BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040121
(368 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GZ92|BRXL4_ARATH Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2
SV=1
Length = 384
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 321 SSNDNEWIEQDDPGGYIALTSLPGGLNYLKRVRF---RFME 358
S DNEW+EQD+PG YI + LPGG L+RVRF RF E
Sbjct: 325 SDVDNEWVEQDEPGVYITIKVLPGGKRELRRVRFSRERFGE 365
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 320 ESSNDNEWIEQDDPGGYIALTSLPGGLNYLKRVRF-RFMETRIDKRR 365
E EW+ Q +PG I SLPGG N LKR+RF R M ++ +R
Sbjct: 145 EEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQR 191
>sp|Q6YUB8|BRXL1_ORYSJ Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica
GN=BRXL1 PE=2 SV=1
Length = 397
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 293 SSTASNRSSKQCQSEAATRNGSRTKEGESSNDNEWIEQDDPGGYIALTSLPGGLNYLKRV 352
S AS RSS + +R S + S + EW+E+D+PG YI + +LPGG+ L+RV
Sbjct: 310 SMDASMRSSSSPEEVDRSRELSVSVSNASDQEREWVEEDEPGVYITIRALPGGIRELRRV 369
Query: 353 RF 354
RF
Sbjct: 370 RF 371
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 236 KEVIKSLTAQLKDMAERLPVGTLRNIK-----------------SPTFTFFSSSPPSIDV 278
++ IK+LTAQ+KDMA + G R+ K P + S
Sbjct: 43 RQAIKALTAQIKDMALKAS-GAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFHY 101
Query: 279 SSR-TGSNNLLLSNGSSTASNRSSKQCQSEAATRNGSRTKEG-ESSNDNEWIEQDDPGGY 336
+ R GS + S+ + + + E T +G E EW+ Q +PG
Sbjct: 102 AYRRAGSGGDATPSVSARTDFLAGDEEEEEEEEEEEGTTADGSEDDEAKEWVAQVEPGVL 161
Query: 337 IALTSLPGGLNYLKRVRF 354
I SLP G N LKR+RF
Sbjct: 162 ITFLSLPEGGNDLKRIRF 179
>sp|O13821|VPS27_SCHPO Vacuolar protein sorting-associated protein 27
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sst4 PE=3 SV=1
Length = 610
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFS 56
CR PF F ++H+C N G VFC+ SSK + N+P R+CD+C+S
Sbjct: 179 CRTPFT-FTNRKHHCRNCGGVFCNQCSSKTLSLPHLG--INQPVRVCDSCYS 227
>sp|O82281|BRXL1_ARATH Protein Brevis radix-like 1 OS=Arabidopsis thaliana GN=BRXL1 PE=2
SV=2
Length = 331
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 236 KEVIKSLTAQLKDMAERL----------PVGTLRNI-KSPTFTFFSSSPPSIDVSSRTGS 284
KE +KSLT Q+KDMA + P + N+ K P F S S P T S
Sbjct: 31 KEAVKSLTTQIKDMASKFSGSHKQSKPTPGSSSSNLRKFPDFDTASESVPYPYPGGSTSS 90
Query: 285 NNLL-LSNGSSTASNRSSKQCQSEAATRNGSRTKEG-----ESSNDNEWIEQDDPGGYIA 338
L S S R + S S + + E EW+ Q +PG +I
Sbjct: 91 TPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCDVVLEDDEPKEWMAQVEPGVHIT 150
Query: 339 LTSLPGGLNYLKRVRF 354
SLP G N LKR+RF
Sbjct: 151 FVSLPSGGNDLKRIRF 166
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 326 EWIEQDDPGGYIALTSLPGGLNYLKRVRF---RFMET 359
EW+E+D+PG YI + LP G L+RVRF RF E
Sbjct: 277 EWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFGEV 313
>sp|Q5HZ09|BRXL3_ARATH Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2
SV=2
Length = 370
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 236 KEVIKSLTAQLKDMAERLPVGTLRNIKSPTFTFFSSSPPSI-DVSSRTGSNNLLLSNGSS 294
K+ IKSLT+QLKDMA + G +N K + T + + D + + S S +
Sbjct: 35 KQAIKSLTSQLKDMAVKAS-GAYKNCKPCSGTTNRNQNRNYADSDAASDSGRFHYSYQRA 93
Query: 295 TASNRSSKQCQSEAATR-NGSRTKEG---------------ESSNDNEWIEQDDPGGYIA 338
+ + K +E +R G ++EG E EW+ Q +PG I
Sbjct: 94 GTATSTPKIWGNEMESRLKGISSEEGTPTSMSGRTESIVFMEDDEVKEWVAQVEPGVLIT 153
Query: 339 LTSLPGGLNYLKRVRFR 355
SLP G N LKR+RFR
Sbjct: 154 FVSLPQGGNDLKRIRFR 170
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 259 RNIKSPTFTFFSSSPPSIDVSSRTGSNNLLLSNGSSTASNRSSKQCQSEAATRNGSRTKE 318
RNI P + F+S+P +S + + + S++ +RS + S A
Sbjct: 263 RNI--PGSSGFASTPKLSSISGTKTETSSIDGSARSSSVDRSEEVSVSNA---------- 310
Query: 319 GESSNDNEWIEQDDPGGYIALTSLPGGLNYLKRVRF---RFMET 359
S ++EW+EQD+PG YI + +LP G L+RVRF +F ET
Sbjct: 311 --SDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGET 352
>sp|Q7Z6J4|FGD2_HUMAN FYVE, RhoGEF and PH domain-containing protein 2 OS=Homo sapiens
GN=FGD2 PE=2 SV=1
Length = 655
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKL 58
C+ PFN R+RH+C G V C S +A + + N+P R+C +C++ L
Sbjct: 467 CQEPFNALTRRRHHCRACGYVVCARCSD---YRAELKYDDNRPNRVCLHCYAFL 517
>sp|Q8GYL9|BRXL2_ARATH Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2
SV=1
Length = 374
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 297 SNRSSKQCQSEAATRNGSRTKEGESSN-DNEWIEQDDPGGYIALTSLPGGLNYLKRVRF- 354
S RSS + E A +G +S+ + EW+EQD+ G YI + +LP G L+RVRF
Sbjct: 290 SARSSFSREEEEADHSGEELSVSNASDIETEWVEQDEAGVYITIRALPDGTRELRRVRFS 349
Query: 355 --RFMET 359
+F ET
Sbjct: 350 REKFGET 356
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 326 EWIEQDDPGGYIALTSLPGGLNYLKRVRF 354
EW+ Q +PG I SLP G N +KR+RF
Sbjct: 144 EWVAQVEPGVLITFVSLPEGGNDMKRIRF 172
>sp|Q8BY35|FGD2_MOUSE FYVE, RhoGEF and PH domain-containing protein 2 OS=Mus musculus
GN=Fgd2 PE=1 SV=1
Length = 655
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKL 58
C+ PFN R+RH+C G V C S +A + + N+P R+C C++ L
Sbjct: 467 CQEPFNALTRRRHHCRACGYVVCAKCSD---YRAELKYDSNRPNRVCLTCYTFL 517
>sp|A8XJZ8|LST2_CAEBR Lateral signaling target protein 2 OS=Caenorhabditis briggsae
GN=lst-2 PE=3 SV=1
Length = 651
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 3 SGCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKAF 62
+ C +PFN F R+RH+C N G +FCH S + ++ R+C+ C+ F
Sbjct: 564 TACSMPFN-FVRRRHHCRNCGRIFCHKCSCNSI--SIPEHGYDRKVRVCNLCYVHRLNPF 620
Query: 63 HTDDSSHSSVSRRG 76
++ S +S + G
Sbjct: 621 GCNEQSQASENNTG 634
>sp|Q5ABD9|VPS27_CANAL Vacuolar protein sorting-associated protein 27 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=VPS27 PE=3 SV=1
Length = 841
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKA 61
C PF+ RK H C G VFC + SS ++ +P R+CDNCF+K K+
Sbjct: 219 CYSPFSMLNRKHH-CRACGGVFCQTHSSNNIPLVNLGIM--EPVRVCDNCFAKYDKS 272
>sp|Q17TI5|BRX_ARATH Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2
Length = 344
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 236 KEVIKSLTAQLKDMAERLPVGTLRNIKSPTFTFFSSSP--------PSIDVSSRTGSNNL 287
KE +KSLT Q+KDMA + G + K T + SSSP P D +S
Sbjct: 29 KEAVKSLTIQIKDMALKF-SGAYKQCKPCTGS--SSSPLKKGHRSFPDYDNASEGVPYPF 85
Query: 288 LLSNGSST-------ASNRSSKQCQSEAATRNGS-RTKEGESSND--------NEWIEQD 331
+ + ST +S+ + + +S+ + G+ R S D EW+ Q
Sbjct: 86 MGGSAGSTPAWDFTNSSHHPAGRLESKFTSIYGNDRESISAQSCDVVLDDDGPKEWMAQV 145
Query: 332 DPGGYIALTSLPGGLNYLKRVRF 354
+PG +I SLP G N LKR+RF
Sbjct: 146 EPGVHITFASLPTGGNDLKRIRF 168
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 326 EWIEQDDPGGYIALTSLPGGLNYLKRVRF---RFMETR 360
EWIE+D+PG YI + L G L+RVRF RF E
Sbjct: 290 EWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFGEVH 327
>sp|Q960X8|HRS_DROME Hepatocyte growth factor-regulated tyrosine kinase substrate
OS=Drosophila melanogaster GN=Hrs PE=1 SV=1
Length = 760
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSKLRK 60
CR+ F F ++H+C N G VFC ++K+ P P K R+CD CF+ L++
Sbjct: 167 CRVEFT-FTNRKHHCRNCGQVFCGQCTAKQ------CPLPKYGIEKEVRVCDGCFAALQR 219
Query: 61 AFHTDDSSHSSVSRRGSINQGPNEFID 87
T S + R + ++ P E+++
Sbjct: 220 P--TSGSGGAKSGPRPADSELPAEYLN 244
>sp|Q9TZD0|LST2_CAEEL Lateral signaling target protein 2 OS=Caenorhabditis elegans
GN=lst-2 PE=2 SV=2
Length = 661
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 3 SGCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKAF 62
+ C +PFN F R+RH+C N G +FCH S + ++ R+C+ C+ +F
Sbjct: 573 TACSMPFN-FVRRRHHCRNCGRIFCHKCSCNTI--SIPEHGYDRKVRVCNLCYVHRLNSF 629
>sp|Q8BIJ7|RUFY1_MOUSE RUN and FYVE domain-containing protein 1 OS=Mus musculus GN=Rufy1
PE=1 SV=1
Length = 712
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKL 58
C F+ R++H+C N G +FC++ SS + P+ KP R+CD+C + L
Sbjct: 655 CEKDFS-ISRRKHHCRNCGHIFCNTCSSNEL----ALPSYPKPVRVCDSCHTLL 703
>sp|Q96T51|RUFY1_HUMAN RUN and FYVE domain-containing protein 1 OS=Homo sapiens GN=RUFY1
PE=1 SV=2
Length = 708
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKL 58
C F+ R++H+C N G +FC++ SS + P+ KP R+CD+C + L
Sbjct: 651 CEKEFS-ISRRKHHCRNCGHIFCNTCSSNEL----ALPSYPKPVRVCDSCHTLL 699
>sp|Q7XPT0|BRXL3_ORYSJ Putative protein Brevis radix-like 3 OS=Oryza sativa subsp.
japonica GN=BRXL3 PE=3 SV=2
Length = 213
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 51/186 (27%)
Query: 225 AGEETAKCKA---AKEVIKSLTAQLKDMAERLPVGTLRN-------IKSPTF-------- 266
GE+ ++ A ++ +KSLT+QLKDM + G+ ++ SP+F
Sbjct: 12 GGEDGSRGAATPHGRDAVKSLTSQLKDMVLKFS-GSNKHQHYKAATAGSPSFRSRSYRRP 70
Query: 267 --------TFFSSSPPSIDVSSRTGSNNLLLSNGSSTAS-------NRSSKQCQSEAATR 311
F +++ P + T + +ST+ ++S++ Q +A
Sbjct: 71 YPGFIDDSAFMTTTRPGGEAYMYTRAAPPPPVRAASTSMATWDMTRSKSNRGWQQDAGRS 130
Query: 312 NGSRTK----EGESSNDN----------EWIEQDDPGGYIALTSLPGGLNYLKRVRF--- 354
G T E E+ D+ EW Q +PG I +LPGG N LKR+RF
Sbjct: 131 PGGTTWIQSIEEEAGADDVTVVEDAVPREWTAQVEPGVQITFVTLPGGGNDLKRIRFSRE 190
Query: 355 RFMETR 360
RF E R
Sbjct: 191 RFGEDR 196
>sp|B4M140|LST2_DROVI Lateral signaling target protein 2 homolog OS=Drosophila virilis
GN=GJ23073 PE=3 SV=1
Length = 1052
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSKLRK 60
C+ PF F+R RH+C N G VFC S+ AP P K R+C C+ +R+
Sbjct: 981 CQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRECY--VRE 1031
Query: 61 AFHTDDSSHSSVSR 74
+ +HS SR
Sbjct: 1032 VRSSRTQAHSQASR 1045
>sp|Q6BSD6|VPS27_DEBHA Vacuolar protein sorting-associated protein 27 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=VPS27 PE=3 SV=2
Length = 732
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKAFHT 64
C PF+ RK H C + G V+C + SS + ++ +P R+CDNC+ K++ +
Sbjct: 196 CYNPFSLMNRKHH-CRSCGGVYCQTHSSHNSPLVALGIM--EPVRVCDNCYEKIK----S 248
Query: 65 DDSSHSSVSRR 75
+S H S R+
Sbjct: 249 KNSKHLSKVRQ 259
>sp|P52734|FGD1_MOUSE FYVE, RhoGEF and PH domain-containing protein 1 OS=Mus musculus
GN=Fgd1 PE=1 SV=2
Length = 960
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKA 61
C+ PFN+ ++RH+C G V C S +A + + N+ R+C +C+ L A
Sbjct: 738 CQEPFNSITKRRHHCKACGHVVCGKCSE---FRARLIYDNNRSNRVCTDCYVALHGA 791
>sp|Q6ZPK7|LST2_MOUSE Lateral signaling target protein 2 homolog OS=Mus musculus
GN=Zfyve28 PE=1 SV=2
Length = 905
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 3 SGCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN----KPYRICDNCFSKL 58
+ C+ PF +RK H+C + G +FC SS AP P KP R+C +C+
Sbjct: 842 TSCKAPFTVIRRK-HHCRSCGKIFCSRCSSHS------APLPRYGQVKPVRVCTHCYMFH 894
Query: 59 RKAFHTD 65
F++D
Sbjct: 895 VTPFYSD 901
>sp|Q9HCC9|LST2_HUMAN Lateral signaling target protein 2 homolog OS=Homo sapiens
GN=ZFYVE28 PE=1 SV=3
Length = 887
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 3 SGCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN----KPYRICDNCFSKL 58
+ C+ PF +RK H+C + G +FC SS AP P KP R+C +C+
Sbjct: 824 TACKAPFTVIRRK-HHCRSCGKIFCSRCSSHS------APLPRYGQVKPVRVCTHCYMFH 876
Query: 59 RKAFHTD 65
F++D
Sbjct: 877 VTPFYSD 883
>sp|Q96M96|FGD4_HUMAN FYVE, RhoGEF and PH domain-containing protein 4 OS=Homo sapiens
GN=FGD4 PE=1 SV=2
Length = 766
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 1 MRSGCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCF 55
M C+ PFN R+RH+C G V C S KA + + K ++C +C+
Sbjct: 564 MCMKCKEPFNALTRRRHHCRACGYVVCWKCSD---YKAQLEYDGGKLSKVCKDCY 615
>sp|B4IC49|LST2_DROSE Lateral signaling target protein 2 homolog OS=Drosophila sechellia
GN=GM10129 PE=3 SV=1
Length = 975
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Query: 4 GCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ AP P K R+C +C+ +
Sbjct: 903 ACQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRDCYVR 953
>sp|Q9VB70|LST2_DROME Lateral signaling target protein 2 homolog OS=Drosophila
melanogaster GN=CG6051 PE=1 SV=3
Length = 989
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Query: 4 GCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ AP P K R+C +C+ +
Sbjct: 917 ACQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRDCYVR 967
>sp|B3P851|LST2_DROER Lateral signaling target protein 2 homolog OS=Drosophila erecta
GN=GG12136 PE=3 SV=1
Length = 981
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Query: 4 GCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ AP P K R+C +C+ +
Sbjct: 909 ACQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRDCYVR 959
>sp|Q8BL66|EEA1_MOUSE Early endosome antigen 1 OS=Mus musculus GN=Eea1 PE=1 SV=2
Length = 1411
Score = 40.4 bits (93), Expect = 0.022, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 15 KRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLR 59
+RH+C G +FC S+K L P+ KP R+CD CF+ L+
Sbjct: 1370 RRHHCRQCGNIFCAECSTKNAL----TPSSKKPVRVCDACFNDLQ 1410
>sp|Q0P4S0|LST2_XENTR Lateral signaling target protein 2 homolog OS=Xenopus tropicalis
GN=zfyve28 PE=2 SV=1
Length = 951
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 3 SGCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN----KPYRICDNCFSKL 58
+ C+ PF +RK H+C + G +FC SS AP P KP R+C +C+
Sbjct: 888 TACKAPFTVIRRK-HHCRSCGKIFCSRCSSHS------APLPRYGQMKPVRVCTHCYMFH 940
Query: 59 RKAFHTD 65
F++D
Sbjct: 941 VTPFYSD 947
>sp|P98174|FGD1_HUMAN FYVE, RhoGEF and PH domain-containing protein 1 OS=Homo sapiens
GN=FGD1 PE=1 SV=2
Length = 961
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLR 59
C+ PFN+ ++RH+C G V C S +A + + N+ R+C +C+ L
Sbjct: 739 CQEPFNSITKRRHHCKACGHVVCGKCSE---FRARLVYDNNRSNRVCTDCYVALH 790
>sp|B4PRU6|LST2_DROYA Lateral signaling target protein 2 homolog OS=Drosophila yakuba
GN=GE10583 PE=3 SV=1
Length = 984
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Query: 4 GCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ AP P K R+C +C+ +
Sbjct: 912 ACQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRDCYVR 962
>sp|B4NFJ7|LST2_DROWI Lateral signaling target protein 2 homolog OS=Drosophila willistoni
GN=GK22512 PE=3 SV=1
Length = 993
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ AP P K R+C +C+++
Sbjct: 914 CQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRDCYAR 963
>sp|B4JHI7|LST2_DROGR Lateral signaling target protein 2 homolog OS=Drosophila grimshawi
GN=GH18624 PE=3 SV=1
Length = 1115
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSKLRK 60
C+ PF R+RH+C N G VFC S+ AP P K R+C CF + +
Sbjct: 1034 CQTPFT-VVRRRHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRECFMREVR 1086
Query: 61 AFHTDDSSHSSV 72
H+ S S +
Sbjct: 1087 QSHSHGQSQSQI 1098
>sp|Q15075|EEA1_HUMAN Early endosome antigen 1 OS=Homo sapiens GN=EEA1 PE=1 SV=2
Length = 1411
Score = 40.0 bits (92), Expect = 0.029, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 15 KRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLR 59
+RH+C G +FC S+K L P+ KP R+CD CF+ L+
Sbjct: 1370 RRHHCRQCGNIFCAECSAKNAL----TPSSKKPVRVCDACFNDLQ 1410
>sp|Q54IL5|UGT52_DICDI UDP-sugar-dependent glycosyltransferase 52 OS=Dictyostelium
discoideum GN=ugt52 PE=2 SV=1
Length = 1697
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 4 GCRLPFN--NFKRKRHNCYNYGMVFCHSSSSKKT-LKASMAPNPNKPYRICDNCFSKLR 59
GC+ PF + + R +C+ G +FC S +S K +K N P R+CD CF+ L+
Sbjct: 1630 GCKQPFTLLHVMKARVHCHCCGKIFCESCTSHKCPIKKYRI---NTPVRVCDKCFNDLQ 1685
>sp|B4G2G5|LST2_DROPE Lateral signaling target protein 2 homolog OS=Drosophila persimilis
GN=GL23610 PE=3 SV=1
Length = 1009
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ + AP P K R+C +C+ +
Sbjct: 926 CQTPFTAFRR-RHHCRNCGGVFCGVCSN------ATAPLPKYGLTKAVRVCRDCYVR 975
>sp|Q4P7Q1|VPS27_USTMA Vacuolar protein sorting-associated protein 27 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=VPS27 PE=3 SV=1
Length = 916
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSK 57
CR F F RK H+C N G VFC SS + + R+CD C+++
Sbjct: 185 CRTAFTTFNRK-HHCRNCGNVFCQQCSSHNMALSWFG--IGQDVRVCDGCYAR 234
>sp|P34657|YOTB_CAEEL Uncharacterized protein ZK632.12 OS=Caenorhabditis elegans
GN=ZK632.12 PE=1 SV=2
Length = 266
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 11 NFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKA 61
N ++RH+C N G V C + SS+ T + KP R+CD+CF L A
Sbjct: 167 NLVQRRHHCRNCGRVVCGACSSR-TFRIDNVHK--KPVRVCDHCFDSLSSA 214
>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens
GN=WDFY3 PE=1 SV=2
Length = 3526
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 3 SGCRLPFNNFKRKRHNCYNYGMVFCHS----SSSKKTLKASMAPNPNKPYRICDNCFSKL 58
SGC + F+ +RH+C N G +FC S K LK S P R+C NC+ L
Sbjct: 3461 SGCSVRFS-LTERRHHCRNCGQLFCQKCSRFQSEIKRLKIS------SPVRVCQNCYYNL 3513
Query: 59 RKAFHTDD 66
+ ++D
Sbjct: 3514 QHERGSED 3521
>sp|A0JMD2|LST2_DANRE Lateral signaling target protein 2 homolog OS=Danio rerio
GN=zfyve28 PE=2 SV=1
Length = 969
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 4 GCRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN----KPYRICDNCFSKLR 59
C+ PF +RK H+C + G +FC SS AP P KP R+C +C+
Sbjct: 907 ACKAPFTVIRRK-HHCRSCGKIFCSRCSSHS------APLPRYGQMKPVRVCTHCYMFHV 959
Query: 60 KAFHTD 65
F++D
Sbjct: 960 TPFYSD 965
>sp|Q8R4C2|RUFY2_MOUSE RUN and FYVE domain-containing protein 2 OS=Mus musculus GN=Rufy2
PE=1 SV=2
Length = 606
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN--KPYRICDNCFSKL 58
C F+ KRK H+C N G +FC++ S + P P+ KP R+CD+C + L
Sbjct: 549 CEKEFSLSKRK-HHCRNCGEIFCNACSDNEL------PLPSSPKPVRVCDSCHAML 597
>sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus
GN=Wdfy3 PE=1 SV=1
Length = 3508
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 3 SGCRLPFNNFKRKRHNCYNYGMVFCHS----SSSKKTLKASMAPNPNKPYRICDNCFSKL 58
SGC + F+ +RH+C N G +FC S K LK S P R+C NC+ L
Sbjct: 3443 SGCSVRFS-LTERRHHCRNCGQLFCQKCSRFQSEIKRLKIS------SPVRVCQNCYYSL 3495
Query: 59 R 59
+
Sbjct: 3496 Q 3496
>sp|Q6ZV73|FGD6_HUMAN FYVE, RhoGEF and PH domain-containing protein 6 OS=Homo sapiens
GN=FGD6 PE=1 SV=2
Length = 1430
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 15 KRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKAFH 63
+RH+C G + C + SS K + N+P R+C++CF +L+K H
Sbjct: 1240 RRHHCRACGKIVCQACSSNKY---GLDYLKNQPARVCEHCFQELQKLDH 1285
>sp|B3MT31|LST2_DROAN Lateral signaling target protein 2 homolog OS=Drosophila ananassae
GN=GF22946 PE=3 SV=1
Length = 985
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 11/57 (19%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ AP P K R+C C+ +
Sbjct: 913 CQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRECYVR 962
>sp|Q8WXA3|RUFY2_HUMAN RUN and FYVE domain-containing protein 2 OS=Homo sapiens GN=RUFY2
PE=1 SV=2
Length = 655
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKL 58
C F+ KRK H+C N G +FC++ S + P+ KP R+CD+C + L
Sbjct: 598 CEKEFSLSKRK-HHCRNCGEIFCNACSDNEL----PLPSSPKPVRVCDSCHALL 646
>sp|Q5R5R4|RUFY2_PONAB RUN and FYVE domain-containing protein 2 OS=Pongo abelii GN=RUFY2
PE=2 SV=1
Length = 606
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN--KPYRICDNCFSKL 58
C F+ KRK H+C N G +FC++ S + P P+ KP R+CD+C + L
Sbjct: 549 CEKEFSLSKRK-HHCRNCGEIFCNACSDNEL------PLPSSPKPVRVCDSCHALL 597
>sp|A2QWA2|VPS27_ASPNC Vacuolar protein sorting-associated protein 27 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=vps27 PE=3 SV=1
Length = 703
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 11/58 (18%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN----KPYRICDNCFSKL 58
CR PF+ F ++H+C N G VF SSK P P+ +P R+ D C++KL
Sbjct: 174 CRTPFS-FMNRKHHCRNCGSVFDAQCSSKSL------PLPHLGILQPVRVDDGCYAKL 224
>sp|A3LX75|VPS27_PICST Vacuolar protein sorting-associated protein 27 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=VPS27 PE=3 SV=2
Length = 732
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 5 CRLPFNNFK--RKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLR--- 59
C + ++ F ++H+C G VFC + SS S+ + KP R CDNC +K +
Sbjct: 193 CMICYDKFSMINRKHHCRACGGVFCQTHSSNFIPLVSLGIS--KPVRACDNCLAKQKSKN 250
Query: 60 KAFHTDDSSHS 70
K + SSHS
Sbjct: 251 KPSQHNSSSHS 261
>sp|B4K982|LST2_DROMO Lateral signaling target protein 2 homolog OS=Drosophila mojavensis
GN=GI24295 PE=3 SV=1
Length = 1051
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 11/57 (19%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNP----NKPYRICDNCFSK 57
C+ PF F+R RH+C N G VFC S+ AP P K R+C C+ +
Sbjct: 974 CQTPFTAFRR-RHHCRNCGGVFCGVCSNAS------APLPKYGLTKAVRVCRECYVR 1023
>sp|Q6CL17|VPS27_KLULA Vacuolar protein sorting-associated protein 27 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=VPS27 PE=3 SV=1
Length = 603
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 11/55 (20%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPN----KPYRICDNCF 55
C F RK H+C + G VFC SSK P P+ +P R+CDNCF
Sbjct: 180 CSTQFTLLNRK-HHCRSCGGVFCQLHSSK------FIPLPDLGIFEPVRVCDNCF 227
>sp|Q0V8S0|HGS_BOVIN Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos
taurus GN=HGS PE=2 SV=1
Length = 777
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 5 CRLPFNNFKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRK 60
CR+ F RK H+C G +FC SSK + K R+C+ CF +L K
Sbjct: 169 CRVQFGVMTRK-HHCRACGQIFCGKCSSKYSTIPKF--GIEKEVRVCEPCFEQLNK 221
>sp|Q755J9|VPS27_ASHGO Vacuolar protein sorting-associated protein 27 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=VPS27 PE=3 SV=1
Length = 604
Score = 38.5 bits (88), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 12 FKRKRHNCYNYGMVFCHSSSSKKTLKASMAPNPNKPYRICDNCFSKLRKAFH 63
F ++H+C + G +FC+ SS + M +P R+CDNC+ + H
Sbjct: 190 FLNRKHHCRSCGGIFCNEHSSHQLPLPEMG--ITEPVRVCDNCYDEYEIKKH 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,890,182
Number of Sequences: 539616
Number of extensions: 5585803
Number of successful extensions: 22370
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 21752
Number of HSP's gapped (non-prelim): 839
length of query: 368
length of database: 191,569,459
effective HSP length: 119
effective length of query: 249
effective length of database: 127,355,155
effective search space: 31711433595
effective search space used: 31711433595
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)