BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040116
(298 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26360|ATPG3_IPOBA ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas
GN=ATPC PE=1 SV=2
Length = 326
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/326 (78%), Positives = 278/326 (85%), Gaps = 28/326 (8%)
Query: 1 MAMAALRREGRRFAT-PLISPRPIAAIRSPFLS--EEDAPLGVRSISTQIVRNRMKSVKN 57
MAMAALRREGRR A P SP P+ A+RS +S EE GVRSISTQ+VRNRMKSVKN
Sbjct: 1 MAMAALRREGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVRNRMKSVKN 60
Query: 58 IQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLC 117
IQKITKAMKMVAASKLRAIQ +AENSRGLWQPFTALLGDTP+VD KKNVI+TISSDKGLC
Sbjct: 61 IQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLC 120
Query: 118 GGINSTAVKISKSLHKLNS-------------------------DIELIITELQKNPLNY 152
GGINST+VK S+++HKLNS DIELIITELQKNPLNY
Sbjct: 121 GGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNY 180
Query: 153 TQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS 212
TQVSV+ADDILKNVEFDALRI+++KF SVVSF+PTM+TVLSPE+VERE+ESGGKLG+LDS
Sbjct: 181 TQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVERESESGGKLGDLDS 240
Query: 213 YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTL 272
YEIEG E+K E+LQNL EFQFS V+FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTL
Sbjct: 241 YEIEGAESKSEVLQNLTEFQFSSVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTL 300
Query: 273 TYNRTRQASITTELIEIISGASALEG 298
TYNRTRQASITTELIEIISGASALEG
Sbjct: 301 TYNRTRQASITTELIEIISGASALEG 326
>sp|Q96250|ATPG3_ARATH ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana
GN=ATPC PE=1 SV=1
Length = 325
Score = 503 bits (1294), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/324 (77%), Positives = 276/324 (85%), Gaps = 27/324 (8%)
Query: 1 MAMAALRREGRRFATPLISPRPIAAIRSPFLS-EEDAPLGVRSISTQIVRNRMKSVKNIQ 59
MAMA RREGRR P I+ RPIAAIRSP S +E+ LGVRSISTQ+VRNRMKSVKNIQ
Sbjct: 1 MAMAVFRREGRRL-LPSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQ 59
Query: 60 KITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGG 119
KITKAMKMVAASKLRA+Q +AENSRGLWQPFTALLGD P++D KK+V+VT+SSDKGLCGG
Sbjct: 60 KITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGDNPSIDVKKSVVVTLSSDKGLCGG 119
Query: 120 INSTAVKISKSLHKLNS-------------------------DIELIITELQKNPLNYTQ 154
INST VK+S++L+KLN+ DI L +TEL KNPLNY Q
Sbjct: 120 INSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQ 179
Query: 155 VSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYE 214
VSVLADDILKNVEFDALRI+Y+KFHSVV+FLPT++TVLSPE++E+E+E GGKLGELDSYE
Sbjct: 180 VSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYE 239
Query: 215 IEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTY 274
IEGGETKGEILQNLAEFQFSCVMFNAVLENACSE GARMSAMDSSSRNAGEMLDRLTLTY
Sbjct: 240 IEGGETKGEILQNLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTY 299
Query: 275 NRTRQASITTELIEIISGASALEG 298
NRTRQASITTELIEIISGASALE
Sbjct: 300 NRTRQASITTELIEIISGASALEA 323
>sp|B7KUA3|ATPG_METC4 ATP synthase gamma chain OS=Methylobacterium chloromethanicum
(strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1
Length = 296
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 161/296 (54%), Gaps = 45/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + +LG+
Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNLIG 62
Query: 97 --------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS-LHKLNSDIEL--IITEL 145
+ T + +++V + D+GL G NS+ ++++ ++L +D + IIT
Sbjct: 63 GVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIG 122
Query: 146 QKN----------------------PLNYTQVSVLADDILKNV---EFDALRIIYSKFHS 180
+K P++Y + +ADDIL EFD + YS+F S
Sbjct: 123 KKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRS 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
V+S +PT ++ EL E S G + E E E IL+ L + +F A
Sbjct: 183 VISQIPTAQKLIPAELPTAEGASATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRA 240
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct: 241 LLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296
>sp|B1ZEE8|ATPG_METPB ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC
BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1
Length = 295
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 46/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + ++L +
Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAEKMASVLANLAGNLIG 62
Query: 97 --------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS------------------ 130
+ T + +++V + D+GL G NS+ ++++
Sbjct: 63 GVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMAEGKTVKIMTVG 122
Query: 131 ------LHKLNSDIELIITELQKN-PLNYTQVSVLADDILKNVE---FDALRIIYSKFHS 180
L + D + +++ N P++Y + +ADDIL E FD + YS+F S
Sbjct: 123 KKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRS 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
V+S +PT ++ EL + + + G G + E E E IL+ L + +F A
Sbjct: 183 VISQIPTAQKIIPAELPQTDGAAKGA-GSDAAMEFEPSEET--ILETLLPKNLTVQVFRA 239
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct: 240 LLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 295
>sp|P05631|ATPG_BOVIN ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1
PE=1 SV=3
Length = 298
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 171/292 (58%), Gaps = 49/292 (16%)
Query: 40 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFT 91
VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ +V S L++
Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKAD 81
Query: 92 ALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS--------------------- 130
TP D KK++I+ +SSD+GLCG I+S+ K KS
Sbjct: 82 I---KTPE-DKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKI 137
Query: 131 ---LHKLNSDIELI-ITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFL 185
LH+ +SD L+ E+ + P + SV+A ++L + EFD II+++F SV+S+
Sbjct: 138 RSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYK 197
Query: 186 PTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENA 245
+ S + + AES ++D+ ++L+N E+ + +++ ++ E+
Sbjct: 198 TEEKPIFSLDTIS-SAESMSIYDDIDA----------DVLRNYQEYSLANIIYYSLKEST 246
Query: 246 CSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 297
SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>sp|A9W2R2|ATPG_METEP ATP synthase gamma chain OS=Methylobacterium extorquens (strain
PA1) GN=atpG PE=3 SV=1
Length = 296
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 161/296 (54%), Gaps = 45/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + +LG+
Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNLIG 62
Query: 97 --------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS-LHKLNSDIEL--IITEL 145
T T + +++V + D+GL G NS+ ++++ ++L +D + IIT
Sbjct: 63 GVGAPRLLTGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIG 122
Query: 146 QKN----------------------PLNYTQVSVLADDILKNV---EFDALRIIYSKFHS 180
+K P++Y + +ADDIL EFD + YS+F S
Sbjct: 123 KKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRS 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
V+S +PT ++ EL E + G + E E E IL+ L + +F A
Sbjct: 183 VISQIPTAQKLIPAELPTAEGAAATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRA 240
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct: 241 LLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296
>sp|Q4FP37|ATPG_PELUB ATP synthase gamma chain OS=Pelagibacter ubique (strain HTCC1062)
GN=atpG PE=3 SV=1
Length = 291
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 160/292 (54%), Gaps = 50/292 (17%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD----------- 96
++ R+ SVK+ QKITKAMKMVAA+KLR Q AE R + ++ +
Sbjct: 7 LKKRIASVKSTQKITKAMKMVAAAKLRRAQENAEKGRPYSEKMNNIILNLSSGISDKENA 66
Query: 97 ----TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSD----IELI------- 141
+ T + K ++ + ++SD+GLCGG N+ +K +K+ + SD +++I
Sbjct: 67 PKLLSGTGEDKVHLCIVLTSDRGLCGGFNTNIIKKAKTYFQKISDEGKTLKIITVGSKGY 126
Query: 142 --------------ITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSF 184
I+ +NY + I++N EFD I Y+KF +V++
Sbjct: 127 DQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNKFKNVITQ 186
Query: 185 LPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLEN 244
+P ++ + E E S D+YE E E EIL NL S +F A+LEN
Sbjct: 187 IPQEQQIIPLKTSEAEENSSE-----DNYEFEPDE--DEILSNLLPKNISTQIFKAMLEN 239
Query: 245 ACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+ SEQG+RMSAMD+++RNAGEM+D+LT+ YNR+RQA+IT ELIEIISGA +L
Sbjct: 240 SASEQGSRMSAMDNATRNAGEMVDKLTIEYNRSRQAAITKELIEIISGAESL 291
>sp|B0UE40|ATPG_METS4 ATP synthase gamma chain OS=Methylobacterium sp. (strain 4-46)
GN=atpG PE=3 SV=1
Length = 292
Score = 164 bits (415), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 162/299 (54%), Gaps = 55/299 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-----TP 98
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG+ TP
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTP 62
Query: 99 TVDAKK----------NVIVTISSDKGLCGGINSTAVKISKS----------------LH 132
+ + ++++ ++++GLCG NS+ ++++ +
Sbjct: 63 GAETPRLLSGTGADRVHLLLVCTAERGLCGAFNSSIARLARDHARRLTAEGRTVKIICVG 122
Query: 133 KLNSDI----------ELIITELQK-NPLNYTQVSVLADDILKNVE---FDALRIIYSKF 178
K DI ELI EL+ L + +A ++L E FD + YS+F
Sbjct: 123 KKGYDILRREFRDQIVELI--ELRGVRQLGFDNAETIAQNLLGRFEAGEFDIATLFYSRF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVM 237
SV+ +PT ++ E+ G+ + D+ YE E E GEIL L + +
Sbjct: 181 RSVIVQIPTAQQIIPAEI-----PPAGEAAQTDAAYEYEPDE--GEILAALLPKNLTVQI 233
Query: 238 FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LENA SEQGARMSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct: 234 LRALLENAASEQGARMSAMDNATRNAGEMIKKQTLVYNRTRQAQITKELIEIISGAEAL 292
>sp|A8LJR5|ATPG_DINSH ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12)
GN=atpG PE=3 SV=1
Length = 290
Score = 164 bits (415), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 168/294 (57%), Gaps = 55/294 (18%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP-- 98
++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A+L GD+
Sbjct: 7 LKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASVGDSDSG 66
Query: 99 ------TVDAKKNVIVTISSDKGLCGGINSTAVKIS---------------------KSL 131
T + +++V +++++GLCGG NS+ K++ K
Sbjct: 67 PRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILTVGKKGR 126
Query: 132 HKLNSDI------ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVV 182
+L D+ + ++E+++ ++Y + +A D+L EFD I +++F SV+
Sbjct: 127 EQLKRDLSKHFIGHVDLSEVKR--VSYDNAADIAADVLGRFDAGEFDVATIFFNRFQSVI 184
Query: 183 SFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVL 242
S +PT ++ P E +A++ L Y+ E E IL +L + +F A+L
Sbjct: 185 SQIPTAQQII-PASFEGDADADATL-----YDYEPSEEA--ILADLLPRGVATQIFAALL 236
Query: 243 ENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
EN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA IT ELIEIISGA AL
Sbjct: 237 ENGASEQGARMSAMDNATRNAGDMIERLTIEYNRSRQAVITNELIEIISGAEAL 290
>sp|Q162S8|ATPG_ROSDO ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=atpG PE=3 SV=1
Length = 291
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 166/298 (55%), Gaps = 54/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A++
Sbjct: 3 SLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASVGG 62
Query: 97 --------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS----LHKLNSDIELI--- 141
+ T K +++ ++S++GLCGG N+ K++++ L D++++
Sbjct: 63 SDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILTVG 122
Query: 142 --------------------ITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKF 178
+TE+++ ++Y +A D+L EFD I Y+KF
Sbjct: 123 KKGRDQLKRDLGSLFIGHVDLTEIKR--VSYVDAQGIAKDVLNRFDVGEFDVATIFYAKF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMF 238
+VVS +PT ++ + ++E E L ++ E E IL +L + +F
Sbjct: 181 VNVVSQIPTAQQIIPAKFEQQEGEEASTL-----FDYEPDEEA--ILADLLPRGVATQIF 233
Query: 239 NAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+A+LEN SEQGARMSAMD+++RNAGEM++ LT+ +NR+RQA IT ELIEIISGA AL
Sbjct: 234 SALLENGASEQGARMSAMDNATRNAGEMIENLTIEFNRSRQAVITNELIEIISGAEAL 291
>sp|Q1GEU7|ATPG_RUEST ATP synthase gamma chain OS=Ruegeria sp. (strain TM1040) GN=atpG
PE=3 SV=1
Length = 291
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 165/298 (55%), Gaps = 54/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------- 95
S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE++R + F A++
Sbjct: 3 SLKDLKNRISSVKNTRKITKAMQMVAAAKLRRAQEAAEDARPYAERFNAVMAGLAASVGQ 62
Query: 96 -DTP------TVDAKKNVIVTISSDKGLCGGINSTAVKISK----------------SLH 132
DT T + ++V +++++GLCGG N+ K+++ ++
Sbjct: 63 SDTAPKLLAGTGSDQVQLLVVMTAERGLCGGFNANIAKLARQKVLDLQAAGKTVKILTVG 122
Query: 133 KLNSDI-----------ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKF 178
K D+ + +TE+++ + Y +A DIL EFD I YSKF
Sbjct: 123 KKGRDVLKREFGDLFVGHVDLTEVKR--VGYVDAQGIAKDILARFDAGEFDVATIFYSKF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMF 238
+VV+ +PT ++ E AE+ G +D YE ++ IL +L + +F
Sbjct: 181 QNVVTQIPTAQQIIPAEFDAEGAEATS--GVVD-YE----PSEEAILADLLPRGVATQIF 233
Query: 239 NAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LEN SEQGARMSAMD+++RNAGEM+D+LT+ YNR+RQA IT ELIEIISGA AL
Sbjct: 234 AGLLENGASEQGARMSAMDNATRNAGEMIDKLTIEYNRSRQAVITNELIEIISGAEAL 291
>sp|B8IN02|ATPG_METNO ATP synthase gamma chain OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=atpG PE=3 SV=1
Length = 292
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 162/299 (54%), Gaps = 55/299 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD-----TP 98
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN+R + A+LG+ TP
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTP 62
Query: 99 TVDAKK----------NVIVTISSDKGLCGGINSTAVKISKS----------------LH 132
+ + +++V ++++GLCG NS+ ++++ +
Sbjct: 63 GAETPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLARDHARRLVAEGKTVKIICVG 122
Query: 133 KLNSDI----------ELIITELQK-NPLNYTQVSVLADDILKNVE---FDALRIIYSKF 178
K DI ELI EL+ L + + +++L E FD + YS+F
Sbjct: 123 KKGYDILRREFRDQIVELI--ELRGVRQLGFENAEAVTENLLNRFEAGEFDIATLFYSRF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVM 237
SV++ +PT ++ E+ + + D+ YE E E GEIL L + +
Sbjct: 181 RSVIAQVPTAQQIIPAEI-----SPASESAQTDAAYEYEPEE--GEILAALLPKNLTVQI 233
Query: 238 FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct: 234 LRALLENAASEQGARMSAMDSATRNAGEMIKKQTLVYNRTRQAMITKELIEIISGAEAL 292
>sp|Q4R5B0|ATPG_MACFA ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis
GN=ATP5C1 PE=2 SV=1
Length = 298
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 171/292 (58%), Gaps = 49/292 (16%)
Query: 40 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFT 91
VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ ++ S L++
Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKAD 81
Query: 92 ALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS--------------------- 130
+ + D KK++++ +SSD+GLCG I+S+ K KS
Sbjct: 82 IKVPE----DKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKI 137
Query: 131 ---LHKLNSDIELI-ITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFL 185
L++ +SD L+ E+ + P + SV+A ++L + EFD +I+++F SV+S+
Sbjct: 138 RGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSVIFNRFRSVISYK 197
Query: 186 PTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENA 245
+ S + AES ++D+ ++LQN E+ + +++ ++ E++
Sbjct: 198 TEEKPIFSLNTIA-SAESMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESS 246
Query: 246 CSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 297
SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>sp|P36542|ATPG_HUMAN ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1
PE=1 SV=1
Length = 298
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 171/292 (58%), Gaps = 49/292 (16%)
Query: 40 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFT 91
VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ ++ S L++
Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEK-A 80
Query: 92 ALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS--------------------- 130
+ G P D KK++++ +SSD+GLCG I+S+ K KS
Sbjct: 81 DIKG--PE-DKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKI 137
Query: 131 ---LHKLNSDIELI-ITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFL 185
L++ +SD L+ E+ + P + SV+A ++L + EFD II++KF SV+S+
Sbjct: 138 RGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYK 197
Query: 186 PTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENA 245
+ S V A+S ++D+ ++LQN E+ + +++ ++ E+
Sbjct: 198 TEEKPIFSLNTVA-SADSMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKEST 246
Query: 246 CSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 297
SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>sp|Q5RBS9|ATPG_PONAB ATP synthase subunit gamma, mitochondrial OS=Pongo abelii GN=ATP5C1
PE=2 SV=1
Length = 297
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 169/291 (58%), Gaps = 49/291 (16%)
Query: 40 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFT 91
VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ ++ S L++
Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEK-A 80
Query: 92 ALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS--------------------- 130
+ G D KK++++ +SSD+GLCG I+S+ K KS
Sbjct: 81 DIKGPE---DKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGVGDKI 137
Query: 131 ---LHKLNSDIELI-ITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFL 185
L++ +SD L+ E+ + P + SV+A ++L + EFD II++KF SV+S+
Sbjct: 138 RGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYK 197
Query: 186 PTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENA 245
+ S V A+S ++D+ ++LQN E+ + +++ ++ E+
Sbjct: 198 TEEKPIFSLNTVA-SADSMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKEST 246
Query: 246 CSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>sp|Q28TJ7|ATPG_JANSC ATP synthase gamma chain OS=Jannaschia sp. (strain CCS1) GN=atpG
PE=3 SV=1
Length = 296
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 165/297 (55%), Gaps = 55/297 (18%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV------- 100
++NR+ SVK+ +KITKAM+MVAA+KLR Q AE +R + A++ +
Sbjct: 7 LKNRIASVKSTRKITKAMQMVAAAKLRRAQEAAEMARPYAEKMEAVMSGLASAVGNSEGA 66
Query: 101 ------DAKKNV--IVTISSDKGLCGGINSTAVKIS---------------------KSL 131
+ K V +V +++++GLCGG NST V+ + K
Sbjct: 67 PRLLAGNGKDQVHLLVVMTAERGLCGGFNSTIVRKARVHAQKLLGEGKTIKILTVGKKGR 126
Query: 132 HKLNSDI------ELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVV 182
+L D + ++++++ L Y + +A D+L E FD I +++F SV+
Sbjct: 127 EQLRRDYADHLIGHVDLSDVKR--LGYADAASIATDVLNRFEEDEFDVATIFFNRFESVI 184
Query: 183 SFLPTMATVLSP---ELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFN 239
S +PT AT + P E VE ++ G L YE E E +L++L + +F
Sbjct: 185 SQIPT-ATQIIPAVFEDVEEADDTSKDSGTL--YEYEPSEEA--VLEDLLPRGIATQIFT 239
Query: 240 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN SEQGARMSAMD+++RNAG+M+DRLT+ YNR+RQA IT+ELIEIISGA AL
Sbjct: 240 ALLENGASEQGARMSAMDNATRNAGDMIDRLTIEYNRSRQAVITSELIEIISGAEAL 296
>sp|Q5LNP0|ATPG_RUEPO ATP synthase gamma chain OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=atpG PE=3 SV=1
Length = 291
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 162/292 (55%), Gaps = 50/292 (17%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTP--------- 98
++NR+ SVK+ +KITKAM+MVAA+KLR Q AE +R + F A++
Sbjct: 7 LKNRIASVKSTRKITKAMQMVAAAKLRRAQESAEAARPYAERFNAVMAGLAASVGGSDSA 66
Query: 99 ------TVDAKKNVIVTISSDKGLCGGINSTAVKISK----SLHKLNSDIELIIT----- 143
T + +++V +++++GLCGG NS K+++ L ++++
Sbjct: 67 PLLLRGTGSDQVHLLVVMTAERGLCGGFNSNIAKLARVRANELLAKGKTVKILTVGKKGR 126
Query: 144 -----ELQKNPLNYTQVSVL-------ADDILKNV-------EFDALRIIYSKFHSVVSF 184
+ N + + +S + A DI ++V EFD I Y+KF +VV+
Sbjct: 127 DAMKRDFAANMVGHVDLSGIKALGYANAQDIARDVLGRFDAGEFDVATIFYAKFQNVVTQ 186
Query: 185 LPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLEN 244
LPT ++ P E E ES E+ ++ E E IL +L + +F+A+LEN
Sbjct: 187 LPTAQQII-PAAFEAEGESD----EVALFDYEPSEEA--ILADLLPRGVATQIFSALLEN 239
Query: 245 ACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
SEQGARMSAMD+++RNAGEM+D+LT+ +NR+RQA IT ELIEIISGA AL
Sbjct: 240 GASEQGARMSAMDNATRNAGEMIDKLTIEFNRSRQAVITNELIEIISGAEAL 291
>sp|Q91VR2|ATPG_MOUSE ATP synthase subunit gamma, mitochondrial OS=Mus musculus GN=Atp5c1
PE=1 SV=1
Length = 298
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 169/292 (57%), Gaps = 49/292 (16%)
Query: 40 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFT 91
VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ +V S L++
Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAD 81
Query: 92 ALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKS--------------------- 130
P D KK++I+ +SSD+GLCG I+S+ K K+
Sbjct: 82 I---KAPE-DKKKHLIIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGVGEKI 137
Query: 131 ---LHKLNSDIELI-ITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFL 185
L++ +SD L+ ++ + P + SV+A ++L + EFD II+++F SV+S+
Sbjct: 138 KGILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISYK 197
Query: 186 PTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENA 245
+ S + AE+ ++D+ ++LQN E+ + +++ ++ E+
Sbjct: 198 TEEKPIFSLNTIA-TAETMSIYDDIDA----------DVLQNYQEYNLANLIYYSLKEST 246
Query: 246 CSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 297
SEQ ARM+AMD++S+NA +M+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct: 247 TSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>sp|P35435|ATPG_RAT ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus
GN=Atp5c1 PE=1 SV=2
Length = 273
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 163/283 (57%), Gaps = 48/283 (16%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFTALLGDTPTV 100
+ R+KS+KNIQKITK+MKMVAA+K L+ +V S L++ + G P
Sbjct: 6 ITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEK-AEIKG--PE- 61
Query: 101 DAKKNVIVTISSDKGLCGGINSTAVK------------------------ISKSLHKLNS 136
D KK++I+ +SSD+GLCG I+S+ K I L++ +S
Sbjct: 62 DKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHS 121
Query: 137 DIELI-ITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSP 194
D L+ ++ + P + SV+A ++L + EFD II+++F SV+S+ + S
Sbjct: 122 DQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISYKTEEKPIFSF 181
Query: 195 ELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMS 254
V AE+ ++D+ ++LQN E+ + +++ ++ E+ SEQ ARM+
Sbjct: 182 STV-VAAENMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESTTSEQSARMT 230
Query: 255 AMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 297
AMD++S+NA +M+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct: 231 AMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALD 273
>sp|A1B8N9|ATPG_PARDP ATP synthase gamma chain OS=Paracoccus denitrificans (strain Pd
1222) GN=atpG PE=3 SV=1
Length = 290
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 168/298 (56%), Gaps = 55/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVK-------AENSRGLWQPFTALLGD 96
S + ++NR+ SVKN +KITKAM+MVAA+KLR Q A+ + TA
Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPYADRMAAVMAGLTAAAAG 62
Query: 97 TP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISK------------------- 129
+ T + +++++V ++S++GL GG NS+ VK+++
Sbjct: 63 SDMAPRLLAGTGEDRRHLLVVMTSERGLAGGFNSSIVKLARLRLQELQAQGKQVSILTVG 122
Query: 130 -----SLHKLNSDI---ELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKF 178
L + D+ + ++E+++ + Y +AD+IL N EFD + Y++F
Sbjct: 123 KKGREQLKREYGDLFVNHVDLSEVKR--IGYDNARAIADEILDRFDNGEFDVATLFYNRF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMF 238
SV+S +PT V+ P ++E E E+G L YE + + IL +L + +F
Sbjct: 181 ESVISQVPTARQVI-PAVIE-EGEAGAS--SLYDYEPD----ENAILNDLLPRSVATQVF 232
Query: 239 NAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LENA SEQGARM+AMD+++RNAG+M+DRLT YNR+RQA+IT ELIEIISGA AL
Sbjct: 233 AALLENAASEQGARMTAMDNATRNAGDMIDRLTTVYNRSRQAAITKELIEIISGAEAL 290
>sp|O01666|ATPG_DROME ATP synthase subunit gamma, mitochondrial OS=Drosophila
melanogaster GN=ATPsyn-gamma PE=2 SV=2
Length = 297
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 166/284 (58%), Gaps = 39/284 (13%)
Query: 41 RSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQ--VKAENSRGLW-QPFTALLGD 96
R ++T +++ R+KSVKNIQKIT++MKMV+A+K + +KA G+ Q F
Sbjct: 24 RGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQQFFEKTEI 83
Query: 97 TPTVDAK-KNVIVTISSDKGLCGGINSTAVKISKS---------------------LHKL 134
P A+ K +++ ++SD+GLCG +++ ++ + L +L
Sbjct: 84 QPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEANTKVFCVGDKSRAILSRL 143
Query: 135 -NSDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVL 192
+I ++ E+ + P + S +A+++L+ ++ +I+Y++F SVVS+ + +
Sbjct: 144 YGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIF 203
Query: 193 SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGAR 252
S VE+ KL DS + +++++ EF + ++F + E ACSEQ +R
Sbjct: 204 SGSTVEKSE----KLAVYDSLD-------SDVVKSYLEFSLASLIFYTMKEGACSEQSSR 252
Query: 253 MSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
M+AMD++S+NAGEM+D+LTLT+NRTRQA IT ELIEIISGA+AL
Sbjct: 253 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296
>sp|A4WUM8|ATPG_RHOS5 ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=atpG PE=3 SV=1
Length = 289
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 170/299 (56%), Gaps = 58/299 (19%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-GDTPTVDA 102
S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ G +V +
Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGS 62
Query: 103 --------------KKNVIVTISSDKGLCGGINSTAVKIS-------------------- 128
K ++V +++++GLCGG NS+ V+++
Sbjct: 63 SESAPRLLAGTGSDKVQLLVVMTAERGLCGGFNSSIVRLARAHAAKLLAEGKTVKILTVG 122
Query: 129 -KSLHKLNSDI------ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKF 178
K +L D+ + ++E+++ + Y +A D+L EFD I +++F
Sbjct: 123 KKGREQLRRDLGQHFIGHVDLSEVKR--MGYPVAQGIARDVLDRFDKGEFDVATIFFARF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVM 237
SV+S +PT V+ P + E E GE++S Y+ E E +L +L + +
Sbjct: 181 QSVISQIPTAQQVI-PAVFEGE-------GEVNSLYDYEPSEEG--VLADLLPRGVATQI 230
Query: 238 FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
F A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct: 231 FTALLENGASEQGARMSAMDNATRNAGDMINRLTIQYNRSRQAAITKELIEIISGAEAL 289
>sp|B9KPI7|ATPG_RHOSK ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=atpG PE=3 SV=1
Length = 289
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 170/298 (57%), Gaps = 56/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-GDTPTVDA 102
S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ G +V +
Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGS 62
Query: 103 --------------KKNVIVTISSDKGLCGGINSTAVKIS-------------------- 128
K +++V +++++GLCGG NS+ V+++
Sbjct: 63 SESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILTVG 122
Query: 129 -KSLHKLNSDI------ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKF 178
K +L D+ + ++E+++ + Y +A D+L EFD I +++F
Sbjct: 123 KKGREQLRRDLGQHFIGHVDLSEVKR--MGYPVAQGIARDLLDRFDKGEFDVATIFFARF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMF 238
SV+S +PT V+ P + E E G++ L YE ++ +L +L + +F
Sbjct: 181 QSVISQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIF 231
Query: 239 NAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct: 232 TALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
>sp|A3PIB8|ATPG_RHOS1 ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=atpG PE=3 SV=1
Length = 289
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 170/298 (57%), Gaps = 56/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-GDTPTVDA 102
S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ G +V +
Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGS 62
Query: 103 --------------KKNVIVTISSDKGLCGGINSTAVKIS-------------------- 128
K +++V +++++GLCGG NS+ V+++
Sbjct: 63 SESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILTVG 122
Query: 129 -KSLHKLNSDI------ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKF 178
K +L D+ + ++E+++ + Y +A D+L EFD I +++F
Sbjct: 123 KKGREQLRRDLGQHFIGHVDLSEVKR--MGYPVAQGIARDLLDRFDKGEFDVATIFFARF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMF 238
SV+S +PT V+ P + E E G++ L YE ++ +L +L + +F
Sbjct: 181 QSVISQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIF 231
Query: 239 NAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct: 232 TALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
>sp|Q3J432|ATPG_RHOS4 ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpG PE=3 SV=1
Length = 289
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 170/298 (57%), Gaps = 56/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL-GDTPTVDA 102
S + ++NR+ SVKN +KITKAM+MVAA+KLR Q AE +R + TA++ G +V +
Sbjct: 3 SLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSVGS 62
Query: 103 --------------KKNVIVTISSDKGLCGGINSTAVKIS-------------------- 128
K +++V +++++GLCGG NS+ V+++
Sbjct: 63 SESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILTVG 122
Query: 129 -KSLHKLNSDI------ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKF 178
K +L D+ + ++E+++ + Y +A D+L EFD I +++F
Sbjct: 123 KKGREQLRRDLGQHFIGHVDLSEVKR--MGYPVAQGIARDLLDRFDKGEFDVATIFFARF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMF 238
SV++ +PT V+ P + E E G++ L YE ++ +L +L + +F
Sbjct: 181 QSVINQVPTAQQVI-PAVFEGE----GEVSSLYDYE----PSEEGVLADLLPRGVATQIF 231
Query: 239 NAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct: 232 TALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
>sp|A7HT51|ATPG_PARL1 ATP synthase gamma chain OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=atpG PE=3 SV=1
Length = 294
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 164/296 (55%), Gaps = 47/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVK-------AEN-SRGLWQPFTALLG 95
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE R L T + G
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYAERMDRVLANLATGMTG 62
Query: 96 --DTPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISK-SLHKLNSDIE----LIIT 143
D P + A + ++++ ++D+GLCGG NS+ V++++ ++KL + + L +
Sbjct: 63 RSDAPALLAGTGSDQVHLVIVATADRGLCGGFNSSIVRLARQHINKLVGEGKTVKILTVG 122
Query: 144 ELQKNPLNYTQVSVL----------------ADDILKNV-------EFDALRIIYSKFHS 180
++ L S + A+DI + V EFD I YSKF +
Sbjct: 123 RKGRDALKRDHASRIVKSYEFTGIRHIGFEQAEDISRTVIDLFEAGEFDVATIFYSKFVN 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
VVS +PT A L P V +A LG YE E E GEIL+++ S +F A
Sbjct: 183 VVSQIPT-AQQLIPASVPADAGGSVDLGGA-VYEYEPDE--GEILKDILPRNLSVQIFRA 238
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LEN E GA+MSAMD+++RNAG+M+ +L +TYNR+RQA IT ELIEIISGA AL
Sbjct: 239 LLENVAGEFGAKMSAMDNATRNAGDMIKKLNITYNRSRQAMITKELIEIISGAEAL 294
>sp|Q11DD6|ATPG_MESSB ATP synthase gamma chain OS=Mesorhizobium sp. (strain BNC1) GN=atpG
PE=3 SV=1
Length = 290
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 162/295 (54%), Gaps = 49/295 (16%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------- 95
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R + A+L
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYAERMDAVLANVSASISG 62
Query: 96 -DTPTVDAKK-----NVIVTISSDKGLCGGINSTAVKISK-SLHKLNSD----------- 137
D P + A +++V ++D+GL G NS ++++ + KL ++
Sbjct: 63 ADAPPLMAGTGKDDVHLVVVCTADRGLAGSFNSQIARLAREHIRKLQANGRQVKIITVGK 122
Query: 138 --IELIITELQKNPLNYTQVSVL-------ADDILKNV-------EFDALRIIYSKFHSV 181
+L+ + K ++ ++ + AD I K V EFD +IYS+F SV
Sbjct: 123 KGYDLLRRDFGKLVIDRIELREVKQIGFANADAIAKKVIGLFEAGEFDVCTLIYSRFKSV 182
Query: 182 VSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAV 241
+S +PT ++ + + E ES G + YE E G IL +L + +F A+
Sbjct: 183 ISQIPTEQQIIPAAVPQAEGESTGAI-----YEYE--PDAGAILADLIPRNIAVQIFRAL 235
Query: 242 LENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
LENA E GA+M+AMD+++RNAGEM+++LT+TYNR RQA IT ELIEIISGA AL
Sbjct: 236 LENAAGEMGAKMTAMDNATRNAGEMINKLTITYNRQRQAQITKELIEIISGAEAL 290
>sp|Q2VZN1|ATPG_MAGSA ATP synthase gamma chain OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpG PE=3 SV=1
Length = 294
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 152/292 (52%), Gaps = 47/292 (16%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA----- 102
+R ++ SVK+ +KIT AMKMVAASKLR Q AE +R + +LG A
Sbjct: 7 LRMKIVSVKSTRKITSAMKMVAASKLRRAQTAAEAARPFAERMERMLGTLAASLAGQSGA 66
Query: 103 ----------KKNVIVTISSDKGLCGGINSTAVKISKSL--------------------- 131
K +++V +++D+GLCGG NS+ V+ +K++
Sbjct: 67 PRMISGTGFDKVHLLVAVTADRGLCGGFNSSIVRATKAMAADLLKQGKTIKIMPVGRKAR 126
Query: 132 HKLNSDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSF 184
+L D + E +N V AD + + EFD ++Y+KF S ++
Sbjct: 127 EQLRRDYGQYMIEGFENLGRKGIVFAEADQVASQISAMFDAEEFDVCTVVYNKFKSAIAQ 186
Query: 185 LPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLEN 244
T V+ + E+ A+S + G YE E E EIL + + MF A+LE+
Sbjct: 187 EVTRQQVIPFPVPEQAAKS--ETGPKAIYEFEPSEE--EILAEILPRNLATQMFRALLES 242
Query: 245 ACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
SEQGARM+AMD+++RNAG+M++ L + YNR+RQA IT ELIEIISGA AL
Sbjct: 243 QASEQGARMTAMDNATRNAGDMINALAIKYNRSRQAQITKELIEIISGAEAL 294
>sp|A7IH30|ATPG_XANP2 ATP synthase gamma chain OS=Xanthobacter autotrophicus (strain ATCC
BAA-1158 / Py2) GN=atpG PE=3 SV=1
Length = 291
Score = 147 bits (372), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 158/293 (53%), Gaps = 52/293 (17%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD----------- 96
+RNR+ SVK QKITKAM+MVAA+KLR Q+ AE +R + +LG+
Sbjct: 7 LRNRIASVKATQKITKAMQMVAAAKLRRAQMAAEAARPYAERMDTVLGNLAAGIVGAGQA 66
Query: 97 ----TPTVDAKKNVIVTISSDKGLCGGINSTAVKISK----------------------- 129
T ++K++++ + ++GLCG N++ V++++
Sbjct: 67 PVLIAGTGQSQKHLLLVCTGERGLCGAFNTSIVRLAREKAQQLIGEGKDVTFFCVGRKGY 126
Query: 130 -SLHKLNSDIELIITELQK-NPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSF 184
L + D + + +L+ L++ S +A IL ++ FD + YS F SV+S
Sbjct: 127 DQLRRTYPDRIIELVDLRSVRTLSFKNASDIASKILTLLDQGAFDVCTLFYSNFKSVISQ 186
Query: 185 LPTMATVLSPELVEREAES-GGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLE 243
+PT ++ P + E + E GG + YE E E +IL +L + +F A+LE
Sbjct: 187 IPTAQQII-PAVFEAQDEGEGGPV-----YEYEPAEE--DILADLLPRNIAVQIFRALLE 238
Query: 244 NACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
N S G++MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct: 239 NQASFYGSQMSAMDNATRNAGDMIKKQTLIYNRTRQAMITKELIEIISGAEAL 291
>sp|P07227|ATPG_RHORU ATP synthase gamma chain OS=Rhodospirillum rubrum GN=atpG PE=3 SV=1
Length = 299
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 157/295 (53%), Gaps = 48/295 (16%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA----- 102
+R+R+ SVK+ QKIT AMKMVAAS+LR Q AE +R Q +LG+ A
Sbjct: 7 LRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGMAGA 66
Query: 103 --------KKNV--IVTISSDKGLCGGINSTAVKISKSLHK----LNSDIELI------- 141
K NV IV +++++GLCGG N + ++ +++L + ++L+
Sbjct: 67 SPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLLCIGKKGR 126
Query: 142 --------------ITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSF 184
I + + ++ + S L D+ + EFD ++Y++F S +S
Sbjct: 127 DGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQ 186
Query: 185 LPTMATVLS---PELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAV 241
+ T ++ P V ++ G YE E E EIL +L + +F +
Sbjct: 187 VVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEE--EILADLLPKNVAIQVFRGM 244
Query: 242 LENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
LE+ SEQGARM+AMD+++RNAG+M+ +L+LTYNRTRQA IT ELIEIISGA A+
Sbjct: 245 LESFASEQGARMTAMDNATRNAGDMIKKLSLTYNRTRQAQITKELIEIISGAEAI 299
>sp|Q2RV19|ATPG_RHORT ATP synthase gamma chain OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=atpG PE=3 SV=1
Length = 299
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 157/295 (53%), Gaps = 48/295 (16%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA----- 102
+R+R+ SVK+ QKIT AMKMVAAS+LR Q AE +R Q +LG+ A
Sbjct: 7 LRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGMAGA 66
Query: 103 --------KKNV--IVTISSDKGLCGGINSTAVKISKSLHK----LNSDIELI------- 141
K NV IV +++++GLCGG N + ++ +++L + ++L+
Sbjct: 67 SPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLLCIGKKGR 126
Query: 142 --------------ITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSF 184
I + + ++ + S L D+ + EFD ++Y++F S +S
Sbjct: 127 DGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCTLVYNRFQSAISQ 186
Query: 185 LPTMATVLS---PELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAV 241
+ T ++ P V ++ G YE E E EIL +L + +F +
Sbjct: 187 VVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEE--EILADLLPKNVAIQVFRGM 244
Query: 242 LENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
LE+ SEQGARM+AMD+++RNAG+M+ +L+LTYNRTRQA IT ELIEIISGA A+
Sbjct: 245 LESFASEQGARMTAMDNATRNAGDMIKKLSLTYNRTRQAQITKELIEIISGAEAI 299
>sp|P72246|ATPG_RHOCA ATP synthase gamma chain OS=Rhodobacter capsulatus GN=atpG PE=1
SV=3
Length = 290
Score = 147 bits (371), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 161/298 (54%), Gaps = 55/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL----GDTPT 99
S + ++NR+ SVKN +KITKAM+MVAA+ +R Q AE +R + A++ G +
Sbjct: 3 SLKDLKNRIVSVKNTRKITKAMQMVAAANIRRAQESAEAARPYAERMNAVMSSLAGAVGS 62
Query: 100 VDA-----------KKNVIVTISSDKGLCGGINSTAVKISKS------------------ 130
D K +++V ++ ++GLCGG N+ K++K+
Sbjct: 63 TDGAPRLLAGTGSDKVHLLVIMTGERGLCGGFNANIAKLAKAKAMELLAQGKTVKILTVG 122
Query: 131 ---LHKLNSDI------ELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKF 178
L D+ + +++++K L+Y ++ +I+ E +D I +S F
Sbjct: 123 KKGRDALRRDLGQYYIDHIDLSDVKK--LSYPVAQKISQNIIDRFEAGEYDVATIFFSVF 180
Query: 179 HSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMF 238
SV+S +PT V+ P E +A S + Y+ E G+ EIL L + +F
Sbjct: 181 QSVISQVPTAKQVI-PAQFETDAASASAV-----YDYEPGDQ--EILTALLPRAVATAIF 232
Query: 239 NAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN S GA+MSAMD+++RNAG+M+DRLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct: 233 AALLENNASFNGAQMSAMDNATRNAGDMIDRLTIEYNRSRQAAITKELIEIISGAEAL 290
>sp|B9LZ85|ATPG_GEOSF ATP synthase gamma chain OS=Geobacter sp. (strain FRC-32) GN=atpG
PE=3 SV=1
Length = 287
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 159/299 (53%), Gaps = 58/299 (19%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++ R+ SVKN +ITKAMKMV+A+KLR Q +R P+ A LG+
Sbjct: 3 SLKSIKKRIVSVKNTGQITKAMKMVSAAKLRRAQENVVAAR----PYAAKLGEVLGRLSR 58
Query: 97 ------TPTVDAK---KNVIVTISSDKGLCGGINSTAVKISKSLHKLN----SDIELIIT 143
+P + + K +++ ++SD+GLCGG N+ K ++ K +D+ ++
Sbjct: 59 NQDADSSPLMIKRTTGKALLIVVTSDRGLCGGFNANLCKAAERFVKERGAEFTDLSIMTI 118
Query: 144 -----ELQKN-------------PLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVV 182
E KN LNY ++LA ++++ EFD + IIY+ F SV+
Sbjct: 119 GRKGYEFLKNRQKIRKNFGTVFSNLNYQTAALLAQEVIQGYLDEEFDEVFIIYNAFRSVM 178
Query: 183 S---FLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFN 239
S L + V PE + E YE E GE+L E Q +F
Sbjct: 179 SQDITLEQLLPVTPPEAADEE------YAPEYIYEPSKSELLGELLPKHIEVQ----IFK 228
Query: 240 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 298
++LE+ SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G
Sbjct: 229 SLLESVASEHGARMTAMDSASKNANEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 287
>sp|B5ZSN8|ATPG_RHILW ATP synthase gamma chain OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpG PE=3 SV=1
Length = 294
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 154/296 (52%), Gaps = 47/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L +
Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAKAVTD 62
Query: 97 --------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISK----------------SLH 132
T T + +++V ++++GLCGG NS + ++ ++
Sbjct: 63 ADGAPTLMTGTGKDQVHLLVVCTAERGLCGGFNSQIARFARDHVRKLVAEGKTVKIFTVG 122
Query: 133 KLNSDI------ELIITELQKNPL------NYTQVSVLADDILKNVEFDALRIIYSKFHS 180
K DI LII + + N Q+ D+ EFD + YS+F S
Sbjct: 123 KKGYDILRREYASLIIERKELRDVKRIGFENADQIGKRIIDMYAAGEFDVCTLFYSEFKS 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
V+S +PT ++ +AE G + YE + IL++L S +F A
Sbjct: 183 VISQIPTAQQLIPASTGAVQAEDAAHAGAVYEYEPD----PASILEDLIPRNISVQIFRA 238
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LEN E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL
Sbjct: 239 LLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294
>sp|B3PQ69|ATPG_RHIE6 ATP synthase gamma chain OS=Rhizobium etli (strain CIAT 652)
GN=atpG PE=3 SV=1
Length = 294
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 159/299 (53%), Gaps = 53/299 (17%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q +L +
Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMNTVLANIAKAVTD 62
Query: 97 --------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISK----------------SLH 132
T T + +++V ++++GLCGG NS + ++ ++
Sbjct: 63 ADGAPVLMTGTGKDQVHLLVVCTAERGLCGGFNSQIARFARDHVRKLVAEGKTVKIFTVG 122
Query: 133 KLNSDI------ELIIT-----ELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHS 180
K DI LI+ E++K N Q+ ++ + EFD + YS+F S
Sbjct: 123 KKGYDILRREFASLIVERKELREVKKIGFENADQIGKRIIEMFEAGEFDVCTLFYSEFKS 182
Query: 181 VVSFLPTMATVL---SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVM 237
V+S +PT ++ +PE V +A+ G + YE E IL +L S +
Sbjct: 183 VISQVPTAQQLIPAKAPEAVAEDADHAGAV-----YEYE--PDPAAILDDLIPRNISVQI 235
Query: 238 FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
F A+LEN E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL
Sbjct: 236 FRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294
>sp|Q5NQZ0|ATPG_ZYMMO ATP synthase gamma chain OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=atpG PE=3 SV=1
Length = 298
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 157/302 (51%), Gaps = 55/302 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPF-----------TA 92
S + ++ R+ S+K+I KIT+AM+MVA++KLR +AE+ +P+ A
Sbjct: 3 SLKSLKTRVSSIKSISKITRAMQMVASAKLR----RAESRLAAARPYAKRMAQVMSLLAA 58
Query: 93 LLGDTPTV--------DAKKNVIVTISSDKGLCGGINSTAVKISK----SLHKLNSDIEL 140
TP + ++++ SSD GLCGG NS + ++ +L ++
Sbjct: 59 RAAGTPNALPLLNGRGKDQTHLLIVTSSDAGLCGGFNSNIYRQARDRALALEAAGKTVQF 118
Query: 141 IITELQK---------------------NPLNYTQVSVLADDILKNV---EFDALRIIYS 176
+ ++ +P+ + +A D+++ EFD + +S
Sbjct: 119 YVIGIKNAPVIRNNFPGKTIHETKREETSPVTFENAQKIAQDLIQRFNAGEFDVAHLFFS 178
Query: 177 KFHSVVSFLPTMATVL--SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFS 234
+HSV+S +PT ++ +PE + + ++ + E E E IL L +
Sbjct: 179 HYHSVLSQVPTETQIIPAAPEGDDTKNQAAANDASSGAIEFEPDEET--ILSTLLPRSIA 236
Query: 235 CVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGAS 294
++ A+LENA SEQG+RMSAM++S+RNAGEM+ +L++ YNR RQA+ITTEL+EIISGA
Sbjct: 237 VAIYQAMLENATSEQGSRMSAMENSTRNAGEMISKLSIQYNRLRQAAITTELVEIISGAE 296
Query: 295 AL 296
AL
Sbjct: 297 AL 298
>sp|Q74GY1|ATPG_GEOSL ATP synthase gamma chain OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=atpG PE=3 SV=1
Length = 287
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 162/296 (54%), Gaps = 52/296 (17%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++ R+ SVKN ++ITKAMKMV+A+KLR Q +R P+ LG+
Sbjct: 3 SLKSIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAAR----PYAKKLGEVLQRLAK 58
Query: 97 ------TPTVD---AKKNVIVTISSDKGLCGGINSTAVKISKSL--HKLNSDIELIIT-- 143
+P + ++K +++ ++SD+GLCGG N+ K ++ K E+ +T
Sbjct: 59 SQDESGSPLMQQRLSQKALLIVVTSDRGLCGGFNANICKAAERFIKEKKAEFAEISVTTV 118
Query: 144 ------------ELQKN------PLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVV 182
++ KN L+Y ++LA ++++ E+D + I+++ F SV+
Sbjct: 119 GRKGYEFLKNRQKIHKNYGNVLANLSYPAAALLAQEMIEGYIAEEYDEVYILFNAFKSVM 178
Query: 183 SFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVL 242
S T+ +L + EA S + YE GE E+L E Q +F A+L
Sbjct: 179 SQDITLEKLLP---IAPEAASTEEYAPEYIYEPSKGELLAELLPKHIEVQ----VFKALL 231
Query: 243 ENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 298
E+ SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G
Sbjct: 232 ESVASEHGARMTAMDSASKNATEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 287
>sp|Q39Q55|ATPG_GEOMG ATP synthase gamma chain OS=Geobacter metallireducens (strain GS-15
/ ATCC 53774 / DSM 7210) GN=atpG PE=3 SV=1
Length = 287
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 163/296 (55%), Gaps = 52/296 (17%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++ R+ SVKN ++ITKAMKMV+A+KLR Q +R P+ LG+
Sbjct: 3 SLKSIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAAR----PYAKKLGEVLDRLAK 58
Query: 97 ------TPTVD---AKKNVIVTISSDKGLCGGINSTAVKISKSL--HKLNSDIELIIT-- 143
+P + ++K ++V ++SD+GLCGG N+ K ++ K E+ +T
Sbjct: 59 SQDGSSSPLLQKRISQKALLVVVTSDRGLCGGFNANICKAAERFIREKKAEFAEISVTTV 118
Query: 144 ------------ELQKN------PLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVV 182
++ KN L+Y ++LA ++++ E+D + ++++ F SV+
Sbjct: 119 GRKGFEFLKNRQKIHKNYGNVLSNLSYPTAALLAQEVVEGYVAEEYDEVYLLFNAFRSVM 178
Query: 183 SFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVL 242
S T+ +L P + E AE + Y E +KGE+L L +F A+L
Sbjct: 179 SQDITLQQLL-PIVPEETAEEE----YVPEYIYE--PSKGELLDELLPKHIEVQVFKALL 231
Query: 243 ENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 298
E+ SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G
Sbjct: 232 ESVASEHGARMTAMDSASKNATEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 287
>sp|A5FZ53|ATPG_ACICJ ATP synthase gamma chain OS=Acidiphilium cryptum (strain JF-5)
GN=atpG PE=3 SV=1
Length = 296
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 45/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------D 96
S + +RNR+ SVK+ QKITKAMKMVAA+KLR Q +AE +R A++G +
Sbjct: 3 SLKALRNRIASVKSTQKITKAMKMVAAAKLRRAQAQAEAARPYATRMAAMMGALAEGAAE 62
Query: 97 TPTVDA--------KKNVIVTISSDKGLCGGINST-----------------AVKI---- 127
P A + ++IV +S+D+GL G N++ V++
Sbjct: 63 NPNAPALLVGNGADRTHLIVVVSADRGLAGPFNASINRAARARARKLEAEGKQVRLFTVG 122
Query: 128 SKSLHKLNSDI-ELIITE---LQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHS 180
K D+ E II E + K + + +A+ I+ + +FD +++++F S
Sbjct: 123 RKGRDFFRRDMREKIIGEANFVGKKTIEFADAEAIANQIIAAFNDGKFDVCTLMFNRFVS 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
V+S +P+ ++ + ++ G YEIE + G +L L + +++A
Sbjct: 183 VMSQVPSETPLIPASAGQAANDNAGSDQPAGDYEIEPDD--GTLLDRLLPRNLAVQIYSA 240
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LE+A EQGARM+AMD+++RNAGEM++RLTL YNRTRQA+IT ELIEIISGA AL
Sbjct: 241 LLESAAGEQGARMTAMDNATRNAGEMINRLTLNYNRTRQANITKELIEIISGAEAL 296
>sp|Q98EV7|ATPG_RHILO ATP synthase gamma chain OS=Rhizobium loti (strain MAFF303099)
GN=atpG PE=3 SV=1
Length = 294
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 162/296 (54%), Gaps = 47/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL--------- 94
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R + ++L
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSERMGSVLANITQAIGG 62
Query: 95 -GDTP---TVDAKKNV--IVTISSDKGLCGGINSTAVKISKS-LHKLNSD---IELIIT- 143
GD P T K NV +V ++++GLCGG NS ++++ + +L +D +++I
Sbjct: 63 GGDAPALMTGTGKDNVHLLVVCTAERGLCGGFNSQIARLARDHIRRLLADGKQVKIICVG 122
Query: 144 ------------ELQKNPLNYTQVSVL----ADDILKNV-------EFDALRIIYSKFHS 180
+ + ++ +V L AD I K V FD + YS+F S
Sbjct: 123 KKGFDILRRDYASMILDRVDLREVKTLGFVNADAIAKKVIHLFNEGAFDICTLFYSQFKS 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
V+S +PT ++ + A + + YE E GEIL +L S +F A
Sbjct: 183 VISQVPTAQQIIPAGVASAPAAAVDGGNAVYEYEPE----PGEILSDLIPRNISVQVFRA 238
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LENA E GA+MSAMD+++RNAGEM+++L++TYNR RQA IT ELIEIISGA AL
Sbjct: 239 LLENAAGEMGAKMSAMDNATRNAGEMINKLSITYNRQRQAQITKELIEIISGAEAL 294
>sp|Q92LK7|ATPG_RHIME ATP synthase gamma chain OS=Rhizobium meliloti (strain 1021)
GN=atpG PE=3 SV=1
Length = 294
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 151/296 (51%), Gaps = 47/296 (15%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q A+L +
Sbjct: 3 SLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMAAVLANIAQAVGA 62
Query: 97 --------TPTVDAKKNVIVTISSDKGLCGGINST-----------------AVKI---- 127
T T ++++ ++++GLCGG NS VKI
Sbjct: 63 DDSAPRLMTGTGRDDTHLVIVCTAERGLCGGFNSQIARFARDHVRKLLAQGKTVKIICVG 122
Query: 128 SKSLHKLNSDIELIIT------ELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHS 180
K L D +I E++K N ++ ++ EFD + YS+F S
Sbjct: 123 KKGFDMLRRDFASLIIDRVDLREVKKIGFENADRIGHKVIELFDKGEFDVCTLFYSEFKS 182
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
V+S +PT ++ E A G + YE E G IL +L S +F A
Sbjct: 183 VISQIPTAQQLIPASAGEVAAAEGEGASAIYEYEPEAGA----ILSDLIPRNISVQIFRA 238
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LEN E GA+MSAMD+++RNAGEM+D+LTL+YNR RQA IT ELIEIISGA AL
Sbjct: 239 LLENVAGEMGAKMSAMDNATRNAGEMIDKLTLSYNRQRQAQITKELIEIISGAEAL 294
>sp|B4RD46|ATPG_PHEZH ATP synthase gamma chain OS=Phenylobacterium zucineum (strain HLK1)
GN=atpG PE=3 SV=1
Length = 290
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 154/293 (52%), Gaps = 53/293 (18%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL--------GD-TP 98
+RNR+ SVK QKITKAM+MVAA+KLR Q A+N+R Q +++ GD P
Sbjct: 7 MRNRIGSVKATQKITKAMQMVAAAKLRKAQDAAQNARPYAQRMASVIANLAAGVSGDGAP 66
Query: 99 TVDA-----KKNVIVTISSDKGLCGGINSTAVKISK----SLHKLNSDIELIIT------ 143
+ A +++++V +SD+GL GG NS V+ ++ +L D+ +I
Sbjct: 67 KLLAGTGSDRRHLVVVATSDRGLAGGFNSAIVRAARERINALSAEGKDVRVITIGRKARD 126
Query: 144 --------------ELQKNP--LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPT 187
E NP +VS ++ + E D + +++S F SVV+ PT
Sbjct: 127 QLRRLAGERLVATYEAGSNPSLAVAEEVSARIQEMFEAGEVDVVHLVFSSFKSVVTQQPT 186
Query: 188 MATVLSPELVEREAESGGKLGELD----SYEIEGGETKGEILQNLAEFQFSCVMFNAVLE 243
+ ++ E+ +A LD +YE E E +IL+ L + + +A LE
Sbjct: 187 VRQLIPAEVAAGQAP-------LDLKGATYEYEPDEE--QILETLLPRNVTTQLLSATLE 237
Query: 244 NACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
N A+M+AMD+++RNAG+M+ LTL YNR+RQA IT ELIEIISGA AL
Sbjct: 238 NQAGFYAAQMTAMDNATRNAGDMIASLTLQYNRSRQAQITKELIEIISGAEAL 290
>sp|A9M838|ATPG_BRUC2 ATP synthase gamma chain OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=atpG PE=3 SV=1
Length = 292
Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 157/297 (52%), Gaps = 51/297 (17%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------- 95
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSG 62
Query: 96 -DTPTV---DAKKNV--IVTISSDKGLCGGINSTAVKISK----------------SLHK 133
D P + K NV +V ++++GLCGG NS ++++ ++ K
Sbjct: 63 EDAPALMVGTGKDNVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGK 122
Query: 134 LNSDI-----------ELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFH 179
+DI + + E+++ L + + I+K E FD + YS+F
Sbjct: 123 KGADILRREFSALLHDHVDLREVKQ--LAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFK 180
Query: 180 SVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFN 239
SV+S +PT A L P + EAE + YE + IL L S +F
Sbjct: 181 SVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFR 235
Query: 240 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct: 236 ALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
>sp|Q8UC75|ATPG_AGRT5 ATP synthase gamma chain OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=atpG PE=3 SV=1
Length = 292
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 160/291 (54%), Gaps = 47/291 (16%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPT-VDA---- 102
++NR+ SVK QKITKAMKMVAA+KLR Q AE +R Q +A+L + T V+A
Sbjct: 7 LKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMSAVLANIATAVEADVAP 66
Query: 103 -------KKNV--IVTISSDKGLCGGINSTAVKISKS-LHKLNSDIEL--IITELQK--N 148
K +V +V ++++GLCGG NS + ++ KL S+ + IIT +K +
Sbjct: 67 ALMTGTGKDDVHLLVVCTAERGLCGGFNSQIARFARDQARKLISEGKTVKIITVGKKGYD 126
Query: 149 PLNYTQVSVL----------------ADDILKNV-------EFDALRIIYSKFHSVVSFL 185
L S++ AD I K V EFD +IYS+F SV+S +
Sbjct: 127 SLRREFASLIIERIELRDVKKVGFENADQIAKKVISLFNAGEFDVCTLIYSEFKSVISQI 186
Query: 186 PTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENA 245
PT ++ EA + + YE E IL++L S +F A+LEN
Sbjct: 187 PTGLQLIPAATPVVEA---AETTQTAVYEYE--PDAASILEDLIPRNISVQVFRALLENV 241
Query: 246 CSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL
Sbjct: 242 AGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 292
>sp|A5G9D7|ATPG_GEOUR ATP synthase gamma chain OS=Geobacter uraniireducens (strain Rf4)
GN=atpG PE=3 SV=1
Length = 287
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 160/298 (53%), Gaps = 56/298 (18%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD------- 96
S + ++ R+ SVKN ++ITKAMKMV+A+KLR Q +R P+ LG+
Sbjct: 3 SLKSIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAAR----PYAKKLGEVLERLSK 58
Query: 97 ------TPTVDAK---KNVIVTISSDKGLCGGINSTAVKISKSLHKLN----SDIELII- 142
+P ++ + K +++ +SSD+GLCGG N+ K ++ K +++ ++
Sbjct: 59 SQDVDGSPLMEKRQGGKALLIIVSSDRGLCGGFNANICKAAERFAKERGSEFTELSMMTI 118
Query: 143 ----TELQKN-------------PLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVV 182
E KN LNY +++A +++ E+D + ++++ F SV+
Sbjct: 119 GRKGYEFLKNRHKIYKNYANIFGTLNYQTAALIARELIDGYLAEEYDEVYLLFNAFKSVM 178
Query: 183 SFLPTMATVL--SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
+ T+ +L +PE+ E + + E +K +L L MF A
Sbjct: 179 TQDITLEQLLPVTPEVAAEEEYAPEYIYE---------PSKAALLDELLPKHIEVQMFKA 229
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 298
+LE+ SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISG+ +++G
Sbjct: 230 MLESVASEHGARMTAMDSASKNASEMIGKLTLQYNRARQAAITTELMEIISGSESIKG 287
>sp|Q21CY6|ATPG_RHOPB ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain
BisB18) GN=atpG PE=3 SV=1
Length = 292
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 151/292 (51%), Gaps = 49/292 (16%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD----------- 96
+R R+ S K QKITKAM+MVAASKLR Q+ AE +R + A++ +
Sbjct: 7 MRVRIASTKATQKITKAMQMVAASKLRRAQLAAEAARPYAERMDAVISNIASAAAGSPGA 66
Query: 97 ----TPTVDAKKNVIVTISSDKGLCGGINSTAVKISK----SLHKLNSDIELIIT----- 143
T + ++++ + ++GL G NS+ V++++ SL +++L
Sbjct: 67 PVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERALSLMNQGKEVKLFCVGRKGY 126
Query: 144 ---------------ELQK-NPLNYTQVSVLADDI---LKNVEFDALRIIYSKFHSVVSF 184
EL+ L + +A + N EFD + YS+F SV+S
Sbjct: 127 EQLRRTFDRQIVENIELRSVRQLGFVNAEDIAHKVVARFNNGEFDVCTLFYSRFKSVISQ 186
Query: 185 LPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLEN 244
+PT ++ P +VE A + G SYE E E EIL L + +F A+LEN
Sbjct: 187 IPTAQQII-PLVVEAPAANAGPA---TSYEYEPEED--EILAGLLPRNLAVQIFRALLEN 240
Query: 245 ACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
S GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct: 241 NASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI 292
>sp|Q8FYR4|ATPG_BRUSU ATP synthase gamma chain OS=Brucella suis biovar 1 (strain 1330)
GN=atpG PE=3 SV=1
Length = 292
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 51/297 (17%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------- 95
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSG 62
Query: 96 -DTPTV---DAKKNV--IVTISSDKGLCGGINSTAVKISK----------------SLHK 133
D P + K +V +V ++++GLCGG NS ++++ ++ K
Sbjct: 63 EDAPALMVGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGK 122
Query: 134 LNSDI-----------ELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFH 179
+DI + + E+++ L + + I+K E FD + YS+F
Sbjct: 123 KGADILRREFSALLHDHVDLREVKQ--LAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFK 180
Query: 180 SVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFN 239
SV+S +PT A L P + EAE + YE + IL L S +F
Sbjct: 181 SVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFR 235
Query: 240 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct: 236 ALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
>sp|A9WWS3|ATPG_BRUSI ATP synthase gamma chain OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=atpG PE=3 SV=1
Length = 292
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 51/297 (17%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------- 95
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSG 62
Query: 96 -DTPTV---DAKKNV--IVTISSDKGLCGGINSTAVKISK----------------SLHK 133
D P + K +V +V ++++GLCGG NS ++++ ++ K
Sbjct: 63 EDAPALMVGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGK 122
Query: 134 LNSDI-----------ELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFH 179
+DI + + E+++ L + + I+K E FD + YS+F
Sbjct: 123 KGADILRREFSALLHDHVDLREVKQ--LAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFK 180
Query: 180 SVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFN 239
SV+S +PT A L P + EAE + YE + IL L S +F
Sbjct: 181 SVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFR 235
Query: 240 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct: 236 ALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
>sp|A5VSE2|ATPG_BRUO2 ATP synthase gamma chain OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=atpG PE=3 SV=1
Length = 292
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 51/297 (17%)
Query: 44 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG-------- 95
S + +RNR+ SVK QKITKAM+MVAA+KLR Q AE +R Q A+L
Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSG 62
Query: 96 -DTPTV---DAKKNV--IVTISSDKGLCGGINSTAVKISK----------------SLHK 133
D P + K +V +V ++++GLCGG NS ++++ ++ K
Sbjct: 63 EDAPALMVGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGK 122
Query: 134 LNSDI-----------ELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFH 179
+DI + + E+++ L + + I+K E FD + YS+F
Sbjct: 123 KGADILRREFSALLHDHVDLREVKQ--LAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFK 180
Query: 180 SVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFN 239
SV+S +PT A L P + EAE + YE + IL L S +F
Sbjct: 181 SVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFR 235
Query: 240 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct: 236 ALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
>sp|Q2N8Z4|ATPG_ERYLH ATP synthase gamma chain OS=Erythrobacter litoralis (strain
HTCC2594) GN=atpG PE=3 SV=1
Length = 290
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 155/296 (52%), Gaps = 59/296 (19%)
Query: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD----------- 96
+++R+ SVK+ QKITKA +MVAA+KLR Q AE +R P+ L D
Sbjct: 7 LKDRIGSVKSTQKITKAKQMVAAAKLRRAQANAEAAR----PYAERLADVMASLAGKVSG 62
Query: 97 --TPTVDA-----KKNVIVTISSDKGLCGGINSTAVKISKSLHK----LNSDIELII--- 142
P + A +K+++V +++DKGLCGG+NS VK +K+ K D++ +
Sbjct: 63 DSAPRLLAGSGNDQKHLLVVVNTDKGLCGGLNSNIVKEAKAQAKKLIAAGKDVQFYLVGK 122
Query: 143 -------------------TELQKNPLNYTQVSVLAD---DILKNVEFDALRIIYSKFHS 180
T K P + + +A+ D+ + EFD ++Y F S
Sbjct: 123 KGRAPIKRDYEKQIAKHFDTSTVKQP-GFEEADAIANELIDMFEAGEFDVAHLVYPTFKS 181
Query: 181 VVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNA 240
+ PT ++ E E G + E YE E E+L + Q +F A
Sbjct: 182 ALVQDPTTNQLIPVPSPEGEGTGGDAVVE---YEPGEEEILEELLPRYVKTQ----LFGA 234
Query: 241 VLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 296
+LE SEQGA M+AMD+++RNAG+++++LT+ YNR+RQA+ITTELIEII+GA AL
Sbjct: 235 LLEREASEQGASMTAMDNATRNAGDLINKLTIQYNRSRQAAITTELIEIIAGAEAL 290
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,274,335
Number of Sequences: 539616
Number of extensions: 3511425
Number of successful extensions: 12965
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 10484
Number of HSP's gapped (non-prelim): 1190
length of query: 298
length of database: 191,569,459
effective HSP length: 117
effective length of query: 181
effective length of database: 128,434,387
effective search space: 23246624047
effective search space used: 23246624047
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)