Citrus Sinensis ID: 040133

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010---
MTPHRTLSSFPFKSSLLTVLVSFYLLQFIPSPSPIQTPTQNQNQTRISRNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVSVDSSYKRGLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYEILKNYQPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPVIFNVTILNGWEGNLLNIRFTYSEVIWPWTGYLALHMQIKEEGAKFSGEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLKVVPTPPRSKRVLWDQFHSIKYPPGYIPRDSLDVRSDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPFTCFDAHQYGTLMLVDLEDEYFEEEIEKLSYDVLNTGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLNGEQSRYASGTDIVRFPGGGNVHSFPFLDTTESGATQNVLTSSTTKADSPILGLLEVGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSANIRDSVLFSDSSKHDTPLVEDDNQLPSRRTDVNFSSYSAVVGKDLACRSDSRFEVWGTKGYNLDVREGDKRKPGYPVFHVGRGFNSTMDISKSRRPKYTQINKSDYLGSKYLGLIYGEELDMPVLVASHWLIPAVVAVTGVLVFLSFWRIRQKRRRRRKGSGTLRLANL
ccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHccccccEEEEcccccccccccCEEEEEcccccHHHHHHHHHccccCEEECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHccccccCECccccEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHcccEEEEEccccccccccccccccccccEEEEEECccccccccccccccccccccccccccccEEcccccEEEEcccccEEEEccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccCEEEcHHHHHHHHHcccccccccccccccccccccccCECcccccccccEEEEEEEEcccccccCEEEEEcccEEEEccEEEEEEEEEEcccccCEEEEEEEEEEEEEcccccccccCEEEEEEEEEEEEEECcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccEEEEcccccccccccccCEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEccccccccEEccccccccccccccccccccccccccccccccccccCEEEEEEEEccCEEEEEccccccccccccEEEEEEccccccccccccccccccccccccEEEEEECcccEEEEEEccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
*********FPFKSSLLTVLVSFYLLQFIPS****************SRNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVSVDSSYKRGLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYEILKNYQPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPVIFNVTILNGWEGNLLNIRFTYSEVIWPWTGYLALHMQIKEEGAKFSGEIEGNVSVSVHSPPAR*EKSSRRCTCMLQLKLKVVPTPPRSKRVLWDQFHSIKYPPGYIPRDSLDVRSDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPFTCFDAHQYGTLMLVDLEDEYFEEEIEKLSYDVLNTGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLNGEQSRYASGTDIVRFPGGGNVHSFPFLDTT*****************SPILGLLEVGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSANIRDSVLF******************SRRTDVNFSSYSAVVGKDLACRSDSRFEVWGTKGYNLDVREGDKRKPGYPVFHVGRGFNSTM*********Y***NKSDYLGSKYLGLIYGEELDMPVLVASHWLIPAVVAVTGVLVFLSFWRIR******************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTPHRTLSSFPFKSSLLTVLVSFYLLQFIPSPSPIQTPTQNQNQTRISRNNYIVRFREYKTAEDHCSYLKSRITPDGWKWIERKNPASKYPTDFGLISVEESAKQGLIEEIERLNLVKDVSVDSSYKRGLLGGAFEDGKKRPGKIFTSMSFNEGEHYTATTSNCTINWRRHLLMQRSQVTSLFGADALWGKGYTGAKVKMAIFDTGIRENHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGQDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNIDVLNLSIGGPDYLDLPFIEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMSTWEIPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPENNRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYEILKNYQPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPVIFNVTILNGWEGNLLNIRFTYSEVIWPWTGYLALHMQIKEEGAKFSGEIEGNVSVSVHSPPARGEKSSRRCTCMLQLKLKVVPTPPRSKRVLWDQFHSIKYPPGYIPRDSLDVRSDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPFTCFDAHQYGTLMLVDLEDEYFEEEIEKLSYDVLNTGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLNGEQSRYASGTDIVRFPGGGNVHSFPFLDTTESGATQNVLTSSTTKADSPILGLLEVGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSANIRDSVLFSDSSKHDTPLVEDDNQLPSRRTDVNFSSYSAVVGKDLACRSDSRFEVWGTKGYNLDVREGDKRKPGYPVFHVGRGFNSTMDISKSRRPKYTQINKSDYLGSKYLGLIYGEELDMPVLVASHWLIPAVVAVTGVLVFLSFWRIRQKRRRRRKGSGTLRLANL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Membrane-bound transcription factor site-1 protease Catalyzes the first step in the proteolytic activation of the sterol regulatory element-binding proteins (SREBPs). Other known substrates are BDNF and ATF6. Cleaves after hydrophobic or small residues, provided that Arg or Lys is in position P4. Cleaves known substrates after Arg-Ser-Val-Leu (SERBP-2), Arg-His-Leu-Leu (ATF6), Arg-Gly-Leu-Thr (BDNF) and its own propeptide after Arg-Arg-Leu-Leu.probableQ9WTZ3
Membrane-bound transcription factor site-1 protease Catalyzes the first step in the proteolytic activation of the sterol regulatory element-binding proteins (SREBPs). Other known substrates are BDNF and ATF6. Cleaves after hydrophobic or small residues, provided that Arg or Lys is in position P4. Cleaves known substrates after Arg-Ser-Val-Leu (SERBP-2), Arg-His-Leu-Leu (ATF6), Arg-Gly-Leu-Thr (BDNF) and its own propeptide after Arg-Arg-Leu-Leu.probableQ9WTZ2
Membrane-bound transcription factor site-1 protease Catalyzes the first step in the proteolytic activation of the sterol regulatory element-binding proteins (SREBPs). Other known substrates are BDNF and ATF6. Cleaves after hydrophobic or small residues, provided that Arg or Lys is in position P4. Cleaves known substrates after Arg-Ser-Val-Leu (SERBP-2), Arg-His-Leu-Leu (ATF6), Arg-Gly-Leu-Thr (BDNF) and its own propeptide after Arg-Arg-Leu-Leu.probableQ14703

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.21.-Serine endopeptidases.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3I6S, chain A
Confidence level:very confident
Coverage over the Query: 185-463
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Template: 1XF1, chain A
Confidence level:very confident
Coverage over the Query: 181-558
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Template: 3T41, chain A
Confidence level:very confident
Coverage over the Query: 48-136,155-363,375-467
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Template: 2P4E, chain P
Confidence level:very confident
Coverage over the Query: 45-129,165-164
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Template: 3LXU, chain X
Confidence level:very confident
Coverage over the Query: 197-382,397-671
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Template: 1R6V, chain A
Confidence level:very confident
Coverage over the Query: 42-172,183-362,375-463
View the alignment between query and template
View the model in PyMOL