BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040123
(84 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 1 MERGSLFCVLRDDDEAIE-LNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXX 59
M GS+ LR+ E+ L+W KR I A L+YLH C ++HR
Sbjct: 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168
Query: 60 XXXEASVADFGTARLL 75
EA V DFG A+L+
Sbjct: 169 EEFEAVVGDFGLAKLM 184
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 1 MERGSLFCVLRDDDEA-IELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXX 59
M GS+ LR+ E+ L+W KR I A L+YLH C ++HR
Sbjct: 117 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 176
Query: 60 XXXEASVADFGTARLL 75
EA V DFG A+L+
Sbjct: 177 EEFEAVVGDFGLAKLM 192
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 4 GSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXE 63
G+L +++ D + W++RVS K +A ++YLH +++++HR
Sbjct: 92 GTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKN 146
Query: 64 ASVADFGTARLL 75
VADFG ARL+
Sbjct: 147 VVVADFGLARLM 158
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+ RGSL+ +L +L+ +R+S+ VA ++YLH+ +VHR
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDK 174
Query: 61 XXEASVADFGTARL 74
V DFG +RL
Sbjct: 175 KYTVKVCDFGLSRL 188
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+ RGSL+ +L +L+ +R+S+ VA ++YLH+ +VHR
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDK 174
Query: 61 XXEASVADFGTARL 74
V DFG +RL
Sbjct: 175 KYTVKVCDFGLSRL 188
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR +D + + V +++ +A + YL ++ VHR
Sbjct: 90 MENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNS 144
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
V+DFG +R L D+S+ T
Sbjct: 145 NLVCKVSDFGLSRFLEDDTSDPT 167
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 36.2 bits (82), Expect = 0.004, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR +D + + V +++ +A + YL ++ VHR
Sbjct: 116 MENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNS 170
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
V+DFG +R L D+S+ T
Sbjct: 171 NLVCKVSDFGLSRFLEDDTSDPT 193
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME G+L LR +D + + V +++ +A + YL +S VHR
Sbjct: 97 MENGALDSFLRLNDG--QFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNS 151
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
V+DFG +R L +SS+ T
Sbjct: 152 NLVCKVSDFGLSRFLEENSSDPT 174
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME G+L LR +D + + V +++ +A + YL +S VHR
Sbjct: 99 MENGALDSFLRLNDG--QFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNS 153
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
V+DFG +R L +SS+ T
Sbjct: 154 NLVCKVSDFGLSRFLEENSSDPT 176
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 33.1 bits (74), Expect = 0.039, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M GSL L D L+W R I + A+ +++LH + +HR
Sbjct: 106 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 162
Query: 61 XXEASVADFGTAR 73
A ++DFG AR
Sbjct: 163 AFTAKISDFGLAR 175
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 33.1 bits (74), Expect = 0.042, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M GSL L D L+W R I + A+ +++LH + +HR
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168
Query: 61 XXEASVADFGTAR 73
A ++DFG AR
Sbjct: 169 AFTAKISDFGLAR 181
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 33.1 bits (74), Expect = 0.044, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M GSL L D L+W R I + A+ +++LH + +HR
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168
Query: 61 XXEASVADFGTAR 73
A ++DFG AR
Sbjct: 169 AFTAKISDFGLAR 181
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 33.1 bits (74), Expect = 0.046, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR +D + + V +++ + + YL +S VHR
Sbjct: 112 MENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNS 166
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG +R+L D
Sbjct: 167 NLVCKVSDFGMSRVLEDD 184
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.050, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR D + + V +++ +A + YL + VHR
Sbjct: 128 MENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG AR+L D
Sbjct: 183 NLVCKVSDFGLARVLEDD 200
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 32.7 bits (73), Expect = 0.051, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 113 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 169
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 170 AGELKIADFGWS--VHAPSSRRT 190
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 32.7 bits (73), Expect = 0.060, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 144 AGELKIADFGWS--VHAPSSRRT 164
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 32.7 bits (73), Expect = 0.060, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 144 AGELKIADFGWS--VHAPSSRRT 164
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 32.3 bits (72), Expect = 0.061, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 144 AGELKIADFGWS--VHAPSSRRT 164
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 32.3 bits (72), Expect = 0.062, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 91 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 147
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 148 AGELKIADFGWS--VHAPSSRRT 168
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.3 bits (72), Expect = 0.062, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR +D + + V +++ + + YL +S VHR
Sbjct: 91 MENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNS 145
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG +R+L D
Sbjct: 146 NLVCKVSDFGMSRVLEDD 163
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.3 bits (72), Expect = 0.062, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR +D + + V +++ + + YL +S VHR
Sbjct: 97 MENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNS 151
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG +R+L D
Sbjct: 152 NLVCKVSDFGMSRVLEDD 169
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 32.3 bits (72), Expect = 0.062, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 104 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 160
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 161 AGELKIADFGWS--VHAPSSRRT 181
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 144 AGELKIADFGWS--VHAPSSRRT 164
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME G+L LR+ D E + + V +++ +A + YL ++ VHR
Sbjct: 128 MENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNS 182
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG +R+L D
Sbjct: 183 NLVCKVSDFGLSRVLEDD 200
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 146
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 147 AGELKIADFGWS--VHAPSSRRT 167
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 86 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 142
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 143 AGELKIADFGWS--VHAPSSRRT 163
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 92 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 148
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 149 AGELKIADFGWS--VHAPSSRRT 169
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 32.3 bits (72), Expect = 0.069, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 144 AGELKIADFGWS--VHAPSSRRT 164
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 32.3 bits (72), Expect = 0.069, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 144
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 145 AGELKIADFGWS--VHAPSSRRT 165
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.3 bits (72), Expect = 0.069, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 146
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 147 AGELKIADFGWS--VHAPSSRRT 167
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.3 bits (72), Expect = 0.071, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 84 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 140
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 141 AGELKIADFGWS--VHAPSSRRT 161
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 32.3 bits (72), Expect = 0.076, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 92 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 148
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 149 AGELKIADFGWS--VHAPSSRRT 169
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 32.3 bits (72), Expect = 0.077, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 92 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 148
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 149 AGELKIADFGWS--VHAPSSRRT 169
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.091, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR D + + V +++ +A + YL + VHR
Sbjct: 128 MENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINS 182
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG +R+L D
Sbjct: 183 NLVCKVSDFGLSRVLEDD 200
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 32.0 bits (71), Expect = 0.10, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 4 GSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXE 63
GSL L D L+W R I + A+ +++LH + +HR
Sbjct: 106 GSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFT 162
Query: 64 ASVADFGTAR 73
A ++DFG AR
Sbjct: 163 AKISDFGLAR 172
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 144
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + H SS RT
Sbjct: 145 AGELKIADFGWS--CHAPSSRRT 165
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + +A+ALSY H + V+HR
Sbjct: 91 LEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 147
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +ADFG + +H SS RT
Sbjct: 148 NGELKIADFGWS--VHAPSSRRT 168
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 1 MERGSLFCVLRDDD-EAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXX 59
ME G+L L D + ++W +R+ I A L YLH T +++HR
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLD 173
Query: 60 XXXEASVADFGTAR 73
+ DFG ++
Sbjct: 174 ENFVPKITDFGISK 187
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 1 MERGSLFCVLRDDD-EAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXX 59
ME G+L L D + ++W +R+ I A L YLH T +++HR
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLD 173
Query: 60 XXXEASVADFGTAR 73
+ DFG ++
Sbjct: 174 ENFVPKITDFGISK 187
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 113 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 169
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 170 AGELKIADFGWS--VHAPSSRR 189
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKKVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 144 AGELKIADFGWS--VHAPSSRR 163
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 30.8 bits (68), Expect = 0.22, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 146
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 147 AGELKIADFGWS--VHAPSSRR 166
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 30.8 bits (68), Expect = 0.22, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 144 AGELKIADFGWS--VHAPSSRR 163
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 146
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +A+FG + +H SS RT
Sbjct: 147 AGELKIANFGWS--VHAPSSRRT 167
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 89 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 145
Query: 61 XXEASVADFGTARLLHVDSSNRT 83
E +A+FG + +H SS RT
Sbjct: 146 AGELKIANFGWS--VHAPSSRRT 166
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 146
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 147 AGELKIADFGWS--VHAPSSRR 166
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 87 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 143
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 144 AGELKIADFGWS--VHAPSSRR 163
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 90 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 146
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 147 AGELKIADFGWS--VHAPSSRR 166
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 89 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 145
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 146 AGELKIADFGWS--VHAPSSRR 165
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 2 ERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDC-------TLSVVHRXXXXX 54
E+GSL L+ A ++W + I +++A L+YLH D ++ HR
Sbjct: 105 EKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160
Query: 55 XXXXXXXXEASVADFGTA 72
A +ADFG A
Sbjct: 161 NVLLKNNLTACIADFGLA 178
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + + +A+ALSY H + V+HR
Sbjct: 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 144
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 145 AGELKIADFGWS--VHAPSSRR 164
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 19 LNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVD 78
LNW ++ A +SYL + +VHR + DFG ARLL +D
Sbjct: 122 LNWCMQI------AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 172
Query: 79 SS 80
+
Sbjct: 173 ET 174
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR D + + V +++ V + YL L VHR
Sbjct: 132 MENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDS 186
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG +R+L D
Sbjct: 187 NLVCKVSDFGLSRVLEDD 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL LR D + + V +++ V + YL L VHR
Sbjct: 132 MENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDS 186
Query: 61 XXEASVADFGTARLLHVD 78
V+DFG +R+L D
Sbjct: 187 NLVCKVSDFGLSRVLEDD 204
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 30.0 bits (66), Expect = 0.39, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 85 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVSD 140
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 141 TLSCKIADFGLARLI 155
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 89 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 145 TLSCKIADFGLARLI 159
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 89 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 145 TLSCKIADFGLARLI 159
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 98 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 153
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 154 TLSCKIADFGLARLI 168
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 97 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 152
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 153 TLSCKIADFGLARLI 167
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 95 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 150
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 151 TLSCKIADFGLARLI 165
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 95 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 150
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 151 TLSCKIADFGLARLI 165
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 90 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 145
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 146 TLSCKIADFGLARLI 160
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 99 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 154
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 155 TLSCKIADFGLARLI 169
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 89 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 145 TLSCKIADFGLARLI 159
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 84 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 139
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 140 TLSCKIADFGLARLI 154
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 91 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 146
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 147 TLSCKIADFGLARLI 161
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 94 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 149
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 150 TLSCKIADFGLARLI 164
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
ME GSL L+ I+L K + + +A ++++ + +HR
Sbjct: 89 MENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 61 XXEASVADFGTARLL 75
+ADFG ARL+
Sbjct: 145 TLSCKIADFGLARLI 159
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 29.6 bits (65), Expect = 0.51, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
+E L V R+ + + + + + +A+ALSY H + V+HR
Sbjct: 91 LEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGS 147
Query: 61 XXEASVADFGTARLLHVDSSNR 82
E +ADFG + +H SS R
Sbjct: 148 NGELKIADFGWS--VHAPSSRR 167
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 28.9 bits (63), Expect = 0.70, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 8/62 (12%)
Query: 19 LNWTKRVSIVKSVAHALSYLHHDCTL--------SVVHRXXXXXXXXXXXXXEASVADFG 70
+ W + + ++++ LSYLH D S+ HR A +ADFG
Sbjct: 109 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFG 168
Query: 71 TA 72
A
Sbjct: 169 LA 170
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 260 MSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 315
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 316 NLVCKVADFGLARLI 330
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 260 MSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 315
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 316 NLVCKVADFGLARLI 330
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 260 MSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 315
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 316 NLVCKVADFGLARLI 330
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 343 MSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 398
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 399 NLVCKVADFGLARLI 413
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 87 MSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 142
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 143 NLVCKVADFGLARLI 157
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 84 MSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 139
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 140 NLVCKVADFGLARLI 154
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 94 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGE 149
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 150 NLVCKVADFGLARLI 164
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 83 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 138
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 139 NLVCKVADFGLARLI 153
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 94 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 149
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 150 NLVCKVADFGLARLI 164
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 94 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 149
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 150 NLVCKVADFGLARLI 164
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 94 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 149
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 150 NLVCKVADFGLARLI 164
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 94 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 149
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 150 NLVCKVADFGLARLI 164
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 85 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 140
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 141 NLVCKVADFGLARLI 155
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 94 MSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 149
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 150 NLVCKVADFGLARLI 164
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 91 MNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGE 146
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 147 NLVCKVADFGLARLI 161
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 1 MERGSLFCVLRDDDEAIELNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXX 60
M +GSL L+ + L + V + +A ++Y+ ++ VHR
Sbjct: 91 MNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGE 146
Query: 61 XXEASVADFGTARLL 75
VADFG ARL+
Sbjct: 147 NLVCKVADFGLARLI 161
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 116 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 161
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 118 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 119 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 123 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 117 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 144 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 146 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 31 VAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFGTARLLHVDS 79
+ AL YLH ++HR + DFGTA++L +S
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 25.8 bits (55), Expect = 6.9, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 19 LNWTKRVSIVKSVAHALSYLHHDCTLSVVHRXXXXXXXXXXXXXEASVADFG 70
+N + ++ SV ALSYLH+ V+HR ++DFG
Sbjct: 138 MNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFG 186
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,929,064
Number of Sequences: 62578
Number of extensions: 46678
Number of successful extensions: 349
Number of sequences better than 100.0: 110
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 340
Number of HSP's gapped (non-prelim): 110
length of query: 84
length of database: 14,973,337
effective HSP length: 52
effective length of query: 32
effective length of database: 11,719,281
effective search space: 375016992
effective search space used: 375016992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 45 (21.9 bits)