Your job contains 1 sequence.
>040125
MVYDFLFNTHKLYNDQRSNQAIGLQLGLSIVDCYPYLPMMSDNSAASSMMLQPRDQKRLK
RTISVADSIAGDGSPTSTLSRSSSSSSLSNLPRLQFRDHIWTYTQRYLAAEAVEEAAAAM
TKAVDGCGGDQQDGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQR
VASCFVQGLADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFV
ANSSILEAFEGESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVE
KFQSIGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKES
RGALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDT
KRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKMINQAQKWLK
NNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWKC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040125
(514 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 628 2.1e-61 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 622 9.0e-61 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 612 1.0e-59 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 353 1.4e-58 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 596 5.1e-58 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 590 2.2e-57 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 568 4.8e-55 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 568 4.8e-55 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 549 4.9e-53 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 532 3.1e-51 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 515 2.0e-49 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 509 8.5e-49 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 483 1.7e-45 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 473 8.8e-45 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 427 1.1e-44 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 472 1.7e-44 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 454 7.2e-43 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 447 3.2e-42 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 445 5.2e-42 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 444 6.6e-42 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 381 3.1e-35 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 370 4.6e-34 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 358 1.2e-32 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 355 1.8e-32 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 355 8.4e-32 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 200 1.4e-26 2
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 268 2.4e-20 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 262 8.8e-20 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 259 1.5e-19 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 259 2.7e-19 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 252 8.1e-19 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 238 2.7e-17 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 176 1.1e-12 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 138 1.5e-08 1
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 146/390 (37%), Positives = 227/390 (58%)
Query: 133 DGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADR 192
D +G+RLV L+ACAEAV + + A AL+ ++ A+ + ++VA+ F + LA R
Sbjct: 161 DSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARR 220
Query: 193 LASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGE 252
+ + +PS + +D + S + F YE CP+++F HF AN +ILEAF+G+
Sbjct: 221 IYRL---------SPSQSPIDHSLSDTLQMHF---YETCPYLKFAHFTANQAILEAFQGK 268
Query: 253 SFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGL-CVEKFQ---SIGDE 308
VHV+D M+ GL QW L+++LA R G PP R+T +G + F +G +
Sbjct: 269 KRVHVIDFSMSQGL----QWPALMQALALRPGGPPV-FRLTGIGPPAPDNFDYLHEVGCK 323
Query: 309 LKDYAKTYGINLEF-SVVESNLENLQTKDIKVLENEV--LVVNSILQLHCVVKESRGALN 365
L A+ + E+ V + L +L +++ +E+ + VNS+ +LH ++ GA++
Sbjct: 324 LAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRP-GAID 382
Query: 366 SVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKI 425
VL +++++ P++ +VEQ+S+HN P FL RF E+LHYYS +FDSL+ + P K +
Sbjct: 383 KVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGV-PSGQDK--VM 439
Query: 426 EQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM--KMINQAQKWLKNNK 483
+ Y ++I N+V+C+GP RVERHE + QWR R AGF AA + QA L
Sbjct: 440 SEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFN 499
Query: 484 VCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
EGY V E GCL+LGW ++P+IATS WK
Sbjct: 500 GGEGYRVEESDGCLMLGWHTRPLIATSAWK 529
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 145/385 (37%), Positives = 214/385 (55%)
Query: 133 DGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADR 192
D G+RLV L+ACAEAV + A AL+ + A + ++VA+ F +GLA R
Sbjct: 144 DSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARR 203
Query: 193 LASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGE 252
+ + P D+A S + YE CP+++F HF AN +ILE F
Sbjct: 204 IYRIYPRD------------DVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATA 251
Query: 253 SFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQSIGDELKDY 312
VHV+DLG+ GL QW LI++LA R PP R+T +G + Q +G +L
Sbjct: 252 EKVHVIDLGLNHGL----QWPALIQALALRPNGPPD-FRLTGIGYSLTDIQEVGWKLGQL 306
Query: 313 AKTYGINLEF-SVVESNLENLQTKDIKVLEN-EVLVVNSILQLHCVVKESRGALNSVLQI 370
A T G+N EF S+ +NL +L+ + + + E + VNS+ +LH ++ G+++ L
Sbjct: 307 ASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHP-GSIDKFLST 365
Query: 371 IHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYF 430
I + P ++ +VEQ+++HNG FL RF E+LHYYS++FDSL+ P D R E F
Sbjct: 366 IKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQD--RVMSELF-L 421
Query: 431 AEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM--KMINQAQKWLKNNKVCEGY 488
+I N+V+CEG RVERHE ++QWR R GF+ + QA L +GY
Sbjct: 422 GRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGY 481
Query: 489 TVVEEKGCLVLGWKSKPIIATSCWK 513
V E +GCL+LGW+++P+IATS W+
Sbjct: 482 NVEENEGCLLLGWQTRPLIATSAWR 506
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 141/390 (36%), Positives = 216/390 (55%)
Query: 133 DGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADR 192
D +G+RLV L+ACAEA+ + + A AL+ ++ A+ + ++VA+ F + LA R
Sbjct: 213 DSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARR 272
Query: 193 LASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGE 252
+ + P P N +D S + F YE CP+++F HF AN +ILEAFEG+
Sbjct: 273 IYRLSP--------PQ-NQIDHCLSDTLQMHF---YETCPYLKFAHFTANQAILEAFEGK 320
Query: 253 SFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCV----EKFQSIGDE 308
VHV+D M GL QW L+++LA R G PP R+T +G + +G +
Sbjct: 321 KRVHVIDFSMNQGL----QWPALMQALALREGGPPT-FRLTGIGPPAPDNSDHLHEVGCK 375
Query: 309 LKDYAKTYGINLEF-SVVESNLENLQTK--DIKVLENEVLVVNSILQLHCVVKESRGALN 365
L A+ + E+ V ++L +L +++ + E + VNS+ +LH ++ G +
Sbjct: 376 LAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRP-GGIE 434
Query: 366 SVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKI 425
VL ++ ++ P + +VEQ+S+HNGP FL RF E+LHYYS +FDSL+ + P K +
Sbjct: 435 KVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGV-PNSQDK--VM 491
Query: 426 EQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM--KMINQAQKWLKNNK 483
+ Y ++I N+V+CEGP RVERHE + QW R +G A + QA L
Sbjct: 492 SEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFN 551
Query: 484 VCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
+GY V E GCL+LGW ++P+I TS WK
Sbjct: 552 SGQGYRVEESNGCLMLGWHTRPLITTSAWK 581
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 353 (129.3 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 67/157 (42%), Positives = 101/157 (64%)
Query: 360 SRGALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 419
S G +S L I LSPKV+V+ EQDS HNG + R +E+L+ Y+A+FD L+ +P+
Sbjct: 325 SSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTS 384
Query: 420 TKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKM--INQAQK 477
R K+E+ F EEIKNI+SCEG R ERHE++++W +R+ AGF P+ + QA++
Sbjct: 385 QDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARR 444
Query: 478 WLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWKC 514
L+ +GY + EE GC V+ W+ +P+ + S W+C
Sbjct: 445 LLQGCGF-DGYRIKEESGCAVICWQDRPLYSVSAWRC 480
Score = 266 (98.7 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 72/219 (32%), Positives = 113/219 (51%)
Query: 138 GMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQ 197
G+ L+ LL+ CA VA +A+A L +L A G + QR+A+ F + LA+R+
Sbjct: 51 GLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSW 110
Query: 198 PLGAVGSFAPSMNIMDIAGSREKEEAF--RLVYEICPHIQFGHFVANSSILEAFEGESFV 255
P G + ++N + EE RL +E+ P ++ + + N +ILEA EGE V
Sbjct: 111 P----GLYK-ALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMV 165
Query: 256 HVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQSIGDELKDYAKT 315
HV+DL + QW L+++ +R PP LRIT V E + + L + A+
Sbjct: 166 HVIDLDAS----EPAQWLALLQAFNSRPEGPPH-LRITGVHHQKEVLEQMAHRLIEEAEK 220
Query: 316 YGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLH 354
I +F+ V S L+ L + ++V E L V+S+LQLH
Sbjct: 221 LDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLH 259
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 143/385 (37%), Positives = 216/385 (56%)
Query: 138 GMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQ 197
G+RLVQ L+ACAEAV + S A AL+ + A + +VA+ F + LA R+ +
Sbjct: 154 GVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRIH 213
Query: 198 PLGAVGSFAPSMNIMDIAGSREKEEAFRL-VYEICPHIQFGHFVANSSILEAFEGESFVH 256
P A + PS EE ++ Y+ CP+++F HF AN +ILEA VH
Sbjct: 214 PSAA--AIDPSF-----------EEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVH 260
Query: 257 VVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCV--EKFQSIGDELKDYAK 314
V+DLG+ +G QW L+++LA R G PP R+T VG E Q +G +L A+
Sbjct: 261 VIDLGLN----QGMQWPALMQALALRPGGPPS-FRLTGVGNPSNREGIQELGWKLAQLAQ 315
Query: 315 TYGINLEFS-VVESNLENLQTKDIKV-LENEVLVVNSILQLHCVVKESRGALNSVLQIIH 372
G+ +F+ + L +L+ + E+E LVVNS+ +LH V+ + G++ +L +
Sbjct: 316 AIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQP-GSIEKLLATVK 374
Query: 373 ELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLD--AMLPKYDTKRAKIEQFYF 430
+ P ++ +VEQ+++HNG FL RF EALHYYS++FDSL+ ++P D +++ Y
Sbjct: 375 AVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEV---YL 431
Query: 431 AEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM--KMINQAQKWLKNNKVCEGY 488
+I N+V+ EG R+ERHE + QWR+RM AGF + QA L + +GY
Sbjct: 432 GRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGY 491
Query: 489 TVVEEKGCLVLGWKSKPIIATSCWK 513
V E G L+L W++KP+IA S WK
Sbjct: 492 RVEENDGSLMLAWQTKPLIAASAWK 516
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 141/392 (35%), Positives = 214/392 (54%)
Query: 133 DGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADR 192
D G+RLV L+ACAEA+ + + A AL+ + A + +VA+ F Q LA R
Sbjct: 172 DSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARR 231
Query: 193 LASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRL-VYEICPHIQFGHFVANSSILEAFEG 251
+ + ++ A + EE + YE CP+++F HF AN +ILEA
Sbjct: 232 IYR--------DYTAETDVC-AAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTT 282
Query: 252 ESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCV----EKFQSIGD 307
VHV+DLG+ +G QW L+++LA R G PP R+T +G + Q +G
Sbjct: 283 ARRVHVIDLGLN----QGMQWPALMQALALRPGGPPS-FRLTGIGPPQTENSDSLQQLGW 337
Query: 308 ELKDYAKTYGINLEFS-VVESNLENLQTKDIKVL-ENEVLVVNSILQLHCVVKESRGALN 365
+L +A+ G+ EF + +L +L+ + + E+E LVVNS+ +LH ++ S G++
Sbjct: 338 KLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARS-GSIE 396
Query: 366 SVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAM--LPKYDTKRA 423
+L + + P ++ +VEQ+++HNG FL RF EALHYYS++FDSL+ LP D +
Sbjct: 397 KLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMS 456
Query: 424 KIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM--KMINQAQKWLKN 481
++ Y +I N+V+ EG RVERHE QWR RM AGF + QA L
Sbjct: 457 EV---YLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSL 513
Query: 482 NKVCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
+GY V E GCL++GW+++P+I TS WK
Sbjct: 514 YATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 131/379 (34%), Positives = 209/379 (55%)
Query: 145 LIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQPLGAVGS 204
L++CA+A++ D A +++ +LR V G QR+ + ++GL +LAS G+ S
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASS---GS--S 177
Query: 205 FAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVDLGMTL 264
++N S E ++YE+CP+ +FG+ AN +I EA + E+ VH++D +
Sbjct: 178 IYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDF--QI 235
Query: 265 GLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQS------IGDELKDYAKTYGI 318
G +G QW LI++ A R G PPR +RIT + + +G+ L AK + +
Sbjct: 236 G--QGSQWVTLIQAFAARPGGPPR-IRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNV 292
Query: 319 NLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKESRGALNS---VLQIIHELS 375
EF+ V ++ ++ K++ V E L VN LH + ES N +L+++ LS
Sbjct: 293 PFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLS 352
Query: 376 PKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIK 435
PKV+ LVEQ+S+ N F RFME ++YY+A+F+S+D LP+ +R +EQ A ++
Sbjct: 353 PKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVV 412
Query: 436 NIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMK-MINQAQKWLKNNKVCEGYTVVEEK 494
NI++CEG RVERHE + +WR R AGF P+ ++N K L N + Y + E
Sbjct: 413 NIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRN-YSDKYRLEERD 471
Query: 495 GCLVLGWKSKPIIATSCWK 513
G L LGW + ++A+ WK
Sbjct: 472 GALYLGWMHRDLVASCAWK 490
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 138/383 (36%), Positives = 213/383 (55%)
Query: 131 QQDGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLA 190
+Q +G+ L+ LL+ CAEAV+ + A+ LL E+ + +G+S QRVA+ F + ++
Sbjct: 280 RQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMS 339
Query: 191 DRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFE 250
RL + LG + PS M S + AF++ I P ++F HF AN +I EAFE
Sbjct: 340 ARLLN-SCLGIYAAL-PS-RWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFE 396
Query: 251 GESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQSIGDELK 310
E VH++DL + GL QW L LA+R G PP +R+T +G +E Q+ G L
Sbjct: 397 KEDSVHIIDLDIMQGL----QWPGLFHILASRPGGPPH-VRLTGLGTSMEALQATGKRLS 451
Query: 311 DYAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKESRGALNSVLQI 370
D+A G+ EF + + NL T+ + V + E + V+ LQ H + + G+ L +
Sbjct: 452 DFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHW-LQ-HSLY-DVTGSDAHTLWL 508
Query: 371 IHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYF 430
+ L+PKV+ +VEQD SH G F LGRF+EA+HYYSA+FDSL A + +R +EQ
Sbjct: 509 LQRLAPKVVTVVEQDLSHAGSF-LGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLL 567
Query: 431 AEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKMINQAQKWLKNNKV-CEGYT 489
++EI+N+++ GP+R + + WR +M + GF+ + Q L +GYT
Sbjct: 568 SKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYT 626
Query: 490 VVEEKGCLVLGWKSKPIIATSCW 512
+V++ G L LGWK ++ S W
Sbjct: 627 LVDDNGTLKLGWKDLSLLTASAW 649
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 136/383 (35%), Positives = 208/383 (54%)
Query: 143 QLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQPLGAV 202
Q+LI+CA A++ A ++++ELR + G QR+A+ V+GLA R+A A
Sbjct: 224 QILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMA------AS 277
Query: 203 GSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVDLGM 262
G F S E+ A ++++E+CP +FG AN +ILEA +GE VH++D +
Sbjct: 278 GKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDI 337
Query: 263 TLGLPRGQQWRRLIESLANRAGQPPRRLRITAVG--LCVEK----FQSIGDELKDYAKTY 316
+G Q+ LI S+A G+ PR LR+T + V++ + IG L+ A+
Sbjct: 338 N----QGNQYMTLIRSIAELPGKRPR-LRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDN 392
Query: 317 GINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKESRGALNS---VLQIIHE 373
G++ +F + S + + E L+VN QLH + ES +N +L ++
Sbjct: 393 GVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKS 452
Query: 374 LSPKVLVLVEQDSSHN-GPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAE 432
L+PK++ +VEQD + N PFF RF+EA YYSA+F+SLD LP+ +R +E+ A
Sbjct: 453 LNPKLVTVVEQDVNTNTSPFF-PRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLAR 511
Query: 433 EIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM--KMINQAQKWLKNNKVCEGYTV 490
+I NIV+CEG R+ER+E +WR RM AGF PM K+ N Q +K + C Y +
Sbjct: 512 DIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQ-QYCNKYKL 570
Query: 491 VEEKGCLVLGWKSKPIIATSCWK 513
EE G L W+ K +I S W+
Sbjct: 571 KEEMGELHFCWEEKSLIVASAWR 593
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 132/378 (34%), Positives = 201/378 (53%)
Query: 144 LLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQPLGAVG 203
+L+ACA+AV+ + A + ELR + G QR+ + ++GL RLA A G
Sbjct: 53 VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLA------ASG 106
Query: 204 SFAPSMNIMDIAGSREKE--EAFRLVY---EICPHIQFGHFVANSSILEAFEGESFVHVV 258
S +I SRE E E VY E+CP+ +FG+ AN +I EA + E +H++
Sbjct: 107 S-----SIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHII 161
Query: 259 DLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQSIGDELKDYAKTYGI 318
D +G +G QW LI++ A R G P +RIT VG ++ L+ AK + +
Sbjct: 162 DF--QIG--QGSQWIALIQAFAARPGGAPN-IRITGVG-DGSVLVTVKKRLEKLAKKFDV 215
Query: 319 NLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKESRGALNS---VLQIIHELS 375
F+ V ++ +++ V + E L VN LH + ES N +L+++ LS
Sbjct: 216 PFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLS 275
Query: 376 PKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIK 435
PKV+ LVEQ+ + N FL RF+E L YY+A+F+S+D MLP+ +R IEQ A ++
Sbjct: 276 PKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVV 335
Query: 436 NIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKMINQAQKWLKNNKVCEGYTVVEEKG 495
NI++CEG R+ERHE + +W+ R S AGF+ P+ I A GY + E G
Sbjct: 336 NIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDG 395
Query: 496 CLVLGWKSKPIIATSCWK 513
L LGW + ++++ WK
Sbjct: 396 ALYLGWMDRILVSSCAWK 413
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 130/380 (34%), Positives = 200/380 (52%)
Query: 144 LLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQPLGAVG 203
+L CA+AV D L+S+L+ V G QR+ + ++GL RLAS G+
Sbjct: 230 VLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASS---GS-- 284
Query: 204 SFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVDLGMT 263
S ++ D G E ++YE CP+ +FG+ AN +I EA + ESFVH++D ++
Sbjct: 285 SIYKALRCKDPTGP-ELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQIS 343
Query: 264 LGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKF------QSIGDELKDYAKTYG 317
+G QW LI +L R G PP +RIT + F + +G L A+ G
Sbjct: 344 ----QGGQWVSLIRALGARPGGPPN-VRITGIDDPRSSFARQGGLELVGQRLGKLAEMCG 398
Query: 318 INLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKESRGALNS---VLQIIHEL 374
+ EF ++ + + V E L VN L LH + ES N +L+++ L
Sbjct: 399 VPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHL 458
Query: 375 SPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEI 434
SP V+ LVEQ+++ N FL RF+E +++Y A+F+S+D L + +R +EQ A E+
Sbjct: 459 SPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREV 518
Query: 435 KNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKM-INQAQKWLKNNKVCEGYTVVEE 493
N+++CEG R ERHE + +WR R AGF+ P+ +N K L + E YT+ E
Sbjct: 519 VNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLES-YSEKYTLEER 577
Query: 494 KGCLVLGWKSKPIIATSCWK 513
G L LGWK++P+I + W+
Sbjct: 578 DGALYLGWKNQPLITSCAWR 597
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 136/386 (35%), Positives = 203/386 (52%)
Query: 131 QQDGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLA 190
+ DG A ++L+ LL+ CAE VA AS LLSE+ FGSS +RV + F Q L
Sbjct: 31 ENDGAA-AIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQ 89
Query: 191 DRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFE 250
R+ S GA S + + S++ A + + P I+F HF AN +I +A +
Sbjct: 90 TRVISSYLSGACSPL--SEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALD 147
Query: 251 GESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQSIGDELK 310
GE VH++DL + GL QW L LA+R + R +RIT G + S G L
Sbjct: 148 GEDSVHIIDLDVMQGL----QWPALFHILASRP-RKLRSIRITGFGSSSDLLASTGRRLA 202
Query: 311 DYAKTYGINLEFSVVESNLENL-QTKDIKVLENEVLVVNSILQLHCVVKESRGALNSVLQ 369
D+A + + EF +E + NL + + E +VV+ +Q H + + L + L+
Sbjct: 203 DFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHW-MQ-HRLYDVTGNNLET-LE 259
Query: 370 IIHELSPKVLVLVEQDSSHN-GPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQF 428
I+ L P ++ +VEQ+ S++ G FLGRF+EALHYYSA+FD+L L + +R +EQ
Sbjct: 260 ILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQI 319
Query: 429 YFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKMINQAQKWLKNNKV-CEG 487
EI+NIV+ G R +R+ +W+ +SR GF+ ++ Q L + G
Sbjct: 320 VLGTEIRNIVAHGGG----RRKRM-KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNG 374
Query: 488 YTVVEEKGCLVLGWKSKPIIATSCWK 513
YT+VEE G L LGWK ++ S WK
Sbjct: 375 YTLVEENGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 483 (175.1 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 122/394 (30%), Positives = 203/394 (51%)
Query: 130 DQQDGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGL 189
D + TAD L LL+ CA+AV+ D+ A+ +L ++R ++ G+ +R+A F L
Sbjct: 385 DSKKETAD---LRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSL 441
Query: 190 ADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAF 249
RLA G A S A + +A++ +CP + AN S++
Sbjct: 442 EARLAGT---GTQIYTALSSKKTSAA---DMLKAYQTYMSVCPFKKAAIIFANHSMMRFT 495
Query: 250 EGESFVHVVDLGMTLGLPRGQQWRRLIESLA-NRAGQPPRRLRITAVGLCVEKF------ 302
+ +H++D G++ G QW LI L+ +R G P+ LRIT + L F
Sbjct: 496 ANANTIHIIDFGISYGF----QWPALIHRLSLSRPGGSPK-LRITGIELPQRGFRPAEGV 550
Query: 303 QSIGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKES-- 360
Q G L Y + + + E++ + E +Q +D+K+ + E +VVNS+ + ++ E+
Sbjct: 551 QETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVL 610
Query: 361 -RGALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 419
++VL++I +++P V + ++N PFF+ RF EAL +YSA+FD D+ L + D
Sbjct: 611 VNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLARED 670
Query: 420 TKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM-KMINQAQKW 478
R E+ ++ EI N+V+CEG RVER E QW+ R+ RAGF+ P+ K + Q K
Sbjct: 671 EMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKL 730
Query: 479 LKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCW 512
N + + V + L+ GWK + + A+S W
Sbjct: 731 KIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLW 764
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 473 (171.6 bits), Expect = 8.8e-45, P = 8.8e-45
Identities = 121/387 (31%), Positives = 201/387 (51%)
Query: 144 LLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLASVQPLGAVG 203
LL CA++V+ DK A LL ++R G + QR+A F L RL G+ G
Sbjct: 318 LLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLE-----GSTG 372
Query: 204 SFAPSMNIMDIAGSREKEEA-----FRLVYEICPHIQFGHFVANSSILEAFEGESFVHVV 258
+ S D S+++ A + + P + +F +N IL+A + S +H+V
Sbjct: 373 TMIQSY--YDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIV 430
Query: 259 DLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAV-----GLC-VEKFQSIGDELKDY 312
D G+ G QW I+ L+ ++ R+LRIT + GL E+ Q G L +Y
Sbjct: 431 DFGILYGF----QWPMFIQHLS-KSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEY 485
Query: 313 AKTYGINLEFSVVES-NLENLQTKDIKVLENEVLVVNSILQ---LHCVVK-ESRGALNSV 367
K +G+ E++ + S N E ++ ++ K+ NEVL VN++L+ L V+ E +
Sbjct: 486 CKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGF 545
Query: 368 LQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQ 427
L++I +++P V + + S N PFF RF EAL +YSA+FD A L K + +R E
Sbjct: 546 LKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEG 605
Query: 428 FYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMK--MINQAQKWLKNNKVC 485
++ E+ N+++CEG RVER E QW+ RM RAGF+ P++ ++ ++ +K
Sbjct: 606 EFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYH 665
Query: 486 EGYTVVEEKGCLVLGWKSKPIIATSCW 512
+ + + E+ + GWK + + ++SCW
Sbjct: 666 KDFVLDEDSNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 427 (155.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 99/299 (33%), Positives = 161/299 (53%)
Query: 229 EICPHIQFGHFVANSSILEAFE--GESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQP 286
++ P I+FGH AN +IL+A E +H++DL ++ GL QW L+++LA R+ P
Sbjct: 151 QLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGL----QWPPLMQALAERSSNP 206
Query: 287 ---PRRLRITAVGLCVEKFQSIGDELKDYAKTYGINLEFS---VVESNLENL--QTK--D 336
P LRIT G V GD L +A + G+ +F +VE +L L Q +
Sbjct: 207 SSPPPSLRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLA 266
Query: 337 IKVLENEVLVVNSILQLHCVVKESRGALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGR 396
+ ++ E + VN + LH + + + L I L+ +++ + E++++H FL R
Sbjct: 267 LSAVQGETIAVNCVHFLHKIFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNR 326
Query: 397 FMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWR 456
F EA+ +Y AIFDSL+A LP +R +EQ +F +EI ++V+ E R +RH R + W
Sbjct: 327 FSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWE 386
Query: 457 RRMSRAGFQAAPMKM--INQAQKWLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
M R GF P+ ++QA+ L+ + EGY + L LGW+++P+ + S WK
Sbjct: 387 EMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 60 (26.2 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 127 CGGDQQDGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFV 186
C T+ L +LL A V+ + + A LLS L N+ G S +R+ F
Sbjct: 27 CIASSSAATSASHHLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFT 86
Query: 187 QGLADRL 193
+ L+ R+
Sbjct: 87 KALSVRI 93
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 472 (171.2 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 119/396 (30%), Positives = 196/396 (49%)
Query: 128 GGDQQDGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQ 187
GG Q+G + + L LLI CA+AVA D+ A LL ++R ++ FG QR+A CF
Sbjct: 331 GGGGQNGKKEVVDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFAN 390
Query: 188 GLADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILE 247
GL RLA GS + + +A +L CP + +F+ N +I +
Sbjct: 391 GLEARLAGT------GSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRD 444
Query: 248 AFEGESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAV-----GLC-VEK 301
VHV+D G+ G QW LI + G P ++RIT + G ++
Sbjct: 445 LVGNSQRVHVIDFGILYGF----QWPTLIHRFS-MYGSP--KVRITGIEFPQPGFRPAQR 497
Query: 302 FQSIGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKES- 360
+ G L YAK +G+ E+ + + +Q +D+ + +E+ VVN + + + ES
Sbjct: 498 VEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESV 557
Query: 361 --RGALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKY 418
++VL +I +++P + V + ++N PFF+ RF EAL ++S+IFD L+ ++P+
Sbjct: 558 KVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPRE 617
Query: 419 DTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMK-MINQAQK 477
D +R +E F E N+++CEG RVER E QW R R+G P I +
Sbjct: 618 DEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSL 677
Query: 478 WLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
+ + + + ++ L+ GWK + ++A S WK
Sbjct: 678 HKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWK 713
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 454 (164.9 bits), Expect = 7.2e-43, P = 7.2e-43
Identities = 119/388 (30%), Positives = 189/388 (48%)
Query: 141 LVQLLIACAEAVACRDKSHASALLSELRANALVFGSS-FQRVASCFVQGLADRLASVQPL 199
LV LL C +A+ R+ + + ++ A G + R+ + +++ LA R+A + P
Sbjct: 274 LVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWP- 332
Query: 200 GAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVD 259
+ AP D E A R + ++ P +F HF AN +L AFEG+ VH++D
Sbjct: 333 -HIFHIAPPREF-DRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIID 390
Query: 260 LGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQSIGDELKDYAKTYGIN 319
+ GL QW +SLA+R PP +RIT +G + GD L +A+ +
Sbjct: 391 FDIKQGL----QWPSFFQSLASRIN-PPHHVRITGIGESKLELNETGDRLHGFAEAMNLQ 445
Query: 320 LEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKESRGA-LNSVLQIIHELSPKV 378
EF V LE+++ + V E E + VN ++Q+H + + GA + L +I +P
Sbjct: 446 FEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIA 505
Query: 379 LVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIV 438
LVL EQ++ HN R +L YYSA+FD++ L R K+E+ F EI+NIV
Sbjct: 506 LVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIV 565
Query: 439 SCEGPARVERHERVDQWRRRMSRAGFQAAPM--KMINQAQKWLKN-NKVCEGYTVVEEK- 494
+CEG R ERH WRR + + GF++ + + + Q++ L+ EG+ VE
Sbjct: 566 ACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSD 625
Query: 495 ----------GCLVLGWKSKPIIATSCW 512
G + L W +P+ S W
Sbjct: 626 EDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 118/388 (30%), Positives = 192/388 (49%)
Query: 141 LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRLA-SVQPL 199
L LL CA+AVA D+ A+ L E+RA++ G QR+A F + L R+ ++ P
Sbjct: 224 LRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISP- 282
Query: 200 GAVGSFAPSM--NIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGESFVHV 257
V + PS +++DI +A++L CP +F AN SI E + +H+
Sbjct: 283 -PVSNPFPSSTTSMVDIL------KAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHI 335
Query: 258 VDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKF------QSIGDELKD 311
VD G+ G QW L+ +L+ R G PP LR+T + L F + G LK
Sbjct: 336 VDFGVLYGF----QWPCLLRALSKRPGGPPM-LRVTGIELPQAGFRPSDRVEETGRRLKR 390
Query: 312 YAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKES---RGALNSVL 368
+ + + EF+ + E + ++ + E VVN I +L E+ ++VL
Sbjct: 391 FCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVL 450
Query: 369 QIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDT--KRAKIE 426
++ +++P + V E + +N PFF+ RF EAL +YS++FD D + D R+ +E
Sbjct: 451 KLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLE 510
Query: 427 QFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM-KMINQAQKWLKNNKVC 485
+ + +++SCEG R R E QWR R+ RAGF+ A + K I + K + +
Sbjct: 511 RELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYH 570
Query: 486 EGYTVVEEKGCLVLGWKSKPIIATSCWK 513
+ + + ++ GWK + I A SCWK
Sbjct: 571 RDFVIDSDNNWMLQGWKGRVIYAFSCWK 598
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 119/396 (30%), Positives = 205/396 (51%)
Query: 130 DQQDGTAD-GMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQG 188
D +D D L++ + CA ++ D + AS L ++R + G +RVA F +
Sbjct: 205 DSEDDDFDLEPPLLKAIYDCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEA 263
Query: 189 LADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEA 248
L++RL+ P A S + S D+ S ++ + + CP+ +F H AN +ILEA
Sbjct: 264 LSNRLSPNSP--ATSSSSSSTE--DLILS------YKTLNDACPYSKFAHLTANQAILEA 313
Query: 249 FEGESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAV-----GLCVE-KF 302
E + +H+VD G+ G+ QW L+++LA R P ++R++ + G E
Sbjct: 314 TEKSNKIHIVDFGIVQGI----QWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSL 369
Query: 303 QSIGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQLHCVVKESRG 362
+ G+ L+D+AK +N +F + + + L +V +EVL VN +LQL+ ++ E+
Sbjct: 370 IATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPT 429
Query: 363 ALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKR 422
+++ L++ L+P+V+ L E + S N F R AL +YSA+F+SL+ L + +R
Sbjct: 430 IVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEER 489
Query: 423 AKIEQFYFAEEIKNIVSCE--GPARVERHERVDQWRRRMSRAGFQAAPMK--MINQAQKW 478
++E+ F I ++ E G R ER E +QWR M AGF++ + ++QA+
Sbjct: 490 VRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKIL 548
Query: 479 LKNNKVCEGYTVVEEK-GCLVLGWKSKPIIATSCWK 513
L N Y++VE K G + L W P++ S W+
Sbjct: 549 LWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 117/407 (28%), Positives = 201/407 (49%)
Query: 121 TKAVDGCGGDQQDGTADG-MRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQ 179
T+ V G + +D + + LL+ CA+AVA D+ A L E+R ++ G + Q
Sbjct: 188 TRHVKGSSNRYKQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQ 247
Query: 180 RVASCFVQGLADRLASVQ--PLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFG 237
R+ F + L R+ P+ A S ++I+ +A++ + CP +
Sbjct: 248 RLGYHFAEALEARITGTMTTPISATSSRTSMVDIL---------KAYKGFVQACPTLIMC 298
Query: 238 HFVANSSILEAFEGESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGL 297
+F AN +I E + +H++D G+ G QW LI++L+ R PP LR+T + L
Sbjct: 299 YFTANRTINELASKATTLHIIDFGILYGF----QWPCLIQALSKRDIGPPL-LRVTGIEL 353
Query: 298 CV------EKFQSIGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSIL 351
E+ + G LK + + + E+S + N EN+ D+ + E VVN IL
Sbjct: 354 PQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCIL 413
Query: 352 QLHCVVKESRGALNS----VLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAI 407
+L E+ +LNS L++ +++P + V E + ++N PFFL RF EAL + S++
Sbjct: 414 RLQYTPDETV-SLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSL 472
Query: 408 FDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAA 467
FD + L + D R +E+ + ++++CEG R R E QW+ R+ RAGF+ A
Sbjct: 473 FDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPA 532
Query: 468 PM-KMINQAQKWLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
+ K I + K + + + + + + + GWK + + A SCWK
Sbjct: 533 KLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 579
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 93/305 (30%), Positives = 164/305 (53%)
Query: 223 AFRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVDLGMTLGLPRGQQWRRLIESLANR 282
+++ + + CP+ +F H AN +ILEA + +H+VD G+ G+ QW L+++LA R
Sbjct: 242 SYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGI----QWSALLQALATR 297
Query: 283 AGQPPRRLRITAV---GLCVEKFQSI---GDELKDYAKTYGINLEFSVVESNLENLQTKD 336
+ P R+RI+ + L S+ G+ L+D+A +N EF V + ++ L
Sbjct: 298 SSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSS 357
Query: 337 IKVLENEVLVVNSILQLHCVVKESRGALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGR 396
+V +EVLVVN +L+L+ ++ E+ + + L++ L+P+++ L E + S N F R
Sbjct: 358 FRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANR 417
Query: 397 FMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEG----PA-RVERHER 451
+L +YSA+F+SL+ L + +R ++E+ F I ++V + P R E
Sbjct: 418 VKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEE 477
Query: 452 VDQWRRRMSRAGFQAA-PMKM-INQAQKWLKNNKVCEGYTVVE-EKGCLVLGWKSKPIIA 508
+QWR M +AGF+ P ++QA+ L N Y++VE E G + L W + P++
Sbjct: 478 KEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLT 537
Query: 509 TSCWK 513
S W+
Sbjct: 538 VSSWR 542
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 117/404 (28%), Positives = 193/404 (47%)
Query: 125 DGCG-GDQQDGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVF-G--SSFQR 180
DG G+ + + G+RLV LL+A A+A +KS + R LV G ++ +R
Sbjct: 87 DGVSFGEPKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMER 146
Query: 181 VASCFVQGLADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFV 240
+A+ F GL+ L L P + D+ + AF L+ + P++ FG+
Sbjct: 147 LAAHFTNGLSKLLERDSVL------CPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLT 200
Query: 241 ANSSILEAFEGESFVHVVDLGMTLGLPRGQQWRRLIESLANR-AGQPPRRLRITAVGLC- 298
A +ILEA + E +H+VD + G+ QW L+++L +R G + LRITA+
Sbjct: 201 ATQAILEAVKYERRIHIVDYDINEGV----QWASLMQALVSRNTGPSAQHLRITALSRAT 256
Query: 299 -----VEKFQSIGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLENEVLVVNSILQL 353
V Q G L +A + G + + + T +K++ E +V+N +L L
Sbjct: 257 NGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINCMLHL 316
Query: 354 HCVVKESRGALNSVLQIIHELSPKVLVLVEQDSSHNG-PFFLGRFMEALHYYSAIFDSLD 412
++ ++ S L L+PK++ LV ++ G FL RFM+ LH +SAIFDSL+
Sbjct: 317 PRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLE 376
Query: 413 AMLPKYDTKRAKIEQFYFAEEIKNIVS--CEGPARVERHERVDQWRRRMSRAGFQAAPMK 470
A L + R +E+ + + N ++ A VE QW + GF+ +
Sbjct: 377 AGLSIANPARGFVERVFIGPWVANWLTRITANDAEVESFASWPQW---LETNGFKPLEVS 433
Query: 471 MINQAQKWLKNNKVCEGYTVVE--EKGCLVLGWKSKPIIATSCW 512
N+ Q L + +G+ V E + G LVLGWKS+ +++ S W
Sbjct: 434 FTNRCQAKLLLSLFNDGFRVEELGQNG-LVLGWKSRRLVSASFW 476
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 358 (131.1 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 107/409 (26%), Positives = 202/409 (49%)
Query: 133 DGTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADR 192
D +A+ +L+ A A + +D + A +L L + +G + Q++AS F+Q L +R
Sbjct: 135 DFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNR 194
Query: 193 L--ASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFE 250
+ + + + + A + +R+ F+ E+ P FGH AN +ILEA +
Sbjct: 195 MTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQ---EVSPWATFGHVAANGAILEAVD 251
Query: 251 GESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKF-------- 302
GE+ +H+VD+ T QW L+E+LA R+ P LR+T V + KF
Sbjct: 252 GEAKIHIVDISSTFCT----QWPTLLEALATRSDDTPH-LRLTTV-VVANKFVNDQTASH 305
Query: 303 ---QSIGDELKDYAKTYGINLEFSVVE--SNLENLQTKDIKVLENEVLVVNSILQLHCVV 357
+ IG+ ++ +A+ G+ +F+++ +L ++ V +EVL +N + +H +
Sbjct: 306 RMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIA 365
Query: 358 KESRGA-LNSVLQIIHELSPKVLVLVEQDSS----HNGPF---FLGRFMEALHYYSAIFD 409
SRG+ ++V+ L P+++ +VE+++ G F FL F E L ++ F+
Sbjct: 366 --SRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFE 423
Query: 410 SLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPM 469
S + P+ +R +E+ I ++V+CE ER E +W RRM +GF A
Sbjct: 424 SWEESFPRTSNERLMLERAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGY 482
Query: 470 --KMINQAQKWLKNNKVCEG-YTVVE--EKGCLVLGWKSKPIIATSCWK 513
++ + + L+ K EG +++V+ + + L W+ +P++ S W+
Sbjct: 483 SDEVADDVRALLRRYK--EGVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 117/403 (29%), Positives = 191/403 (47%)
Query: 134 GTADGMRLVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLADRL 193
G D + QLL+ CA A+ D + +L L A G S QR+ S F++ L R
Sbjct: 20 GCGDANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRA 79
Query: 194 ASVQP-LGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGE 252
S P L + SF P + + E AF ++ P +FG AN++IL A EG
Sbjct: 80 VSKTPTLSSTISFLPQADELHRFSVVELA-AF---VDLTPWHRFGFIAANAAILTAVEGY 135
Query: 253 SFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVE-------KFQSI 305
S VH+VDL +T Q LI+++A+R +PP L++T V ++ +
Sbjct: 136 STVHIVDLSLT----HCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEEL 191
Query: 306 GDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLE------NEVLVVNSILQLHCVVKE 359
G +L ++A T I +EF++V S + + ++ L NE LVVN + L + +E
Sbjct: 192 GSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEE 251
Query: 360 ----SRGALNSV-LQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAM 414
S +L +V L+ + L+P+++ L+E+D + R A +Y+ FD+ D
Sbjct: 252 PLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTF 311
Query: 415 LPKYDTKRAKIEQFYFAE---EIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMK- 470
+ + ++Y AE +I+N+V+ EG RVER E +W RM A F +K
Sbjct: 312 MSEQ-------RRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKE 364
Query: 471 -MINQAQKWLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCW 512
+ + L+ + V G ++ LVL WK ++ + W
Sbjct: 365 DAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 355 (130.0 bits), Expect = 8.4e-32, P = 8.4e-32
Identities = 100/313 (31%), Positives = 167/313 (53%)
Query: 225 RLVYEICPHIQFGHFVANSSILEAFE----GESFVHVVDLGMTLGLPRGQQWRRLIESLA 280
+L+YE+ P + G AN +IL+A + G HV+D +G G Q+ L+ +L+
Sbjct: 334 QLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFD--IG--EGGQYVNLLRTLS 389
Query: 281 NRA-GQPPRR----LRITAV-----GLCV-----EKFQSIGDELKDYAKTYGINLEFSVV 325
R G+ + ++ITAV G V E+ +++GD L GI++ F+VV
Sbjct: 390 TRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFNVV 449
Query: 326 ES-NLENLQTKDIKVLENEVLVVNSILQLHCVVKES---RGALNSVLQIIHELSPKVLVL 381
S L +L + + +E L VN +L+ V ES + +L+ + L P+V+ L
Sbjct: 450 TSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTL 509
Query: 382 VEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCE 441
VEQ+ + N FLGR E+ Y A+ +S+++ +P ++ RAK+E+ ++ N V+CE
Sbjct: 510 VEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEG-IGRKLVNAVACE 568
Query: 442 GPARVERHERVDQWRRRMSRAGFQAAPM-KMINQAQKWLKNNKVCEGYTVVEEKGCLVLG 500
G R+ER E +WR RMS AGF+ P+ + I ++ K + N+V G+TV E+ G + G
Sbjct: 569 GIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMK-SRGNRVHPGFTVKEDNGGVCFG 627
Query: 501 WKSKPIIATSCWK 513
W + + S W+
Sbjct: 628 WMGRALTVASAWR 640
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 200 (75.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 51/180 (28%), Positives = 92/180 (51%)
Query: 342 NEVLVVNSILQLHCVVKESRGALNSVLQIIHELSPKVLVLVEQDSSHNG------PFFLG 395
+E L VN ++ LH + L + L+ + +SP V+ + E+++ G
Sbjct: 263 DETLAVNCVMFLHNLAGHDE--LAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPR 320
Query: 396 RFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQW 455
R A+ +YSA+F++L+A +P +R +EQ EI+ V GP+ +++W
Sbjct: 321 RVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAV---GPSGGRWWRGIERW 377
Query: 456 RRRMSRAGFQAAPMKM--INQAQKWLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
AGF A P+ ++QA+ L+ + EGY V E +G LGW+++P+++ S W+
Sbjct: 378 GGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQ 437
Score = 171 (65.3 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 60/205 (29%), Positives = 96/205 (46%)
Query: 123 AVDGCGGDQQDGTADGMRLVQLLIACAEAVACRDKSHAS-ALLSELRANALVFGSSFQRV 181
AV+G GGDQ+ A LL+ACA+ + D A A L A A G + R+
Sbjct: 33 AVEG-GGDQRAVAAAAPSTRDLLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRL 91
Query: 182 ASCFVQGLADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVY-EICPHIQFGHFV 240
A F + LA R+ + G V ++ +R L + +I P ++F H
Sbjct: 92 AYHFARALALRVDAKAGHGHV--------VVGGGAARPASSGAYLAFNQIAPFLRFAHLT 143
Query: 241 ANSSILEAFEGESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQP--PRRLRITAVGLC 298
AN +ILEA +G VH++DL G+ QW L++++A RA P +R+T G
Sbjct: 144 ANQAILEAVDGARRVHILDLDAVHGV----QWPPLLQAIAERADPALGPPEVRVTGAGAD 199
Query: 299 VEKFQSIGDELKDYAKTYGINLEFS 323
+ G+ L+ +A++ + F+
Sbjct: 200 RDTLLRTGNRLRAFARSIHLPFHFT 224
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 268 (99.4 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 116/421 (27%), Positives = 185/421 (43%)
Query: 128 GGDQQDGTADGMRLVQLLIACAEAVACRDKSH---ASALLSELRANALVFGSS------- 177
G DQ D + + QL A AE ++ A +L+ L N
Sbjct: 231 GEDQNDQDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNNNPKP 290
Query: 178 -FQRVASCFVQGLADRL--ASVQPLGAVGSFAPSMN-IMDIAGSREKEEAFRLVYEICPH 233
F R AS + L L +S+ P S +P N I IA A+R E P
Sbjct: 291 PFHRAASYITEALHSLLQDSSLSP----PSLSPPQNLIFRIA-------AYRAFSETSPF 339
Query: 234 IQFGHFVANSSILEAFEGESFVHVVDLGMTLGLPRGQQWRRLIESLA---NRAGQPPRRL 290
+QF +F AN +ILE+FEG +H+VD +G G QW LI+ LA NR+ P L
Sbjct: 340 LQFVNFTANQTILESFEGFDRIHIVDFD--IGY--GGQWASLIQELAGKRNRSSSAPS-L 394
Query: 291 RITAVG---LCVEKFQS--IGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVL----- 340
+ITA ++F+ + L+ +A G++ E ++ N+E L L
Sbjct: 395 KITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIELL--NMEILLNPTYWPLSLFRS 452
Query: 341 -ENEVLVVNSILQLHCVVKESRGALNSVLQIIHELSPKVLVLVEQ--DSSHNGPFFLGRF 397
E E + VN L + +V G L +L+ + ++SP V+V ++ D +++ PF G
Sbjct: 453 SEKEAIAVN--LPISSMVS---GYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNG-V 506
Query: 398 MEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRR 457
+ AL YY+++ +SLD+ IE+F I+ +++ R ER WR
Sbjct: 507 INALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLT----NRYRWMERSPPWRS 562
Query: 458 RMSRAGFQAAPMKMINQAQ-KWLKNNKVCEGYTVVEEKGC---LVLGWKSKPIIATSCWK 513
+ GF + + Q ++L G+ + + + LVL W+ K ++ S WK
Sbjct: 563 LFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
Query: 514 C 514
C
Sbjct: 623 C 623
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 262 (97.3 bits), Expect = 8.8e-20, P = 8.8e-20
Identities = 97/381 (25%), Positives = 167/381 (43%)
Query: 141 LVQLLIACAEAVACRDKSHASALLSELRAN-ALVFGSSFQRVASCFVQGLADRLASVQPL 199
+ + L+ AE + D A +L+ L + G +R A F + L + L +V
Sbjct: 205 ITEQLVKAAEVIES-DTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQ- 262
Query: 200 GAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVD 259
+ P I IA A++ EI P +QF +F +N ++LE+F G +H++D
Sbjct: 263 ----TLNPYSLIFKIA-------AYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIID 311
Query: 260 LGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGLCVEKFQ-SIG---DELKDYAKT 315
+G G QW L++ L R P L+IT Q +G D LK +A
Sbjct: 312 FD--IGY--GGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASE 367
Query: 316 YGINLEFSVVESNL-ENLQTKDIKVLENEVLVVNSILQLHCVVKESRGALNSVLQIIHEL 374
I+L+ V+ +L ++ + E E + VN + S L VL+ + L
Sbjct: 368 INISLDIQVLSLDLLGSISWPNSS--EKEAVAVN-------ISAASFSHLPLVLRFVKHL 418
Query: 375 SPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEI 434
SP ++V ++ F + +LH ++A+F+SLDA+ D + KIE+F EI
Sbjct: 419 SPTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQ-KIERFLIQPEI 477
Query: 435 KNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKMINQAQ-KWLKNNKVCEGYTVVEE 493
+ +V + +ER W+ + GF ++Q + L G+ V ++
Sbjct: 478 EKLV-LDRSRPIERPMMT--WQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKK 534
Query: 494 KGCLVLGWKSKPIIATSCWKC 514
L+L W+ ++ S W+C
Sbjct: 535 HNSLLLCWQRTELVGVSAWRC 555
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 259 (96.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 109/415 (26%), Positives = 189/415 (45%)
Query: 122 KAVDGCGGDQQDGTADGMRLVQLLIACAEAVACRDKS---HASALLSELRANALVFGSSF 178
KA+ +DG +G +LL CA A+ + S H +LSEL +++ G +
Sbjct: 126 KAIKSSEKSSKDGNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSS---GDAN 182
Query: 179 QRVASCFVQGLADRLASVQPLGAVGSFAPSMNIMDIAGSREK--EEAFRLVYEICPHIQF 236
+R+A+ ++ L L+S SF P + A + K ++ YE+ P
Sbjct: 183 RRLAAFGLRALQHHLSSSS---VSSSFWP---VFTFASAEVKMFQKTLLKFYEVSPWFAL 236
Query: 237 GHFVANSSILEAF----EGESFVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRI 292
+ +ANS+IL+ + + +H++D+G++ G QW L+E+L+ R PP R+RI
Sbjct: 237 PNNMANSAILQILAQDPKDKKDLHIIDIGVS----HGMQWPTLLEALSCRLEGPPPRVRI 292
Query: 293 TAVG-LCVE-KFQ------SIGDELKDYAKTYGINLEFSVVESNLENLQTKDIKVLENEV 344
T + L + F + G +L +A++ INL+ SV L+ LQ D EN
Sbjct: 293 TVISDLTADIPFSVGPPGYNYGSQLLGFARSLKINLQISV----LDKLQLIDTSPHEN-- 346
Query: 345 LVVNSILQLHCVVKESRGALNSVLQIIHELSPKVLVLVEQDS--SHNGPFFLGRFMEALH 402
L+V + +LH + L+ + L PK +VL E + S + F G F + L
Sbjct: 347 LIVCAQFRLHHLKHSINDERGETLKAVRSLRPKGVVLCENNGECSSSADFAAG-FSKKLE 405
Query: 403 YYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRA 462
Y DS + + +++ K+ + E K +++ G + +E ++W RM A
Sbjct: 406 YVWKFLDSTSSGFKEENSEERKLME---GEATKVLMNA-G----DMNEGKEKWYERMREA 457
Query: 463 GF--QAAPMKMINQAQKWLKNNKVCEGYTVVEEKGCLVLG--WKSKPIIATSCWK 513
GF +A ++ A+ L+ K + + E G G WK + + S WK
Sbjct: 458 GFFVEAFEEDAVDGAKSLLR--KYDNNWEIRMEDGDTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 259 (96.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 98/360 (27%), Positives = 169/360 (46%)
Query: 176 SSFQRVASCFVQGLADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQ 235
S FQR AS + L L+ + + P I+ IA A+R E P +Q
Sbjct: 312 SPFQRAASHIAEAL---LSLIHNESSPPLITPENLILRIA-------AYRSFSETSPFLQ 361
Query: 236 FGHFVANSSILEAFEGESF--VHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRIT 293
F +F AN SILE+ F +H++D + G GQ W L++ LA+ G RR R +
Sbjct: 362 FVNFTANQSILESCNESGFDRIHIIDFDVGYG---GQ-WSSLMQELASGVGGR-RRNRAS 416
Query: 294 AVGLCV--EKFQSIGDELK-----DYAKTYG--INLEFSVVESNLENLQTK-----DIKV 339
++ L V ++ DE + + KT+ + + F + ++E L ++
Sbjct: 417 SLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRS 476
Query: 340 LENEVLVVNSILQLHCVVKESRGALNSVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFME 399
E E + VN L ++ V G L +L+ + +LSP ++V ++ N F +
Sbjct: 477 SEKEAIAVN--LPVNSVAS---GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIH 531
Query: 400 ALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERH---ERVDQWR 456
+L Y++++ +SLDA + D+ IE+F+ I+ ++ ++RH ER WR
Sbjct: 532 SLQYHTSLLESLDANQNQDDSS---IERFWVQPSIEKLL-------MKRHRWIERSPPWR 581
Query: 457 RRMSRAGFQAAPMKMINQAQK--WLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWKC 514
++ GF A + + +AQ L+ N V G+ V + + LV+ W+ K ++ S WKC
Sbjct: 582 ILFTQCGFSPASLSQMAEAQAECLLQRNPV-RGFHVEKRQSSLVMCWQRKELVTVSAWKC 640
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 252 (93.8 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 108/405 (26%), Positives = 173/405 (42%)
Query: 126 GCGGDQQDGTADG-MRLVQLLIACAEAVACRDKSHASALLSELRANALV-FGSSFQRVAS 183
G G + D +G ++ LI + V + A +LS L G QR A
Sbjct: 106 GYGFNSLDSVDNGGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAF 165
Query: 184 CFVQGLADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYE---ICPHIQFGHFV 240
F + L L GS + N + ++ E + R + E I P F HF
Sbjct: 166 YFKEALGSFLT--------GS---NRNPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFT 214
Query: 241 ANSSILEAFEGES---FVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGL 297
AN +IL++ +S FVHVVD +G G Q+ L+ + ++ LR+TAV
Sbjct: 215 ANQAILDSLSSQSSSPFVHVVDF--EIGF--GGQYASLMREITEKSVSGGF-LRVTAVVA 269
Query: 298 --CVEKFQSIGDELKDYAKTYGINLEFS-VVESNLENLQTKDIKVLENEVLVVNSILQLH 354
C + + + + L +A I + V+ E L K I+ +E E VV L
Sbjct: 270 EECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVV---LISP 326
Query: 355 CVVKESRGALNSVLQIIHELSPKVLVLVEQDS----SHNGPFFLGRFMEALHYYSAIFDS 410
+ + G + + + +SPKV+V V+ + + +G F F+ AL +Y+ + +S
Sbjct: 327 AIFRRLSG-ITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSF-RREFVSALEFYTMVLES 384
Query: 411 LDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMK 470
LDA P D + +E F +I V A RH WR AG + +
Sbjct: 385 LDAAAPPGDLVKKIVEAFVLRPKISAAVET---AADRRHTGEMTWREAFCAAGMRPIQLS 441
Query: 471 MIN--QAQKWLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
QA+ L+ +V G+ V + +G LVL W + ++ATS W+
Sbjct: 442 QFADFQAECLLEKAQV-RGFHVAKRQGELVLCWHGRALVATSAWR 485
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 238 (88.8 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 105/404 (25%), Positives = 171/404 (42%)
Query: 124 VDGCGGDQQDGTADG-MRLVQLLIACAEAVACRDKSH-ASALLSELRANALVF-GSSFQR 180
+ G G + D +G ++ LI + + D+ H A +LS+L G QR
Sbjct: 81 ITGYGFNSLDSVDNGGFDYIEDLIRVVDCIES-DELHLAHVVLSQLNQRLQTSAGRPLQR 139
Query: 181 VASCFVQGLADRLASVQPLGAVGSFAPSMNIMDIAGSREKEEAFRLVYEICPHIQFGHFV 240
A F + L L + S++ DI +K A + I P F HF
Sbjct: 140 AAFYFKEALGSLLTGTNR-NQLFSWS------DIV---QKIRAIKEFSGISPIPLFSHFT 189
Query: 241 ANSSILEAFEGES---FVHVVDLGMTLGLPRGQQWRRLIESLANRAGQPPRRLRITAVGL 297
AN +IL++ +S FVHVVD +G G Q+ L+ +A ++ LR+TAV
Sbjct: 190 ANQAILDSLSSQSSSPFVHVVDF--EIGF--GGQYASLMREIAEKSANGGF-LRVTAVVA 244
Query: 298 --CVEKFQSIGDELKDYAKTYGINLEFS-VVESNLENLQTKDIKVLENEVLVVNSILQLH 354
C + + + + L +A I + V+ E L K I+ ++ E VV L
Sbjct: 245 EDCAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFEILSFKAIRFVDGERTVV---LISP 301
Query: 355 CVVKESRGALNSVLQIIHELSPKVLVLVEQDS---SHNGPFFLGRFMEALHYYSAIFDSL 411
+ + G V + +SP V+V V+ + + F F+ A +Y+ + +SL
Sbjct: 302 AIFRRVIGIAEFVNNL-GRVSPNVVVFVDSEGCTETAGSGSFRREFVSAFEFYTMVLESL 360
Query: 412 DAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKM 471
DA P D + +E F +I V A R WR + AG + +
Sbjct: 361 DAAAPPGDLVKKIVETFLLRPKISAAVET---AANRRSAGQMTWREMLCAAGMRPVQLSQ 417
Query: 472 IN--QAQKWLKNNKVCEGYTVVEEKGCLVLGWKSKPIIATSCWK 513
QA+ L+ +V G+ V + +G LVL W + ++ATS W+
Sbjct: 418 FADFQAECLLEKAQV-RGFHVAKRQGELVLCWHGRALVATSAWR 460
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 176 (67.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/197 (28%), Positives = 102/197 (51%)
Query: 275 LIESLANRAGQ-PPRRLRITAVGLCVE---------KFQSIGDELKDYAKTYGINLEFSV 324
LI+S+AN+ + PP L++T + E ++ +G +L ++A T + +EF +
Sbjct: 6 LIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRI 65
Query: 325 VESNLENLQTKDIKVLE------NEVLVVNSILQLHCVVKESRGA-LNSV-LQIIHELSP 376
+ S+ + + I+ L NE LVVN + LH + E + L SV L+ + +L+P
Sbjct: 66 ISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNLRSVFLKELRDLNP 125
Query: 377 KVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAE---E 433
++ L+++DS F+ R +Y +D+ + L T+ ++ Q+Y A+ +
Sbjct: 126 TIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFL----TRGSEQRQWYEADISWK 181
Query: 434 IKNIVSCEGPARVERHE 450
I N+V+ EG RVER E
Sbjct: 182 IDNVVAKEGAERVERLE 198
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 138 (53.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 445 RVERHERVDQWRRRMSRAGFQAAPMKM-INQAQKWLKNNKVCEGYTVVEEKGCLVLGWKS 503
RVERHE + +W+ R + AGF P+ +N K L E YT+VE+ G ++LGWK
Sbjct: 3 RVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRC-YSEHYTLVEKDGAMLLGWKK 61
Query: 504 KPIIATSCW 512
+ +I+ S W
Sbjct: 62 RNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 514 470 0.00098 118 3 11 22 0.49 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 617 (66 KB)
Total size of DFA: 288 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.84u 0.11s 39.95t Elapsed: 00:00:02
Total cpu time: 39.85u 0.11s 39.96t Elapsed: 00:00:02
Start: Fri May 10 03:55:13 2013 End: Fri May 10 03:55:15 2013