Query 040120
Match_columns 131
No_of_seqs 109 out of 1138
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 05:19:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040120.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040120hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 99.8 3.3E-19 7.2E-24 127.8 12.1 122 2-126 105-227 (231)
2 cd03185 GST_C_Tau GST_C family 99.8 1.3E-18 2.8E-23 114.4 11.2 114 2-120 12-125 (126)
3 cd03184 GST_C_Omega GST_C fami 99.8 5.3E-19 1.1E-23 116.5 9.0 113 2-120 11-123 (124)
4 cd03201 GST_C_DHAR GST_C famil 99.8 1.9E-18 4.2E-23 113.8 11.0 110 4-120 10-120 (121)
5 cd03198 GST_C_CLIC GST_C famil 99.8 1.2E-17 2.7E-22 111.5 11.8 113 5-119 8-133 (134)
6 cd03190 GST_C_ECM4_like GST_C 99.8 4.4E-18 9.5E-23 114.8 8.7 116 2-123 13-131 (142)
7 cd03186 GST_C_SspA GST_N famil 99.7 2E-16 4.2E-21 101.4 9.1 95 2-107 12-106 (107)
8 TIGR00862 O-ClC intracellular 99.7 3.2E-15 6.8E-20 108.7 12.8 113 8-122 105-232 (236)
9 cd03188 GST_C_Beta GST_C famil 99.6 8.9E-16 1.9E-20 98.8 7.6 96 2-108 11-114 (114)
10 cd03203 GST_C_Lambda GST_C fam 99.6 2.4E-15 5.2E-20 98.7 9.1 85 30-118 34-119 (120)
11 cd03207 GST_C_8 GST_C family, 99.6 5.7E-15 1.2E-19 93.9 9.3 97 1-109 5-101 (103)
12 cd03196 GST_C_5 GST_C family, 99.6 1.2E-14 2.7E-19 94.7 8.2 77 23-107 38-114 (115)
13 PF00043 GST_C: Glutathione S- 99.6 3.8E-14 8.3E-19 88.6 9.5 71 23-102 25-95 (95)
14 cd03209 GST_C_Mu GST_C family, 99.6 5.5E-14 1.2E-18 92.1 9.8 94 8-111 16-110 (121)
15 PRK09481 sspA stringent starva 99.5 4.9E-14 1.1E-18 100.5 10.0 85 20-113 121-205 (211)
16 cd03178 GST_C_Ure2p_like GST_C 99.5 1.1E-14 2.4E-19 93.8 6.1 78 21-108 35-112 (113)
17 cd03182 GST_C_GTT2_like GST_C 99.5 3E-14 6.5E-19 92.3 8.0 93 2-104 13-117 (117)
18 cd03210 GST_C_Pi GST_C family, 99.5 7.7E-14 1.7E-18 92.1 8.8 97 7-110 16-112 (126)
19 cd03177 GST_C_Delta_Epsilon GS 99.5 3.2E-14 6.9E-19 92.7 6.3 76 23-108 35-110 (118)
20 cd03181 GST_C_EFB1gamma GST_C 99.5 7.5E-14 1.6E-18 91.2 7.4 101 2-110 10-116 (123)
21 cd03183 GST_C_Theta GST_C fami 99.5 1.6E-13 3.4E-18 90.2 8.7 80 20-108 39-120 (126)
22 cd03180 GST_C_2 GST_C family, 99.5 1.9E-13 4.1E-18 87.4 8.1 70 24-104 41-110 (110)
23 cd03187 GST_C_Phi GST_C family 99.5 2.1E-13 4.6E-18 88.3 8.3 79 21-108 40-118 (118)
24 cd03191 GST_C_Zeta GST_C famil 99.5 4.4E-13 9.6E-18 87.5 9.7 75 27-110 45-119 (121)
25 cd03206 GST_C_7 GST_C family, 99.5 2.6E-13 5.6E-18 86.0 8.0 73 21-104 28-100 (100)
26 PLN02817 glutathione dehydroge 99.5 7.8E-13 1.7E-17 97.7 11.6 89 28-121 173-262 (265)
27 cd03208 GST_C_Alpha GST_C fami 99.5 5.4E-13 1.2E-17 89.5 9.6 72 30-109 43-114 (137)
28 PF13410 GST_C_2: Glutathione 99.5 3.4E-13 7.5E-18 79.9 7.2 68 22-97 2-69 (69)
29 cd03189 GST_C_GTT1_like GST_C 99.5 2.8E-13 6.2E-18 88.0 7.5 66 26-102 54-119 (119)
30 PRK10542 glutathionine S-trans 99.5 2.4E-13 5.2E-18 95.8 7.4 93 6-109 103-196 (201)
31 cd03204 GST_C_GDAP1 GST_C fami 99.4 1.1E-12 2.3E-17 85.2 9.0 86 15-104 18-111 (111)
32 PLN02378 glutathione S-transfe 99.4 1.5E-12 3.3E-17 93.1 10.2 87 27-117 119-206 (213)
33 TIGR01262 maiA maleylacetoacet 99.4 1.3E-12 2.8E-17 92.7 9.2 75 27-110 130-204 (210)
34 PTZ00057 glutathione s-transfe 99.4 2.5E-12 5.5E-17 91.4 7.5 76 27-110 124-199 (205)
35 PRK13972 GSH-dependent disulfi 99.4 3.9E-12 8.5E-17 90.8 8.1 77 22-109 128-204 (215)
36 PRK11752 putative S-transferas 99.3 4.6E-12 1E-16 93.5 8.4 83 24-110 176-258 (264)
37 cd00299 GST_C_family Glutathio 99.3 2.8E-12 6E-17 80.0 6.1 88 3-98 7-100 (100)
38 PLN02473 glutathione S-transfe 99.3 3.3E-12 7.1E-17 91.0 6.9 78 24-109 133-210 (214)
39 cd03195 GST_C_4 GST_C family, 99.3 3.7E-12 8E-17 82.8 6.5 73 23-108 39-111 (114)
40 PLN02395 glutathione S-transfe 99.3 1.3E-11 2.8E-16 87.9 8.1 79 23-109 131-209 (215)
41 cd03179 GST_C_1 GST_C family, 99.3 5.8E-12 1.3E-16 79.9 5.6 68 21-99 38-105 (105)
42 PRK10357 putative glutathione 99.3 2.3E-11 5E-16 85.9 9.0 79 24-111 123-201 (202)
43 cd03202 GST_C_etherase_LigE GS 99.3 2.8E-11 6E-16 79.9 7.9 67 25-100 57-123 (124)
44 cd03194 GST_C_3 GST_C family, 99.2 5.1E-11 1.1E-15 77.5 8.1 72 26-108 41-112 (114)
45 COG0625 Gst Glutathione S-tran 99.2 4.4E-11 9.6E-16 85.1 7.8 74 21-105 126-199 (211)
46 cd03192 GST_C_Sigma_like GST_C 99.2 1.1E-10 2.4E-15 74.1 8.0 69 23-98 36-104 (104)
47 cd03193 GST_C_Metaxin GST_C fa 99.2 3.9E-11 8.6E-16 74.2 5.6 72 24-99 17-88 (88)
48 PF14497 GST_C_3: Glutathione 99.1 1.8E-10 3.9E-15 72.8 6.7 67 24-100 33-99 (99)
49 PRK10387 glutaredoxin 2; Provi 99.1 1E-10 2.3E-15 82.8 5.8 67 26-105 142-208 (210)
50 PRK15113 glutathione S-transfe 99.1 4.5E-10 9.8E-15 80.2 7.4 75 25-112 136-210 (214)
51 cd03200 GST_C_JTV1 GST_C famil 99.1 7.8E-10 1.7E-14 69.9 6.7 58 29-100 38-95 (96)
52 KOG4420 Uncharacterized conser 99.0 3.6E-09 7.9E-14 77.0 10.6 95 16-112 195-289 (325)
53 cd03205 GST_C_6 GST_C family, 99.0 3.2E-09 6.9E-14 66.9 7.5 68 20-98 31-98 (98)
54 KOG1422 Intracellular Cl- chan 98.9 8.3E-09 1.8E-13 72.9 8.6 111 6-120 103-215 (221)
55 cd03197 GST_C_mPGES2 GST_C fam 98.9 6.7E-09 1.5E-13 70.4 7.0 65 28-100 81-145 (149)
56 cd03211 GST_C_Metaxin2 GST_C f 98.9 6.3E-09 1.4E-13 68.9 6.0 70 25-99 56-126 (126)
57 cd03212 GST_C_Metaxin1_3 GST_C 98.9 1.5E-08 3.3E-13 68.0 7.5 72 24-100 62-134 (137)
58 TIGR02182 GRXB Glutaredoxin, G 98.8 5.1E-09 1.1E-13 74.7 4.5 66 26-105 141-207 (209)
59 KOG1695 Glutathione S-transfer 98.8 2E-08 4.4E-13 71.6 7.1 77 27-110 124-200 (206)
60 KOG0867 Glutathione S-transfer 98.7 7.3E-08 1.6E-12 69.7 8.3 82 20-109 127-208 (226)
61 COG0435 ECM4 Predicted glutath 98.6 3E-08 6.5E-13 72.9 3.0 98 6-109 185-285 (324)
62 KOG0868 Glutathione S-transfer 98.5 2.7E-07 5.8E-12 64.0 6.3 74 28-110 134-207 (217)
63 PLN02907 glutamate-tRNA ligase 98.5 2.4E-07 5.2E-12 76.9 7.0 66 30-103 94-159 (722)
64 KOG2903 Predicted glutathione 98.4 7.8E-08 1.7E-12 70.2 1.8 101 6-109 183-287 (319)
65 PF14834 GST_C_4: Glutathione 97.9 6.3E-05 1.4E-09 48.7 6.7 71 25-108 42-112 (117)
66 KOG4244 Failed axon connection 97.7 2.4E-05 5.2E-10 57.4 2.4 68 26-100 203-272 (281)
67 PF04399 Glutaredoxin2_C: Glut 97.6 0.00026 5.7E-09 47.2 5.6 66 26-104 59-124 (132)
68 cd03199 GST_C_GRX2 GST_C famil 97.4 0.00089 1.9E-08 44.4 6.7 65 27-104 61-125 (128)
69 KOG3029 Glutathione S-transfer 97.3 0.00066 1.4E-08 50.6 6.0 65 28-100 290-354 (370)
70 KOG3027 Mitochondrial outer me 96.7 0.0033 7.2E-08 44.9 4.7 70 24-100 175-247 (257)
71 KOG3028 Translocase of outer m 95.6 0.041 9E-07 41.5 5.9 70 26-100 163-233 (313)
72 COG2999 GrxB Glutaredoxin 2 [P 88.5 1.3 2.8E-05 31.2 4.8 64 27-104 143-207 (215)
73 KOG1147 Glutamyl-tRNA syntheta 83.6 2 4.3E-05 35.3 4.2 59 30-96 92-150 (712)
74 PF11801 Tom37_C: Tom37 C-term 83.5 5.3 0.00011 27.6 5.9 37 31-68 113-150 (168)
75 KOG1668 Elongation factor 1 be 60.8 11 0.00024 27.6 3.0 60 32-106 10-69 (231)
76 PF10414 CysG_dimeriser: Siroh 53.3 37 0.0008 18.9 3.9 31 92-122 4-35 (60)
77 PF01152 Bac_globin: Bacterial 40.6 85 0.0018 19.8 4.6 40 89-128 14-55 (120)
78 cd01068 sensor_globin Globin d 37.1 1E+02 0.0023 20.0 4.7 40 91-130 35-77 (147)
79 PHA02096 hypothetical protein 35.1 35 0.00076 20.8 1.9 39 2-43 16-54 (103)
80 KOG3478 Prefoldin subunit 6, K 34.5 92 0.002 20.2 3.8 23 21-43 64-86 (120)
81 PF08020 DUF1706: Protein of u 33.5 1.6E+02 0.0034 20.4 5.2 52 22-74 5-60 (166)
82 PF02646 RmuC: RmuC family; I 33.1 1.4E+02 0.0031 22.6 5.4 40 4-43 122-162 (304)
83 PF15652 Tox-SHH: HNH/Endo VII 32.2 33 0.00071 21.8 1.5 6 126-131 59-64 (100)
84 PF11563 Protoglobin: Protoglo 28.9 1.4E+02 0.003 19.5 4.4 41 90-130 36-79 (158)
85 TIGR02269 Myxococcus xanthus p 24.7 31 0.00066 24.6 0.5 43 86-131 131-173 (211)
86 PF10673 DUF2487: Protein of u 24.0 1.1E+02 0.0025 20.6 3.1 41 2-43 9-49 (142)
87 PRK14082 hypothetical protein; 21.6 1.8E+02 0.0039 16.9 4.4 33 7-39 17-50 (65)
88 cd08200 catalase_peroxidase_2 21.2 1.7E+02 0.0037 22.4 3.8 35 30-66 73-107 (297)
89 PRK15371 effector protein YopJ 20.7 1.9E+02 0.0041 22.0 4.0 38 27-69 24-61 (287)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=3.3e-19 Score=127.85 Aligned_cols=122 Identities=43% Similarity=0.660 Sum_probs=102.3
Q ss_pred CccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHH-HHHHHHHhhccc
Q 040120 2 AKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYL-GWVRVTEKMNEV 80 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~-~~~~~~~~~~~~ 80 (131)
+|+|++++.....++..+.++..+.+.+++.+.|..+|+.|.+ +++||+|+++|++|++++|++ .|........++
T Consensus 105 ~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k---~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~ 181 (231)
T KOG0406|consen 105 EYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGK---GKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGV 181 (231)
T ss_pred HHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhc---CCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCc
Confidence 5778877766666665556677788889999999999999984 678999999999999999877 455555555556
Q ss_pred ccCCCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHHHHHHHH
Q 040120 81 KLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAKLRA 126 (131)
Q Consensus 81 ~~~~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~~~~~ 126 (131)
+.++.+.+|.|.+|.+||.++|+|++++|+.+++++|++++++...
T Consensus 182 ~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 182 KFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred ccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 6666899999999999999999999999999999999999988643
No 2
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.80 E-value=1.3e-18 Score=114.35 Aligned_cols=114 Identities=54% Similarity=0.855 Sum_probs=90.5
Q ss_pred CccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccc
Q 040120 2 AKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVK 81 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~ 81 (131)
+|+++++.+++...+.. .++..+...+.+.+.++.||+.|. +++|++|+++|+||++++|++.|+.......+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~ 86 (126)
T cd03185 12 AFIDDKLFPAGRKVLAA-KGEEREKAKEEALEALKVLEEELG----GKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVK 86 (126)
T ss_pred HHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCcc
Confidence 46667787777666544 344555677889999999999997 5799999999999999999998876543333433
Q ss_pred cCCCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHH
Q 040120 82 LLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKV 120 (131)
Q Consensus 82 ~~~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 120 (131)
.++.+.+|+|.+|+++|.++|+++++++..+.+.+++++
T Consensus 87 ~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 87 LLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred ccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHHh
Confidence 223477999999999999999999999999888887764
No 3
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.79 E-value=5.3e-19 Score=116.51 Aligned_cols=113 Identities=26% Similarity=0.386 Sum_probs=91.0
Q ss_pred CccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccc
Q 040120 2 AKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVK 81 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~ 81 (131)
+|++ ++.++++.++.+ +++.++..+++.+.|+.+|+.|.++ +++|++|+++|+||++++|++.++.......+..
T Consensus 11 ~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~--~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~ 85 (124)
T cd03184 11 ERFS-KVVSAFYKLLGA--PSDREEKKAELRSALENLEEELTKR--GTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYE 85 (124)
T ss_pred HHHh-hhhHHHHHHHhc--cccchhhHHHHHHHHHHHHHHHHhc--CCCCcCCCCccHHHHHhhHHHHHHHHHHhhcccc
Confidence 3554 777888888875 5566778889999999999999742 3799999999999999999988776543221211
Q ss_pred cCCCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHH
Q 040120 82 LLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKV 120 (131)
Q Consensus 82 ~~~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 120 (131)
++.+.+|+|.+|+++|.++|+|+.++++.+.+.++++.
T Consensus 86 -~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 86 -FPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred -CCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 22478999999999999999999999999999998874
No 4
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.79 E-value=1.9e-18 Score=113.79 Aligned_cols=110 Identities=13% Similarity=0.228 Sum_probs=87.9
Q ss_pred cccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHH-Hhhccccc
Q 040120 4 SDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVT-EKMNEVKL 82 (131)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~-~~~~~~~~ 82 (131)
+++++++.++.++.+.++. ++..+++.+.|..||+.|.+ +++||+|+++|+||++++|++.++... ....++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~Le~~L~~---~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~ 84 (121)
T cd03201 10 VGSKIFSTFVGFLKSKDSN--DGTEQALLDELEALEDHLKE---NGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV 84 (121)
T ss_pred HHHHHHHHHHHHHHCCcHH--HHHHHHHHHHHHHHHHHHhc---CCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC
Confidence 3568889999999875543 55677899999999999973 268999999999999999988766532 22223322
Q ss_pred CCCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHH
Q 040120 83 LDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKV 120 (131)
Q Consensus 83 ~~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 120 (131)
.+.+|+|.+|++||.+||+|+++.+..+++.+.|++
T Consensus 85 --~~~~P~l~~w~~rl~~rps~~~t~~~~~~~~~~~~~ 120 (121)
T cd03201 85 --PESLTSVKSYMKALFSRESFVKTKAEKEDVIAGWAP 120 (121)
T ss_pred --cccchHHHHHHHHHHCCchhhhcCCCHHHHHHHhcc
Confidence 378999999999999999999999998888877753
No 5
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.77 E-value=1.2e-17 Score=111.52 Aligned_cols=113 Identities=15% Similarity=0.243 Sum_probs=90.4
Q ss_pred ccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccC------------CCCCcccCCCCChhHHHHHHHHHHHH
Q 040120 5 DVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCS------------KGKPFFGGSQIGFLDIAFGCYLGWVR 72 (131)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~------------~~~~f~~G~~~t~aDi~l~p~~~~~~ 72 (131)
.+++++.|...+++++++..+...+.+.+.|+.+|..|.+.. .+++|++|+++|+||+.++|.+.++.
T Consensus 8 ~~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~ 87 (134)
T cd03198 8 GEDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVK 87 (134)
T ss_pred HHHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 467889999999887777777788899999999999997410 02679999999999999999987775
Q ss_pred HHH-hhcccccCCCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHH
Q 040120 73 VTE-KMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAK 119 (131)
Q Consensus 73 ~~~-~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~ 119 (131)
... ...+..+ ++.+|+|.+|++||.+||+++++++..+.+..+|+
T Consensus 88 ~~~~~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 88 VVAKKYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HHHHhhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 321 1224433 47899999999999999999999998877776653
No 6
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.76 E-value=4.4e-18 Score=114.83 Aligned_cols=116 Identities=16% Similarity=0.153 Sum_probs=92.5
Q ss_pred CccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHH-hh--c
Q 040120 2 AKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTE-KM--N 78 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~-~~--~ 78 (131)
+|++.++.+.++.++...+++..+...+.+.+.|+.+|+.|+ +++|++|+++|+||++++|++.++.... .. .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~----~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~ 88 (142)
T cd03190 13 EWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLS----DRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKC 88 (142)
T ss_pred HHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHc----cCCeeeCCCccHHHHHHHHHHHHHHHHhhhhccc
Confidence 456677877777776665677777888899999999999997 6789999999999999999887653321 10 0
Q ss_pred ccccCCCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHHHHH
Q 040120 79 EVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAK 123 (131)
Q Consensus 79 ~~~~~~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~~ 123 (131)
+... .+.||+|.+|++||.++|+++++.++.+....|+++.++
T Consensus 89 ~~~~--~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 89 NLKR--IRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred ccch--hhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 1111 368999999999999999999999988888988888754
No 7
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.69 E-value=2e-16 Score=101.39 Aligned_cols=95 Identities=21% Similarity=0.335 Sum_probs=76.3
Q ss_pred CccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccc
Q 040120 2 AKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVK 81 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~ 81 (131)
+|+++++.+.+..+... .++..+...+.+.+.+..+|+.|+ +++|++|+++|+||++++|++.++.. .+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~ 82 (107)
T cd03186 12 HRIEQDWYPLVDTIEKG-RKKEAEKARKELRESLLALAPVFA----HKPYFMSEEFSLVDCALAPLLWRLPA----LGIE 82 (107)
T ss_pred HHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHc----CCCcccCCCCcHHHHHHHHHHHHHHH----cCCC
Confidence 56777888887766654 355566778889999999999998 67999999999999999998755432 2443
Q ss_pred cCCCCCCchHHHHHHHHhchhhhhhc
Q 040120 82 LLDEVKTPGLFKWAERFCADAAVKDV 107 (131)
Q Consensus 82 ~~~~~~~P~L~~w~~r~~~~p~v~~~ 107 (131)
+ .+.+|+|.+|+++|.+||+|+.+
T Consensus 83 ~--~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 83 L--PKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred C--cccchHHHHHHHHHHCCHHHHHh
Confidence 3 25799999999999999999875
No 8
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.66 E-value=3.2e-15 Score=108.67 Aligned_cols=113 Identities=16% Similarity=0.271 Sum_probs=87.5
Q ss_pred hhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhcc------------C--CCCCcccCCCCChhHHHHHHHHHHHHH
Q 040120 8 LFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKC------------S--KGKPFFGGSQIGFLDIAFGCYLGWVRV 73 (131)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~------------~--~~~~f~~G~~~t~aDi~l~p~~~~~~~ 73 (131)
+++.+..++.+..+...++..+++.+.++.||+.|.+. . .+++||+|+++|+||++++|++.++..
T Consensus 105 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~ 184 (236)
T TIGR00862 105 IFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKV 184 (236)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHH
Confidence 44444444444344445555667899999999998620 0 146899999999999999999988875
Q ss_pred H-HhhcccccCCCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHHHH
Q 040120 74 T-EKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLA 122 (131)
Q Consensus 74 ~-~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~ 122 (131)
. ..+.++++ ++.+|+|.+|+++|.++|+|+.++|+.+.+..+|...+
T Consensus 185 ~~~~~~~~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~ 232 (236)
T TIGR00862 185 VAKKYRNFDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVA 232 (236)
T ss_pred HHHHHhCcCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHh
Confidence 4 34556655 58999999999999999999999999999999988773
No 9
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.64 E-value=8.9e-16 Score=98.84 Aligned_cols=96 Identities=24% Similarity=0.313 Sum_probs=72.4
Q ss_pred CccccchhHHHHHhhccCC--------HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHH
Q 040120 2 AKSDVKLFPALKSIGSADG--------AEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRV 73 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~ 73 (131)
+|.++++.+.+..+..... ++..+...+.+.+.+..+|+.|+ +++|++|+++|+||++++|++.++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~----~~~~l~G~~~t~aDi~~~~~~~~~~~ 86 (114)
T cd03188 11 NFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLA----GGPYLLGDRFSVADAYLFVVLRWAPG 86 (114)
T ss_pred HHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeeCCCcchHHHHHHHHHHHHhh
Confidence 4666777776654443311 22234556788999999999997 67899999999999999998877643
Q ss_pred HHhhcccccCCCCCCchHHHHHHHHhchhhhhhcC
Q 040120 74 TEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVM 108 (131)
Q Consensus 74 ~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~~~ 108 (131)
. +. +.+++|+|.+|+++|.++|+|++++
T Consensus 87 ~----~~---~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 87 V----GL---DLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred c----CC---ChhhChHHHHHHHHHHhCHHhHhhC
Confidence 2 22 2368999999999999999998753
No 10
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.63 E-value=2.4e-15 Score=98.69 Aligned_cols=85 Identities=22% Similarity=0.410 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHH-HHhhcccccCCCCCCchHHHHHHHHhchhhhhhcC
Q 040120 30 QLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRV-TEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVM 108 (131)
Q Consensus 30 ~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~-~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~~~ 108 (131)
++.+.++.||+.|++. ++++|++| ++|+||++++|++.++.. .....+.++ .+++|+|.+|+++|.++|+|+++.
T Consensus 34 ~~~~~l~~Le~~L~~~-~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~~ 109 (120)
T cd03203 34 EAAAALDYIENALSKF-DDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQTK 109 (120)
T ss_pred HHHHHHHHHHHHHHhc-CCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhHc
Confidence 4456778888888631 13689999 999999999999877653 222335444 268999999999999999999999
Q ss_pred CChHHHHHHH
Q 040120 109 PETDKLAEFA 118 (131)
Q Consensus 109 ~~~~~~~~~~ 118 (131)
++.+++.+++
T Consensus 110 ~~~~~~~~~~ 119 (120)
T cd03203 110 QDPQELLDLA 119 (120)
T ss_pred CCHHHHHhhh
Confidence 9999998875
No 11
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.62 E-value=5.7e-15 Score=93.94 Aligned_cols=97 Identities=21% Similarity=0.230 Sum_probs=76.3
Q ss_pred CCccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhccc
Q 040120 1 MAKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEV 80 (131)
Q Consensus 1 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~ 80 (131)
|.|.++.+.+.+...+....++..+...+++.+.++.+|+.|+ +++|++|+++|+||+++++++.|+... +
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~----~~~~l~g~~~t~aDi~~~~~~~~~~~~----~- 75 (103)
T cd03207 5 LFFYAGVVEPALIAKAMGIEEPARMAGFGSYDDVLAALEQALA----KGPYLLGERFTAADVLVGSPLGWGLQF----G- 75 (103)
T ss_pred eeeccccccHHHHHHHcCCCcchhhhhhhhHHHHHHHHHHHHc----cCCcccCCccCHHHHHHHHHHHHHHHc----C-
Confidence 4567777777766554433334455667889999999999998 568999999999999999998887532 2
Q ss_pred ccCCCCCCchHHHHHHHHhchhhhhhcCC
Q 040120 81 KLLDEVKTPGLFKWAERFCADAAVKDVMP 109 (131)
Q Consensus 81 ~~~~~~~~P~L~~w~~r~~~~p~v~~~~~ 109 (131)
. .+.+|+|.+|+++|.++|+++.+..
T Consensus 76 -~--~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 76 -L--LPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred -C--CCCChHHHHHHHHHHcCHHHHHHhc
Confidence 1 2679999999999999999998763
No 12
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.58 E-value=1.2e-14 Score=94.68 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchh
Q 040120 23 AKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADA 102 (131)
Q Consensus 23 ~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p 102 (131)
+.+...+++.+.++.+|+.|+ +++|++|+++|+||++++|++.++.... ..+ ++.+.+|+|.+|+++|.++|
T Consensus 38 ~~~~~~~~i~~~l~~le~~L~----~~~yl~Gd~~tlADi~l~~~l~~~~~~~-~~~---~~~~~~P~L~~w~~r~~~rp 109 (115)
T cd03196 38 SEEEYRQQAEAFLKDLEARLQ----QHSYLLGDKPSLADWAIFPFVRQFAHVD-PKW---FDQSPYPRLRRWLNGFLASP 109 (115)
T ss_pred cHHHHHHHHHHHHHHHHHHHc----cCCccCCCCccHHHHHHHHHHHHHHHhh-hcc---cCcccCHHHHHHHHHHHcCh
Confidence 456677889999999999998 5689999999999999999887664321 111 22378999999999999999
Q ss_pred hhhhc
Q 040120 103 AVKDV 107 (131)
Q Consensus 103 ~v~~~ 107 (131)
+++++
T Consensus 110 a~~~~ 114 (115)
T cd03196 110 LFSKI 114 (115)
T ss_pred HHHhh
Confidence 99875
No 13
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.57 E-value=3.8e-14 Score=88.63 Aligned_cols=71 Identities=31% Similarity=0.438 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchh
Q 040120 23 AKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADA 102 (131)
Q Consensus 23 ~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p 102 (131)
.+++..+++.+.|+.+|+.|+ +++|++|+++|+||++++|++.|+..... ..+ .++||+|.+|++||.+||
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~----~~~~l~G~~~t~ADi~~~~~~~~~~~~~~----~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLK----GGPYLVGDKLTIADIALFPMLDWLERLGP----DFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----TSSSSSBSS-CHHHHHHHHHHHHHHHHTT----TTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHc----CCCeeeccCCchhHHHHHHHHHHHHHhCC----Ccc-cccCHHHHHHHHHHHcCC
Confidence 455667888999999999999 78999999999999999999988876532 111 278999999999999998
No 14
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.55 E-value=5.5e-14 Score=92.11 Aligned_cols=94 Identities=24% Similarity=0.294 Sum_probs=69.9
Q ss_pred hhHHHHHhhccCC-HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCC
Q 040120 8 LFPALKSIGSADG-AEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEV 86 (131)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~ 86 (131)
+...+..+....+ +...+...+.+.+.+..||+.|. +++|++|+++|+||+++++++.|+.... ... .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~T~aDi~l~~~~~~~~~~~----~~~--~~ 85 (121)
T cd03209 16 LRMGLARICYSPDFEKLKPDYLAKLPDKLKLFSDFLG----DRPWFAGDKITYVDFLLYEALDQHRIFE----PDC--LD 85 (121)
T ss_pred HHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhC----CCCCcCCCCccHHHHHHHHHHHHHHHhC----ccc--cc
Confidence 3334444433322 22344456778899999999997 5689999999999999999988875431 122 36
Q ss_pred CCchHHHHHHHHhchhhhhhcCCCh
Q 040120 87 KTPGLFKWAERFCADAAVKDVMPET 111 (131)
Q Consensus 87 ~~P~L~~w~~r~~~~p~v~~~~~~~ 111 (131)
.||+|.+|++||.++|+|++++...
T Consensus 86 ~~P~l~~~~~rv~~~p~vk~~~~~~ 110 (121)
T cd03209 86 AFPNLKDFLERFEALPKISAYMKSD 110 (121)
T ss_pred cChHHHHHHHHHHHCHHHHHHHhcc
Confidence 8999999999999999999987553
No 15
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.55 E-value=4.9e-14 Score=100.49 Aligned_cols=85 Identities=21% Similarity=0.285 Sum_probs=68.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHh
Q 040120 20 GAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFC 99 (131)
Q Consensus 20 ~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~ 99 (131)
+++..+...+.+.+.+..+|+.|. +++|++|+++|+||++++|++.++... +.++. .+.+|+|.+|++||.
T Consensus 121 ~~~~~~~~~~~l~~~l~~le~~L~----~~~~l~G~~~t~AD~~l~~~~~~~~~~----~~~~~-~~~~p~l~~w~~~~~ 191 (211)
T PRK09481 121 SASEADAARKQLREELLAIAPVFG----EKPYFMSEEFSLVDCYLAPLLWRLPVL----GIELS-GPGAKELKGYMTRVF 191 (211)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhc----cCCcccCCCccHHHHHHHHHHHHHHhc----CCCCC-CCCChhHHHHHHHHh
Confidence 344555667788899999999997 679999999999999999988666432 43332 357999999999999
Q ss_pred chhhhhhcCCChHH
Q 040120 100 ADAAVKDVMPETDK 113 (131)
Q Consensus 100 ~~p~v~~~~~~~~~ 113 (131)
+||+|++++.+.+.
T Consensus 192 ~rp~~~~~~~~~~~ 205 (211)
T PRK09481 192 ERDSFLASLTEAER 205 (211)
T ss_pred ccHHHHHHcCHHHH
Confidence 99999999876543
No 16
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.55 E-value=1.1e-14 Score=93.78 Aligned_cols=78 Identities=18% Similarity=0.269 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 21 AEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 21 ~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
++..+...+.+.+.|+.+|+.|+ +++|++|+++|+|||++++++.+.... +... .+.+|+|.+|+++|.+
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~ 104 (113)
T cd03178 35 PYAIERYTNEAKRLYGVLDKRLA----GRDYLAGDEYSIADIAIFPWVRRLEWI----GIDD--LDDFPNVKRWLDRIAA 104 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc----cCCcccCCCCCeeeeeHHHHHHHHHhc----cccc--hhhchHHHHHHHHHhh
Confidence 44455667888999999999997 678999999999999999988777433 2221 3789999999999999
Q ss_pred hhhhhhcC
Q 040120 101 DAAVKDVM 108 (131)
Q Consensus 101 ~p~v~~~~ 108 (131)
+|+++++.
T Consensus 105 ~p~~~~~~ 112 (113)
T cd03178 105 RPAVQRGL 112 (113)
T ss_pred CHHHHHhc
Confidence 99999864
No 17
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.55 E-value=3e-14 Score=92.31 Aligned_cols=93 Identities=16% Similarity=0.275 Sum_probs=70.5
Q ss_pred CccccchhHHHHHhhcc------------CCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHH
Q 040120 2 AKSDVKLFPALKSIGSA------------DGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLG 69 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~ 69 (131)
.|++.++++++...+.. .+++..++..+++.+.|..+|+.|+ +++|++|+++|+||+++++++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~----~~~~l~gd~~t~aDi~l~~~~~ 88 (117)
T cd03182 13 RRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLA----GSPYVAGDRFTIADITAFVGLD 88 (117)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhc----CCCcccCCCCCHHHHHHHHHhH
Confidence 45566776665544322 1233455677889999999999997 5689999999999999999988
Q ss_pred HHHHHHhhcccccCCCCCCchHHHHHHHHhchhhh
Q 040120 70 WVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAV 104 (131)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v 104 (131)
|+... +.++ ...+|+|.+|+++|.++|+|
T Consensus 89 ~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 89 FAKVV----KLRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHhc----CCCC--ccccHHHHHHHHHHHhccCC
Confidence 76532 3333 36899999999999999975
No 18
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.53 E-value=7.7e-14 Score=92.12 Aligned_cols=97 Identities=24% Similarity=0.196 Sum_probs=71.3
Q ss_pred chhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCC
Q 040120 7 KLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEV 86 (131)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~ 86 (131)
++...+...+....+..++...+.+.+.|..+|+.|.++. +++|++|+++|+||+++++++.|+.... + .. .+
T Consensus 16 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~-~~~~l~G~~~T~ADi~l~~~~~~~~~~~---~-~~--~~ 88 (126)
T cd03210 16 DLRLKYVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNN-GKGFIVGDKISFADYNLFDLLDIHLVLA---P-GC--LD 88 (126)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCCeeeCCCccHHHHHHHHHHHHHHHhC---h-Hh--hh
Confidence 4444444444432334455667778899999999997420 2489999999999999999988875321 1 12 37
Q ss_pred CCchHHHHHHHHhchhhhhhcCCC
Q 040120 87 KTPGLFKWAERFCADAAVKDVMPE 110 (131)
Q Consensus 87 ~~P~L~~w~~r~~~~p~v~~~~~~ 110 (131)
.+|+|.+|++||.++|+|++++..
T Consensus 89 ~~P~l~~~~~rv~~~p~v~~~~~~ 112 (126)
T cd03210 89 AFPLLKAFVERLSARPKLKAYLES 112 (126)
T ss_pred cChHHHHHHHHHHhCcHHHHHHhC
Confidence 899999999999999999997654
No 19
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.52 E-value=3.2e-14 Score=92.70 Aligned_cols=76 Identities=22% Similarity=0.349 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchh
Q 040120 23 AKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADA 102 (131)
Q Consensus 23 ~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p 102 (131)
..+...+++.+.++.+|+.|+ +++|++|+++|+||++++|++.|+... .+. +.+.+|+|.+|+++|.++|
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~s~aDi~l~~~~~~~~~~---~~~---~~~~~p~l~~w~~~~~~~p 104 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLE----GSDYVAGDQLTIADLSLVATVSTLEAL---LPL---DLSKYPNVRAWLERLKALP 104 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHc----cCCeeCCCCcCHHHHHHHHHHHHHHHh---cCC---ChhhCchHHHHHHHHHccc
Confidence 344567788999999999997 568999999999999999999887531 132 2367999999999999999
Q ss_pred hhhhcC
Q 040120 103 AVKDVM 108 (131)
Q Consensus 103 ~v~~~~ 108 (131)
++++..
T Consensus 105 ~~~~~~ 110 (118)
T cd03177 105 PYEEAN 110 (118)
T ss_pred chHHHH
Confidence 999865
No 20
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.51 E-value=7.5e-14 Score=91.17 Aligned_cols=101 Identities=21% Similarity=0.267 Sum_probs=75.3
Q ss_pred CccccchhHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHH
Q 040120 2 AKSDVKLFPALKSIGSA------DGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTE 75 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~ 75 (131)
.|+++++.+++..++.. .++...+...+.+.+.|+.+|+.|+ +++|++|+++|+||+++++++.|+....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~----~~~~l~G~~~siaDi~l~~~~~~~~~~~ 85 (123)
T cd03181 10 SFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLL----KRTYLVGERLTLADIFVAGALLLGFTYV 85 (123)
T ss_pred HHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHc----cCceeccCCccHHHHHHHHHHHHHHHHH
Confidence 46667777665433321 1234455667888999999999998 5789999999999999999988764321
Q ss_pred hhcccccCCCCCCchHHHHHHHHhchhhhhhcCCC
Q 040120 76 KMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPE 110 (131)
Q Consensus 76 ~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~~~~~ 110 (131)
. +... .+.+|+|.+|++++.++|+|++++++
T Consensus 86 ~--~~~~--~~~~p~l~~w~~~~~~~p~~~~~~~~ 116 (123)
T cd03181 86 F--DKEW--RAKYPNVTRWFNTVVNQPIFKAVFGE 116 (123)
T ss_pred c--CHHH--HHhChHHHHHHHHHHcCHHHHHHcCC
Confidence 1 1111 26799999999999999999998865
No 21
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.50 E-value=1.6e-13 Score=90.24 Aligned_cols=80 Identities=28% Similarity=0.415 Sum_probs=63.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHh
Q 040120 20 GAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFC 99 (131)
Q Consensus 20 ~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~ 99 (131)
+++..+...+.+.+.+..+|+.+.+ +++|++|+++|+||+++++.+.+.... +.+. .+++|+|.+|+++|.
T Consensus 39 ~~~~~~~~~~~~~~~l~~le~~l~~---~~~~l~Gd~~t~ADi~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~ 109 (126)
T cd03183 39 SPEKVKKAEENLEESLDLLENYFLK---DKPFLAGDEISIADLSAVCEIMQPEAA----GYDV--FEGRPKLAAWRKRVK 109 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc---CCCcccCCCCCHHHHHHHHHHHHHHhc----CCcc--cccCchHHHHHHHHH
Confidence 3455566778899999999997542 468999999999999999987666432 3322 378999999999999
Q ss_pred c--hhhhhhcC
Q 040120 100 A--DAAVKDVM 108 (131)
Q Consensus 100 ~--~p~v~~~~ 108 (131)
+ ||++++..
T Consensus 110 ~~~~p~~~~~~ 120 (126)
T cd03183 110 EAGNPLFDEAH 120 (126)
T ss_pred HhcchhHHHHH
Confidence 9 99998854
No 22
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.49 E-value=1.9e-13 Score=87.40 Aligned_cols=70 Identities=21% Similarity=0.434 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhh
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAA 103 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~ 103 (131)
.+...+++.+.|+.+|+.|. +++|++|+++|+||++++|++...... +. +.+++|+|.+|+++|.++|+
T Consensus 41 ~~~~~~~~~~~l~~lE~~L~----~~~~l~g~~~t~aDi~~~~~~~~~~~~----~~---~~~~~p~l~~~~~~~~~~p~ 109 (110)
T cd03180 41 IAASLAAWAKLMAILDAQLA----GRPYLAGDRFTLADIPLGCSAYRWFEL----PI---ERPPLPHLERWYARLRARPA 109 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCcccCCCCCHHHHHHHHHHHHHHHc----cc---ccccCchHHHHHHHHHhCCC
Confidence 44567789999999999998 578999999999999999987422211 21 24789999999999999997
Q ss_pred h
Q 040120 104 V 104 (131)
Q Consensus 104 v 104 (131)
|
T Consensus 110 ~ 110 (110)
T cd03180 110 F 110 (110)
T ss_pred C
Confidence 5
No 23
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.49 E-value=2.1e-13 Score=88.27 Aligned_cols=79 Identities=23% Similarity=0.281 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 21 AEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 21 ~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
++..+...+.+.+.++.+|+.|+ +++|++|+++|+||++++|++.++.... .+. . .+.+|+|.+|+++|.+
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~l~~~~~~~~~~~--~~~-~--~~~~p~l~~~~~~~~~ 110 (118)
T cd03187 40 EAVVEENEEKLKKVLDVYEARLS----KSKYLAGDSFTLADLSHLPYLQYLMATP--FAK-L--FDSRPHVKAWWEDISA 110 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc----cCcccCCCCccHHHHHHHHHHHHHHHcc--chh-h--hhcCchHHHHHHHHHh
Confidence 44455567889999999999998 6789999999999999999987764321 111 1 3679999999999999
Q ss_pred hhhhhhcC
Q 040120 101 DAAVKDVM 108 (131)
Q Consensus 101 ~p~v~~~~ 108 (131)
+|++++++
T Consensus 111 ~p~~~~~~ 118 (118)
T cd03187 111 RPAWKKVL 118 (118)
T ss_pred CHHHHhhC
Confidence 99998753
No 24
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.48 E-value=4.4e-13 Score=87.49 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhhh
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKD 106 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~ 106 (131)
..+.+.+.|..+|+.|+++ +++|++|+++|+|||+++|++.|+... +.+ .+.+|+|.+|+++|.++|++++
T Consensus 45 ~~~~~~~~l~~le~~L~~~--~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~~~ 115 (121)
T cd03191 45 YRHWIARGFAALEKLLAQT--AGKFCFGDEPTLADICLVPQVYNARRF----GVD---LSPYPTIARINEACLELPAFQA 115 (121)
T ss_pred HHHHHHHHHHHHHHHHHhc--CCCeecCCcCCHHHHHHHHHHHHHHHh----CCC---cccCcHHHHHHHHHHhChhHHH
Confidence 4466889999999999742 247999999999999999998776532 322 3789999999999999999999
Q ss_pred cCCC
Q 040120 107 VMPE 110 (131)
Q Consensus 107 ~~~~ 110 (131)
+.+.
T Consensus 116 ~~~~ 119 (121)
T cd03191 116 AHPD 119 (121)
T ss_pred hCcC
Confidence 8764
No 25
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.48 E-value=2.6e-13 Score=85.99 Aligned_cols=73 Identities=25% Similarity=0.355 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 21 AEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 21 ~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
+...+....++.+.++.+|+.|+ +++|++|+++|+||+++++++.+... .+ ++.+.+|+|.+|+++|.+
T Consensus 28 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~~ 96 (100)
T cd03206 28 PLDKETAIARAHRLLRLLEEHLA----GRDWLAGDRPTIADVAVYPYVALAPE----GG---VDLEDYPAIRRWLARIEA 96 (100)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHc----cCCccCCCCCCHHHHHHHHHHHHHhc----cC---CChhhCcHHHHHHHHHHh
Confidence 33555677889999999999998 56899999999999999998865432 12 123789999999999999
Q ss_pred hhhh
Q 040120 101 DAAV 104 (131)
Q Consensus 101 ~p~v 104 (131)
+|++
T Consensus 97 ~p~~ 100 (100)
T cd03206 97 LPGF 100 (100)
T ss_pred CcCC
Confidence 9975
No 26
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.48 E-value=7.8e-13 Score=97.73 Aligned_cols=89 Identities=12% Similarity=0.185 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHH-HhhcccccCCCCCCchHHHHHHHHhchhhhhh
Q 040120 28 IEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVT-EKMNEVKLLDEVKTPGLFKWAERFCADAAVKD 106 (131)
Q Consensus 28 ~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~-~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~ 106 (131)
.+++.+.+..+|+.|++ +++|++|+++|+||++++|.+.++... ....++++ .+.+|+|.+|+++|.++|+++.
T Consensus 173 ~~~l~~~l~~LE~~L~~---~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~ 247 (265)
T PLN02817 173 EQALLDELTSFDDYIKE---NGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSV--PDSLPFVKSYMKNIFSMESFVK 247 (265)
T ss_pred HHHHHHHHHHHHHHHhc---CCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--cccCHHHHHHHHHHhcchhHhh
Confidence 35677889999999974 368999999999999999998776432 12223333 3789999999999999999999
Q ss_pred cCCChHHHHHHHHHH
Q 040120 107 VMPETDKLAEFAKVL 121 (131)
Q Consensus 107 ~~~~~~~~~~~~~~~ 121 (131)
+.+..+.+.+.|...
T Consensus 248 ~~~~~~~~~~~~~~~ 262 (265)
T PLN02817 248 TRALPEDVIAGWRPK 262 (265)
T ss_pred cCCCHHHHHHHhHhh
Confidence 999887777777643
No 27
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.47 E-value=5.4e-13 Score=89.52 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhhhcCC
Q 040120 30 QLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMP 109 (131)
Q Consensus 30 ~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~~~~ 109 (131)
.+...|..+|+.|..+ +++|++|+++|+||+++++++.|+.... ... .+.||+|.+|++||.++|+|++++.
T Consensus 43 ~~~~~l~~lE~~L~~~--~~~~l~G~~~T~ADi~l~~~l~~~~~~~----~~~--l~~~P~l~~~~~rv~~~P~vk~~~~ 114 (137)
T cd03208 43 AKNRYFPVFEKVLKSH--GQDFLVGNKLSRADIHLLEAILMVEELD----PSL--LSDFPLLQAFKTRISNLPTIKKFLQ 114 (137)
T ss_pred HHHHHHHHHHHHHHhC--CCCeeeCCCCCHHHHHHHHHHHHHHHhc----hhh--hccChHHHHHHHHHHcCHHHHHHHh
Confidence 4568999999999743 4689999999999999999988875431 112 3789999999999999999998654
No 28
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.46 E-value=3.4e-13 Score=79.88 Aligned_cols=68 Identities=34% Similarity=0.430 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHH
Q 040120 22 EAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAER 97 (131)
Q Consensus 22 ~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r 97 (131)
+..++..+++.+.++.+|+.|. +++|++|+++|+||++++|++.++..... +..+ .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~----~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLA----DGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----TSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----hCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCc--cccCHHHHHHHhC
Confidence 4567788999999999999998 56799999999999999999988876532 2222 3789999999987
No 29
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.46 E-value=2.8e-13 Score=88.01 Aligned_cols=66 Identities=24% Similarity=0.220 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchh
Q 040120 26 AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADA 102 (131)
Q Consensus 26 ~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p 102 (131)
...+++.+.|+.+|+.|. +++|++|+++|+||+++++++.|+... +. +.+.+|+|.+|+++|.++|
T Consensus 54 ~~~~~~~~~l~~le~~L~----~~~~l~Gd~~t~ADi~l~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 54 FINPELKKHLDFLEDRLA----KKGYFVGDKLTAADIMMSFPLEAALAR----GP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHhHHHHHHHHHHHHHHc----cCCCCCCCCCCHHHHHHHHHHHHHHHc----Cc---ccccCchHHHHHHHHhcCC
Confidence 445678999999999998 678999999999999999988877432 22 2478999999999999986
No 30
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.46 E-value=2.4e-13 Score=95.81 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=68.5
Q ss_pred cchhHHHHHhhccCCHHH-HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCC
Q 040120 6 VKLFPALKSIGSADGAEA-KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLD 84 (131)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~ 84 (131)
+++.+.+..++....++. .+...+.+.+.+..+|+.|. +++|++|+++|+||++++|++.|+... +. +
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~s~ADi~l~~~~~~~~~~----~~---~ 171 (201)
T PRK10542 103 TELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALA----DEQWICGQRFTIADAYLFTVLRWAYAV----KL---N 171 (201)
T ss_pred hhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhc----CCCeeeCCCCcHHhHHHHHHHHHhhcc----CC---C
Confidence 344444434333222222 33456778899999999997 568999999999999999988776432 32 2
Q ss_pred CCCCchHHHHHHHHhchhhhhhcCC
Q 040120 85 EVKTPGLFKWAERFCADAAVKDVMP 109 (131)
Q Consensus 85 ~~~~P~L~~w~~r~~~~p~v~~~~~ 109 (131)
.+.+|+|.+|+++|.++|+|++++.
T Consensus 172 ~~~~p~l~~w~~~~~~~p~~k~~~~ 196 (201)
T PRK10542 172 LEGLEHIAAYMQRVAERPAVAAALK 196 (201)
T ss_pred cccchHHHHHHHHHHcCHHHHHHHH
Confidence 3689999999999999999998764
No 31
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.44 E-value=1.1e-12 Score=85.15 Aligned_cols=86 Identities=19% Similarity=0.234 Sum_probs=64.2
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHhhccC------CCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccC--CCC
Q 040120 15 IGSADGAEAKEAAIEQLIEGLVLLEDAFVKCS------KGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLL--DEV 86 (131)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~------~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~--~~~ 86 (131)
++.+.+.+..+...+++...+..||..|.++. ++++|++|+++|+||+++++++.|+... +.+.. ...
T Consensus 18 ~~~~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~ 93 (111)
T cd03204 18 LLDHDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNG 93 (111)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----Cccccccccc
Confidence 34343455567778899999999999997421 0126999999999999999999887643 22210 025
Q ss_pred CCchHHHHHHHHhchhhh
Q 040120 87 KTPGLFKWAERFCADAAV 104 (131)
Q Consensus 87 ~~P~L~~w~~r~~~~p~v 104 (131)
.||+|.+|++||.+||+|
T Consensus 94 ~~P~l~~w~~rv~aRpsf 111 (111)
T cd03204 94 KRPNLEAYFERVLQRESF 111 (111)
T ss_pred cChHHHHHHHHHHcCCCC
Confidence 799999999999999975
No 32
>PLN02378 glutathione S-transferase DHAR1
Probab=99.43 E-value=1.5e-12 Score=93.08 Aligned_cols=87 Identities=14% Similarity=0.225 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHH-HhhcccccCCCCCCchHHHHHHHHhchhhhh
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVT-EKMNEVKLLDEVKTPGLFKWAERFCADAAVK 105 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~-~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~ 105 (131)
..+.+.+.|..+|+.|..+ +++|++|+++|+||++++|++.++... ....+.+. .+.||+|.+|+++|.+||+++
T Consensus 119 ~~~~~~~~l~~le~~L~~~--~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~ 194 (213)
T PLN02378 119 SEHALLVELEALENHLKSH--DGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSV--PESFPHVHNYMKTLFSLDSFE 194 (213)
T ss_pred HHHHHHHHHHHHHHHHhcC--CCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCc--hhHhHHHHHHHHHHhcCCCee
Confidence 3467778899999999743 468999999999999999998776432 11222222 368999999999999999999
Q ss_pred hcCCChHHHHHH
Q 040120 106 DVMPETDKLAEF 117 (131)
Q Consensus 106 ~~~~~~~~~~~~ 117 (131)
++++.+......
T Consensus 195 ~~~~~~~~~~~~ 206 (213)
T PLN02378 195 KTKTEEKYVISG 206 (213)
T ss_pred cccCChHHHHHH
Confidence 998876555443
No 33
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.42 E-value=1.3e-12 Score=92.66 Aligned_cols=75 Identities=20% Similarity=0.154 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhhh
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKD 106 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~ 106 (131)
..+.+.+.|..+|+.|+++ +++|++|+++|+||+++++++.++... +. +.++||+|.+|+++|.+||++++
T Consensus 130 ~~~~~~~~l~~le~~L~~~--~~~~l~G~~~T~ADi~~~~~l~~~~~~----~~---~~~~~p~l~~~~~~~~~rp~~~~ 200 (210)
T TIGR01262 130 YQHWISKGFAALEALLQPH--AGAFCVGDTPTLADLCLVPQVYNAERF----GV---DLTPYPTLRRIAAALAALPAFQR 200 (210)
T ss_pred HHHHHHHHHHHHHHHHhcC--CCCEeeCCCCCHHHHHHHHHHHHHHHc----CC---CcccchHHHHHHHHHhcCHHHHH
Confidence 4566889999999999843 357999999999999999998776432 22 23789999999999999999999
Q ss_pred cCCC
Q 040120 107 VMPE 110 (131)
Q Consensus 107 ~~~~ 110 (131)
+.++
T Consensus 201 ~~~~ 204 (210)
T TIGR01262 201 AHPE 204 (210)
T ss_pred hCcc
Confidence 8865
No 34
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.36 E-value=2.5e-12 Score=91.36 Aligned_cols=76 Identities=16% Similarity=0.103 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhhh
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKD 106 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~ 106 (131)
..+.+.+.+..+|+.|+++ +++|++|+++|+||+++++++.++... .+. +.+.||+|.+|++||.++|++++
T Consensus 124 ~~~~~~~~l~~le~~L~~~--~~~~l~Gd~~T~AD~~l~~~~~~~~~~---~~~---~l~~~P~l~~~~~r~~~~P~~k~ 195 (205)
T PTZ00057 124 LNEELPKWSGYFENILKKN--HCNYFVGDNLTYADLAVFNLYDDIETK---YPN---SLKNFPLLKAHNEFISNLPNIKN 195 (205)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCeeeCCcccHHHHHHHHHHHHHHHh---Chh---hhccChhHHHHHHHHHhChHHHH
Confidence 4567889999999999753 458999999999999999988776421 122 23789999999999999999999
Q ss_pred cCCC
Q 040120 107 VMPE 110 (131)
Q Consensus 107 ~~~~ 110 (131)
++.+
T Consensus 196 y~~~ 199 (205)
T PTZ00057 196 YISN 199 (205)
T ss_pred HHHh
Confidence 7643
No 35
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.35 E-value=3.9e-12 Score=90.80 Aligned_cols=77 Identities=19% Similarity=0.245 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhch
Q 040120 22 EAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCAD 101 (131)
Q Consensus 22 ~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~ 101 (131)
...+...+.+.+.+..+|+.|. +++|++|+++|+||++++|++...... +. +.+.||+|.+|++||.+|
T Consensus 128 ~~~~~~~~~~~~~l~~le~~L~----~~~~l~Gd~~t~ADi~l~~~~~~~~~~----~~---~~~~~P~l~~w~~r~~~r 196 (215)
T PRK13972 128 YAIERYQVETQRLYHVLNKRLE----NSPWLGGENYSIADIACWPWVNAWTRQ----RI---DLAMYPAVKNWHERIRSR 196 (215)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc----cCccccCCCCCHHHHHHHHHHHHHhhc----CC---cchhCHHHHHHHHHHHhC
Confidence 3344456678899999999997 568999999999999999876332211 22 237899999999999999
Q ss_pred hhhhhcCC
Q 040120 102 AAVKDVMP 109 (131)
Q Consensus 102 p~v~~~~~ 109 (131)
|+|++++.
T Consensus 197 p~~~~~~~ 204 (215)
T PRK13972 197 PATGQALL 204 (215)
T ss_pred HHHHHHHH
Confidence 99998764
No 36
>PRK11752 putative S-transferase; Provisional
Probab=99.35 E-value=4.6e-12 Score=93.49 Aligned_cols=83 Identities=17% Similarity=0.215 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhh
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAA 103 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~ 103 (131)
.+...+++.+.|+.+|+.|. +++||+|+++|+||++++|++.++.....+.....++.+.||+|.+|+++|.+||+
T Consensus 176 ~~~~~~~~~~~L~~le~~L~----~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs 251 (264)
T PRK11752 176 INRFTMEAKRQLDVLDKQLA----EHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPA 251 (264)
T ss_pred HHHHHHHHHHHHHHHHHHhc----cCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHH
Confidence 34455678899999999997 56899999999999999998876643211111111234789999999999999999
Q ss_pred hhhcCCC
Q 040120 104 VKDVMPE 110 (131)
Q Consensus 104 v~~~~~~ 110 (131)
|++++..
T Consensus 252 ~k~~~~~ 258 (264)
T PRK11752 252 VKRGRIV 258 (264)
T ss_pred HHHHHhc
Confidence 9987643
No 37
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.34 E-value=2.8e-12 Score=80.04 Aligned_cols=88 Identities=27% Similarity=0.399 Sum_probs=64.1
Q ss_pred ccccchhHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHh
Q 040120 3 KSDVKLFPALKSIGSA------DGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEK 76 (131)
Q Consensus 3 f~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~ 76 (131)
|++..+.+.+...... ..++..+...+.+.+.++.||+.|+ +++|++|+++|+||++++|++.|+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~g~~~t~aDi~~~~~l~~~~~~~~ 82 (100)
T cd00299 7 WADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLA----GRPYLAGDRFSLADIALAPVLARLDLLGP 82 (100)
T ss_pred HHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHc----cCCCCCCCCcCHHHHHHHHHHHHHHHhhh
Confidence 4445454444443332 1245566678889999999999998 56899999999999999999988865432
Q ss_pred hcccccCCCCCCchHHHHHHHH
Q 040120 77 MNEVKLLDEVKTPGLFKWAERF 98 (131)
Q Consensus 77 ~~~~~~~~~~~~P~L~~w~~r~ 98 (131)
..+ . .+.+|+|.+|+++|
T Consensus 83 ~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 83 LLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred hhh--h--hccCccHHHHHHhC
Confidence 111 1 37799999999985
No 38
>PLN02473 glutathione S-transferase
Probab=99.34 E-value=3.3e-12 Score=90.98 Aligned_cols=78 Identities=17% Similarity=0.264 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhh
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAA 103 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~ 103 (131)
.++..+++...++.+|+.|+ +++|++|+++|+||++++|.+.|+....... .+ .+++|+|.+|++||.++|+
T Consensus 133 ~~~~~~~~~~~l~~le~~L~----~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~--~~--~~~~P~l~~w~~~~~~~p~ 204 (214)
T PLN02473 133 VEELKVKFDKVLDVYENRLA----TNRYLGGDEFTLADLTHMPGMRYIMNETSLS--GL--VTSRENLNRWWNEISARPA 204 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhc----cCCcccCCCCCHHHHHHHHHHHHHHhccccH--HH--HhcCHHHHHHHHHHhcChh
Confidence 44456778899999999997 5689999999999999999887764321111 12 2789999999999999999
Q ss_pred hhhcCC
Q 040120 104 VKDVMP 109 (131)
Q Consensus 104 v~~~~~ 109 (131)
++++..
T Consensus 205 ~~~~~~ 210 (214)
T PLN02473 205 WKKLME 210 (214)
T ss_pred hHHHHH
Confidence 998753
No 39
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.34 E-value=3.7e-12 Score=82.80 Aligned_cols=73 Identities=16% Similarity=0.123 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchh
Q 040120 23 AKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADA 102 (131)
Q Consensus 23 ~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p 102 (131)
..+...+.+.+.+..+|..+.+ +++|++| ++|+||+++++++.|+... |.++ + |++.+|.+||.+||
T Consensus 39 ~~~~~~~~~~~~~~~le~~l~~---~~~~l~G-~fSiAD~~l~~~~~~~~~~----g~~l---~--p~l~ay~~r~~~rP 105 (114)
T cd03195 39 LSEAAQAAAEKLIAVAEALLPP---GAANLFG-EWCIADTDLALMLNRLVLN----GDPV---P--ERLRDYARRQWQRP 105 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHhc---CCCcccC-CccHHHHHHHHHHHHHHHc----CCCC---C--HHHHHHHHHHHCCH
Confidence 3455677788899999988862 4589999 5999999999999888654 5433 3 99999999999999
Q ss_pred hhhhcC
Q 040120 103 AVKDVM 108 (131)
Q Consensus 103 ~v~~~~ 108 (131)
+|++..
T Consensus 106 a~~~~~ 111 (114)
T cd03195 106 SVQAWL 111 (114)
T ss_pred HHHHHH
Confidence 999865
No 40
>PLN02395 glutathione S-transferase
Probab=99.30 E-value=1.3e-11 Score=87.87 Aligned_cols=79 Identities=14% Similarity=0.209 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchh
Q 040120 23 AKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADA 102 (131)
Q Consensus 23 ~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p 102 (131)
..+...+.+.+.++.+|+.|+ +++|++|+++|+||++++|++.++... ..... ..+.+|+|.+|+++|.++|
T Consensus 131 ~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~s~ADi~l~~~~~~~~~~--~~~~~--~~~~~p~L~~w~~~~~~rp 202 (215)
T PLN02395 131 VIKESEEKLAKVLDVYEARLS----KSKYLAGDFVSLADLAHLPFTEYLVGP--IGKAY--LIKDRKHVSAWWDDISSRP 202 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCccccCCCcCHHHHHHHHHHHHHhcc--cchhh--hhccCchHHHHHHHHHcCh
Confidence 344566778899999999997 568999999999999999987665311 11111 1367999999999999999
Q ss_pred hhhhcCC
Q 040120 103 AVKDVMP 109 (131)
Q Consensus 103 ~v~~~~~ 109 (131)
++++++.
T Consensus 203 ~~k~~~~ 209 (215)
T PLN02395 203 AWKEVLA 209 (215)
T ss_pred HHHHHHH
Confidence 9998764
No 41
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=5.8e-12 Score=79.86 Aligned_cols=68 Identities=25% Similarity=0.347 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHh
Q 040120 21 AEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFC 99 (131)
Q Consensus 21 ~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~ 99 (131)
++..+...+++.+.++.+|+.|+ +++|++|+++|+||++++|++.|+... +. +.+++|+|.+|++++.
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~g~~~slaDi~~~~~~~~~~~~----~~---~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVLEAHLA----GRDFLVGDALTIADIALAAYTHVADEG----GF---DLADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----cCccccCCCCCHHHHHHHHHHHhcccc----CC---ChHhCccHHHHHHhhC
Confidence 44455677889999999999997 568999999999999999998876432 22 2477999999999873
No 42
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.29 E-value=2.3e-11 Score=85.90 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhh
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAA 103 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~ 103 (131)
.+...+.+...|+.||+.|. +++ ++|+++|+||+++++.+.|+.... . +... .+.+|+|.+|++||.+||+
T Consensus 123 ~~~~~~~l~~~l~~le~~L~----~~~-l~Gd~~t~ADi~l~~~l~~~~~~~-~-~~~~--~~~~p~l~~~~~~i~~rp~ 193 (202)
T PRK10357 123 LLRQREKINRSLDALEGYLV----DGT-LKTDTVNLATIAIACAVGYLNFRR-V-APGW--CVDRPHLVKLVENLFQRES 193 (202)
T ss_pred HHHHHHHHHHHHHHHHHhhc----cCc-ccCCCcCHHHHHHHHHHHHHHhcc-c-Ccch--hhcChHHHHHHHHHhcChh
Confidence 34556788999999999997 456 999999999999999988774321 1 1111 2579999999999999999
Q ss_pred hhhcCCCh
Q 040120 104 VKDVMPET 111 (131)
Q Consensus 104 v~~~~~~~ 111 (131)
++++.|+.
T Consensus 194 ~~~~~~~~ 201 (202)
T PRK10357 194 FARTEPPK 201 (202)
T ss_pred hhhcCCCC
Confidence 99998863
No 43
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.27 E-value=2.8e-11 Score=79.85 Aligned_cols=67 Identities=25% Similarity=0.476 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 25 EAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 25 ~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
+...+.+.+.++.+|+.|+ +++|++|+++|+||+++++++.|+... .+.++ .+.+|+|.+|++||.+
T Consensus 57 ~~~~~~~~~~l~~l~~~L~----~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~--~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 57 EAALANFRAALEPLRATLK----GQPFLGGAAPNYADYIVFGGFQWARIV---SPFPL--LEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHHHHHHc----CCCccCCCCCchhHHHHHHHHHHHHHc---Ccccc--cccCChHHHHHHHHhc
Confidence 3456778899999999998 678999999999999999988777542 13333 3789999999999976
No 44
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=5.1e-11 Score=77.47 Aligned_cols=72 Identities=15% Similarity=0.279 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhh
Q 040120 26 AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVK 105 (131)
Q Consensus 26 ~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~ 105 (131)
...+.+.+.+..+|..+.... +++|++|+ +|+||+++++++.|+... +.+ ..|+|.+|++||.++|+|+
T Consensus 41 ~~~~~~~~~~~~le~~l~~~~-~~~yl~Gd-~T~ADi~l~~~~~~~~~~----~~~-----~~P~l~~~~~rv~~rPsv~ 109 (114)
T cd03194 41 AVQADIARIEAIWAECLARFQ-GGPFLFGD-FSIADAFFAPVVTRFRTY----GLP-----LSPAAQAYVDALLAHPAMQ 109 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CCCCCCCC-CcHHHHHHHHHHHHHHHc----CCC-----CCHHHHHHHHHHHCCHHHH
Confidence 344555666666666664221 46899999 999999999998887432 322 2399999999999999999
Q ss_pred hcC
Q 040120 106 DVM 108 (131)
Q Consensus 106 ~~~ 108 (131)
+++
T Consensus 110 ~~~ 112 (114)
T cd03194 110 EWI 112 (114)
T ss_pred HHH
Confidence 865
No 45
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=4.4e-11 Score=85.08 Aligned_cols=74 Identities=28% Similarity=0.374 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 21 AEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 21 ~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
++..+...+.+...+..+|..|+ +++|++|+++|+||+++++.+.++... +.. .+.+|+|.+|++||.+
T Consensus 126 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~tiAD~~~~~~~~~~~~~----~~~---~~~~p~l~~w~~r~~~ 194 (211)
T COG0625 126 EAALEAARAEIRALLALLEALLA----DGPYLAGDRFTIADIALAPLLWRLALL----GEE---LADYPALKAWYERVLA 194 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----cCCcccCCCCCHHHHHHHHHHHHhhhc----Ccc---cccChHHHHHHHHHHc
Confidence 34455667888999999999998 679999999999999999988875433 221 2679999999999999
Q ss_pred hhhhh
Q 040120 101 DAAVK 105 (131)
Q Consensus 101 ~p~v~ 105 (131)
+|+++
T Consensus 195 rp~~~ 199 (211)
T COG0625 195 RPAFR 199 (211)
T ss_pred CCchh
Confidence 99954
No 46
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.20 E-value=1.1e-10 Score=74.08 Aligned_cols=69 Identities=26% Similarity=0.270 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHH
Q 040120 23 AKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERF 98 (131)
Q Consensus 23 ~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~ 98 (131)
..+...+.+.+.+..+|+.|.++ +++|++|+++|+||+++++++.++... +.... .+.+|+|.+|++++
T Consensus 36 ~~~~~~~~~~~~l~~le~~l~~~--~~~~~~G~~~s~aDi~l~~~~~~~~~~----~~~~~-~~~~p~l~~~~~~~ 104 (104)
T cd03192 36 KKEFLKEAIPKYLKKLEKILKEN--GGGYLVGDKLTWADLVVFDVLDYLLYL----DPKLL-LKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHc--CCCeeeCCCccHHHHHHHHHHHHHHhh----Cchhh-HHhChhHHHHHHhC
Confidence 34455677889999999999731 268999999999999999999887543 21110 36799999999985
No 47
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.20 E-value=3.9e-11 Score=74.24 Aligned_cols=72 Identities=22% Similarity=0.154 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHh
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFC 99 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~ 99 (131)
+.+..+++.+.++.+|+.|+ +++|++|+++|+||+++++++.++.......+....+.+.+|+|.+|++||.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~----~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLG----DKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 34567788999999999998 6789999999999999999987764321000000001267999999999974
No 48
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.14 E-value=1.8e-10 Score=72.81 Aligned_cols=67 Identities=27% Similarity=0.411 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
.+...+++.+.+..+++.|+.+ +++|++|++||+||+++++.+..+.. . .+ ++.+|+|.+|++||.+
T Consensus 33 ~~~~~~~~~~~l~~l~~~L~~~--~~~~l~G~~~T~AD~~v~~~l~~~~~-----~-~~--~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 33 GDFSREELPKALKILEKHLAER--GGDFLVGDKPTLADIAVFGFLASLRW-----A-DF--PKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--SSSSSSSSS--HHHHHHHHHHHHHHC-----C-HH--TTTCHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHHHHHHHcC--CCeeecCCCCCHHHHHHHHHHHHHhh-----c-cc--ccccHHHHHHHHhhcC
Confidence 3445678899999999999865 34499999999999999987643321 1 12 2589999999999974
No 49
>PRK10387 glutaredoxin 2; Provisional
Probab=99.13 E-value=1e-10 Score=82.83 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhh
Q 040120 26 AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVK 105 (131)
Q Consensus 26 ~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~ 105 (131)
+..+++.+.|+.+|+.|. + +|++|+++|+||+++++++.|+... .+ + +.+|+|.+|++||.+||++.
T Consensus 142 ~~~~~~~~~l~~le~~L~----~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~---~--~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 142 GLIKEINADLRALDPLIV----K-PNAVNGELSTDDIHLFPILRNLTLV---KG---I--EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHHhc----C-ccccCCCCCHHHHHHHHHHhcceee---cC---C--CCCHHHHHHHHHHHHHhCCC
Confidence 456788899999999887 5 8999999999999999998877532 12 2 34699999999999999874
No 50
>PRK15113 glutathione S-transferase; Provisional
Probab=99.08 E-value=4.5e-10 Score=80.21 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhh
Q 040120 25 EAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAV 104 (131)
Q Consensus 25 ~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v 104 (131)
+...+.+.+.+..+|+.|+. +++|++|+ +|+||+++++++.|+... +..+ .|+|.+|++||.+||+|
T Consensus 136 ~~~~~~~~~~l~~le~~L~~---~~~~l~G~-~TlADi~l~~~l~~~~~~----~~~~-----~p~l~~~~~r~~~rp~~ 202 (214)
T PRK15113 136 EAGKAAAEKLFAVAERLLAP---GQPNLFGE-WCIADTDLALMLNRLVLH----GDEV-----PERLADYATFQWQRASV 202 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhc---CCCEeeCC-ccHHHHHHHHHHHHHHHc----CCCC-----CHHHHHHHHHHhcCHHH
Confidence 44567788999999999973 34799996 999999999998776432 3221 29999999999999999
Q ss_pred hhcCCChH
Q 040120 105 KDVMPETD 112 (131)
Q Consensus 105 ~~~~~~~~ 112 (131)
++++...+
T Consensus 203 ~~~~~~~~ 210 (214)
T PRK15113 203 QRWLALSA 210 (214)
T ss_pred HHHHHHhh
Confidence 99875543
No 51
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.05 E-value=7.8e-10 Score=69.89 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 29 EQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 29 ~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
+++.+.++.+|+.|. +++|++|+++|+||+++++.+.+. +. +.+.+|+|.+|++||.+
T Consensus 38 ~~~~~~l~~le~~L~----~~~fl~Gd~~tiADi~l~~~l~~~-------~~---~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALG----RSPWLVGSEFTVADIVSWCALLQT-------GL---ASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHc----CCCccCCCCCCHHHHHHHHHHHHc-------cc---ccccChHHHHHHHHHHh
Confidence 345578889999998 578999999999999999876432 21 23679999999999976
No 52
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.04 E-value=3.6e-09 Score=77.04 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=71.5
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHH
Q 040120 16 GSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWA 95 (131)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~ 95 (131)
..+.++....+...++...|..+|..|..+....+|++|+.+|+|||.+++.+.++..+.-... ...--+.|+|..++
T Consensus 195 ~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~--yw~~gsrpnle~Yf 272 (325)
T KOG4420|consen 195 LEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKK--YWEDGSRPNLESYF 272 (325)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHH--hcccCCCccHHHHH
Confidence 3344555556667778888999999997432236899999999999999999999877632111 12124689999999
Q ss_pred HHHhchhhhhhcCCChH
Q 040120 96 ERFCADAAVKDVMPETD 112 (131)
Q Consensus 96 ~r~~~~p~v~~~~~~~~ 112 (131)
+|++.|+++.+.+++.-
T Consensus 273 ~rvrrR~sf~kvlg~~f 289 (325)
T KOG4420|consen 273 ERVRRRFSFRKVLGDIF 289 (325)
T ss_pred HHHHhhhHHHHhhhhHH
Confidence 99999999999987643
No 53
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.98 E-value=3.2e-09 Score=66.93 Aligned_cols=68 Identities=24% Similarity=0.440 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHH
Q 040120 20 GAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERF 98 (131)
Q Consensus 20 ~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~ 98 (131)
+++..+...+.+.+.|..+|+.|+ +++| +++|+||+++++.+.|+.... .+... .+.+|+|.+|++||
T Consensus 31 ~~~~~~~~~~~~~~~l~~le~~L~----~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 31 SQPWLERQRGKIERALDALEAELA----KLPL---DPLDLADIAVACALGYLDFRH--PDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhh----hCCC---CCCCHHHHHHHHHHHHHHhHc--cCcch--hhhChHHHHHHHhC
Confidence 344556677889999999999997 5677 999999999999998885421 12211 37899999999986
No 54
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=98.93 E-value=8.3e-09 Score=72.91 Aligned_cols=111 Identities=13% Similarity=0.259 Sum_probs=85.2
Q ss_pred cchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCcccCCCCChhHHHHHHHHHHHHHH-HhhcccccC
Q 040120 6 VKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVK-CSKGKPFFGGSQIGFLDIAFGCYLGWVRVT-EKMNEVKLL 83 (131)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~-~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~-~~~~~~~~~ 83 (131)
++++..|...+..+.++.-+...+.+...|+.|++.|+. + +++|+.|+++|.||+.+.|-+..+... .++.++++
T Consensus 103 ~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~--~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~I- 179 (221)
T KOG1422|consen 103 SDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPS--RRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEI- 179 (221)
T ss_pred HHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCcc--CCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCC-
Confidence 466666666654433333334456778889999999984 3 589999999999999999988766543 34566665
Q ss_pred CCCCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHH
Q 040120 84 DEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKV 120 (131)
Q Consensus 84 ~~~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 120 (131)
++.++.+.+|+..+-++.++..+.|..+.+...|.-
T Consensus 180 -P~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~ 215 (221)
T KOG1422|consen 180 -PASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAP 215 (221)
T ss_pred -chhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhh
Confidence 689999999999999999999999987777666654
No 55
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.90 E-value=6.7e-09 Score=70.40 Aligned_cols=65 Identities=31% Similarity=0.328 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 28 IEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 28 ~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
++.|.+.++..-+.+.+ +++|++|+++|+||+.+++.+..+..+. +.. |...+|+|.+|++||.+
T Consensus 81 r~~L~~a~~~w~~~~~~---~~~FlaGd~ptIADisvyg~l~s~e~~~---~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 81 REWLYDALNTWVAALGK---DRQFHGGSKPNLADLAVYGVLRSVEGHP---AFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHhcC---CCCccCCCCCCHHHHHHHHHHHHHHHhc---ccc--chhhCcCHHHHHHHHHH
Confidence 44555555554444442 5689999999999999999886664432 320 34789999999999987
No 56
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.87 E-value=6.3e-09 Score=68.88 Aligned_cols=70 Identities=21% Similarity=0.158 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHh-hcccccCCCCCCchHHHHHHHHh
Q 040120 25 EAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEK-MNEVKLLDEVKTPGLFKWAERFC 99 (131)
Q Consensus 25 ~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~-~~~~~~~~~~~~P~L~~w~~r~~ 99 (131)
++..+.+.+.++.|+..|. +++||+|+++|.+|+++++++.++..... ....... ...+|+|.+|.+||.
T Consensus 56 ee~~~~~~~~l~aLs~~Lg----~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~-~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 56 DQVIEEVDQCCQALSQRLG----TQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEK-VKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHHHC----CCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHH-HHhCcHHHHHHHhcC
Confidence 3445667788999999998 67999999999999999998876642200 0011111 378999999999983
No 57
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.85 E-value=1.5e-08 Score=68.02 Aligned_cols=72 Identities=21% Similarity=0.213 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHh-hcccccCCCCCCchHHHHHHHHhc
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEK-MNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~-~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
.++..++..+.++.||+.|. +++||+|+++|.+|+.+++++..+..... ...... ....+|+|.+|++||.+
T Consensus 62 ~~~~~~~a~~~l~~l~~~L~----~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~-~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 62 EAEIYRDAKECLNLLSQRLG----ESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQN-HLKQCPNLCRFCDRILS 134 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHC----CCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHH-HHHHCcHHHHHHHHHHH
Confidence 44556677889999999998 67999999999999999998765532110 000001 13789999999999985
No 58
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.82 E-value=5.1e-09 Score=74.70 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCc-hHHHHHHHHhchhhh
Q 040120 26 AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTP-GLFKWAERFCADAAV 104 (131)
Q Consensus 26 ~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P-~L~~w~~r~~~~p~v 104 (131)
+..+.+.+.|+.+|+.|. +++|++| ++|+||+++++++.|+... .+ -.+| +|.+|++||.+++++
T Consensus 141 ~~~~~~~~~l~~le~~L~----~~~~l~g-~~TiADi~l~~~l~~~~~~---~~------~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 141 GLLEEINADLEELDKLID----GPNAVNG-ELSEDDILVFPLLRNLTLV---AG------INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHHHHHHh----CccccCC-CCCHHHHHHHHHhcCeeee---cC------CCCChHHHHHHHHHHHHhCC
Confidence 456778899999999998 6789865 6999999999988766422 11 1367 999999999999876
Q ss_pred h
Q 040120 105 K 105 (131)
Q Consensus 105 ~ 105 (131)
.
T Consensus 207 ~ 207 (209)
T TIGR02182 207 P 207 (209)
T ss_pred C
Confidence 4
No 59
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.80 E-value=2e-08 Score=71.58 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhhh
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKD 106 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~ 106 (131)
........+..+++.|..+ +++|++|+++|+||+++...+..+... ..... .+.+|+|.++.+|+.++|.+++
T Consensus 124 ~~Pa~~~~~~~~~~~L~~~--~sgflvGd~lT~aDl~i~e~l~~l~~~---~~~~~--~~~~P~L~a~~~kv~~~p~ik~ 196 (206)
T KOG1695|consen 124 YLPAKPKYFKILEKILKKN--KSGFLVGDKLTWADLVIAEHLDTLEEL---LDPSA--LDHFPKLKAFKERVSSIPNIKK 196 (206)
T ss_pred hccchHHHHHHHHHHHHhC--CCCeeecCcccHHHHHHHHHHHHHHHh---cCchh--hccChHHHHHHHHHhcCchHHH
Confidence 3446678899999999865 668999999999999999877555331 11122 2678999999999999999998
Q ss_pred cCCC
Q 040120 107 VMPE 110 (131)
Q Consensus 107 ~~~~ 110 (131)
++.+
T Consensus 197 ~i~~ 200 (206)
T KOG1695|consen 197 YLES 200 (206)
T ss_pred HHhc
Confidence 7644
No 60
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.73 E-value=7.3e-08 Score=69.73 Aligned_cols=82 Identities=21% Similarity=0.266 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHh
Q 040120 20 GAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFC 99 (131)
Q Consensus 20 ~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~ 99 (131)
+....++...++...+..+|..|. ++.|++|+++|+||+.+.+.+..+.. ..... .+..++|++.+|++++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~e~~l~----~~~yl~g~~~tlADl~~~~~~~~~~~--~~~~~--~~~~~~p~v~~W~~~~~ 198 (226)
T KOG0867|consen 127 NPTAVKELEAKLRKALDNLERFLK----TQVYLAGDQLTLADLSLASTLSQFQG--KFATE--KDFEKYPKVARWYERIQ 198 (226)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHc----cCCcccCCcccHHHHHHhhHHHHHhH--hhhhh--hhhhhChHHHHHHHHHH
Confidence 344455677889999999999998 56899999999999999997765531 11111 23589999999999999
Q ss_pred chhhhhhcCC
Q 040120 100 ADAAVKDVMP 109 (131)
Q Consensus 100 ~~p~v~~~~~ 109 (131)
++|+..+..+
T Consensus 199 ~~P~~~e~~~ 208 (226)
T KOG0867|consen 199 KRPAYEEANE 208 (226)
T ss_pred hCccHHHHHH
Confidence 9988777553
No 61
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=3e-08 Score=72.87 Aligned_cols=98 Identities=19% Similarity=0.195 Sum_probs=77.4
Q ss_pred cchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcc---ccc
Q 040120 6 VKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNE---VKL 82 (131)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~---~~~ 82 (131)
.++....|++.+++.++..+++.+++.+.|+.+|..|+ ++.|++|+++|-||+-+++.+-++... +.+ .++
T Consensus 185 ~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~----~~ryl~Gd~lTEAD~RLftTlvRFD~V--YvgHFKCN~ 258 (324)
T COG0435 185 DTVNNGVYKAGFATTQEAYEEAVKKLFEALDKLEQILS----ERRYLTGDQLTEADIRLFTTLVRFDPV--YVGHFKCNL 258 (324)
T ss_pred ccccCceeeecccchHHHHHHHHHHHHHHHHHHHHHhh----cCeeeccccchHhhhhhhheeEeecce--EEeeeeccc
Confidence 34444567777777788888999999999999999999 678999999999999999988666432 111 111
Q ss_pred CCCCCCchHHHHHHHHhchhhhhhcCC
Q 040120 83 LDEVKTPGLFKWAERFCADAAVKDVMP 109 (131)
Q Consensus 83 ~~~~~~P~L~~w~~r~~~~p~v~~~~~ 109 (131)
-.-..||+|..|...+-..|+|..+.-
T Consensus 259 ~rI~dypnL~~yLr~LYq~pg~~~T~d 285 (324)
T COG0435 259 RRIRDYPNLWGYLRDLYQLPGFAETVD 285 (324)
T ss_pred chhhcCchHHHHHHHHhcCcccccccc
Confidence 112569999999999999999999874
No 62
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=2.7e-07 Score=64.04 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhhhc
Q 040120 28 IEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDV 107 (131)
Q Consensus 28 ~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~~ 107 (131)
..-+.+++..||+.|... .|.|-+||++|+||+++.|.+.-+.+. . +|...||.+.+-.+.+.+.|+|+.+
T Consensus 134 q~~ItkGF~ALEklL~~~--aGkycvGDevtiADl~L~pqv~nA~rf----~---vdl~PYPti~ri~e~l~elpaFq~a 204 (217)
T KOG0868|consen 134 QHFITKGFTALEKLLKSH--AGKYCVGDEVTIADLCLPPQVYNANRF----H---VDLTPYPTITRINEELAELPAFQAA 204 (217)
T ss_pred HHHHHHhHHHHHHHHHHc--cCCcccCceeehhhhccchhhhhhhhc----c---ccCCcCchHHHHHHHHHhCHHHHhc
Confidence 455789999999999865 578999999999999999988655433 2 3558999999999999999999988
Q ss_pred CCC
Q 040120 108 MPE 110 (131)
Q Consensus 108 ~~~ 110 (131)
-|+
T Consensus 205 hP~ 207 (217)
T KOG0868|consen 205 HPD 207 (217)
T ss_pred CCC
Confidence 765
No 63
>PLN02907 glutamate-tRNA ligase
Probab=98.54 E-value=2.4e-07 Score=76.85 Aligned_cols=66 Identities=15% Similarity=0.238 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhh
Q 040120 30 QLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAA 103 (131)
Q Consensus 30 ~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~ 103 (131)
++...++.+|..|+ .++|++|+++|+||+++++.+..+... ..+... .+.||+|.+|+++|.++|+
T Consensus 94 ~l~~~L~~LE~~L~----~rtYLvGd~lTLADIaL~~~L~~~~~~--~~~~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLA----SRTFLVGYSLTIADIAIWSGLAGSGQR--WESLRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhc----cCCeecCCCCCHHHHHHHHHHHhhhhh--hhcccc--cccCHHHHHHHHHHHhCCC
Confidence 34567889999997 578999999999999999876443111 111111 3789999999999999999
No 64
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.45 E-value=7.8e-08 Score=70.18 Aligned_cols=101 Identities=22% Similarity=0.221 Sum_probs=76.3
Q ss_pred cchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHH--Hhh-ccccc
Q 040120 6 VKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVT--EKM-NEVKL 82 (131)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~--~~~-~~~~~ 82 (131)
.++.-..|++.+++.++..+....++-+.|+.+|..|+++ .+.|++|+++|-|||-+++.+-++.-. ++. .....
T Consensus 183 ~~INNGVYk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~--~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ 260 (319)
T KOG2903|consen 183 DKINNGVYKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKN--RKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKT 260 (319)
T ss_pred ccccCceeeeccccccchHHHHHHHHHHHHHHHHHHHhcc--cceEeeccccchhheeeeeeEEeehhhhheeeecchhh
Confidence 3454556777777777788888999999999999999864 445899999999999999977555321 111 11122
Q ss_pred CCCCCCchHHHHHHHHhc-hhhhhhcCC
Q 040120 83 LDEVKTPGLFKWAERFCA-DAAVKDVMP 109 (131)
Q Consensus 83 ~~~~~~P~L~~w~~r~~~-~p~v~~~~~ 109 (131)
+ .++||+|..|..++-. .|+++.+.-
T Consensus 261 i-r~~Yp~l~~~lk~iY~~~~~~~~Ttd 287 (319)
T KOG2903|consen 261 I-RDEYPNLHNWLKNIYWNIPGFSSTTD 287 (319)
T ss_pred h-hccCcHHHHHHHHHHhhccchhhccc
Confidence 2 4799999999999887 999998763
No 65
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.91 E-value=6.3e-05 Score=48.71 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhh
Q 040120 25 EAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAV 104 (131)
Q Consensus 25 ~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v 104 (131)
++....+.+-+...+..|.. +++|+.| ..|+||..+.|++.++... |.++ -+++..|.++.-++|+|
T Consensus 42 ~~a~~~a~kL~~~a~~ll~~---g~~~LFG-ewsIAD~dlA~ml~Rl~~~----gd~v-----P~~l~~Ya~~qwqrpsV 108 (117)
T PF14834_consen 42 EAAQAAAQKLIAVAERLLAD---GGPNLFG-EWSIADADLALMLNRLVTY----GDPV-----PERLADYAERQWQRPSV 108 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTT-----SSTTS-S--HHHHHHHHHHHHHHTT----T---------HHHHHHHHHHHT-HHH
T ss_pred HHHHHHHHHHHHHHHHHhcc---CCCCccc-cchHHHHHHHHHHHHHHHc----CCCC-----CHHHHHHHHHHHCCHHH
Confidence 34445555566667777764 5688776 5899999999999888643 4322 26999999999999999
Q ss_pred hhcC
Q 040120 105 KDVM 108 (131)
Q Consensus 105 ~~~~ 108 (131)
++.+
T Consensus 109 Q~Wl 112 (117)
T PF14834_consen 109 QRWL 112 (117)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9865
No 66
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=97.69 E-value=2.4e-05 Score=57.42 Aligned_cols=68 Identities=26% Similarity=0.232 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhc--ccccCCCCCCchHHHHHHHHhc
Q 040120 26 AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMN--EVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 26 ~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~--~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
+..+.+++-|+.++..|. +++|+.|+++|-+|+.++..+.-+.. + .. -.+++ ..++|+|..+.+||++
T Consensus 203 Ei~ell~rDlr~i~~~Lg----~KkflfGdkit~~DatvFgqLa~v~Y-P-~~~~i~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 203 EIDELLHRDLRAISDYLG----DKKFLFGDKITPADATVFGQLAQVYY-P-FRSHISDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHHhC----CCccccCCCCCcceeeehhhhhheec-c-CCCcHHHHH-hhhchHHHHHHHHHHH
Confidence 345677899999999998 67999999999999999986644322 1 10 01234 4789999999999998
No 67
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.55 E-value=0.00026 Score=47.22 Aligned_cols=66 Identities=17% Similarity=0.200 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhh
Q 040120 26 AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAV 104 (131)
Q Consensus 26 ~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v 104 (131)
+...++...|..+|..+. ... ..+.++|+-|+.++|+++-+... .|+.+ -|++.+|+++|.+.-.|
T Consensus 59 ~~i~~l~~~L~~Le~ll~----~~~-~~n~~LS~dDi~lFp~LR~Ltiv---kgi~~-----P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 59 ELIAELNADLEELEPLLA----SPN-AVNGELSIDDIILFPILRSLTIV---KGIQW-----PPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHH-S----CTT-BTTSS--HHHHHHHHHHHHHCTC---TTS--------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHhc----ccc-ccCCCCCHHHHHHHHHHhhhhhc---cCCcC-----CHHHHHHHHHHHHHcCC
Confidence 345677788888888886 233 34449999999999998766432 35433 27999999999986655
No 68
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.41 E-value=0.00089 Score=44.42 Aligned_cols=65 Identities=20% Similarity=0.117 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhh
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAV 104 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v 104 (131)
..+++...|..++..+. . +-..+..+|+-|+.++|+++-+... .|+.+ -|+|.+|+++|.+.-.|
T Consensus 61 ~i~~l~~~L~~l~~ll~----~-~~~~n~~ls~DDi~lFp~LR~Lt~v---kgi~~-----P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 61 YIAALNALLEELDPLIL----S-SEAVNGQLSTDDIILFPILRNLTLV---KGLVF-----PPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHc----C-ccccCCcCCHHHHHHHHHHhhhhhh---cCCCC-----CHHHHHHHHHHHHHhCC
Confidence 34566677778887774 2 2234668999999999999766543 35433 27999999999986544
No 69
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=97.35 E-value=0.00066 Score=50.57 Aligned_cols=65 Identities=20% Similarity=0.293 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhc
Q 040120 28 IEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 28 ~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~ 100 (131)
++.+.+..+.--..+++ +.+|++|++|++||+.++.++.-+..++... ++ -...++..|+-||..
T Consensus 290 Re~lydA~d~Wvaalgk---nr~flGG~kPnLaDLsvfGvl~sm~gc~afk--d~---~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 290 REHLYDAADQWVAALGK---NRPFLGGKKPNLADLSVFGVLRSMEGCQAFK--DC---LQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHHHHhCC---CCCccCCCCCchhhhhhhhhhhHhhhhhHHH--HH---HhcchHHHHHHHHHH
Confidence 44555566666666654 6799999999999999999998777665432 22 245789999999976
No 70
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.72 E-value=0.0033 Score=44.94 Aligned_cols=70 Identities=21% Similarity=0.224 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhccc---ccCCCCCCchHHHHHHHHhc
Q 040120 24 KEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEV---KLLDEVKTPGLFKWAERFCA 100 (131)
Q Consensus 24 ~~~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~---~~~~~~~~P~L~~w~~r~~~ 100 (131)
.++..+++....+.|+..|+ .++||.|++||=+|..++.-+.-+.... ...- .. ..+||+|.++..|+.+
T Consensus 175 ~DqVie~vdkc~~aLsa~L~----~q~yf~g~~P~elDAlvFGHlytilTt~-Lpn~ela~~--lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 175 MDQVIEQVDKCCRALSAQLG----SQPYFTGDQPTELDALVFGHLYTILTTR-LPNMELANI--LKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhc----CCCccCCCCccHHHHHHHhhhHHhhhhc-CCcHHHHHH--HHHhHHHHHHHHHHHH
Confidence 44566777888999999998 6799999999999999988664443221 0000 11 2789999999988876
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.62 E-value=0.041 Score=41.53 Aligned_cols=70 Identities=21% Similarity=0.260 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccC-CCCCCchHHHHHHHHhc
Q 040120 26 AAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLL-DEVKTPGLFKWAERFCA 100 (131)
Q Consensus 26 ~~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~-~~~~~P~L~~w~~r~~~ 100 (131)
+......+++..++..|+ .+.||.|+++|-.|..++..+..+-..+ .....+. ....+|+|.++.+++++
T Consensus 163 ~i~~~Aska~~~LS~~Lg----s~kffFgd~psslDa~lfs~la~~~~~~-Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 163 QIYKDASKALNLLSTLLG----SKKFFFGDKPSSLDALLFSYLAILLQVA-LPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHHHhc----CceEeeCCCCchHHHHHHHHHHHHHhcc-CCchhHHHHHHhcchHHHHHHHHHH
Confidence 344556788899998888 5789999999999999998775532211 1000110 01338999999999876
No 72
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=88.48 E-value=1.3 Score=31.24 Aligned_cols=64 Identities=14% Similarity=0.186 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCc-hHHHHHHHHhchhhh
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTP-GLFKWAERFCADAAV 104 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P-~L~~w~~r~~~~p~v 104 (131)
...++...++.+++.+. +.. -....+++=|+.+||+++-+... .|. .|| ++..|+.+|.+.-.|
T Consensus 143 ~~~~i~~dl~~l~~Li~----~~s-~~n~~l~~ddi~vFplLRnlt~v---~gi------~wps~v~dy~~~msektqV 207 (215)
T COG2999 143 YLKRIQADLRALDKLIV----GPS-AVNGELSEDDILVFPLLRNLTLV---AGI------QWPSRVADYRDNMSEKTQV 207 (215)
T ss_pred HHHHHHHHHHHHHHHhc----Ccc-hhccccchhhhhhhHHhccceec---ccC------CCcHHHHHHHHHHHHhhCc
Confidence 34666788888888886 322 34667899999999998655322 232 345 899999999885544
No 73
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=83.57 E-value=2 Score=35.32 Aligned_cols=59 Identities=17% Similarity=0.263 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHH
Q 040120 30 QLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAE 96 (131)
Q Consensus 30 ~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~ 96 (131)
++...+..+++.|. -..|++|.++|+||+++|..+.---..+.. +.. ...+-++.+|++
T Consensus 92 ~~s~~~~~ld~~l~----~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~--lk~--~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 92 EISSSLSELDKFLV----LRTFLVGNSLSIADFAIWGALHSNGMRQEQ--LKA--KKDYQNVERWYD 150 (712)
T ss_pred HHHHHHHHHHhhhh----HHHHhhccchhHHHHHHHHHHhcccchHHH--HHh--hCCchhhhhhcC
Confidence 34566667777765 357999999999999999877421000000 000 134567888887
No 74
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=83.47 E-value=5.3 Score=27.63 Aligned_cols=37 Identities=30% Similarity=0.329 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhhccCCCCCcccCCC-CChhHHHHHHHH
Q 040120 31 LIEGLVLLEDAFVKCSKGKPFFGGSQ-IGFLDIAFGCYL 68 (131)
Q Consensus 31 l~~~l~~le~~l~~~~~~~~f~~G~~-~t~aDi~l~p~~ 68 (131)
-.+.+..|++.|+... ..+|+.|+. +|-+|+.++..+
T Consensus 113 a~~~l~~L~~~L~~~~-~~~~~f~~~~psslD~L~~ayL 150 (168)
T PF11801_consen 113 AMECLSLLEELLGEWE-EARYFFGDSKPSSLDCLAFAYL 150 (168)
T ss_pred HHHHHHHHHHHHhhcc-ccccccCCCCCCHHHHHHHHHH
Confidence 3477888898887310 127777776 999999998644
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=60.84 E-value=11 Score=27.55 Aligned_cols=60 Identities=17% Similarity=0.199 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHHHHHHHHhhcccccCCCCCCchHHHHHHHHhchhhhhh
Q 040120 32 IEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKD 106 (131)
Q Consensus 32 ~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~p~v~~ 106 (131)
...++.++..|. +.+|..|..++-.|+.++-- + +... ....+++..+|+..+.+.....+
T Consensus 10 ~~glk~l~~sLA----~ks~~~g~~~s~edv~vf~a------l----~~ep-~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLA----EKSYIEGYQLSKEDVVVFAA------L----GVEP-QSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhh----cccCCCCCCcccccceeehh------c----ccCc-chhhhhHHHHHHHHHHHHHHHHh
Confidence 457788888998 67899999999999988731 1 2211 14678899999988888766653
No 76
>PF10414 CysG_dimeriser: Sirohaem synthase dimerisation region; InterPro: IPR019478 Bacterial sulphur metabolism depends on the iron-containing porphinoid sirohaem. CysG is a multi-functional enzyme with S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase, dehydrogenase and ferrochelatase activities. CysG synthesizes sirohaem from uroporphyrinogen III via reactions which encompass two branchpoint intermediates in tetrapyrrole biosynthesis, diverting flux first from protoporphyrin IX biosynthesis and then from cobalamin (vitamin B12) biosynthesis. CysG is a dimer. Its dimerisation region is 74 residues long, and acts to hold the two structurally similar protomers held together asymmetrically through a number of salt-bridges across complementary residues within the dimerisation region []. CysG dimerisation produces a series of active sites, accounting for CysG's multi-functionality, catalysing four diverse reactions: Two SAM-dependent methylations NAD+-dependent tetrapyrrole dehydrogenation Metal chelation ; GO: 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1PJT_A 1PJS_A 1PJQ_A.
Probab=53.30 E-value=37 Score=18.94 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=13.6
Q ss_pred HHHHHHHhc-hhhhhhcCCChHHHHHHHHHHH
Q 040120 92 FKWAERFCA-DAAVKDVMPETDKLAEFAKVLA 122 (131)
Q Consensus 92 ~~w~~r~~~-~p~v~~~~~~~~~~~~~~~~~~ 122 (131)
..|.+-+.. |+.|+..+|+...=-.||..+.
T Consensus 4 g~lA~l~~~~R~~Vk~~l~~~~~RR~FWe~~~ 35 (60)
T PF10414_consen 4 GRLAELAGRFRERVKQRLPDFAERRRFWERFF 35 (60)
T ss_dssp HHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 333444333 4555555555444444444443
No 77
>PF01152 Bac_globin: Bacterial-like globin; InterPro: IPR001486 Globins are haem-containing proteins involved in binding and/or transporting oxygen. They belong to a very large and well studied family that is widely distributed in many organisms []. Globins have evolved from a common ancestor and can be divided into three groups: single-domain globins, and two types of chimeric globins, flavohaemoglobins and globin-coupled sensors. Bacteria have all three types of globins, while archaea lack flavohaemoglobins, and eukaryotes lack globin-coupled sensors []. Several functionally different haemoglobins can coexist in the same species. The major types of globins include: Haemoglobin (Hb): trimer of two alpha and two beta chains, although embryonic and foetal forms can substitute the alpha or beta chain for ones with higher oxygen affinity, such as gamma, delta, epsilon or zeta chains. Hb transports oxygen from lungs to other tissues in vertebrates []. Hb proteins are also present in unicellular organisms where they act as enzymes or sensors []. Myoglobin (Mb): monomeric protein responsible for oxygen storage in vertebrate muscle []. Neuroglobin: a myoglobin-like haemprotein expressed in vertebrate brain and retina, where it is involved in neuroprotection from damage due to hypoxia or ischemia []. Neuroglobin belongs to a branch of the globin family that diverged early in evolution. Cytoglobin: an oxygen sensor expressed in multiple tissues. Related to neuroglobin []. Erythrocruorin: highly cooperative extracellular respiratory proteins found in annelids and arthropods that are assembled from as many as 180 subunit into hexagonal bilayers []. Leghaemoglobin (legHb or symbiotic Hb): occurs in the root nodules of leguminous plants, where it facilitates the diffusion of oxygen to symbiotic bacteriods in order to promote nitrogen fixation. Non-symbiotic haemoglobin (NsHb): occurs in non-leguminous plants, and can be over-expressed in stressed plants []. Flavohaemoglobins (FHb): chimeric, with an N-terminal globin domain and a C-terminal ferredoxin reductase-like NAD/FAD-binding domain. FHb provides protection against nitric oxide via its C-terminal domain, which transfers electrons to haem in the globin []. Globin-coupled sensors: chimeric, with an N-terminal myoglobin-like domain and a C-terminal domain that resembles the cytoplasmic signalling domain of bacterial chemoreceptors. They bind oxygen, and act to initiate an aerotactic response or regulate gene expression [, ]. Protoglobin: a single domain globin found in archaea that is related to the N-terminal domain of globin-coupled sensors []. Truncated 2/2 globin: lack the first helix, giving them a 2-over-2 instead of the canonical 3-over-3 alpha-helical sandwich fold. Can be divided into three main groups (I, II and II) based on structural features []. This entry represents a group of haemoglobin-like proteins found in eubacteria, cyanobacteria, protozoa, algae and plants, but not in animals or yeast. These proteins have a truncated 2-over-2 rather than the canonical 3-over-3 alpha-helical sandwich fold []. This entry includes: HbN (or GlbN): a truncated haemoglobin-like protein that binds oxygen cooperatively with a very high affinity and a slow dissociation rate, which may exclude it from oxygen transport. It appears to be involved in bacterial nitric oxide detoxification and in nitrosative stress []. Cyanoglobin (or GlbN): a truncated haemoprotein found in cyanobacteria that has high oxygen affinity, and which appears to serve as part of a terminal oxidase, rather than as a respiratory pigment []. HbO (or GlbO): a truncated haemoglobin-like protein with a lower oxygen affinity than HbN. HbO associates with the bacterial cell membrane, where it significantly increases oxygen uptake over membranes lacking this protein. HbO appears to interact with a terminal oxidase, and could participate in an oxygen/electron-transfer process that facilitates oxygen transfer during aerobic metabolism []. Glb3: a nuclear-encoded truncated haemoglobin from plants that appears more closely related to HbO than HbN. Glb3 from Arabidopsis thaliana (Mouse-ear cress) exhibits an unusual concentration-independent binding of oxygen and carbon dioxide []. ; GO: 0019825 oxygen binding, 0015671 oxygen transport; PDB: 2BKM_B 1UVY_A 1DLW_A 2XYK_B 2IG3_A 2GKM_B 1S61_A 1S56_B 1RTE_B 2GLN_A ....
Probab=40.63 E-value=85 Score=19.77 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=26.0
Q ss_pred chHHHHHHHHhchhhhhhcCC--ChHHHHHHHHHHHHHHHhc
Q 040120 89 PGLFKWAERFCADAAVKDVMP--ETDKLAEFAKVLAKLRASG 128 (131)
Q Consensus 89 P~L~~w~~r~~~~p~v~~~~~--~~~~~~~~~~~~~~~~~~~ 128 (131)
.-+..+|+||.+.|.+..... +.+++.+.+..+...+-||
T Consensus 14 ~lv~~fY~rv~~d~~l~~~F~~~d~~~~~~~~~~fl~~~~GG 55 (120)
T PF01152_consen 14 ALVDAFYDRVLADPRLKPFFEGIDLEKHKEKQAEFLSQLLGG 55 (120)
T ss_dssp HHHHHHHHHHHT-TTTGGGGTTSCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCHHHHhhcCCCCHHHHHHHHHHHHHHHhCC
Confidence 346788999999888777544 4555666666666666555
No 78
>cd01068 sensor_globin Globin domain present in Globin-Coupled-Sensors (GCS). These domains detect changes in intracellular concentrations of oxygen, carbon monoxyde, or nitrous oxide, which result in aerotaxis and/or gene regulation. One subgroup, the HemATs, are aerotactic heme sensors combining a globin with an MCP signaling domain, others function as gene regulators, by direct combination with DNA-binding domains, with domains modulating 2nd messengers, or with domains interacting with transcription factors or regulators.
Probab=37.08 E-value=1e+02 Score=19.98 Aligned_cols=40 Identities=8% Similarity=0.100 Sum_probs=25.2
Q ss_pred HHHHHHHHhchhhhhhcCCC---hHHHHHHHHHHHHHHHhcCC
Q 040120 91 LFKWAERFCADAAVKDVMPE---TDKLAEFAKVLAKLRASGKW 130 (131)
Q Consensus 91 L~~w~~r~~~~p~v~~~~~~---~~~~~~~~~~~~~~~~~~~~ 130 (131)
+..+|+++.+.|.++..... .+++..........+-+|.+
T Consensus 35 ~~~FY~~l~~~p~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 77 (147)
T cd01068 35 VDRFYDHLRRTPETAAFLGDESVVERLKSTQRRHWVELFSGVY 77 (147)
T ss_pred HHHHHHHHhcChHHHHHhCCchHHHHHHHHHHHHHHHHhCCCC
Confidence 46677777777777776542 24555556666666666654
No 79
>PHA02096 hypothetical protein
Probab=35.13 E-value=35 Score=20.83 Aligned_cols=39 Identities=18% Similarity=0.016 Sum_probs=25.6
Q ss_pred CccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhh
Q 040120 2 AKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFV 43 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~ 43 (131)
+|++.++.+.+..++++.. -+++...+++.-+.+++.|+
T Consensus 16 hfv~gnl~g~~~gv~fh~s---we~a~~~~~~ak~~i~eylk 54 (103)
T PHA02096 16 HFVSGNLHGAFGGVMFHDS---WEEADVSLKNAKKSIEEYLK 54 (103)
T ss_pred EeecCcccccccceEEecc---HHHhhhHHHHHHHHHHHHhc
Confidence 5788888888888877732 22334455566666777776
No 80
>KOG3478 consensus Prefoldin subunit 6, KE2 family [Posttranslational modification, protein turnover, chaperones]
Probab=34.54 E-value=92 Score=20.22 Aligned_cols=23 Identities=13% Similarity=0.115 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 040120 21 AEAKEAAIEQLIEGLVLLEDAFV 43 (131)
Q Consensus 21 ~~~~~~~~~~l~~~l~~le~~l~ 43 (131)
+.+.++++..+.+.+++|++.++
T Consensus 64 kqel~EAr~nV~kRlefI~~Eik 86 (120)
T KOG3478|consen 64 KQELEEARTNVGKRLEFISKEIK 86 (120)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHH
Confidence 55677778888888888888876
No 81
>PF08020 DUF1706: Protein of unknown function (DUF1706) ; InterPro: IPR012550 This family contains many hypothetical proteins from bacteria and yeast.
Probab=33.52 E-value=1.6e+02 Score=20.39 Aligned_cols=52 Identities=23% Similarity=0.364 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccC---CCCCc-ccCCCCChhHHHHHHHHHHHHHH
Q 040120 22 EAKEAAIEQLIEGLVLLEDAFVKCS---KGKPF-FGGSQIGFLDIAFGCYLGWVRVT 74 (131)
Q Consensus 22 ~~~~~~~~~l~~~l~~le~~l~~~~---~~~~f-~~G~~~t~aDi~l~p~~~~~~~~ 74 (131)
..+++....+...+..|.+.+..-+ -..++ ++|-..|+.|++.+ .+.|..++
T Consensus 5 ~tK~eLl~ai~~~~~kL~~~~~~ipee~~~~~~~~~~~d~~~~DvLay-l~gW~~Ll 60 (166)
T PF08020_consen 5 TTKAELLEAIEKNYEKLISEIDSIPEEQKDTPFDFGGRDRNPRDVLAY-LYGWHELL 60 (166)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCHHHhcCccccccccCCHHHHHHH-HHHHHHHH
Confidence 3445556666666666666654221 02333 23778999999877 44565443
No 82
>PF02646 RmuC: RmuC family; InterPro: IPR003798 This protein contains several bacterial RmuC DNA recombination proteins. The function of the RMUC protein is unknown but it is suspected that it is either a structural protein that protects DNA against nuclease action, or is itself involved in DNA cleavage at the regions of DNA secondary structures []. Proteins in this family are predicted to contain a central endonuclease-like fold domain, surrounded by coiled coils, consistent with a direct role in DNA cleavage [, ].
Probab=33.06 E-value=1.4e+02 Score=22.55 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=23.7
Q ss_pred cccchh-HHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhh
Q 040120 4 SDVKLF-PALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFV 43 (131)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~ 43 (131)
||+|+. ..+-.++.+.++++++.+.+++...++..-+.|+
T Consensus 122 IDSK~pl~~y~~~~~a~~~~~~~~~~k~~~~~vr~hi~~Ls 162 (304)
T PF02646_consen 122 IDSKFPLEAYERYIEAEDEEEREAALKEHAKSVRKHIKELS 162 (304)
T ss_pred EecCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678884 4444555555666666666665555555445555
No 83
>PF15652 Tox-SHH: HNH/Endo VII superfamily toxin with a SHH signature
Probab=32.21 E-value=33 Score=21.78 Aligned_cols=6 Identities=50% Similarity=1.431 Sum_probs=2.7
Q ss_pred HhcCCC
Q 040120 126 ASGKWN 131 (131)
Q Consensus 126 ~~~~~~ 131 (131)
|+||||
T Consensus 59 g~gkw~ 64 (100)
T PF15652_consen 59 GGGKWS 64 (100)
T ss_pred CCCCcc
Confidence 344453
No 84
>PF11563 Protoglobin: Protoglobin; PDB: 2VEE_G 3QZZ_A 3R0G_A 3QZX_A 2VEB_A 1OR6_A 1OR4_B 2W31_B.
Probab=28.94 E-value=1.4e+02 Score=19.54 Aligned_cols=41 Identities=7% Similarity=0.057 Sum_probs=26.4
Q ss_pred hHHHHHHHHhchhhhhhcCCC---hHHHHHHHHHHHHHHHhcCC
Q 040120 90 GLFKWAERFCADAAVKDVMPE---TDKLAEFAKVLAKLRASGKW 130 (131)
Q Consensus 90 ~L~~w~~r~~~~p~v~~~~~~---~~~~~~~~~~~~~~~~~~~~ 130 (131)
-+..+|+.+.+.|........ .+++..........+-+|.+
T Consensus 36 iv~~FY~~l~~~pe~~~~~~~~~~~~~lk~~q~~~~~~l~s~~~ 79 (158)
T PF11563_consen 36 IVDDFYDHLLRFPETARIFDSESTIERLKATQRRHWRELFSGDF 79 (158)
T ss_dssp HHHHHHHHHHTSHHHHGGGCCHCCHHHHHHHHHHHHHHCTSS-C
T ss_pred HHHHHHHHHHCCHHHHHHhCChHHHHHHHHHHHHHHHHHhCCCc
Confidence 457788888888888876554 34555556666666655543
No 85
>TIGR02269 Myxococcus xanthus paralogous lipoprotein family TIGR02269. This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N-terminus; the others are predicted lipoproteins. The function is unknown.
Probab=24.66 E-value=31 Score=24.63 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=24.3
Q ss_pred CCCchHHHHHHHHhchhhhhhcCCChHHHHHHHHHHHHHHHhcCCC
Q 040120 86 VKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAKLRASGKWN 131 (131)
Q Consensus 86 ~~~P~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (131)
.+.|.|.+|+.+ .....=.-|++-.+.+...+.+=.. .||-||
T Consensus 131 PQa~~LA~wF~~-~Gv~iHd~Tl~Ip~~vHrriH~G~g--~GGaWN 173 (211)
T TIGR02269 131 PQAPELAKWFAR-RGVKIHDFTLVIPRHTHRRIHSGAG--RGGAWN 173 (211)
T ss_pred CCCHHHHHHHHH-cCCChhheeeeccHHHHHHhhCCCC--CCChHH
Confidence 567899999998 2222222355555555555444332 456676
No 86
>PF10673 DUF2487: Protein of unknown function (DUF2487); InterPro: IPR019615 This entry represents proteins with unknown function that appears to be restricted to Bacillus sp.
Probab=23.99 E-value=1.1e+02 Score=20.60 Aligned_cols=41 Identities=22% Similarity=0.101 Sum_probs=28.7
Q ss_pred CccccchhHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhh
Q 040120 2 AKSDVKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFV 43 (131)
Q Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~ 43 (131)
.|+|+-+.|. .++-.+.+..+.....+-+......+|+.++
T Consensus 9 ~YiDTaliPL-~~i~~~~~~k~~a~~~E~~~~l~~~lErqfK 49 (142)
T PF10673_consen 9 EYIDTALIPL-IPIDFGEDMKEAASQGEFLRLLADELERQFK 49 (142)
T ss_pred cccceeeeec-cccCccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5888888754 4443344556666667777888888999997
No 87
>PRK14082 hypothetical protein; Provisional
Probab=21.60 E-value=1.8e+02 Score=16.90 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=20.6
Q ss_pred chhHHHHHhhccCCHHHHHHHHHHHH-HHHHHHH
Q 040120 7 KLFPALKSIGSADGAEAKEAAIEQLI-EGLVLLE 39 (131)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~le 39 (131)
.+.|...+.+..+..++|++..++++ +.++.+.
T Consensus 17 ~FepkIkKsL~~T~yqeREDLeQElk~Ki~eK~~ 50 (65)
T PRK14082 17 NFSPMIKKKLSNTSYQEREDLEQELKIKIIEKAD 50 (65)
T ss_pred HccHHHHHHHhcCChhhHHHHHHHHHHHHHHHHH
Confidence 34455556666677888888887765 3344443
No 88
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=21.18 E-value=1.7e+02 Score=22.36 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHH
Q 040120 30 QLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGC 66 (131)
Q Consensus 30 ~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p 66 (131)
+|...+..||..-.+- ...-..|.++|+||++.+.
T Consensus 73 ~L~~~~~~Le~ik~~~--~~~~~~~~~vS~ADLivLa 107 (297)
T cd08200 73 ELAKVLAVLEGIQKEF--NESQSGGKKVSLADLIVLG 107 (297)
T ss_pred HHHHHHHHHHHHHHHh--cccccCCccccHHHHHHHH
Confidence 3555666666543321 0112346689999997764
No 89
>PRK15371 effector protein YopJ; Provisional
Probab=20.71 E-value=1.9e+02 Score=22.02 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCChhHHHHHHHHH
Q 040120 27 AIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLG 69 (131)
Q Consensus 27 ~~~~l~~~l~~le~~l~~~~~~~~f~~G~~~t~aDi~l~p~~~ 69 (131)
..+++...++.||..++ .+.++ .+.++..|+-..|.+-
T Consensus 24 ~~~~L~~~i~~le~~~~----~G~~~-~~~~~~~Di~~lp~lv 61 (287)
T PRK15371 24 SNEELKNIITQLEDDIA----DGSWI-HKNYARTDLEVMPALV 61 (287)
T ss_pred hHHHHHHHHHHHHHHHH----cCCCC-CchhHHhhHHhhHHHH
Confidence 46788999999999998 45555 6778999999999764
Done!