbjct: 326 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 382
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 383 AWDGTTDYQ 391
>gi|71996481|ref|NP_497326.2| Protein UAF-1, isoform b [Caenorhabditis elegans]
gi|351018335|emb|CCD62279.1| Protein UAF-1, isoform b [Caenorhabditis elegans]
Length = 143
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAAL 184
D K + +E+ ED+ +E SK+G + L + DH +G V+V+F A
Sbjct: 56 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 115
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
AL GR ++ R ++ + V + RQF
Sbjct: 116 AALTGRKFANRTVVTSYYDVDKYHN---RQF 143
>gi|23956212|ref|NP_082518.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|321267528|ref|NP_083647.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|81913100|sp|Q8BGC0.1|HTSF1_MOUSE RecName: Full=HIV Tat-specific factor 1 homolog
gi|22902415|gb|AAH37711.1| HIV TAT specific factor 1 [Mus musculus]
gi|26340228|dbj|BAC33777.1| unnamed protein product [Mus musculus]
gi|148710215|gb|EDL42161.1| HIV TAT specific factor 1, isoform CRA_a [Mus musculus]
Length = 757
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FRE E+A + L GR++ GR I +
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 346
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 347 AWDGTTDYQ 355
>gi|71996490|ref|NP_001022970.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
gi|351018337|emb|CCD62281.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
Length = 471
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHM---IGNVYVQFREEEQAAAAL 184
D K + +E+ ED+ +E SK+G + L + DH +G V+V+F A
Sbjct: 384 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 443
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
AL GR ++ R ++ + V + RQF
Sbjct: 444 AALTGRKFANRTVVTSYYDVDKYHN---RQF 471
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 141 EDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
+D+F K+GEI + + D G +V+++ E++A A+ L GR GR I+V
Sbjct: 31 DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMV 90
Query: 200 EFS 202
+F+
Sbjct: 91 QFA 93
>gi|71996475|ref|NP_001022967.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
gi|6226906|sp|P90978.2|U2AF2_CAEEL RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|3334906|gb|AAC26982.1| splicing factor U2AF65 [Caenorhabditis elegans]
gi|351018334|emb|CCD62278.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
Length = 496
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAAL 184
D K + +E+ ED+ +E SK+G + L + DH +G V+V+F A
Sbjct: 409 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 468
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
AL GR ++ R ++ + V + RQF
Sbjct: 469 AALTGRKFANRTVVTSYYDVDKYHN---RQF 496
>gi|71996485|ref|NP_001022969.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
gi|351018336|emb|CCD62280.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
Length = 474
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAAL 184
D K + +E+ ED+ +E SK+G + L + DH +G V+V+F A
Sbjct: 387 DELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQ 446
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
AL GR ++ R ++ + V + RQF
Sbjct: 447 AALTGRKFANRTVVTSYYDVDKYHN---RQF 474
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 21/102 (20%)
Query: 98 PTISPT--LLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIEC 155
P +P+ LLL NM+ P D D ED+ EE SK+G ++
Sbjct: 449 PVGNPSECLLLKNMFDPNTETEPDFDL---------------DIKEDVEEECSKYGRVKH 493
Query: 156 LNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
+ V A G VY+QF E A+AA A+ R+++GR I
Sbjct: 494 IYVDKRSA----GFVYLQFETVEAASAAQRAMHTRWFAGRMI 531
>gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae]
Length = 488
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAALHALQGR 190
E +E+ ED+ EE SK+G + L + DH +G V+V+F A AL GR
Sbjct: 406 EDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAALTGR 465
Query: 191 FYSGRPIIVEFSPVTDFREATCRQF 215
++ R ++ + V + RQF
Sbjct: 466 KFANRTVVTSYYDVDKYHN---RQF 487
>gi|268575804|ref|XP_002642882.1| C. briggsae CBR-UAF-1 protein [Caenorhabditis briggsae]
gi|60415989|sp|P90727.2|U2AF2_CAEBR RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
Length = 488
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAALHALQGR 190
E +E+ ED+ EE SK+G + L + DH +G V+V+F A AL GR
Sbjct: 406 EDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAALTGR 465
Query: 191 FYSGRPIIVEFSPVTDFREATCRQF 215
++ R ++ + V + RQF
Sbjct: 466 KFANRTVVTSYYDVDKYHN---RQF 487
>gi|189308116|gb|ACD86942.1| UAF-1 [Caenorhabditis brenneri]
Length = 108
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAAL 184
D K E +E+ ED+ EE SK+G + L + +H +G V+V+F A
Sbjct: 21 DELKSDEDYEEILEDVREECSKYGIVRSLEIPRPYDEHPVPGVGKVFVEFASTSDCQRAQ 80
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
AL GR ++ R ++ + V + RQF
Sbjct: 81 AALTGRKFANRTVVTSYYDVDKYHN---RQF 108
>gi|327286675|ref|XP_003228055.1| PREDICTED: HIV Tat-specific factor 1-like [Anolis carolinensis]
Length = 533
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E KFG+++ + + D H G V F+E E+A AL GR++ GR + VE
Sbjct: 375 EDLRSECEKFGQVKKVIIFDR---HPDGVASVSFKEAEEADVCKQALDGRWFGGRQLSVE 431
Query: 201 -FSPVTDFR 208
+ VTD++
Sbjct: 432 TWDGVTDYQ 440
>gi|193629757|ref|XP_001950852.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Acyrthosiphon
pisum]
Length = 446
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 114 DMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNV---CDNLADHMIGNV 170
+M+TP D K +E +ED EDI EE +K+G + L + + + G V
Sbjct: 354 NMVTP---------DELKDEEEYEDILEDIREECNKYGVVRSLEIPRPIEGIDVPGCGKV 404
Query: 171 YVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+++F A AL GR ++ R ++ F
Sbjct: 405 FIEFNAIPDCQKAQQALAGRKFNNRVVVTSF 435
>gi|291243989|ref|XP_002741882.1| PREDICTED: HIV-1 Tat specific factor 1-like [Saccoglossus
kowalevskii]
Length = 370
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHAL 187
DP I E +D+ E KFGE++ + + D H G V+F+E E+A + AL
Sbjct: 267 DPMAINE----IIDDLKAECGKFGEVKKVLIFDR---HPDGVASVKFKEPEEADVCIAAL 319
Query: 188 QGRFYSGRPIIV 199
GR+++ R II
Sbjct: 320 NGRWFAKRQIIA 331
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSG 194
F +D+F K+GEI + + D G +V+++ E++A A+ L GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDG 85
Query: 195 RPIIVEFS 202
R I+V+F+
Sbjct: 86 REIMVQFA 93
>gi|167515386|ref|XP_001742034.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
gi|163778658|gb|EDQ92272.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
Length = 431
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLA--DHMIG--NVYVQFREEEQAAAALHALQG 189
E ++D EDI EE KFG I L + +A + IG +++++ ++A A AL G
Sbjct: 349 EEYKDIMEDIREECGKFGNITDLKIPRPVAEGEQPIGLEKIFIRYATVDEARNAQRALSG 408
Query: 190 RFYSGRPIIVEFSPVTDF 207
R ++ R ++V + V F
Sbjct: 409 RRFANRTVVVSYLDVAKF 426
>gi|86438143|gb|AAI12691.1| HTATSF1 protein [Bos taurus]
Length = 524
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 141 EDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
+D+F K+GEI + + D G +V+++ E++A A+ L GR GR I+V
Sbjct: 30 DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMV 89
Query: 200 EFS 202
+F+
Sbjct: 90 QFA 92
>gi|224094725|ref|XP_002310209.1| predicted protein [Populus trichocarpa]
gi|222853112|gb|EEE90659.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 109 MYQRPDMITPGV-DAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVC------DN 161
M Q P ++T V Q +D K + +ED EDI E KFG++ +NV D
Sbjct: 284 MLQPPPVVTKVVCLTQVVTVDELKDDDEYEDILEDIRMEAGKFGQL--VNVVIPRPRPDG 341
Query: 162 LADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEFSPVTDFREA 210
+G V++++ + E ++ A + GR + G ++ F P F +
Sbjct: 342 ENAPGVGKVFLEYADTEGSSKARAGMNGRKFGGNHVVAVFFPENKFSQG 390
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 138 DFYE-DIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
DF E D+ +++GE+ +N+ D G ++ + ++ A+ L G SGR
Sbjct: 46 DFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVSGR 105
Query: 196 PIIVEF------------SPVTDFREA--TCRQFEENNCNRGGYCNFMH 230
I V+ REA CR F+ C RG C F H
Sbjct: 106 IIRVDHVDKYKKMEEEDEEEAKQKREARGVCRAFQRGECTRGAGCKFSH 154
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 141 EDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
+D+F K+GEI + + D G +V+++ E++A A+ L GR GR I+V
Sbjct: 31 DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMV 90
Query: 200 EFS 202
+F+
Sbjct: 91 QFA 93
>gi|341891946|gb|EGT47881.1| hypothetical protein CAEBREN_25972 [Caenorhabditis brenneri]
Length = 491
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADH---MIGNVYVQFREEEQAAAAL 184
D K E +E+ ED+ EE SK+G + L + +H +G V+V+F A
Sbjct: 404 DELKSDEDYEEILEDVREECSKYGIVRSLEIPRPYDEHPVPGVGKVFVEFASTSDCQRAQ 463
Query: 185 HALQGRFYSGRPIIVEFSPVTDFREATCRQF 215
AL GR ++ R ++ + V + RQF
Sbjct: 464 AALTGRKFANRTVVTSYYDVDKYHN---RQF 491
>gi|348518982|ref|XP_003447010.1| PREDICTED: HIV Tat-specific factor 1 homolog [Oreochromis
niloticus]
Length = 452
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 136 FEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGR 195
++ ED+ E KFGE++ + + D H G V F+E EQA A + + GR++ GR
Sbjct: 298 LNEYREDLRSECEKFGEVKKVILFDR---HPDGVASVAFKEPEQADACILSFNGRWFGGR 354
Query: 196 PIIVE-FSPVTDFR 208
+ + + TD++
Sbjct: 355 QLSAQLWDGTTDYQ 368
>gi|348557907|ref|XP_003464760.1| PREDICTED: LOW QUALITY PROTEIN: HIV Tat-specific factor 1 homolog
[Cavia porcellus]
Length = 752
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E +KFG+I+ L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFRDAEEADHCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|351695595|gb|EHA98513.1| HIV Tat-specific factor 1-like protein [Heterocephalus glaber]
Length = 728
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
+D+ E SKFG+I+ L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 286 DDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADHCIQTLDGRWFGGRQITAQ 342
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 343 PWDGTTDYQ 351
>gi|345807273|ref|XP_538183.3| PREDICTED: HIV Tat-specific factor 1 homolog [Canis lupus
familiaris]
Length = 768
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|444705508|gb|ELW46932.1| HIV Tat-specific factor 1 like protein [Tupaia chinensis]
Length = 623
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I+ L + D H G V FR+ ++A + L GR++ GR I +
Sbjct: 168 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPDEADLCIQTLDGRWFGGRQITAQ 224
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 225 AWDGTTDYQ 233
>gi|417404468|gb|JAA48986.1| Putative transcription elongation factor tat-sf1 [Desmodus
rotundus]
Length = 766
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I+ L + D H G V FR E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRNPEEADHCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|301769097|ref|XP_002919964.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ailuropoda
melanoleuca]
Length = 767
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGATDYQ 354
>gi|330340363|ref|NP_001193343.1| HIV Tat-specific factor 1 [Bos taurus]
Length = 773
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|431891353|gb|ELK02229.1| HIV Tat-specific factor 1 like protein [Pteropus alecto]
Length = 786
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 288 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 344
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 345 VWDGTTDYQ 353
>gi|197102050|ref|NP_001125576.1| HIV Tat-specific factor 1 homolog [Pongo abelii]
gi|75070769|sp|Q5RB63.1|HTSF1_PONAB RecName: Full=HIV Tat-specific factor 1 homolog
gi|55728510|emb|CAH90997.1| hypothetical protein [Pongo abelii]
Length = 754
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|332246954|ref|XP_003272619.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Nomascus
leucogenys]
Length = 754
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|194387946|dbj|BAG61386.1| unnamed protein product [Homo sapiens]
Length = 721
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|403300078|ref|XP_003940786.1| PREDICTED: HIV Tat-specific factor 1 homolog [Saimiri boliviensis
boliviensis]
Length = 743
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|296236526|ref|XP_002763352.1| PREDICTED: HIV Tat-specific factor 1 homolog [Callithrix jacchus]
Length = 744
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 346
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 347 AWDGTTDYQ 355
>gi|21361437|ref|NP_055315.2| HIV Tat-specific factor 1 [Homo sapiens]
gi|253970456|ref|NP_001156752.1| HIV Tat-specific factor 1 [Homo sapiens]
gi|74754346|sp|O43719.1|HTSF1_HUMAN RecName: Full=HIV Tat-specific factor 1; Short=Tat-SF1
gi|14602772|gb|AAH09896.1| HIV-1 Tat specific factor 1 [Homo sapiens]
gi|30582611|gb|AAP35532.1| HIV TAT specific factor 1 [Homo sapiens]
gi|61362248|gb|AAX42186.1| HIV TAT specific factor 1 [synthetic construct]
gi|119608874|gb|EAW88468.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|119608875|gb|EAW88469.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|157929022|gb|ABW03796.1| HIV-1 Tat specific factor 1 [synthetic construct]
Length = 755
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|62088186|dbj|BAD92540.1| HIV TAT specific factor 1 variant [Homo sapiens]
Length = 758
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 292 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 348
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 349 AWDGTTDYQ 357
>gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct]
gi|60653905|gb|AAX29645.1| HIV TAT specific factor 1 [synthetic construct]
gi|60653907|gb|AAX29646.1| HIV TAT specific factor 1 [synthetic construct]
Length = 756
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|426397566|ref|XP_004064985.1| PREDICTED: HIV Tat-specific factor 1 [Gorilla gorilla gorilla]
Length = 755
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|397482309|ref|XP_003812372.1| PREDICTED: HIV Tat-specific factor 1 [Pan paniscus]
gi|410211494|gb|JAA02966.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410261782|gb|JAA18857.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410304122|gb|JAA30661.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410333195|gb|JAA35544.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
Length = 755
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|402911564|ref|XP_003918392.1| PREDICTED: HIV Tat-specific factor 1 homolog [Papio anubis]
Length = 645
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 184 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 240
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 241 AWDGTTDYQ 249
>gi|355757742|gb|EHH61267.1| hypothetical protein EGM_19235 [Macaca fascicularis]
Length = 754
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|297304889|ref|XP_001082302.2| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Macaca
mulatta]
gi|355705198|gb|EHH31123.1| hypothetical protein EGK_20983 [Macaca mulatta]
Length = 754
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|47221801|emb|CAG08855.1| unnamed protein product [Tetraodon nigroviridis]
Length = 383
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 128 DPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHAL 187
DP + E + ED+ E KFG ++ + + D H G V F+E E+A A +
Sbjct: 290 DPLVLNE----YREDLRVECEKFGVVKKVILFDR---HPDGVASVAFKEPEEADACFQSF 342
Query: 188 QGRFYSGRPIIVEF 201
GR++ GR + VEF
Sbjct: 343 NGRWFGGRQLSVEF 356
>gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens]
Length = 754
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 141 EDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
+D+F K+GEI + + D G +V+++ E++A A+ L GR GR I+V
Sbjct: 31 DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMV 90
Query: 200 EFS 202
+F+
Sbjct: 91 QFA 93
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 134 EHFEDFYEDIFEELSKFGEIECLNVCDNLADHM----IGNVYVQFREEEQAAAALHALQG 189
E FE+ Y+D+ EE SK+G ++ + + + M +G ++V+F + A A AL G
Sbjct: 249 EEFEEIYDDVREECSKYGRVKSMEIPRPMEGLMEPPGVGKIFVEFSSIDDAKKAAAALGG 308
Query: 190 RFYSGRPIIVEFSP 203
R ++ R ++ + P
Sbjct: 309 RKFANRVVVTSYYP 322
>gi|302832155|ref|XP_002947642.1| hypothetical protein VOLCADRAFT_87981 [Volvox carteri f.
nagariensis]
gi|300266990|gb|EFJ51175.1| hypothetical protein VOLCADRAFT_87981 [Volvox carteri f.
nagariensis]
Length = 441
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 143 IFEELSKFGEIECLNVCDNLADHMIGN----VYVQFREEEQAAAALHALQGRFYSGRPII 198
+ +EL+K+G++ + + + + ++VQF +E A A LQGRF++GR +
Sbjct: 360 VGQELTKYGKVLDVLIFEVTTPGYVEEEAVRIFVQFERQESATKAAVDLQGRFFAGRSVR 419
Query: 199 VEFSP 203
V F P
Sbjct: 420 VSFFP 424
>gi|444722708|gb|ELW63388.1| HIV Tat-specific factor 1 [Tupaia chinensis]
Length = 449
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 126 PIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALH 185
P+D D +D+ E SKFG+I+ L + D H G V FR+ ++A +
Sbjct: 274 PMDFEDDPLLLNDIRKDLQVECSKFGKIKKLLLFDR---HPDGVASVSFRDPQEADYCIR 330
Query: 186 ALQGRFYSGRPIIVE-FSPVTDFR 208
L GR++ GR I + + TD++
Sbjct: 331 TLDGRWFGGRQITAQVWDGTTDYQ 354
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
+D+ EE +K G + + V D + + GNVYV+ A +++AL GR++SG+ I
Sbjct: 431 DDVIEECAKNGGVLHIFV-DKASPN--GNVYVKCPSVAAAFKSVNALHGRWFSGKVITAN 487
Query: 201 FSPVTDFRE 209
+ PV + +
Sbjct: 488 YVPVASYSQ 496
>gi|410989518|ref|XP_004001008.1| PREDICTED: HIV Tat-specific factor 1 homolog [Felis catus]
Length = 780
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E +KFG+I L + D H G V FR+ E+A + L GR++ GR I +
Sbjct: 303 EDLRVECAKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 359
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 360 AWDGTTDYQ 368
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
+D+ EE +K G + + V D + + GNVYV+ A +++AL GR++SG+ I
Sbjct: 545 DDVIEECAKNGGVLHIFV-DKASPN--GNVYVKCPSVAAAFKSVNALHGRWFSGKVITAN 601
Query: 201 FSPVTDFRE 209
+ PV + +
Sbjct: 602 YVPVASYSQ 610
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 116 ITPGVDAQGQPIDPRKIQEHFE-----------DFYEDIFEELSKFGEIECLNVCDNLAD 164
+T VDA GQP + ++ F+ D +D+ EE SKFG ++ + V N A
Sbjct: 257 LTGAVDAIGQPSEYLLLKNMFDPSTESDPDFDMDIKDDVQEECSKFGVVKHIFVDKNSAG 316
Query: 165 HMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
H VY+ F A AA AL GR+++G+ I +
Sbjct: 317 H----VYLCFDSIAAAMAAQRALHGRWFAGKMITATY 349
>gi|426257498|ref|XP_004022363.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ovis aries]
Length = 774
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V F++ E+A + L GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFKDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|403264917|ref|XP_003924710.1| PREDICTED: HIV Tat-specific factor 1 homolog [Saimiri boliviensis
boliviensis]
Length = 792
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 141 EDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
ED+ E SKFG+I L + D H G V F++ E+A + L GR++ GR I +
Sbjct: 337 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFQDPEEADYCIQTLDGRWFGGRQITAQ 393
Query: 201 -FSPVTDFR 208
+ TD++
Sbjct: 394 AWDGTTDYQ 402
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 141 EDIFEELSKFGEIECLNVC-DNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIV 199
+D+F K+GE+ + + D G +V+++ E++A A+ L GR GR ++V
Sbjct: 30 DDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREMMV 89
Query: 200 EFS 202
+F+
Sbjct: 90 QFA 92
>gi|195346998|ref|XP_002040041.1| GM15574 [Drosophila sechellia]
gi|194135390|gb|EDW56906.1| GM15574 [Drosophila sechellia]
Length = 445
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 142 DIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPII 198
DI +E +KFGE+ + + G V+VQF E + AL AL GR +S R ++
Sbjct: 371 DIKQECAKFGEVRSIKIPRPIGPFPKRGCGKVFVQFESVEDSQKALKALSGRKFSDRIVM 430
Query: 199 VEF 201
+
Sbjct: 431 TSY 433
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 142 DIFEELSKFGE-IECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
D+ K+GE ++C + H G +V+FR+EE A A+ + GR GR I V+
Sbjct: 42 DLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAMEEMDGREVDGRSITVQ 101
Query: 201 FS 202
F+
Sbjct: 102 FA 103
>gi|195585954|ref|XP_002082743.1| GD25073 [Drosophila simulans]
gi|194194752|gb|EDX08328.1| GD25073 [Drosophila simulans]
Length = 445
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 142 DIFEELSKFGEIECLNV---CDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPII 198
DI +E +KFGE+ + + G V+VQF E + AL AL GR +S R ++
Sbjct: 371 DIKQECAKFGEVRSIKIPRPIGPFPKRGCGKVFVQFESVEDSQKALKALSGRKFSDRIVM 430
Query: 199 VEF 201
+
Sbjct: 431 TSY 433
>gi|440907708|gb|ELR57819.1| HIV Tat-specific factor 1 [Bos grunniens mutus]
Length = 766
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 91 CSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKF 150
SR+H+ + ++ NM+ VD + P+ +I+E D+ E SKF
Sbjct: 257 SSRMHHERVV----IIKNMFHP-------VDFEDDPLVLNEIRE-------DLRVECSKF 298
Query: 151 GEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVE 200
G+I L + D H G V FR E+A + L GR++ GR I +
Sbjct: 299 GQIRKLLLFDR---HPDGVASVSFRSPEEADYCIQTLNGRWFGGRQITAQ 345
>gi|194756144|ref|XP_001960339.1| GF13310 [Drosophila ananassae]
gi|190621637|gb|EDV37161.1| GF13310 [Drosophila ananassae]
Length = 434
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 142 DIFEELSKFGEIECLNVCDNLADH-----MIGNVYVQFREEEQAAAALHALQGRFYSGRP 196
DI +E +K+G++ L + + G V+VQF + A+ AL GR +SGR
Sbjct: 358 DIQQECAKYGDVRSLKIPRPIPKGDSPKRGCGKVFVQFESVDDCQKAMRALSGRKFSGRI 417
Query: 197 IIVEFS 202
++ FS
Sbjct: 418 VMTSFS 423
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 26/109 (23%)
Query: 98 PTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHF-----EDFYEDIFEELSKFGE 152
P +P LL+ NM+ DP QE E+ +D+ +E SK+G
Sbjct: 287 PIPTPCLLIKNMF-----------------DPAAAQEEMGQDWAEEIAQDVQDECSKYGA 329
Query: 153 IECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPIIVEF 201
+ ++V D + G VY++ E A+AA A+ GR+++GR + VEF
Sbjct: 330 VVHIHV-DKSSK---GCVYLKCGSVEAASAAQAAMNGRWFAGRQLAVEF 374
>gi|256091162|ref|XP_002581498.1| hypothetical protein [Schistosoma mansoni]
Length = 60
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 220 CNRGGYCNFMHVKLIGRDLRNKLF 243
C RGG+CNFMH+K I R+L KL+
Sbjct: 2 CTRGGFCNFMHLKPISRELCRKLY 25
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,219,314,464
Number of Sequences: 23463169
Number of extensions: 223265025
Number of successful extensions: 822975
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 5973
Number of HSP's that attempted gapping in prelim test: 742362
Number of HSP's gapped (non-prelim): 59924
length of query: 324
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 182
effective length of database: 9,027,425,369
effective search space: 1642991417158
effective search space used: 1642991417158
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)