Query 040133
Match_columns 1013
No_of_seqs 541 out of 2968
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 08:16:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040133.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040133hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3afg_A Subtilisin-like serine 100.0 6.8E-55 2.3E-59 517.7 29.7 350 50-465 36-419 (539)
2 2z2z_A TK-subtilisin precursor 100.0 6.9E-55 2.4E-59 499.6 24.9 354 49-466 2-394 (395)
3 1r6v_A Subtilisin-like serine 100.0 5.6E-52 1.9E-56 500.6 43.9 373 42-463 24-438 (671)
4 3t41_A Epidermin leader peptid 100.0 6.5E-53 2.2E-57 492.9 27.6 355 48-467 43-468 (471)
5 1r0r_E Subtilisin carlsberg; h 100.0 3.9E-52 1.3E-56 454.8 24.5 267 165-463 3-274 (274)
6 1dbi_A AK.1 serine protease; h 100.0 1.1E-51 3.9E-56 452.6 27.3 271 159-463 3-279 (280)
7 1gci_A Subtilisin; hydrolase, 100.0 1.1E-51 3.9E-56 450.2 25.9 264 165-463 3-269 (269)
8 1to2_E Subtilisin BPN'; serine 100.0 9.8E-52 3.4E-56 453.3 23.9 266 166-463 4-275 (281)
9 3i6s_A Subtilisin-like proteas 100.0 3.3E-51 1.1E-55 494.6 29.3 266 185-463 13-495 (649)
10 1thm_A Thermitase; hydrolase(s 100.0 5.7E-51 2E-55 446.7 27.6 269 160-463 4-278 (279)
11 2x8j_A Intracellular subtilisi 100.0 1.3E-51 4.3E-56 461.7 21.6 279 163-471 18-318 (327)
12 2id4_A Kexin; KEX2, kexin, fur 100.0 3.9E-50 1.3E-54 473.7 32.3 390 159-582 20-462 (503)
13 3lpc_A APRB2; protease, subtil 100.0 7.6E-51 2.6E-55 456.3 25.0 280 159-466 2-339 (340)
14 1xf1_A C5A peptidase, SCP; hyd 100.0 3.8E-50 1.3E-54 503.4 32.0 360 181-558 2-588 (926)
15 2iy9_A SUBA; toxin, shiga, pla 100.0 5.7E-51 2E-55 459.0 22.1 278 159-469 16-334 (347)
16 2z30_A TK-subtilisin; thermoco 100.0 1E-50 3.4E-55 452.8 23.8 272 161-466 3-319 (320)
17 2ixt_A 36KDA protease; serine 100.0 5.9E-50 2E-54 443.9 25.7 278 164-458 4-309 (310)
18 2p4e_P Proprotein convertase s 100.0 2.1E-52 7.1E-57 502.4 5.3 328 45-443 71-422 (692)
19 1p8j_A Furin precursor; prohor 100.0 7.5E-49 2.6E-53 459.3 34.8 390 159-582 6-447 (471)
20 3vta_A Cucumisin; subtilisin-l 100.0 4.8E-49 1.7E-53 475.0 32.2 264 187-463 13-475 (621)
21 2oxa_A Extracellular serine pr 100.0 1.7E-48 5.8E-53 468.9 36.7 393 158-582 26-554 (600)
22 4h6w_A N-terminal cyanobactin 100.0 3.2E-49 1.1E-53 436.7 22.6 276 181-469 6-293 (306)
23 4h6x_A Thiazoline oxidase/subt 100.0 9.2E-49 3.1E-53 443.4 22.5 274 183-469 18-343 (357)
24 1y9z_A Alkaline serine proteas 100.0 1.6E-48 5.4E-53 453.0 25.0 270 165-467 3-430 (441)
25 3zxy_A Subtilisin-like protein 100.0 1.5E-48 5.1E-53 427.4 23.2 264 193-469 4-280 (282)
26 3hjr_A Extracellular serine pr 100.0 3.6E-47 1.2E-51 457.0 36.6 396 160-582 28-554 (600)
27 1wmd_A Protease; alpha-beta hy 100.0 1.6E-48 5.4E-53 451.9 23.8 278 180-464 5-318 (434)
28 1sh7_A Extracellular subtilisi 100.0 1.1E-47 3.6E-52 422.1 26.0 254 164-446 2-259 (284)
29 2b6n_A Proteinase K; S binding 100.0 3.7E-47 1.3E-51 416.2 22.9 253 163-444 3-261 (278)
30 4dzt_A Aqualysin-1, aqualysin- 100.0 4.2E-47 1.4E-51 414.9 23.3 254 163-446 3-261 (276)
31 2pwa_A Proteinase K; structure 100.0 8.9E-47 3E-51 413.8 20.6 261 163-458 3-271 (279)
32 3lxu_X Tripeptidyl-peptidase 2 100.0 6E-45 2E-49 457.2 33.2 441 197-671 214-744 (1354)
33 3f7m_A Alkaline serine proteas 100.0 2.7E-45 9.3E-50 401.2 18.8 249 164-444 5-261 (279)
34 2qtw_B Proprotein convertase s 100.0 1.4E-44 4.8E-49 424.8 19.6 248 166-443 2-270 (546)
35 1t1e_A Kumamolisin; proenzyme, 99.9 4.5E-26 1.5E-30 271.0 11.7 266 192-467 208-545 (552)
36 1ga6_A Serine-carboxyl protein 99.8 4.7E-21 1.6E-25 217.9 15.3 213 252-468 91-368 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.1 9.1E-11 3.1E-15 139.2 10.4 144 275-418 284-473 (544)
38 3cnq_P Subtilisin BPN'; unclea 97.8 3.8E-05 1.3E-09 68.0 6.8 73 46-130 5-77 (80)
39 2qtw_A Proprotein convertase s 97.7 1.7E-05 5.9E-10 76.7 3.6 80 44-128 42-123 (124)
40 2w2n_P Proprotein convertase s 97.3 0.0001 3.5E-09 70.1 3.8 80 43-128 31-113 (114)
41 1v5i_B POIA1, IA-1=serine prot 97.1 0.00088 3E-08 59.0 7.0 67 50-128 3-75 (76)
42 2z30_B TK-subtilisin; thermoco 92.5 0.041 1.4E-06 46.9 1.6 63 50-128 2-64 (65)
43 3lxu_X Tripeptidyl-peptidase 2 77.8 0.98 3.4E-05 58.5 3.0 24 192-215 32-55 (1354)
44 3rht_A (gatase1)-like protein; 76.6 3.5 0.00012 44.4 6.5 70 627-697 15-88 (259)
45 2gk3_A Putative cytoplasmic pr 61.2 2.9 9.8E-05 44.6 1.7 68 628-696 39-126 (256)
46 1t0b_A THUA-like protein; treh 53.7 20 0.00068 38.2 6.7 61 633-694 36-103 (252)
47 4e5v_A Putative THUA-like prot 50.3 36 0.0012 36.8 8.2 63 632-695 23-93 (281)
48 2e6j_A Hydin protein; PAPD, st 49.3 24 0.00081 32.0 5.7 102 470-585 8-111 (112)
49 2l2t_A Receptor tyrosine-prote 46.8 9.3 0.00032 30.2 2.0 9 987-995 29-37 (44)
50 3soz_A ORF 245 protein, cytopl 44.8 9.9 0.00034 40.6 2.6 65 632-697 36-120 (248)
51 2ks1_B Epidermal growth factor 39.8 15 0.0005 29.1 2.1 9 986-994 29-37 (44)
52 3l42_A Peregrin; transcription 38.0 19 0.00065 34.8 3.1 43 664-717 25-80 (130)
53 3tty_A Beta-GAL, beta-galactos 32.8 50 0.0017 40.1 6.4 72 630-715 426-497 (675)
54 3qbt_B Inositol polyphosphate 31.7 1.8E+02 0.0061 27.9 9.0 106 468-585 23-139 (140)
55 3bdk_A D-mannonate dehydratase 25.4 69 0.0024 36.2 5.5 75 601-695 8-84 (386)
56 2rdd_B UPF0092 membrane protei 24.4 52 0.0018 24.7 2.9 18 986-1003 15-32 (37)
57 3lmz_A Putative sugar isomeras 24.3 1.6E+02 0.0055 30.2 7.8 54 630-699 31-85 (257)
No 1
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=6.8e-55 Score=517.68 Aligned_cols=350 Identities=29% Similarity=0.406 Sum_probs=282.2
Q ss_pred CcEEEEeCCCCChHHHHHHHHhhcCCCCCchhhccCCCccccceeeeEEecccccHHHHHHH-----------HcCCCce
Q 040133 50 NNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEI-----------ERLNLVK 118 (1013)
Q Consensus 50 ~~yIV~fk~~~~~~~~~~~l~~~~~~~~~~~v~r~~~~~~~~~~f~v~~v~~~~~~~~i~~L-----------~~~P~V~ 118 (1013)
-+|||+||++.+.++..+.++.. +.++..+ |. .+..+ ....+++.+++| +++|+|+
T Consensus 36 ~~~iV~~~~~~~~~~~~~~~~~~----g~~v~~~------~~-~~~g~--~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~ 102 (539)
T 3afg_A 36 VSTIIMFDNQADKEKAVEILDFL----GAKIKYN------YH-IIPAL--AVKIKVKDLLIIAGLMDTGYFGNAQLSGVQ 102 (539)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHH----TCEEEEE------CS-SSSEE--EEEEEHHHHHHHTTCSCCC---CCCCTTEE
T ss_pred eEEEEEECCCCCHHHHHHHHHhc----CCeEEEE------ee-eeeEE--EEEeCHHHHHHHHhhccccccccccCCCee
Confidence 45999999976555555555443 2232222 21 13333 334566778889 8899999
Q ss_pred EEEeCceeeecccCCcccCCCCCCCccccccccccCcccccccccCCccccccccccccccccccCchhhhhCCCCCCCc
Q 040133 119 DVSVDSSYKRGLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKV 198 (1013)
Q Consensus 119 ~Vepd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV 198 (1013)
+||+++.++.... .+++.. ....++++.+|+.+++|+||
T Consensus 103 ~v~~d~~~~~~~~-----------------------------------~~~~~~------~~~~~~~~~~~~~g~~G~gv 141 (539)
T 3afg_A 103 FIQEDYVVKVAVE-----------------------------------TEGLDE------SAAQVMATNMWNLGYDGSGI 141 (539)
T ss_dssp EEEECCEEECC----------------------------------------------------CCBCSCCBCCSCCCTTC
T ss_pred EEEecccccccCc-----------------------------------cccCCc------cccccCcHhHHhcCCCCCCc
Confidence 9999998865211 001100 11235778899999999999
Q ss_pred EEEEEcCCCCCCCCCccc-ccccccCCCC-CCCCCCCCCcchhhhhhhccCCC----cccccCCCeEEEEEEecCCCCCc
Q 040133 199 KMAIFDTGIRENHPHFRN-IKERTNWTNE-DTLNDNLGHGTFVAGVVAGQDAE----CLGFAPDTEIYAFRVFTDAQVSY 272 (1013)
Q Consensus 199 ~VaVIDTGId~~Hpdl~~-i~~~~~~~~~-~~~~D~~gHGThVAGIIAg~~~~----~~GVAP~A~I~~vrV~~~~g~~~ 272 (1013)
+|||||||||.+||+|.+ +....+|.+. ..+.|++||||||||||||.+++ +.||||+|+|+++|+++..+.+.
T Consensus 142 ~VaViDtGid~~Hpdl~~~i~~~~d~~~~~~~~~D~~gHGThVAgiiag~~~~~~g~~~GvAp~A~l~~~kv~~~~g~~~ 221 (539)
T 3afg_A 142 TIGIIDTGIDASHPDLQGKVIGWVDFVNGKTTPYDDNGHGTHVASIAAGTGAASNGKYKGMAPGAKLVGIKVLNGQGSGS 221 (539)
T ss_dssp EEEEEESBCCTTSGGGTTTEEEEEETTTCCSSCCBSSSHHHHHHHHHHCCCGGGTTTTCCSCTTCEEEEEECSCTTSEEE
T ss_pred EEEEEecCCCCCChHHhCCEeeeEECCCCCCCCCCCCCCHHHHHHHHhCcCccCCCCEEEECCCCEEEEEEeecCCCCcC
Confidence 999999999999999985 3445566544 34678899999999999987532 67999999999999998877778
Q ss_pred hHHHHHHHHHHHhC----CCeEEEecCCCCCC--CChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEe
Q 040133 273 TSWFLDAFNYAIAT----NIDVLNLSIGGPDY--LDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVG 346 (1013)
Q Consensus 273 ~s~il~Ai~~Ai~~----gadVINlS~G~~~~--~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVG 346 (1013)
.+++++||+||+++ |++|||||||+... ....+.+++.++.++|+++|+||||+|....++.+|+..+++|+||
T Consensus 222 ~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVg 301 (539)
T 3afg_A 222 ISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVG 301 (539)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEE
T ss_pred HHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEe
Confidence 89999999999976 89999999998643 3456788899999999999999999998767788999999999999
Q ss_pred eeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCC-----C----CeeeeCCchhHHHHHHHHHHHHHHh
Q 040133 347 GIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIS-----T----GCKSLSGTSVASPVVAGVVCLLVSV 417 (1013)
Q Consensus 347 Avd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~-----~----~y~~~sGTSmAAP~VAGvaALLls~ 417 (1013)
|++..+.+++|||+| |..++++||||+|||.+|+++... + .|..++|||||||||||++|||+++
T Consensus 302 A~~~~~~~a~fSs~G------p~~~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~ 375 (539)
T 3afg_A 302 AVDKYDVITDFSSRG------PTADNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQA 375 (539)
T ss_dssp EECTTSCBCSSSCCC------CCTTCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred eecCCcccccccCCC------CCCCCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999 556889999999999999998742 2 4899999999999999999999999
Q ss_pred CCCCCcCCCCCHHHHHHHHHhccccCCC--CCCCCccccccCHHHHHHHH
Q 040133 418 IPENNRKNILNPASMKQALVEGAAKLSG--PNMYEQGAGRVDLLESYEIL 465 (1013)
Q Consensus 418 ~P~~~~~~~ltp~~VK~~L~~TA~~~~~--~~~~~~G~G~lna~~Av~~l 465 (1013)
+|+ |++++||++|++||+++.. .....+|+|+||+.+|++..
T Consensus 376 ~p~------~s~~~vk~~L~~tA~~~~~~~~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 376 HPS------WTPDKVKTALIETADIVKPDEIADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp CTT------CCHHHHHHHHHHHSBCSSGGGCSBTTTBTCBCCHHHHHTGG
T ss_pred CCC------CCHHHHHHHHHhhCccCCCCCCCccCccCCccCHHHHhhhc
Confidence 999 9999999999999998763 23457899999999999865
No 2
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=6.9e-55 Score=499.64 Aligned_cols=354 Identities=25% Similarity=0.337 Sum_probs=278.3
Q ss_pred CCcEEEEeCCCCChHHHHHHHHhhcCCCCCchhhccCCCccccceeeeEEecccccHHHHHHHHcCCCceEEEeCceeee
Q 040133 49 RNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVSVDSSYKR 128 (1013)
Q Consensus 49 ~~~yIV~fk~~~~~~~~~~~l~~~~~~~~~~~v~r~~~~~~~~~~f~v~~v~~~~~~~~i~~L~~~P~V~~Vepd~~~~~ 128 (1013)
+.+|||+||++... ++.+++. +.+++.+ |. .+.++.+ ..+++.+++|+++|+|++|||++.++.
T Consensus 2 ~~~~iV~~~~~~~~---~~~~~~~----g~~v~~~------~~-~~~~~~~--~~~~~~~~~L~~~p~V~~v~~~~~~~~ 65 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN---PHEVLGI----GGHIVYQ------FK-LIPAVVV--DVPANAVGKLKKMPGVEKVEFDHQAVL 65 (395)
T ss_dssp EEEEEEEECTTTCC---HHHHHHT----TCEEEEE------CS-SSSEEEE--EEEGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred cEEEEEEECCCccH---HHHHHHc----CCEEEEE------ec-cCCEEEE--EECHHHHHHHHcCCCceEEEEeeeecc
Confidence 36899999997543 2334332 3333332 21 1333333 234467899999999999999999876
Q ss_pred cccCCcccCCCCCCCccccccccccCcccccccccCCccccccccccccccccccCchhhhhCCCCCCC--cEEEEEcCC
Q 040133 129 GLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAK--VKMAIFDTG 206 (1013)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~G--V~VaVIDTG 206 (1013)
.... ..+. .. ........+|+++. ++++.+|+.+ +|+| |+|||||||
T Consensus 66 ~~~~---~~~~---------------~~--~~~~~~~~~w~~~~----------i~~~~~w~~~-~G~g~~v~VaViDtG 114 (395)
T 2z2z_A 66 LGKP---SWLG---------------GG--STQPAQTIPWGIER----------VKAPSVWSIT-DGSVSVIQVAVLDTG 114 (395)
T ss_dssp CCEE---CC-----------------------CCSCCCCHHHHH----------TTCGGGGGTC-SSCCTTCEEEEEESC
T ss_pred cCCC---Cccc---------------cc--ccCccccCCcchhh----------cCHHHHHhhc-CCCCCcEEEEEEcCC
Confidence 4320 0000 00 00112335787654 5788999998 9999 999999999
Q ss_pred CCCCCCCccc-ccccccCCCCC------CCCCCCCCcchhhhhhhccCCC--cccccCCCeEEEEEEecCCCCCchHHHH
Q 040133 207 IRENHPHFRN-IKERTNWTNED------TLNDNLGHGTFVAGVVAGQDAE--CLGFAPDTEIYAFRVFTDAQVSYTSWFL 277 (1013)
Q Consensus 207 Id~~Hpdl~~-i~~~~~~~~~~------~~~D~~gHGThVAGIIAg~~~~--~~GVAP~A~I~~vrV~~~~g~~~~s~il 277 (1013)
||.+||+|.+ +..+.++.... +..|..||||||||||+|..++ +.||||+|+|+++|+++..+.+..++++
T Consensus 115 id~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~n~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~ 194 (395)
T 2z2z_A 115 VDYDHPDLAANIAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALNNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIA 194 (395)
T ss_dssp BCTTCTTTGGGEEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCCSSSSCCCSSTTCEEEEEECSCTTSEEEHHHHH
T ss_pred CCCCChhHhhccccCccccCCcccCCCCCCCCCCCCHHHHHHHHHeecCCCceEEECCCCEEEEEEEecCCCCccHHHHH
Confidence 9999999985 33444443322 2467899999999999997543 6899999999999999887777889999
Q ss_pred HHHHHHHhC--------------------CCeEEEecCCCCCCCChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCC
Q 040133 278 DAFNYAIAT--------------------NIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPA 337 (1013)
Q Consensus 278 ~Ai~~Ai~~--------------------gadVINlS~G~~~~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA 337 (1013)
+||+||+++ +++|||||||+... ...+.+++.++.++|+++|+||||+|.. ...+|+
T Consensus 195 ~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gv~vV~AAGN~g~~--~~~~Pa 271 (395)
T 2z2z_A 195 IGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD-DSYLYDMIIQAYNAGIVIVAASGNEGAP--SPSYPA 271 (395)
T ss_dssp HHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC-CHHHHHHHHHHHHTTCEEEEECCSSCCS--SCCBTT
T ss_pred HHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC-CHHHHHHHHHHHHCCCEEEEECCCCCCC--CCCCcc
Confidence 999999988 99999999998754 4567888999999999999999999974 347899
Q ss_pred CCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCCchhHHHHHHHHHHHHHHh
Q 040133 338 DQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSV 417 (1013)
Q Consensus 338 ~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~ 417 (1013)
.++++|+|||++.++.++.|||+| |+|+|||.+|+++.++++|..++|||||||||||++|||+++
T Consensus 272 ~~~~vi~Vga~~~~~~~a~fS~~G--------------~~v~APG~~i~s~~~~~~y~~~sGTS~AaP~VaG~aAll~~~ 337 (395)
T 2z2z_A 272 AYPEVIAVGAIDSNDNIASFSNRQ--------------PEVSAPGVDILSTYPDDSYETLMGTAMATPHVSGVVALIQAA 337 (395)
T ss_dssp TSTTEEEEEEECTTSCBCTTSCSS--------------CSEEEECSSEEEEETTTEEEEEESHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEecCCCCCCcccCCC--------------CCEEeCCCCeeeecCCCceEecCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999 568999999999999999999999999999999999999999
Q ss_pred CCCCC-------cCCCCCHHHHHHHHHhccccCCCCC-CCCccccccCHHHHHHHHH
Q 040133 418 IPENN-------RKNILNPASMKQALVEGAAKLSGPN-MYEQGAGRVDLLESYEILK 466 (1013)
Q Consensus 418 ~P~~~-------~~~~ltp~~VK~~L~~TA~~~~~~~-~~~~G~G~lna~~Av~~l~ 466 (1013)
+|+.. ....|++.+||++|++||+++.... ...+|||+||+.+|++.++
T Consensus 338 ~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g~~~~~G~G~vd~~~A~~~a~ 394 (395)
T 2z2z_A 338 YYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTGWDADYGYGVVRAALAVQAAL 394 (395)
T ss_dssp HHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSSSBTTTBTCBCCHHHHHHHHH
T ss_pred CccccccccccccccCCCHHHHHHHHHhhccccCCCCCCCCccCceeCHHHHHHHHh
Confidence 98100 0013999999999999999886432 3568999999999999765
No 3
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=5.6e-52 Score=500.56 Aligned_cols=373 Identities=21% Similarity=0.288 Sum_probs=276.2
Q ss_pred CCcCcccCCcEEEEeCCCCChHHHHHHHHhhcCCCCCchhhccCCCccccceeee--EEecccccHHHHHHHHc--CCCc
Q 040133 42 QNQTRISRNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGL--ISVEESAKQGLIEEIER--LNLV 117 (1013)
Q Consensus 42 ~~~~~~v~~~yIV~fk~~~~~~~~~~~l~~~~~~~~~~~v~r~~~~~~~~~~f~v--~~v~~~~~~~~i~~L~~--~P~V 117 (1013)
......++++|||+||+.. ..+++++.. +.+++.+ ++ .+.+ +.++....++++++|++ +|+|
T Consensus 24 ~~~~~~~~~~~IV~~k~~~---~~~~~~~~~----g~~v~~~------~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V 89 (671)
T 1r6v_A 24 LRDGEYTEGKILVGYNDRS---EVDKIVKAV----NGKVVLE------LP-QIKVVSIKLNGMTVKQAYDKIKALALKGI 89 (671)
T ss_dssp CCTTSBCTTEEEEEESSHH---HHHHHHHHH----TCEEEEE------EG-GGTEEEEECSSCCHHHHHHHHTTSCCSSE
T ss_pred cccCccCCccEEEEECCCc---CHHHHHHhc----CCeEEEE------cC-CCcEEEEEeCCcCHHHHHHHHHhccCCCc
Confidence 3456779999999999842 223334332 2222221 11 1222 34444345677788874 8999
Q ss_pred eEEEeCceeeecccCCcccCCCCCCCccccccccccCcccccccccCCccccccccccccccccccCchhh-hhCCCCCC
Q 040133 118 KDVSVDSSYKRGLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADAL-WGKGYTGA 196 (1013)
Q Consensus 118 ~~Vepd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~W~l~~~~~~~~~~~~i~a~~a-W~~g~tG~ 196 (1013)
++||||+.++..... ..++.......... ...... ....++....+|+++. ++++++ |+. ++|+
T Consensus 90 ~~vepd~~~~l~~p~--~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~W~l~~----------I~~~~a~w~~-~tG~ 154 (671)
T 1r6v_A 90 RYVEPSYKRELIKPT--VVKPNPDMYKIRKP-GLNSTA-RDYGEELSNELWGLEA----------IGVTQQLWEE-ASGT 154 (671)
T ss_dssp EEEECCBCCEECCCE--ECCCCTTTTCSSSS-CCSSST-TCCSSTTGGGCHHHHH----------TTCCHHHHHH-CSCT
T ss_pred eEEecCeEEEecccc--ccCccccccccccc-cccccc-ccccccccccCCchhc----------cCCchhhhhc-cCCC
Confidence 999999887653210 00000000000000 000000 0001223446787764 578888 999 8999
Q ss_pred CcEEEEEcCCCCCCCCCcccc-cccccCC-C-----CCCCCCCCCCcchhhhhhhccCCC--cccccCCCeEEEEEEecC
Q 040133 197 KVKMAIFDTGIRENHPHFRNI-KERTNWT-N-----EDTLNDNLGHGTFVAGVVAGQDAE--CLGFAPDTEIYAFRVFTD 267 (1013)
Q Consensus 197 GV~VaVIDTGId~~Hpdl~~i-~~~~~~~-~-----~~~~~D~~gHGThVAGIIAg~~~~--~~GVAP~A~I~~vrV~~~ 267 (1013)
||+||||||||+.+||||.+. ..++++. + ..+..|.+||||||||+|||..++ +.||||+|+|+++|+++.
T Consensus 155 gV~VAVIDTGVd~~HpdL~~~~~~g~~~~~~~~~p~~~d~~d~~gHGThVAGiIAa~~ng~gv~GVAP~A~I~~vkv~~~ 234 (671)
T 1r6v_A 155 NIIVAVVDTGVDGTHPDLEGQVIAGYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAKKDGKGIVGVAPGAKIMPIVIFDD 234 (671)
T ss_dssp TCEEEEEESCCBTTSGGGTTTBCCEEEGGGTEEECTTCBCCTTCSHHHHHHHHHHCCCSSSSCCCSCTTSEEEEEESBCC
T ss_pred CCEEEEEeCCCCCCCccccccEEecccccCCCcCCCCCCCccCCCcchhhhhhhhccCCCCceEEECCCCEEEEEEeccC
Confidence 999999999999999999853 2322221 1 112345689999999999997543 689999999999999976
Q ss_pred ------CCCCchHHHHHHHHHHHhCCCeEEEecCCCCCCCChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCC
Q 040133 268 ------AQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSD 341 (1013)
Q Consensus 268 ------~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~ 341 (1013)
.+....+.+++||+||++++++|||||||+... ...+.+++.++.++|+++|+||||+|.+ ....+|+.+++
T Consensus 235 ~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~~-s~~l~~Ai~~A~~~GvlvVaAAGN~g~~-~~~~yPA~~~~ 312 (671)
T 1r6v_A 235 PALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWGY-SYTMKEAFDYAMEHGVVMVVSAGNNTSD-SHHQYPAGYPG 312 (671)
T ss_dssp HHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSCC-CHHHHHHHHHHHHTTCEEEEECCSCSSS-CCCCBTTTSTT
T ss_pred ccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCCC-CHHHHHHHHHHHhCCCEEEEeCCCCCCC-CCccCcccCCC
Confidence 223345679999999999999999999998754 4578889999999999999999999975 34689999999
Q ss_pred ceEEeeeecCCC---ccccCCCCCCccccCCCCCCCcceEEecCCceeeecCC------------------CCeeeeCCc
Q 040133 342 VIGVGGIDYNDH---IASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIS------------------TGCKSLSGT 400 (1013)
Q Consensus 342 VItVGAvd~~g~---~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~------------------~~y~~~sGT 400 (1013)
+|+|||++.++. +++|||+|+ .+||+|||.+|+++.+. +.|..++||
T Consensus 313 VItVgA~d~~g~~~~~a~fSn~G~------------~vdv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGT 380 (671)
T 1r6v_A 313 VIQVAALDYYGGTFRVAGFSSRSD------------GVSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGT 380 (671)
T ss_dssp CEEEEEEEEETTEEEECSSSCCCT------------TEEEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESH
T ss_pred eEEEEEEcCCCCceeeccccCCCC------------CeeEEecCCCEEeecCCCCccccccccccccccCCCceEEecCc
Confidence 999999999988 999999996 58999999999998753 368899999
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCC-CCCccccccCHHHHHH
Q 040133 401 SVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPN-MYEQGAGRVDLLESYE 463 (1013)
Q Consensus 401 SmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~-~~~~G~G~lna~~Av~ 463 (1013)
|||||||||++|||++++|+ +++++||++|++||+++.... ...+|||++|+.+|++
T Consensus 381 SmAAP~VAGvaALl~s~~P~------lt~~~Vr~~L~~TA~~~~~~g~d~~~G~G~vna~~Al~ 438 (671)
T 1r6v_A 381 SMAAPHVTGVVAVLLQKFPN------AKPWQIRKLLENTAFDFNGNGWDHDTGYGLVKLDAALQ 438 (671)
T ss_dssp HHHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHHCBCSSSSSCBTTTBTCBCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHHhCcCCCCCCCCCCcccceeCHHHHhh
Confidence 99999999999999999999 999999999999999886543 3468999999999997
No 4
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6.5e-53 Score=492.93 Aligned_cols=355 Identities=22% Similarity=0.318 Sum_probs=278.2
Q ss_pred cCCcEEEEeCCCCChHHHHHHHHhhcCCCCCchhhccCCCccccceeeeEEecccccHHHHHHHHc-CCCceEEEeCcee
Q 040133 48 SRNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIER-LNLVKDVSVDSSY 126 (1013)
Q Consensus 48 v~~~yIV~fk~~~~~~~~~~~l~~~~~~~~~~~v~r~~~~~~~~~~f~v~~v~~~~~~~~i~~L~~-~P~V~~Vepd~~~ 126 (1013)
..+.|||++++ .++.++.+++. +.+++.+ + ..+.++.+ ..+++.+++|++ +|+|++|+|++.+
T Consensus 43 ~~~~yiv~~~~---~~~~~~~~~~~----g~~v~~~------~-~~~~~~~~--~~~~~~~~~L~~~~p~V~~v~~~~~~ 106 (471)
T 3t41_A 43 EELYYSVEYKN---TATFNKLVKKK----SLNVVYN------I-PELHVAQI--KMTKMHANALANYKNDIKYINATCST 106 (471)
T ss_dssp CCEEEEEEESC---HHHHHHHHHHH----TCEEEEE------E-GGGTEEEE--EECHHHHHHHHTCTTTEEEEEECCSS
T ss_pred CceEEEEEcCC---HHHHHHHHHhC----CCEEEEe------c-CCccEEEE--EeCHHHHHHHHhcCCCCcEEEeccee
Confidence 34579998887 23444444443 3332221 2 12344443 456678999999 9999999999887
Q ss_pred eecccCCcccCCCCCCCccccccccccCcccccccccCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCC
Q 040133 127 KRGLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTG 206 (1013)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTG 206 (1013)
+..... . ....+.++....||++..+.. ...+|+.+.+|+||+|||||||
T Consensus 107 ~~~~~~---~------------------~~~~~~~~~~~~~w~l~~i~~---------~~~~~~~~~~G~gv~VaViDtG 156 (471)
T 3t41_A 107 CITSEK---T------------------IDRTSNESLFSRQWDMNKITN---------NGASYDDLPKHANTKIAIIDTG 156 (471)
T ss_dssp CBCCCC---C------------------CCC---CCSCCCCHHHHTTTT---------TTGGGGGCCSSCCCCEEEEESC
T ss_pred cccccc---c------------------cccCCCCccccccccHhhccC---------cHHHHhccCCCCCcEEEEEeCC
Confidence 653220 0 001123445567898876532 1379999999999999999999
Q ss_pred CCCCCCCccccccc--ccCCC--------------CCCCCCCCCCcchhhhhhhccCCCcccccCCCeEEEEEEecCCCC
Q 040133 207 IRENHPHFRNIKER--TNWTN--------------EDTLNDNLGHGTFVAGVVAGQDAECLGFAPDTEIYAFRVFTDAQV 270 (1013)
Q Consensus 207 Id~~Hpdl~~i~~~--~~~~~--------------~~~~~D~~gHGThVAGIIAg~~~~~~GVAP~A~I~~vrV~~~~g~ 270 (1013)
|+.+||+|.+.... .++.. .....|..||||||||||+|++ +..||||+|+|+++|++++ +.
T Consensus 157 id~~Hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g-~~~GvAp~a~l~~~kv~~~-~~ 234 (471)
T 3t41_A 157 VMKNHDDLKNNFSTDSKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANG-KLIGVAPNNKFTMYRVFGS-KK 234 (471)
T ss_dssp CCTTCTTTTTTBCTTCEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBS-SSBCSSTTSCEEEEECCSS-SC
T ss_pred CCCCChhHhcCcccCCcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCC-ceeEECCCCeEEEEEeccC-CC
Confidence 99999999863211 12211 1245678899999999999874 4899999999999999976 45
Q ss_pred CchHHHHHHHHHHHhCCCeEEEecCCCCC---------------CCChHHHHHHHHHhcCCeEEEEeccCCCCCCCC---
Q 040133 271 SYTSWFLDAFNYAIATNIDVLNLSIGGPD---------------YLDLPFIEKIWEITANNIIMVSAIGNDGPLYGT--- 332 (1013)
Q Consensus 271 ~~~s~il~Ai~~Ai~~gadVINlS~G~~~---------------~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~--- 332 (1013)
+..+++++||+||++++++|||||||... .....+.+++..+.++|++||+||||+|.+.+.
T Consensus 235 ~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~ 314 (471)
T 3t41_A 235 TELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQK 314 (471)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHH
T ss_pred CcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccc
Confidence 78889999999999999999999999731 112356778888889999999999999975432
Q ss_pred -------------CCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCc---------------
Q 040133 333 -------------LNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGRE--------------- 384 (1013)
Q Consensus 333 -------------i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~--------------- 384 (1013)
+.+|+..+++|+|||++.++.++.||++|++ .|||+|||++
T Consensus 315 ~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~~~~a~fS~~G~~-----------~~di~APG~~i~~~~~~g~~~~~~~ 383 (471)
T 3t41_A 315 LKLQREYQGNGEVKDVPASMDNVVTVGSTDQKSNLSEFSNFGMN-----------YTDIAAPGGSFAYLNQFGVDKWMNE 383 (471)
T ss_dssp HHHTTTCCSSSEEEEETTTSTTEEEEEEECTTSSBCTTCCBCTT-----------TCCEEEECCCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCceeeccccCCCeEEEEeeCCCCCCCCccCCCCC-----------CCeEEecCCCccccccccccccccc
Confidence 4589999999999999999999999999963 3999999987
Q ss_pred -------eeeecCCCCeeeeCCchhHHHHHHHHHHHHHHhCC-CCCcCCCCCHHHHHHHHHhccccCCCCCCCCcccccc
Q 040133 385 -------IMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIP-ENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRV 456 (1013)
Q Consensus 385 -------I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~~P-~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~l 456 (1013)
|+++.+++.|..++|||||||+|||++|||++++| . ++|++||++|++||.+........+|||+|
T Consensus 384 ~~~~~~~i~s~~~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~~------~~~~~v~~~L~~tA~~~~~~~~~~~G~G~v 457 (471)
T 3t41_A 384 GYMHKENILTTANNGRYIYQAGTALATPKVSGALALIIDKYHLE------KHPDKAIELLYQHGTSKNNKPFSRYGHGEL 457 (471)
T ss_dssp TTHHHHSEEEECTTSSEEEECSHHHHHHHHHHHHHHHHHHHTCT------TCHHHHHHHHHHHSBCCSCCCHHHHTTCBB
T ss_pred ccccCceeEecCCCCCEEeecchHHHHHHHHHHHHHHHHhccCC------CCHHHHHHHHHHhCCCCCCCCcCccccChh
Confidence 89999999999999999999999999999999999 6 999999999999999887655567899999
Q ss_pred CHHHHHHHHHh
Q 040133 457 DLLESYEILKN 467 (1013)
Q Consensus 457 na~~Av~~l~~ 467 (1013)
|+.+|++.+++
T Consensus 458 d~~~Al~~a~~ 468 (471)
T 3t41_A 458 DVYKALNVANQ 468 (471)
T ss_dssp CHHHHTTTTCC
T ss_pred CHHHHHHHHHh
Confidence 99999987654
No 5
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=3.9e-52 Score=454.76 Aligned_cols=267 Identities=32% Similarity=0.517 Sum_probs=237.7
Q ss_pred CccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccccccccCCCCC-CCCCCCCCcchhhhhh
Q 040133 165 TINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKERTNWTNED-TLNDNLGHGTFVAGVV 243 (1013)
Q Consensus 165 ~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~~~~~~~~~~-~~~D~~gHGThVAGII 243 (1013)
..+|+++. ++++++|+.+++|+||+||||||||+.+||+|+ +..+.+|...+ ...|..+|||||||||
T Consensus 3 ~~~w~l~~----------i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-~~~g~~~~~~~~~~~d~~gHGT~vAgii 71 (274)
T 1r0r_E 3 TVPYGIPL----------IKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-VVGGASFVAGEAYNTDGNGHGTHVAGTV 71 (274)
T ss_dssp CCCTHHHH----------TTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-EEEEEECSTTCCTTCCSSSHHHHHHHHH
T ss_pred cCCCchhh----------cCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-CCCCccccCCCCCCCCCCCCHHHHHHHH
Confidence 35788775 689999999999999999999999999999995 34445554433 3568899999999999
Q ss_pred hccCCC--cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEecCCCCCCCChHHHHHHHHHhcCCeEEEE
Q 040133 244 AGQDAE--CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVS 321 (1013)
Q Consensus 244 Ag~~~~--~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~~~~~~~~ai~~a~~~GIivVa 321 (1013)
+|..++ +.||||+|+|+.+|+++..+.+..+.+++||+||++++++|||||||.... ...+.+++.++.++|+++|+
T Consensus 72 a~~~~~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gi~vV~ 150 (274)
T 1r0r_E 72 AALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGASG-STAMKQAVDNAYARGVVVVA 150 (274)
T ss_dssp HCCSSSSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSSC-CHHHHHHHHHHHHTTCEEEE
T ss_pred HccCCCCceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCCCCC-cHHHHHHHHHHHHCCCEEEE
Confidence 997543 689999999999999988777788899999999999999999999998754 45688899999999999999
Q ss_pred eccCCCCC--CCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCC
Q 040133 322 AIGNDGPL--YGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSG 399 (1013)
Q Consensus 322 AAGN~G~~--~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sG 399 (1013)
||||+|.. .....+|+..+++|+||+++.++.++.||++|+ +|||+|||.+|.++.+++.|..++|
T Consensus 151 AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~------------~~di~APG~~i~s~~~~~~~~~~sG 218 (274)
T 1r0r_E 151 AAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSNSNRASFSSVGA------------ELEVMAPGAGVYSTYPTNTYATLNG 218 (274)
T ss_dssp ECCSCCCCTTCCCCCBTTTSTTSEEEEEECTTSCBCTTCCCST------------TEEEEEECSSEEEEETTTEEEEECS
T ss_pred eCCCCCCCCCCccccCCCCCCcEEEEEEecCCCCcCccCCCCC------------CceEEeCCCCeEeecCCCCEEEecc
Confidence 99999975 235778999999999999999999999999996 7999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 040133 400 TSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYE 463 (1013)
Q Consensus 400 TSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~Av~ 463 (1013)
||||||+|||++|||++++|+ +++++||++|++||+++. ....+|+|+||+.+|++
T Consensus 219 TS~AaP~vaG~aAll~~~~p~------lt~~~v~~~L~~tA~~~g--~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 219 TSMASPHVAGAAALILSKHPN------LSASQVRNRLSSTATYLG--SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHSTT------CCHHHHHHHHHHTCBCCS--CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHHhCcccC--CCCCcccCccCHHHHhC
Confidence 999999999999999999999 999999999999999885 34568999999999973
No 6
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.1e-51 Score=452.59 Aligned_cols=271 Identities=30% Similarity=0.404 Sum_probs=233.1
Q ss_pred cccccC-CccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCCC-CCCCCCCC
Q 040133 159 ATTSNC-TINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNED-TLNDNLGH 235 (1013)
Q Consensus 159 ~~~~~~-~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~~-~~~D~~gH 235 (1013)
|+++.. ..||+++. ++++++|+.+.+|+||+||||||||+.+||+|.+ +..+++|...+ .+.|..+|
T Consensus 3 pndp~~~~~~w~l~~----------i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~~~~~~~~~~~~~~~~d~~gH 72 (280)
T 1dbi_A 3 PNDTYYQGYQYGPQN----------TYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGKVIKGYDFVDNDYDPMDLNNH 72 (280)
T ss_dssp CCCTTHHHHCCTTGG----------GTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTTEEEEEETTTTBSCCCCSSSH
T ss_pred CCCcccccCCCChhh----------cCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccCcccceeccCCCCCCCCCCCc
Confidence 344555 67898775 5889999999888899999999999999999985 44556665443 45688999
Q ss_pred cchhhhhhhccCCC---cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEecCCCCCCCChHHHHHHHHH
Q 040133 236 GTFVAGVVAGQDAE---CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEI 312 (1013)
Q Consensus 236 GThVAGIIAg~~~~---~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~~~~~~~~ai~~a 312 (1013)
||||||||+|..++ +.||||+|+|+.+|+++..+.+..+++++||+||++++++|||||||.... ...+.+++.++
T Consensus 73 GT~vAgiia~~~~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~-~~~~~~ai~~a 151 (280)
T 1dbi_A 73 GTHVAGIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCDCH-TTTLENAVNYA 151 (280)
T ss_dssp HHHHHHHHHCCCSSSSSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSCCC-CHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCCcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCCC-CHHHHHHHHHH
Confidence 99999999997543 689999999999999988777888999999999999999999999998754 45688889999
Q ss_pred hcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCC
Q 040133 313 TANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIST 392 (1013)
Q Consensus 313 ~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~ 392 (1013)
.++|+++|+||||+|.. ...+|+.++++|+|||++..+.++.||++|+ +|||+|||.+|.++..++
T Consensus 152 ~~~gilvV~AAGN~g~~--~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~------------~~dv~ApG~~i~s~~~~~ 217 (280)
T 1dbi_A 152 WNKGSVVVAAAGNNGSS--TTFEPASYENVIAVGAVDQYDRLASFSNYGT------------WVDVVAPGVDIVSTITGN 217 (280)
T ss_dssp HHTTCEEEEECCBC-----------CCTTSEEEEEECTTSCBCTTBCCST------------TCCEEEECSSEEEEETTT
T ss_pred HHCCCEEEEECCCCCCC--CCCCccccCCeEEEEeeCCCCCcCCCCCCCC------------CceEEEecCCeEeecCCC
Confidence 99999999999999973 4578999999999999999999999999996 699999999999999999
Q ss_pred CeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 040133 393 GCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYE 463 (1013)
Q Consensus 393 ~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~Av~ 463 (1013)
.|..++|||||||+|||++|||++ |. +++++||++|++||+++...+ ..+|+|+||+.+|++
T Consensus 218 ~~~~~sGTS~AaP~vaG~aAll~~--p~------~t~~~v~~~L~~ta~~~~~~~-~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 218 RYAYMSGTSMASPHVAGLAALLAS--QG------RNNIEIRQAIEQTADKISGTG-TYFKYGRINSYNAVT 279 (280)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHH--TT------CCHHHHHHHHHHTSBCCTTBT-TTBSSEECCHHHHHT
T ss_pred CEEEccCHHHHHHHHHHHHHHHHC--CC------CCHHHHHHHHHHhCccCCCCC-CcccCCEECHHHHhc
Confidence 999999999999999999999987 77 899999999999999987654 468999999999985
No 7
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.1e-51 Score=450.20 Aligned_cols=264 Identities=30% Similarity=0.484 Sum_probs=236.1
Q ss_pred CccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccccccccCCCCC-CCCCCCCCcchhhhhh
Q 040133 165 TINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKERTNWTNED-TLNDNLGHGTFVAGVV 243 (1013)
Q Consensus 165 ~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~~~~~~~~~~-~~~D~~gHGThVAGII 243 (1013)
..+|+++. |+++++|+.+++|+||+|||||||| .+||+|+ +..+.+|...+ ...|..||||||||+|
T Consensus 3 ~~~W~l~~----------i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-~~~~~~~~~~~~~~~d~~gHGT~vAgii 70 (269)
T 1gci_A 3 SVPWGISR----------VQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-IRGGASFVPGEPSTQDGNGHGTHVAGTI 70 (269)
T ss_dssp CCCHHHHH----------TTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-EEEEEECSTTCCSCSCSSSHHHHHHHHH
T ss_pred cCCcChhh----------cCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-ccCCcccCCCCCCCCCCCCChHHHHHHH
Confidence 35788765 6899999999999999999999999 8999995 44455555433 4578899999999999
Q ss_pred hccCCC--cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEecCCCCCCCChHHHHHHHHHhcCCeEEEE
Q 040133 244 AGQDAE--CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVS 321 (1013)
Q Consensus 244 Ag~~~~--~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~~~~~~~~ai~~a~~~GIivVa 321 (1013)
+|..++ +.||||+|+|+.+|+++..+.+..+.+++||+|+++++++|||||||.+.. ...+.+++.++.++|+++|+
T Consensus 71 a~~~~~~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gv~vV~ 149 (269)
T 1gci_A 71 AALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSP-SATLEQAVNSATSRGVLVVA 149 (269)
T ss_dssp HCCCSSSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBSSC-CHHHHHHHHHHHHTTCEEEE
T ss_pred hcCcCCCCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCCC-CHHHHHHHHHHHHCCCEEEE
Confidence 997543 689999999999999988777888999999999999999999999998754 45688889999999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCCch
Q 040133 322 AIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTS 401 (1013)
Q Consensus 322 AAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sGTS 401 (1013)
||||+|.. ...+|+.++++|+||+++.++.++.||++|+ +|||+|||.+|.++.+++.|..++|||
T Consensus 150 AaGN~g~~--~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~------------~~di~APG~~i~s~~~~~~~~~~sGTS 215 (269)
T 1gci_A 150 ASGNSGAG--SISYPARYANAMAVGATDQNNNRASFSQYGA------------GLDIVAPGVNVQSTYPGSTYASLNGTS 215 (269)
T ss_dssp ECCSSCCS--SCCBTTTSTTEEEEEEECTTSCBCTTCCCST------------TEEEEEECSSEEEEETTTEEEEECSHH
T ss_pred ecCCCCCC--CCcCCccCCCeEEEEeecCCCCCCCCCCCCC------------CcceEecCCCeEeecCCCCEEEcCcHH
Confidence 99999974 5789999999999999999999999999996 599999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 040133 402 VASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYE 463 (1013)
Q Consensus 402 mAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~Av~ 463 (1013)
||||+|||++|||++++|+ |++++||++|++||+++. ....+|||+||+.+|++
T Consensus 216 ~AaP~vaG~aAll~~~~p~------~t~~~v~~~L~~tA~~~g--~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 216 MATPHVAGAAALVKQKNPS------WSNVQIRNHLKNTATSLG--STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHTSBCCS--CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHHHHHHHhCCC------CCHHHHHHHHHHhCccCC--CCCCcccCccCHHHHcC
Confidence 9999999999999999999 999999999999999885 34568999999999973
No 8
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=9.8e-52 Score=453.30 Aligned_cols=266 Identities=32% Similarity=0.545 Sum_probs=237.0
Q ss_pred ccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccccccccCCCCC--CCCCCCCCcchhhhhh
Q 040133 166 INWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKERTNWTNED--TLNDNLGHGTFVAGVV 243 (1013)
Q Consensus 166 ~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~~~~~~~~~~--~~~D~~gHGThVAGII 243 (1013)
.+|+++. |+++.+|+.+++|+||+||||||||+.+||+|+. ..+.++...+ +..|..+|||||||||
T Consensus 4 ~~w~l~~----------i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-~~g~~~~~~~~~~~~d~~gHGT~vAgii 72 (281)
T 1to2_E 4 VPYGVSQ----------IKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-AGGASMVPSETNPFQDNNSHGTHVAGTV 72 (281)
T ss_dssp CCHHHHH----------TTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-EEEEECCTTCCCTTCCSSSHHHHHHHHH
T ss_pred CCcchhh----------cChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-cCCccccCCCCCCCCCCCCcHHHHHHHH
Confidence 5788775 6899999999999999999999999999999963 3344454332 2468899999999999
Q ss_pred hccCCC--cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEecCCCCCCCChHHHHHHHHHhcCCeEEEE
Q 040133 244 AGQDAE--CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVS 321 (1013)
Q Consensus 244 Ag~~~~--~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~~~~~~~~ai~~a~~~GIivVa 321 (1013)
+|..++ +.||||+|+|+.+|+++..+.+..++++++|+|+++++++|||||||.+.. ...+.+++.++.++|+++|+
T Consensus 73 a~~~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gi~vV~ 151 (281)
T 1to2_E 73 AALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGPSG-SAALKAAVDKAVASGVVVVA 151 (281)
T ss_dssp HCCSSSSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSCC-CHHHHHHHHHHHHTTCEEEE
T ss_pred hccCCCCcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCCCC-CHHHHHHHHHHHHCCCEEEE
Confidence 997543 689999999999999988777788999999999999999999999998754 45788899999999999999
Q ss_pred eccCCCCC--CCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCC
Q 040133 322 AIGNDGPL--YGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSG 399 (1013)
Q Consensus 322 AAGN~G~~--~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sG 399 (1013)
||||+|.. .....+|+..+++|+|||++.++.++.||++|+ +|||+|||.+|.++.+++.|..++|
T Consensus 152 AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~------------~~di~APG~~i~s~~~~~~~~~~sG 219 (281)
T 1to2_E 152 AAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGP------------ELDVMAPGVSIQSTLPGNKYGAYNG 219 (281)
T ss_dssp ECCSCCCCTTSCCCCBTTTSTTSEEEEEECTTSCBCTTCCCST------------TCCEEEECSSEEEEETTTEEEEECB
T ss_pred ECCCCCCCCCCCccccCcCCCCEEEEEEecCCCCcCCcCCCCC------------CceEEecCCCeEeecCCCCEEecCc
Confidence 99999975 235778999999999999999999999999996 6999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 040133 400 TSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYE 463 (1013)
Q Consensus 400 TSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~Av~ 463 (1013)
||||||+|||++|||++++|+ |++++||++|++||+++. ....+|||+||+.+|++
T Consensus 220 TS~AaP~vaG~aAll~~~~p~------lt~~~v~~~L~~tA~~~g--~~~~~G~G~v~~~~a~~ 275 (281)
T 1to2_E 220 TSMASPHVAGAAALILSKHPN------WTNTQVRSSLENTTTKLG--DSFYYGKGLINVQAAAQ 275 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHSTT------CCHHHHHHHHHTTCBCCS--CHHHHTTCBCCHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhCCC------CCHHHHHHHHHhhCcccC--CCCCcccceecHHHHhh
Confidence 999999999999999999999 999999999999999885 34578999999999986
No 9
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=3.3e-51 Score=494.62 Aligned_cols=266 Identities=26% Similarity=0.390 Sum_probs=222.4
Q ss_pred chhhhhCCCCCCCcEEEEEcCCCCCCCCCcccc----------------------------cccccCC------------
Q 040133 185 ADALWGKGYTGAKVKMAIFDTGIRENHPHFRNI----------------------------KERTNWT------------ 224 (1013)
Q Consensus 185 a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i----------------------------~~~~~~~------------ 224 (1013)
...+|+.+.+|+||+||||||||+.+||+|.+. ....+|.
T Consensus 13 ~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~~~~~~~~~~~~~ 92 (649)
T 3i6s_A 13 SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFNKGILANDPTVNI 92 (649)
T ss_dssp SSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECCHHHHHHCTTCCC
T ss_pred chhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEeccCccccccccccc
Confidence 356999999999999999999999999999751 1111221
Q ss_pred CCCCCCCCCCCcchhhhhhhccCCC-----------cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEe
Q 040133 225 NEDTLNDNLGHGTFVAGVVAGQDAE-----------CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNL 293 (1013)
Q Consensus 225 ~~~~~~D~~gHGThVAGIIAg~~~~-----------~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINl 293 (1013)
+...+.|.+||||||||||||+.++ +.||||+|+|+++|+++..+ +..+++++||+||+++|++||||
T Consensus 93 ~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~Ai~~A~~~gvdVIn~ 171 (649)
T 3i6s_A 93 TMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG-TFTSDLIAAMDQAVADGVDMISI 171 (649)
T ss_dssp TTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-ECHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-CCHHHHHHHHHHHHHcCCCEEEe
Confidence 1134668899999999999997532 47999999999999998876 78899999999999999999999
Q ss_pred cCCCCC--CCChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeec---------------------
Q 040133 294 SIGGPD--YLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDY--------------------- 350 (1013)
Q Consensus 294 S~G~~~--~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~--------------------- 350 (1013)
|||+.. .....+..++..+.++|+++|+||||+|+... ..|+..+++|+|||++.
T Consensus 172 SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~--t~~~~ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl 249 (649)
T 3i6s_A 172 SYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIG--SLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSL 249 (649)
T ss_dssp CCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTT--CCSCCCTTSEEEEEEECSCEEEEEEEETTSCEEEEECC
T ss_pred CCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCC--ccCCCCCceEEEeeeecccceeeEEEeCCCcEEeeeec
Confidence 999753 22345667788899999999999999998644 45778899999998321
Q ss_pred --------------------------------------------------------------------------------
Q 040133 351 -------------------------------------------------------------------------------- 350 (1013)
Q Consensus 351 -------------------------------------------------------------------------------- 350 (1013)
T Consensus 250 ~~~~~~~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~ 329 (649)
T 3i6s_A 250 FPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPG 329 (649)
T ss_dssp CSSCBCEEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCE
T ss_pred ccCcccCcceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccccccccCcCCE
Confidence
Q ss_pred ------------------------------------CCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCC---
Q 040133 351 ------------------------------------NDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIS--- 391 (1013)
Q Consensus 351 ------------------------------------~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~--- 391 (1013)
.+.++.|||||++ +...+++||||+|||.+|+++++.
T Consensus 330 ~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~----~~~~~ilKPDI~APG~~Ilsa~~~~~~ 405 (649)
T 3i6s_A 330 VVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPS----RSYLGISKPDILAPGVLILAAYPPNVF 405 (649)
T ss_dssp EEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSC----TTCTTSCSCCEEEECSSEEEECCTTSC
T ss_pred EEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCC----CCCCCccCCeEEeCCCCeEeecCCCCC
Confidence 2345789999964 224589999999999999999876
Q ss_pred -----------CCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCC-------------C
Q 040133 392 -----------TGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGP-------------N 447 (1013)
Q Consensus 392 -----------~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~-------------~ 447 (1013)
..|..++|||||||||||+||||+|++|+ |+|++||++||+||.+++.. .
T Consensus 406 ~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~------~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~ 479 (649)
T 3i6s_A 406 ATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPE------WSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAAT 479 (649)
T ss_dssp CEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTT------CCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCC
T ss_pred ccccccccccccceecccccccccHHHHHHHHHHHHhCCC------CCHHHHHHHHhcccccccCCCCcccccccCCcCC
Confidence 67999999999999999999999999999 99999999999999987542 2
Q ss_pred CCCccccccCHHHHHH
Q 040133 448 MYEQGAGRVDLLESYE 463 (1013)
Q Consensus 448 ~~~~G~G~lna~~Av~ 463 (1013)
++.+|+|+||+.+|++
T Consensus 480 ~~~~GaG~vn~~~A~~ 495 (649)
T 3i6s_A 480 PLDMGAGHVDPNRALD 495 (649)
T ss_dssp HHHHTTCBCCHHHHTC
T ss_pred cCCCCeeeeCHHHhcC
Confidence 4578999999999986
No 10
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=5.7e-51 Score=446.65 Aligned_cols=269 Identities=29% Similarity=0.414 Sum_probs=237.6
Q ss_pred ccccCC-ccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCC-CCCCCCCCCc
Q 040133 160 TTSNCT-INWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNE-DTLNDNLGHG 236 (1013)
Q Consensus 160 ~~~~~~-~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~-~~~~D~~gHG 236 (1013)
+++... .||+++. ++++++|+.+ +|+||+||||||||+.+||+|.+ +..+++|... ..+.|..+||
T Consensus 4 ndp~~~~~~w~l~~----------i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~~~~d~~gHG 72 (279)
T 1thm_A 4 NDPYFSSRQYGPQK----------IQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTPQNGNGHG 72 (279)
T ss_dssp CCTTHHHHCCHHHH----------TTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTTEEEEEETTTTBSCCCCSSSHH
T ss_pred CCCCCCccccChhh----------CChHHHHhcC-CCCCCEEEEEccCCCCCCcchhcCccccccccCCCCCCCCCCCcH
Confidence 344443 7888765 6899999997 89999999999999999999995 3445666543 3457889999
Q ss_pred chhhhhhhccCCC---cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEecCCCCCCCChHHHHHHHHHh
Q 040133 237 TFVAGVVAGQDAE---CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEIT 313 (1013)
Q Consensus 237 ThVAGIIAg~~~~---~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~~~~~~~~ai~~a~ 313 (1013)
|||||||+|..++ +.||||+|+|+.+|+++..+.+..+.+++||+||++++++|||||||.... ...+.+++.++.
T Consensus 73 T~vAgiia~~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~-~~~l~~ai~~a~ 151 (279)
T 1thm_A 73 THCAGIAAAVTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTVG-NSGLQQAVNYAW 151 (279)
T ss_dssp HHHHHHHHCCCSSSSSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSSC-CHHHHHHHHHHH
T ss_pred HHHHHHHhCccCCCCccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCCCCC-CHHHHHHHHHHH
Confidence 9999999997543 689999999999999988777888999999999999999999999998754 457888999999
Q ss_pred cCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCC
Q 040133 314 ANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTG 393 (1013)
Q Consensus 314 ~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~ 393 (1013)
++|+++|+||||+|.. ...+|+..+++|+||+++.++.++.||++|+ +|||+|||.+|.++.+++.
T Consensus 152 ~~gvlvV~AAGN~g~~--~~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~------------~~dv~APG~~i~s~~~~~~ 217 (279)
T 1thm_A 152 NKGSVVVAAAGNAGNT--APNYPAYYSNAIAVASTDQNDNKSSFSTYGS------------WVDVAAPGSSIYSTYPTST 217 (279)
T ss_dssp HTTCEEEEECCSSSSC--CCCBTTTSTTEEEEEEECTTSCBCTTCCCCT------------TCCEEEECSSEEEEETTTE
T ss_pred HCCCEEEEeCCCCCCC--CCCCcccCCCeEEEEEeCCCCCcCCcCCCCC------------ceEEEEcCCCeEEEeCCCC
Confidence 9999999999999974 4568999999999999999999999999995 6999999999999999999
Q ss_pred eeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 040133 394 CKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYE 463 (1013)
Q Consensus 394 y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~Av~ 463 (1013)
|..++|||||||+|||++||| ++|. +++++||++|++||+++.... ..+|+|+||+.+|++
T Consensus 218 ~~~~sGTS~AaP~VaG~aAll--~~p~------~t~~~v~~~L~~ta~~~~~~~-~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 218 YASLSGTSMATPHVAGVAGLL--ASQG------RSASNIRAAIENTADKISGTG-TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp EEEECSHHHHHHHHHHHHHHH--HTTT------CCHHHHHHHHHHTCBCCTTBT-TTBSSEECCHHHHHH
T ss_pred EEEcccHHHHHHHHHHHHHHH--HCCC------cCHHHHHHHHHHhCccCCCCC-ccccCCeeCHHHHhc
Confidence 999999999999999999999 4687 999999999999999987765 468999999999986
No 11
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.3e-51 Score=461.73 Aligned_cols=279 Identities=27% Similarity=0.478 Sum_probs=239.5
Q ss_pred cCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCC-----CCCCCCCCCc
Q 040133 163 NCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNE-----DTLNDNLGHG 236 (1013)
Q Consensus 163 ~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~-----~~~~D~~gHG 236 (1013)
....+|+++. ++++++|+.+++|+||+||||||||+.+||+|.+ +..+.+|..+ +...|..|||
T Consensus 18 ~~~~~w~l~~----------i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~d~~gHG 87 (327)
T 2x8j_A 18 LSEVPMGVEI----------VEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAERIIGGVNLTTDYGGDETNFSDNNGHG 87 (327)
T ss_dssp CBSCCHHHHH----------TTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGGEEEEEECSSGGGGCTTCCCCSSSHH
T ss_pred ccccCcchhh----------cChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhcccCCccccCCCCCCCCCCCCCCCch
Confidence 3556788775 6899999999999999999999999999999985 4445555443 2346889999
Q ss_pred chhhhhhhccCCC--cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHh------CCCeEEEecCCCCCCCChHHHHH
Q 040133 237 TFVAGVVAGQDAE--CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIA------TNIDVLNLSIGGPDYLDLPFIEK 308 (1013)
Q Consensus 237 ThVAGIIAg~~~~--~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~------~gadVINlS~G~~~~~~~~~~~a 308 (1013)
|||||||+|..++ ..||||+|+|+++|+++..+.+..+++++||+||++ .+++|||||||.+.. ...+.++
T Consensus 88 T~VAgiia~~~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin~S~G~~~~-~~~~~~a 166 (327)
T 2x8j_A 88 THVAGTVAAAETGSGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRIITMSLGGPTD-SEELHDA 166 (327)
T ss_dssp HHHHHHHHCCCCSSBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSEEEECEEBSCC-CHHHHHH
T ss_pred HHHHHHHhccCCCCCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceEEEECCCcCCC-CHHHHHH
Confidence 9999999997543 689999999999999988777788999999999999 899999999998754 4568889
Q ss_pred HHHHhcCCeEEEEeccCCCCCC---CCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCce
Q 040133 309 IWEITANNIIMVSAIGNDGPLY---GTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREI 385 (1013)
Q Consensus 309 i~~a~~~GIivVaAAGN~G~~~---~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I 385 (1013)
+.++.++|+++|+||||+|... ..+.+|+..+++|+|||++.++.++.||++|+ +|||+|||.+|
T Consensus 167 i~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~------------~~di~APG~~i 234 (327)
T 2x8j_A 167 VKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFDLRLSDFTNTNE------------EIDIVAPGVGI 234 (327)
T ss_dssp HHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTTCCBSCC---CC------------CCSEEEECSSE
T ss_pred HHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCCCCCCCccCCCC------------CceEecCcCce
Confidence 9999999999999999999752 35789999999999999999999999999996 79999999999
Q ss_pred eeecCCCCeeeeCCchhHHHHHHHHHHHHHHh-----CCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 040133 386 MGSKISTGCKSLSGTSVASPVVAGVVCLLVSV-----IPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLE 460 (1013)
Q Consensus 386 ~St~~~~~y~~~sGTSmAAP~VAGvaALLls~-----~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~ 460 (1013)
.++.++++|..++|||||||+|||++|||+++ +|. +++.+||++|++||+++.. ....+|+|+||+.+
T Consensus 235 ~s~~~~~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~------ls~~~v~~~L~~tA~~~g~-~~~~~G~G~vd~~~ 307 (327)
T 2x8j_A 235 KSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFKRS------LSETEIYAQLVRRATPIGF-TAQAEGNGFLTLDL 307 (327)
T ss_dssp EEECSTTCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSC------CCHHHHHHHHHTTEECCSS-CHHHHTTCEECTTH
T ss_pred EeecCCCCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCC------CCHHHHHHHHHHhCccCCC-CCCceeeeEECHHH
Confidence 99999999999999999999999999999999 998 9999999999999998853 34578999999999
Q ss_pred HHHHHHhcCCC
Q 040133 461 SYEILKNYQPR 471 (1013)
Q Consensus 461 Av~~l~~~~p~ 471 (1013)
|+++++++..+
T Consensus 308 A~~~~~~~~~~ 318 (327)
T 2x8j_A 308 VERITGQFTEK 318 (327)
T ss_dssp HHHHTTCCC--
T ss_pred HHHhhhccccc
Confidence 99999876643
No 12
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=3.9e-50 Score=473.72 Aligned_cols=390 Identities=19% Similarity=0.168 Sum_probs=293.7
Q ss_pred cccccCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccccc---ccccCCCCCC----CCC
Q 040133 159 ATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIK---ERTNWTNEDT----LND 231 (1013)
Q Consensus 159 ~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~---~~~~~~~~~~----~~D 231 (1013)
+.++....||++++..+ ....|++..+|+.+++|+||+||||||||+.+||+|.+.. ..++|...+. ..|
T Consensus 20 ~~Dp~~~~qW~l~~~~~---~g~~i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~~~p~~d 96 (503)
T 2id4_A 20 INDPLFERQWHLVNPSF---PGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPRLS 96 (503)
T ss_dssp CCCTTGGGCTTTSCSSS---TTCSCCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBCGGGCEETTTTBSCCCCCST
T ss_pred CCCCChhhccCcCCCCC---cccccChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcccccCcccCCCCCCCCCCCCC
Confidence 45666778999987654 3457899999999999999999999999999999998532 2455554322 257
Q ss_pred CCCCcchhhhhhhccCCC---cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEecCCCCCC------CC
Q 040133 232 NLGHGTFVAGVVAGQDAE---CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDY------LD 302 (1013)
Q Consensus 232 ~~gHGThVAGIIAg~~~~---~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~------~~ 302 (1013)
..||||||||+|||..++ +.||||+|+|+++|+++.. ...+.+++||+|+++++ +|||||||.... ..
T Consensus 97 ~~gHGT~vAGiiaa~~~n~~~~~GvAp~a~i~~~rv~~~~--~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~~~ 173 (503)
T 2id4_A 97 DDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGD--ITTEDEAASLIYGLDVN-DIYSCSWGPADDGRHLQGPS 173 (503)
T ss_dssp TTTHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECTTSC--CCHHHHHHHTTTTTTTC-SEEEECEESCCSSSCCBCCC
T ss_pred CCChHHHHHHHHHhccCCCCCcEEECCCCEEEEEEeeCCC--CChHHHHHHHHhHhhcC-CEEEeCCCcCCCCccccCch
Confidence 789999999999997632 5899999999999998743 57788999999999988 999999997532 23
Q ss_pred hHHHHHHHHHhc-----CCeEEEEeccCCCCCCCCCCC--CCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCc
Q 040133 303 LPFIEKIWEITA-----NNIIMVSAIGNDGPLYGTLNN--PADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVK 375 (1013)
Q Consensus 303 ~~~~~ai~~a~~-----~GIivVaAAGN~G~~~~~i~~--PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~K 375 (1013)
..+.+++.++.+ +|+++|+||||+|.......+ +++.+++|+|||++.++.+++||++|+ .
T Consensus 174 ~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~~~~a~~S~~g~------------~ 241 (503)
T 2id4_A 174 DLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCS------------A 241 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTTSCCCTTCCCCT------------T
T ss_pred HHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCCCCcCCcCCCCC------------c
Confidence 446677777663 799999999999975433333 346788999999999999999999996 3
Q ss_pred ceEEe----cCCceeeec-CCCCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCC----
Q 040133 376 PDVVA----YGREIMGSK-ISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGP---- 446 (1013)
Q Consensus 376 pDI~A----PG~~I~St~-~~~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~---- 446 (1013)
+|++| ||..|+++. .+++|..++|||||||+|||++|||++++|+ |++++||++|++||+++...
T Consensus 242 ~~~~a~~~gpG~~I~st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~------lt~~~v~~~L~~tA~~~~~~~~~~ 315 (503)
T 2id4_A 242 VMAVTYSSGSGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPN------LTWRDVQYLSILSAVGLEKNADGD 315 (503)
T ss_dssp EEEEEECSBTTBCEEEECSTTCEEEEECSHHHHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHHCBCCTTCGGGC
T ss_pred ceEeecCCCCCCceEeecCCCCceecCCCccccchhhhHHHHHHHHhCCC------CCHHHHHHHHHhccccCCCCcCCC
Confidence 68887 899999994 4567899999999999999999999999999 99999999999999987654
Q ss_pred ---------CCCCccccccCHHHHHHHHHhcCCCcccCCcccccCCCCCCCCcccccccCCCccEEEEEEeecCCC----
Q 040133 447 ---------NMYEQGAGRVDLLESYEILKNYQPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPVIFNVTILNGWE---- 513 (1013)
Q Consensus 447 ---------~~~~~G~G~lna~~Av~~l~~~~p~~~~~p~~l~~~~~~~~~p~~~~~~~~g~~pvt~n~ti~n~~~---- 513 (1013)
....+|||+||+.+|++.+++++.. .|... +.. .|......+..+...++..+++.....
T Consensus 316 ~~~~~~g~~~~~~~G~G~vda~~Av~~a~~~~~~---~~~~~-~~~---~~~~~~~~Ip~~~~~~~~~i~v~~~~~~~~~ 388 (503)
T 2id4_A 316 WRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWENV---NAQTW-FYL---PTLYVSQSTNSTEETLESVITISEKSLQDAN 388 (503)
T ss_dssp CEECSSSSEEBTTTBTCBCCHHHHHHHHTSCCCC---CCEEE-EEC---CCBCCCEEECCTTCCEEEEEEECHHHHHHTT
T ss_pred ceecCCCCccCcccCCcEecHHHHHHHHhccCcC---Cccce-eec---cccccccccCCCCCceeEEEEEccccccccc
Confidence 1236899999999999999987742 22211 110 111112223334445666666543220
Q ss_pred -CCeeEEEEEcceeeeecccEEEEEEEEcCCC-------ccceeeEEeEEEEEEEcCCCCCCCCCcceeEEEEEEEE
Q 040133 514 -GNLLNIRFTYSEVIWPWTGYLALHMQIKEEG-------AKFSGEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLK 582 (1013)
Q Consensus 514 -g~~~~v~~s~s~v~~p~~G~~~v~vtv~~~~-------~~f~g~~~G~v~~tv~s~~~~~~~~~~~~~~~~~v~v~ 582 (1013)
....+|.++.+ +.++..|.+.|+++.+... +..+....|...+++++...++|+ -.++|+|.|+..
T Consensus 389 ~~~lE~V~v~v~-i~h~~rgdL~i~L~SP~Gt~s~L~~~r~~d~~~~g~~~~~f~s~~~~GE~--~~G~WtL~V~d~ 462 (503)
T 2id4_A 389 FKRIEHVTVTVD-IDTEIRGTTTVDLISPAGIISNLGVVRPRDVSSEGFKDWTFMSVAHWGEN--GVGDWKIKVKTT 462 (503)
T ss_dssp EEEEEEEEEEEE-EEESSGGGEEEEEECTTCCEEEEECCCTTCCCSSCEEEEEEEESTTTTCC--CCEEEEEEEEES
T ss_pred ceeEEEEEEEEE-eccCCCceEEEEEECCCCCEEEeecCCCCCcccCCcccceEecccccCCC--CCccEEEEEEeC
Confidence 02345555444 6789999999988755443 222222357789999998888764 466788877754
No 13
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=7.6e-51 Score=456.35 Aligned_cols=280 Identities=26% Similarity=0.376 Sum_probs=241.4
Q ss_pred cccccCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCC-----------
Q 040133 159 ATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNE----------- 226 (1013)
Q Consensus 159 ~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~----------- 226 (1013)
|+++....||++.. ...++++++|+.+++|+||+||||||||+ +||+|.+ +...+++...
T Consensus 2 PnDp~~~~qW~l~~-------~~~i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~~~~~~~~~~~~~d~~~~~ 73 (340)
T 3lpc_A 2 PNDQHYREQWHYFD-------RYGVKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLPGYDFISNSQISLDGDGRD 73 (340)
T ss_dssp CCCTTGGGCHHHHS-------TTSCCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCCCEECCCCHHHHCSSSSSB
T ss_pred CCCcchhhccCCCC-------cCCCCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccccCccccCCccccccCCCcc
Confidence 45666778998765 13589999999999999999999999998 9999984 3333333211
Q ss_pred ----------------------CCCCCCCCCcchhhhhhhccCCC---cccccCCCeEEEEEEecCCCCCchHHHHHHHH
Q 040133 227 ----------------------DTLNDNLGHGTFVAGVVAGQDAE---CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFN 281 (1013)
Q Consensus 227 ----------------------~~~~D~~gHGThVAGIIAg~~~~---~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~ 281 (1013)
....|..||||||||||+|..++ +.||||+|+|+.+|+++..+ +..++++++|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g~~GvAp~a~l~~~~v~~~~~-~~~~~~~~ai~ 152 (340)
T 3lpc_A 74 ADPFDEGDWFDNWACGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRIGVAGVAYGAKVVPVRALGRCG-GYDSDISDGLY 152 (340)
T ss_dssp SCCBCCCCCBCTTTTSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSSCCCTTTTSEEEEEECCBTTB-CCHHHHHHHHH
T ss_pred CCccccccccccccccCCCCcccCCCCCCCCHHHHHHHHHccCCCCCcceeecCCCEEEEEEEecCCC-CcHHHHHHHHH
Confidence 01356778999999999997644 68999999999999998776 78889999999
Q ss_pred HHHh----------CCCeEEEecCCCCCCCChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecC
Q 040133 282 YAIA----------TNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYN 351 (1013)
Q Consensus 282 ~Ai~----------~gadVINlS~G~~~~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~ 351 (1013)
||++ ++++|||||||........+.+++.++.++|++||+||||+|... ...+|+..+++|+|||++.+
T Consensus 153 ~a~~~~~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~ 231 (340)
T 3lpc_A 153 WAAGGRIAGIPENRNPAKVINMSLGSDGQCSYNAQTMIDRATRLGALVVVAAGNENQNA-SNTWPTSCNNVLSVGATTSR 231 (340)
T ss_dssp HHHTCCCTTSCCCSSCCSEEEECCCEESCCCHHHHHHHHHHHHHTCEEEEECCSSSSBG-GGEETTTSSSCEEEEEECTT
T ss_pred HHhcccccccccccCCCeEEEeCcCCCCCcchhHHHHHHHHHhCCcEEEEeCCCCCCCC-CCcCCccCCceEEEecCCCC
Confidence 9998 899999999998766667788889999999999999999999753 44689999999999999999
Q ss_pred CCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCC-------eeeeCCchhHHHHHHHHHHHHHHh-C---CC
Q 040133 352 DHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTG-------CKSLSGTSVASPVVAGVVCLLVSV-I---PE 420 (1013)
Q Consensus 352 g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~-------y~~~sGTSmAAP~VAGvaALLls~-~---P~ 420 (1013)
+.++.||++|+ ||||+|||.+|.++...+. |..++|||||||+|||++|||+++ + |.
T Consensus 232 ~~~~~~S~~g~------------~~di~ApG~~i~s~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~ 299 (340)
T 3lpc_A 232 GIRASFSNYGV------------DVDLAAPGQDILSTVDSGTRRPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKN 299 (340)
T ss_dssp SSBCTTCCBST------------TCCEEEECSSEEEEEESCSSSCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcCCCCCCCC------------CceEEecCCCeecccCCCCcCCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCC
Confidence 99999999995 7999999999999876543 889999999999999999999998 5 87
Q ss_pred CCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHH
Q 040133 421 NNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYEILK 466 (1013)
Q Consensus 421 ~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~Av~~l~ 466 (1013)
+++++||++|++||++........+|+|+||+.+|++.+.
T Consensus 300 ------lt~~~v~~~L~~tA~~~~~~~~~~~G~G~vd~~~Av~~~l 339 (340)
T 3lpc_A 300 ------LTPAELKDVLVSTTSPFNGRLDRALGSGIVDAEAAVNSVL 339 (340)
T ss_dssp ------CCHHHHHHHHHHTCBCCSSCCSSCCCSSBCCHHHHHHHHH
T ss_pred ------CCHHHHHHHHHhcCCcCCCCCCCCcccceecHHHHHHHHh
Confidence 9999999999999999876666689999999999998764
No 14
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.8e-50 Score=503.41 Aligned_cols=360 Identities=23% Similarity=0.353 Sum_probs=269.1
Q ss_pred cccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccccc--------------------------------ccccCCCCCC
Q 040133 181 SLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIK--------------------------------ERTNWTNEDT 228 (1013)
Q Consensus 181 ~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~--------------------------------~~~~~~~~~~ 228 (1013)
.+++++.+|+.+++|+||+|||||||||++||+|.... ..++|.....
T Consensus 2 d~i~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~~ 81 (926)
T 1xf1_A 2 DPSQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDGK 81 (926)
T ss_dssp CTTCCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCCSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCSC
T ss_pred CccccHHHHhccCCCCCcEEEEEecCCCCCCHhHcCCCCCcccccchhhhcccccccCcccccccCcccceeeccccCCC
Confidence 46899999999999999999999999999999998311 1123333333
Q ss_pred CCCCCCCcchhhhhhhccC-------CCcccccCCCeEEEEEEecCCCC-CchHHHHHHHHHHHhCCCeEEEecCCCCCC
Q 040133 229 LNDNLGHGTFVAGVVAGQD-------AECLGFAPDTEIYAFRVFTDAQV-SYTSWFLDAFNYAIATNIDVLNLSIGGPDY 300 (1013)
Q Consensus 229 ~~D~~gHGThVAGIIAg~~-------~~~~GVAP~A~I~~vrV~~~~g~-~~~s~il~Ai~~Ai~~gadVINlS~G~~~~ 300 (1013)
..|..||||||||||||+. ..+.||||+|+|+++|+++..+. +..+++++||+||+++|++|||||||+...
T Consensus 82 ~~D~~gHGThVAgiiAg~~~~~~~~~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~ 161 (926)
T 1xf1_A 82 TAVDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAINLGAKVINMSFGNAAL 161 (926)
T ss_dssp CCCSSTTTTHHHHSSCCCCCCCCSCSCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCEEEEECCSSCCC
T ss_pred CCCCCCcHHHHHHHHhCCCccCcccCCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHHhCCcEEEECCCCCCC
Confidence 3488999999999999875 14689999999999999987653 345789999999999999999999997532
Q ss_pred ----CChHHHHHHHHHhcCCeEEEEeccCCCC-------------CCCCCCCCCCCCCceEEeeeecC------------
Q 040133 301 ----LDLPFIEKIWEITANNIIMVSAIGNDGP-------------LYGTLNNPADQSDVIGVGGIDYN------------ 351 (1013)
Q Consensus 301 ----~~~~~~~ai~~a~~~GIivVaAAGN~G~-------------~~~~i~~PA~~~~VItVGAvd~~------------ 351 (1013)
....+..++..+.++|++||+||||+|. ...++.+|+.++++|+|||++.+
T Consensus 162 ~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~~~~~~~~~~ 241 (926)
T 1xf1_A 162 AYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVRVKTA 241 (926)
T ss_dssp TTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEEEEEEEEECT
T ss_pred CccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccccccccccceEEEcC
Confidence 3456778888899999999999999985 34568899999999999997521
Q ss_pred --------------------------------------------------------------------------------
Q 040133 352 -------------------------------------------------------------------------------- 351 (1013)
Q Consensus 352 -------------------------------------------------------------------------------- 351 (1013)
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~ 321 (926)
T 1xf1_A 242 DQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIE 321 (926)
T ss_dssp TSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEE
T ss_pred CCcceeeEEEecCCCCCCceEEEEECCCCCCccchhhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccc
Confidence
Q ss_pred ------------------------------------------CCccccCCCCCCccccCCCCCCCcceEEecCCceeeec
Q 040133 352 ------------------------------------------DHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSK 389 (1013)
Q Consensus 352 ------------------------------------------g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~ 389 (1013)
+.++.||||| |+.++++||||+|||++|++++
T Consensus 322 ~~~~~~iP~~~i~~~~g~~l~~~~~~ti~~~~~~~~~~~~~~~~~a~FSSrG------p~~~~~lKPDI~APG~~I~sa~ 395 (926)
T 1xf1_A 322 LPNVDQMPAAFISRKDGLLLKDNPQKTITFNATPKVLPTASGTKLSRFSSWG------LTADGNIKPDIAAPGQDILSSV 395 (926)
T ss_dssp CCCSTTCCEEEECHHHHHHHHHCSSCEEEECSSCEEEECSSCSBCCTTSCCC------BCTTSCBSCCEEEECCCEEESS
T ss_pred cCccccccEEEEeHHHHHHHHhCCceEEEecccceecccCCcceeccccCCC------CCCCCccCceEECCCCCEEeec
Confidence 2467899999 5668899999999999999999
Q ss_pred CCCCeeeeCCchhHHHHHHHHHHHHHH----hCCCCCcCCCCCHHH----HHHHHHhccccCCCC------CCCCccccc
Q 040133 390 ISTGCKSLSGTSVASPVVAGVVCLLVS----VIPENNRKNILNPAS----MKQALVEGAAKLSGP------NMYEQGAGR 455 (1013)
Q Consensus 390 ~~~~y~~~sGTSmAAP~VAGvaALLls----~~P~~~~~~~ltp~~----VK~~L~~TA~~~~~~------~~~~~G~G~ 455 (1013)
+++.|..++|||||||||||+||||+| .+|+ |+|++ ||++||+||.++... .++.+|+|+
T Consensus 396 ~~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~------~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~ 469 (926)
T 1xf1_A 396 ANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPD------MTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGA 469 (926)
T ss_dssp SCSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSS------SHHHHHHHHHHHHHHHHSBCCEEGGGTEECCHHHHTTCB
T ss_pred cCCcceecCccchhHHHHHHHHHHHHHHHhccCCC------CCHHHHHHHHHHHHHhcCCCcccCCCCccCChhccCCCc
Confidence 999999999999999999999999964 5888 99997 999999999987542 345789999
Q ss_pred cCHHHHHHHHHhcCCCccc-----CCcccccCCCCCCCCcccccccCCCc--cEEEEEEeecC-CCCCeeEEE------E
Q 040133 456 VDLLESYEILKNYQPRASI-----FPSVLDYTDCPYSWPFCRQPLYAGAM--PVIFNVTILNG-WEGNLLNIR------F 521 (1013)
Q Consensus 456 lna~~Av~~l~~~~p~~~~-----~p~~l~~~~~~~~~p~~~~~~~~g~~--pvt~n~ti~n~-~~g~~~~v~------~ 521 (1013)
||+.+|++. ...+ .+..++|++......+.....+.|.. ..++.+++... ..+..+++. .
T Consensus 470 vn~~~A~~~------~~~l~~~~~~~~~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~ 543 (926)
T 1xf1_A 470 VDAKKASAA------TMYVTDKDNTSSKVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYET 543 (926)
T ss_dssp CCHHHHHHC------SEEEEESSSSCSCEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCHHHhcCC------CeEEEcCCCCcceeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEec
Confidence 999999983 2111 11233333211111111222344442 33444444321 112222221 1
Q ss_pred EcceeeeecccEEEEEEEEcCCCc--c----c--eeeEEeEEEEE
Q 040133 522 TYSEVIWPWTGYLALHMQIKEEGA--K----F--SGEIEGNVSVS 558 (1013)
Q Consensus 522 s~s~v~~p~~G~~~v~vtv~~~~~--~----f--~g~~~G~v~~t 558 (1013)
+..++++|+++..+++|+++.... . + ...++|+|+|+
T Consensus 544 ~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~ 588 (926)
T 1xf1_A 544 SWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFK 588 (926)
T ss_dssp CCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEE
T ss_pred cCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEE
Confidence 235789999999999999986420 0 1 13578999887
No 15
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=5.7e-51 Score=459.01 Aligned_cols=278 Identities=20% Similarity=0.210 Sum_probs=238.4
Q ss_pred cccccCCccccccccccccccccccCchhhhhCCCCCC--CcEEEEEcCCCCCCCCCccc-ccccccCCCCC------CC
Q 040133 159 ATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGA--KVKMAIFDTGIRENHPHFRN-IKERTNWTNED------TL 229 (1013)
Q Consensus 159 ~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~--GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~~------~~ 229 (1013)
+.++....||+++. ++++++|+. ++|+ ||+||||||||+ +||+|.+ +....++..+. ..
T Consensus 16 ~~d~~~~~~W~l~~----------i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~~~~~~~~~~~~~~~~~~~~ 83 (347)
T 2iy9_A 16 SASARAEKPWYFDA----------IGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDSEFAKFSFTQDGSPFPVKKS 83 (347)
T ss_dssp -------CCHHHHH----------HTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTCEEEEEECBTTCCSSCCSSS
T ss_pred CCCcccccCcchhh----------CChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcCcccCCcccCCCCCCCCCCC
Confidence 34556778898875 578899999 8999 999999999999 9999995 44555565432 34
Q ss_pred CCCCCCcchhhhhhhccCCCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhC------CCeEEEecCCCCCC--C
Q 040133 230 NDNLGHGTFVAGVVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIAT------NIDVLNLSIGGPDY--L 301 (1013)
Q Consensus 230 ~D~~gHGThVAGIIAg~~~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~------gadVINlS~G~~~~--~ 301 (1013)
.|..||||||||||+|. .++.||||+|+|+++|++++.+.. ++++||+||+++ +++|||||||.... .
T Consensus 84 ~d~~gHGT~vAgiia~~-~g~~GvAp~a~l~~~~v~~~~~~~---~~~~ai~~a~~~~~~~~~~~~Vin~S~G~~~~~~~ 159 (347)
T 2iy9_A 84 EALYIHGTAMASLIASR-YGIYGVYPHALISSRRVIPDGVQD---SWIRAIESIMSNVFLAPGEEKIINISGGQKGVASA 159 (347)
T ss_dssp HHHHHHHHHHHHHHHCS-SSSCCSSTTCEEEEEECCSSBCTT---HHHHHHHHHHTCTTSCTTEEEEEEESSCBCCC-CC
T ss_pred CCCCCcHHHHHHHHhcc-cCCcccCCCCEEEEEEEecCCCHH---HHHHHHHHHHhhhhcccCCceEEEeccccCCCCCc
Confidence 56789999999999998 668999999999999999765432 899999999999 99999999997542 3
Q ss_pred ChHHHHHHHHHhcCCeEEEEeccCCCCCCC-----CCCCCCCCC----------CceEEeeeec--CCCcc-------cc
Q 040133 302 DLPFIEKIWEITANNIIMVSAIGNDGPLYG-----TLNNPADQS----------DVIGVGGIDY--NDHIA-------SF 357 (1013)
Q Consensus 302 ~~~~~~ai~~a~~~GIivVaAAGN~G~~~~-----~i~~PA~~~----------~VItVGAvd~--~g~~a-------~f 357 (1013)
...+.+++.++.++|+++|+||||+|.+.. ...+|+..+ ++|+|||++. ++.++ .|
T Consensus 160 ~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~g~~~~~~~~~~~f 239 (347)
T 2iy9_A 160 SVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGETPVLHGGGITG 239 (347)
T ss_dssp HHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCTTSCCCBCCCSSSC
T ss_pred CHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCCCceecccCCCCCC
Confidence 456778889999999999999999998543 678999999 9999999999 99999 99
Q ss_pred CCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHH
Q 040133 358 SSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALV 437 (1013)
Q Consensus 358 Ss~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~ 437 (1013)
|++|++ ||||+|||.+|+++.++++|..++|||||||+|||++|||++++|+ +++++||++|+
T Consensus 240 S~~G~~-----------~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG~aAll~~~~p~------lt~~~v~~~L~ 302 (347)
T 2iy9_A 240 SRFGNN-----------WVDIAAPGQNITFLRPDAKTGTGSGTSEATAIVSGVLAAMTSCNPR------ATATELKRTLL 302 (347)
T ss_dssp BCBCTT-----------TCSEEEECSSEEEECTTSCEEEECSHHHHHHHHHHHHHHHHHHCTT------SCHHHHHHHHH
T ss_pred CCCCCC-----------CCEEEeCCCCeEeecCCCCeEeccchHHHHHHHHHHHHHHHHhCCC------CCHHHHHHHHH
Confidence 999952 7999999999999999999999999999999999999999999999 99999999999
Q ss_pred hccccCCCCCCCCccccccCHHHHHHHHHhcC
Q 040133 438 EGAAKLSGPNMYEQGAGRVDLLESYEILKNYQ 469 (1013)
Q Consensus 438 ~TA~~~~~~~~~~~G~G~lna~~Av~~l~~~~ 469 (1013)
+||++........+|+|+||+.+|++.+.++.
T Consensus 303 ~tA~~~~~~~~~~~G~G~ld~~~A~~~~~~~~ 334 (347)
T 2iy9_A 303 ESADKYPSLVDKVTEGRVLNAEKAISMFCKKN 334 (347)
T ss_dssp HHSEECGGGTTTSGGGEECCHHHHHHHHHC--
T ss_pred HhCccCCCCCCccccCCEecHHHHHHHHHhcC
Confidence 99999877666789999999999999988755
No 16
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1e-50 Score=452.79 Aligned_cols=272 Identities=30% Similarity=0.456 Sum_probs=239.3
Q ss_pred cccCCccccccccccccccccccCchhhhhCCCCCC--CcEEEEEcCCCCCCCCCccc-ccccccCCCCC------CCCC
Q 040133 161 TSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGA--KVKMAIFDTGIRENHPHFRN-IKERTNWTNED------TLND 231 (1013)
Q Consensus 161 ~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~--GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~~------~~~D 231 (1013)
++....||+++. |+++++|+.+ +|+ ||+||||||||+.+||+|.+ +....++.... ...|
T Consensus 3 dp~~~~~W~l~~----------i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d 71 (320)
T 2z30_A 3 QPAQTIPWGIER----------VKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAANIAWCVSTLRGKVSTKLRDCAD 71 (320)
T ss_dssp CCBCCCCHHHHH----------TTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGGEEEEEECGGGCCBCCHHHHBC
T ss_pred CCCcCCCCChhh----------cChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcccccCccccCCccCCCCCCCCC
Confidence 445677899875 5889999998 999 99999999999999999985 34444554332 2357
Q ss_pred CCCCcchhhhhhhccCCC--cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhC--------------------CCe
Q 040133 232 NLGHGTFVAGVVAGQDAE--CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIAT--------------------NID 289 (1013)
Q Consensus 232 ~~gHGThVAGIIAg~~~~--~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~--------------------gad 289 (1013)
..||||||||||+|..++ +.||||+|+|+++|+++..+.+..+++++||+||+++ +++
T Consensus 72 ~~gHGT~vAgiia~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (320)
T 2z30_A 72 QNGHGTHVIGTIAALNNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAE 151 (320)
T ss_dssp SSSHHHHHHHHHHCCSSSBSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCS
T ss_pred CCCCHHHHHHHHHcccCCCceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCcccccccccccccccccccCCce
Confidence 889999999999997543 6899999999999999887777889999999999987 999
Q ss_pred EEEecCCCCCCCChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCC
Q 040133 290 VLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPH 369 (1013)
Q Consensus 290 VINlS~G~~~~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~ 369 (1013)
|||||||.... ...+.+++.++.++|+++|+||||+|.. ...+|+.++++|+|||++.++.++.||++|
T Consensus 152 Vin~S~G~~~~-~~~~~~ai~~a~~~gi~vV~AAGN~g~~--~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g-------- 220 (320)
T 2z30_A 152 VISMSLGGPAD-DSYLYDMIIQAYNAGIVIVAASGNEGAP--SPSYPAAYPEVIAVGAIDSNDNIASFSNRQ-------- 220 (320)
T ss_dssp EEEECEEBSCC-CHHHHHHHHHHHHTTCEEEEECCSSCCS--SCCBTTTSTTEEEEEEECTTSCBCTTSCSS--------
T ss_pred EEEecCCCCCC-CHHHHHHHHHHHHCCCEEEEeCCCCCCC--CCCCcccCCCeEEEEeeCCCCCcCcccCCC--------
Confidence 99999998754 4567888999999999999999999974 567999999999999999999999999998
Q ss_pred CCCCCcceEEecCCceeeecCCCCeeeeCCchhHHHHHHHHHHHHHHhC-------------CCCCcCCCCCHHHHHHHH
Q 040133 370 GYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVI-------------PENNRKNILNPASMKQAL 436 (1013)
Q Consensus 370 ~~G~~KpDI~APG~~I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~~-------------P~~~~~~~ltp~~VK~~L 436 (1013)
|+|+|||.+|+++.+++.|..++|||||||+|||++|||++++ |. +++.+||++|
T Consensus 221 ------~~v~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~------lt~~~v~~~L 288 (320)
T 2z30_A 221 ------PEVSAPGVDILSTYPDDSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDD------ISKNTVRGIL 288 (320)
T ss_dssp ------CSEEEECSSEEEEETTTEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTC------CSTTSHHHHH
T ss_pred ------CCEEeCCCCeEEeccCCCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCC------CCHHHHHHHH
Confidence 5789999999999999999999999999999999999999998 77 9999999999
Q ss_pred HhccccCCCCC-CCCccccccCHHHHHHHHH
Q 040133 437 VEGAAKLSGPN-MYEQGAGRVDLLESYEILK 466 (1013)
Q Consensus 437 ~~TA~~~~~~~-~~~~G~G~lna~~Av~~l~ 466 (1013)
++||+++.... ...+|||+||+.+|++.++
T Consensus 289 ~~ta~~~~~~g~~~~~G~G~vd~~~A~~~a~ 319 (320)
T 2z30_A 289 HITADDLGPTGWDADYGYGVVRAALAVQAAL 319 (320)
T ss_dssp HHHSBCCSSSSSBTTTBTCBCCHHHHHHHHH
T ss_pred HhhCccCCCCCCCCCcCCceeCHHHHHHHHh
Confidence 99999886543 3468999999999999765
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=5.9e-50 Score=443.94 Aligned_cols=278 Identities=24% Similarity=0.411 Sum_probs=239.0
Q ss_pred CCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCC-----CCCCCCCCCcc
Q 040133 164 CTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNE-----DTLNDNLGHGT 237 (1013)
Q Consensus 164 ~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~-----~~~~D~~gHGT 237 (1013)
...+|+++. |+++++|+.+++|+||+||||||||+.+||+|.+ +....+|... ....|..||||
T Consensus 4 ~~~~W~l~~----------i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~~~~~~~~~~~~~~~~~~~~d~~gHGT 73 (310)
T 2ixt_A 4 QQIPWGIKA----------IYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNVEQCKDFTGATTPINNSCTDRNGHGT 73 (310)
T ss_dssp CSSCHHHHH----------HHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTTEEEEEESSSSSSCEETCCCCSSSHHH
T ss_pred ccCCCchhh----------cCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhcccccccccCCCCCCCCCCCCCCCCHH
Confidence 456898876 4778999999999999999999999999999985 3445566543 23467899999
Q ss_pred hhhhhhhccC----CCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCC-----eEEEecCCCCCCCChHHHHH
Q 040133 238 FVAGVVAGQD----AECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNI-----DVLNLSIGGPDYLDLPFIEK 308 (1013)
Q Consensus 238 hVAGIIAg~~----~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~ga-----dVINlS~G~~~~~~~~~~~a 308 (1013)
||||||+|.. .++.||||+|+|+.+|++.+.+.+..+++++||+|++++++ +|||||||.... ...+.++
T Consensus 74 ~vAgiia~~~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~S~G~~~~-~~~~~~a 152 (310)
T 2ixt_A 74 HVAGTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSAN-NSLISSA 152 (310)
T ss_dssp HHHHHHHCBCCTTSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEECCCBSSC-CHHHHHH
T ss_pred HHHHHHhccCCCCCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEEEEcCCCCCC-CHHHHHH
Confidence 9999999874 23689999999999999988777788999999999999887 999999998754 4567888
Q ss_pred HHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeee---cCC--CccccCCCCCCccccCCCCCCCcceEEecCC
Q 040133 309 IWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGID---YND--HIASFSSRGMSTWEIPHGYGRVKPDVVAYGR 383 (1013)
Q Consensus 309 i~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd---~~g--~~a~fSs~G~st~~~P~~~G~~KpDI~APG~ 383 (1013)
+.++.++|+++|+||||+|.....+.+|+..+++|+|||++ .++ .++.||++|+.........++.||||+|||.
T Consensus 153 i~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~ 232 (310)
T 2ixt_A 153 VNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGS 232 (310)
T ss_dssp HHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECS
T ss_pred HHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccccCCCeeeccccCCCCccCCccccccCCCeeEECCCC
Confidence 99999999999999999998766788999999999999999 677 8999999996432212223456999999999
Q ss_pred ceeeecCCCCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCC--------CCCCccccc
Q 040133 384 EIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGP--------NMYEQGAGR 455 (1013)
Q Consensus 384 ~I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~--------~~~~~G~G~ 455 (1013)
+|+++..+++|..++|||||||+|||++|||++++|+ |++++||++|++||++.... ....+|||+
T Consensus 233 ~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~------lt~~~v~~~L~~tA~~~~~~~~~~a~~g~d~~~G~G~ 306 (310)
T 2ixt_A 233 SVYSTWYNGGYNTISGTSMATPHVSGLAAKIWAENPS------LSNTQLRSNLQERAKSVDIKGGYGAAIGDDYASGFGF 306 (310)
T ss_dssp SEEEECTTSSEEEECSHHHHHHHHHHHHHHHHHHSTT------CCHHHHHHHHHHHHHTSCCCBSTTCCSSSBTTTBTCB
T ss_pred CEeeecCCCCEEeeccHHHHHHHHHHHHHHHHHhCCC------CCHHHHHHHHHhhCcccCCCCCcccccCCccccccce
Confidence 9999999999999999999999999999999999999 99999999999999987532 234689999
Q ss_pred cCH
Q 040133 456 VDL 458 (1013)
Q Consensus 456 lna 458 (1013)
+|+
T Consensus 307 ~~v 309 (310)
T 2ixt_A 307 ARV 309 (310)
T ss_dssp CCC
T ss_pred eec
Confidence 985
No 18
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.1e-52 Score=502.40 Aligned_cols=328 Identities=23% Similarity=0.266 Sum_probs=48.3
Q ss_pred CcccCCcEEEEeCCCCChHHHHHHHHhhc---CCCCCchhhccCCCccccceeeeEEecccccHHHHHHHHcCCCceEEE
Q 040133 45 TRISRNNYIVRFREYKTAEDHCSYLKSRI---TPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVS 121 (1013)
Q Consensus 45 ~~~v~~~yIV~fk~~~~~~~~~~~l~~~~---~~~~~~~v~r~~~~~~~~~~f~v~~v~~~~~~~~i~~L~~~P~V~~Ve 121 (1013)
...+|++|||+||++.+.++.+..++... .+.+.. ......|...|..+ ....+++.+++|+++|+|++||
T Consensus 71 ~~~ipg~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g~~----~~v~~~y~~~~~Gf--sv~l~~~~l~~L~~~P~V~~Ve 144 (692)
T 2p4e_P 71 PWRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYL----TKILHVFHGLLPGF--LVKMSGDLLELALKLPHVDYIE 144 (692)
T ss_dssp GGEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCC----CEEEEEECSSSCEE--EEECCGGGHHHHHTSTTEEEEE
T ss_pred cccCCCcEEEEECCCCCHHHHHHHHHHHHHHHhhcccc----cceeeEeeccccEE--EEEeCHHHHHHHHcCCCceEEE
Confidence 45688999999999988766554433321 111100 00011233333333 3345567899999999999999
Q ss_pred eCceeeecccCCcccCCCCCCCccccccccccCcccccccccCCccccccccccccccccccCchhhhhCCCCCCCcEEE
Q 040133 122 VDSSYKRGLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMA 201 (1013)
Q Consensus 122 pd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~Va 201 (1013)
||+.++.. ..+|++..+.+... ....|..+.+|+||+||
T Consensus 145 pd~~v~~~-----------------------------------~~pWgL~~i~~~~~------~~~~w~~~~~G~GV~Va 183 (692)
T 2p4e_P 145 EDSSVFAQ-----------------------------------SIPWNLERITPPRY------RADEYQPPDGGSLVEVY 183 (692)
T ss_dssp EEEEEEEC------------------------------------------------------------------------
T ss_pred eccccccC-----------------------------------CCCcchhhcccccc------cccccccCCCCCCcEEE
Confidence 99887431 13478776644321 12478888999999999
Q ss_pred EEcCCCCCCCCCcccccccccCCC---C------CCCCCCCCCcchhhhhhhccCCCcccccCCCeEEEEEEecCCCCCc
Q 040133 202 IFDTGIRENHPHFRNIKERTNWTN---E------DTLNDNLGHGTFVAGVVAGQDAECLGFAPDTEIYAFRVFTDAQVSY 272 (1013)
Q Consensus 202 VIDTGId~~Hpdl~~i~~~~~~~~---~------~~~~D~~gHGThVAGIIAg~~~~~~GVAP~A~I~~vrV~~~~g~~~ 272 (1013)
||||||+.+||+|.+.....+|.. . ....|.+||||||||||+|.. .||||+|+|+++||++..+.++
T Consensus 184 VIDTGId~~HpdL~gr~~~~~~~~~~d~dg~~~~~~~~D~~GHGTHVAGiIAg~~---~GVAP~A~L~~vKVl~~~G~g~ 260 (692)
T 2p4e_P 184 LLDTSIQSDHREIEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAGVVSGRD---AGVAKGASMRSLRVLNCQGKGT 260 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCCCCChhhcCceEecccccccCCCCCcccCCCCCCCCcHHHhhhHhhcCC---CccCCCCEEEEEEeecCCCCCC
Confidence 999999999999996432222221 1 134578899999999999875 8999999999999998887788
Q ss_pred hHHHHHHHHHHHhC------CCeEEEecCCCCCCCChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEe
Q 040133 273 TSWFLDAFNYAIAT------NIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVG 346 (1013)
Q Consensus 273 ~s~il~Ai~~Ai~~------gadVINlS~G~~~~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVG 346 (1013)
.+++++||+|++++ +++|||||||+.. ...+.+++.++.++|+++|+||||+|.+. ...+|+.++++|+||
T Consensus 261 ~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~--s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~-~~~sPA~~~~vItVG 337 (692)
T 2p4e_P 261 VSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY--SRVLNAACQRLARAGVVLVTAAGNFRDDA-CLYSPASAPEVITVG 337 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhhhhcccCCceEEEecCCCCC--cHHHHHHHHHHHHCCCEEEEECCCCCCCC-CccCcccCCCEEEEE
Confidence 89999999999985 8999999999753 34577888889999999999999999753 356799999999999
Q ss_pred eeecCCCccc----cCCCCCCccccCCCCCCCcceEEecCCceeeecCC--CCeeeeCCchhHHHHHHHHHHHHHHhCCC
Q 040133 347 GIDYNDHIAS----FSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIS--TGCKSLSGTSVASPVVAGVVCLLVSVIPE 420 (1013)
Q Consensus 347 Avd~~g~~a~----fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~--~~y~~~sGTSmAAP~VAGvaALLls~~P~ 420 (1013)
|++.++.++. |||+|+ +|||+|||.+|++++++ +.|..++|||||||||||++|||++++|+
T Consensus 338 A~d~~~~~a~~ss~fSn~G~------------~vDI~APG~~I~St~~~~~~~y~~~SGTSmAAPhVAG~aALlls~~P~ 405 (692)
T 2p4e_P 338 ATNAQDQPVTLGTLGTNFGR------------CVDLFAPGEDIIGASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEPE 405 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCCccccccccCCCCC------------ceeEEecCCcEEeeccCCCCceEeccchHHHHHHHHHHHHHHHHHCCC
Confidence 9999999988 888885 79999999999999876 56899999999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHhccccC
Q 040133 421 NNRKNILNPASMKQALVEGAAKL 443 (1013)
Q Consensus 421 ~~~~~~ltp~~VK~~L~~TA~~~ 443 (1013)
|+|++||++|++||.+.
T Consensus 406 ------ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 406 ------LTLAELRQRLIHFSAKD 422 (692)
T ss_dssp -----------------------
T ss_pred ------CCHHHHHHHHHHhcccc
Confidence 99999999999999764
No 19
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=7.5e-49 Score=459.31 Aligned_cols=390 Identities=17% Similarity=0.200 Sum_probs=282.7
Q ss_pred cccccCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccccc-c--cccCCCCC-------C
Q 040133 159 ATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIK-E--RTNWTNED-------T 228 (1013)
Q Consensus 159 ~~~~~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~-~--~~~~~~~~-------~ 228 (1013)
|.++....||+++.. ....|+++++|+.+++|+||+||||||||+.+||+|.+.. . .+++...+ .
T Consensus 6 p~Dp~~~~qW~l~~~-----~~~~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~p~~~~~ 80 (471)
T 1p8j_A 6 PTDPKFPQQWYLSGV-----TQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYT 80 (471)
T ss_dssp CCCTTGGGCTTTSCT-----TSCSCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCGGGCEETTTTBSCCCCCCC
T ss_pred CCCcChhhCcCCCCC-----CccCCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCccCcccccCCCCCCCCccC
Confidence 456667789998864 2346899999999999999999999999999999999643 2 34554322 2
Q ss_pred CCCCCCCcchhhhhhhccCCC---cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHh-CCCeEEEecCCCCCC----
Q 040133 229 LNDNLGHGTFVAGVVAGQDAE---CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIA-TNIDVLNLSIGGPDY---- 300 (1013)
Q Consensus 229 ~~D~~gHGThVAGIIAg~~~~---~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~-~gadVINlS~G~~~~---- 300 (1013)
..|..+|||||||+|||..++ +.||||+|+|+++|+++ +..+++++|++|+++ ++++|||||||....
T Consensus 81 ~~d~~gHGT~vAGiiaa~~~n~~g~~GvAp~a~i~~~rv~~----g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~~~ 156 (471)
T 1p8j_A 81 QMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLD----GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTV 156 (471)
T ss_dssp TTCTTCHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECSS----SCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCC
T ss_pred CCCCCCcHHHHHHHHHeeccCCCCCEEECCCCeEEEEEccC----CchhHHHHHHHhhhccCCCeEEEeccCcCCCCCcc
Confidence 357789999999999996543 68999999999999985 235679999999999 999999999997532
Q ss_pred --CChHHHHHHHHHhc-----CCeEEEEeccCCCCCCCC--CCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCC
Q 040133 301 --LDLPFIEKIWEITA-----NNIIMVSAIGNDGPLYGT--LNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGY 371 (1013)
Q Consensus 301 --~~~~~~~ai~~a~~-----~GIivVaAAGN~G~~~~~--i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~ 371 (1013)
....+.+++.++.+ +|+++|+||||+|..... ...|+..+++|+|||++.++.++.||++|++.+.
T Consensus 157 ~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~g~~a~~S~~g~~~~~----- 231 (471)
T 1p8j_A 157 DGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLA----- 231 (471)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTTSCCCTTCCBCTTCCE-----
T ss_pred cCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCCCCcccccCCCCcceE-----
Confidence 23345566666654 699999999999975332 3345566999999999999999999999964321
Q ss_pred CCCcceEEecCCceeeecCC-CCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCC---
Q 040133 372 GRVKPDVVAYGREIMGSKIS-TGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPN--- 447 (1013)
Q Consensus 372 G~~KpDI~APG~~I~St~~~-~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~--- 447 (1013)
..+|+..+||.+|+++... ++|..++|||||||+|||++|||+|++|+ |++++||++|++||+++....
T Consensus 232 -~~~~~~~~~g~~i~st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~------lt~~~v~~~L~~tA~~~~~~~~~~ 304 (471)
T 1p8j_A 232 -TTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKN------LTWRDMQHLVVQTSKPAHLNADDW 304 (471)
T ss_dssp -EEECCCSTTSCCEEEEETTTEEEEEECSHHHHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHHCBCTTCCCSCC
T ss_pred -EeCCCCCCCCCCEEEeeCCCCccccCCCcccccchhhhHHHHHHhhCCC------CCHHHHHHHHHhcCccCCCCCCCc
Confidence 1122223345689998875 45889999999999999999999999999 999999999999999876431
Q ss_pred ---------CCCccccccCHHHHHHHHHhcCCCcccCCcccccCCCCCCCCcccccccCCCccEEEEEEeecCC-----C
Q 040133 448 ---------MYEQGAGRVDLLESYEILKNYQPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPVIFNVTILNGW-----E 513 (1013)
Q Consensus 448 ---------~~~~G~G~lna~~Av~~l~~~~p~~~~~p~~l~~~~~~~~~p~~~~~~~~g~~pvt~n~ti~n~~-----~ 513 (1013)
...+|||+||+.+|++.++++++... .. .+.. .+....+.+ ...+++++++..-. -
T Consensus 305 ~~n~~g~~~~~~~G~G~vda~~Av~~a~~~~~~~~---~~-~~~~---~~~~~~~~i---~~~~~~~~~~~~~~~~~~~~ 374 (471)
T 1p8j_A 305 ATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAP---QR-KCIV---EILVEPKDI---GKRLEVRKAVTACLGEPNHI 374 (471)
T ss_dssp EECTTSCEEBTTTBTCBCCHHHHHHHHHTCCCCCC---CE-EEEE---EEECSCEEC---TTEEEEEEEECCSTTSTTCC
T ss_pred eecCCCcccCCCCCCEEEcHhHHHHHhhccccCCc---ce-EEEe---eccccceec---CceEEEEEeeccccccccce
Confidence 24689999999999999998875322 11 0000 000000111 23444454443211 1
Q ss_pred CCeeEEEEEcceeeeecccEEEEEEEEcCCC-------ccceeeEEeEEEEEEEcCCCCCCCCCcceeEEEEEEEE
Q 040133 514 GNLLNIRFTYSEVIWPWTGYLALHMQIKEEG-------AKFSGEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLK 582 (1013)
Q Consensus 514 g~~~~v~~s~s~v~~p~~G~~~v~vtv~~~~-------~~f~g~~~G~v~~tv~s~~~~~~~~~~~~~~~~~v~v~ 582 (1013)
....+|.++.. +.++..|.+.|+++.+... +..+....|...+++++...++|. -..+|+|.|+..
T Consensus 375 ~~~e~v~v~~~-i~h~~~gdL~i~L~SP~Gt~s~l~~~~~~d~~~~g~~~~~f~s~~~~gE~--~~G~W~l~V~d~ 447 (471)
T 1p8j_A 375 TRLEHVQARLT-LSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDED--PAGEWVLEIENT 447 (471)
T ss_dssp SEEEEEEEEEE-EEESCGGGEEEEEECTTCCEEEEECCCTTCCCSCCEEEEEEEECTTTTCC--CCEEEEEEEEEC
T ss_pred eEEEeEEEEEE-EecCCCCcEEEEEECCCCCEEEEeCCCCCCcccCCccccEEeeeeeeCCC--CCccEEEEEEEC
Confidence 12334555444 6788999999988755433 121222356677888888888764 357788887765
No 20
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=4.8e-49 Score=475.05 Aligned_cols=264 Identities=25% Similarity=0.384 Sum_probs=215.0
Q ss_pred hhhhCCCCCCCcEEEEEcCCCCCCCCCcccc-------------------------cccccCC--------CCCCCCCCC
Q 040133 187 ALWGKGYTGAKVKMAIFDTGIRENHPHFRNI-------------------------KERTNWT--------NEDTLNDNL 233 (1013)
Q Consensus 187 ~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i-------------------------~~~~~~~--------~~~~~~D~~ 233 (1013)
.+|.++.+|+||+|||||||||++||+|++- ...++|. ....+.|.+
T Consensus 13 ~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~~~~~~~~p~D~~ 92 (621)
T 3vta_A 13 TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPISPGDVNGPRDTN 92 (621)
T ss_dssp TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSCCTTCCSSSBCSS
T ss_pred cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCccCCCCCCCCCCCC
Confidence 3577778999999999999999999999741 0011111 112355789
Q ss_pred CCcchhhhhhhccCCC-----------cccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCCeEEEecCCCCCC--
Q 040133 234 GHGTFVAGVVAGQDAE-----------CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDY-- 300 (1013)
Q Consensus 234 gHGThVAGIIAg~~~~-----------~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~gadVINlS~G~~~~-- 300 (1013)
||||||||||||+..+ ..||||+|+|+++|++++.+ +..+++++||++|+++|++|||+|||+...
T Consensus 93 GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~di~~a~~~a~~~g~dVin~SlG~~~~~~ 171 (621)
T 3vta_A 93 GHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG-CSDTDILAAYDDAIADGVDIISLSVGGANPRH 171 (621)
T ss_dssp SHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE-ECHHHHHHHHHHHHHHTCSEEEECCCCCCGGG
T ss_pred cCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCC-CCHHHHHHHHHHHHHhCCCEEEecCCCCCCCC
Confidence 9999999999997421 47999999999999998875 678899999999999999999999997642
Q ss_pred -CChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecC----------------------------
Q 040133 301 -LDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYN---------------------------- 351 (1013)
Q Consensus 301 -~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~---------------------------- 351 (1013)
...++..++..+.++|+++|+||||+|+...++ ++..+++++|++...+
T Consensus 172 ~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~--~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (621)
T 3vta_A 172 YFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTT--ASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFDNQYY 249 (621)
T ss_dssp GGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCC--CCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBCCCCSCCEEE
T ss_pred cCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCccc--CCCCCCceeEEEeeccccceeeEEeccCceeeeeecccCCCccc
Confidence 234567788889999999999999999865554 4556777777764211
Q ss_pred --------------------------------------------------------------------------------
Q 040133 352 -------------------------------------------------------------------------------- 351 (1013)
Q Consensus 352 -------------------------------------------------------------------------------- 351 (1013)
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~~~~~~~lP~~~v~~~ 329 (621)
T 3vta_A 250 PLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDYADSYPLPSSVLDPN 329 (621)
T ss_dssp CEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCSSCCCCSSSEEEECHH
T ss_pred ccccccccccccccccccccccccccccccccceEEEEecCCChhHHhhhhcceeEEEEEecCCCcccccccceEEECHH
Confidence
Q ss_pred ------------------------------CCccccCCCCCCccccCCCCCCCcceEEecCCceeeecC----------C
Q 040133 352 ------------------------------DHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKI----------S 391 (1013)
Q Consensus 352 ------------------------------g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~----------~ 391 (1013)
+.++.|||||++ +..++++||||+|||.+|+++++ .
T Consensus 330 ~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~----~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~ 405 (621)
T 3vta_A 330 DLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPN----RATKDVIKPDISGPGVEILAAWPSVAPVGGIRRN 405 (621)
T ss_dssp HHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSC----TTCTTSCSCCEEEECSSEEEECCSSSCBTTBCCC
T ss_pred HHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCC----CCCCCeeccccccCCcceEeecCccccccCcCCC
Confidence 235789999964 33578899999999999999975 3
Q ss_pred CCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCC----CCCCccccccCHHHHHH
Q 040133 392 TGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGP----NMYEQGAGRVDLLESYE 463 (1013)
Q Consensus 392 ~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~----~~~~~G~G~lna~~Av~ 463 (1013)
..|..++|||||||||||++|||+|++|+ |+|++||++||+||.++... .++.+|+|+||+.+|++
T Consensus 406 ~~y~~~SGTSMAaPhVAGvaALl~q~~P~------~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~~~A~~ 475 (621)
T 3vta_A 406 TLFNIISGTSMSCPHITGIATYVKTYNPT------WSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLKAVR 475 (621)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCHHHHSC
T ss_pred CcceEecCccccchhhhhHHHHHHHHCCC------CCHHHHHHHHHhcCCcccccCCCCCchhcCCCccCHHHhcC
Confidence 46999999999999999999999999999 99999999999999987542 34678999999999986
No 21
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.7e-48 Score=468.86 Aligned_cols=393 Identities=20% Similarity=0.257 Sum_probs=283.5
Q ss_pred ccccccCCccccccccccc------cccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccccc--cccCCCCC--
Q 040133 158 TATTSNCTINWRRHLLMQR------SQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKE--RTNWTNED-- 227 (1013)
Q Consensus 158 ~~~~~~~~~~W~l~~~~~~------~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~~--~~~~~~~~-- 227 (1013)
.+.++....||++++..+. .....+|++..+|+.+++|+||+||||||||+++||+|++... ..++....
T Consensus 26 ~~~Dp~~~~qW~l~~~~~~~~~~~~~~~~~din~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~d 105 (600)
T 2oxa_A 26 PGANPLQDQQWYLLNSGQDGFSARGGIAGNDLNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNVRPGSKNVVTGSDD 105 (600)
T ss_dssp CCCCTTGGGCTTTSCSSCCTTSSSCCCTTCSCCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGBCSCCBCTTTCSSC
T ss_pred CCCCCChhhccCccCCCcccccccCCCCccCcChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhccccCceeccCCCCC
Confidence 3577888899999987542 2234679999999999999999999999999999999985332 24444332
Q ss_pred -C-CCCCCCCcchhhhhhhccCCC--cccccCCCeEEEEEEecCCCCCc-hHHHHHHHHHHHhCCCeEEEecCCCCCCC-
Q 040133 228 -T-LNDNLGHGTFVAGVVAGQDAE--CLGFAPDTEIYAFRVFTDAQVSY-TSWFLDAFNYAIATNIDVLNLSIGGPDYL- 301 (1013)
Q Consensus 228 -~-~~D~~gHGThVAGIIAg~~~~--~~GVAP~A~I~~vrV~~~~g~~~-~s~il~Ai~~Ai~~gadVINlS~G~~~~~- 301 (1013)
. .++.+||||||||+|||..++ +.||||+|+|+++|+++..+... ..+++++...+..++++|||||||.....
T Consensus 106 ~~p~d~~~gHGT~vAGiiaa~~n~~g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~~~~~ 185 (600)
T 2oxa_A 106 PTPTDPDTGHGTSVSGIIAAVDNAIGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVDP 185 (600)
T ss_dssp CCCCSTTCCHHHHHHHHHHCCSSSSSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECCCCCCSSC
T ss_pred CCCCCCCCCCccHHHHHhhcccCCCcceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEeccCCCCCc
Confidence 1 334689999999999998433 79999999999999998765442 34555554457778999999999976421
Q ss_pred ---C---hHHHHHHHH---HhcCCeEEEEeccCCCCCC--------------------CCCCCCCCCCCceEEeeeecCC
Q 040133 302 ---D---LPFIEKIWE---ITANNIIMVSAIGNDGPLY--------------------GTLNNPADQSDVIGVGGIDYND 352 (1013)
Q Consensus 302 ---~---~~~~~ai~~---a~~~GIivVaAAGN~G~~~--------------------~~i~~PA~~~~VItVGAvd~~g 352 (1013)
+ ..+.+++.+ +.++|++||+||||+|... +.+..|+..+++|+|||++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~~~~g 265 (600)
T 2oxa_A 186 RSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSALNADG 265 (600)
T ss_dssp CCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEECTTS
T ss_pred cccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecccCCC
Confidence 1 233343333 4568999999999998631 1123344556699999999999
Q ss_pred CccccCCCCCCccccCCCCCCCcceEEecCCcee-------eecCC---------------------------CCeeeeC
Q 040133 353 HIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIM-------GSKIS---------------------------TGCKSLS 398 (1013)
Q Consensus 353 ~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~-------St~~~---------------------------~~y~~~s 398 (1013)
.++.||++|+ .+||+|||++|. ++... +.|..++
T Consensus 266 ~~a~fS~~G~------------~vdv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~s 333 (600)
T 2oxa_A 266 VRSSYSSVGS------------NIFLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMN 333 (600)
T ss_dssp SBCTTCCBCT------------TEEEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEEC
T ss_pred CcCCcCCCCC------------CeEEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccc
Confidence 9999999996 479999999853 33221 1278899
Q ss_pred CchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCC-------------------------------
Q 040133 399 GTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPN------------------------------- 447 (1013)
Q Consensus 399 GTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~------------------------------- 447 (1013)
|||||||||||+||||++++|+ |++++||++|++||+++....
T Consensus 334 GTS~AaP~VAGvaALl~s~~P~------lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~ 407 (600)
T 2oxa_A 334 GTSSATPSTSGAMALLMSAYPD------LSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMW 407 (600)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTT------SCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCE
T ss_pred cchHHhHHHHHHHHHHHHhCCC------CCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCcc
Confidence 9999999999999999999999 999999999999999875432
Q ss_pred -CCCccccccCHHHHHHHHHhcCCCcccCCcccccCCCCCCCCccc-----cccc-CCCccEEEEEEeecCCCCCeeEEE
Q 040133 448 -MYEQGAGRVDLLESYEILKNYQPRASIFPSVLDYTDCPYSWPFCR-----QPLY-AGAMPVIFNVTILNGWEGNLLNIR 520 (1013)
Q Consensus 448 -~~~~G~G~lna~~Av~~l~~~~p~~~~~p~~l~~~~~~~~~p~~~-----~~~~-~g~~pvt~n~ti~n~~~g~~~~v~ 520 (1013)
...||||+||+.+|+++++++++.. |... |+ |.... ..+. .+...++.++++...+ ...+|.
T Consensus 408 ~~~~~G~G~vda~~Av~~A~~~~~~~---~~~~----~~--~~~~~~~~~~~~ip~~~~~~~~~~~~v~~~~--~lE~V~ 476 (600)
T 2oxa_A 408 FSPTYGFGLIDVNKALELAANHQPLP---PLVQ----LP--WQKINVTGSAAAIADVGNSPTSSTTRIATPL--TVEAVQ 476 (600)
T ss_dssp EBTTTBTCBCCHHHHHHHHTTCCCCC---CCEE----CC--CEEEECCGGGGEECTBCSSCEEEEEEECSCC--BEEEEE
T ss_pred ccccCCCchhhHHHHHHHHHhcccCC---Ccee----ec--eeeecccccccccccCCccceeeeEEecccc--eEEEEE
Confidence 1457999999999999999887432 2111 11 11000 1111 2334556666665433 344555
Q ss_pred EEcceeeeecccEEEEEEEEcCCCcc-------------cee------eEEeEEEEEEEcCCCCCCCCCcceeEEEEEEE
Q 040133 521 FTYSEVIWPWTGYLALHMQIKEEGAK-------------FSG------EIEGNVSVSVHSPPARGEKSSRRCTCMLQLKL 581 (1013)
Q Consensus 521 ~s~s~v~~p~~G~~~v~vtv~~~~~~-------------f~g------~~~G~v~~tv~s~~~~~~~~~~~~~~~~~v~v 581 (1013)
++.+ +.++..|.+.|.++.+..... ++. ...|...+++++...++|+ -..+|+|.|+.
T Consensus 477 v~v~-i~h~~rgdL~i~L~SP~Gt~s~L~~~r~~~~~~~~d~~s~~~~~~~g~~~w~f~s~~~wgE~--~~G~WtL~V~D 553 (600)
T 2oxa_A 477 VMVS-LDHQRLPDLLIELVSPAGTRSILLSPFNSLVGQSLDQQQLGFVRTKGLRDMRMLSNKFYGES--AQGTWRLEVTD 553 (600)
T ss_dssp EEEE-EECSSGGGEEEEEECTTCCEEEEECSSCSCCHHHHHHHHTSSCCCCEEEEEEEEECTTTTCB--CCEEEEEEEEE
T ss_pred EEEE-EccCCcCceEEEEECCCCCEEEeeccCCCccccccccccccccccCCccCcEEEehhhcCCC--CCCcEEEEEEE
Confidence 5444 688999999998876554311 111 1467888999998888864 45778887776
Q ss_pred E
Q 040133 582 K 582 (1013)
Q Consensus 582 ~ 582 (1013)
.
T Consensus 554 ~ 554 (600)
T 2oxa_A 554 V 554 (600)
T ss_dssp B
T ss_pred C
Confidence 4
No 22
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=3.2e-49 Score=436.75 Aligned_cols=276 Identities=28% Similarity=0.410 Sum_probs=229.2
Q ss_pred cccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccc--cccccCCC--CCCCCCCCCCcchhhhhhhccCC-CcccccC
Q 040133 181 SLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNI--KERTNWTN--EDTLNDNLGHGTFVAGVVAGQDA-ECLGFAP 255 (1013)
Q Consensus 181 ~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i--~~~~~~~~--~~~~~D~~gHGThVAGIIAg~~~-~~~GVAP 255 (1013)
.+.+++++|+.+.+++||+|||||||||.+||+|.+. ....++.. .+...|.+||||||||||+|+.+ ++.||||
T Consensus 6 ~i~G~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~GVAp 85 (306)
T 4h6w_A 6 NIPGLKKLWSETRGDPKICVAVLDGIVDQNHPCFIGADLTRLPSLVSGEANANGSMSTHGTHVASIIFGQHDSPVTGIAP 85 (306)
T ss_dssp -CTTHHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCEEEECC----------CCCCHHHHHHHHHHHCCTTSSSCCSST
T ss_pred CCcCHHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCcccCCCcccCCCCCCCCCCCCchHHHHHHHHccccCCcceecc
Confidence 4458899999998789999999999999999999853 22233322 22345678999999999999754 4789999
Q ss_pred CCeEEEEEEecCC-CCCchHHHHHHHHHHHhCCCeEEEecCCCC---CCCChHHHHHHHHHhcCCeEEEEeccCCCCCCC
Q 040133 256 DTEIYAFRVFTDA-QVSYTSWFLDAFNYAIATNIDVLNLSIGGP---DYLDLPFIEKIWEITANNIIMVSAIGNDGPLYG 331 (1013)
Q Consensus 256 ~A~I~~vrV~~~~-g~~~~s~il~Ai~~Ai~~gadVINlS~G~~---~~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~ 331 (1013)
+|+|+.+|++.+. .......+++||+||++++++|||+|||.. ...+..+.+++..+.++|+++|+|+||+|. .
T Consensus 86 ~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~--~ 163 (306)
T 4h6w_A 86 QCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGC--E 163 (306)
T ss_dssp TSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSS--B
T ss_pred ccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCc--c
Confidence 9999999998654 345677899999999999999999999953 234556778899999999999999999997 4
Q ss_pred CCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCCchhHHHHHHHHH
Q 040133 332 TLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVV 411 (1013)
Q Consensus 332 ~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sGTSmAAP~VAGva 411 (1013)
...+|++.+++|+||+++..+.+++||++|.. ..+|||+|||.+|+++.++++|..++|||||||+|||++
T Consensus 164 ~~~~Pa~~~~vi~Vga~~~~~~~~~~s~~g~~---------~~~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG~~ 234 (306)
T 4h6w_A 164 CLHVPASLPTVLAVGAMDDQGKPVDFSNWGDA---------YQKQGILAPGKDILGAKPNGGTIRLSGTSFATPIVSGVA 234 (306)
T ss_dssp CEEETTTSTTCEEEEEECTTSCBCSSSCBCHH---------HHHHEEEEECSSEEEECTTSCEEEECSHHHHHHHHHHHH
T ss_pred cccccccCCcceEEEEecCCCCccccccccCC---------cCcceeecCCcCcccccCCCceeccCCCcchhHHHHHHH
Confidence 56789999999999999999999999999942 348999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCCC---CCccccccCHHHHHHHHHhcC
Q 040133 412 CLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNM---YEQGAGRVDLLESYEILKNYQ 469 (1013)
Q Consensus 412 ALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~---~~~G~G~lna~~Av~~l~~~~ 469 (1013)
|||++++++ +...++|++||++|++||+++...+. ..+|+|+||+.+|++.+....
T Consensus 235 All~s~~~~--~~p~~t~~~v~~~L~~tA~~~~~~~~~~~~~~G~G~ln~~~Av~~~~~~~ 293 (306)
T 4h6w_A 235 ALLLSLQIK--RGEKPDPQKVKNALLASATPCNPKDTDDQSRCLMGKLNILDAIEHLTGET 293 (306)
T ss_dssp HHHHHHHHH--TTCCCCHHHHHHHHHHTCBCCCTTTCSCGGGGTTCBCCHHHHHHHHSSCC
T ss_pred HHHHHHHHh--hCCCCCHHHHHHHHHhhCccCCCCCCCCCCCcceeecCHHHHHHHHHCCC
Confidence 999976522 11229999999999999999876543 357999999999999886544
No 23
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=9.2e-49 Score=443.40 Aligned_cols=274 Identities=20% Similarity=0.283 Sum_probs=196.4
Q ss_pred cCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccccc---cccCCCC---------------------------------
Q 040133 183 FGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKE---RTNWTNE--------------------------------- 226 (1013)
Q Consensus 183 i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~~---~~~~~~~--------------------------------- 226 (1013)
.++.++|+++.+|++|+|||||||||++||+|++... ...|.+.
T Consensus 18 pG~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (357)
T 4h6x_A 18 PGLADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVI 97 (357)
T ss_dssp TTHHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHC
T ss_pred cCHHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccccccccccc
Confidence 4788999999999999999999999999999984211 0111111
Q ss_pred ---CCCCCCCCCcchhhhhhhccCC-CcccccCCCeEEEEEEecCC-----CCCchHHHHHHHHHHHhCCCeEEEecCCC
Q 040133 227 ---DTLNDNLGHGTFVAGVVAGQDA-ECLGFAPDTEIYAFRVFTDA-----QVSYTSWFLDAFNYAIATNIDVLNLSIGG 297 (1013)
Q Consensus 227 ---~~~~D~~gHGThVAGIIAg~~~-~~~GVAP~A~I~~vrV~~~~-----g~~~~s~il~Ai~~Ai~~gadVINlS~G~ 297 (1013)
....|.+||||||||||||+.+ ++.||||+|+|+++|++... ......++++||+||++++++|||||||.
T Consensus 98 ~~~~~~~D~~gHGThVAGiiag~~~~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~ 177 (357)
T 4h6x_A 98 PDTKDRIVLNDHACHVTSTIVGQEHSPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANIIHCAFCR 177 (357)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCTTSSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEEEEC---
T ss_pred CCCCCCcCCCCcHHHHHHHHhccCCCCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCEEeecccc
Confidence 0112446899999999999754 47899999999999987432 22345568899999999999999999997
Q ss_pred CCC---CChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCC
Q 040133 298 PDY---LDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRV 374 (1013)
Q Consensus 298 ~~~---~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~ 374 (1013)
+.. ....+.+++.++.++|+++|+||||+|. ....+|+.++++|+|||++.++.++.|||+|. +..
T Consensus 178 ~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~--~~~~~Pa~~~~vi~Vga~~~~~~~~~fSn~G~---------~~~ 246 (357)
T 4h6x_A 178 PTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSN--ESWCLPAVLPGTLAVGAAKVDGTPCHFSNWGG---------NNT 246 (357)
T ss_dssp --------CHHHHHHHHHHHTTCEEEEECC-----------------CEEEEEECTTSSBCTTCC------------CTT
T ss_pred CCccccchhHHHHHHHHHhhCCeEEEecccCCCC--CcCcCcccCCCCceEEEeccCCcccccccCCC---------CCC
Confidence 532 2345778889999999999999999987 45678999999999999999999999999994 234
Q ss_pred cceEEecCCceeeecCCCC-eeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCC---CCCC
Q 040133 375 KPDVVAYGREIMGSKISTG-CKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGP---NMYE 450 (1013)
Q Consensus 375 KpDI~APG~~I~St~~~~~-y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~---~~~~ 450 (1013)
||||+|||.+|+++.+.++ |..++|||||||+|||++|||++++|+ ....|++++||++|++||+++... ....
T Consensus 247 ~~di~APG~~i~s~~~~~~~~~~~sGTS~AaP~vaG~~All~s~~~~--~~~~lt~~~v~~~L~~tA~~~~~~~~~~~~~ 324 (357)
T 4h6x_A 247 KEGILAPGEEILGAQPCTEEPVRLTGTSMAAPVMTGISALLMSLQVQ--QGKPVDAEAVRTALLKTAIPCDPEVVEEPER 324 (357)
T ss_dssp TTEEEEECSSEEECCTTCSCCEEECSHHHHHHHHHHHHHHHHHHHHH--TTCCCCHHHHHHHHHHC--------------
T ss_pred ccceeecCCCeEeccCCCCcccccCcHHHHHHHHHHHHHHHHHhhHh--hCCCCCHHHHHHHHHhhCccCCCCCCCCccc
Confidence 8999999999999987655 567899999999999999999987665 233499999999999999987543 2346
Q ss_pred ccccccCHHHHHHHHHhcC
Q 040133 451 QGAGRVDLLESYEILKNYQ 469 (1013)
Q Consensus 451 ~G~G~lna~~Av~~l~~~~ 469 (1013)
+|+|+||+.+|++++....
T Consensus 325 ~G~G~vn~~~A~~~~~~~~ 343 (357)
T 4h6x_A 325 CLRGFVNIPGAMKVLFGQP 343 (357)
T ss_dssp CTTCBCCHHHHHHHHHSCC
T ss_pred ceeEEecHHHHHHHHhCCC
Confidence 8999999999999887543
No 24
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.6e-48 Score=453.02 Aligned_cols=270 Identities=25% Similarity=0.387 Sum_probs=229.6
Q ss_pred CccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCC---CCCCCCCCCcchhh
Q 040133 165 TINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNE---DTLNDNLGHGTFVA 240 (1013)
Q Consensus 165 ~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~---~~~~D~~gHGThVA 240 (1013)
..||+++. |+++++|+.+ |+||+|||||||||.+||+|.+ +..+.++... ..+.|..|||||||
T Consensus 3 ~~~W~l~~----------i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~~~~~~~~~~~~~~~~~~d~~gHGT~vA 70 (441)
T 1y9z_A 3 TTPWGQTF----------VGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQPGNNNAHGTHVA 70 (441)
T ss_dssp CCCHHHHH----------TTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTSEEEECCCTTSCCTTCCCSSCCHHHHHH
T ss_pred CCCCChhh----------cChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcCcccCcccCCCCCCCCCCCCCCcHHHHH
Confidence 35788876 4778899974 7799999999999999999985 3334444322 23457789999999
Q ss_pred hhhhccCC--CcccccCCC--eEEEEEEecCCCCCchHHHHHHHHHHHhC-CCeEEEecCCCCCCCChHHHHHHHHHhcC
Q 040133 241 GVVAGQDA--ECLGFAPDT--EIYAFRVFTDAQVSYTSWFLDAFNYAIAT-NIDVLNLSIGGPDYLDLPFIEKIWEITAN 315 (1013)
Q Consensus 241 GIIAg~~~--~~~GVAP~A--~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~-gadVINlS~G~~~~~~~~~~~ai~~a~~~ 315 (1013)
|||++..+ ++.||||+| +|+.+|+++..+.+..+++++||+||+++ +++|||||||.+.. ...+.+++.++.++
T Consensus 71 giia~~~~~~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G~~~~-~~~~~~ai~~a~~~ 149 (441)
T 1y9z_A 71 GTIAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGS-TTTERNALNTHYNN 149 (441)
T ss_dssp HHHHCCCSSSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCCBSCC-BHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCCCCCCC-CHHHHHHHHHHHHC
Confidence 99999754 378999995 89999999887767788899999999999 99999999998754 34677889999999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCC----
Q 040133 316 NIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIS---- 391 (1013)
Q Consensus 316 GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~---- 391 (1013)
|+++|+||||+|.. ...+|+.++++|+|||++.++.++.||++|+ ++||+|||.+|.++...
T Consensus 150 gv~vV~AAGN~g~~--~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~------------~vdv~ApG~~i~s~~~~g~g~ 215 (441)
T 1y9z_A 150 GVLLIAAAGNAGDS--SYSYPASYDSVMSVAAVDSNLDHAAFSQYTD------------QVEISGPGEAILSTVTVGEGR 215 (441)
T ss_dssp TCEEEEECCSSSSS--BCCBTTTSTTEEEEEEECTTCCBCTTSCCCT------------TEEEEEECSSEEEECSTTCEE
T ss_pred CCEEEEecCCCCCC--CCCCCCCCCCeEEEEEECCCCCCCccccCCC------------ceEEEeccCCeeccccCCCcc
Confidence 99999999999974 4568999999999999999999999999996 79999999988765431
Q ss_pred --------------------------------------------------------------------------------
Q 040133 392 -------------------------------------------------------------------------------- 391 (1013)
Q Consensus 392 -------------------------------------------------------------------------------- 391 (1013)
T Consensus 216 ~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~ 295 (441)
T 1y9z_A 216 LADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINST 295 (441)
T ss_dssp EEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSSSSCTHHHHH
T ss_pred cceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEeccccCcccccHHHHH
Confidence
Q ss_pred ----------------------------------------------------------------CCeeeeCCchhHHHHH
Q 040133 392 ----------------------------------------------------------------TGCKSLSGTSVASPVV 407 (1013)
Q Consensus 392 ----------------------------------------------------------------~~y~~~sGTSmAAP~V 407 (1013)
+.|..++|||||||||
T Consensus 296 ~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~t~~~~~~~~y~~~sGTSmAaP~V 375 (441)
T 1y9z_A 296 KACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHV 375 (441)
T ss_dssp HHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSEEEEEEEEEESEEEECSHHHHHHHH
T ss_pred HHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCCcccccccCCCceeecccccCCccc
Confidence 1245689999999999
Q ss_pred HHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCC-CCCccccccCHHHHHHHHHh
Q 040133 408 AGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPN-MYEQGAGRVDLLESYEILKN 467 (1013)
Q Consensus 408 AGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~-~~~~G~G~lna~~Av~~l~~ 467 (1013)
||++|||+|++|+ |+|++||++|++||+++.... ...+|+|+||+.+|+++++.
T Consensus 376 AG~aALl~~~~p~------~sp~~ik~~L~~TA~~~~~~g~~~~~G~G~vn~~~A~~~~~~ 430 (441)
T 1y9z_A 376 SGVATLVWSYHPE------CSASQVRAALNATADDLSVAGRDNQTGYGMINAVAAKAYLDE 430 (441)
T ss_dssp HHHHHHHHHHCTT------SCHHHHHHHHHHHSBCCSSSSCBTTTBTCBCCHHHHHHHHHH
T ss_pred chHHHHHHHHCCC------CCHHHHHHHHHhhchhhccCCCcccccccccCHHHHHHHHHh
Confidence 9999999999999 999999999999999886543 45689999999999998763
No 25
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.5e-48 Score=427.42 Aligned_cols=264 Identities=27% Similarity=0.379 Sum_probs=219.9
Q ss_pred CCC-CCcEEEEEcCCCCCCCCCcccc-cccccCCCCC---CCCCCCCCcchhhhhhhccCCC-cccccCCCeEEEEEEec
Q 040133 193 YTG-AKVKMAIFDTGIRENHPHFRNI-KERTNWTNED---TLNDNLGHGTFVAGVVAGQDAE-CLGFAPDTEIYAFRVFT 266 (1013)
Q Consensus 193 ~tG-~GV~VaVIDTGId~~Hpdl~~i-~~~~~~~~~~---~~~D~~gHGThVAGIIAg~~~~-~~GVAP~A~I~~vrV~~ 266 (1013)
++| +||+|||||||||.+||+|++. ....++...+ ...|.+||||||||||+|+.++ +.||||+|+|+.+|++.
T Consensus 4 l~G~~gV~VaViDtGid~~Hpdl~g~~~~~~~~~~~~~~~~d~~~~gHGT~VAGiiag~~~~~~~GvAp~a~l~~~kv~~ 83 (282)
T 3zxy_A 4 LKGDHNIRVAILDGPVDIAHPCFQGADLTVLPTLAPTAARSDGFMSAHGTHVASIIFGQPETSVPGIAPQCRGLIVPIFS 83 (282)
T ss_dssp CCCCTTSEEEEEESCCCTTSGGGTTCEEEECCCSSCCCCCTTCHHHHHHHHHHHHHHCCTTSSSCCSSTTSEEEEEECSC
T ss_pred CcCCCCCEEEEEcCCCCCCChhHCCCeeecCcCCCCCCCCCCCCCCCcccceeehhhccCCceeeeeccccceEeeEeec
Confidence 578 6999999999999999999853 2333332222 2223468999999999997654 78999999999999986
Q ss_pred CCC-CCchHHHHHHHHHHHhCCCeEEEecCCCC---CCCChHHHHHHHHHhcCCeEEEEeccCCCCCCCCCCCCCCCCCc
Q 040133 267 DAQ-VSYTSWFLDAFNYAIATNIDVLNLSIGGP---DYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDV 342 (1013)
Q Consensus 267 ~~g-~~~~s~il~Ai~~Ai~~gadVINlS~G~~---~~~~~~~~~ai~~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~V 342 (1013)
+.+ ......+++||+||++++++|||||||.. ...+..+.+++.++.++|+++|+||||+|. ....+|+..+++
T Consensus 84 ~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~--~~~~~Pa~~~~v 161 (282)
T 3zxy_A 84 DDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGC--DCLHVPAALPAV 161 (282)
T ss_dssp SSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCS--SCEEETTTSTTC
T ss_pred cccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHHHHHHHHHhhcCceEEEecccCCC--ccccCcccccee
Confidence 543 45677899999999999999999999964 233556778899999999999999999997 456789999999
Q ss_pred eEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCCchhHHHHHHHHHHHHHHhCCCCC
Q 040133 343 IGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENN 422 (1013)
Q Consensus 343 ItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~~P~~~ 422 (1013)
|+|||++.++.++.||++|.. ..+|||+|||.+|+++.++++|..++|||||||+|||++|||++++|+
T Consensus 162 i~Vga~~~~~~~~~~S~~~~~---------~~~~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~-- 230 (282)
T 3zxy_A 162 LAVGAMDDHGHPLDFSNWGST---------YEQQGILAPGEDILGAKPGGGTERLSGTAFATPIVSGVAALLLSEQVR-- 230 (282)
T ss_dssp EEEEEECTTSCBCSSSCCCHH---------HHHHEEEEECSSEEEECTTSCEEEECSHHHHHHHHHHHHHHHHHHHHH--
T ss_pred EEEEEEcCCCccccccCCCCC---------ccccceeccCcceeeecCCCceeecCCCcccchHHHHHHHHHHHHhHh--
Confidence 999999999999999999842 247999999999999999999999999999999999999999998754
Q ss_pred cCCCCCHHHHHHHHHhccccCCCCC---CCCccccccCHHHHHHHHHhcC
Q 040133 423 RKNILNPASMKQALVEGAAKLSGPN---MYEQGAGRVDLLESYEILKNYQ 469 (1013)
Q Consensus 423 ~~~~ltp~~VK~~L~~TA~~~~~~~---~~~~G~G~lna~~Av~~l~~~~ 469 (1013)
....++|++||++|++||+++.... ...+|+|+||+.+|+++++..+
T Consensus 231 ~~~~~~~~~vk~~L~~tA~~~~~~~~~~~~~~G~G~ln~~~A~~~~~~g~ 280 (282)
T 3zxy_A 231 RGETPDPQKVRQLLLQSALPCDDDAPEQARRCLAGRLNVSGAFTLLKGGD 280 (282)
T ss_dssp TTCCCCHHHHHHHHHHHCBCC-------CGGGTTCBCCHHHHHHHHHHTC
T ss_pred hCCCCCHHHHHHHHHhhCeeCCCCCCCccCceeeeEeCHHHHHHHHhCcC
Confidence 2234899999999999998875432 3468999999999999988643
No 26
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=3.6e-47 Score=456.97 Aligned_cols=396 Identities=18% Similarity=0.188 Sum_probs=279.3
Q ss_pred ccccCCcccccccccccc------ccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccccc-c-cccCCCC----C
Q 040133 160 TTSNCTINWRRHLLMQRS------QVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIK-E-RTNWTNE----D 227 (1013)
Q Consensus 160 ~~~~~~~~W~l~~~~~~~------~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~-~-~~~~~~~----~ 227 (1013)
+++....||++++..|.. ....+||+.++|++|++|+||+|||||||||++||||++.. . .+++.+. .
T Consensus 28 ~DPl~~~QW~l~n~gq~~~~~~~g~~g~Dinv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~~~~~~~~~~~~~dp~ 107 (600)
T 3hjr_A 28 ANPLQDQQWYLLNSGQDGFSARGGIAGNDLNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNVRPGSKNVVTGSDDPT 107 (600)
T ss_dssp CCTTGGGCTTTCCSSCCTTSSCCCCTTCSCCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGBCSCCBCTTTSSSCCC
T ss_pred CCCChhhccCcccCCCccccccCCCCCcccCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhccccCcceeecCCCCCC
Confidence 577888999999876531 23457999999999999999999999999999999998532 2 2333222 1
Q ss_pred CCCCCCCCcchhhhhhhccCCC--cccccCCCeEEEEEEecCCCCCchHHHHHHH-HHHHhCCCeEEEecCCCCCC----
Q 040133 228 TLNDNLGHGTFVAGVVAGQDAE--CLGFAPDTEIYAFRVFTDAQVSYTSWFLDAF-NYAIATNIDVLNLSIGGPDY---- 300 (1013)
Q Consensus 228 ~~~D~~gHGThVAGIIAg~~~~--~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai-~~Ai~~gadVINlS~G~~~~---- 300 (1013)
+..|+++|||||||+|||.+++ +.||||+|+|+++|++++.+....++++.|+ .++..++++|+|+|||....
T Consensus 108 p~~~~~gHGThVAGiIAa~~n~~g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~~~ 187 (600)
T 3hjr_A 108 PTDPDTAHGTSVSGIIAAVDNAIGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSVVDPRS 187 (600)
T ss_dssp CCSTTCCHHHHHHHHHHCCSSSSSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCSSCCC
T ss_pred CCCCCCChHHHHHHHHhEeCCCCCcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCccccCCcc
Confidence 2346689999999999997554 6899999999999999887777777777776 56778899999999996421
Q ss_pred CChH----HHHHHHH--HhcCCeEEEEeccCCCC--------------------CCCCCCCCCCCCCceEEeeeecCCCc
Q 040133 301 LDLP----FIEKIWE--ITANNIIMVSAIGNDGP--------------------LYGTLNNPADQSDVIGVGGIDYNDHI 354 (1013)
Q Consensus 301 ~~~~----~~~ai~~--a~~~GIivVaAAGN~G~--------------------~~~~i~~PA~~~~VItVGAvd~~g~~ 354 (1013)
.... +..++.. ...+|+++|+||||++. ..+.+..|+..+.+|+|||++.++.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsVgA~~~~g~~ 267 (600)
T 3hjr_A 188 ANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSALNADGVR 267 (600)
T ss_dssp SCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEEEEECTTSSB
T ss_pred CCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcceEEeeecCCCCE
Confidence 1111 1122222 23579999999999753 12234456777889999999999999
Q ss_pred cccCCCCCCccccCCCCCCCcceEEecCCcee-------eec---------------------------CCCCeeeeCCc
Q 040133 355 ASFSSRGMSTWEIPHGYGRVKPDVVAYGREIM-------GSK---------------------------ISTGCKSLSGT 400 (1013)
Q Consensus 355 a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~-------St~---------------------------~~~~y~~~sGT 400 (1013)
+.||++|+. ++++|||+++. .+. ..+.|..++||
T Consensus 268 a~yS~~G~~------------v~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGT 335 (600)
T 3hjr_A 268 SSYSSVGSN------------IFLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGT 335 (600)
T ss_dssp CTTCCBCTT------------CCEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSH
T ss_pred eecccCCcc------------eeeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccc
Confidence 999999974 56666665421 110 01236789999
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCC--------------------------------C
Q 040133 401 SVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPN--------------------------------M 448 (1013)
Q Consensus 401 SmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~--------------------------------~ 448 (1013)
|||||||||++|||+|++|+ ||+++||++|++||++++..+ .
T Consensus 336 SmAaP~VAGvaALll~a~P~------lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s 409 (600)
T 3hjr_A 336 SSATPSTSGAMALLMSAYPD------LSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFS 409 (600)
T ss_dssp HHHHHHHHHHHHHHHHHSTT------SCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEB
T ss_pred cccchhHHHHHHHHHHHCCC------CCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEc
Confidence 99999999999999999999 999999999999999875422 1
Q ss_pred CCccccccCHHHHHHHHHhcCCCcccCCcccccCCCCCCCCcc-cccccCCCccEEEEEEeecCCCCCeeEEEEEcceee
Q 040133 449 YEQGAGRVDLLESYEILKNYQPRASIFPSVLDYTDCPYSWPFC-RQPLYAGAMPVIFNVTILNGWEGNLLNIRFTYSEVI 527 (1013)
Q Consensus 449 ~~~G~G~lna~~Av~~l~~~~p~~~~~p~~l~~~~~~~~~p~~-~~~~~~g~~pvt~n~ti~n~~~g~~~~v~~s~s~v~ 527 (1013)
..+|||++|+.+|+++++++++.... .........-... ......+..++...+++.+.. ...+|.++.+ +.
T Consensus 410 ~~yGfG~vDA~~aV~~A~~w~~v~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~lE~V~v~v~-i~ 482 (600)
T 3hjr_A 410 PTYGFGLIDVNKALELAANHQPLPPL----VQLPWQKINVTGSAAAIADVGNSPTSSTTRIATPL--TVEAVQVMVS-LD 482 (600)
T ss_dssp TTTBTCBCCHHHHHHHHTTCCCCCCC----EECCCEEEECCGGGGEECTBCSSCEEEEEEECSCC--BEEEEEEEEE-EE
T ss_pred cccCCceecHHHHHHHhhcCcccCCc----eecccccccccCcccccccccCcceeeeeeeccCC--EEEEEEEEEE-Ee
Confidence 25799999999999999998853221 1110000000000 111123344555665555533 2344444444 67
Q ss_pred eecccEEEEEEEEcCCCccc-------------e------eeEEeEEEEEEEcCCCCCCCCCcceeEEEEEEEE
Q 040133 528 WPWTGYLALHMQIKEEGAKF-------------S------GEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLK 582 (1013)
Q Consensus 528 ~p~~G~~~v~vtv~~~~~~f-------------~------g~~~G~v~~tv~s~~~~~~~~~~~~~~~~~v~v~ 582 (1013)
++..|.+.|+++.+...... + ....|...+++++...++|+ -..+|+|.|+..
T Consensus 483 h~~rgdL~i~L~SP~Gt~s~Ll~~~~~~~~~~~d~~~~~~~~~~g~~~w~f~s~~~wGE~--~~G~WtL~V~D~ 554 (600)
T 3hjr_A 483 HQRLPDLLIELVSPAGTRSILLSPFNSLVGQSLDQQQLGFVRTKGLRDMRMLSNKFYGES--AQGTWRLEVTDV 554 (600)
T ss_dssp CSSGGGEEEEEECTTCCEEEEECSSCSCCHHHHHHHHTSSCCCCEEEEEEEEECTTTTCB--CCEEEEEEEEEB
T ss_pred cCCCCceEEEEECCCCCEEEeCCCCCccccccccccccCcccccCcccceeecccccCCC--CCccEEEEEEEC
Confidence 88999999987765543210 0 11245678999998888865 357788887764
No 27
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.6e-48 Score=451.90 Aligned_cols=278 Identities=31% Similarity=0.418 Sum_probs=236.7
Q ss_pred ccccCchhhhh-CCCCCCCcEEEEEcCCCCC------CCCCccc-ccccccCCCCCCCCCCCCCcchhhhhhhccCCCcc
Q 040133 180 TSLFGADALWG-KGYTGAKVKMAIFDTGIRE------NHPHFRN-IKERTNWTNEDTLNDNLGHGTFVAGVVAGQDAECL 251 (1013)
Q Consensus 180 ~~~i~a~~aW~-~g~tG~GV~VaVIDTGId~------~Hpdl~~-i~~~~~~~~~~~~~D~~gHGThVAGIIAg~~~~~~ 251 (1013)
..+++++++|+ .|++|+||+||||||||+. .||+|.+ +...++|.......|..||||||||+|+|++....
T Consensus 5 ~~~i~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~i~~~~~~~~~~~~~d~~gHGT~VAgiiag~g~~~~ 84 (434)
T 1wmd_A 5 RGIVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITALYALGRTNNANDTNGHGTHVAGSVLGNGSTNK 84 (434)
T ss_dssp HHHTTHHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTCEEEEEETTTTTCCCCSSSHHHHHHHHHHCCSSSSC
T ss_pred hhhhCchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCCEeeeccccCCCCCCCCCCcHHHHHHHHHcCCCCce
Confidence 35689999998 7999999999999999999 7999985 44556776666677889999999999999877789
Q ss_pred cccCCCeEEEEEEecCCCCC--chHHHHHHHHHHHhCCCeEEEecCCCCCC-CChHHHHHHHHH-hcCCeEEEEeccCCC
Q 040133 252 GFAPDTEIYAFRVFTDAQVS--YTSWFLDAFNYAIATNIDVLNLSIGGPDY-LDLPFIEKIWEI-TANNIIMVSAIGNDG 327 (1013)
Q Consensus 252 GVAP~A~I~~vrV~~~~g~~--~~s~il~Ai~~Ai~~gadVINlS~G~~~~-~~~~~~~ai~~a-~~~GIivVaAAGN~G 327 (1013)
||||+|+|+.+|+++..+.. ..+.+.++|++|++++++|||||||.... ......+++.++ .++|+++|+||||+|
T Consensus 85 GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~id~~~~~~gvlvV~AAGN~g 164 (434)
T 1wmd_A 85 GMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEG 164 (434)
T ss_dssp CSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEECCCBCCTTCCCHHHHHHHHHHHHSSCEEEEECCSCT
T ss_pred eeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEecCCCCcCCcCCHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 99999999999999766533 45678999999999999999999998642 223455666665 578999999999999
Q ss_pred CCCCCCCCCCCCCCceEEeeeec-----------CCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecC------
Q 040133 328 PLYGTLNNPADQSDVIGVGGIDY-----------NDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKI------ 390 (1013)
Q Consensus 328 ~~~~~i~~PA~~~~VItVGAvd~-----------~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~------ 390 (1013)
.+..++.+|+.++++|+|||++. .+.++.||++| |..+|++||||+|||++|.++..
T Consensus 165 ~~~~~~~~Pa~~~~vitVga~~~~~~~~~~~~~~~~~~a~fS~~G------~~~~g~~kpdi~ApG~~i~s~~~~~~~~~ 238 (434)
T 1wmd_A 165 PNGGTISAPGTAKNAITVGATENLRPSFGSYADNINHVAQFSSRG------PTKDGRIKPDVMAPGTFILSARSSLAPDS 238 (434)
T ss_dssp TSSSCCCBSTTCSSSEEEEEECCSCGGGCGGGSCTTSBCTTSCCC------CCTTSCCCCCEEEECSSEEEECCTTCCGG
T ss_pred CCCcccCCcccCCccEEEecccccCcccCcccCCCCccccccCCC------CCCCCCCCceEEcCCCCeEecCCCCCCCc
Confidence 87777899999999999999988 78999999999 55689999999999999999874
Q ss_pred ------CCCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCC-CCCCCccccccCHHHHHH
Q 040133 391 ------STGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSG-PNMYEQGAGRVDLLESYE 463 (1013)
Q Consensus 391 ------~~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~-~~~~~~G~G~lna~~Av~ 463 (1013)
.+.|..++|||||||+|||++|||++++|+.. ...+++++||++|++||+++.. .....+|||++|+.+|++
T Consensus 239 ~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~-~~~~s~~~vk~~L~~tA~~~~~~~~~~~~G~G~vd~~~a~~ 317 (434)
T 1wmd_A 239 SFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNR-GITPKPSLLKAALIAGAADIGLGYPNGNQGWGRVTLDKSLN 317 (434)
T ss_dssp GSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHS-SSCCCHHHHHHHHHHHCBCCSSCSSCTTTTTCBCCHHHHHT
T ss_pred ccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhcc-CCCCCHHHHHHHHHcCCcccCCCCCCccCCcCeEeHHHhcc
Confidence 46789999999999999999999999998621 1235899999999999988532 334578999999999996
Q ss_pred H
Q 040133 464 I 464 (1013)
Q Consensus 464 ~ 464 (1013)
.
T Consensus 318 ~ 318 (434)
T 1wmd_A 318 V 318 (434)
T ss_dssp C
T ss_pred c
Confidence 3
No 28
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.1e-47 Score=422.09 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=226.2
Q ss_pred CCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCCC-CCCCCCCCcchhhh
Q 040133 164 CTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNED-TLNDNLGHGTFVAG 241 (1013)
Q Consensus 164 ~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~~-~~~D~~gHGThVAG 241 (1013)
.+.+|+++++.+. .+++..+|+.+++|+||+||||||||+.+||+|.+ +..+++|...+ ...|..+|||||||
T Consensus 2 ~~~~W~l~~i~~~-----~~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAg 76 (284)
T 1sh7_A 2 SNAIWGLDRIDQR-----NLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGRSVSGYDFVDNDADSSDCNGHGTHVAG 76 (284)
T ss_dssp BSCCHHHHHHTCS-----SSSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTCEEEEEETTTTBSCCCCSSSHHHHHHH
T ss_pred CCCCcChhhcCCc-----ccCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcCCccccccccCCCCCCCCCCCcHHHHHH
Confidence 4578999988654 25778899999999999999999999999999985 34456665543 46788999999999
Q ss_pred hhhccCCCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhC--CCeEEEecCCCCCCCChHHHHHHHHHhcCCeEE
Q 040133 242 VVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIAT--NIDVLNLSIGGPDYLDLPFIEKIWEITANNIIM 319 (1013)
Q Consensus 242 IIAg~~~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~--gadVINlS~G~~~~~~~~~~~ai~~a~~~GIiv 319 (1013)
||+|.. .||||+|+|+.+|+++..+.+..+.+++||+|++++ +++|||||||... ...+.+++.++.++|+++
T Consensus 77 iia~~~---~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~~--~~~~~~ai~~a~~~gi~v 151 (284)
T 1sh7_A 77 TIGGSQ---YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGGQ--STALDSAVQGAIQSGVSF 151 (284)
T ss_dssp HHHCTT---TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBSC--CHHHHHHHHHHHHTTCEE
T ss_pred HHhccc---CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCCC--CHHHHHHHHHHHHCCCEE
Confidence 999874 799999999999999888778889999999999984 7999999999873 567888999999999999
Q ss_pred EEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCeeeeCC
Q 040133 320 VSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSG 399 (1013)
Q Consensus 320 VaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~~~sG 399 (1013)
|+||||+|... ...+|+..+++|+|||++.++.++.||++|+ +|||+|||.+|.++..++.|..++|
T Consensus 152 V~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~------------~~di~ApG~~i~s~~~~~~~~~~sG 218 (284)
T 1sh7_A 152 MLAAGNSNADA-CNTSPARVPSGVTVGSTTSSDSRSSFSNWGS------------CVDLFAPGSQIKSAWYDGGYKTISG 218 (284)
T ss_dssp EEECCSSSSBG-GGSBTTTCTTSEEEEEECTTSBBCTTCCBST------------TCCEEEECSSEEEECTTSSEEEECS
T ss_pred EEECCcCCCCC-CccccccCCCeEEEEEecCCCCcCcccCCCC------------ccEEEeccCCeEEecCCCCEEEccC
Confidence 99999999742 3568999999999999999999999999996 5899999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCC
Q 040133 400 TSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGP 446 (1013)
Q Consensus 400 TSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~ 446 (1013)
||||||+|||++|||++++|+ +++++||++|++||++..-.
T Consensus 219 TS~AaP~vaG~aAll~~~~p~------lt~~~v~~~L~~tA~~~~~~ 259 (284)
T 1sh7_A 219 TSMATPHVAGVAALYLQENNG------LTPLQLTGLLNSRASENKVS 259 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHHSEESCCB
T ss_pred hHHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHhhCccCCcc
Confidence 999999999999999999999 99999999999999876543
No 29
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=3.7e-47 Score=416.23 Aligned_cols=253 Identities=30% Similarity=0.414 Sum_probs=223.7
Q ss_pred cCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCCC-CCCCCCCCcchhh
Q 040133 163 NCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNED-TLNDNLGHGTFVA 240 (1013)
Q Consensus 163 ~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~~-~~~D~~gHGThVA 240 (1013)
+.+.+|+++.+.+. .+++..+|+.+++|+||+||||||||+.+||+|.+ +..+++|...+ ...|..+||||||
T Consensus 3 q~~~~W~l~~i~~~-----~~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~d~~~~~~~~~d~~gHGT~vA 77 (278)
T 2b6n_A 3 QPSPTWGIDRIDQR-----NLPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGRASSGYDFIDNDYDATDCNGHGTHVA 77 (278)
T ss_dssp EESCCHHHHHHTCS-----SSSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTCEEEEEETTTTBSCCCCSSSHHHHHH
T ss_pred cCCCCCCccccCCc-----cCCcchhcccCCCCCCCEEEEEeCCCCCCChhHhcccccCeecCCCCCCCCCCCCcHHHHH
Confidence 35578999987653 35678899999999999999999999999999986 34456665543 4578899999999
Q ss_pred hhhhccCCCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHh--CCCeEEEecCCCCCCCChHHHHHHHHHhcCCeE
Q 040133 241 GVVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIA--TNIDVLNLSIGGPDYLDLPFIEKIWEITANNII 318 (1013)
Q Consensus 241 GIIAg~~~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~--~gadVINlS~G~~~~~~~~~~~ai~~a~~~GIi 318 (1013)
|||+|.. .||||+|+|+.+|+++..+.+..+.+++||+|+++ .+++|||||||... ...+.+++.++.++|++
T Consensus 78 giia~~~---~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~--~~~~~~ai~~a~~~gi~ 152 (278)
T 2b6n_A 78 GTIGGST---YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA--SQATDDAVNAAVAAGIT 152 (278)
T ss_dssp HHHHCTT---TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC--CHHHHHHHHHHHHTTCE
T ss_pred HHHHCCC---cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc--CHHHHHHHHHHHHCCCE
Confidence 9999873 89999999999999988777888999999999997 59999999999865 46788899999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCC--CCeee
Q 040133 319 MVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIS--TGCKS 396 (1013)
Q Consensus 319 vVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~--~~y~~ 396 (1013)
+|+||||+|.+. ...+|+..+++|+|||++.++.++.||++|+ +|||+|||.+|.++... +.|..
T Consensus 153 vV~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~------------~~di~ApG~~i~s~~~~~~~~~~~ 219 (278)
T 2b6n_A 153 FVVAAGNDNSNA-CNYSPARAADAITVGSTTSNDSRSSFSNYGT------------CLDIYAPGSSITSSWYTSNSATNT 219 (278)
T ss_dssp EEEECCSSSSBG-GGEETTTCTTSEEEEEECTTSBBCTTCCBST------------TCCEEEECSSEEEECTTSTTCEEE
T ss_pred EEEEeCCCCCCC-CCcCcccCCCeEEEEeeCCCCCcCCcCCCCC------------CCeEEeCCCCeECcccCCCCCEEE
Confidence 999999999753 3457999999999999999999999999996 69999999999998765 77999
Q ss_pred eCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCC
Q 040133 397 LSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLS 444 (1013)
Q Consensus 397 ~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~ 444 (1013)
++|||||||+|||++|||++++|+ |++++||++|++||++..
T Consensus 220 ~sGTS~AaP~vaG~aAll~~~~p~------lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 220 ISGTSMASPHVAGVAALYLDENPN------LSPAQVTNLLKTRATADK 261 (278)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHHSEESC
T ss_pred eCcHHHHHHHHHHHHHHHHHhCCC------CCHHHHHHHHHHhCccCC
Confidence 999999999999999999999999 999999999999998754
No 30
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=4.2e-47 Score=414.87 Aligned_cols=254 Identities=28% Similarity=0.378 Sum_probs=225.2
Q ss_pred cCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCCCCCCCCCCCcchhhh
Q 040133 163 NCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNEDTLNDNLGHGTFVAG 241 (1013)
Q Consensus 163 ~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~~~~~D~~gHGThVAG 241 (1013)
+.+.+|+++++.+. .+++..+|+.+++|+||+||||||||+.+||+|.+ +...+++.. ....|..||||||||
T Consensus 3 q~~~~W~l~~i~~~-----~~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~-~~~~d~~gHGT~vAg 76 (276)
T 4dzt_A 3 QSPAPWGLDRIDQR-----DLPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGRARVGYDALG-GNGQDCNGHGTHVAG 76 (276)
T ss_dssp ESSCCHHHHHHTSS-----SSSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTCEEEEEETTS-SCSCCSSSHHHHHHH
T ss_pred cCCCCCChhhcCCc-----cCCcccceecCCCCCCcEEEEEccCCCCCChhHccCeeccccCCC-CCCCCCCCCHHHHHH
Confidence 35678999987653 47889999999999999999999999999999985 344455554 445678899999999
Q ss_pred hhhccCCCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhC--CCeEEEecCCCCCCCChHHHHHHHHHhcCCeEE
Q 040133 242 VVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIAT--NIDVLNLSIGGPDYLDLPFIEKIWEITANNIIM 319 (1013)
Q Consensus 242 IIAg~~~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~--gadVINlS~G~~~~~~~~~~~ai~~a~~~GIiv 319 (1013)
+|+|.. .||||+|+|+.+|+++..+....+.++++++|++++ +++|||||||... ...+.+++.++.++|+++
T Consensus 77 iiag~~---~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~--~~~~~~a~~~a~~~gvlv 151 (276)
T 4dzt_A 77 TIGGVT---YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV--STALDNAVKNSIAAGVVY 151 (276)
T ss_dssp HHHCTT---TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC--CHHHHHHHHHHHHTTCEE
T ss_pred HHHccc---cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCC--CHHHHHHHHHHHhCCCEE
Confidence 999874 899999999999999888878899999999999987 9999999999754 567888999999999999
Q ss_pred EEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCC--Ceeee
Q 040133 320 VSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKIST--GCKSL 397 (1013)
Q Consensus 320 VaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~--~y~~~ 397 (1013)
|+||||+|... ...+|+..+++|+|||++.++.++.||++|+ ++||+|||.+|.++...+ .|..+
T Consensus 152 v~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~------------~~dv~ApG~~i~s~~~~~~~~~~~~ 218 (276)
T 4dzt_A 152 AVAAGNDNANA-CNYSPARVAEALTVGATTSSDARASFSNYGS------------CVDLFAPGASIPSAWYTSDTATQTL 218 (276)
T ss_dssp EEECCSSSSBG-GGEETTTCTTSEEEEEECTTSBBCTTCCBST------------TCCEEEECSSEEEECTTSSSCEEEE
T ss_pred EEECCCCCCCC-CCcCcccCCCEEEEEEECCCCCcCCcCCCCC------------CceEEeCCCCeEccccCCCCceEEe
Confidence 99999999753 3346999999999999999999999999996 589999999999998765 78999
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCC
Q 040133 398 SGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGP 446 (1013)
Q Consensus 398 sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~ 446 (1013)
+|||||||+|||++|||++++|+ +++++||++|++||++....
T Consensus 219 sGTS~AaP~vaG~aAll~~~~p~------lt~~~v~~~L~~tA~~~~~~ 261 (276)
T 4dzt_A 219 NGTSMATPHVAGVAALYLEQNPS------ATPASVASAILNGATTGRLS 261 (276)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCTT------CCHHHHHHHHHHHSEESCCB
T ss_pred eEHHHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHhhCcCCccC
Confidence 99999999999999999999999 99999999999999987543
No 31
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=8.9e-47 Score=413.78 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=225.7
Q ss_pred cCCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccc-cccccCCCCCCCCCCCCCcchhhh
Q 040133 163 NCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNI-KERTNWTNEDTLNDNLGHGTFVAG 241 (1013)
Q Consensus 163 ~~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i-~~~~~~~~~~~~~D~~gHGThVAG 241 (1013)
+...+|+++++.+... .....+|+. .+|+||+||||||||+.+||+|.+. ....+|. +...|..+|||||||
T Consensus 3 q~~~~W~l~~i~~~~~----~~~~~~~~~-~~G~gv~VaViDsGvd~~H~~l~~~~~~~~~~~--~~~~d~~gHGT~vAg 75 (279)
T 2pwa_A 3 QTNAPWGLARISSTSP----GTSTYYYDE-SAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYY--YSSRDGNGHGTHCAG 75 (279)
T ss_dssp ETTCCHHHHHHTCSST----TCCCEECCT-TTTTTEEEEEEESCCCTTCGGGTTCEEEEEESS--SCSSCSSSHHHHHHH
T ss_pred CCCCCcChhhcCCCCc----ccccccccC-CCCCCCEEEEEeCCCCCCChhHhCccccccCCC--CCCCCCCCCHHHHHH
Confidence 4567899998765431 222345654 6999999999999999999999853 3455565 346788999999999
Q ss_pred hhhccCCCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCCC-------eEEEecCCCCCCCChHHHHHHHHHhc
Q 040133 242 VVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNI-------DVLNLSIGGPDYLDLPFIEKIWEITA 314 (1013)
Q Consensus 242 IIAg~~~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~ga-------dVINlS~G~~~~~~~~~~~ai~~a~~ 314 (1013)
||+|. ..||||+|+|+.+|++++.+.+..+++++||+|++++++ +|||||||... ...+.+++.++.+
T Consensus 76 iia~~---~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~ai~~a~~ 150 (279)
T 2pwa_A 76 TVGSR---TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGY--SSSVNSAAARLQS 150 (279)
T ss_dssp HHHCT---TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC--CHHHHHHHHHHHH
T ss_pred HHHhc---ccccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCCC--CHHHHHHHHHHHH
Confidence 99987 489999999999999988777888999999999999887 99999999763 4678889999999
Q ss_pred CCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCe
Q 040133 315 NNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGC 394 (1013)
Q Consensus 315 ~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y 394 (1013)
+|+++|+||||+|.+. ...+|+..+++|+|||++.++.++.||++|+ +|||+|||.+|+++...+.|
T Consensus 151 ~gi~vV~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~------------~~di~APG~~i~s~~~~~~~ 217 (279)
T 2pwa_A 151 SGVMVAVAAGNNNADA-RNYSPASEPSVCTVGASDRYDRRSSFSNYGS------------VLDIFGPGTDILSTWIGGST 217 (279)
T ss_dssp TTEEEEEECCSSSSBG-GGEETTTCTTSEEEEEECTTSBBCTTCCBST------------TCCEEEECSSEEEEETTTEE
T ss_pred CCCEEEEECCCCCCcC-CCcCcccCCcEEEEEEecCCCCcCCcCCCCC------------cceEEEecCCeEEeecCCCE
Confidence 9999999999999753 3458999999999999999999999999996 59999999999999999999
Q ss_pred eeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCH
Q 040133 395 KSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDL 458 (1013)
Q Consensus 395 ~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna 458 (1013)
..++|||||||+|||++|||+++ |+ +++++||++|++||++..-. .+|+|.+|+
T Consensus 218 ~~~sGTS~AaP~VaG~aAll~~~-p~------lt~~~v~~~L~~tA~~~~~~---~~~~g~~n~ 271 (279)
T 2pwa_A 218 RSISGTSMATPHVAGLAAYLMTL-GK------TTAASACRYIADTANKGDLS---NIPFGTVNL 271 (279)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHT-TS------CCTTTHHHHHHHHSEESCCB---SCCTTSCCE
T ss_pred EEcCChHHHHHHHHHHHHHHHhC-CC------CCHHHHHHHHHHhCcccccC---CCCCCCccE
Confidence 99999999999999999999999 98 99999999999999886432 357887775
No 32
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=6e-45 Score=457.17 Aligned_cols=441 Identities=22% Similarity=0.268 Sum_probs=298.0
Q ss_pred CcEEEEEcCCCCCCCCCccc---ccccc------cCCC-------CCC----CCCCCCCcchhhhhhhccCC--Cccccc
Q 040133 197 KVKMAIFDTGIRENHPHFRN---IKERT------NWTN-------EDT----LNDNLGHGTFVAGVVAGQDA--ECLGFA 254 (1013)
Q Consensus 197 GV~VaVIDTGId~~Hpdl~~---i~~~~------~~~~-------~~~----~~D~~gHGThVAGIIAg~~~--~~~GVA 254 (1013)
+|+|||||||++.+|.+... +.... ++.+ +++ ..|++||||||||||||..+ ++.|||
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l~~Y~~~~dyg~F~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~N~~g~~GVA 293 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRIGEYSRTHETRNVDDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNHSSRDVDGVA 293 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEEECTTTTCCCCEESSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCCSSSSSCCSC
T ss_pred CEEEEEEeCCCCCCcccccccccccccccccccccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCCCCCCceeec
Confidence 59999999999877766531 11111 1211 111 13668999999999999853 379999
Q ss_pred CCCeEEEEEEecCCCCC--chHHHHHHHHHHHh-----CCCeEEEecCCCCCC--CChHHHHHHHHHh-cCCeEEEEecc
Q 040133 255 PDTEIYAFRVFTDAQVS--YTSWFLDAFNYAIA-----TNIDVLNLSIGGPDY--LDLPFIEKIWEIT-ANNIIMVSAIG 324 (1013)
Q Consensus 255 P~A~I~~vrV~~~~g~~--~~s~il~Ai~~Ai~-----~gadVINlS~G~~~~--~~~~~~~ai~~a~-~~GIivVaAAG 324 (1013)
|+|+|+++|+++..... ..+.++++|.+|++ ++++|||||||+... ....+.+++.++. ++|++||+|||
T Consensus 294 P~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAG 373 (1354)
T 3lxu_X 294 PNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAG 373 (1354)
T ss_dssp TTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECC
T ss_pred CCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCC
Confidence 99999999998765432 44677888888877 799999999998653 2346778888886 89999999999
Q ss_pred CCCCCCCCCCCCCC--CCCceEEeeeecC--------------CCccccCCCCCCccccCCCCCCCcceEEecCCceeee
Q 040133 325 NDGPLYGTLNNPAD--QSDVIGVGGIDYN--------------DHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGS 388 (1013)
Q Consensus 325 N~G~~~~~i~~PA~--~~~VItVGAvd~~--------------g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St 388 (1013)
|+|.+.+++.+|+. .+++|+|||++.. +.+++|||+| |..+++.||||+|||++|.++
T Consensus 374 N~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~~~~~~g~~asFSS~G------Pt~dg~~KpDIaAPG~~I~St 447 (1354)
T 3lxu_X 374 NHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAMREKLPGNVYTWTSRD------PCIDGGQGVTVCAPGGAIASV 447 (1354)
T ss_dssp SCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------CCCCCCCCS------CCSSSSCCEEEEEEC------
T ss_pred CCCCCCCccCCcccccCCceEEEEeecCCCCcccccccccCCCCccccccCCC------CCccCCCcceEEecCceEEEe
Confidence 99998788889996 9999999999865 5788999999 667889999999999999987
Q ss_pred cC--CCCeeeeCCchhHHHHHHHHHHHHHH----hCCCCCcCCCCCHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 040133 389 KI--STGCKSLSGTSVASPVVAGVVCLLVS----VIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESY 462 (1013)
Q Consensus 389 ~~--~~~y~~~sGTSmAAP~VAGvaALLls----~~P~~~~~~~ltp~~VK~~L~~TA~~~~~~~~~~~G~G~lna~~Av 462 (1013)
.. .++|..++|||||||+|||++|||++ .+|+ +++++||++|++||+++...+.+.+|+|+||+.+|+
T Consensus 448 ~~~~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~------LTp~qVk~lL~~TA~~~~~~~~~~~G~GlLDa~~AV 521 (1354)
T 3lxu_X 448 PQFTMSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIE------YSPYSIKRAISVTATKLGYVDPFAQGHGLLNVEKAF 521 (1354)
T ss_dssp ---------CCCCGGGCHHHHHHHHHHHHHHHHHTTCC------CCHHHHHHHHHTTSBCCTTSCTTTSSSSBCCHHHHH
T ss_pred ecCCCCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCC------CCHHHHHHHHHHhCccCCCCCcccccCCEeCHHHHH
Confidence 54 57899999999999999999999987 7888 999999999999999998888888999999999999
Q ss_pred HHHHhcCCCcccCCcccccCC--C--CCCCCcccccccCCCccEEEEEEeecCC-------C------CCeeEEEEEcce
Q 040133 463 EILKNYQPRASIFPSVLDYTD--C--PYSWPFCRQPLYAGAMPVIFNVTILNGW-------E------GNLLNIRFTYSE 525 (1013)
Q Consensus 463 ~~l~~~~p~~~~~p~~l~~~~--~--~~~~p~~~~~~~~g~~pvt~n~ti~n~~-------~------g~~~~v~~s~s~ 525 (1013)
+.++++..... ..+.|.. . ...--+-+.+ ....+.++++++...+ . ...+.+..+.+-
T Consensus 522 ~~a~~~~~~p~---~~v~f~~~v~~~~~rgIylR~~--~~~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~~w 596 (1354)
T 3lxu_X 522 EHLTEHRQSKD---NMLRFSVRVGNNADKGIHLRQG--VQRNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQPW 596 (1354)
T ss_dssp HHHHTTTTCGG---GGEEEEEEETTTTBSSEEECSS--CCCSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESSTT
T ss_pred HHHHhcCCCCc---cceEEEEEecCCCCCceEEecc--ccCCceEEEEEEeeeecCcccCChhhccceEEEEEEecCCCc
Confidence 99999875432 1122210 0 0000000111 1234556666554433 0 122344444444
Q ss_pred eeee-----cccEEEEEEEEcCCCccceeeEEeEEEEEEEcCCCCCCCCCcceeEEEEEEEEEecCCCCCCcce--e---
Q 040133 526 VIWP-----WTGYLALHMQIKEEGAKFSGEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLKVVPTPPRSKRVL--W--- 595 (1013)
Q Consensus 526 v~~p-----~~G~~~v~vtv~~~~~~f~g~~~G~v~~tv~s~~~~~~~~~~~~~~~~~v~v~v~p~p~r~~r~l--~--- 595 (1013)
|..| ..+.-++.|.|++.+.. .|...+.|..-=...+.. .--++|||+|- .|.+....+-. |
T Consensus 597 v~~p~~l~l~~~~r~~~v~vDp~~L~-~G~h~~~v~~~D~~~~~~------gp~f~ipvTv~-~P~~~~~~~~~~~~~~~ 668 (1354)
T 3lxu_X 597 VQCGAFLDLSYGTRSIAVRVDPTGLQ-PGVHSAVIRAYDTDCVQK------GSLFEIPVTVV-QPHVLESDQNTPVFEPA 668 (1354)
T ss_dssp EEECSCEECTTSCEEEEEEECGGGCC-SEEEEEEEEEEESSCTTS------CCSEEEEEEEE-ECBCCCCSSSSCEECCC
T ss_pred eecccceeecCCCceEEEEECCCCCC-CcceeEEEEEEEcCCccc------CceEEeeEEEE-eeeeccCCcCccccccc
Confidence 4444 24455688899998775 477777654332222222 22366666654 34333332221 2
Q ss_pred --eeeeecCCCCCCCcCCCCCCCCCccccC------CCCCCCcHHHHHHHHHHcCeEEEE-cCCccccccCCCceeEEEe
Q 040133 596 --DQFHSIKYPPGYIPRDSLDVRSDILDWH------GDHLHTNFHIMFNMLRDAGYYVET-LGSPFTCFDAHQYGTLMLV 666 (1013)
Q Consensus 596 --dq~h~~~yp~g~~prd~l~~~~~~~d~~------~dh~~tn~~~~~~~l~~~g~~~e~-l~~~~tcf~~~~y~~l~~v 666 (1013)
-.|..+.+-||.|-|.++.++.. -.|- +++-.++= ..-|+|-. -..|.+++....+...+-+
T Consensus 669 ~~~~~~~~~~~pg~i~R~Fi~vP~g-atwa~~~~~~~~~~~~~~--------~~~f~~h~~ql~p~~~~~~~e~~k~~~~ 739 (1354)
T 3lxu_X 669 SSKGDNSVEFQPNTIQRDFILVPER-ATWAELRMRITDPNRGED--------IGKFFVHTNQLLPKQSCRKLETMKIVSV 739 (1354)
T ss_dssp CSSSCCCEEECSSCCEEEEEECCTT-CCEEEEEEEECSSCCTTC--------EEEEEEEEEECCTTCCGGGSEEEEEEEE
T ss_pred ccccccceeccCCceeEEEEeCCCC-CceEEEEEEecCCCCCcc--------cceEEEEeeeccCccccccccceeEeec
Confidence 23667889999999999999843 4443 22211110 13466665 6788898888887777777
Q ss_pred cCCCc
Q 040133 667 DLEDE 671 (1013)
Q Consensus 667 d~e~~ 671 (1013)
.+++|
T Consensus 740 ~~~~~ 744 (1354)
T 3lxu_X 740 GSENE 744 (1354)
T ss_dssp ESSSC
T ss_pred CCCCc
Confidence 66655
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=2.7e-45 Score=401.18 Aligned_cols=249 Identities=24% Similarity=0.386 Sum_probs=218.2
Q ss_pred CCccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCccc-ccccccCCCCCCCCCCCCCcchhhhh
Q 040133 164 CTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRN-IKERTNWTNEDTLNDNLGHGTFVAGV 242 (1013)
Q Consensus 164 ~~~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~-i~~~~~~~~~~~~~D~~gHGThVAGI 242 (1013)
...+|+++++.+.. ......+|+.. +|+||+||||||||+.+||+|.+ +....++.... .|..||||||||+
T Consensus 5 ~~~~W~l~~i~~~~----~~~~~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~--~d~~gHGT~vAgi 77 (279)
T 3f7m_A 5 QGATWGLTRISHRA----RGSTAYAYDTS-AGAGACVYVIDTGVEDTHPDFEGRAKQIKSYASTA--RDGHGHGTHCAGT 77 (279)
T ss_dssp TTCCHHHHHHTCSS----SCCCSEEECTT-TTTTEEEEEEESCCCTTCGGGTTCEEEEEECSSSS--SCSSSHHHHHHHH
T ss_pred CCCCCCHhhcCCCC----CCCcceeecCC-CCCCCEEEEEcCCCCCCChhhccccccccCCCCCC--CCCCCcHHHHHHH
Confidence 45789999886543 23455788887 99999999999999999999985 34444554433 3889999999999
Q ss_pred hhccCCCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhCC-------CeEEEecCCCCCCCChHHHHHHHHHhcC
Q 040133 243 VAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATN-------IDVLNLSIGGPDYLDLPFIEKIWEITAN 315 (1013)
Q Consensus 243 IAg~~~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~g-------adVINlS~G~~~~~~~~~~~ai~~a~~~ 315 (1013)
|+|.. .||||+|+|+.+|+++..+.+..+.+++|++|+++++ ++|||||||.. ....+.+++.++.++
T Consensus 78 i~~~~---~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~--~~~~~~~a~~~a~~~ 152 (279)
T 3f7m_A 78 IGSKT---WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG--YSAALNQAAARLQSS 152 (279)
T ss_dssp HHCTT---TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE--CCHHHHHHHHHHHHT
T ss_pred HhcCc---cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC--ccHHHHHHHHHHHHC
Confidence 99864 8999999999999998887788999999999999875 99999999976 356788899999999
Q ss_pred CeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccccCCCCCCccccCCCCCCCcceEEecCCceeeecCCCCee
Q 040133 316 NIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCK 395 (1013)
Q Consensus 316 GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~fSs~G~st~~~P~~~G~~KpDI~APG~~I~St~~~~~y~ 395 (1013)
|+++|+||||+|.+. ...+|+..+++|+|||++.++.++.||++|+ ++||+|||.+|.++..++.|.
T Consensus 153 gv~vV~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~------------~~di~ApG~~i~s~~~~~~~~ 219 (279)
T 3f7m_A 153 GVFVAVAAGNDNRDA-ANTSPASEPTVCTVGATDSNDVRSTFSNYGR------------VVDIFAPGTSITSTWIGGRTN 219 (279)
T ss_dssp TCEEEEECCSSSSBG-GGEETTTCTTSEEEEEECTTSBBCTTCCBST------------TCCEEEECSSEEEECGGGCEE
T ss_pred CCEEEEEcCCCCCCC-CCcCCCCCCCEEEEeecCCCCCCCCCCCCCC------------CCeEEECCCCeEeecCCCCEE
Confidence 999999999999753 3347999999999999999999999999996 699999999999999999999
Q ss_pred eeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCC
Q 040133 396 SLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLS 444 (1013)
Q Consensus 396 ~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~ 444 (1013)
.++|||||||+|||++|||++++|+ ++++||++|++||++..
T Consensus 220 ~~sGTS~AaP~vaG~aAll~~~~p~-------t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 220 TISGTSMATPHIAGLAAYLFGLEGG-------SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHTCC-------CTTTHHHHHHHHSEESC
T ss_pred EeeEHHHHHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHhccccc
Confidence 9999999999999999999999985 88999999999998753
No 34
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.4e-44 Score=424.82 Aligned_cols=248 Identities=26% Similarity=0.335 Sum_probs=207.9
Q ss_pred ccccccccccccccccccCchhhhhCCCCCCCcEEEEEcCCCCCCCCCcccccccccC--C-CC------CCCCCCCCCc
Q 040133 166 INWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKERTNW--T-NE------DTLNDNLGHG 236 (1013)
Q Consensus 166 ~~W~l~~~~~~~~~~~~i~a~~aW~~g~tG~GV~VaVIDTGId~~Hpdl~~i~~~~~~--~-~~------~~~~D~~gHG 236 (1013)
.+|+++++.++.. . ..+|..+++|+||+||||||||+.+||+|.+.....+| . .. ....|..|||
T Consensus 2 ~~WgL~rI~~~~~-----~-~~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~~~~~~~~v~~~dg~~f~~~~~D~~GHG 75 (546)
T 2qtw_B 2 IPWNLERITPPRY-----R-ADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVMVTDFENVPEEDGTRFHRQASKCDSHG 75 (546)
T ss_dssp CCHHHHHTSCSSC-----C---------CCTTSEEEEEESCCCTTSTTTTTTEEEEEEECCCCCC-------CTTTTHHH
T ss_pred CCCChhhcCCCcc-----c-chhcccCCCCCCcEEEEECCCCCCCChHHcccccccCcccccCCCCccccCCCCCCCChH
Confidence 5799999876531 1 24899999999999999999999999999964322122 1 11 2345788999
Q ss_pred chhhhhhhccCCCcccccCCCeEEEEEEecCCCCCchHHHHHHHHHHHhC------CCeEEEecCCCCCCCChHHHHHHH
Q 040133 237 TFVAGVVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIAT------NIDVLNLSIGGPDYLDLPFIEKIW 310 (1013)
Q Consensus 237 ThVAGIIAg~~~~~~GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~~------gadVINlS~G~~~~~~~~~~~ai~ 310 (1013)
|||||||+|.. .||||+|+|+++|+++..+.+..+.+++||+|++++ +++|||||||+.. ...+.+++.
T Consensus 76 ThVAGIIag~~---~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~~--s~~l~~Ai~ 150 (546)
T 2qtw_B 76 THLAGVVSGRD---AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY--SRVLNAACQ 150 (546)
T ss_dssp HHHHHHHHCTT---TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEEC--CHHHHHHHH
T ss_pred HHHHHHHhccC---CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCCC--cHHHHHHHH
Confidence 99999999875 899999999999999888778889999999999974 8999999999753 567888999
Q ss_pred HHhcCCeEEEEeccCCCCCCCCCCCCCCCCCceEEeeeecCCCccc----cCCCCCCccccCCCCCCCcceEEecCCcee
Q 040133 311 EITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIAS----FSSRGMSTWEIPHGYGRVKPDVVAYGREIM 386 (1013)
Q Consensus 311 ~a~~~GIivVaAAGN~G~~~~~i~~PA~~~~VItVGAvd~~g~~a~----fSs~G~st~~~P~~~G~~KpDI~APG~~I~ 386 (1013)
++.++|++||+||||+|.+ ....+|+..+++|+|||++.++.++. |||+|+ +|||+|||.+|+
T Consensus 151 ~A~~~GvlvVaAAGN~g~d-~~~~sPAs~~~VItVGA~d~~g~~a~~s~~fSn~G~------------~vDI~APG~~I~ 217 (546)
T 2qtw_B 151 RLARAGVVLVTAAGNFRDD-ACLYSPASAPEVITVGATNAQDQPVTLGTLGTNFGR------------CVDLFAPGEDII 217 (546)
T ss_dssp HHHHTTCEEEEECCSBSSB-GGGEETTTCTTSEEEEEECTTSCBCEETTEECCBST------------TCCEEEECSSEE
T ss_pred HHHhCCCEEEEECCCCCCC-CCccCcccCCCEEEEEEecCCCCcccccCCcCCCCC------------cceEEecCccEE
Confidence 9999999999999999975 24567999999999999999999988 888885 799999999999
Q ss_pred eecCC--CCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccC
Q 040133 387 GSKIS--TGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKL 443 (1013)
Q Consensus 387 St~~~--~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~ 443 (1013)
++... +.|..++|||||||+|||++|||++++|+ +++++||++|++||.+.
T Consensus 218 St~~~~~~~y~~~SGTSmAAP~VAG~aALlls~~P~------ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 218 GASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEPE------LTLAELRQRLIHFSAKD 270 (546)
T ss_dssp EECTTSTTCEEEECSHHHHHHHHHHHHHHHHHHSTT------CCHHHHHHHHHHTSEES
T ss_pred eeccCCCCcEeeeCcCcHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHHhcccc
Confidence 99886 56899999999999999999999999999 99999999999999764
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.93 E-value=4.5e-26 Score=271.00 Aligned_cols=266 Identities=19% Similarity=0.221 Sum_probs=178.5
Q ss_pred CCCCCCcEEEEEcCCCCCCCCCcccccccccCCCC-------CC-CCCCCCCcchhhhhhhccC-CCcccccCCCeEEEE
Q 040133 192 GYTGAKVKMAIFDTGIRENHPHFRNIKERTNWTNE-------DT-LNDNLGHGTFVAGVVAGQD-AECLGFAPDTEIYAF 262 (1013)
Q Consensus 192 g~tG~GV~VaVIDTGId~~Hpdl~~i~~~~~~~~~-------~~-~~D~~gHGThVAGIIAg~~-~~~~GVAP~A~I~~v 262 (1013)
+++|+|++|||||+|.++.|+||............ +. ..+..++.++ +++.+.-+ ..+.||||+|+|+.+
T Consensus 208 ~~~G~g~tIaIid~g~~~~~~DL~~f~~~~g~~~~~~~~v~~~g~~~~~~~~~~~-~~~Ea~LDv~~~~gvAp~a~i~~~ 286 (552)
T 1t1e_A 208 GLDGQGQCIAIIELGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNG-PDGEVELDIEVAGALAPGAKIAVY 286 (552)
T ss_dssp SCCCTTCEEEEEESSCCCCHHHHHHHHHHHTCCCCCEEEEESTTCCCCCCSCTTS-HHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCCCeEEEEEeCCCCCCHHHHHHHHHHcCCCCCceEEEecCCCCCCCCCCCCC-CceeeecchhhhhccCCCCeEEEE
Confidence 56899999999999999999998743222111100 10 1111111122 23333222 125899999999999
Q ss_pred EEecCCCCCchHHHHHHHHHHHh---CCCeEEEecCCCCCCC-C----hHHHHHHHHHhcCCeEEEEeccCCCCCC----
Q 040133 263 RVFTDAQVSYTSWFLDAFNYAIA---TNIDVLNLSIGGPDYL-D----LPFIEKIWEITANNIIMVSAIGNDGPLY---- 330 (1013)
Q Consensus 263 rV~~~~g~~~~s~il~Ai~~Ai~---~gadVINlS~G~~~~~-~----~~~~~ai~~a~~~GIivVaAAGN~G~~~---- 330 (1013)
++.+ ..+.++++|+||++ ++++|||+|||..... . ..+..++.++.++||+||+||||+|...
T Consensus 287 ~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~AsGd~G~~~~~~~ 361 (552)
T 1t1e_A 287 FAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAAAGDSGSTDGEQD 361 (552)
T ss_dssp ECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSBGGGTTCCS
T ss_pred EcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCC
Confidence 9732 35679999999998 7999999999986432 1 2455667778889999999999999643
Q ss_pred --CCCCCCCCCCCceEEeeeecCC-------Ccc------------ccCCCCCCc-ccc----C------CCCCCCcceE
Q 040133 331 --GTLNNPADQSDVIGVGGIDYND-------HIA------------SFSSRGMST-WEI----P------HGYGRVKPDV 378 (1013)
Q Consensus 331 --~~i~~PA~~~~VItVGAvd~~g-------~~a------------~fSs~G~st-~~~----P------~~~G~~KpDI 378 (1013)
..+.+||++|+||+|||++... ..+ .||++.+.. |.. | ...||.+|||
T Consensus 362 ~~~~~~~PAs~P~V~aVGat~~~~~~~~~~~e~aw~~~~~~~~sgGGfS~~~~~P~yQ~~~~~~~~~~~~~~~gR~~PDV 441 (552)
T 1t1e_A 362 GLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSANPGAGSGRGVPDV 441 (552)
T ss_dssp SSCCCEETTTSTTSEEEEEEEEEEETTEEEEEEECBCHHHHCBCCCEECSSSCCCTTTTTSCCCCCSSTTCCCCCEECSE
T ss_pred CcccccCcccCCCEEEEecccccCCCCCccceeeeccCCCCccCCCCCCCCCCCcchhhcccccccccccCcCCCCCCce
Confidence 3578999999999999998643 222 466665421 111 1 2368999999
Q ss_pred EecC---CceeeecCCCCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHhccccCCC-C--------
Q 040133 379 VAYG---REIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSG-P-------- 446 (1013)
Q Consensus 379 ~APG---~~I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~TA~~~~~-~-------- 446 (1013)
+||| .+ +....++.|...+|||||||+|||++|||+++.+. .-..++|..-+ +-...-.++.. .
T Consensus 442 sA~a~p~~~-~~v~~~g~~~~~~GTS~AaP~vAGv~ALl~~~~g~--~lG~~np~LY~-~~~~~f~Dit~G~n~~~~~~~ 517 (552)
T 1t1e_A 442 AGNADPATG-YEVVIDGETTVIGGTAAVAPLFAALVARINQKLGK--PVGYLNPTLYQ-LPPEVFHDITEGNNDIANRAR 517 (552)
T ss_dssp EEECCGGGC-EEEEETTEEEEEESGGGHHHHHHHHHHHHHHHHTS--CCCCCHHHHTT-SCGGGEECCCSCBCCCSSSSC
T ss_pred ecccCCCCC-eEEEeCCeEEeccccchhhHHHHHHHHHHhhhccC--CCCCccHHHHh-cCccceeecccCCCCCcCCCC
Confidence 9995 34 34456788999999999999999999999998653 22335554332 10000111110 0
Q ss_pred -------CCCCccccccCHHHHHHHHHh
Q 040133 447 -------NMYEQGAGRVDLLESYEILKN 467 (1013)
Q Consensus 447 -------~~~~~G~G~lna~~Av~~l~~ 467 (1013)
-+...|+|.+|..+++++++.
T Consensus 518 ~~~a~~GwD~~TGlGtpn~~~l~~~~~~ 545 (552)
T 1t1e_A 518 IYQAGPGWDPCTGLGSPIGIRLLQALLP 545 (552)
T ss_dssp CSBCCSSCBTTTBTCEECHHHHHHHHCC
T ss_pred CcCCCCCCCCCccccccCHHHHHHHHhh
Confidence 012359999999999987764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=4.7e-21 Score=217.89 Aligned_cols=213 Identities=19% Similarity=0.217 Sum_probs=152.8
Q ss_pred cccCCCeEEEEEEecCCCCCchHHHHHHHHHHHh-CCCeEEEecCCCCCCC------ChHHHHHHHHHhcCCeEEEEecc
Q 040133 252 GFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIA-TNIDVLNLSIGGPDYL------DLPFIEKIWEITANNIIMVSAIG 324 (1013)
Q Consensus 252 GVAP~A~I~~vrV~~~~g~~~~s~il~Ai~~Ai~-~gadVINlS~G~~~~~------~~~~~~ai~~a~~~GIivVaAAG 324 (1013)
.+||+++++.+++.+... ...+.++++|+||++ ++++|||+|||..... ...+.+++.++.++||+||+|||
T Consensus 91 ~~aP~a~~~~~~~~~~~~-~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 91 SAGGAVQQLLFYMADQSA-SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HTTSCEEEEEEEEECTTS-STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hcCCCCcEEEEEeCCCCC-cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 468999999999986532 456789999999997 8999999999975421 13456677778889999999999
Q ss_pred CCCCCC-----------CCCCCCCCCCCceEEeeeecCCC--------c----------------cccCCCCCCc-ccc-
Q 040133 325 NDGPLY-----------GTLNNPADQSDVIGVGGIDYNDH--------I----------------ASFSSRGMST-WEI- 367 (1013)
Q Consensus 325 N~G~~~-----------~~i~~PA~~~~VItVGAvd~~g~--------~----------------a~fSs~G~st-~~~- 367 (1013)
|+|... ..+.+|+++|+||+|||++.... . ..||++++.. |..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~~~~~~~~~~e~~~~~~~~~~~~~~~sgGGfS~~~~~P~yQ~~ 249 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPSWQSV 249 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEEECCGGGGG
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeeccCCCCccccceeeeccccccccccccCCCCcCCCCCCcccccc
Confidence 999742 24678999999999999986421 1 2356655321 110
Q ss_pred --CCCCCCCcceEE---ecCCceeeecCCCCeeeeCCchhHHHHHHHHHHHHHHhCCCCCcCCCCCHHHHHHHHHh-c-c
Q 040133 368 --PHGYGRVKPDVV---AYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVE-G-A 440 (1013)
Q Consensus 368 --P~~~G~~KpDI~---APG~~I~St~~~~~y~~~sGTSmAAP~VAGvaALLls~~P~~~~~~~ltp~~VK~~L~~-T-A 440 (1013)
....+|.+|||+ |||.++... ..+.+...+|||||||+|||++|||+++.+. .-..++|..-+..-.. . -
T Consensus 250 ~~~~~~gR~~PDVsa~aapg~~~~~~-~~g~~~~~~GTS~AaP~vAGi~ALl~~~~~~--~lG~~np~LY~~a~~~~~~f 326 (372)
T 1ga6_A 250 VSGTPGRRLLPDISFDAAQGTGALIY-NYGQLQQIGGTSLASPIFVGLWARLQSANSN--SLGFPAASFYSAISSTPSLV 326 (372)
T ss_dssp STTSCSEEEECSEEEECCGGGCEEEE-ETTEEEEECSHHHHHHHHHHHHHHHHHHTTT--CCCCCHHHHHHHHHHCGGGE
T ss_pred cccCCCCccCCceecccCCCCCEEEE-eCCcEEeccccchHHHHHHHHHHHHHhcCCC--CcCccCHHHHhhcccCCcce
Confidence 012468899999 899887654 4677889999999999999999999998764 2234666554422111 1 1
Q ss_pred ccCCC-CC-------------CCCccccccCHHHHHHHHHhc
Q 040133 441 AKLSG-PN-------------MYEQGAGRVDLLESYEILKNY 468 (1013)
Q Consensus 441 ~~~~~-~~-------------~~~~G~G~lna~~Av~~l~~~ 468 (1013)
.++.. .+ +...|+|.+|..++++++++.
T Consensus 327 ~Dit~G~n~~~~~g~~a~~GwD~~TGlGtpn~~~l~~~~~~~ 368 (372)
T 1ga6_A 327 HDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSN 368 (372)
T ss_dssp ECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHHHHHHH
T ss_pred eecccCCCCCCCCCCCCCCCCCCCccCchhhHHHHHHHHhhc
Confidence 22211 00 123599999999999988764
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.12 E-value=9.1e-11 Score=139.24 Aligned_cols=144 Identities=24% Similarity=0.336 Sum_probs=97.1
Q ss_pred HHHHHHHHHH--hCCCeEEEecCCCCCC-CCh----HHHHHHHHHhcCCeEEEEeccCCCCCCC--------CCCCCCCC
Q 040133 275 WFLDAFNYAI--ATNIDVLNLSIGGPDY-LDL----PFIEKIWEITANNIIMVSAIGNDGPLYG--------TLNNPADQ 339 (1013)
Q Consensus 275 ~il~Ai~~Ai--~~gadVINlS~G~~~~-~~~----~~~~ai~~a~~~GIivVaAAGN~G~~~~--------~i~~PA~~ 339 (1013)
.+++.+.+.. .+.++||++|||.... ... .+...+.++..+||.|++|+||+|..+. ...+||++
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~ 363 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASS 363 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTC
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCC
Confidence 3444444433 3568899999998642 222 2345566788899999999999997432 35789999
Q ss_pred CCceEEeeeecCC------Ccccc-CCCCCCc------cc-------------cCC-----CCCCCcceEEecCCceeee
Q 040133 340 SDVIGVGGIDYND------HIASF-SSRGMST------WE-------------IPH-----GYGRVKPDVVAYGREIMGS 388 (1013)
Q Consensus 340 ~~VItVGAvd~~g------~~a~f-Ss~G~st------~~-------------~P~-----~~G~~KpDI~APG~~I~St 388 (1013)
|.|++||+++-.. ..+.+ |.-|-+. |. .|. ..||..|||+|.|.+....
T Consensus 364 P~VtaVGgT~l~~~~~~~~e~~~~~sgGGfS~~f~~P~yQ~~~v~~yl~~~~~~~~~~~~n~~gR~~PDVaa~~~~~~v~ 443 (544)
T 3edy_A 364 PYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPSYQEEAVTKFLSSSPHLPPSSYFNASGRAYPDVAALSDGYWVV 443 (544)
T ss_dssp TTSEEEEEEEESSSSCCCCEEECTTCCCEEEEEEECCGGGHHHHHHHHHHCSSCCCGGGSCTTEEEECSEEEECSSEEEE
T ss_pred CcEEEEeeeeccCCCcccccceeecCCCccCCCCCCChhHHHHHHHHHhccCCCCcccccccCCCcCCCeecccCCEEEE
Confidence 9999999997531 12222 2222110 10 011 3578999999999986544
Q ss_pred cCCCCeeeeCCchhHHHHHHHHHHHHHHhC
Q 040133 389 KISTGCKSLSGTSVASPVVAGVVCLLVSVI 418 (1013)
Q Consensus 389 ~~~~~y~~~sGTSmAAP~VAGvaALLls~~ 418 (1013)
..+......+|||+|||++||++||+.++.
T Consensus 444 ~~g~~~~~~gGTS~aaP~~A~~~al~n~~r 473 (544)
T 3edy_A 444 SNRVPIPWVSGTSASTPVFGGILSLINEHR 473 (544)
T ss_dssp ETTEEEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred ECCeeeeeecCcccchhHHHHHHHHHHHHH
Confidence 322223358999999999999999998863
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=97.77 E-value=3.8e-05 Score=68.04 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=47.9
Q ss_pred cccCCcEEEEeCCCCChHHHHHHHHhhcCCCCCchhhccCCCccccceeeeEEecccccHHHHHHHHcCCCceEEEeCce
Q 040133 46 RISRNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVSVDSS 125 (1013)
Q Consensus 46 ~~v~~~yIV~fk~~~~~~~~~~~l~~~~~~~~~~~v~r~~~~~~~~~~f~v~~v~~~~~~~~i~~L~~~P~V~~Vepd~~ 125 (1013)
..++++|||+||++.+.+...+.+.. ..+.++.. .|.. |. ++.+..+++.+++|+++|+|++||||..
T Consensus 5 ~~i~~~YIV~~k~~~~~~~~~~~~~~---~~g~~i~~------~y~~-~~--Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~ 72 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCAKKEDVIS---EKGGKLQK------CFKY-VD--AASATLNEKAVEELKKDPSVAYVEEDKL 72 (80)
T ss_dssp ---CCEEEEEECTTCCSHHHHHHHHH---TTTCEEEE------ECSS-SS--EEEEECCHHHHHHHHTCTTEEEEEECCE
T ss_pred ccCCCCEEEEECCCCChHHHHHHHHH---HcCCcceE------EEcc-cE--EEEEEcCHHHHHHHHhCCCccEEEeCcE
Confidence 45789999999999887553322221 22222222 2333 44 4455677889999999999999999999
Q ss_pred eeecc
Q 040133 126 YKRGL 130 (1013)
Q Consensus 126 ~~~~~ 130 (1013)
++...
T Consensus 73 v~~~t 77 (80)
T 3cnq_P 73 YRALS 77 (80)
T ss_dssp EEECC
T ss_pred EEEee
Confidence 98743
No 39
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=97.69 E-value=1.7e-05 Score=76.66 Aligned_cols=80 Identities=15% Similarity=-0.032 Sum_probs=51.5
Q ss_pred cCcccCCcEEEEeCCCCChHHHHHHHHhhcCCCCCchhhc--cCCCccccceeeeEEecccccHHHHHHHHcCCCceEEE
Q 040133 44 QTRISRNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIER--KNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVS 121 (1013)
Q Consensus 44 ~~~~v~~~yIV~fk~~~~~~~~~~~l~~~~~~~~~~~v~r--~~~~~~~~~~f~v~~v~~~~~~~~i~~L~~~P~V~~Ve 121 (1013)
....+|++|||+||++.+.+.+...++.... ...+ .+....+.+...+.++.+..+++.+++|+++|+|.+||
T Consensus 42 ~~~~Ip~~YIV~~K~~~~~~~~~~~~~~l~~-----~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE 116 (124)
T 2qtw_A 42 DPWRLPGTYVVVLKEETHLSQSERTARRLQA-----QAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIE 116 (124)
T ss_dssp GGGEEEEEEEEEECTTCCHHHHHHHHHHHHH-----HHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEE
T ss_pred cccCCCCCEEEEECCCCCHHHHHHHHHHHHH-----HHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEE
Confidence 3567999999999999887665543332111 0011 11112222222234556677788899999999999999
Q ss_pred eCceeee
Q 040133 122 VDSSYKR 128 (1013)
Q Consensus 122 pd~~~~~ 128 (1013)
||..++.
T Consensus 117 ~D~~v~a 123 (124)
T 2qtw_A 117 EDSSVFA 123 (124)
T ss_dssp EEEEEEE
T ss_pred eCceEec
Confidence 9998864
No 40
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=97.35 E-value=0.0001 Score=70.13 Aligned_cols=80 Identities=16% Similarity=0.041 Sum_probs=53.0
Q ss_pred CcCcccCCcEEEEeCCCCChH---HHHHHHHhhcCCCCCchhhccCCCccccceeeeEEecccccHHHHHHHHcCCCceE
Q 040133 43 NQTRISRNNYIVRFREYKTAE---DHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKD 119 (1013)
Q Consensus 43 ~~~~~v~~~yIV~fk~~~~~~---~~~~~l~~~~~~~~~~~v~r~~~~~~~~~~f~v~~v~~~~~~~~i~~L~~~P~V~~ 119 (1013)
.....++++|||.|+++.+.+ .+.+++.+.+++.. ......+.+...+.++.+.++++.+++|+++|+|++
T Consensus 31 ~~~~~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~~------~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~ 104 (114)
T 2w2n_P 31 KDPWRLPGTYVVVLKEETHLSQSERTARRLQAQAARRG------YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDY 104 (114)
T ss_dssp SGGGEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT------CCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEE
T ss_pred CCccCCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhcc------cCCceEEEecccceEEEEEcCHHHHHHHHcCCCccE
Confidence 345678999999999987753 44556666443210 111122222222335566777888999999999999
Q ss_pred EEeCceeee
Q 040133 120 VSVDSSYKR 128 (1013)
Q Consensus 120 Vepd~~~~~ 128 (1013)
||||+.++.
T Consensus 105 VE~D~~v~~ 113 (114)
T 2w2n_P 105 IEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEE
T ss_pred EEeCceEec
Confidence 999998864
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.11 E-value=0.00088 Score=59.03 Aligned_cols=67 Identities=13% Similarity=0.258 Sum_probs=46.1
Q ss_pred CcEEEEeCCCCChHHHHH---HHHhhcCCCCCchhhccCCCcccc-ceeeeEEecccccHHHHHHHHcC--CCceEEEeC
Q 040133 50 NNYIVRFREYKTAEDHCS---YLKSRITPDGWKWIERKNPASKYP-TDFGLISVEESAKQGLIEEIERL--NLVKDVSVD 123 (1013)
Q Consensus 50 ~~yIV~fk~~~~~~~~~~---~l~~~~~~~~~~~v~r~~~~~~~~-~~f~v~~v~~~~~~~~i~~L~~~--P~V~~Vepd 123 (1013)
++|||.||++.+.+.... ++.+. +.+ ....|. . .+.++.+..+++.+++|+++ |.|++||+|
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~~----gg~------i~~~y~~~--~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIAE----GGT------ITNEYNMP--GMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHH----TCC------CCEEEEET--TEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHhh----CCc------eEEEEEcC--ceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 789999999988765443 33332 111 111231 2 23456677889999999999 899999999
Q ss_pred ceeee
Q 040133 124 SSYKR 128 (1013)
Q Consensus 124 ~~~~~ 128 (1013)
..++.
T Consensus 71 ~~v~~ 75 (76)
T 1v5i_B 71 HVAHA 75 (76)
T ss_dssp CEEEC
T ss_pred cEEeC
Confidence 98763
No 42
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=92.50 E-value=0.041 Score=46.88 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=37.5
Q ss_pred CcEEEEeCCCCChHHHHHHHHhhcCCCCCchhhccCCCccccceeeeEEecccccHHHHHHHHcCCCceEEEeCceeee
Q 040133 50 NNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVSVDSSYKR 128 (1013)
Q Consensus 50 ~~yIV~fk~~~~~~~~~~~l~~~~~~~~~~~v~r~~~~~~~~~~f~v~~v~~~~~~~~i~~L~~~P~V~~Vepd~~~~~ 128 (1013)
.+|||.|+++.. ..+.+...|.++..+.. .+..+.+ ..+++.+++|+++|+|++||+|..++.
T Consensus 2 ~~~IV~f~~~~~-------~~~~i~~~gG~i~~~~~-------~I~a~~~--~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 2 IRVIVSVDKAKF-------NPHEVLGIGGHIVYQFK-------LIPAVVV--DVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp EEEEEEECGGGC-------CGGGGGGGTCEEEEECS-------SSSEEEE--EECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred eeEEEEEcCcch-------hHHHHHHCCCEEEEEec-------CCcEEEE--EeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 479999988511 12233333444433322 1223322 333455789999999999999988753
No 43
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=77.79 E-value=0.98 Score=58.55 Aligned_cols=24 Identities=33% Similarity=0.675 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEEcCCCCCCCCCcc
Q 040133 192 GYTGAKVKMAIFDTGIRENHPHFR 215 (1013)
Q Consensus 192 g~tG~GV~VaVIDTGId~~Hpdl~ 215 (1013)
.++|+||+|||+|||||..+|.|+
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 579999999999999999999995
No 44
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=76.64 E-value=3.5 Score=44.41 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=55.0
Q ss_pred CCCcHHHHHHHHHHcCeEEEEcCCcc---ccccCCCceeEEEecCCC-cCCHHHHHHHHHHHhhCCCcEEEEeee
Q 040133 627 LHTNFHIMFNMLRDAGYYVETLGSPF---TCFDAHQYGTLMLVDLED-EYFEEEIEKLSYDVLNTGLGLAVFSEW 697 (1013)
Q Consensus 627 ~~tn~~~~~~~l~~~g~~~e~l~~~~---tcf~~~~y~~l~~vd~e~-~~~~~e~~~l~~~v~~~~l~~~v~~dw 697 (1013)
++.--..+-..|++.||-|+++...- +--++++|-++++.|..- .+.++++++|++.|+ +|-+||+++..
T Consensus 15 ~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~-~GGgLi~~gG~ 88 (259)
T 3rht_A 15 LETAAGYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILSDYPAERMTAQAIDQLVTMVK-AGCGLVMLGGW 88 (259)
T ss_dssp TTTTHHHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHH-TTCEEEEECST
T ss_pred chhHHHHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHH-hCCeEEEecCc
Confidence 33444556678999999999976542 223668999999999764 688999999999996 59999999764
No 45
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=61.15 E-value=2.9 Score=44.64 Aligned_cols=68 Identities=18% Similarity=0.368 Sum_probs=52.7
Q ss_pred CCcHHHHHHHHHHcCeEEEEc-------CCccccccCCCceeEEEecCC-CcCC------------HHHHHHHHHHHhhC
Q 040133 628 HTNFHIMFNMLRDAGYYVETL-------GSPFTCFDAHQYGTLMLVDLE-DEYF------------EEEIEKLSYDVLNT 687 (1013)
Q Consensus 628 ~tn~~~~~~~l~~~g~~~e~l-------~~~~tcf~~~~y~~l~~vd~e-~~~~------------~~e~~~l~~~v~~~ 687 (1013)
|...+.+.+.|+.+|+-|+++ .-|.+--++.+|..+++.|.. ..|. ++..+.|++.|++
T Consensus 39 ~~~~~~l~~aL~~~~~~v~~~~~~~~~~~fp~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~- 117 (256)
T 2gk3_A 39 EEGATWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKN- 117 (256)
T ss_dssp EESCHHHHHHHHHTTCEEEEECHHHHHHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHT-
T ss_pred cccHHHHHHHHHhcCceEEEEecccchhhCCcChhHHhcCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHHh-
Confidence 444567889999999999998 444332357899999999854 3444 7889999999976
Q ss_pred CCcEEEEee
Q 040133 688 GLGLAVFSE 696 (1013)
Q Consensus 688 ~l~~~v~~d 696 (1013)
|-+||+++.
T Consensus 118 GGgll~igG 126 (256)
T 2gk3_A 118 GGGLLMIGG 126 (256)
T ss_dssp TCEEEEECS
T ss_pred CCEEEEECC
Confidence 999999987
No 46
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=53.72 E-value=20 Score=38.17 Aligned_cols=61 Identities=25% Similarity=0.370 Sum_probs=49.7
Q ss_pred HHHHHHHHcCeEEEEcC--Ccccccc---CCCceeEEEe-c-CCCcCCHHHHHHHHHHHhhCCCcEEEE
Q 040133 633 IMFNMLRDAGYYVETLG--SPFTCFD---AHQYGTLMLV-D-LEDEYFEEEIEKLSYDVLNTGLGLAVF 694 (1013)
Q Consensus 633 ~~~~~l~~~g~~~e~l~--~~~tcf~---~~~y~~l~~v-d-~e~~~~~~e~~~l~~~v~~~~l~~~v~ 694 (1013)
.|-+.|++.||-|++.. ++-..|| +.+|-+|++. | ...++.++..+.|++.| ++|-++|++
T Consensus 36 ~i~~~L~~~gf~V~~~t~dd~~~~~~~~~L~~~DvvV~~~~~~~~~l~~~~~~al~~~V-~~GgG~vgi 103 (252)
T 1t0b_A 36 VIASYLAEAGFDAATAVLDEPEHGLTDEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRV-LEGMGLIVL 103 (252)
T ss_dssp HHHHHHHHTTCEEEEEESSSGGGGCCHHHHHTCSEEEEECSSCGGGSCHHHHHHHHHHH-HTTCEEEEE
T ss_pred HHHHHHhhCCcEEEEEeccCccccCCHhHHhcCCEEEEecCCCCCcCCHHHHHHHHHHH-HcCCCEEEE
Confidence 34677889999999976 7766665 6799999986 2 55678999999999999 569999998
No 47
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=50.26 E-value=36 Score=36.78 Aligned_cols=63 Identities=25% Similarity=0.404 Sum_probs=48.3
Q ss_pred HHHHHHHHHcC-eEEEEcCCc-----cccc--cCCCceeEEEecCCCcCCHHHHHHHHHHHhhCCCcEEEEe
Q 040133 632 HIMFNMLRDAG-YYVETLGSP-----FTCF--DAHQYGTLMLVDLEDEYFEEEIEKLSYDVLNTGLGLAVFS 695 (1013)
Q Consensus 632 ~~~~~~l~~~g-~~~e~l~~~-----~tcf--~~~~y~~l~~vd~e~~~~~~e~~~l~~~v~~~~l~~~v~~ 695 (1013)
..|-..|++.| |-|++...| ...| ++.+|-+|++--.-+.+.++..+.|++.|++ |-++|++-
T Consensus 23 ~~l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~~~~~l~~~~~~~l~~yV~~-Ggglv~~H 93 (281)
T 4e5v_A 23 VVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDYNGDSWPEETNRRFLEYVQN-GGGVVIYH 93 (281)
T ss_dssp HHHHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECCCSSCCCHHHHHHHHHHHHT-TCEEEEEG
T ss_pred HHHHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeCCCCcCCHHHHHHHHHHHHc-CCCEEEEe
Confidence 45666777888 999997543 2455 6788999986444477889999999999955 88999874
No 48
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.30 E-value=24 Score=32.04 Aligned_cols=102 Identities=19% Similarity=0.168 Sum_probs=63.0
Q ss_pred CCcccCCcccccCCCCCCCCcc--cccccCCCccEEEEEEeecCCCCCeeEEEEEcceeeeecccEEEEEEEEcCCCccc
Q 040133 470 PRASIFPSVLDYTDCPYSWPFC--RQPLYAGAMPVIFNVTILNGWEGNLLNIRFTYSEVIWPWTGYLALHMQIKEEGAKF 547 (1013)
Q Consensus 470 p~~~~~p~~l~~~~~~~~~p~~--~~~~~~g~~pvt~n~ti~n~~~g~~~~v~~s~s~v~~p~~G~~~v~vtv~~~~~~f 547 (1013)
|...+....+||+.+.+.-+.. -...+.|..|+.+++.. . .......++++++.-.+++++...|.|+..+...
T Consensus 8 P~i~~~~~~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~-~-~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~-- 83 (112)
T 2e6j_A 8 PKIHFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTP-P-TSALGACFVFSPKEGIIEPSGVQAIQISFSSIIL-- 83 (112)
T ss_dssp CSEEESCSEEEEEEEESSCCEEEEEEEEECCSSCEEEEECC-C-SSHHHHHCEEESSEEEECTTBCCEEEEEECCCCC--
T ss_pred CEEEECcccEecEeEEECCEEEEEEEEEECCcceEEEEEec-C-CccccCcEEEECCcCEECCCCEEEEEEEEECCCc--
Confidence 5556667789998877655543 23446777888777632 1 0000123566777778899999999999988732
Q ss_pred eeeEEeEEEEEEEcCCCCCCCCCcceeEEEEEEEEEec
Q 040133 548 SGEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLKVVP 585 (1013)
Q Consensus 548 ~g~~~G~v~~tv~s~~~~~~~~~~~~~~~~~v~v~v~p 585 (1013)
|..+-.+++.+... ...+.|.++-.+++
T Consensus 84 -g~f~~~i~v~~~g~---------~~~~~L~i~G~vv~ 111 (112)
T 2e6j_A 84 -GNFEEEFLVNVNGS---------PEPVKLTIRGCVIG 111 (112)
T ss_dssp -EEEEEEECEEESSC---------SSCCCEEEEEEEEC
T ss_pred -ceEEEEEEEEECCC---------CceEEEEEEEEEEC
Confidence 44555455444321 12367777777764
No 49
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=46.81 E-value=9.3 Score=30.19 Aligned_cols=9 Identities=22% Similarity=0.456 Sum_probs=4.0
Q ss_pred Hhhhhhhhh
Q 040133 987 VFLSFWRIR 995 (1013)
Q Consensus 987 ~~~~~~~~~ 995 (1013)
++++|||.|
T Consensus 29 ~~~~~~RRR 37 (44)
T 2l2t_A 29 TFAVYVRRK 37 (44)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHhhhh
Confidence 334445443
No 50
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=44.78 E-value=9.9 Score=40.60 Aligned_cols=65 Identities=17% Similarity=0.341 Sum_probs=53.3
Q ss_pred HHHHHHHHHcCeEEEEcC-------CccccccCCCceeEEEecCCCc-C------------CHHHHHHHHHHHhhCCCcE
Q 040133 632 HIMFNMLRDAGYYVETLG-------SPFTCFDAHQYGTLMLVDLEDE-Y------------FEEEIEKLSYDVLNTGLGL 691 (1013)
Q Consensus 632 ~~~~~~l~~~g~~~e~l~-------~~~tcf~~~~y~~l~~vd~e~~-~------------~~~e~~~l~~~v~~~~l~~ 691 (1013)
..+-+.|+.+||-|+.+. -|.|--.+.+|.++++.|.... | .+++++.|++.|++ |-+|
T Consensus 36 ~~~~~aL~~~~~~V~~i~~~~~~~~fP~~~~~L~~yDvIIl~d~~~~~~l~~~~~~~~~~~~~~~~~~l~~~V~~-GGgL 114 (248)
T 3soz_A 36 DYLLSCLRQGNIDVDYMPAHIVQTRFPQTAEALACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIADYVAE-GGGL 114 (248)
T ss_dssp HHHHHHHTTTTCEEEEEETTHHHHSCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHT-TCEE
T ss_pred HHHHHHHhcCCceeEEeCchhhhhhCCCChHHHhcCCEEEEcCCCcchhccCccccccccCCHHHHHHHHHHHHh-CCEE
Confidence 456688999999999753 4556667799999999999873 4 57889999999966 9999
Q ss_pred EEEeee
Q 040133 692 AVFSEW 697 (1013)
Q Consensus 692 ~v~~dw 697 (1013)
|+.+..
T Consensus 115 i~~gG~ 120 (248)
T 3soz_A 115 LMIGGY 120 (248)
T ss_dssp EEECST
T ss_pred EEEcCc
Confidence 999974
No 51
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=39.78 E-value=15 Score=29.07 Aligned_cols=9 Identities=33% Similarity=0.132 Sum_probs=4.0
Q ss_pred HHhhhhhhh
Q 040133 986 LVFLSFWRI 994 (1013)
Q Consensus 986 ~~~~~~~~~ 994 (1013)
+++++|||.
T Consensus 29 ~~~~~~~RR 37 (44)
T 2ks1_B 29 LGIGLFMRR 37 (44)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhhh
Confidence 334444544
No 52
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=37.99 E-value=19 Score=34.82 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=30.6
Q ss_pred EEecCCCcC------------CHHHHHHHHHHHhhCCCcEEEEeeeccccccceeecccC-CCCccc
Q 040133 664 MLVDLEDEY------------FEEEIEKLSYDVLNTGLGLAVFSEWYNVETMVKMRFFDD-NTRSWW 717 (1013)
Q Consensus 664 ~~vd~e~~~------------~~~e~~~l~~~v~~~~l~~~v~~dwy~~~~~~~~~f~d~-~~~~~w 717 (1013)
|||||+.+. -|+++-++.+....++ ...+--++|||+ +|+.|=
T Consensus 25 ~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~-----------~~~~y~V~FFd~~~t~aWv 80 (130)
T 3l42_A 25 LIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEA-----------REHLYLVLFFDNKRTWQWL 80 (130)
T ss_dssp EEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHC-----------SSCEEEEEESSTTCCEEEE
T ss_pred EEcCCCCccccccccCccCCCChHHHHhhcccccccC-----------CCcEEEEEeCCCCCceEee
Confidence 569998775 2899999987653321 245556799995 788885
No 53
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=32.79 E-value=50 Score=40.06 Aligned_cols=72 Identities=11% Similarity=0.038 Sum_probs=54.3
Q ss_pred cHHHHHHHHHHcCeEEEEcCCccccccCCCceeEEEecCCCcCCHHHHHHHHHHHhhCCCcEEEEeeeccccccceeecc
Q 040133 630 NFHIMFNMLRDAGYYVETLGSPFTCFDAHQYGTLMLVDLEDEYFEEEIEKLSYDVLNTGLGLAVFSEWYNVETMVKMRFF 709 (1013)
Q Consensus 630 n~~~~~~~l~~~g~~~e~l~~~~tcf~~~~y~~l~~vd~e~~~~~~e~~~l~~~v~~~~l~~~v~~dwy~~~~~~~~~f~ 709 (1013)
.++.+|..|+++|+-|+++... -|++.|-.|++=+ -.-+.++..++|++.|+ +|-.||+-. ..-+.
T Consensus 426 ~~~~~y~aL~~~gi~vD~v~~~---~dL~~Yklvv~P~-~~~~~~~~~~~L~~yV~-~GG~lv~t~---------~sG~~ 491 (675)
T 3tty_A 426 EVHKYYDALYKQNIQTDMISVE---EDLSKYKVVIAPV-MYMVKPGFAERVERFVA-QGGTFVTTF---------FSGIV 491 (675)
T ss_dssp HHHHHHHHHHTTTCCEEEECTT---SCCTTCSEEEETT-CCBCCTTHHHHHHHHHH-TTCEEEEET---------TCSCB
T ss_pred HHHHHHHHHHHcCceEEEecCc---CCcccCCEEEEec-cEecCHHHHHHHHHHHh-cCCEEEEEc---------cCCcC
Confidence 4689999999999999999876 2889997665544 44677889999999995 577777652 23356
Q ss_pred cCCCCc
Q 040133 710 DDNTRS 715 (1013)
Q Consensus 710 d~~~~~ 715 (1013)
|||-+-
T Consensus 492 de~~~~ 497 (675)
T 3tty_A 492 NENDLV 497 (675)
T ss_dssp CTTSCB
T ss_pred CCCCcc
Confidence 776654
No 54
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=31.69 E-value=1.8e+02 Score=27.89 Aligned_cols=106 Identities=10% Similarity=0.098 Sum_probs=70.6
Q ss_pred cCCCcccCCcccccCCCCCCCCccc--ccccCCCccEEEEEEeecC---CCCCeeEEEEEcceeeeecccEEEEEEEEcC
Q 040133 468 YQPRASIFPSVLDYTDCPYSWPFCR--QPLYAGAMPVIFNVTILNG---WEGNLLNIRFTYSEVIWPWTGYLALHMQIKE 542 (1013)
Q Consensus 468 ~~p~~~~~p~~l~~~~~~~~~p~~~--~~~~~g~~pvt~n~ti~n~---~~g~~~~v~~s~s~v~~p~~G~~~v~vtv~~ 542 (1013)
..|..++.+..++|+.+.+.-+... +..+.|..|+.+.+..... .....+++ +++.-++++++.+.|+|++..
T Consensus 23 ~~P~i~v~~~~ldFG~v~~~~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v--~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 23 FLPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRA--EPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp TSCCEEESCCEEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEE--ESCEEEECTTCEEEEEEEECB
T ss_pred cCCceEeeeeeEEeeeceeeeeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhc--CCcccccCCCCeeEEEEEEEE
Confidence 5688888999999999888766643 3347899999999874321 12234444 677789999999999998875
Q ss_pred CCc---cce---eeEEeEEEEEEEcCCCCCCCCCcceeEEEEEEEEEec
Q 040133 543 EGA---KFS---GEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLKVVP 585 (1013)
Q Consensus 543 ~~~---~f~---g~~~G~v~~tv~s~~~~~~~~~~~~~~~~~v~v~v~p 585 (1013)
+.. .++ ...+..+.+.|+. .....|+|...-.|
T Consensus 101 ~~~~~~~ln~g~~~l~diLvL~Ve~----------G~d~fI~v~g~~~p 139 (140)
T 3qbt_B 101 SKDSVTILNSGEDKIEDILVLHLDR----------GKDYFLTISGNYLP 139 (140)
T ss_dssp CHHHHHHHHHSSSCSCEEEEEEETT----------SCEEEEEEEEEECC
T ss_pred ccCcccccccchhhhheeEEEEeec----------CCcEEEEEeccccC
Confidence 431 000 2235566777764 22467777776655
No 55
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=25.44 E-value=69 Score=36.24 Aligned_cols=75 Identities=20% Similarity=0.257 Sum_probs=46.2
Q ss_pred cCCCCCCCcCCCCCCCCCccccCCCCCCCcHHHHHHHHHHc-Ce-EEEEcCCccccccCCCceeEEEecCCCcCCHHHHH
Q 040133 601 IKYPPGYIPRDSLDVRSDILDWHGDHLHTNFHIMFNMLRDA-GY-YVETLGSPFTCFDAHQYGTLMLVDLEDEYFEEEIE 678 (1013)
Q Consensus 601 ~~yp~g~~prd~l~~~~~~~d~~~dh~~tn~~~~~~~l~~~-g~-~~e~l~~~~tcf~~~~y~~l~~vd~e~~~~~~e~~ 678 (1013)
-..-+|.+|+.-+ +..-+-|.|..- ......+++. || .||+-... .+ +-+.+.++||+
T Consensus 8 ~~~~~~~~~~~~~--m~~~~rW~g~~d----~~~L~~i~q~~G~~gIe~~l~~--~~------------~g~~w~~~~i~ 67 (386)
T 3bdk_A 8 HHHSSGLVPRGSH--MKMSFRWYGKKD----PVTLEEIKAIPGMQGIVTAVYD--VP------------VGQAWPLENIL 67 (386)
T ss_dssp -----------CC--BCCCCBCCCTTC----SSCHHHHHTSTTCCEEEECCCS--SC------------SSSCCCHHHHH
T ss_pred cccccccccccch--hhcEEEecCCCC----HHHHHHHHhcCCCCEEEeCCcc--cC------------CCCCCCHHHHH
Confidence 3456788998844 446799998622 2356789999 98 48872211 01 23568889999
Q ss_pred HHHHHHhhCCCcEEEEe
Q 040133 679 KLSYDVLNTGLGLAVFS 695 (1013)
Q Consensus 679 ~l~~~v~~~~l~~~v~~ 695 (1013)
+|++.++++||.+.++.
T Consensus 68 ~lk~~l~~~GL~i~~i~ 84 (386)
T 3bdk_A 68 ELKKMVEEAGLEITVIE 84 (386)
T ss_dssp HHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCEEEEEe
Confidence 99999999999998875
No 56
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=24.36 E-value=52 Score=24.71 Aligned_cols=18 Identities=28% Similarity=0.553 Sum_probs=10.1
Q ss_pred HHhhhhhhhhhhhhcccc
Q 040133 986 LVFLSFWRIRQKRRRRRK 1003 (1013)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~ 1003 (1013)
+++++..|-+|||...++
T Consensus 15 ifYFl~iRPQ~Kr~K~~~ 32 (37)
T 2rdd_B 15 IFYFMILRPQQKRTKEHK 32 (37)
T ss_dssp HHHHHTHHHHHHHHHHHT
T ss_pred HHHHHHhhhHHHHHHHHH
Confidence 445555666666654443
No 57
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.29 E-value=1.6e+02 Score=30.16 Aligned_cols=54 Identities=9% Similarity=0.057 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHcCe-EEEEcCCccccccCCCceeEEEecCCCcCCHHHHHHHHHHHhhCCCcEEEEeeecc
Q 040133 630 NFHIMFNMLRDAGY-YVETLGSPFTCFDAHQYGTLMLVDLEDEYFEEEIEKLSYDVLNTGLGLAVFSEWYN 699 (1013)
Q Consensus 630 n~~~~~~~l~~~g~-~~e~l~~~~tcf~~~~y~~l~~vd~e~~~~~~e~~~l~~~v~~~~l~~~v~~dwy~ 699 (1013)
.+.++...+++.|| +||+-...+ ...+.+++++.+++.++++||.+..+.-++.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~----------------~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~ 85 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHL----------------PLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM 85 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTS----------------CTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccC----------------CCCCCHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 68899999999999 799865410 1235689999999999999999998876554
Done!