BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040130
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FE83|SKIP2_ARATH F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1
Length = 527
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/150 (64%), Positives = 118/150 (78%), Gaps = 6/150 (4%)
Query: 1 MGQTPSTAIDPSDR---FNILSPAIVYN-DGVEFSDELDKARDFTGDLPDDCLAYIFQFL 56
MGQ PS+ + + R + SP IV + + + +D RDFTGDLPD+CLA++FQFL
Sbjct: 1 MGQAPSSTAESNGRELDLRLWSPVIVAGGESMAVGNVVD--RDFTGDLPDECLAHVFQFL 58
Query: 57 GSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSI 116
G+GDRKRCSLVCKRWL VDG SR+RLSL+A+ EI S L S+F+RFDSVTKLALRCDRKS+
Sbjct: 59 GAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMFNRFDSVTKLALRCDRKSV 118
Query: 117 SLDDDALVLISLRCQKLTRLKLRGCREITD 146
SL D+AL +IS+RC LTR+KLRGCREITD
Sbjct: 119 SLSDEALAMISVRCLNLTRVKLRGCREITD 148
>sp|Q9SN10|FBL16_ARATH F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2
SV=1
Length = 522
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/149 (60%), Positives = 112/149 (75%), Gaps = 6/149 (4%)
Query: 1 MGQTPSTAIDPSDR---FNILSPAIVYNDGVEFSDELDKARDFTGDLPDDCLAYIFQFLG 57
MGQ PS+ +P+ R + SP + + + F D DFT +LPDDCLA+IFQFL
Sbjct: 1 MGQAPSSPAEPNVRDTSLCLWSPEFLDCESIGFED---GDYDFTANLPDDCLAHIFQFLS 57
Query: 58 SGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSIS 117
+GDRKRCSLV KRWL VDG +R+RLSL+A+SEIL LP +F+RFDSVTKLALRCDR+S S
Sbjct: 58 AGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFDSVTKLALRCDRRSFS 117
Query: 118 LDDDALVLISLRCQKLTRLKLRGCREITD 146
L D+AL ++S+RC L R+KLRGCREITD
Sbjct: 118 LSDEALFIVSIRCSNLIRVKLRGCREITD 146
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 97/108 (89%)
Query: 39 DFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVF 98
D+T LPD+CLA +FQFL SG+RKRC+LVC+RW+ V+G +RYRLSL+A+S++++S+PS+F
Sbjct: 38 DYTSSLPDECLALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLF 97
Query: 99 SRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
SRFDSVTKL+L+CDR+S+S+ D+ALV ISLRC+ L RLKLR CRE+TD
Sbjct: 98 SRFDSVTKLSLKCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTD 145
>sp|Q9S9X4|FBL8_ARATH Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8
PE=4 SV=1
Length = 554
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 102/146 (69%), Gaps = 4/146 (2%)
Query: 1 MGQTPSTAIDPSDRFNILSPAIVYNDGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGD 60
MGQ+ S F SP V + E + D+ D+ +LPD+CL+ IFQ L D
Sbjct: 38 MGQSTSKFRRSKTTFT--SP--VLPNLREQNSGADEPYDYISNLPDECLSLIFQSLTCAD 93
Query: 61 RKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDD 120
KRCSLVC+RWL ++G R+RLSL AQS+++S +PS+F+RFDSVTKL LR DR+S+ + D
Sbjct: 94 LKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLFTRFDSVTKLVLRSDRRSLGICD 153
Query: 121 DALVLISLRCQKLTRLKLRGCREITD 146
+A V+IS+RC+ LTRLKLRGC EI+D
Sbjct: 154 NAFVMISVRCRNLTRLKLRGCPEISD 179
>sp|Q8VYT5|FB254_ARATH F-box protein At5g07670 OS=Arabidopsis thaliana GN=At5g07670 PE=2
SV=1
Length = 476
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 6 STAIDPSDRFNILSPAIVYNDGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCS 65
S+ +D + +F L+P I S DFT LPD L + Q + + RK S
Sbjct: 35 SSPLDLAAKFQSLTPPI--------SKSKTLLPDFTLLLPDLILIRVIQKIPNSQRKNLS 86
Query: 66 LVCKRWLRVDG 76
LVCKRW R+ G
Sbjct: 87 LVCKRWFRLHG 97
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 20/117 (17%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILS----------- 92
LPD + IF FL + RC+ VC+RW + R ++ E ++
Sbjct: 117 LPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINVDRALKVLTRR 176
Query: 93 ---SLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
P+V ++VT R L D L I+ C +L RL++ GC I++
Sbjct: 177 LCQDTPNVCLMLETVTVSGCR------RLTDRGLYTIAQCCPELRRLEVSGCYNISN 227
>sp|Q9SRR1|FBL12_ARATH F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2
SV=1
Length = 395
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 16/104 (15%)
Query: 44 LPDDCLAYIFQFLGS-GDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFD 102
LPDDCL++IFQ L S D L C RWL + SR L +L+ PS S+ +
Sbjct: 18 LPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLN--PSSLSQTN 75
Query: 103 SVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
+ L + R Q L L L GC + D
Sbjct: 76 P-------------DVSSHHLHRLLTRFQWLEHLSLSGCTVLND 106
>sp|Q3EC97|FBL14_ARATH F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2
SV=1
Length = 480
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 43 DLPDDCLAYIFQFLGSGD-RKRCSLVCKRWLRVDGGSRYRLSLNAQSEILS-SLPSVFSR 100
+LPD + I L + D R SL CKR+ +D RY L + S +L S+ R
Sbjct: 16 ELPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLSLCRR 75
Query: 101 FDSVTKLAL----RCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
F +++K+ + + +DD L++++ C LT L L C ITD
Sbjct: 76 FPNLSKVEIIYSGWMSKLGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITD 125
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-NAQSEILSSLPSVFSR 100
LP + L IF FL RC+ + K W L +DG + R+ L N Q+++ + S+
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISK 74
Query: 101 --FDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
+ KL+LR I + D +L + C+ + L L GC +ITD
Sbjct: 75 RCGGFLRKLSLR---GCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITD 119
>sp|Q5NBU5|FBX39_MOUSE F-box only protein 39 OS=Mus musculus GN=Fbxo39 PE=2 SV=2
Length = 443
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV 74
LPD CL +F +LG DR R +LVC++W ++
Sbjct: 19 LPDVCLRRVFWWLGDRDRSRAALVCRKWNQI 49
>sp|Q8N4B4|FBX39_HUMAN F-box only protein 39 OS=Homo sapiens GN=FBXO39 PE=2 SV=1
Length = 442
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW 71
LPD CL +F +LG DR R +LVC++W
Sbjct: 19 LPDLCLCRVFWWLGDRDRSRAALVCRKW 46
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILS----------- 92
LPD + IF FL + RC+ VC+RW + R ++ E ++
Sbjct: 117 LPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETINVDRALKVLTRR 176
Query: 93 ---SLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
P+V ++V R L D L I+ C +L RL++ GC I++
Sbjct: 177 LCQDTPNVCLMLETVIVSGCR------RLTDRGLYTIAQCCPELRRLEVSGCYNISN 227
>sp|Q32LM4|FBX39_BOVIN F-box only protein 39 OS=Bos taurus GN=FBXO39 PE=2 SV=1
Length = 443
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 32 DELDKARDFT--GDLPDDCLAYIFQFLGSGDRKRCSLVCKRW 71
D+L + +D + LPD CL +F +LG DR R +LVC++W
Sbjct: 5 DQLIQPQDQSCWATLPDVCLRRVFWWLGDRDRSRAALVCRKW 46
>sp|Q66H10|FBX39_RAT F-box only protein 39 OS=Rattus norvegicus GN=Fbxo39 PE=2 SV=2
Length = 443
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV 74
LPD CL +F +LG DR R +LVC++W ++
Sbjct: 19 LPDVCLRRVFWWLGDRDRSRAALVCRKWNQI 49
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-NAQSEILSSLPSVFSR 100
LP + L IF FL RC+ + K W L +DG + R+ L N Q+++ + S+
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISK 74
Query: 101 --FDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
+ KL+LR I + D +L + C+ + L L GC +ITD
Sbjct: 75 RCGGFLRKLSLR---GCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITD 119
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-NAQSEILSSLPSVFSR 100
LP + L IF FL RC+ + K W L +DG + R+ L N Q+++ + S+
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISK 74
Query: 101 --FDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
+ KL+LR I + D +L + C+ + L L GC +ITD
Sbjct: 75 RCGGFLRKLSLR---GCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITD 119
>sp|Q2YDQ5|FBXL5_DANRE F-box/LRR-repeat protein 5 OS=Danio rerio GN=fbxl5 PE=2 SV=2
Length = 679
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 18 LSPAIVYNDGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVD-G 76
L A Y+D + DE R LP + L IF+FLG D RC+ VC W +V
Sbjct: 185 LQKAFKYSDHEKTGDERVLERVSVSSLPQELLLRIFRFLGPQDLCRCAQVCSVWTQVTRT 244
Query: 77 GSRYR 81
GS +R
Sbjct: 245 GSLWR 249
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-NAQSEILSSLPSVFSR 100
LP + L IF FL RC+ + K W L +DG + R+ L N Q+++ + S+
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRVDLFNFQTDVEGRVVENISK 74
Query: 101 --FDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
+ KL+LR I + D +L + C+ + L L GC +ITD
Sbjct: 75 RCGGFLRKLSLR---GCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITD 119
>sp|Q16XV7|FBSP1_AEDAE F-box/SPRY domain-containing protein 1 OS=Aedes aegypti GN=Fsn
PE=3 SV=1
Length = 258
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 35 DKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLR 73
D ++ D+PD+ L IF +L D + CSLVCK W R
Sbjct: 3 DDLTEYAPDIPDNVLELIFSYLKLQDLRNCSLVCKSWNR 41
>sp|B0X9V1|FBSP1_CULQU F-box/SPRY domain-containing protein 1 OS=Culex quinquefasciatus
GN=Fsn PE=3 SV=1
Length = 258
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 35 DKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLR 73
D ++ D+PD+ L IF +L D + C+LVCK W R
Sbjct: 3 DDLTEYAPDIPDNVLELIFSYLKLQDLRNCALVCKSWHR 41
>sp|Q7QGL9|FBSP1_ANOGA F-box/SPRY domain-containing protein 1 OS=Anopheles gambiae
GN=Fsn PE=3 SV=3
Length = 258
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 39 DFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLR 73
++ ++PD+ L IF FL D + C+LVCK W R
Sbjct: 7 EYAPNIPDNVLELIFSFLKLQDLRNCTLVCKSWYR 41
>sp|Q9M224|ADLO2_ARATH Protein ARABIDILLO 2 OS=Arabidopsis thaliana GN=At3g60350 PE=2 SV=1
Length = 928
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 9 IDPSDRFNILSPAIVYNDGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVC 68
++ + ++ + SP+ + + ++ + ++T LP D + ++F L DR + C
Sbjct: 9 VEDNGKYKVDSPSYTVIGVEDLAPKVQQYVNWT-SLPYDTVFHLFTRLNYRDRASLASTC 67
Query: 69 KRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFD--SVTKLALRC-DRKSISLD--DDAL 123
+ W SL A S + SSL +FD LA RC D + I D A
Sbjct: 68 RTW----------RSLGASSFLWSSLDLRAHKFDLSMAASLATRCVDLQKIRFRGVDSAD 117
Query: 124 VLISLRCQKLTRLKLRGCREITD 146
+I L+ + L + CR+ITD
Sbjct: 118 AIIHLKARSLLEISGDYCRKITD 140
>sp|Q8BFZ4|FXL21_MOUSE F-box/LRR-repeat protein 21 OS=Mus musculus GN=Fbxl21 PE=1 SV=1
Length = 434
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 42 GDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV----DGGSRYRLSLN--AQSEILSSLP 95
G LP + IFQ+L DR R S VC+RW V D ++ LN A S S+ P
Sbjct: 43 GTLPHHVILQIFQYLPLIDRARASSVCRRWNEVFHIPDLWRKFEFELNQSATSYFKSTHP 102
Query: 96 SVFSRF 101
+ +
Sbjct: 103 DLIQQI 108
>sp|Q3ZBA7|FXL21_BOVIN F-box/LRR-repeat protein 21 OS=Bos taurus GN=FBXL21 PE=2 SV=1
Length = 434
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 42 GDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV----DGGSRYRLSLN 85
G+LP + IFQ+L DR R S VC+RW V D ++ LN
Sbjct: 43 GNLPHHVVLRIFQYLPLIDRARASSVCRRWNEVFHIPDLWRKFEFELN 90
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-NAQSEILSSLPSVFSR 100
LP + L +F FL + R + VC+ W L +DG + R+ L Q ++ +++
Sbjct: 60 LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAV------ 113
Query: 101 FDSVTKLALRCDR--KSISL------DDDALVLISLRCQKLTRLKLRGCREITD 146
V LA RC K +SL D AL + RC L L L C+ +TD
Sbjct: 114 ---VENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTD 164
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 24/131 (18%)
Query: 34 LDKARDFTGD----LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSE 89
L + RD G LPD IF L + RC+ VC+RW + R ++ +
Sbjct: 101 LRQPRDQQGAPVDILPDHAFLQIFTHLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGD 160
Query: 90 IL--------------SSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTR 135
+L P+V ++V R L D L ++ C +L R
Sbjct: 161 VLHVDRALRVLTRRLCQDTPNVCLTVETVMVSGCR------RLTDRGLYTVAQSCPELRR 214
Query: 136 LKLRGCREITD 146
L++ GC +++
Sbjct: 215 LEVAGCYNVSN 225
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-----NAQSEILSSLPS 96
LP + L IF FL RC+ V + W L +DG + R+ L + + ++ ++
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 97 VFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
F + KL+LR + + D+AL + C+ + L L GC + TD
Sbjct: 88 RCGGF--LRKLSLR---GCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTD 132
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-----NAQSEILSSLPS 96
LP + L IF FL RC+ V + W L +DG + R+ L + + ++ ++
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 97 VFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
F + KL+LR + + D+AL + C+ + L L GC + TD
Sbjct: 88 RCGGF--LRKLSLR---GCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTD 132
>sp|Q9LW29|AFB2_ARATH Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2
PE=1 SV=1
Length = 575
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 LPDDCLAYIFQFLGSG-DRKRCSLVCKRWLRVDGGSRYRL 82
PD+ + ++F F+ S DR SLVCK W +++ SR ++
Sbjct: 4 FPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKV 43
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 44 LPDDCLAYIFQFLGSG-DRKRCSLVCKRWLRVDGGSRYRLSLNA 86
LP++ + IF+ L S +R CSLVCKRWL ++ SR L + A
Sbjct: 11 LPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGA 54
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-----NAQSEILSSLPS 96
LP + L IF FL RC+ V + W L +DG + R+ L + + ++ ++
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 97 VFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
F + KL+LR + + D+AL + C+ + L L GC + TD
Sbjct: 88 RCGGF--LRKLSLR---GCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTD 132
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRW--LRVDGGSRYRLSL-----NAQSEILSSLPS 96
LP + L IF FL RC+ V + W L +DG + R+ L + + ++ ++
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 97 VFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITD 146
F + KL+LR + + D+AL + C+ + L L GC + TD
Sbjct: 88 RCGGF--LRKLSLR---GCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTD 132
>sp|Q9LPW7|AFB3_ARATH Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3
PE=1 SV=1
Length = 577
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 44 LPDDCLAYIFQFLGSG-DRKRCSLVCKRWLRVDGGSR 79
PD+ + ++F F+ S DR SLVCK W +++ SR
Sbjct: 4 FPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSR 40
>sp|B3FL73|FXL21_SHEEP F-box/LRR-repeat protein 21 OS=Ovis aries GN=Fbxl21 PE=1 SV=1
Length = 434
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 33 ELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV----DGGSRYRLSLN 85
+ AR G LP + +FQ+L DR R S VC+RW V D ++ LN
Sbjct: 34 HMRAARLDWGSLPHRVVLCVFQYLPLIDRARASSVCRRWNEVFHIPDLWRKFEFELN 90
>sp|Q9UKT6|FXL21_HUMAN F-box/LRR-repeat protein 21 OS=Homo sapiens GN=FBXL21 PE=1 SV=1
Length = 434
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 28 VEFSDELDKARDFT-----GDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV----DGGS 78
V F L++ T G LP + IFQ+L DR S VC+RW V D
Sbjct: 24 VGFYSSLNQTHTHTVLLDWGSLPHHVVLQIFQYLPLLDRACASSVCRRWNEVFHISDLWR 83
Query: 79 RYRLSLN--AQSEILSSLPSVFSRF 101
++ LN A S S+ P + +
Sbjct: 84 KFEFELNQSATSSFKSTHPDLIQQI 108
>sp|Q8RWQ8|FBX14_ARATH F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=2 SV=1
Length = 623
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 35 DKARDFTGDLP-------DDCLAYIFQFLGSG-DRKRCSLVCKRWLRVDGGSRYRLSLNA 86
+K+R+F P ++ L + QFL S DR SLVC+ W RV+ +R + +
Sbjct: 38 NKSRNFKSSPPPCPDHVLENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGN 97
Query: 87 QSEILSSLPSVFSRFDSVTKLALR 110
+ S + RF V L L+
Sbjct: 98 CYSL--SPARLIHRFKRVRSLVLK 119
>sp|O49286|SKP2B_ARATH F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1
Length = 360
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 43 DLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLP-SVFSRF 101
D+P + L I + S +C W RLSL+ + ++SL S+ +F
Sbjct: 30 DIPVELLMKILNLVDDRTVIIASCICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKF 89
Query: 102 DSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDH 147
+ L LR D+ L+D+A+ I+ C +L L L +ITDH
Sbjct: 90 VKLQTLVLRQDKPQ--LEDNAVEAIANHCHELQDLDLSKSSKITDH 133
>sp|Q9NXK8|FXL12_HUMAN F-box/LRR-repeat protein 12 OS=Homo sapiens GN=FBXL12 PE=1 SV=1
Length = 326
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 43 DLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV 74
+LPD L IF +L DR R S VC RW R+
Sbjct: 6 ELPDSVLLEIFSYLPVRDRIRISRVCHRWKRL 37
>sp|Q13309|SKP2_HUMAN S-phase kinase-associated protein 2 OS=Homo sapiens GN=SKP2 PE=1
SV=2
Length = 424
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDS 103
LPD+ L IF L + + S VCKRW R+ +L+ + L P V R S
Sbjct: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLH--PDVTGRLLS 157
Query: 104 VTKLALRCDR----------------KSISLDDDALVLISL-----RCQKLTRLKLRGCR 142
+A RC R + + L + + + +L +C KL L L G R
Sbjct: 158 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLR 217
>sp|Q9EPX5|FXL12_MOUSE F-box/LRR-repeat protein 12 OS=Mus musculus GN=Fbxl12 PE=2 SV=1
Length = 326
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 43 DLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRV 74
DLPD L IF +L DR R S VC RW R+
Sbjct: 6 DLPDLVLLEIFSYLPVRDRIRISRVCHRWKRL 37
>sp|Q9M310|FBK77_ARATH F-box/kelch-repeat protein At3g61590 OS=Arabidopsis thaliana
GN=At3g61590 PE=1 SV=1
Length = 411
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 29 EFSDELDKARDFTGD--LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNA 86
E SD+ K F+ D LPDD L I FL R VCKRW + R+ + +
Sbjct: 26 EQSDDEAKVETFSMDSLLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSN 85
Query: 87 QSEILSSLPSVF 98
S +S P F
Sbjct: 86 NS--VSQRPWYF 95
>sp|Q5RDA9|FBX42_PONAB F-box only protein 42 OS=Pongo abelii GN=FBXO42 PE=2 SV=1
Length = 717
Score = 33.5 bits (75), Expect = 0.49, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 43 DLPDDCLAYIFQFLGS-GDRKRCSLVCKRWLRVDGG 77
+LP++ L YI FL + K +LVCK+W R+ G
Sbjct: 49 ELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKG 84
>sp|Q6PDJ6|FBX42_MOUSE F-box only protein 42 OS=Mus musculus GN=Fbxo42 PE=1 SV=1
Length = 717
Score = 33.5 bits (75), Expect = 0.49, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 43 DLPDDCLAYIFQFLGS-GDRKRCSLVCKRWLRVDGG 77
+LP++ L YI FL + K +LVCK+W R+ G
Sbjct: 49 ELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKG 84
>sp|Q6P3S6|FBX42_HUMAN F-box only protein 42 OS=Homo sapiens GN=FBXO42 PE=1 SV=1
Length = 717
Score = 33.5 bits (75), Expect = 0.49, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 43 DLPDDCLAYIFQFLGS-GDRKRCSLVCKRWLRVDGG 77
+LP++ L YI FL + K +LVCK+W R+ G
Sbjct: 49 ELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKG 84
>sp|Q9Z0Z3|SKP2_MOUSE S-phase kinase-associated protein 2 OS=Mus musculus GN=Skp2 PE=1
SV=1
Length = 424
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 44 LPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDS 103
LPD+ L IF L + R S VCKRW R+ SL+ + L P V R S
Sbjct: 100 LPDELLLGIFSCLCLPELLRVSGVCKRWYRLSLDESLWQSLDLAGKNLH--PDVTVRLLS 157
Query: 104 VTKLALRCDR 113
+A RC R
Sbjct: 158 RGVVAFRCPR 167
>sp|B4F739|FBSP1_XENTR F-box/SPRY domain-containing protein 1 OS=Xenopus tropicalis
GN=fbxo45 PE=2 SV=2
Length = 282
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 41 TGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLR 73
+G LP L +F +L D + C LVCK W R
Sbjct: 32 SGRLPSRVLELVFSYLDLPDLRSCGLVCKHWYR 64
>sp|C0HAC0|FBXL5_SALSA F-box/LRR-repeat protein 5 OS=Salmo salar GN=fbxl5 PE=2 SV=1
Length = 696
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 18 LSPAIVYNDGVEFSDELDKA--RDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRW 71
L A Y D + DEL+K LP + L +F++LG D C VC W
Sbjct: 183 LHKAFKYADHEKTDDELEKELCSTHISQLPTEILLCLFRYLGPEDLCHCGQVCSAW 238
>sp|Q32PG9|FXL12_BOVIN F-box/LRR-repeat protein 12 OS=Bos taurus GN=FBXL12 PE=2 SV=1
Length = 326
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 42 GDLPDDCLAYIFQFLGSGDRKRCSLVCKRW 71
DLPD L IF +L DR R S VC W
Sbjct: 5 ADLPDSVLLEIFSYLPVRDRIRISRVCHHW 34
>sp|Q9LTX2|TIR1L_ARATH Transport inhibitor response 1-like protein OS=Arabidopsis
thaliana GN=At5g49980 PE=1 SV=1
Length = 619
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 34 LDKARDFTGDLPDDCLAYIFQFLGS-GDRKRCSLVCKRWLRVDGGSR 79
+ ++ F + ++ L + QFL S DR SLVCK W RV+ +R
Sbjct: 44 ISNSQTFPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTR 90
>sp|Q8N531|FBXL6_HUMAN F-box/LRR-repeat protein 6 OS=Homo sapiens GN=FBXL6 PE=2 SV=1
Length = 539
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 24/123 (19%)
Query: 44 LPDDCLAYIFQFLGSGDRK-----RCSLVCKRWLRVDG---------------GSRYRLS 83
+P + L IF L + D R + VC+RW G +
Sbjct: 115 IPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTLSSPLVGRPAKGG 174
Query: 84 LNAQSEILSSLPSVF-SRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCR 142
+ A+ ++L+SL + +RF + +L L + + L L+ C +LT LKL GC
Sbjct: 175 VKAEKKLLASLEWLMPNRFSQLQRLTLIHWKSQV---HPVLKLVGECCPRLTFLKLSGCH 231
Query: 143 EIT 145
+T
Sbjct: 232 GVT 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,960,043
Number of Sequences: 539616
Number of extensions: 2118445
Number of successful extensions: 4316
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 4147
Number of HSP's gapped (non-prelim): 194
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)