BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040136
(681 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/675 (58%), Positives = 498/675 (73%), Gaps = 47/675 (6%)
Query: 54 SESENEWERLLKPFDLNELRKSLHKITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHT 113
++S NEWE+LLKPFDL+ LR S HKITPFQL KLL LPL+V TSME+F+W GSQ GY H+
Sbjct: 51 TDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHS 110
Query: 114 FDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLL 173
FDVY VLI KLGAN EFK ID +L+QMK+EGI+ +ESLFI IM+ Y + G PGQ TRL+L
Sbjct: 111 FDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 170
Query: 174 DMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMV 233
+M++VY C+PTF+SYNVVL++LV+GNCHKVA N+FYDMLS+ I PT++TFGVVMKA C V
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 230
Query: 234 NEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTF 293
NE+DSA SLLRDMTKHGCVPNSV+YQTLIH+LSK NRV+EAL LLEEM LMGC D +TF
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 294 NDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS 353
NDVI GLCK +RI+EAAK+V+RML+RGF PDDITYG LM+GLC+ GRVD A+ L +IP
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 354 ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALE 413
+V+ NT+I+G+V GR D+AKA+ D + S G +PDV T+N LI+G K+ G ALE
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT----------- 462
+++ M KGC+PN+ +YTILVDGFCK G++++A ++NEM A GL NT
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 463 ------------------------------------GDRIEEALGLYQDMLLEGVTANTV 486
D I+ AL L +DM+ EGV ANTV
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 487 TYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEM 546
TYNTLI+AFLRRG + EA KLVN+M+F+G PLDEITYN LIK LC AG VDK LFE+M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 547 MRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCI 606
+R G PS+ISCNILINGLCR+ A+EF ++M+ RG TPDIVT+NSLINGLC+ G I
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 607 QEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYIL 666
++ L +F KLQAEGI PD VT+NTL+SW K G DA L+L +G+ +GFVPN TW IL
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 667 VRNLVKEINMESWNF 681
+++++ + ++ F
Sbjct: 711 LQSIIPQETLDRRRF 725
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 312/616 (50%), Gaps = 20/616 (3%)
Query: 79 ITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLL 138
+ P + +++ D ++E+F + G+ HT Y +I+KLG +F+ ++ VL+
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 139 QMKEE-GIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVA 197
M+E G E +++ MK YGR G +A + M Y C+PT SYN ++ VLV
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVD 123
Query: 198 GNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVV 257
A ++ M +GI+P VY+F + MK+ C + +A LL +M+ GC N V
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 258 YQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRML 317
Y T++ + N +E L +M+ G + + TFN ++ LCK + E KL+D+++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 318 VRGFTPDDITYGVLMHGLCRTGRVDEA----RALLNKIPSANVVLLNTVINGYVISGRFD 373
RG P+ TY + + GLC+ G +D A L+ + P +V+ N +I G + +F
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 374 EAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTIL 433
EA+ ++ M++ G PD +T+N LI G CK A +V G P+ TY L
Sbjct: 304 EAE-VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 434 VDGFCKEGQLEKANIIINEMLAKGL------------SLNTGDRIEEALGLYQDMLLEGV 481
+DG C EG+ +A + NE L KG+ L+ I EA L +M +G+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 482 TANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLG 541
T+N L++ + G + +A LV M+ +G D T+N LI ++ L
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 542 LFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLC 601
+ + M+ G+ P + N L+NGLC+T K +E + M+ +G P++ T+N L+ LC
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 602 KMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHK-GVANGFVPND 660
+ + EAL L ++++ + + PDAVT+ TLI K G D A+ + K A +
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 661 ATWYILVRNLVKEINM 676
T+ I++ +++N+
Sbjct: 603 PTYNIIIHAFTEKLNV 618
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 261/581 (44%), Gaps = 54/581 (9%)
Query: 130 FKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYN 189
F V ++M++ GI F + MK + + P A RLL +M S GC+ +Y
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS-QGCEMNVVAYC 185
Query: 190 VVLDVLVAGNCHKVAPNLFYDMLSKGIS-------------------------------- 217
V+ N LF ML+ G+S
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 218 ---PTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEA 274
P ++T+ + ++ LC E+D A ++ + + G P+ + Y LI+ L K+++ EA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 275 LMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHG 334
+ L +M+ G D T+N +I G CK + A ++V + GF PD TY L+ G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 335 LCRTGRVDEARALLN----KIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIP 390
LC G + A AL N K NV+L NT+I G G EA A + M G IP
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA-AQLANEMSEKGLIP 424
Query: 391 DVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIII 450
+V TFNIL++GLCK A LV M KG P+I T+ IL+ G+ + ++E A I+
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 451 NEMLAKGL--------SLNTG----DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRR 498
+ ML G+ SL G + E+ + Y+ M+ +G N T+N L+ + R
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 499 GSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRK-GIKPSSIS 557
L EA L+ +M + D +T+ LI C G +D LF +M + S+ +
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 558 CNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQ 617
NI+I+ A + ++M+ R L PD TY +++G CK G + ++
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 618 AEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVP 658
G P T +I+ E +A I+H+ V G VP
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 209/416 (50%), Gaps = 27/416 (6%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G +P +YN ++ G ++A + D + G P +T+ ++ LC E + A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
+L + G PN ++Y TLI LS + EA L EM G +VQTFN +++G
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI----PSAN 355
LCK+ + +A LV M+ +G+ PD T+ +L+HG +++ A +L+ + +
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 356 VVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELV 415
V N+++NG + +F++ Y +M+ GC P++FTFNIL+ LC+ R+ AL L+
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMET-YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 416 NAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQD 475
M K P+ VT+ L+DGFCK G L+ A + +M EEA Y+
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-------------EEA---YK- 597
Query: 476 MLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGA 535
V+++T TYN +IHAF + ++ A KL +M+ R D TY ++ C G
Sbjct: 598 -----VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 536 VDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIV 591
V+ G EMM G PS + +IN LC + A + M+ +GL P+ V
Sbjct: 653 VNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 118/284 (41%), Gaps = 29/284 (10%)
Query: 86 KLLRLPLDVDTSMEIFTWAGSQEGYCHT------FDVYYVLIDKLGANK----------- 128
++L + LD +++T+ G C T + Y +++K A
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 129 -EFKVIDS---VLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPT 184
++ +D +L +MK + + F ++ + + G A L M+ Y +
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 185 FRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLR 244
+YN+++ +A LF +M+ + + P YT+ +++ C V+ L
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 245 DMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVN 304
+M ++G +P+ +I+ L +RV EA ++ M+ G + ++ +C V+
Sbjct: 662 EMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP------EAVNTICDVD 715
Query: 305 RIHEAA-KLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARAL 347
+ AA KLV L++ Y +L GL R R+ + +
Sbjct: 716 KKEVAAPKLVLEDLLKKSCITYYAYELLFDGL-RDKRLRKKKGF 758
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/616 (30%), Positives = 306/616 (49%), Gaps = 60/616 (9%)
Query: 91 PLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRES 150
PL+ S ++F A + +I+ + +F ++ +L +++ E + E
Sbjct: 54 PLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIER 113
Query: 151 LFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLV-AGNCHKVAPNLFY 209
FI++ + YG+ +P +A L M + C+ + +S+N VL+V++ G H+ FY
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLE--FY 171
Query: 210 DM-----LSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHA 264
D ++ ISP +F +V+KALC + VD A + R M + C+P+ Y TL+
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 265 LSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPD 324
L K R+ EA++LL+EM GC+ +N +I GLCK + KLVD M ++G P+
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 325 DITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVLLNTVINGYVISGRFDEAKAIFY 380
++TY L+HGLC G++D+A +LL ++ S+ N V T+ING V R +A +
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL- 350
Query: 381 DSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKE 440
SM G + +++LI GL K+ + A+ L MA KGC+PNIV Y++LVDG C+E
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 441 GQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGS 500
G+ +A I+N M+A G N TY++L+ F + G
Sbjct: 411 GKPNEAKEILNRMIA-----------------------SGCLPNAYTYSSLMKGFFKTGL 447
Query: 501 LHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNI 560
EA ++ +M GC ++ Y+ LI LC G V + + ++ +M+ GIKP +++ +
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 561 LINGLCRTRKANTALEFLRDMI---HRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQ 617
+I GLC + AL+ +M+ PD+VTYN L++GLC I A++L + +
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 618 AEGIYPDAVTYNT---------------------LISWHFKEGLFDDAFLILHKGVANGF 656
G PD +T NT L+ K A I+ +
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYL 627
Query: 657 VPNDATWYILVRNLVK 672
P +TW ++VR + K
Sbjct: 628 APKTSTWAMIVREICK 643
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 158/361 (43%), Gaps = 31/361 (8%)
Query: 321 FTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVLLN----TVINGYVISGRFDEAK 376
F D T ++ +G D LL++I N V++ V Y + D+A
Sbjct: 73 FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132
Query: 377 AIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALE----LVNAMAVKGCEPNIVTYTI 432
+F+ + C V +FN +++ + + + LE +VN+ PN +++ +
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 433 LVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLI 492
++ CK L DR A+ +++ M + TY TL+
Sbjct: 193 VIKALCK--------------------LRFVDR---AIEVFRGMPERKCLPDGYTYCTLM 229
Query: 493 HAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIK 552
+ + EA L+++M GC + YN LI LC G + + L + M KG
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 553 PSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNL 612
P+ ++ N LI+GLC K + A+ L M+ P+ VTY +LINGL K +A+ L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 613 FDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
++ G + + Y+ LIS FKEG ++A + K G PN + +LV L +
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 673 E 673
E
Sbjct: 410 E 410
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSK---GISPTVYTFGVVMKALCMVNEV 236
G +P +Y+ ++ L A L+++ML + P V T+ +++ LCM ++
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 237 DSACSLLRDMTKHGCVPNSVVYQTLIHALS-KSNRVSEALMLLEEMILM---------GC 286
A LL M GC P+ + T ++ LS KSN + LEE+++ C
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGAC 616
Query: 287 T-----------SDVQTFNDVIHGLCKVNRIHEA 309
T T+ ++ +CK +I+ A
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 285/512 (55%), Gaps = 17/512 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ +N +L + N ++ +L M + GIS +YT+ + + C +++ A ++
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ S R+S+A+ L+++M+ MG D TF +IHGL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVL 358
N+ EA LVD+M+ RG PD +TYG +++GLC+ G +D A +LL K+ A+VV+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+I+G D+A +F + M + G PDVFT++ LI LC R+ A L++ M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTE-MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG----DRI 466
+ PN+VT++ L+D F KEG+L +A + +EM+ + + SL G DR+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
+EA +++ M+ + N VTY+TLI F + + E +L +M RG + +TY L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I A D +F++M+ G+ P+ ++ NIL++GLC+ K A+ + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
PDI TYN +I G+CK G +++ LF L +G+ P+ + YNT+IS ++G ++A
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKEINMES 678
+L K +G +PN T+ L+R +++ + E+
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 262/547 (47%), Gaps = 27/547 (4%)
Query: 120 LIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVY 179
L+ + +F+++ S+ QM+ GI + + + + R A +L M +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL- 147
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKV----APNLFYDMLSKGISPTVYTFGVVMKALCMVNE 235
G +P V L L+ G CH A L M+ G P +TF ++ L + N+
Sbjct: 148 GYEPDI----VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 236 VDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFND 295
A +L+ M + GC P+ V Y T+++ L K + AL LL++M +DV +N
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP--- 352
+I GLCK + +A L M +G PD TY L+ LC GR +A LL+ +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 353 -SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSA 411
+ NVV + +I+ +V G+ EA+ + YD M+ PD+FT++ LI+G C R A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKL-YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 412 LELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT--------- 462
+ M K C PN+VTY+ L+ GFCK ++E+ + EM +GL NT
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 463 ---GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLD 519
+ A +++ M+ GV N +TYN L+ + G L +A + + D
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 520 EITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLR 579
TYN +I+ +C AG V+ G LF + KG+ P+ I+ N +I+G CR A L+
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 580 DMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEG 639
M G P+ TYN+LI + G + + L ++++ G DA T L++ +G
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDG 621
Query: 640 LFDDAFL 646
D +FL
Sbjct: 622 RLDKSFL 628
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 235/464 (50%), Gaps = 18/464 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+VD A L DM K P+ V + L+ A++K N+ + L E+M +G + D+ T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS- 353
I+ C+ +++ A ++ +M+ G+ PD +T L++G C + R+ +A AL++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 354 ---ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
+ T+I+G + + EA A+ D M+ GC PD+ T+ +++GLCK+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALV-DQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS----------- 459
AL L+ M E ++V Y ++DG CK ++ A + EM KG+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 460 -LNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
L R +A L DM+ + N VT++ LI AF++ G L EA KL ++M+ R
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
D TY+ LI C +D+ +FE M+ K P+ ++ + LI G C+ ++ +E
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
R+M RGL + VTY +LI+G + A +F ++ + G++P+ +TYN L+ K
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES-WNF 681
G A ++ + P+ T+ I++ + K +E W
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 227/432 (52%), Gaps = 21/432 (4%)
Query: 259 QTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLV 318
+ L + LS +V +A+ L +M+ + FN ++ + K+N+ L ++M
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 319 RGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRFDE 374
G + D TY + ++ CR ++ A A+L K+ ++V L++++NGY S R +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 375 AKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILV 434
A A+ D M+ +G PD FTF LIHGL + A+ LV+ M +GC+P++VTY +V
Sbjct: 172 AVALV-DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 435 DGFCKEGQLE--------------KANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEG 480
+G CK G ++ +A+++I + GL +++AL L+ +M +G
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC--KYKHMDDALNLFTEMDNKG 288
Query: 481 VTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGL 540
+ + TY++LI G +A +L++DM+ R + +T++ LI A G + +
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 541 GLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGL 600
L++EM+++ I P + + LING C + + A MI + P++VTY++LI G
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 601 CKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPND 660
CK ++E + LF ++ G+ + VTY TLI F+ D+A ++ + V+ G PN
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 661 ATWYILVRNLVK 672
T+ IL+ L K
Sbjct: 469 LTYNILLDGLCK 480
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 234/531 (44%), Gaps = 54/531 (10%)
Query: 73 RKSLHKITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKV 132
R+S + L K+++L + D I T + GYCH+ ++
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPD----IVTLSSLLNGYCHSK----------------RI 169
Query: 133 IDSVLL--QMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNV 190
D+V L QM E G F ++ +A L+ D GCQP +Y
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV-DQMVQRGCQPDLVTYGT 228
Query: 191 VLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHG 250
V++ L +A +L M I V + ++ LC +D A +L +M G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 251 CVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAA 310
P+ Y +LI L R S+A LL +MI +V TF+ +I K ++ EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 311 KLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGY 366
KL D M+ R PD TY L++G C R+DEA+ + + S NVV +T+I G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 367 VISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPN 426
+ R +E +F + M G + + T+ LIHG + R +A + M G PN
Sbjct: 409 CKAKRVEEGMELFRE-MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 427 IVTYTILVDGFCKEGQLEKA-------------------NIIINEMLAKGLSLNTGDRIE 467
I+TY IL+DG CK G+L KA NI+I M G ++E
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG-------KVE 520
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
+ L+ ++ L+GV+ N + YNT+I F R+GS EA L+ M G + TYN LI
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
+A G + L +EM G + + ++ N L R + L+ L
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 3/243 (1%)
Query: 422 GCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGV 481
G P + ++ L C E A+ E+L LS ++++A+ L+ DM+
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDII--KVDDAVDLFGDMVKSRP 79
Query: 482 TANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLG 541
+ V +N L+ A + L M G D TY+ I C + L
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 542 LFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLC 601
+ +MM+ G +P ++ + L+NG C +++ + A+ + M+ G PD T+ +LI+GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 602 KMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDA 661
EA+ L D++ G PD VTY T+++ K G D A +L K + G + D
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK-MEKGKIEADV 258
Query: 662 TWY 664
Y
Sbjct: 259 VIY 261
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 282 bits (722), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 267/475 (56%), Gaps = 17/475 (3%)
Query: 215 GISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEA 274
G+S +YT+ +++ LC +++ A ++L M K G P+ V +L++ NR+SEA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 275 LMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHG 334
+ L+++M+ MG D TF ++HGL + N+ EA LV+RM+V+G PD +TYG +++G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 335 LCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIP 390
LC+ G D A LLNK+ A+VV+ +TVI+ D+A +F + M + G P
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE-MDNKGIRP 273
Query: 391 DVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIII 450
DVFT++ LI LC R+ A L++ M + PN+VT+ L+D F KEG+L +A +
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 451 NEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRR 498
+EM+ + + N DR++EA ++ M+ + + VTYNTLI+ F +
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 499 GSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISC 558
+ + +L DM RG + +TY LI A D +F++M+ G+ P+ ++
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 559 NILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQA 618
N L++GLC+ K A+ + + PDI TYN + G+CK G +++ +LF L
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 619 EGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
+G+ PD + YNT+IS K+GL ++A+ + K +G +P+ T+ L+R +++
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 264/512 (51%), Gaps = 18/512 (3%)
Query: 178 VYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVD 237
+ G +YN++++ L + A + M+ G P++ T ++ C N +
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 238 SACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVI 297
A +L+ M + G P++V + TL+H L + N+ SEA+ L+E M++ GC D+ T+ VI
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 298 HGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALL----NKIPS 353
+GLCK A L+++M D + Y ++ LC+ VD+A L NK
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 354 ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALE 413
+V +++I+ GR+ +A + D ML P+V TFN LI K+ + A +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSD-MLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG-----LSLNT------ 462
L + M + +PNIVTY L++GFC +L++A I M++K ++ NT
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 463 -GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEI 521
++ + + L++DM G+ NTVTY TLIH F + A + M+ G + +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 522 TYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDM 581
TYN L+ LC G ++K + +FE + + ++P + NI+ G+C+ K + +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 582 IHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLF 641
+G+ PD++ YN++I+G CK G +EA LF K++ +G PD+ TYNTLI H ++G
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG-D 570
Query: 642 DDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
A L K + + DA+ Y LV +++ +
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 230/479 (48%), Gaps = 29/479 (6%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D G QP ++ ++ L N A L M+ KG P + T+G V+ LC
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
E D A +LL M K + V+Y T+I +L K V +AL L EM G DV
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T++ +I LC R +A++L+ ML R P+ +T+ L+ + G++ EA L +++
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 352 PS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
N+V N++ING+ + R DEA+ IF M+S C+PDV T+N LI+G CK ++
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
+EL M+ +G N VTYT L+ GF + + A ++ +M++
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS------------ 443
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
+GV N +TYNTL+ + G L +A + + D TYN +
Sbjct: 444 -----------DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLT 587
+ +C AG V+ G LF + KG+KP I+ N +I+G C+ A M G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 588 PDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
PD TYN+LI + G + L ++++ DA TY L++ +G D FL
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGFL 610
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 238/464 (51%), Gaps = 18/464 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
++D A L +M K P+ V + L+ A++K + + E+M ++G + ++ T+N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP-- 352
+I+ LC+ +++ A ++ +M+ G+ P +T L++G C R+ EA AL++++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 353 --SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
+ V T+++G + EA A+ + M+ GC PD+ T+ +I+GLCK+
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALV-ERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS----------- 459
AL L+N M E ++V Y+ ++D CK ++ A + EM KG+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 460 -LNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
L R +A L DML + N VT+N+LI AF + G L EA KL ++M+ R
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
+ +TYN LI C +D+ +F M+ K P ++ N LING C+ +K +E
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
RDM RGL + VTY +LI+G + A +F ++ ++G++P+ +TYNTL+ K
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES-WNF 681
G + A ++ + P+ T+ I+ + K +E W+
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 282 bits (722), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/507 (32%), Positives = 280/507 (55%), Gaps = 17/507 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ ++ +L + N + +L M + GIS +YT+ +++ C +++ A ++
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ NR+S+A+ L+ +M+ MG D TFN +IHGL +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSAN----VVL 358
NR EA LVDRM+V+G PD +TYG++++GLC+ G +D A +LL K+ VV+
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+I+ ++A +F + M + G P+V T+N LI LC R+ A L++ M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG----DRI 466
+ PN+VT++ L+D F KEG+L +A + +EM+ + + SL G DR+
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
+EA +++ M+ + N VTYNTLI F + + E +L +M RG + +TY L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I A D +F++M+ G+ P ++ +IL++GLC K TAL + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
PDI TYN +I G+CK G +++ +LF L +G+ P+ VTY T++S ++GL ++A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKE 673
+ + G +P+ T+ L+R +++
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRD 584
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 258/546 (47%), Gaps = 38/546 (6%)
Query: 109 GYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEG----IICRESLFILIMKYYGRGGV 164
G H Y +LI+ + + +VL +M + G I+ SL + + G
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL----LNGFCHGNR 166
Query: 165 PGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFG 224
A L+ M + G QP ++N ++ L N A L M+ KG P + T+G
Sbjct: 167 ISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 225 VVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILM 284
+V+ LC ++D A SLL+ M + P V+Y T+I AL V++AL L EM
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 285 GCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA 344
G +V T+N +I LC R +A++L+ M+ R P+ +T+ L+ + G++ EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 345 RALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIH 400
L +++ ++ +++ING+ + R DEAK +F + M+S C P+V T+N LI
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLIK 404
Query: 401 GLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSL 460
G CK +R +EL M+ +G N VTYT L+ GF + + + A I+
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV----------- 453
Query: 461 NTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
++ M+ +GV + +TY+ L+ G + A + + D
Sbjct: 454 ------------FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRD 580
TYN +I+ +C AG V+ G LF + KG+KP+ ++ +++G CR A R+
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 581 MIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGL 640
M G PD TYN+LI + G + L ++++ DA T L++ +G
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGR 620
Query: 641 FDDAFL 646
D +FL
Sbjct: 621 LDKSFL 626
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 235/464 (50%), Gaps = 18/464 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
++D A +L DM K P+ V + L+ A++K N+ + L E+M +G + ++ T++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP-- 352
+I+ C+ +++ A ++ +M+ G+ PD +T L++G C R+ +A +L+ ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 353 --SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
+ NT+I+G R EA A+ D M+ GC PD+ T+ I+++GLCK+
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALV-DRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT-------- 462
AL L+ M EP +V Y ++D C + A + EM KG+ N
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 463 ----GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
R +A L DM+ + N VT++ LI AF++ G L EA KL ++M+ R
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
D TY+ LI C +D+ +FE M+ K P+ ++ N LI G C+ ++ + +E
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
R+M RGL + VTY +LI+G + A +F ++ ++G+ PD +TY+ L+
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES-WNF 681
G + A ++ + P+ T+ I++ + K +E W+
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 281 bits (720), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 176/605 (29%), Positives = 292/605 (48%), Gaps = 18/605 (2%)
Query: 80 TPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQ 139
T +L LR D ++ +F A + + +Y ++ +LG + F + +L
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILED 108
Query: 140 MKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGN 199
MK S F+++++ Y + + + ++ M +G +P YN +L++LV GN
Sbjct: 109 MKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN 168
Query: 200 CHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQ 259
K+ M GI P V TF V++KALC +++ A +L DM +G VP+ +
Sbjct: 169 SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 260 TLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVR 319
T++ + + AL + E+M+ GC+ + N ++HG CK R+ +A + M +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 320 -GFTPDDITYGVLMHGLCRTGRVDEA----RALLNKIPSANVVLLNTVINGYVISGRFDE 374
GF PD T+ L++GLC+ G V A +L + +V N+VI+G G E
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 375 AKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILV 434
A + D M++ C P+ T+N LI LCK+ + A EL + KG P++ T+ L+
Sbjct: 349 AVEVL-DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 435 DGFCKEGQLEKANIIINEMLAKGL------------SLNTGDRIEEALGLYQDMLLEGVT 482
G C A + EM +KG SL + +++EAL + + M L G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 483 ANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGL 542
+ +TYNTLI F + EA ++ ++M G + +TYN LI LC + V+ L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 543 FEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCK 602
++M+ +G KP + N L+ CR A + ++ M G PDIVTY +LI+GLCK
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 603 MGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDAT 662
G ++ A L +Q +GI YN +I F++ +A + + + P DA
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 663 WYILV 667
Y +V
Sbjct: 648 SYRIV 652
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 228/499 (45%), Gaps = 41/499 (8%)
Query: 191 VLDVLVAGNCHKVAPNLFYDMLSK--GISPTVYTFGVVMKALCMVNEVDSACSLLRDMTK 248
+LD L + A LF ++ SK SP + ++ L D +L DM
Sbjct: 53 LLDSLRSQPDDSAALRLF-NLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 249 HGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMI-LMGCTSDVQTFNDVIHGLCKVNRIH 307
C + + LI + ++ E L +++ MI G D +N +++ L N +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL- 170
Query: 308 EAAKLVD----RMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVV----LL 359
KLV+ +M V G PD T+ VL+ LCR ++ A +L +PS +V
Sbjct: 171 ---KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 360 NTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMA 419
TV+ GY+ G D A I + M+ GC + N+++HG CK+ R AL + M+
Sbjct: 228 TTVMQGYIEEGDLDGALRI-REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 420 VK-GCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
+ G P+ T+ LV+G CK G ++ A I++ ML
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ----------------------- 323
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
EG + TYN++I + G + EA ++++ M+ R C + +TYN LI LC V++
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
L + KGI P + N LI GLC TR A+E +M +G PD TYN LI+
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVP 658
LC G + EALN+ +++ G +TYNTLI K +A I + +G
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 659 NDATWYILVRNLVKEINME 677
N T+ L+ L K +E
Sbjct: 504 NSVTYNTLIDGLCKSRRVE 522
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 199/441 (45%), Gaps = 59/441 (13%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
+LD C P +YN ++ L N + A L + SKGI P V TF +++ LC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ A L +M GC P+ Y LI +L ++ EAL +L++M L GC V
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T+N +I G CK N+ EA ++ D M V G + + +TY L+ GLC++ RV++A L+
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM--- 528
Query: 352 PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSA 411
D M+ G PD +T+N L+ C+ A
Sbjct: 529 -----------------------------DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 412 LELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALG 471
++V AM GCEP+IVTY L+ G CK G++E A+ ++ + KG++L
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH-------- 611
Query: 472 LYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRG-CPLDEITYNGLIKAL 530
YN +I R+ EA L +ML + P D ++Y + + L
Sbjct: 612 ---------------AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 531 CNAGA-VDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPD 589
CN G + + + E++ KG P S +L GL T ++ + ++ + +
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSE 716
Query: 590 IVTYNSLINGLCKMGCIQEAL 610
S++ GL K+ Q+AL
Sbjct: 717 EEV--SMVKGLLKIRKFQDAL 735
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/609 (29%), Positives = 300/609 (49%), Gaps = 25/609 (4%)
Query: 78 KITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVL 137
+I + K LR V ++ F + + HT + V+I KL + + + +L
Sbjct: 40 EIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLL 99
Query: 138 LQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVA 197
QMK +G C E LFI ++ Y + G+ +A + +K +GC P+ + YN VLD L+
Sbjct: 100 QQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLG 158
Query: 198 GNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVV 257
N ++ ++ DM G P V+T+ V++KALC N+VD A LL +M+ GC P++V
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218
Query: 258 YQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRML 317
Y T+I ++ + V E L E V +N +I+GLCK + A +L+ M+
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 318 VRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFD 373
+G +P+ I+Y L++ LC +G+++ A + L ++ N+ L++++ G + G
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 374 EAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTIL 433
+A ++ + G P+V +N L+ G C A+ + + M GC PNI TY L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 434 VDGFCKEGQLEKANIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGV 481
++GF K G L+ A I N+ML G N + +EA L + M E
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 482 TANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRG-CPLDEITYNGLIKALCNAGAVDKGL 540
+ T+N I G L A K+ M + CP + +TYN L+ L A +++
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 541 GLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGL 600
GL E+ +G++ SS + N L++G C AL+ + M+ G +PD +T N +I
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 601 CKMGCIQEALNLFDKLQA--EGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVP 658
CK G + A + D + PD ++Y +I + +D ++L + ++ G VP
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 659 NDATWYILV 667
+ ATW +L+
Sbjct: 634 SIATWSVLI 642
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 172/364 (47%), Gaps = 13/364 (3%)
Query: 321 FTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRFDEAK 376
F +T+ V++ L G+VD + LL ++ + L +VI+ Y G + A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 377 AIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDG 436
+FY + GC P V +N ++ L + R + M G EPN+ TY +L+
Sbjct: 132 EMFY-RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 190
Query: 437 FCKEGQLEKANIIINEMLAKG-----LSLNTGDRIEEALGLYQD--MLLEGVTANTVTYN 489
CK +++ A ++ EM KG +S T +GL ++ L E YN
Sbjct: 191 LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYN 250
Query: 490 TLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRK 549
LI+ + A +L+ +M+ +G + I+Y+ LI LCN+G ++ +M+++
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 550 GIKPSSISCNILINGLCRTRKANTALEFLRDMIHR-GLTPDIVTYNSLINGLCKMGCIQE 608
G P+ + + L+ G AL+ MI GL P++V YN+L+ G C G I +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 609 ALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVR 668
A+++F ++ G P+ TY +LI+ K G D A I +K + +G PN + +V
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 669 NLVK 672
L +
Sbjct: 431 ALCR 434
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 183/391 (46%), Gaps = 13/391 (3%)
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
TF +I L ++ L+ +M ++GF + + ++ + G + A + +I
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 352 PS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+V + N V++ + R ++ D M G P+VFT+N+L+ LCK +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRD-MKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFC-----KEGQ--LEKANIIINEMLAKGLSL 460
A +L+ M+ KGC P+ V+YT ++ C KEG+ E+ +++ A L
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 461 NTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
+ A L ++M+ +G++ N ++Y+TLI+ G + A + ML RGC +
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRK-GIKPSSISCNILINGLCRTRKANTALEFLR 579
T + L+K G L L+ +M+R G++P+ ++ N L+ G C A+
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 580 DMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEG 639
M G +P+I TY SLING K G + A+ +++K+ G P+ V Y ++ +
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHS 436
Query: 640 LFDDAFLILHKGVANGFVPNDATWYILVRNL 670
F +A ++ P+ T+ ++ L
Sbjct: 437 KFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 156/367 (42%), Gaps = 51/367 (13%)
Query: 117 YYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFIL--IMKYYGRGGVPGQATRLLLD 174
Y LI+ L + + ++ S L QM + G C +++ L ++K G A L
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRG--CHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 175 MKSVYGCQPTFRSYNVVLDVLVA-GNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMV 233
M +G QP +YN ++ + GN K A ++F M G SP + T+G ++
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVK-AVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 234 NEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTF 293
+D A + M GC PN VVY ++ AL + ++ EA L+E M C V TF
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 294 NDVIHGLC------------------------------------KVNRIHEAAKLVDRML 317
N I GLC K NRI EA L +
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Query: 318 VRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI----PSANVVLLNTVINGYVISGRFD 373
+RG TY L+HG C G A L+ K+ S + + +N +I Y G+ +
Sbjct: 521 MRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAE 580
Query: 374 EAKAIFYDSMLSVG---CIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTY 430
A + ++S G PDV ++ +I GLC+ + L+ M G P+I T+
Sbjct: 581 RAAQML--DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 431 TILVDGF 437
++L++ F
Sbjct: 639 SVLINCF 645
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 7/226 (3%)
Query: 452 EMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDM 511
E++ + L+++ +++ L Q M L+G + + ++I + + G A ++ +
Sbjct: 80 EVMIRKLAMD--GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 512 LFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKA 571
GC YN ++ L + ++ +M R G +P+ + N+L+ LC+ K
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 572 NTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTL 631
+ A + L +M ++G PD V+Y ++I+ +C++G ++E L AE P YN L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNAL 252
Query: 632 ISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINME 677
I+ KE + AF ++ + V G PN ++ L+ L +E
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 279/507 (55%), Gaps = 17/507 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ +N +L + N + +L M + IS +Y++ +++ C +++ A ++
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ R+SEA+ L+++M +M + TFN +IHGL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVL 358
N+ EA L+DRM+ RG PD TYG +++GLC+ G +D A +LL K+ A+VV+
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
T+I+ ++A +F + M + G P+V T+N LI LC R+ A L++ M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG----DRI 466
+ PN+VT++ L+D F KEG+L +A + +EM+ + + SL G DR+
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
+EA +++ M+ + N VTYNTLI F + + E +L +M RG + +TYN L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I+ L AG D +F++M+ G+ P I+ +IL++GLC+ K AL + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
PDI TYN +I G+CK G +++ +LF L +G+ P+ + Y T+IS ++GL ++A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKE 673
+ + +G +PN T+ L+R +++
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRD 583
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 240/464 (51%), Gaps = 18/464 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
++D A L +M + +P+ V + L+ A++K N+ + L E M + + D+ ++N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI--- 351
+I+ C+ +++ A ++ +M+ G+ PD +T L++G C R+ EA AL++++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 352 -PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
N V NT+I+G + + EA A+ D M++ GC PD+FT+ +++GLCK+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALI-DRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGD------ 464
AL L+ M E ++V YT ++D C + A + EM KG+ N
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 465 ------RIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
R +A L DM+ + N VT++ LI AF++ G L EA KL ++M+ R
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
D TY+ LI C +D+ +FE M+ K P+ ++ N LI G C+ ++ +E
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
R+M RGL + VTYN+LI GL + G A +F K+ ++G+ PD +TY+ L+ K
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES-WNF 681
G + A ++ + P+ T+ I++ + K +E W+
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 234/479 (48%), Gaps = 29/479 (6%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D V QP ++N ++ L N A L M+++G P ++T+G V+ LC
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
++D A SLL+ M K + V+Y T+I AL V++AL L EM G +V
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T+N +I LC R +A++L+ M+ R P+ +T+ L+ + G++ EA L +++
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 352 PS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
++ +++ING+ + R DEAK +F + M+S C P+V T+N LI G CK +R
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
+EL M+ +G N VTY L+ G + G + A I +M++
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS------------ 458
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
+GV + +TY+ L+ + G L +A + + D TYN +I
Sbjct: 459 -----------DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLT 587
+ +C AG V+ G LF + KG+KP+ I +I+G CR A R+M G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 588 PDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
P+ TYN+LI + G + L ++++ G DA T + +I+ +G + ++L
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSYL 625
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 280/512 (54%), Gaps = 17/512 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ ++ +L + N V +L M + GI YT+ +++ C +++ A ++
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G PN V +L++ S R+SEA+ L+++M + G + TFN +IHGL
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSAN----VVL 358
N+ EA L+DRM+ +G PD +TYGV+++GLC+ G D A LLNK+ V++
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+I+G D+A +F + M + G P+V T++ LI LC R+ A L++ M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKE-METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG----DRI 466
+ P++ T++ L+D F KEG+L +A + +EM+ + + SL G DR+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
+EA +++ M+ + + VTYNTLI F + + E ++ +M RG + +TYN L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I+ L AG D +F+EM+ G+ P+ ++ N L++GLC+ K A+ + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
P I TYN +I G+CK G +++ +LF L +G+ PD V YNT+IS ++G ++A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKEINMES 678
+ + +G +PN + L+R +++ + E+
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 181/633 (28%), Positives = 293/633 (46%), Gaps = 45/633 (7%)
Query: 23 PSFVFF-SFGFSNSCTIDYSNCTARSICQSNDSESENEWERLLKPFDLNELRKSLHKITP 81
PSF FF FS + DY +R + SE + + + F E+ KS +
Sbjct: 30 PSFSFFWRRAFSGKTSYDYREKLSR------NGLSELKLDDAVALF--GEMVKSRPFPSI 81
Query: 82 FQLCKLLRLPLDVDTSMEIFTWAGSQE---GYCHTFDVYYVLIDKLGANKEFKVIDSVLL 138
+ KLL ++ ++ G Q G H Y +LI+ + + +VL
Sbjct: 82 IEFSKLLSAIAKMN-KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 139 QMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAG 198
+M + G ++ Y +A L+D V G QP ++N ++ L
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAV-ALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 199 NCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVY 258
N A L M++KG P + T+GVV+ LC + D A +LL M + P ++Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 259 QTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLV 318
T+I L K + +AL L +EM G +V T++ +I LC R +A++L+ M+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 319 RGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDE 374
R PD T+ L+ + G++ EA L +++ ++V +++ING+ + R DE
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 375 AKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILV 434
AK +F + M+S C PDV T+N LI G CK +R +E+ M+ +G N VTY IL+
Sbjct: 380 AKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 435 DGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHA 494
G + G + A I EM++ +GV N +TYNTL+
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVS-----------------------DGVPPNIMTYNTLLDG 475
Query: 495 FLRRGSLHEAHKLVNDMLFRGCPLDEI-TYNGLIKALCNAGAVDKGLGLFEEMMRKGIKP 553
+ G L +A +V + L R I TYN +I+ +C AG V+ G LF + KG+KP
Sbjct: 476 LCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 554 SSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLF 613
++ N +I+G CR A ++M G P+ YN+LI + G + + L
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 614 DKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
++++ G DA T L++ +G D +FL
Sbjct: 595 KEMRSCGFAGDASTIG-LVTNMLHDGRLDKSFL 626
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 201/430 (46%), Gaps = 31/430 (7%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D GCQP +Y VV++ L +A NL M + P V + ++ LC
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+D A +L ++M G PN V Y +LI L R S+A LL +MI DV
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
TF+ +I K ++ EA KL D M+ R P +TY L++G C R+DEA+ + +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 352 PS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
S +VV NT+I G+ R +E +F + M G + + T+NILI GL +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE-MSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA-------------------NI 448
A E+ M G PNI+TY L+DG CK G+LEKA NI
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 449 IINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLV 508
+I M G ++E+ L+ ++ L+GV + V YNT+I F R+GS EA L
Sbjct: 507 MIEGMCKAG-------KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 509 NDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRT 568
+M G + YN LI+A G + L +EM G + + ++ N L
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Query: 569 RKANTALEFL 578
R + L+ L
Sbjct: 620 RLDKSFLDML 629
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%)
Query: 465 RIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYN 524
++++A+ L+ +M+ + + ++ L+ A + L M G P + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 525 GLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHR 584
LI C + L + +MM+ G +P+ ++ + L+NG C +++ + A+ + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 585 GLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDA 644
G P+ VT+N+LI+GL EA+ L D++ A+G PD VTY +++ K G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 645 FLILHKGVANGFVPNDATWYILVRNLVKEINME 677
F +L+K P + ++ L K +M+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/508 (32%), Positives = 278/508 (54%), Gaps = 19/508 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ ++ +L + N + +L M + GIS +YT+ + + C +++ A ++
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ NR+SEA+ L+++M+ MG D TF ++HGL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVL 358
N+ EA LV+RM+V+G PD +TYG +++GLC+ G D A LLNK+ A+VV+
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+I+G D+A +F + M + G PDVFT+N LI LC R+ A L++ M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLF-NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG------LSLNT-------GDR 465
K P++V + L+D F KEG+L +A + +EM+ ++ NT R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 466 IEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNG 525
+EE + ++++M G+ NTVTY TLIH F + A + M+ G D +TYN
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 526 LIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRG 585
L+ LCN G V+ L +FE M ++ +K ++ +I LC+ K + + +G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 586 LTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAF 645
+ P++VTY ++++G C+ G +EA LF +++ +G P++ TYNTLI ++G +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 646 LILHKGVANGFVPNDATWYILVRNLVKE 673
++ + + GF DA+ + LV N++ +
Sbjct: 552 ELIKEMRSCGFA-GDASTFGLVTNMLHD 578
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 239/456 (52%), Gaps = 18/456 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
++D A L DM K P+ V + L+ A++K N+ + L E+M +G + ++ T++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP-- 352
I+ C+ +++ A ++ +M+ G+ P +T L++G C R+ EA AL++++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 353 --SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
+ V T+++G + EA A+ + M+ GC PD+ T+ +I+GLCK+
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALV-ERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS----------- 459
AL L+N M E ++V Y ++DG CK ++ A + N+M KG+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 460 -LNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDML-FRGCP 517
L R +A L DML + + + V +N LI AF++ G L EA KL ++M+ + C
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 518 LDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEF 577
D + YN LIK C V++G+ +F EM ++G+ ++++ LI+G + R + A
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 578 LRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFK 637
+ M+ G+ PDI+TYN L++GLC G ++ AL +F+ +Q + D VTY T+I K
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 638 EGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
G +D + + G PN T+ ++ ++
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 149/578 (25%), Positives = 248/578 (42%), Gaps = 50/578 (8%)
Query: 43 CTARSIC-QSNDSESENEWERLLKPFDLNE---LRKSLHKITPF----QLCKLLRLPLDV 94
C RS S+D EN ++L+ L++ L + K PF + KLL +
Sbjct: 29 CWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM 88
Query: 95 DTSMEIFTWAGSQE---GYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEG----IIC 147
+ ++ G Q G H Y + I+ + + ++L +M + G I+
Sbjct: 89 N-KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVT 147
Query: 148 RESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNL 207
SL + + G +A L+ M + G QP ++ ++ L N A L
Sbjct: 148 LNSL----LNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 208 FYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSK 267
M+ KG P + T+G V+ LC E D A +LL M K + V+Y T+I L K
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 268 SNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDIT 327
+ +A L +M G DV T+N +I LC R +A++L+ ML + PD +
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 328 YGVLMHGLCRTGRVDEARALLNKIPSA-----NVVLLNTVINGYVISGRFDEAKAIFYDS 382
+ L+ + G++ EA L +++ + +VV NT+I G+ R +E +F +
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE- 381
Query: 383 MLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQ 442
M G + + T+ LIHG + R +A + M G P+I+TY IL+DG C G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 443 LEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLH 502
+E A ++ M + + L + VTY T+I A + G +
Sbjct: 442 VETALVVFEYMQKRDMKL-----------------------DIVTYTTMIEALCKAGKVE 478
Query: 503 EAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILI 562
+ L + +G + +TY ++ C G ++ LF EM G P+S + N LI
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 563 NGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGL 600
R + E +++M G D T+ + N L
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 278/563 (49%), Gaps = 34/563 (6%)
Query: 150 SLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCH-KVAPNLF 208
S+F L++K Y R + +A ++ + +G P SYN VLD + + A N+F
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 209 YDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKS 268
+ML +SP V+T+ ++++ C +D A +L M GC+PN V Y TLI K
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 269 NRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITY 328
++ + LL M L G ++ ++N VI+GLC+ R+ E + ++ M RG++ D++TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 329 GVLMHGLCRTGRVDEA----RALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSML 384
L+ G C+ G +A +L + +V+ ++I+ +G + A F D M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMR 372
Query: 385 SVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLE 444
G P+ T+ L+ G ++ A ++ M G P++VTY L++G C G++E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 445 KANIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVTYNTLI 492
A ++ +M KGLS + ++EAL + ++M+ +G+ +T+TY++LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 493 HAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIK 552
F + EA L +ML G P DE TY LI A C G ++K L L EM+ KG+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 553 PSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYN---------------SLI 597
P ++ ++LINGL + + A L + + P VTY+ SLI
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 598 NGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFV 657
G C G + EA +F+ + + PD YN +I H + G A+ + + V +GF+
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 658 PNDATWYILVRNLVKEINMESWN 680
+ T LV+ L KE + N
Sbjct: 673 LHTVTVIALVKALHKEGKVNELN 695
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 226/440 (51%), Gaps = 53/440 (12%)
Query: 286 CTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGR----- 340
C S F+ V+ +++ I +A +V GF P ++Y ++ R+ R
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 341 VDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIH 400
+ + +L S NV N +I G+ +G D A +F D M + GC+P+V T+N LI
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF-DKMETKGCLPNVVTYNTLID 248
Query: 401 GLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSL 460
G CK R+ +L+ +MA+KG EPN+++Y ++++G C+EG++++ + ++ EM +G SL
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 461 N------------TGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLV 508
+ +AL ++ +ML G+T + +TY +LIH+ + G+++ A + +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 509 NDMLFRG-CPLDE----------------------------------ITYNGLIKALCNA 533
+ M RG CP + +TYN LI C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 534 GAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTY 593
G ++ + + E+M KG+ P +S + +++G CR+ + AL R+M+ +G+ PD +TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 594 NSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVA 653
+SLI G C+ +EA +L++++ G+ PD TY LI+ + EG + A + ++ V
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 654 NGFVPNDATWYILVRNLVKE 673
G +P+ T+ +L+ L K+
Sbjct: 549 KGVLPDVVTYSVLINGLNKQ 568
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 253/524 (48%), Gaps = 42/524 (8%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNC--HKVAP--NLFYDMLSKGISPTVYTFGVVM 227
L D GC P +YN ++D G C K+ L M KG+ P + ++ VV+
Sbjct: 227 LFDKMETKGCLPNVVTYNTLID----GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 228 KALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCT 287
LC + +L +M + G + V Y TLI K +AL++ EM+ G T
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 288 SDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARAL 347
V T+ +IH +CK ++ A + +D+M VRG P++ TY L+ G + G ++EA +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 348 LNKIP----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLC 403
L ++ S +VV N +ING+ ++G+ ++A A+ D M G PDV +++ ++ G C
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED-MKEKGLSPDVVSYSTVLSGFC 461
Query: 404 KQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT- 462
+ AL + M KG +P+ +TY+ L+ GFC++ + ++A + EML GL +
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 463 ------------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVND 510
GD +E+AL L+ +M+ +GV + VTY+ LI+ ++ EA +L+
Sbjct: 522 TYTALINAYCMEGD-LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 511 MLFRGCPLDEITYN---------------GLIKALCNAGAVDKGLGLFEEMMRKGIKPSS 555
+ + ++TY+ LIK C G + + +FE M+ K KP
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 556 ISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDK 615
+ NI+I+G CR A ++M+ G VT +L+ L K G + E ++
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700
Query: 616 LQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPN 659
+ +A L+ + +EG D +L + +GF+PN
Sbjct: 701 VLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 203/428 (47%), Gaps = 37/428 (8%)
Query: 198 GNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVV 257
GN H+ A + +ML G++P+V T+ ++ ++C ++ A L M G PN
Sbjct: 324 GNFHQ-ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 258 YQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRML 317
Y TL+ S+ ++EA +L EM G + V T+N +I+G C ++ +A +++ M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 318 VRGFTPDDITYGVLMHGLCRTGRVDEA----RALLNKIPSANVVLLNTVINGYVISGRFD 373
+G +PD ++Y ++ G CR+ VDEA R ++ K + + +++I G+ R
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 374 EAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTIL 433
EA Y+ ML VG PD FT+ LI+ C + AL+L N M KG P++VTY++L
Sbjct: 503 EA-CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 434 VDGFCKEGQLEKANIIINEM-----------------------------LAKGLSLNTGD 464
++G K+ + +A ++ ++ L KG +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK--G 619
Query: 465 RIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYN 524
+ EA +++ ML + + YN +IH R G + +A+ L +M+ G L +T
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 525 GLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHR 584
L+KAL G V++ + ++R + +L+ R + L+ L +M
Sbjct: 680 ALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739
Query: 585 GLTPDIVT 592
G P+ ++
Sbjct: 740 GFLPNGIS 747
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 476 MLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGA 535
+L E V A T+ +A L SL E + L C ++ ++K+
Sbjct: 101 ILAEDVAAKTLDDE---YASLVFKSLQETYDL--------CYSTSSVFDLVVKSYSRLSL 149
Query: 536 VDKGLGLFEEMMRKGIKPSSISCNILINGLCRT-RKANTALEFLRDMIHRGLTPDIVTYN 594
+DK L + G P +S N +++ R+ R + A ++M+ ++P++ TYN
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 595 SLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVAN 654
LI G C G I AL LFDK++ +G P+ VTYNTLI + K DD F +L
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 655 GFVPNDATWYILVRNLVKEINMESWNF 681
G PN ++ +++ L +E M+ +F
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSF 296
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 280/547 (51%), Gaps = 65/547 (11%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D ++ + Y++VLD+ C + M KGI+ +YT +++ C
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDL-----CKQ--------MELKGIAHNLYTLSIMINCCC 118
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
++ A S + + K G P++V + TLI+ L RVSEAL L++ M+ MG +
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYG---------------------- 329
T N +++GLC ++ +A L+DRM+ GF P+++TYG
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 330 -------------VLMHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRF 372
+++ GLC+ G +D A L N++ A++++ T+I G+ +GR+
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 373 DEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTI 432
D+ + D M+ PDV F+ LI K+ + A EL M +G P+ VTYT
Sbjct: 299 DDGAKLLRD-MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 433 LVDGFCKEGQLEKANIIINEMLAKGLSLN------------TGDRIEEALGLYQDMLLEG 480
L+DGFCKE QL+KAN +++ M++KG N + I++ L L++ M L G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 481 VTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGL 540
V A+TVTYNTLI F G L A +L +M+ R D ++Y L+ LC+ G +K L
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 541 GLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGL 600
+FE++ + ++ NI+I+G+C K + A + + +G+ PD+ TYN +I GL
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 601 CKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPND 660
CK G + EA LF K++ +G P+ TYN LI H EG + ++ + GF +
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Query: 661 ATWYILV 667
+T ++V
Sbjct: 598 STVKMVV 604
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 222/430 (51%), Gaps = 17/430 (3%)
Query: 237 DSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDV 296
D A L ++MT+ P + + L ++++ + L L ++M L G ++ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 297 IHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI----P 352
I+ C+ ++ A + +++ G+ PD +T+ L++GLC GRV EA L++++
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 353 SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSAL 412
++ LN ++NG ++G+ +A + D M+ G P+ T+ ++ +CK + A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDA-VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 413 ELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT---------- 462
EL+ M + + + V Y+I++DG CK+G L+ A + NEM KG +
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 463 --GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
R ++ L +DM+ +T + V ++ LI F++ G L EA +L +M+ RG D
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRD 580
+TY LI C +DK + + M+ KG P+ + NILING C+ + LE R
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 581 MIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGL 640
M RG+ D VTYN+LI G C++G ++ A LF ++ + + PD V+Y L+ G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 641 FDDAFLILHK 650
+ A I K
Sbjct: 473 PEKALEIFEK 482
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 199/424 (46%), Gaps = 17/424 (4%)
Query: 171 LLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKAL 230
LL+D G QP +Y VL V+ +A L M + I + +++ L
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 231 CMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDV 290
C +D+A +L +M G + ++Y TLI + R + LL +MI T DV
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 291 QTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNK 350
F+ +I K ++ EA +L M+ RG +PD +TY L+ G C+ ++D+A +L+
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 351 IPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQR 406
+ S N+ N +INGY + D+ +F L G + D T+N LI G C+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELG 436
Query: 407 RFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTG--- 463
+ A EL M + P+IV+Y IL+DG C G+ EKA I ++ + L+ G
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 464 ---------DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFR 514
++++A L+ + L+GV + TYN +I ++GSL EA L M
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 515 GCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTA 574
G + TYN LI+A G K L EE+ R G + + ++++ L R +
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
Query: 575 LEFL 578
L+ L
Sbjct: 617 LDML 620
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 23/294 (7%)
Query: 387 GCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA 446
G +++T +I+I+ C+ R+ A + + G EP+ VT++ L++G C EG
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG----- 156
Query: 447 NIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHK 506
R+ EAL L M+ G +T N L++ G + +A
Sbjct: 157 ------------------RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 507 LVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLC 566
L++ M+ G +E+TY ++K +C +G + L +M + IK ++ +I+I+GLC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 567 RTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAV 626
+ + A +M +G DI+ Y +LI G C G + L + I PD V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 627 TYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMESWN 680
++ LI KEG +A + + + G P+ T+ L+ KE ++ N
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%)
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
++A+ L+Q+M + ++ L R L M +G + T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I C + ++++ G +P +++ + LINGLC + + ALE + M+ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
P ++T N+L+NGLC G + +A+ L D++ G P+ VTY ++ K G A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKEINMES 678
+L K + + I++ L K+ ++++
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 277/507 (54%), Gaps = 17/507 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ +N +L + + +L M GIS +YT+ +++ C +++ A +L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ R+S+A+ L+++M+ MG D TF +IHGL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVL 358
N+ EA LVDRM+ RG P+ +TYGV+++GLC+ G +D A LLNK+ +A +VV+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+I+ D+A +F + M + G P+V T++ LI LC R+ A +L++ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKE-METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG----DRI 466
K PN+VT+ L+D F KEG+ +A + ++M+ + + SL G DR+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
++A +++ M+ + + TYNTLI F + + + +L +M RG D +TY L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I+ L + G D +F++M+ G+ P ++ +IL++GLC K ALE M +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
DI Y ++I G+CK G + + +LF L +G+ P+ VTYNT+IS + L +A+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKE 673
+L K +G +P+ T+ L+R +++
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 213/401 (53%), Gaps = 17/401 (4%)
Query: 293 FNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP 352
FN ++ + K+ + L ++M G + + TY +L++ CR ++ A ALL K+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 353 ----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRF 408
++V L++++NGY R +A A+ D M+ +G PD TF LIHGL +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 409 GSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL---------- 458
A+ LV+ M +GC+PN+VTY ++V+G CK G ++ A ++N+M A +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 459 --SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGC 516
SL +++AL L+++M +G+ N VTY++LI G +A +L++DM+ +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 517 PLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALE 576
+ +T+N LI A G + L ++M+++ I P + N LING C + + A +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 577 FLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHF 636
M+ + PD+ TYN+LI G CK +++ LF ++ G+ D VTY TLI F
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 637 KEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINME 677
+G D+A + + V++G P+ T+ IL+ L +E
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 275/507 (54%), Gaps = 17/507 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ +N +L + V +L M I +YT+ +++ C +++ A +L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ R+S+A+ L+++M+ MG D TF +IHGL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVL 358
N+ EA LVDRM+ RG P+ +TYGV+++GLC+ G D A LLNK+ +A +VV+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+I+ D+A +F + M + G P+V T++ LI LC R+ A +L++ M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKE-METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG----DRI 466
K PN+VT+ L+D F KEG+ +A + ++M+ + + SL G DR+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
++A +++ M+ + + VTYNTLI F + + + +L +M RG D +TY L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I+ L + G D +F++M+ G+ P ++ +IL++GLC K ALE M +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
DI Y ++I G+CK G + + +LF L +G+ P+ VTYNT+IS + L +A+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKE 673
+L K +G +PN T+ L+R +++
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRD 588
Score = 262 bits (669), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 259/528 (49%), Gaps = 37/528 (7%)
Query: 120 LIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVY 179
L+ + K+F V+ S+ +M+ I+ + +++ + R A LL M +
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKL- 149
Query: 180 GCQPTFRSYNVVLDVLVAGNCH----KVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNE 235
G +P+ V L L+ G CH A L M+ G P TF ++ L + N+
Sbjct: 150 GYEPSI----VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 236 VDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFND 295
A +L+ M + GC PN V Y +++ L K AL LL +M +DV FN
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLN----KI 351
+I LCK + +A L M +G P+ +TY L+ LC GR +A LL+ K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 352 PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSA 411
+ N+V N +I+ +V G+F EA+ + YD M+ PD+FT+N L++G C R A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKL-YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 412 LELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALG 471
++ M K C P++VTY L+ GFCK R+E+
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKS-----------------------KRVEDGTE 421
Query: 472 LYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALC 531
L+++M G+ +TVTY TLI G A K+ M+ G P D +TY+ L+ LC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 532 NAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIV 591
N G ++K L +F+ M + IK +I G+C+ K + + + +G+ P++V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 592 TYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEG 639
TYN++I+GLC +QEA L K++ +G P++ TYNTLI H ++G
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 230/459 (50%), Gaps = 52/459 (11%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
++D A L M K +P+ V + L+ A++K + + L E+M +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL---------- 114
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP-- 352
+++HGL TY +L++ CR ++ A ALL K+
Sbjct: 115 EIVHGL-------------------------YTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 353 --SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
++V L++++NGY R +A A+ D M+ +G PD TF LIHGL +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL------------ 458
A+ LV+ M +GC+PN+VTY ++V+G CK G + A ++N+M A +
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 459 SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
SL +++AL L+++M +G+ N VTY++LI G +A +L++DM+ +
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
+ +T+N LI A G + L+++M+++ I P + N L+NG C + + A +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
M+ + PD+VTYN+LI G CK +++ LF ++ G+ D VTY TLI F +
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINME 677
G D+A + + V++G P+ T+ IL+ L +E
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 271/496 (54%), Gaps = 17/496 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ +N +L + + +L M GIS +YT+ +++ C +++ A +L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ R+S+A+ L+++M+ MG D TF +IHGL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVL 358
N+ EA LVDRM+ RG P+ +TYGV+++GLC+ G +D A LLNK+ +A NVV+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
+TVI+ D+A +F + M + G P+V T++ LI LC R+ A L++ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTE-MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG----DRI 466
+ PN+VT+ L+D F KEG+L +A + +EM+ + + SL G DR+
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
+EA +++ M+ + N VTYNTLI+ F + + E +L +M RG + +TY L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I A D +F++M+ G+ P+ ++ N L++GLC+ K A+ + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
P I TYN +I G+CK G +++ +LF L +G+ PD + YNT+IS ++GL ++A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 647 ILHKGVANGFVPNDAT 662
+ K +G +P+ T
Sbjct: 562 LFRKMREDGPLPDSGT 577
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 239/464 (51%), Gaps = 18/464 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
++D A L M K +P+ + L+ A++K + + L E+M +G + ++ T+N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS- 353
+I+ C+ ++I A L+ +M+ G+ P +T L++G C R+ +A AL++++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 354 ---ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
+ + T+I+G + + EA A+ D M+ GC P++ T+ ++++GLCK+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT-------- 462
A L+N M E N+V Y+ ++D CK + A + EM KG+ N
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 463 ----GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
+R +A L DM+ + N VT+N LI AF++ G L EA KL ++M+ R
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
D TY+ LI C +D+ +FE M+ K P+ ++ N LING C+ ++ + +E
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
R+M RGL + VTY +LI+G + A +F ++ ++G++P+ +TYNTL+ K
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES-WNF 681
G + A ++ + P T+ I++ + K +E W+
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 228/436 (52%), Gaps = 17/436 (3%)
Query: 258 YQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRML 317
Y+ ++ S ++ +A+ L M+ + FN ++ + K+ + L ++M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 318 VRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRFD 373
G + + TY +L++ CR ++ A ALL K+ ++V L++++NGY R
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 374 EAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTIL 433
+A A+ D M+ +G PD TF LIHGL + A+ LV+ M +GC+PN+VTY ++
Sbjct: 173 DAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 434 VDGFCKEGQLEKANIIINEMLAKGLSLNTG------DRI------EEALGLYQDMLLEGV 481
V+G CK G ++ A ++N+M A + N D + ++AL L+ +M +GV
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 482 TANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLG 541
N +TY++LI +A +L++DM+ R + +T+N LI A G + +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 542 LFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLC 601
L++EM+++ I P + + LING C + + A MI + P++VTYN+LING C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 602 KMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDA 661
K I E + LF ++ G+ + VTY TLI F+ D+A ++ + V++G PN
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 662 TWYILVRNLVKEINME 677
T+ L+ L K +E
Sbjct: 472 TYNTLLDGLCKNGKLE 487
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 245/528 (46%), Gaps = 44/528 (8%)
Query: 67 FDLNELRKSLHKITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGA 126
F+ N+L ++ K+ F L + + M+ + G H Y +LI+
Sbjct: 86 FEFNKLLSAIAKMKKFDLV------ISLGEKMQ-------RLGISHNLYTYNILINCFCR 132
Query: 127 NKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFR 186
+ + ++L +M + G ++ Y G A L+ M + G +P
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTI 191
Query: 187 SYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDM 246
++ ++ L N A L M+ +G P + T+GVV+ LC ++D A +LL M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 247 TKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRI 306
N V+Y T+I +L K +AL L EM G +V T++ +I LC R
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 307 HEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTV 362
+A++L+ M+ R P+ +T+ L+ + G++ EA L +++ ++ +++
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 363 INGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKG 422
ING+ + R DEAK +F + M+S C P+V T+N LI+G CK +R +EL M+ +G
Sbjct: 372 INGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 423 CEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVT 482
N VTYT L+ GF + + A ++ +M++ +GV
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-----------------------DGVH 467
Query: 483 ANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEI-TYNGLIKALCNAGAVDKGLG 541
N +TYNTL+ + G L +A +V + L R I TYN +I+ +C AG V+ G
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 542 LFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPD 589
LF + KG+KP I N +I+G CR A R M G PD
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/644 (27%), Positives = 303/644 (47%), Gaps = 54/644 (8%)
Query: 79 ITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLL 138
++P + KLL+ + + +F A GY H+ VY+ ++ +L + + ++
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 139 QMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAG 198
++ + C E + + ++K YG+ +P QA + M+ ++GC+P RSYN +L+ V
Sbjct: 68 LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127
Query: 199 NCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVY 258
+LF + G++P + T+ V++K C E + A L M K G P+ Y
Sbjct: 128 KQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSY 187
Query: 259 QTLIHALSKSNRVSEALMLLEEMILMGCTSDV---------------------------- 290
T+I+ L+K+ ++ +AL L +EM G DV
Sbjct: 188 STVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Query: 291 --------QTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVD 342
+T N +I GL K R+ + K+ +RM D TY L+HGLC G VD
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 343 EARALLNKI----PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNIL 398
+A ++ N++ S +VV NT++ G+ G+ E+ ++ ++ ++ ++NIL
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW--RIMEHKNSVNIVSYNIL 365
Query: 399 IHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL 458
I GL + + A + M KG + TY I + G C G + KA ++ E+ + G
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 459 SLNT------------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHK 506
L+ R+EEA L ++M GV N+ N LI +R L EA
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 507 LVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLC 566
+ +M GC ++YN LI LC AG + +EM+ G KP + +IL+ GLC
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 567 RTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAV 626
R RK + ALE + GL D++ +N LI+GLC +G + +A+ + ++ + V
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 627 TYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNL 670
TYNTL+ FK G + A +I G P+ ++ +++ L
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 234/543 (43%), Gaps = 53/543 (9%)
Query: 109 GYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQA 168
G Y VLI KEF+ L M +EG + ++ + G A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 169 TRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLS-KGISPTVYTFGVVM 227
L +M S G P YN+++D + HK A L+ +L + P V T +++
Sbjct: 204 LELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 228 KALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCT 287
L VD + M ++ + Y +LIH L + V +A + E+ +
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 288 SDVQTFNDVIHGLCKVNRIHEAAKL---------------------------VDR----- 315
DV T+N ++ G C+ +I E+ +L +D
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 316 --MLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVLLNTVINGYVIS 369
M +G+ D TYG+ +HGLC G V++A ++ ++ S+ +V ++I+
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 370 GRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVT 429
R +EA + + M G + N LI GL + R G A + M GC P +V+
Sbjct: 443 KRLEEASNLVKE-MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVS 501
Query: 430 YTILVDGFCKEGQLEKANIIINEMLAKGLS------------LNTGDRIEEALGLYQDML 477
Y IL+ G CK G+ +A+ + EML G L +I+ AL L+ L
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 478 LEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVD 537
G+ + + +N LIH G L +A ++ +M R C + +TYN L++ G +
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 538 KGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLI 597
+ ++ M + G++P IS N ++ GLC R + A+EF D + G+ P + T+N L+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Query: 598 NGL 600
+
Sbjct: 682 RAV 684
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 219/465 (47%), Gaps = 22/465 (4%)
Query: 237 DSACSLLRDMTK-HGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFND 295
D A + + M + GC P Y TL++A ++ + + L G ++QT+N
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP--- 352
+I CK +A +D M GF PD +Y +++ L + G++D+A L +++
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 353 -SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSA 411
+ +V N +I+G++ A ++ + P+V T NI+I GL K R
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 412 LELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT--------- 462
L++ M E ++ TY+ L+ G C G ++KA + NE+ + S++
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 463 ---GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLD 519
+I+E+L L++ M + + N V+YN LI L G + EA + M +G D
Sbjct: 335 FCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 520 EITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLR 579
+ TY I LC G V+K LG+ +E+ G + +I+ LC+ ++ A ++
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 580 DMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEG 639
+M G+ + N+LI GL + + EA ++ G P V+YN LI K G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 640 LFDDAFLILHKGVANGFVPNDATWYILVRNLVK----EINMESWN 680
F +A + + + NG+ P+ T+ IL+ L + ++ +E W+
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 217/477 (45%), Gaps = 25/477 (5%)
Query: 226 VMKALCMVNEVDSACSLLRDMTKH-GCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILM 284
V+K L +A +L T+H G ++VVY ++ LS++ V+ ++E +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 285 GCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRML-VRGFTPDDITYGVLMHGLCRTGRVDE 343
C D VI K + +A + RM + G P +Y L++ + +
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 344 ARALLNKIPSA----NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILI 399
+L +A N+ N +I F++A+ F D M G PDVF+++ +I
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG-FLDWMWKEGFKPDVFSYSTVI 191
Query: 400 HGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA------------- 446
+ L K + ALEL + M+ +G P++ Y IL+DGF KE + A
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 447 --NIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEA 504
N+ + ++ GLS R+++ L +++ M + TY++LIH G++ +A
Sbjct: 252 YPNVKTHNIMISGLS--KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 505 HKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILING 564
+ N++ R +D +TYN ++ C G + + L L+ M K + +S NILI G
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKG 368
Query: 565 LCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPD 624
L K + A R M +G D TY I+GLC G + +AL + ++++ G + D
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
Query: 625 AVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMESWNF 681
Y ++I K+ ++A ++ + +G N L+ L+++ + +F
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 129/309 (41%), Gaps = 34/309 (11%)
Query: 94 VDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFI 153
V+ ++ + S G+ + Y +ID L K + +++ +M + G+ +
Sbjct: 410 VNKALGVMQEVESSGGHLDVY-AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 154 LIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLS 213
++ R G+A+ L +M GC+PT SYN+++ L A +ML
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGK-NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 214 KGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSE 273
G P + T+ +++ LC ++D A L + G + +++ LIH L ++ +
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 274 ALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMH 333
A+ ++ M CT+++ T+N ++ G KV + A + M G PD I+Y +M
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 334 GLCRTGRVDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVF 393
GLC V A F+D + G P V+
Sbjct: 648 GLCMCRGVSYAME--------------------------------FFDDARNHGIFPTVY 675
Query: 394 TFNILIHGL 402
T+NIL+ +
Sbjct: 676 TWNILVRAV 684
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 267/516 (51%), Gaps = 71/516 (13%)
Query: 200 CHKVAPNLFYDMLS--------KGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGC 251
C VA YD++ GI +YT +++ C ++ A S+L K G
Sbjct: 77 CSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY 136
Query: 252 VPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAK 311
P+++ + TL++ RVSEA+ L++ M+ M D+ T + +I+GLC R+ EA
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 312 LVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYV 367
L+DRM+ GF PD++TYG +++ LC++G A L K+ A+VV + VI+
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 368 ISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNI 427
G FD+A ++F + M G DV T++ LI GLC ++ +++ M + P++
Sbjct: 257 KDGSFDDALSLF-NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 428 VTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVT 487
VT++ L+D F KEG+L EA LY +M+ G+ +T+T
Sbjct: 316 VTFSALIDVFVKEGKLL-----------------------EAKELYNEMITRGIAPDTIT 352
Query: 488 YNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMM 547
YN+LI F + LHEA+++ + M+ +GC D +TY+ LI + C A VD G+ LF E+
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 548 RKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQ 607
KG+ P++I+ N L+ G C++ K N A E ++M+ RG+ P +VTY L++GLC G +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 608 EALNLFDKLQA-----------------------------------EGIYPDAVTYNTLI 632
+AL +F+K+Q +G+ PD VTYN +I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 633 SWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVR 668
K+G +A ++ K +G P+D T+ IL+R
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 206/424 (48%), Gaps = 17/424 (4%)
Query: 171 LLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKAL 230
+L+D YG QP +Y VL+ L +A +LF M + I +V + +V+ +L
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 231 CMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDV 290
C D A SL +M G + V Y +LI L + + +L EMI DV
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 291 QTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNK 350
TF+ +I K ++ EA +L + M+ RG PD ITY L+ G C+ + EA + +
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 351 IPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQR 406
+ S ++V + +IN Y + R D+ +F + + S G IP+ T+N L+ G C+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE-ISSKGLIPNTITYNTLVLGFCQSG 434
Query: 407 RFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTG--- 463
+ +A EL M +G P++VTY IL+DG C G+L KA I +M ++L G
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 464 ---------DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFR 514
++++A L+ + +GV + VTYN +I ++GSL EA L M
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 515 GCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTA 574
GC D+ TYN LI+A + + L EEM G S + ++I+ L R +
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSF 614
Query: 575 LEFL 578
L+ L
Sbjct: 615 LDML 618
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 169/350 (48%), Gaps = 6/350 (1%)
Query: 117 YYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMK 176
Y ++ID L + F S+ +M+ +GI + ++ G ++L +M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 177 SVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEV 236
P +++ ++DV V A L+ +M+++GI+P T+ ++ C N +
Sbjct: 308 G-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 237 DSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDV 296
A + M GC P+ V Y LI++ K+ RV + + L E+ G + T+N +
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 297 IHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANV 356
+ G C+ +++ A +L M+ RG P +TYG+L+ GLC G +++A + K+ + +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 357 VL----LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSAL 412
L N +I+G + + D+A ++F S+ G PDV T+N++I GLCK+ A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFC-SLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 413 ELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT 462
L M GC P+ TY IL+ L + +I EM G S ++
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Query: 452 EMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDM 511
++L KG SL I EA Y++ L G+ + N I F S+ ++ L
Sbjct: 17 QILEKGTSLLHYSSITEAKLSYKERLRNGIV--DIKVNDAIDLF---ESMIQSRPLPT-- 69
Query: 512 LFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKA 571
P+D +N L A+ D LG + M GI+ + I+IN CR +K
Sbjct: 70 -----PID---FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 572 NTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTL 631
A L G PD +T+++L+NG C G + EA+ L D++ PD VT +TL
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 181
Query: 632 ISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEIN 675
I+ +G +A +++ + V GF P++ T+ ++ L K N
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 274/536 (51%), Gaps = 52/536 (9%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
PT ++ + + + + L M KGI+ +YT +++ C ++ A S
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
+ + K G PN++ + TLI+ L RVSEAL L++ M+ MG D+ T N +++GLC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYG--------------------------------- 329
+ EA L+D+M+ G P+ +TYG
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 330 --VLMHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRFDEAKAIFYDSM 383
+++ GLC+ G +D A L N++ + N++ N +I G+ +GR+D+ + D M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD-M 324
Query: 384 LSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQL 443
+ P+V TF++LI K+ + A EL M +G P+ +TYT L+DGFCKE L
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 444 EKANIIINEMLAKGLSLN------------TGDRIEEALGLYQDMLLEGVTANTVTYNTL 491
+KAN +++ M++KG N +RI++ L L++ M L GV A+TVTYNTL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 492 IHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGI 551
I F G L+ A +L +M+ R P + +TY L+ LC+ G +K L +FE++ + +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 552 KPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALN 611
+ NI+I+G+C K + A + + +G+ P + TYN +I GLCK G + EA
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 612 LFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILV 667
LF K++ +G PD TYN LI H +G + ++ + GF + +T +++
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 229/432 (53%), Gaps = 17/432 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+ D A L RDM +P + + L A++K+ + L L ++M L G ++ T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI--- 351
+I+ C+ ++ A + +++ G+ P+ IT+ L++GLC GRV EA L++++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 352 -PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
+++ +NT++NG +SG+ EA + D M+ GC P+ T+ +++ +CK +
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEA-MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLN--------- 461
A+EL+ M + + + V Y+I++DG CK G L+ A + NEM KG++ N
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 462 ---TGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
R ++ L +DM+ + N VT++ LI +F++ G L EA +L +M+ RG
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
D ITY LI C +DK + + M+ KG P+ + NILING C+ + + LE
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
R M RG+ D VTYN+LI G C++G + A LF ++ + + P+ VTY L+
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 639 GLFDDAFLILHK 650
G + A I K
Sbjct: 487 GESEKALEIFEK 498
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 221/479 (46%), Gaps = 29/479 (6%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D G +P + N +++ L A L M+ G P T+G V+ +C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ A LLR M + ++V Y +I L K + A L EM + G T+++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA----RAL 347
T+N +I G C R + AKL+ M+ R P+ +T+ VL+ + G++ EA + +
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 348 LNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+++ + + + ++I+G+ D+A + D M+S GC P++ TFNILI+G CK R
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
LEL M+++G + VTY L+ GFC+ G+L A
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK-------------------- 458
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
L+Q+M+ V N VTY L+ G +A ++ + LD YN +I
Sbjct: 459 ---ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLT 587
+CNA VD LF + KG+KP + NI+I GLC+ + A R M G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 588 PDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
PD TYN LI G +++ L ++L+ G DA T +I +G +FL
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM-LSDGRLKKSFL 633
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 198/424 (46%), Gaps = 17/424 (4%)
Query: 171 LLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKAL 230
LL+D YGCQP +Y VL+V+ +A L M + I + +++ L
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 231 CMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDV 290
C +D+A +L +M G N + Y LI + R + LL +MI +V
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 291 QTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNK 350
TF+ +I K ++ EA +L M+ RG PD ITY L+ G C+ +D+A +++
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 351 IPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQR 406
+ S N+ N +INGY + R D+ +F L G + D T+N LI G C+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELG 452
Query: 407 RFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTG--- 463
+ A EL M + PNIVTY IL+DG C G+ EKA I ++ + L+ G
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 464 ---------DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFR 514
++++A L+ + L+GV TYN +I ++G L EA L M
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 515 GCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTA 574
G D TYN LI+A G K + L EE+ R G + + ++I+ L R +
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632
Query: 575 LEFL 578
L+ L
Sbjct: 633 LDML 636
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 158/340 (46%), Gaps = 24/340 (7%)
Query: 341 VDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIH 400
+D R +++ P V+ + + + + ++D A+ L G +++T +I+I+
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK-GIAHNLYTLSIMIN 131
Query: 401 GLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSL 460
C+ R+ A + + G EPN +T++ L++G C EG
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG------------------- 172
Query: 461 NTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
R+ EAL L M+ G + +T NTL++ G EA L++ M+ GC +
Sbjct: 173 ----RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRD 580
+TY ++ +C +G + L +M + IK ++ +I+I+GLC+ + A +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 581 MIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGL 640
M +G+T +I+TYN LI G C G + L + I P+ VT++ LI KEG
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 641 FDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMESWN 680
+A + + + G P+ T+ L+ KE +++ N
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%)
Query: 465 RIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYN 524
+ ++A+ L++DM+ + ++ L A + L M +G + T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 525 GLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHR 584
+I C + ++++ G +P++I+ + LINGLC + + ALE + M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 585 GLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDA 644
G PD++T N+L+NGLC G EA+ L DK+ G P+AVTY +++ K G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 645 FLILHKGVANGFVPNDATWYILVRNLVKEINMES 678
+L K + + I++ L K ++++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 268 bits (686), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 271/502 (53%), Gaps = 17/502 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
PT +N + + +++ L M SKGI+ ++YT +++ C ++ A S
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
+ + K G P++V++ TL++ L RVSEAL L++ M+ MG + T N +++GLC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVL---- 358
++ +A L+DRM+ GF P+++TYG +++ +C++G+ A LL K+ N+ L
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
+ +I+G G D A +F + M G D+ T+N LI G C R+ +L+ M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLF-NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------GDRI 466
+ PN+VT+++L+D F KEG+L +A+ ++ EM+ +G++ NT +R+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
EEA+ + M+ +G + +T+N LI+ + + + + +L +M RG + +TYN L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
++ C +G ++ LF+EM+ + ++P +S IL++GLC + ALE + +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
DI Y +I+G+C + +A +LF L +G+ DA YN +IS ++ A +
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 647 ILHKGVANGFVPNDATWYILVR 668
+ K G P++ T+ IL+R
Sbjct: 565 LFRKMTEEGHAPDELTYNILIR 586
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 231/432 (53%), Gaps = 17/432 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+ D A L RDM + +P + + L A++K+ + L L ++M G + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI--- 351
+I+ C+ ++ A + +++ G+ PD + + L++GLC RV EA L++++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 352 -PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
++ LNT++NG ++G+ +A + D M+ G P+ T+ +++ +CK +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDA-VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG-----LSLNT--- 462
A+EL+ M + + + V Y+I++DG CK+G L+ A + NEM KG ++ NT
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 463 ----GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
R ++ L +DM+ ++ N VT++ LI +F++ G L EA +L+ +M+ RG
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
+ ITYN LI C +++ + + + M+ KG P ++ NILING C+ + + LE
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
R+M RG+ + VTYN+L+ G C+ G ++ A LF ++ + + PD V+Y L+
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 639 GLFDDAFLILHK 650
G + A I K
Sbjct: 487 GELEKALEIFGK 498
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 223/479 (46%), Gaps = 29/479 (6%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D G +PT + N +++ L A L M+ G P T+G V+ +C
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ A LLR M + ++V Y +I L K + A L EM + G +D+
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T+N +I G C R + AKL+ M+ R +P+ +T+ VL+ + G++ EA LL ++
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 352 P----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+ N + N++I+G+ R +EA + D M+S GC PD+ TFNILI+G CK R
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANR 418
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
LEL M+++G N VTY LV GFC+ G+LE A
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK-------------------- 458
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
L+Q+M+ V + V+Y L+ G L +A ++ + LD Y +I
Sbjct: 459 ---KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLT 587
+CNA VD LF + KG+K + + NI+I+ LCR + A R M G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 588 PDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
PD +TYN LI A L +++++ G D T +I+ G D +FL
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINM-LSSGELDKSFL 633
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 198/434 (45%), Gaps = 28/434 (6%)
Query: 171 LLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKAL 230
+L+D G QP +Y VL+V+ +A L M + I + +++ L
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 231 CMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDV 290
C +D+A +L +M G + + Y TLI + R + LL +MI + +V
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 291 QTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNK 350
TF+ +I K ++ EA +L+ M+ RG P+ ITY L+ G C+ R++EA +++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 351 IPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQR 406
+ S +++ N +INGY + R D+ +F + L G I + T+N L+ G C+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSG 452
Query: 407 RFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRI 466
+ A +L M + P+IV+Y IL+DG C G+LEKA I ++ + L+ G
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG--- 509
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
Y +IH + +A L + +G LD YN +
Sbjct: 510 --------------------IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I LC ++ K LF +M +G P ++ NILI A TA E + +M G
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Query: 587 TPDIVTYNSLINGL 600
D+ T +IN L
Sbjct: 610 PADVSTVKMVINML 623
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 139/299 (46%), Gaps = 7/299 (2%)
Query: 152 FILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDM 211
F +++ + + G +A +LL +M G P +YN ++D N + A + M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 212 LSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRV 271
+SKG P + TF +++ C N +D L R+M+ G + N+V Y TL+ +S ++
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 272 SEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVL 331
A L +EM+ D+ ++ ++ GLC + +A ++ ++ D Y ++
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 332 MHGLCRTGRVDEARALLNKIPSANVVL----LNTVINGYVISGRFDEAKAIFYDSMLSVG 387
+HG+C +VD+A L +P V L N +I+ +A I + M G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD-ILFRKMTEEG 573
Query: 388 CIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA 446
PD T+NILI +A EL+ M G ++ T ++++ G+L+K+
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN-MLSSGELDKS 631
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 447 NIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHK 506
N+ + L+ GL G + ++A+ L++DM+ + +N L A +
Sbjct: 53 NLSYRDKLSSGL---VGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLA 109
Query: 507 LVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLC 566
L M +G T + +I C + ++M+ G +P ++ N L+NGLC
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 567 RTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAV 626
+ + ALE + M+ G P ++T N+L+NGLC G + +A+ L D++ G P+ V
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 627 TYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES 678
TY +++ K G A +L K + + I++ L K+ ++++
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 265 bits (677), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 271/502 (53%), Gaps = 20/502 (3%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ +N +L + N ++ +L M + GIS +YT+ + + C +++ A ++
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ S R+S+A+ L+++M+ MG D TF +IHGL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVL 358
N+ EA LVD+M+ RG PD +TYG +++GLC+ G +D A LLNK+ + ANVV+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+I+ + R E + M + G P+V T+N LI+ LC R+ A L++ M
Sbjct: 261 FNTIIDS-LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------GDRI 466
K PN+VT+ L+D F KEG+L +A + EM+ + + +T +R+
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
+EA +++ M+ + N TYNTLI+ F + + + +L +M RG + +TY +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
I+ AG D +F++M+ + ++ +IL++GLC K +TAL + + +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
+I YN++I G+CK G + EA +LF L I PD VTYNT+IS + L +A
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 647 ILHKGVANGFVPNDATWYILVR 668
+ K +G +PN T+ L+R
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIR 578
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 234/449 (52%), Gaps = 46/449 (10%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+VD A L DM K P+ V + L+ A++K N+ + L E+M +G + D+ T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA 354
I+ C+ +++ A ++ +M+ G+ PD +T L++G C + R+ +A AL+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV------ 176
Query: 355 NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALEL 414
D M+ +G PD FTF LIHGL + A+ L
Sbjct: 177 --------------------------DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 415 VNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------ 462
V+ M +GC+P++VTY +V+G CK G ++ A ++N+M A + N
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 463 GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEIT 522
+E A+ L+ +M +G+ N VTYN+LI+ G +A +L+++ML + + +T
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 523 YNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMI 582
+N LI A G + + L EEM+++ I P +I+ N+LING C + + A + + M+
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 583 HRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFD 642
+ P+I TYN+LING CK +++ + LF ++ G+ + VTY T+I F+ G D
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 643 DAFLILHKGVANGFVPND-ATWYILVRNL 670
A ++ + V+N VP D T+ IL+ L
Sbjct: 451 SAQMVFKQMVSNR-VPTDIMTYSILLHGL 478
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 226/534 (42%), Gaps = 54/534 (10%)
Query: 73 RKSLHKITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKV 132
R+S + L K+++L + D I T + GYCH+ ++
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPD----IVTLSSLLNGYCHSK----------------RI 169
Query: 133 IDSVLL--QMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNV 190
D+V L QM E G F ++ +A L+ D GCQP +Y
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV-DQMVQRGCQPDLVTYGT 228
Query: 191 VLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHG 250
V++ L +A NL M + I V F ++ +LC V+ A L +M G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 251 CVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAA 310
PN V Y +LI+ L R S+A LL M+ +V TFN +I K ++ EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 311 KLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGY 366
KL + M+ R PD ITY +L++G C R+DEA+ + + S N+ NT+ING+
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 367 VISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPN 426
R ++ +F + M G + + T+ +I G + SA + M +
Sbjct: 409 CKCKRVEDGVELFRE-MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 427 IVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTV 486
I+TY+IL+ G C G+L+ A +I + + L N
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL-----------------------NIF 504
Query: 487 TYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEM 546
YNT+I + G + EA L + + D +TYN +I LC+ + + LF +M
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 547 MRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGL 600
G P+S + N LI R + E +++M G D T + + N L
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 182/359 (50%), Gaps = 17/359 (4%)
Query: 330 VLMHGLCRTGRVDEARALLNKI----PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLS 385
+L + L +VD+A L + P ++V N +++ +F+ ++ + M +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL-GEQMQT 111
Query: 386 VGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEK 445
+G D++T++I I+ C++ + AL ++ M G EP+IVT + L++G+C ++
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 446 ANIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVTYNTLIH 493
A ++++M+ G +T ++ EA+ L M+ G + VTY T+++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 494 AFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKP 553
+RG + A L+N M + + +N +I +LC V+ + LF EM KGI+P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 554 SSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLF 613
+ ++ N LIN LC + + A L +M+ + + P++VT+N+LI+ K G + EA L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 614 DKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
+++ I PD +TYN LI+ D+A + V+ +PN T+ L+ K
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 268/515 (52%), Gaps = 36/515 (6%)
Query: 189 NVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTK 248
N V+ V V N VA +L+ M + I +Y+F +++K C +++ + S +TK
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 249 HGCVPNSVVYQTLIHALSKSNRVSEALMLL---------------EEMILMGCTSDVQTF 293
G P+ V + TL+H L +R+SEAL L ++M+ +G T V TF
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 294 NDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS 353
N +I+GLC R+ EAA LV++M+ +G D +TYG +++G+C+ G A LL+K+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 354 A----NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFG 409
+VV+ + +I+ G +A+ +F + ML G P+VFT+N +I G C R+
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE-MLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 410 SALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------- 462
A L+ M + P+++T+ L+ KEG+L +A + +EML + + +T
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 463 -----GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCP 517
+R ++A ++ M + + VT+NT+I + R + E +L+ ++ RG
Sbjct: 409 YGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 518 LDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEF 577
+ TYN LI C ++ LF+EM+ G+ P +I+CNIL+ G C K ALE
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 578 LRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFK 637
+ + D V YN +I+G+CK + EA +LF L G+ PD TYN +IS
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 638 EGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
+ DA ++ HK NG P+++T+ L+R +K
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 224/478 (46%), Gaps = 33/478 (6%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L D G P ++N +++ L A L M+ KG+ V T+G ++ +C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ + SA +LL M + P+ V+Y +I L K S+A L EM+ G +V
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARAL---- 347
T+N +I G C R +A +L+ M+ R PD +T+ L+ + G++ EA L
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 348 LNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
L++ + V N++I G+ RFD+AK +F D M S PDV TFN +I C+ +R
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTIIDVYCRAKR 447
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
++L+ ++ +G N TY L+ GFC+ D +
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEV-----------------------DNLN 484
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
A L+Q+M+ GV +T+T N L++ F L EA +L + LD + YN +I
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLT 587
+C VD+ LF + G++P + N++I+G C + A M G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 588 PDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAF 645
PD TYN+LI G K G I +++ L ++++ G DA T +++ +G D +F
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 661
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 203/443 (45%), Gaps = 44/443 (9%)
Query: 236 VDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFND 295
+D A M + +V +I + NR A+ L +M + ++ +FN
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSAN 355
+I C +++ + ++ GF PD +T+ L+HGLC R+ EA AL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199
Query: 356 VVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELV 415
GY++ F EA A+F D M+ +G P V TFN LI+GLC + R A LV
Sbjct: 200 ---------GYMVETGFLEAVALF-DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 416 NAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQD 475
N M KG ++VTY +V+G CK G + A LN ++EE
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA-------------LNLLSKMEET------ 290
Query: 476 MLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGA 535
+ + V Y+ +I + G +A L ++ML +G + TYN +I C+ G
Sbjct: 291 ----HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 536 VDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNS 595
L +M+ + I P ++ N LI+ + K A + +M+HR + PD VTYNS
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 596 LINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANG 655
+I G CK +A ++FD + + PD VT+NT+I + + D+ +L + G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 656 FVPNDATWYILVRNLVKEINMES 678
V N T+ L+ + N+ +
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNA 485
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 535 AVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYN 594
++D + F+ M+R +++ CN +I R + + A+ R M R + +I ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 595 SLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVAN 654
LI C + +L+ F KL G PD VT+NTL+ E +A + V
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 655 GFVPNDATWYILVR 668
GF+ A + +V
Sbjct: 206 GFLEAVALFDQMVE 219
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 254/448 (56%), Gaps = 24/448 (5%)
Query: 194 VLVAGNCH----KVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKH 249
L+ G C + A + + G P V T+ V++ C E+++A S+L M+
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 250 GCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEA 309
P+ V Y T++ +L S ++ +A+ +L+ M+ C DV T+ +I C+ + + A
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 310 AKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVLLNTVING 365
KL+D M RG TPD +TY VL++G+C+ GR+DEA LN +PS+ NV+ N ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 366 YVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEP 425
+GR+ +A+ + D ML G P V TFNILI+ LC++ G A++++ M GC+P
Sbjct: 319 MCSTGRWMDAEKLLAD-MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 426 NIVTYTILVDGFCKEGQLEKANIIINEMLAKG-----LSLNT-------GDRIEEALGLY 473
N ++Y L+ GFCKE ++++A + M+++G ++ NT ++E+A+ +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 474 QDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNA 533
+ +G + +TYNT+I + G +A KL+++M + D ITY+ L+ L
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 534 GAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTY 593
G VD+ + F E R GI+P++++ N ++ GLC++R+ + A++FL MI+RG P+ +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 594 NSLINGLCKMGCIQEALNLFDKLQAEGI 621
LI GL G +EAL L ++L +G+
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 231/424 (54%), Gaps = 14/424 (3%)
Query: 262 IHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGF 321
+ + ++ + E LE M+ G D+ +I G C++ + +AAK+++ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 322 TPDDITYGVLMHGLCRTGRVDEARALLNKIP-SANVVLLNTVINGYVISGRFDEAKAIFY 380
PD ITY V++ G C+ G ++ A ++L+++ S +VV NT++ SG+ +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL- 227
Query: 381 DSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKE 440
D ML C PDV T+ ILI C+ G A++L++ M +GC P++VTY +LV+G CKE
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 441 GQLEKANIIINEMLAKGLSLN------------TGDRIEEALGLYQDMLLEGVTANTVTY 488
G+L++A +N+M + G N + R +A L DML +G + + VT+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 489 NTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMR 548
N LI+ R+G L A ++ M GC + ++YN L+ C +D+ + E M+
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 549 KGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQE 608
+G P ++ N ++ LC+ K A+E L + +G +P ++TYN++I+GL K G +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 609 ALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVR 668
A+ L D+++A+ + PD +TY++L+ +EG D+A H+ G PN T+ ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 669 NLVK 672
L K
Sbjct: 528 GLCK 531
Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 238/463 (51%), Gaps = 20/463 (4%)
Query: 227 MKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGC 286
++ + E++ L +M HG VP+ + TLI + + +A +LE + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 287 TSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARA 346
DV T+N +I G CK I+ A ++DRM V +PD +TY ++ LC +G++ +A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225
Query: 347 LLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGL 402
+L+++ +V+ +I A + D M GC PDV T+N+L++G+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL-DEMRDRGCTPDVVTYNVLVNGI 284
Query: 403 CKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS--- 459
CK+ R A++ +N M GC+PN++T+ I++ C G+ A ++ +ML KG S
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 460 ---------LNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVND 510
L + A+ + + M G N+++YN L+H F + + A + +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 511 MLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRK 570
M+ RGC D +TYN ++ ALC G V+ + + ++ KG P I+ N +I+GL + K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 571 ANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNT 630
A++ L +M + L PD +TY+SL+ GL + G + EA+ F + + GI P+AVT+N+
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 631 LISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
++ K D A L + G PN+ ++ IL+ L E
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 213/419 (50%), Gaps = 31/419 (7%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
+LD SV P +YN +L L K A + ML + P V T+ ++++A C
Sbjct: 194 VLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ V A LL +M GC P+ V Y L++ + K R+ EA+ L +M GC +V
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T N ++ +C R +A KL+ ML +GF+P +T+ +L++ LCR G + A +L K+
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 352 P----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
P N + N +++G+ + D A + + M+S GC PD+ T+N ++ LCK +
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIE-YLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
A+E++N ++ KGC P ++TY ++DG K G+ KA +++EM AK L
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK-------- 481
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
+T+TY++L+ R G + EA K ++ G + +T+N ++
Sbjct: 482 ---------------PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
LC + D+ + M+ +G KP+ S ILI GL A ALE L ++ ++GL
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 191/351 (54%), Gaps = 14/351 (3%)
Query: 116 VYYVLIDKL----GANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRL 171
Y +LI+ G K++D +M++ G + +++ + G +A +
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLD----EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L DM S GCQP ++N++L + + A L DML KG SP+V TF +++ LC
Sbjct: 297 LNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ A +L M +HGC PNS+ Y L+H K ++ A+ LE M+ GC D+
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T+N ++ LCK ++ +A ++++++ +G +P ITY ++ GL + G+ +A LL+++
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 352 PSANV----VLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+ ++ + ++++ G G+ DEA F++ +G P+ TFN ++ GLCK R+
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL 458
A++ + M +GC+PN +YTIL++G EG ++A ++NE+ KGL
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 188/389 (48%), Gaps = 59/389 (15%)
Query: 289 DVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALL 348
DV++ N+ + + + + E K ++ M+ G PD I L+ G CR G+ +A +L
Sbjct: 102 DVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 349 NKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRF 408
+ + G +PDV T+N++I G CK
Sbjct: 161 EILEGS--------------------------------GAVPDVITYNVMISGYCKAGEI 188
Query: 409 GSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEE 468
+AL +++ M+V P++VTY ++ C G+L++A +++ ML +
Sbjct: 189 NNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC---------- 235
Query: 469 ALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIK 528
Y D+ +TY LI A R + A KL+++M RGC D +TYN L+
Sbjct: 236 ----YPDV---------ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 529 ALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTP 588
+C G +D+ + +M G +P+ I+ NI++ +C T + A + L DM+ +G +P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 589 DIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLIL 648
+VT+N LIN LC+ G + A+++ +K+ G P++++YN L+ KE D A L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 649 HKGVANGFVPNDATWYILVRNLVKEINME 677
+ V+ G P+ T+ ++ L K+ +E
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 518 LDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEF 577
L+++ N ++ + G +++G E M+ G P I C LI G CR K A +
Sbjct: 100 LEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 578 LRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFK 637
L + G PD++TYN +I+G CK G I AL++ D++ + PD VTYNT++
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCD 216
Query: 638 EGLFDDAFLILHKGVANGFVPNDATWYILV 667
G A +L + + P+ T+ IL+
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 281/546 (51%), Gaps = 20/546 (3%)
Query: 149 ESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLF 208
+S+F L+++ Y + +A ++S G + + N ++ LV ++A ++
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRS-KGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 209 YDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKS 268
++ G+ VYT +++ ALC +++ + L + + G P+ V Y TLI A S
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 269 NRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITY 328
+ EA L+ M G + V T+N VI+GLCK + A ++ ML G +PD TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 329 GVLMHGLCRTGRVDEARALLNKIPSANVV----LLNTVINGYVISGRFDEAKAIFYDSML 384
L+ C+ G V E + + + S +VV +++++ + SG D+A ++++S+
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA-LMYFNSVK 402
Query: 385 SVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLE 444
G IPD + ILI G C++ A+ L N M +GC ++VTY ++ G CK L
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 445 KANIIINEMLAKGLSLNTGD------------RIEEALGLYQDMLLEGVTANTVTYNTLI 492
+A+ + NEM + L ++ ++ A+ L+Q M + + + VTYNTL+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 493 HAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIK 552
F + G + A ++ DM+ + I+Y+ L+ ALC+ G + + +++EM+ K IK
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 553 PSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNL 612
P+ + CN +I G CR+ A+ FL MI G PD ++YN+LI G + + +A L
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 613 FDKLQAE--GIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNL 670
K++ E G+ PD TYN+++ ++ +A ++L K + G P+ +T+ ++
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 671 VKEINM 676
V + N+
Sbjct: 703 VSQDNL 708
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 207/450 (46%), Gaps = 36/450 (8%)
Query: 255 SVVYQTLIHALSKSNRVSEALMLLEEMI-----------------LMGCTSDVQTFNDVI 297
S+ +IH L +S R+S+A L MI C S+ F+ +I
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172
Query: 298 HGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA--- 354
+ ++ EA + + +GFT L+ L R G V+ A + +I +
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 355 -NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALE 413
NV LN ++N G+ ++ F + G PD+ T+N LI + A E
Sbjct: 233 INVYTLNIMVNALCKDGKMEKV-GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT----------- 462
L+NAM KG P + TY +++G CK G+ E+A + EML GLS ++
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 463 --GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
GD +E ++ DM V + V +++++ F R G+L +A N + G D
Sbjct: 352 KKGDVVETE-KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRD 580
+ Y LI+ C G + + L EM+++G ++ N +++GLC+ + A + +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 581 MIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGL 640
M R L PD T LI+G CK+G +Q A+ LF K++ + I D VTYNTL+ K G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 641 FDDAFLILHKGVANGFVPNDATWYILVRNL 670
D A I V+ +P ++ ILV L
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNAL 560
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 166/371 (44%), Gaps = 51/371 (13%)
Query: 134 DSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLD 193
+ V M+ ++ F +M + R G +A +K G P NV+
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA-GLIPD----NVIYT 414
Query: 194 VLVAGNCHK----VAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKH 249
+L+ G C K VA NL +ML +G + V T+ ++ LC + A L +MT+
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 250 GCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEA 309
P+S LI K + A+ L ++M DV T+N ++ G KV I A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 310 AKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSAN----VVLLNTVING 365
++ M+ + P I+Y +L++ LC G + EA + +++ S N V++ N++I G
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 366 YVISGRFDEAKAIFYDSMLSVG----CI-------------------------------- 389
Y SG + ++ F + M+S G CI
Sbjct: 595 YCRSGNASDGES-FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 390 -PDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANI 448
PDVFT+N ++HG C+Q + A ++ M +G P+ TYT +++GF + L +A
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 449 IINEMLAKGLS 459
I +EML +G S
Sbjct: 714 IHDEMLQRGFS 724
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%)
Query: 483 ANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGL 542
+N ++ LI +++ L EAH+ + +G + N LI +L G V+ G+
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 543 FEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCK 602
++E+ R G+ + + NI++N LC+ K FL + +G+ PDIVTYN+LI+
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 603 MGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDAT 662
G ++EA L + + +G P TYNT+I+ K G ++ A + + + +G P+ T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 663 WYILVRNLVKE 673
+ L+ K+
Sbjct: 343 YRSLLMEACKK 353
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 139 QMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAG 198
+MKE+ I + ++ +G+ G A + DM S PT SY+++++ L +
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISYSILVNALCSK 563
Query: 199 NCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVY 258
A ++ +M+SK I PTV ++K C S L M G VP+ + Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 259 QTLIHALSKSNRVSEALMLLEEMI--LMGCTSDVQTFNDVIHGLCKVNRIHEAA------ 310
TLI+ + +S+A L+++M G DV T+N ++HG C+ N++ EA
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 311 -----------------------------KLVDRMLVRGFTPDD 325
++ D ML RGF+PDD
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 254/480 (52%), Gaps = 31/480 (6%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ + +L+V+ V NL + G+S +YT ++M C ++ A S
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V + +LI+ NR+ EA+ ++ +M+ MG DV + +I LCK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVL 358
++ A L D+M G PD + Y L++GLC +GR +A +LL + +V+
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
N +I+ +V G+F +A+ + Y+ M+ + P++FT+ LI+G C + A ++ M
Sbjct: 250 FNALIDAFVKEGKFLDAEEL-YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
KGC P++V YT L++GFCK +++ A I EM KGL
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL-------------------- 348
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
T NT+TY TLI F + G + A ++ + M+ RG P + TYN L+ LC G V K
Sbjct: 349 ---TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 539 GLGLFEEMMRK---GIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNS 595
L +FE+M ++ G+ P+ + N+L++GLC K AL DM R + I+TY
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 596 LINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANG 655
+I G+CK G ++ A+NLF L ++G+ P+ VTY T+IS F+EGL +A ++ K +G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 229/457 (50%), Gaps = 31/457 (6%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L D + G + N++++ + +A + M+ G P + TF ++ C
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ N ++ A S++ M + G P+ V+Y T+I +L K+ V+ AL L ++M G DV
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
+ +++GLC R +A L+ M R PD IT+ L+ + G+ +A L N++
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 352 ----PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+ N+ ++ING+ + G DEA+ +FY M + GC PDV + LI+G CK ++
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY-LMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
A+++ M+ KG N +TYT L+ GF GQ+ K N+
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGF---GQVGKPNV------------------- 370
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFR---GCPLDEITYN 524
A ++ M+ GV N TYN L+H G + +A + DM R G + TYN
Sbjct: 371 -AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 525 GLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHR 584
L+ LC G ++K L +FE+M ++ + I+ I+I G+C+ K A+ + +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 585 GLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGI 621
G+ P++VTY ++I+GL + G EA LF K++ +G+
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 200/439 (45%), Gaps = 58/439 (13%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+ + A L M + +P+ + + L++ ++K + + L + + +MG + D+ T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA 354
+++ C+ ++ + A+ + +M+ GF PD +T+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTF-------------------------- 145
Query: 355 NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALEL 414
++ING+ + R +EA ++ + M+ +G PDV + +I LCK AL L
Sbjct: 146 -----TSLINGFCLGNRMEEAMSMV-NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 415 VNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQ 474
+ M G P++V YT LV+G C G R +A L +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSG-----------------------RWRDADSLLR 236
Query: 475 DMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAG 534
M + + +T+N LI AF++ G +A +L N+M+ + TY LI C G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 535 AVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYN 594
VD+ +F M KG P ++ LING C+ +K + A++ +M +GLT + +TY
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 595 SLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLI---LHKG 651
+LI G ++G A +F + + G+ P+ TYN L+ G A +I + K
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 652 VANGFVPNDATWYILVRNL 670
+G PN T+ +L+ L
Sbjct: 417 EMDGVAPNIWTYNVLLHGL 435
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 157/337 (46%), Gaps = 24/337 (7%)
Query: 332 MHGLCRTGRVDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPD 391
+H L +D ++ P +++ ++N +FD + D + +G D
Sbjct: 48 LHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL-CDHLQIMGVSHD 106
Query: 392 VFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIIN 451
++T N+L++ C+ + A + M G EP+IVT+T L++GFC
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC------------- 153
Query: 452 EMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDM 511
G+R+EEA+ + M+ G+ + V Y T+I + + G ++ A L + M
Sbjct: 154 ----------LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 512 LFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKA 571
G D + Y L+ LCN+G L M ++ IKP I+ N LI+ + K
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 572 NTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTL 631
A E +MI + P+I TY SLING C GC+ EA +F ++ +G +PD V Y +L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 632 ISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVR 668
I+ K DDA I ++ G N T+ L++
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 171/351 (48%), Gaps = 9/351 (2%)
Query: 116 VYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDM 175
+Y +ID L N S+ QM+ GI ++ ++ G A LL M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 176 KSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNE 235
+ +P ++N ++D V A L+ +M+ I+P ++T+ ++ CM
Sbjct: 239 -TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 236 VDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFND 295
VD A + M GC P+ V Y +LI+ K +V +A+ + EM G T + T+
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP--- 352
+I G +V + + A ++ M+ RG P+ TY VL+H LC G+V +A + +
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 353 ----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRF 408
+ N+ N +++G +G+ ++A +F D M + T+ I+I G+CK +
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED-MRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 409 GSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS 459
+A+ L ++ KG +PN+VTYT ++ G +EG +A+++ +M G+S
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 397 ILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAK 456
IL +GL +F AL+L M P+I+ +T L++ K ++K +++IN
Sbjct: 43 ILRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAK---MKKFDVVIN----- 93
Query: 457 GLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGC 516
L + + GV+ + T N L++ F + + A + M+ G
Sbjct: 94 ---------------LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 517 PLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALE 576
D +T+ LI C +++ + + +M+ GIKP + +I+ LC+ N AL
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 577 FLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHF 636
M + G+ PD+V Y SL+NGLC G ++A +L + I PD +T+N LI
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 637 KEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
KEG F DA + ++ + PN T+ L+ E
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 242/449 (53%), Gaps = 28/449 (6%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ +N +L +V + V +L M GI +YTF +V+ C +V A S+
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ + NRVS+A+ L+++M+ +G D+ +N +I LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLN----KIPSANVVL 358
R+++A + +G P+ +TY L++GLC + R +A LL+ K + NV+
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
+ +++ +V +G+ EAK +F + M+ + PD+ T++ LI+GLC R A ++ + M
Sbjct: 263 YSALLDAFVKNGKVLEAKELF-EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
KGC ++V+Y L++GFCK R+E+ + L+++M
Sbjct: 322 VSKGCLADVVSYNTLINGFCK-----------------------AKRVEDGMKLFREMSQ 358
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
G+ +NTVTYNTLI F + G + +A + + M F G D TYN L+ LC+ G ++K
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
L +FE+M ++ + ++ +I G+C+T K A + +GL PDIVTY ++++
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPDAVT 627
GLC G + E L+ K++ EG+ + T
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 237/446 (53%), Gaps = 21/446 (4%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+++ A L DM K P+ V + L+ A+ K + + L ++M ++G +D+ TFN
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS- 353
VI+ C ++ A ++ +ML G+ PD +T G L++G CR RV +A +L++K+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 354 ---ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
++V N +I+ + R ++A F+ + G P+V T+ L++GLC R+
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFD-FFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEM--------------LAK 456
A L++ M K PN++TY+ L+D F K G++ +A + EM L
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 457 GLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGC 516
GL L+ DRI+EA ++ M+ +G A+ V+YNTLI+ F + + + KL +M RG
Sbjct: 304 GLCLH--DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 517 PLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALE 576
+ +TYN LI+ AG VDK F +M GI P + NIL+ GLC + AL
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 577 FLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHF 636
DM R + DIVTY ++I G+CK G ++EA +LF L +G+ PD VTY T++S
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 637 KEGLFDDAFLILHKGVANGFVPNDAT 662
+GL + + K G + ND T
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 196/393 (49%), Gaps = 28/393 (7%)
Query: 178 VYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVD 237
V G + ++N+V++ +A ++ ML G P T G ++ C N V
Sbjct: 113 VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 238 SACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVI 297
A SL+ M + G P+ V Y +I +L K+ RV++A +E+ G +V T+ ++
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 298 HGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----S 353
+GLC +R +AA+L+ M+ + TP+ ITY L+ + G+V EA+ L ++
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 354 ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALE 413
++V +++ING + R DEA +F D M+S GC+ DV ++N LI+G CK +R ++
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLY 473
L M+ +G N VTY L+ GF + G ++KA +
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ-----------------------EFF 388
Query: 474 QDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNA 533
M G++ + TYN L+ G L +A + DM R LD +TY +I+ +C
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 534 GAVDKGLGLFEEMMRKGIKPSSISCNILINGLC 566
G V++ LF + KG+KP ++ +++GLC
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 186/389 (47%), Gaps = 40/389 (10%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D G +P +YN ++D L A + F ++ KGI P V T+ ++ LC
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ A LL DM K PN + Y L+ A K+ +V EA L EEM+ M D+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T++ +I+GLC +RI EA ++ D M+ +G D ++Y L++G C+ RV++ L ++
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 352 PS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+N V NT+I G+ +G D+A+ F+ M G PD++T+NIL+ GLC
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQE-FFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
AL + M + + +IVTYT ++ G CK G ++E
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG-----------------------KVE 452
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
EA L+ + L+G+ + VTY T++ +G LHE L M GL+
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM----------KQEGLM 502
Query: 528 KALCNAGAVDKGLG--LFEEMMRKGIKPS 554
K C D L L ++M+ G PS
Sbjct: 503 KNDCTLSDGDITLSAELIKKMLSCGYAPS 531
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 150/337 (44%), Gaps = 59/337 (17%)
Query: 371 RFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTY 430
+ ++A +F D M+ P + FN L+ + K +++ + L M V G ++ T+
Sbjct: 65 KLNDAIDLFSD-MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 431 TILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNT 490
I+++ FC Q + AL + ML G + VT +
Sbjct: 124 NIVINCFCCCFQ-----------------------VSLALSILGKMLKLGYEPDRVTIGS 160
Query: 491 LIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKG 550
L++ F RR + +A LV+ M+ G D + YN +I +LC V+ F+E+ RKG
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 551 IKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLT----------------------- 587
I+P+ ++ L+NGLC + + + A L DMI + +T
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 588 ------------PDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWH 635
PDIVTY+SLINGLC I EA +FD + ++G D V+YNTLI+
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 636 FKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
K +D + + G V N T+ L++ +
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 554 SSISCNILINGLCRTR----KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEA 609
SS+S L L +TR K N A++ DM+ P IV +N L++ + K+
Sbjct: 45 SSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV 104
Query: 610 LNLFDKLQAEGIYPDAVTYNTLISWH---FKEGLFDDAFLILHKGVANGFVPNDATWYIL 666
++L K++ GI D T+N +I+ F+ L A IL K + G+ P+ T L
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSL---ALSILGKMLKLGYEPDRVTIGSL 161
Query: 667 VRNLVKE 673
V +
Sbjct: 162 VNGFCRR 168
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 252 bits (644), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 168/553 (30%), Positives = 281/553 (50%), Gaps = 30/553 (5%)
Query: 141 KEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNC 200
K + C + +IM Y G G +A LL + + G P+ +YN +L L
Sbjct: 301 KNRRVPCTYAYNTMIMGY-GSAGKFDEAYSLL-ERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 201 HKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQT 260
A +F +M K +P + T+ +++ LC ++D+A L M K G PN
Sbjct: 359 VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 261 LIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRG 320
++ L KS ++ EA + EEM CT D TF +I GL KV R+ +A K+ ++ML
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 321 FTPDDITYGVLMHGLCRTGRVDEA----RALLNKIPSANVVLLNTVINGYVISGRFDEAK 376
+ I Y L+ GR ++ + ++N+ S ++ LLNT ++ +G ++ +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 377 AIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDG 436
A+F + + + +PD +++ILIHGL K EL +M +GC + Y I++DG
Sbjct: 538 AMF-EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 437 FCKEGQLEKANIIINEMLAKGLS------------LNTGDRIEEALGLYQDMLLEGVTAN 484
FCK G++ KA ++ EM KG L DR++EA L+++ + + N
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 485 TVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFE 544
V Y++LI F + G + EA+ ++ +++ +G + T+N L+ AL A +++ L F+
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 545 EMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMG 604
M P+ ++ ILINGLC+ RK N A F ++M +G+ P ++Y ++I+GL K G
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 605 CIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFD-----DAFLILHKGVANGFVPN 659
I EA LFD+ +A G PD+ YN +I EGL + DAF + + G +
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMI-----EGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 660 DATWYILVRNLVK 672
+ T +L+ L K
Sbjct: 832 NKTCVVLLDTLHK 844
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 186/670 (27%), Positives = 296/670 (44%), Gaps = 70/670 (10%)
Query: 66 PFDLNELRKSLHKITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLG 125
P N L K P + +LR DV+ ++E F W + H + Y L+ +
Sbjct: 50 PSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMA 109
Query: 126 ANKEFKVIDSVLLQMKEEGI-----ICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYG 180
+ F +D +L +M G C E + + R G ++ M +
Sbjct: 110 RCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYD------VVQMMRKFK 163
Query: 181 CQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSAC 240
+P F +Y ++ A N + LF M G PTV+ F +++ VDSA
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 241 SLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGL 300
SLL +M + V+Y I + K +V A E+ G D T+ +I L
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 301 CKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNK------IPSA 354
CK NR+ EA ++ + + P Y ++ G G+ DEA +LL + IPS
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS- 342
Query: 355 NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALEL 414
V+ N ++ G+ DEA +F + + P++ T+NILI LC+ + +A EL
Sbjct: 343 -VIAYNCILTCLRKMGKVDEALKVFEE--MKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 415 VNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS------------LNT 462
++M G PN+ T I+VD CK +L++A + EM K + L
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 463 GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEIT 522
R+++A +Y+ ML N++ Y +LI F G + HK+ DM+ + C D
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 523 YNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGL----------------- 565
N + + AG +KG +FEE+ + P + S +ILI+GL
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 566 ------------------CRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQ 607
C+ K N A + L +M +G P +VTY S+I+GL K+ +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 608 EALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILV 667
EA LF++ +++ I + V Y++LI K G D+A+LIL + + G PN TW L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 668 RNLVK--EIN 675
LVK EIN
Sbjct: 700 DALVKAEEIN 709
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 261/554 (47%), Gaps = 24/554 (4%)
Query: 84 LCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEE 143
LCK RL D ++E+F T+ Y +I G+ +F S+L + + +
Sbjct: 283 LCKANRL----DEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 144 GIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKV 203
G I + I+ + G +A ++ +MK P +YN+++D+L
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDT 395
Query: 204 APNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIH 263
A L M G+ P V T +++ LC ++D AC++ +M C P+ + + +LI
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 264 ALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTP 323
L K RV +A + E+M+ C ++ + +I R + K+ M+ + +P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 324 DDITYGVLMHGLCRTGRVDEARALLNKIPSANVV----LLNTVINGYVISGRFDEAKAIF 379
D M + + G ++ RA+ +I + V + +I+G + +G +E +F
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 380 YDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCK 439
Y SM GC+ D +NI+I G CK + A +L+ M KG EP +VTY ++DG K
Sbjct: 576 Y-SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 440 EGQLEKANIIINEMLAKGLSLNTG------------DRIEEALGLYQDMLLEGVTANTVT 487
+L++A ++ E +K + LN RI+EA + ++++ +G+T N T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 488 YNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMM 547
+N+L+ A ++ ++EA M C +++TY LI LC +K ++EM
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 548 RKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQ 607
++G+KPS+IS +I+GL + A G PD YN++I GL
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 608 EALNLFDKLQAEGI 621
+A +LF++ + G+
Sbjct: 815 DAFSLFEETRRRGL 828
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 160/389 (41%), Gaps = 35/389 (8%)
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI---- 351
V+ L VNR E + +R P+ +Y L+ + R D +L ++
Sbjct: 71 VLRRLKDVNRAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMSVAG 128
Query: 352 --PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFG 409
PS N + ++ G V + + E + M P + LI
Sbjct: 129 FGPSVNTCI--EMVLGCVKANKLREGYDVV-QMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185
Query: 410 SALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEA 469
L L M G EP + +T L+ GF KEG R++ A
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG-----------------------RVDSA 222
Query: 470 LGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKA 529
L L +M + A+ V YN I +F + G + A K +++ G DE+TY +I
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 530 LCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPD 589
LC A +D+ + +FE + + P + + N +I G K + A L +G P
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 590 IVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILH 649
++ YN ++ L KMG + EAL +F++++ + P+ TYN LI + G D AF +
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 650 KGVANGFVPNDATWYILVRNLVKEINMES 678
G PN T I+V L K ++
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 1/237 (0%)
Query: 108 EGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQ 167
+G+ T Y +ID L + + K + I ++ ++ +G+ G +
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 168 ATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVM 227
A L+L+ G P ++N +LD LV A F M +P T+G+++
Sbjct: 676 AY-LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 228 KALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCT 287
LC V + + A ++M K G P+++ Y T+I L+K+ ++EA L + G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 288 SDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA 344
D +N +I GL NR +A L + RG + T VL+ L + +++A
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 240/445 (53%), Gaps = 18/445 (4%)
Query: 242 LLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLC 301
LL M + G P+ ++ LI + +A+ ++E + G DV +N +I+G C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 302 KVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSAN----VV 357
K+NRI +A +++DRM + F+PD +TY +++ LC G++D A +LN++ S N V+
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 358 LLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNA 417
+I ++ G DEA + D MLS G PD+FT+N +I G+CK+ A E+V
Sbjct: 230 TYTILIEATMLEGGVDEALKLM-DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 418 MAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------GDR 465
+ +KGCEP++++Y IL+ +G+ E+ ++ +M ++ N +
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 466 IEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNG 525
IEEA+ L + M +G+T + +Y+ LI AF R G L A + + M+ GC D + YN
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 526 LIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRG 585
++ LC G D+ L +F ++ G P+S S N + + L + AL + +M+ G
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 586 LTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAF 645
+ PD +TYNS+I+ LC+ G + EA L +++ +P VTYN ++ K +DA
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 646 LILHKGVANGFVPNDATWYILVRNL 670
+L V NG PN+ T+ +L+ +
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGI 553
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 208/393 (52%), Gaps = 16/393 (4%)
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA---RALLNKIP 352
+ H C+ E+ L++ M+ +G+ PD I L+ G + +A +L K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 353 SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSAL 412
+V N +ING+ R D+A + D M S PD T+NI+I LC + + AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVL-DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 413 ELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL-----SLNTGDR-- 465
+++N + C+P ++TYTIL++ EG +++A +++EML++GL + NT R
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 466 -----IEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
++ A + +++ L+G + ++YN L+ A L +G E KL+ M C +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRD 580
+TY+ LI LC G +++ + L + M KG+ P + S + LI CR + + A+EFL
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 581 MIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGL 640
MI G PDIV YN+++ LCK G +AL +F KL G P++ +YNT+ S + G
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 641 FDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
A ++ + ++NG P++ T+ ++ L +E
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 228/486 (46%), Gaps = 35/486 (7%)
Query: 154 LIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLS 213
LI ++ +P +A R++ ++ +G QP +YN +++ N A + M S
Sbjct: 130 LIKGFFTLRNIP-KAVRVM-EILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRS 186
Query: 214 KGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSE 273
K SP T+ +++ +LC ++D A +L + C P + Y LI A V E
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 274 ALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMH 333
AL L++EM+ G D+ T+N +I G+CK + A ++V + ++G PD I+Y +L+
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306
Query: 334 GLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCI 389
L G+ +E L+ K+ S NVV + +I G+ +EA + M G
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL-KLMKEKGLT 365
Query: 390 PDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANII 449
PD ++++ LI C++ R A+E + M GC P+IV Y ++ CK G
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG-------- 417
Query: 450 INEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVN 509
+ ++AL ++ + G + N+ +YNT+ A G A ++
Sbjct: 418 ---------------KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 510 DMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTR 569
+M+ G DEITYN +I LC G VD+ L +M PS ++ NI++ G C+
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 570 KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYN 629
+ A+ L M+ G P+ TY LI G+ G EA+ L + L + DA++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL----VRIDAISEY 578
Query: 630 TLISWH 635
+ H
Sbjct: 579 SFKRLH 584
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 136/280 (48%), Gaps = 24/280 (8%)
Query: 398 LIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG 457
+ H C+ + +L L+ M KG P+++ T L+ GF + KA + + E+L
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEIL--- 150
Query: 458 LSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCP 517
E G + YN LI+ F + + +A ++++ M +
Sbjct: 151 ----------EKFG----------QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS 190
Query: 518 LDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEF 577
D +TYN +I +LC+ G +D L + +++ +P+ I+ ILI + AL+
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 578 LRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFK 637
+ +M+ RGL PD+ TYN++I G+CK G + A + L+ +G PD ++YN L+
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 638 EGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINME 677
+G +++ ++ K + PN T+ IL+ L ++ +E
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 37/196 (18%)
Query: 94 VDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFI 153
D ++EIF G + G Y + L ++ + ++L+M GI E +
Sbjct: 419 ADQALEIFGKLG-EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 154 LIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLS 213
++ R G+ +A LL+DM+S C+
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRS---CE------------------------------- 503
Query: 214 KGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSE 273
P+V T+ +V+ C + ++ A ++L M +GC PN Y LI + + +E
Sbjct: 504 --FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 274 ALMLLEEMILMGCTSD 289
A+ L +++ + S+
Sbjct: 562 AMELANDLVRIDAISE 577
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 249/461 (54%), Gaps = 28/461 (6%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ ++ +L + N + + M GIS +YT+ +++ C + + A +L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ NR+S+A+ L+++M+ MG D TF +IHGL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVL 358
N+ EA L+DRM+ RG PD +TYG +++GLC+ G D A LLNK+ +A NVV+
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
+TVI+ D+A +F + M + G P+V T++ LI LC R+ A L++ M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTE-MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
+ PN+VT++ L+D F K+G+L KA LY++M+
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAE-----------------------KLYEEMIK 351
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
+ N TY++LI+ F L EA +++ M+ + C + +TYN LI C A VDK
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
G+ LF EM ++G+ ++++ LI+G + R + A + M+ G+ P+I+TYN L++
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEG 639
GLCK G + +A+ +F+ LQ + PD TYN +I K G
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 239/470 (50%), Gaps = 17/470 (3%)
Query: 219 TVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLL 278
T Y + V++ E+D A L M + P+ + + L+ A++K N+ +
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 279 EEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRT 338
E+M ++G + ++ T+N +I+ C+ +R+ A L+ +M+ G+ PD +T L++G C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 339 GRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFT 394
R+ +A AL++++ + V T+I+G + + EA A+ D M+ GC PD+ T
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI-DRMVQRGCQPDLVT 220
Query: 395 FNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEML 454
+ +++GLCK+ AL L+N M E N+V Y+ ++D CK + A + EM
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 455 AKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLH 502
KG+ N R +A L DM+ + N VT++ LI AF+++G L
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 503 EAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILI 562
+A KL +M+ R + TY+ LI C + + + E M+RK P+ ++ N LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 563 NGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIY 622
NG C+ ++ + +E R+M RGL + VTY +LI+G + A +F ++ + G++
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 623 PDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
P+ +TYN L+ K G A ++ + P+ T+ I++ + K
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 207/433 (47%), Gaps = 65/433 (15%)
Query: 178 VYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVD 237
+ G +YN++++ + +A L M+ G P + T ++ C N +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 238 SACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVI 297
A +L+ M + G P++V + TLIH L N+ SEA+ L++ M+ GC D+ T+ V+
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 298 HGLCK----------VNRIHEAAK--------------------------LVDRMLVRGF 321
+GLCK +N++ EAAK L M +G
Sbjct: 226 NGLCKRGDTDLALNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 322 TPDDITYGVLMHGLCRTGRVDEARALLNKI----PSANVVLLNTVINGYVISGRFDEAKA 377
P+ ITY L+ LC GR +A LL+ + + N+V + +I+ +V G+ +A+
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 378 IFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGF 437
+ Y+ M+ P++FT++ LI+G C R G A +++ M K C PN+VTY L++GF
Sbjct: 345 L-YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 438 CKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLR 497
CK R+++ + L+++M G+ NTVTY TLIH F +
Sbjct: 404 CK-----------------------AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 498 RGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSIS 557
A + M+ G + +TYN L+ LC G + K + +FE + R ++P +
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500
Query: 558 CNILINGLCRTRK 570
NI+I G+C+ K
Sbjct: 501 YNIMIEGMCKAGK 513
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 142/265 (53%), Gaps = 5/265 (1%)
Query: 188 YNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMT 247
Y+ V+D L A NLF +M +KG+ P V T+ ++ LC A LL DM
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 248 KHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIH 307
+ PN V + LI A K ++ +A L EEMI ++ T++ +I+G C ++R+
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 308 EAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVI 363
EA ++++ M+ + P+ +TY L++G C+ RVD+ L ++ N V T+I
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 364 NGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGC 423
+G+ + D A+ +F M+SVG P++ T+NIL+ GLCK + A+ + +
Sbjct: 436 HGFFQARDCDNAQMVF-KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 424 EPNIVTYTILVDGFCKEGQLEKANI 448
EP+I TY I+++G CK G+ + I
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGI 519
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 173/372 (46%), Gaps = 28/372 (7%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D G +P ++ ++ L N A L M+ +G P + T+G V+ LC
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ D A +LL M N V+Y T+I +L K +AL L EM G +V
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARAL---- 347
T++ +I LC R +A++L+ M+ R P+ +T+ L+ + G++ +A L
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 348 LNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+ + N+ +++ING+ + R EAK + + M+ C+P+V T+N LI+G CK +R
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQML-ELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIE 467
+EL M+ +G N VTYT L+ GF + + A ++ +M++
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS------------ 456
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
GV N +TYN L+ + G L +A + + D TYN +I
Sbjct: 457 -----------VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 528 KALCNAGAVDKG 539
+ +C AG G
Sbjct: 506 EGMCKAGKWKMG 517
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 390 PDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANII 449
P + F+ L+ + K +F + M + G N+ TY IL++ FC+ +L A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 450 INEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVN 509
+ +M+ G + VT N+L++ F + +A LV+
Sbjct: 136 LGKMMKLGYE-----------------------PDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 510 DMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTR 569
M+ G D +T+ LI L + + L + M+++G +P ++ ++NGLC+
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 570 KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYN 629
+ AL L M + ++V Y+++I+ LCK +ALNLF +++ +G+ P+ +TY+
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 630 TLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
+LIS G + DA +L + PN T+ L+ VK+
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/580 (29%), Positives = 281/580 (48%), Gaps = 20/580 (3%)
Query: 120 LIDKLGANKEFK-VIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSV 178
L+ L A+K +D VL +M E G I + +++K +A LL M
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 179 YG--CQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEV 236
G P SY V++ A + +++ML +GI P V T+ ++ ALC +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 237 DSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDV 296
D A +L M K+G +P+ + Y +++H S + EA+ L++M G DV T++ +
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 297 IHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANV 356
+ LCK R EA K+ D M RG P+ TYG L+ G G + E LL+ + +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 357 ----VLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSAL 412
+ + +I Y G+ D+A +F M G P+ T+ +I LCK R A+
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVF-SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 413 ELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT---------- 462
M +G P + Y L+ G C + E+A +I EML +G+ LNT
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 463 --GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
R+ E+ L++ M+ GV N +TYNTLI+ + G + EA KL++ M+ G +
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRD 580
+TY+ LI C ++ L LF+EM G+ P I+ NI++ GL +TR+ A E
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 581 MIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGL 640
+ G ++ TYN +++GLCK +AL +F L + +A T+N +I K G
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 641 FDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMESWN 680
D+A + +NG VPN T+ ++ N++ + +E +
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 251/482 (52%), Gaps = 21/482 (4%)
Query: 216 ISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEAL 275
++P + T+G+++ C +D + L ++ K G +++ + L+ L R S+A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 276 -MLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVR---GFTPDDITYGVL 331
++L M +GC +V ++N ++ GLC NR EA +L+ M G PD ++Y +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 332 MHGLCRTGRVDEARA----LLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVG 387
++G + G D+A + +L++ +VV N++I + D+A + ++M+ G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL-NTMVKNG 261
Query: 388 CIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKAN 447
+PD T+N ++HG C + A+ + M G EP++VTY++L+D CK G+ +A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 448 IIINEMLAKGL------------SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAF 495
I + M +GL T + E GL M+ G+ + ++ LI A+
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 496 LRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSS 555
++G + +A + + M +G + +TY +I LC +G V+ + FE+M+ +G+ P +
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 556 ISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDK 615
I N LI+GLC K A E + +M+ RG+ + + +NS+I+ CK G + E+ LF+
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 616 LQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEIN 675
+ G+ P+ +TYNTLI+ + G D+A +L V+ G PN T+ L+ K
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 676 ME 677
ME
Sbjct: 562 ME 563
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 217/478 (45%), Gaps = 34/478 (7%)
Query: 137 LLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLV 196
L +M+ +G+ + L+M Y + G +A R + D + G +P +Y +L
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA-RKIFDSMTKRGLKPEITTYGTLLQGYA 347
Query: 197 AGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSV 256
L M+ GI P Y F +++ A +VD A + M + G PN+V
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 257 VYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRM 316
Y +I L KS RV +A++ E+MI G + +N +IHGLC N+ A +L+ M
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 317 LVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRF 372
L RG + I + ++ C+ GRV E+ L + NV+ NT+INGY ++G+
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 373 DEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTI 432
DEA + M+SVG P+ T++ LI+G CK R AL L M G P+I+TY I
Sbjct: 528 DEAMKLL-SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 433 LVDGFCKEGQLEKANIIINEMLAKG--LSLNTGDRI----------EEALGLYQDMLLEG 480
++ G + + A + + G + L+T + I ++AL ++Q++ L
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 481 VTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGL 540
+ T+N +I A L+ G EA L G + TY + + + G +++
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Query: 541 GLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
LF M G S N ++ R+++ RG TY S+I+
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIV----------------RELLQRGEITRAGTYLSMID 748
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 200/447 (44%), Gaps = 32/447 (7%)
Query: 116 VYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDM 175
Y +L+D L N + M + G+ + + +++ Y G + LLD+
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE-MHGLLDL 361
Query: 176 KSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNE 235
G P +++++ A +F M +G++P T+G V+ LC
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 236 VDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFND 295
V+ A M G P ++VY +LIH L N+ A L+ EM+ G + FN
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA- 354
+I CK R+ E+ KL + M+ G P+ ITY L++G C G++DEA LL+ + S
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 355 ---NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSA 411
N V +T+INGY R ++A +F + M S G PD+ T+NI++ GL + RR +A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKE-MESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 412 LELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA-------------------NIIINE 452
EL + G + + TY I++ G CK + A NI+I+
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 453 MLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDML 512
+L G R +EA L+ G+ N TY + + +G L E +L M
Sbjct: 661 LLKVG-------RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713
Query: 513 FRGCPLDEITYNGLIKALCNAGAVDKG 539
GC +D N +++ L G + +
Sbjct: 714 DNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 204 APNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIH 263
+ LF M+ G+ P V T+ ++ C+ ++D A LL M G PN+V Y TLI+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 264 ALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTP 323
K +R+ +AL+L +EM G + D+ T+N ++ GL + R A +L R+ G
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 324 DDITYGVLMHGLCRTGRVDEARALLNKIPSANVVL----LNTVINGYVISGRFDEAKAIF 379
+ TY +++HGLC+ D+A + + ++ L N +I+ + GR DEAK +F
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 380 YDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCK 439
+ S G +P+ +T+ ++ + Q +L +M GC + +V +
Sbjct: 675 V-AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 440 EGQLEKANIIINEMLAKGLSLNT 462
G++ +A ++ + K SL
Sbjct: 734 RGEITRAGTYLSMIDEKHFSLEA 756
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 263/540 (48%), Gaps = 18/540 (3%)
Query: 150 SLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFY 209
S++ ++++ Y R G+ Q + + + +YG P+ + N +L +V +
Sbjct: 124 SVYDILIRVYLREGMI-QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 182
Query: 210 DMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSN 269
+ML + I P V TF +++ LC + + L++ M K G P V Y T++H K
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 270 RVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYG 329
R A+ LL+ M G +DV T+N +IH LC+ NRI + L+ M R P+++TY
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 330 VLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLS 385
L++G G+V A LLN++ S N V N +I+G++ G F EA +FY M +
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY-MMEA 361
Query: 386 VGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEK 445
G P ++ +L+ GLCK F A M G +TYT ++DG CK G L++
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 446 ANIIINEMLAKGL--------SLNTG----DRIEEALGLYQDMLLEGVTANTVTYNTLIH 493
A +++NEM G+ +L G R + A + + G++ N + Y+TLI+
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481
Query: 494 AFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKP 553
R G L EA ++ M+ G D T+N L+ +LC AG V + M GI P
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Query: 554 SSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLF 613
+++S + LING + + A +M G P TY SL+ GLCK G ++EA
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 614 DKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
L A D V YNTL++ K G A + + V +P+ T+ L+ L ++
Sbjct: 602 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 238/498 (47%), Gaps = 29/498 (5%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G PT +YN VL K A L M SKG+ V T+ +++ LC N +
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 282
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
LLRDM K PN V Y TLI+ S +V A LL EM+ G + + TFN +I G
Sbjct: 283 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 342
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANV--- 356
EA K+ M +G TP +++YGVL+ GLC+ D AR ++ V
Sbjct: 343 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 402
Query: 357 -VLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELV 415
+ +I+G +G DEA + + M G PD+ T++ LI+G CK RF +A E+V
Sbjct: 403 RITYTGMIDGLCKNGFLDEA-VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Query: 416 NAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQD 475
+ G PN + Y+ L+ C+ G L +EA+ +Y+
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCL-----------------------KEAIRIYEA 498
Query: 476 MLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGA 535
M+LEG T + T+N L+ + + G + EA + + M G + ++++ LI N+G
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 536 VDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNS 595
K +F+EM + G P+ + L+ GLC+ A +FL+ + D V YN+
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 596 LINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANG 655
L+ +CK G + +A++LF ++ I PD+ TY +LIS ++G A L + A G
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 656 FV-PNDATWYILVRNLVK 672
V PN + V + K
Sbjct: 679 NVLPNKVMYTCFVDGMFK 696
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 213/433 (49%), Gaps = 17/433 (3%)
Query: 251 CVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAA 310
C N VY LI + + ++L + M L G V T N ++ + K
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 311 KLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVLLNTVINGY 366
+ ML R PD T+ +L++ LC G +++ L+ K+ + +V NTV++ Y
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 367 VISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPN 426
GRF A + D M S G DV T+N+LIH LC+ R L+ M + PN
Sbjct: 239 CKKGRFKAAIELL-DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 427 IVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLN------------TGDRIEEALGLYQ 474
VTY L++GF EG++ A+ ++NEML+ GLS N + +EAL ++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 475 DMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAG 534
M +G+T + V+Y L+ + A M G + ITY G+I LC G
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 535 AVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYN 594
+D+ + L EM + GI P ++ + LING C+ + TA E + + GL+P+ + Y+
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 595 SLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVAN 654
+LI C+MGC++EA+ +++ + EG D T+N L++ K G +A + ++
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 655 GFVPNDATWYILV 667
G +PN ++ L+
Sbjct: 538 GILPNTVSFDCLI 550
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 167/679 (24%), Positives = 280/679 (41%), Gaps = 128/679 (18%)
Query: 117 YYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMK 176
Y VL+D L N EF + ++MK G+ + ++ + G +A LL +M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM- 429
Query: 177 SVYGCQPTFRSYNVVLD--------------------VLVAGN---------------CH 201
S G P +Y+ +++ V ++ N C
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 202 KVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTL 261
K A ++ M+ +G + +TF V++ +LC +V A +R MT G +PN+V + L
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 262 IHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAK---------- 311
I+ S +A + +EM +G T+ ++ GLCK + EA K
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 312 -------------------------LVDRMLVRGFTPDDITYGVLMHGLCRTGR------ 340
L M+ R PD TY L+ GLCR G+
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 341 -VDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILI 399
EA A N +P N V+ ++G +G++ +A F + M ++G PD+ T N +I
Sbjct: 670 FAKEAEARGNVLP--NKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMI 726
Query: 400 HGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA-----NIIINEML 454
G + + +L+ M + PN+ TY IL+ G+ K + + +II+N +L
Sbjct: 727 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 786
Query: 455 AKGLSLNT-------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKL 507
L+ ++ + +E L + + + GV + T+N LI G ++ A L
Sbjct: 787 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 508 VNDMLFRGCPLDEIT-----------------------------------YNGLIKALCN 532
V M G LD+ T Y GLI LC
Sbjct: 847 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 533 AGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVT 592
G + + EEM+ I P +++ + ++ L + KA+ A LR M+ L P I +
Sbjct: 907 VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966
Query: 593 YNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGV 652
+ +L++ CK G + EAL L + G+ D V+YN LI+ +G AF + +
Sbjct: 967 FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1026
Query: 653 ANGFVPNDATWYILVRNLV 671
+GF+ N T+ L+R L+
Sbjct: 1027 GDGFLANATTYKALIRGLL 1045
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 350 KIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFG 409
++ ++N + + +I Y+ G ++ IF M G P V+T N ++ + K
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDV 175
Query: 410 SALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEA 469
S + M + P++ T+ IL++ C EG EK++ ++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM------------------- 216
Query: 470 LGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKA 529
Q M G VTYNT++H + ++G A +L++ M +G D TYN LI
Sbjct: 217 ----QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 530 LCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPD 589
LC + + KG L +M ++ I P+ ++ N LING K A + L +M+ GL+P+
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Query: 590 IVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILH 649
VT+N+LI+G G +EAL +F ++A+G+ P V+Y L+ K FD A
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392
Query: 650 KGVANGFVPNDATWYILVRNLVK 672
+ NG T+ ++ L K
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCK 415
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 207/486 (42%), Gaps = 57/486 (11%)
Query: 155 IMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLV-AGNCHKVAPNLFYDMLS 213
++K +GG +A + L + +V T YN +L + +GN K A +LF +M+
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM-YNTLLTAMCKSGNLAK-AVSLFGEMVQ 641
Query: 214 KGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCV-PNSVVYQTLIHALSKSNRVS 272
+ I P YT+ ++ LC + A ++ G V PN V+Y + + K+ +
Sbjct: 642 RSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701
Query: 273 EALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLM 332
+ E+M +G T D+ T N +I G ++ +I + L+ M + P+ TY +L+
Sbjct: 702 AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Query: 333 HGLCRTGRVDEARALLNKIPSANVV----LLNTVINGYVISGRFDEAKAIFYDSMLSVGC 388
HG + V + L I ++ ++++ G S + I + + G
Sbjct: 762 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL-KAFICRGV 820
Query: 389 IPDVFTFNILIHGLC-----------------------------------KQRRFGSALE 413
D +TFN+LI C + RF +
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL------------SLN 461
+++ M+ +G P Y L++G C+ G ++ A ++ EM+A + +L
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940
Query: 462 TGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEI 521
+ +EA L + ML + ++ TL+H + G++ EA +L M G LD +
Sbjct: 941 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000
Query: 522 TYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALE-FLRD 580
+YN LI LC G + L+EEM G ++ + LI GL A + + L+D
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKD 1060
Query: 581 MIHRGL 586
++ RG
Sbjct: 1061 LLARGF 1066
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%)
Query: 513 FRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKAN 572
+R C + Y+ LI+ G + L +F M G PS +CN ++ + ++ +
Sbjct: 116 YRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 175
Query: 573 TALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLI 632
+ FL++M+ R + PD+ T+N LIN LC G +++ L K++ G P VTYNT++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 633 SWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
W+ K+G F A +L + G + T+ +L+ +L +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%)
Query: 593 YNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGV 652
Y+ LI + G IQ++L +F + G P T N ++ K G + L + +
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 653 ANGFVPNDATWYILVRNLVKEINMESWNF 681
P+ AT+ IL+ L E + E ++
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSY 214
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/614 (28%), Positives = 296/614 (48%), Gaps = 36/614 (5%)
Query: 84 LCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEE 143
LCK+ RL +E+ + S + HT Y +LID L + ++ +M
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDN--HT---YSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 144 GIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCH-- 201
GI + ++ + + GV +A + L D G P ++Y L+ G C
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKA-KALFDGMIASGLIPQAQAYAS----LIEGYCREK 396
Query: 202 --KVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQ 259
+ L +M + I + YT+G V+K +C ++D A +++++M GC PN V+Y
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 260 TLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVR 319
TLI +++R +A+ +L+EM G D+ +N +I GL K R+ EA + M+
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 320 GFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEA 375
G P+ TYG + G A + ++ N VL +IN Y G+ EA
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 376 KAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVD 435
+ Y SM+ G + D T+ +L++GL K + A E+ M KG P++ +Y +L++
Sbjct: 577 CSA-YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 436 GFCKEGQLEKANIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTA 483
GF K G ++KA+ I +EM+ +GL+ N IE+A L +M ++G+
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 484 NTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLF 543
N VTY T+I + + G L EA +L ++M +G D Y L+ C V++ + +F
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 544 EEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIH----RGLTPDIVTYNSLING 599
+KG S+ N LIN + + K E L ++ R P+ VTYN +I+
Sbjct: 756 G-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 600 LCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPN 659
LCK G ++ A LF ++Q + P +TY +L++ + K G + F + + +A G P+
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 660 DATWYILVRNLVKE 673
+ +++ +KE
Sbjct: 875 HIMYSVIINAFLKE 888
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/553 (27%), Positives = 261/553 (47%), Gaps = 55/553 (9%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G P +Y+V++D L + A +L +M S G+S +T+ +++ L D+A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
L+ +M HG +Y I +SK + +A L + MI G Q + +I G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----N 355
C+ + + +L+ M R TYG ++ G+C +G +D A ++ ++ ++ N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 356 VVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELV 415
VV+ T+I ++ + RF +A + + M G PD+F +N LI GL K +R A +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKE-MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 416 NAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLN----TG-------- 463
M G +PN TY + G+ + + A+ + EM G+ N TG
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 464 DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITY 523
++ EA Y+ M+ +G+ + TY L++ + + +A ++ +M +G D +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 524 NGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIH 583
LI G + K +F+EM+ +G+ P+ I N+L+ G CR+ + A E L +M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 584 RGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTY--------------- 628
+GL P+ VTY ++I+G CK G + EA LFD+++ +G+ PD+ Y
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 629 -------------------NTLISWHFKEGLFDDAFLILHKGVANGF----VPNDATWYI 665
N LI+W FK G + +L++ + F PND T+ I
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 666 LVRNLVKEINMES 678
++ L KE N+E+
Sbjct: 811 MIDYLCKEGNLEA 823
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 220/473 (46%), Gaps = 17/473 (3%)
Query: 211 MLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNR 270
M+ KG+ P YT+ V++ LC + ++ A SLL +M G ++ Y LI L K
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 271 VSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGV 330
A L+ EM+ G ++ I + K + +A L D M+ G P Y
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 331 LMHGLCRTGRVDEARALLNKIPSANVVL----LNTVINGYVISGRFDEAKAIFYDSMLSV 386
L+ G CR V + LL ++ N+V+ TV+ G SG D A I + M++
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE-MIAS 446
Query: 387 GCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA 446
GC P+V + LI + RFG A+ ++ M +G P+I Y L+ G K ++++A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 447 NIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHA 494
+ EM+ GL N A ++M GV N V LI+
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 495 FLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPS 554
+ ++G + EA M+ +G D TY L+ L VD +F EM KGI P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 555 SISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFD 614
S +LING + A +M+ GLTP+++ YN L+ G C+ G I++A L D
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 615 KLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILV 667
++ +G++P+AVTY T+I + K G +AF + + G VP+ + LV
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/571 (26%), Positives = 267/571 (46%), Gaps = 28/571 (4%)
Query: 117 YYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMK 176
Y LI+ K + +L++MK+ I+ + ++K G A ++ +M
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 177 SVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEV 236
+ GC+P Y ++ + + A + +M +GI+P ++ + ++ L +
Sbjct: 445 A-SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 237 DSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDV 296
D A S L +M ++G PN+ Y I +++ + A ++EM G + +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 297 IHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA----RALLNKIP 352
I+ CK ++ EA M+ +G D TY VLM+GL + +VD+A R + K
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 353 SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSAL 412
+ +V +ING+ G +A +IF D M+ G P+V +N+L+ G C+ A
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIF-DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 413 ELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNTG- 463
EL++ M+VKG PN VTY ++DG+CK G L +A + +EM KGL +L G
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 464 ---DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLF----RGC 516
+ +E A+ ++ +G ++T +N LI+ + G +++N ++ R
Sbjct: 743 CRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 517 PLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALE 576
+++TYN +I LC G ++ LF +M + P+ I+ L+NG + +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 577 FLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAV-----TYNTL 631
+ I G+ PD + Y+ +IN K G +AL L D++ A+ D T L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 632 ISWHFKEGLFDDAFLILHKGVANGFVPNDAT 662
+S K G + A ++ V ++P+ AT
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 231/513 (45%), Gaps = 28/513 (5%)
Query: 147 CRESLFIL--IMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVA 204
CR ++ I ++K + + G A R+L +MK G P YN ++ L A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 205 PNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHA 264
+ +M+ G+ P +T+G + +E SA +++M + G +PN V+ LI+
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 265 LSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPD 324
K +V EA M+ G D +T+ +++GL K +++ +A ++ M +G PD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 325 DITYGVLMHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRFDEAKAIFY 380
+YGVL++G + G + +A ++ +++ + NV++ N ++ G+ SG ++AK +
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL- 685
Query: 381 DSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKE 440
D M G P+ T+ +I G CK A L + M +KG P+ YT LVDG C+
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 441 GQLEKANIII--------------NEMLAKGLSLNTGDRIEEALGLYQDMLLEGV-TANT 485
+E+A I N ++ + E L D + N
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 486 VTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEE 545
VTYN +I + G+L A +L + M ITY L+ G + +F+E
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 546 MMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPD-----IVTYNSLINGL 600
+ GI+P I +++IN + AL + M + D I T +L++G
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 601 CKMGCIQEALNLFDKLQAEGIYPDAVTYNTLIS 633
K+G ++ A + + + PD+ T LI+
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 225/499 (45%), Gaps = 42/499 (8%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P V+LD L+ N + +++ M+ + + V T+ +++ A C V
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ----- 238
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
+ V+++T + + V AL L E MI G T++ +I GLCK
Sbjct: 239 ---------LGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANV----VL 358
+ R+ +A L+ M G + D+ TY +L+ GL + D A+ L++++ S + +
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
+ I G ++AKA+F D M++ G IP + LI G C+++ EL+ M
Sbjct: 350 YDCCICVMSKEGVMEKAKALF-DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
+ + TY +V G C G L+ A I+ EM+A G
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG--------------------- 447
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
N V Y TLI FL+ +A +++ +M +G D YN LI L A +D+
Sbjct: 448 --CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
EM+ G+KP++ + I+G + +A +++++M G+ P+ V LIN
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVP 658
CK G + EA + + + +GI DA TY L++ FK DDA I + G P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 659 NDATWYILVRNLVKEINME 677
+ ++ +L+ K NM+
Sbjct: 626 DVFSYGVLINGFSKLGNMQ 644
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 189/423 (44%), Gaps = 25/423 (5%)
Query: 250 GCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEA 309
G + V++ L + EA+ + + + + ++ L + NR+
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 310 AKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA-NVVLLNTVINGYVI 368
+ M+ R D TY +L+ CR G V + +L K LN
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNV------- 258
Query: 369 SGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIV 428
+ +SM+ G +P +T+++LI GLCK +R A L+ M G +
Sbjct: 259 -----DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 429 TYTILVDGFCKEGQLEKANIIINEMLAKGLS------------LNTGDRIEEALGLYQDM 476
TY++L+DG K + A +++EM++ G++ ++ +E+A L+ M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 477 LLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAV 536
+ G+ Y +LI + R ++ + ++L+ +M R + TY ++K +C++G +
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 537 DKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSL 596
D + +EM+ G +P+ + LI + + A+ L++M +G+ PDI YNSL
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 597 INGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGF 656
I GL K + EA + ++ G+ P+A TY IS + + F A + + G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 657 VPN 659
+PN
Sbjct: 554 LPN 556
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 180/441 (40%), Gaps = 79/441 (17%)
Query: 290 VQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLN 349
+ +F+ + LC +A +V+RM+ R + ++ ++ G+ D+
Sbjct: 97 LDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDG----- 151
Query: 350 KIPSANVVLLNTVINGYVISGRFDEAKAIF------------------------------ 379
VL + +GY+ G +EA +F
Sbjct: 152 -------VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 380 ----YDSMLSVGCIPDVFTFNILIHGLCK--------------QRRFGS-------ALEL 414
Y M+ + DV T+++LI C+ ++ F + AL+L
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264
Query: 415 VNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------ 462
+M KG P TY +L+DG CK +LE A ++ EM + G+SL+
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 463 GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEIT 522
G + A GL +M+ G+ Y+ I + G + +A L + M+ G
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 523 YNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMI 582
Y LI+ C V +G L EM ++ I S + ++ G+C + + A +++MI
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 583 HRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFD 642
G P++V Y +LI + +A+ + +++ +GI PD YN+LI K D
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 643 DAFLILHKGVANGFVPNDATW 663
+A L + V NG PN T+
Sbjct: 505 EARSFLVEMVENGLKPNAFTY 525
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 182 QPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACS 241
+P +YN+++D L + A LF+ M + + PTV T+ ++ +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 242 LLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILM-----GCTSDVQTFNDV 296
+ + G P+ ++Y +I+A K ++AL+L+++M GC + T +
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 297 IHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLC 336
+ G KV + A K+++ M+ + PD T L++ C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 40/220 (18%)
Query: 499 GSLHEAHKLVNDMLFRGCPL-------------------DEITYNGLIKALCNAGAVDKG 539
GS +A +V M+ R P+ D + + L G +++
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA 170
Query: 540 LGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLING 599
+ +F M + P C +L++ L R + + + + M+ R + D+ TY+ LI
Sbjct: 171 VFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIA 230
Query: 600 LCKMGCIQ---------------------EALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
C+ G +Q AL L + + +G+ P TY+ LI K
Sbjct: 231 HCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKI 290
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES 678
+DA +L + + G ++ T+ +L+ L+K N ++
Sbjct: 291 KRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 177/646 (27%), Positives = 298/646 (46%), Gaps = 52/646 (8%)
Query: 72 LRKSLHKITPFQLCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFK 131
L+ + I+P + L L LD T++ W Y H+ Y L+ L N
Sbjct: 81 LKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 140
Query: 132 VIDSVLLQMKEEGIICRESLFIL-------------------------IMKYYGRGGVPG 166
V+ + L M + ++L++L ++ R G+
Sbjct: 141 VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVD 200
Query: 167 QATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCH----KVAPNLFYDMLSKGISPTVYT 222
+ ++ ++M C P +YN +V G C + A ++ G+ P +T
Sbjct: 201 EMKQVYMEMLEDKVC-PNIYTYNK----MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 223 FGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMI 282
+ ++ C ++DSA + +M GC N V Y LIH L + R+ EA+ L +M
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 283 LMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVD 342
C V+T+ +I LC R EA LV M G P+ TY VL+ LC + +
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 343 EARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNIL 398
+AR LL ++ NV+ N +INGY G ++A + + M S P+ T+N L
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNEL 434
Query: 399 IHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL 458
I G CK A+ ++N M + P++VTY L+DG C+ G + A +++ M +GL
Sbjct: 435 IKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 459 ------------SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHK 506
SL R+EEA L+ + +GV N V Y LI + + G + EAH
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 507 LVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLC 566
++ ML + C + +T+N LI LC G + + L E+M++ G++P+ + ILI+ L
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 567 RTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAV 626
+ + A + M+ G PD TY + I C+ G + +A ++ K++ G+ PD
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 627 TYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
TY++LI + G + AF +L + G P+ T+ L+++L++
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/624 (25%), Positives = 282/624 (45%), Gaps = 43/624 (6%)
Query: 93 DVDTSMEIFTWAGSQEGYCHTFDVYYV-LIDKLGANKEFKVIDSVLLQMKEEGIICRESL 151
D+D++ ++F + C +V Y LI L + + ++MK++
Sbjct: 268 DLDSAFKVFNEMPLKG--CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 152 FILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDM 211
+ +++K +A L+ +M+ G +P +Y V++D L + + A L M
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEET-GIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 212 LSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRV 271
L KG+ P V T+ ++ C ++ A ++ M PN+ Y LI KSN V
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-V 443
Query: 272 SEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVL 331
+A+ +L +M+ DV T+N +I G C+ A +L+ M RG PD TY +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 332 MHGLCRTGRVDEARALLNKIP----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVG 387
+ LC++ RV+EA L + + + NVV+ +I+GY +G+ DEA + + MLS
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH-LMLEKMLSKN 562
Query: 388 CIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKAN 447
C+P+ TFN LIHGLC + A L M G +P + T TIL+ K+G + A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 448 IIINEMLAKGLSLNTGD------------RIEEALGLYQDMLLEGVTANTVTYNTLIHAF 495
+ML+ G + R+ +A + M GV+ + TY++LI +
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 496 LRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIK------------------ALCNAGAVD 537
G + A ++ M GC + T+ LIK A+ N D
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 538 KGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHR--GLTPDIVTYNS 595
+ L E+M+ + P++ S LI G+C A E + D + R G++P + +N+
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA-EKVFDHMQRNEGISPSELVFNA 801
Query: 596 LINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANG 655
L++ CK+ EA + D + G P + LI +K+G + + + G
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Query: 656 FVPNDATWYILVRNLVKEINMESW 679
+ ++ W I++ + K+ +E++
Sbjct: 862 YYEDELAWKIIIDGVGKQGLVEAF 885
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/552 (26%), Positives = 249/552 (45%), Gaps = 38/552 (6%)
Query: 116 VYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDM 175
Y VLID L + +F+ +L QM E+G++ + ++ Y + G+ A ++ M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 176 KSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNE 235
+S P R+YN ++ N HK A + ML + + P V T+ ++ C
Sbjct: 420 ES-RKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 236 VDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFND 295
DSA LL M G VP+ Y ++I +L KS RV EA L + + G +V +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 296 VIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARAL---LNKIP 352
+I G CK ++ EA ++++ML + P+ +T+ L+HGLC G++ EA L + KI
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 353 SANVVLLNTV-INGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSA 411
V +T+ I+ + G FD A + F MLS G PD T+ I C++ R A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRF-QQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 412 LELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG-------------- 457
+++ M G P++ TY+ L+ G+ GQ A ++ M G
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 458 -LSLNTGDR---------------IEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSL 501
L + G + + + L + M+ VT N +Y LI G+L
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 502 HEAHKLVNDMLF-RGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNI 560
A K+ + M G E+ +N L+ C ++ + ++M+ G P SC +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 561 LINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEG 620
LI GL + + ++++ G D + + +I+G+ K G ++ LF+ ++ G
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Query: 621 IYPDAVTYNTLI 632
+ TY+ LI
Sbjct: 897 CKFSSQTYSLLI 908
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 17/366 (4%)
Query: 324 DDITYGVLMHGLCRTGRVDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSM 383
D + + + LCR DE L K+ + NT++N G DE K ++ + M
Sbjct: 154 DSVGDALYVLDLCRKMNKDERFELKYKLI---IGCYNTLLNSLARFGLVDEMKQVYME-M 209
Query: 384 LSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQL 443
L P+++T+N +++G CK A + V+ + G +P+ TYT L+ G+C+ L
Sbjct: 210 LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 444 EKANIIINEMLAKGLSLN------------TGDRIEEALGLYQDMLLEGVTANTVTYNTL 491
+ A + NEM KG N RI+EA+ L+ M + TY L
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 492 IHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGI 551
I + EA LV +M G + TY LI +LC+ +K L +M+ KG+
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 552 KPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALN 611
P+ I+ N LING C+ A++ + M R L+P+ TYN LI G CK + +A+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMG 448
Query: 612 LFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLV 671
+ +K+ + PD VTYN+LI + G FD A+ +L G VP+ T+ ++ +L
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 672 KEINME 677
K +E
Sbjct: 509 KSKRVE 514
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 24/280 (8%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G +P +Y + A ++ M G+SP ++T+ ++K + + + A
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIH------------------ALSKSNRVSEALMLLEEM 281
+L+ M GC P+ + +LI A+S + LLE+M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 282 ILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLV-RGFTPDDITYGVLMHGLCRTGR 340
+ T + +++ +I G+C+V + A K+ D M G +P ++ + L+ C+ +
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 341 VDEARALLNK-IPSANVVLLNT---VINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFN 396
+EA +++ I ++ L + +I G G + ++F ++L G D +
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF-QNLLQCGYYEDELAWK 870
Query: 397 ILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDG 436
I+I G+ KQ + EL N M GC+ + TY++L++G
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 172 LLDMKSVYGCQPTFRSY-NVVLDVLVAGNCHKVAPNLFYDML-SKGISPTVYTFGVVMKA 229
LL+ + P +SY ++L + GN +VA +F M ++GISP+ F ++
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNL-RVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 230 LCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSD 289
C + + + A ++ DM G +P + LI L K + + ++ G D
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 290 VQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHG 334
+ +I G+ K + +L + M G TY +L+ G
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 565 LCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPD 624
LCR + E +I I YN+L+N L + G + E ++ ++ + + P+
Sbjct: 165 LCRKMNKDERFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 625 AVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES 678
TYN +++ + K G ++A + K V G P+ T+ L+ + +++S
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 55/132 (41%)
Query: 168 ATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVM 227
A ++ M+ G P+ +N +L H A + DM+ G P + + V++
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 228 KALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCT 287
L E + S+ +++ + G + + ++ +I + K V L M GC
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Query: 288 SDVQTFNDVIHG 299
QT++ +I G
Sbjct: 899 FSSQTYSLLIEG 910
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 270/516 (52%), Gaps = 30/516 (5%)
Query: 172 LLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALC 231
L+D + + +N+VLD C ++ N GI+ +YT +++ C
Sbjct: 88 LVDFSRFFSAIARTKQFNLVLDF-----CKQLELN--------GIAHNIYTLNIMINCFC 134
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+ A S+L + K G P++ + TLI L +VSEA++L++ M+ GC DV
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
T+N +++G+C+ A L+ +M R D TY ++ LCR G +D A +L ++
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 352 PS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
+ ++VV N+++ G +G++++ A+ M+S +P+V TFN+L+ K+ +
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDG-ALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG--------LS 459
A EL M +G PNI+TY L+DG+C + +L +AN +++ M+ S
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 460 LNTG----DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRG 515
L G R+++ + +++++ G+ AN VTY+ L+ F + G + A +L +M+ G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 516 CPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTAL 575
D +TY L+ LC+ G ++K L +FE++ + + + +I G+C+ K A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 576 EFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWH 635
+ +G+ P+++TY +I+GLCK G + EA L K++ +G P+ TYNTLI H
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 636 FKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLV 671
++G + ++ + + GF + ++ +++ L+
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 244/481 (50%), Gaps = 17/481 (3%)
Query: 204 APNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIH 263
A LF +M+ P++ F A+ + + + + +G N +I+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 264 ALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTP 323
+ + A +L +++ +G D TFN +I GL ++ EA LVDRM+ G P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 324 DDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIF 379
D +TY +++G+CR+G A LL K+ A+V +T+I+ G D A ++F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 380 YDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCK 439
+ M + G V T+N L+ GLCK ++ L+ M + PN++T+ +L+D F K
Sbjct: 252 KE-METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 440 EGQLEKANIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVT 487
EG+L++AN + EM+ +G+S N +R+ EA + M+ + + VT
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 488 YNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMM 547
+ +LI + + + K+ ++ RG + +TY+ L++ C +G + LF+EM+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 548 RKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQ 607
G+ P ++ IL++GLC K ALE D+ + IV Y ++I G+CK G ++
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 608 EALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILV 667
+A NLF L +G+ P+ +TY +IS K+G +A ++L K +G PND T+ L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 668 R 668
R
Sbjct: 551 R 551
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 207/411 (50%), Gaps = 17/411 (4%)
Query: 171 LLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKAL 230
+L+D GCQP +YN +++ + +A +L M + + V+T+ ++ +L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 231 CMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDV 290
C +D+A SL ++M G + V Y +L+ L K+ + ++ +LL++M+ +V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 291 QTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNK 350
TFN ++ K ++ EA +L M+ RG +P+ ITY LM G C R+ EA +L+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 351 IP----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQR 406
+ S ++V ++I GY + R D+ +F + + G + + T++IL+ G C+
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN-ISKRGLVANAVTYSILVQGFCQSG 417
Query: 407 RFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLN----- 461
+ A EL M G P+++TY IL+DG C G+LEKA I ++ + L
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 462 -------TGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFR 514
G ++E+A L+ + +GV N +TY +I ++GSL EA+ L+ M
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 515 GCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGL 565
G ++ TYN LI+A G + L EEM G + S ++I+ L
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 442 QLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSL 501
+ N+ E L G+ + ++A+ L+Q+M+ + V ++ A R
Sbjct: 48 SISNGNVCFRERLRSGI---VDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 104
Query: 502 HEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNIL 561
+ + G + T N +I C + ++M+ G +P + + N L
Sbjct: 105 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 164
Query: 562 INGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLING---------------------- 599
I GL K + A+ + M+ G PD+VTYNS++NG
Sbjct: 165 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 600 -------------LCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
LC+ GCI A++LF +++ +GI VTYN+L+ K G ++D L
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 647 ILHKGVANGFVPNDATWYILVRNLVKEINMESWN 680
+L V+ VPN T+ +L+ VKE ++ N
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 231/450 (51%), Gaps = 28/450 (6%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ + +L V+ N + V +LF M GI P + T +VM +C+ ++ A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V + +L++ NR+ +A+ L ++++ MG +V T+ +I LCK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA----RALLNKIPSANVVL 358
++ A +L ++M G P+ +TY L+ GLC GR +A R ++ + NV+
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
+I+ +V G+ EAK + Y+ M+ + PDVFT+ LI+GLC A ++ M
Sbjct: 261 FTALIDAFVKVGKLMEAKEL-YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
GC PN V YT L+ GFCK R+E+ + ++ +M
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKS-----------------------KRVEDGMKIFYEMSQ 356
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
+GV ANT+TY LI + G A ++ N M R P D TYN L+ LC G V+K
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
L +FE M ++ + + ++ I+I G+C+ K A + + +G+ P+++TY ++I+
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPDAVTY 628
G C+ G I EA +LF K++ +G P+ Y
Sbjct: 477 GFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 230/445 (51%), Gaps = 17/445 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+ + A L M +P+ + + L+ ++K NR + L E+M ++G + T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP-- 352
V+H +C ++ A+ + +M+ GF PD +T+ L++G C R+++A AL ++I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 353 --SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
NVV T+I + + A +F + M + G P+V T+N L+ GLC+ R+G
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELF-NQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNT 462
A L+ M + EPN++T+T L+D F K G+L +A + N M+ + SL
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 463 G----DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
G ++EA ++ M G N V Y TLIH F + + + K+ +M +G
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
+ ITY LI+ C G D +F +M + P + N+L++GLC K AL
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
M R + +IVTY +I G+CK+G +++A +LF L ++G+ P+ +TY T+IS +
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 639 GLFDDAFLILHKGVANGFVPNDATW 663
GL +A + K +GF+PN++ +
Sbjct: 482 GLIHEADSLFKKMKEDGFLPNESVY 506
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 24/337 (7%)
Query: 332 MHGLCRTGRVDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPD 391
+H L +D +++ P +++ +++ R+D ++F + M +G P
Sbjct: 59 LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF-EQMQILGIPPL 117
Query: 392 VFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIIN 451
+ T NI++H +C + A + M G EP++VT+T L++G+C
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH------------ 165
Query: 452 EMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDM 511
+RIE+A+ L+ +L G N VTY TLI + L+ A +L N M
Sbjct: 166 -----------WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 512 LFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKA 571
G + +TYN L+ LC G L +MM++ I+P+ I+ LI+ + K
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 572 NTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTL 631
A E MI + PD+ TY SLINGLC G + EA +F ++ G YP+ V Y TL
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 632 ISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVR 668
I K +D I ++ G V N T+ +L++
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 6/272 (2%)
Query: 163 GVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYT 222
G G A LL DM +P ++ ++D V A L+ M+ + P V+T
Sbjct: 237 GRWGDAAWLLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 223 FGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMI 282
+G ++ LCM +D A + M ++GC PN V+Y TLIH KS RV + + + EM
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 283 LMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVD 342
G ++ T+ +I G C V R A ++ ++M R PD TY VL+ GLC G+V+
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 343 EARALLNKIPSA----NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNIL 398
+A + + N+V +I G G+ ++A +F S+ S G P+V T+ +
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC-SLFSKGMKPNVITYTTM 474
Query: 399 IHGLCKQRRFGSALELVNAMAVKGCEPNIVTY 430
I G C++ A L M G PN Y
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 144/307 (46%), Gaps = 24/307 (7%)
Query: 371 RFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTY 430
+F++A +F M+ +P + F L+ + K R+ + L M + G P + T
Sbjct: 63 QFNDALDLF-TRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 431 TILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNT 490
I++ C Q +A+ + +M+ LG D+ VT+ +
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMK--------------LGFEPDL---------VTFTS 158
Query: 491 LIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKG 550
L++ + + +A L + +L G + +TY LI+ LC ++ + LF +M G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 551 IKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEAL 610
+P+ ++ N L+ GLC + A LRDM+ R + P+++T+ +LI+ K+G + EA
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 611 NLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNL 670
L++ + +YPD TY +LI+ GL D+A + + NG PN+ + L+
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 671 VKEINME 677
K +E
Sbjct: 339 CKSKRVE 345
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 116 VYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDM 175
+Y LI +K + + +M ++G++ + ++++ Y G P A + M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 176 KSVYGCQPTFRSYNVVLD-------------------------------VLVAGNCH--K 202
S P R+YNV+LD +++ G C K
Sbjct: 390 SSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 203 V--APNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQ 259
V A +LF + SKG+ P V T+ ++ C + A SL + M + G +PN VY+
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>sp|Q84VG6|PP160_ARATH Pentatricopeptide repeat-containing protein At2g17525,
mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2
SV=2
Length = 626
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 282/568 (49%), Gaps = 30/568 (5%)
Query: 87 LLRLPLDVDTS---MEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEE 143
++RL LD ++ +E F WA + G+ H+ Y L KL + F + +L +M +
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 144 -GIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHK 202
G+ +++F+ I++ +GR + + ++ D+ S +G +P+ + +N +LDVLV +
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVV-DLVSKFGIKPSLKVFNSILDVLVKEDIDI 164
Query: 203 VAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLI 262
M++ GI VYT+G++MK L + N + LL+ M G PN+VVY TL+
Sbjct: 165 AREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLL 224
Query: 263 HALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFT 322
HAL K+ +V A L+ EM +DV TFN +I C ++ ++ L+++ GF
Sbjct: 225 HALCKNGKVGRARSLMSEM---KEPNDV-TFNILISAYCNEQKLIQSMVLLEKCFSLGFV 280
Query: 323 PDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAI 378
PD +T +M LC GRV EA +L ++ S +VV NT++ GY G+ A+
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 379 FYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFC 438
F + M G +P+V T+N+LI G C SAL+ N M N T+ L+ G
Sbjct: 341 FIE-MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 399
Query: 439 KEGQLEKANIIINEMLAKGLSLNTGDRIEE----ALGLYQD----------MLLEGVTAN 484
G+ + I+ EM+ +++ G RI+ G Y++ + +E +
Sbjct: 400 IGGRTDDGLKIL-EMMQDSDTVH-GARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPR 457
Query: 485 TVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFE 544
V + + + +G + + + M+ G I + LI G +++ L L
Sbjct: 458 AVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIN 517
Query: 545 EMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMG 604
+M+ +G P S + N +I G C+ K ++F+ DM RG PD +YN L+ LC G
Sbjct: 518 DMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG 577
Query: 605 CIQEALNLFDKLQAEGIYPDAVTYNTLI 632
IQ+A LF ++ + I PD +++L+
Sbjct: 578 DIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 235/561 (41%), Gaps = 66/561 (11%)
Query: 170 RLLLDMKSVYGCQPTFR-------------SYNVVLDVLVAGNCHKVAPNLFYDML-SKG 215
RL+LD KS G TFR +Y + L L +M S G
Sbjct: 48 RLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIG 107
Query: 216 ISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEAL 275
+ P F +++ + S++ ++K G P+ V+ +++ L K +
Sbjct: 108 LPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIARE 167
Query: 276 MLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGL 335
+M+ G DV T+ ++ GL NRI + KL+ M G P+ + Y L+H L
Sbjct: 168 FFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHAL 227
Query: 336 CRTGRVDEARALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTF 395
C+ G+V AR+L++++ N V N +I+ Y + ++ + + S+G +PDV T
Sbjct: 228 CKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQS-MVLLEKCFSLGFVPDVVTV 286
Query: 396 NILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLA 455
++ LC + R ALE++ + KG + ++V LV G+C G++ A EM
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 456 KGLSLNTGD------------RIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHE 503
KG N ++ AL + DM + + N T+NTLI G +
Sbjct: 347 KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDD 406
Query: 504 AHKLVNDM----LFRGCPLDEITYNGLIK------------------------------- 528
K++ M G +D YN +I
Sbjct: 407 GLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFK 464
Query: 529 --ALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGL 586
+LC G +D +++M+ +G PS I + LI+ + K +LE + DM+ RG
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 587 TPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFL 646
P T+N++I G CK + + + + G PD +YN L+ +G A+L
Sbjct: 525 LPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWL 584
Query: 647 ILHKGVANGFVPNDATWYILV 667
+ + V VP+ + W L+
Sbjct: 585 LFSRMVEKSIVPDPSMWSSLM 605
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 255/536 (47%), Gaps = 44/536 (8%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G P ++N+++ L +C A LF +M KG P +TFG++++ C D
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
LL M G +PN V+Y T++ + + R ++ ++E+M G D+ TFN I
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 300 LCKVNRIHEAAKLVDRMLVRGF----TPDDITYGVLMHGLCRTGRVDEARALLNKIPS-- 353
LCK ++ +A+++ M + + P+ ITY +++ G C+ G +++A+ L I
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 354 --ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSA 411
A++ N + G V G+F EA+ + M G P ++++NIL+ GLCK A
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVL-KQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 412 LELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL------------S 459
+V M G P+ VTY L+ G+C G+++ A ++ EM+ S
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 460 LNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRG---- 515
L RI EA L + M +G +TVT N ++ G L +A ++V M G
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500
Query: 516 -------------------CPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSI 556
C D ITY+ L+ LC AG + LF EMM + ++P S+
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560
Query: 557 SCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKL 616
+ NI I+ C+ K ++A L+DM +G + TYNSLI GL I E L D++
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
Query: 617 QAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
+ +GI P+ TYNT I + + +DA +L + + PN ++ L+ K
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 239/498 (47%), Gaps = 55/498 (11%)
Query: 182 QPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACS 241
+P+ YN++L+ + + L+ DM+ GI+P YTF ++++ALC + VD+A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 242 LLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLC 301
L +M + GC PN + L+ K+ + L LL M G + +N ++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 302 KVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNK--------IPS 353
+ R ++ K+V++M G PD +T+ + LC+ G+V +A + + +P
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 354 ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALE 413
N + N ++ G+ G ++AK +F +S+ + + ++NI + GL + +F A
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLF-ESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLY 473
++ M KG P+I +Y IL+DG CK G L A I+ GL
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV------GL--------------- 386
Query: 474 QDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNA 533
M GV + VTY L+H + G + A L+ +M+ C + T N L+ +L
Sbjct: 387 --MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 534 GAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDM------------ 581
G + + L +M KG +++CNI+++GLC + + + A+E ++ M
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 582 -----------IHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNT 630
I PD++TY++L+NGLCK G EA NLF ++ E + PD+V YN
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 631 LISWHFKEGLFDDAFLIL 648
I K+G AF +L
Sbjct: 565 FIHHFCKQGKISSAFRVL 582
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/552 (27%), Positives = 252/552 (45%), Gaps = 60/552 (10%)
Query: 183 PTFRSYNVVLD-------VLVAGNCHKVAPNLFYDMLSKGISPT-VYTFGVVMKALCMVN 234
P+ S+ + LD +LV H+ L +LS I T + + V+ N
Sbjct: 30 PSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSN 89
Query: 235 EVDSAC---SLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
+D A L+R P+ +Y L+ + K RV L ++M+L G
Sbjct: 90 HIDKAFPQFQLVRSRFPEN-KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTY 148
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI 351
TFN +I LC + + A +L D M +G P++ T+G+L+ G C+ G D+ LLN +
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 352 PS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQ-- 405
S N V+ NT+++ + GR D+++ + + M G +PD+ TFN I LCK+
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV-EKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 406 ----RRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIII-----NEMLAK 456
R S +EL + + PN +TY +++ GFCK G LE A + N+ LA
Sbjct: 268 VLDASRIFSDMELDEYLGLP--RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 457 GLSLNT-------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVN 509
S N + EA + + M +G+ + +YN L+ + G L +A +V
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 510 DMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTR 569
M G D +TY L+ C+ G VD L +EMMR P++ +CNIL++ L +
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 570 KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEG--------- 620
+ + A E LR M +G D VT N +++GLC G + +A+ + ++ G
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 621 --------------IYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYIL 666
PD +TY+TL++ K G F +A + + + P+ + I
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 667 VRNLVKEINMES 678
+ + K+ + S
Sbjct: 566 IHHFCKQGKISS 577
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 230/502 (45%), Gaps = 43/502 (8%)
Query: 184 TFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLL 243
+ +SYN+ L LV A + M KGI P++Y++ ++M LC + + A +++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 244 RDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKV 303
M ++G P++V Y L+H +V A LL+EM+ C + T N ++H L K+
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 304 NRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVLLNTVI 363
RI EA +L+ +M +G+ D +T +++ GLC +G +D+A ++ + L +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 364 NGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGC 423
N Y+ + DS++ C+PD+ T++ L++GLCK RF A L M +
Sbjct: 505 NSYI---------GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Query: 424 EPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTA 483
+P+ V Y I + FCK+G +I A + +DM +G
Sbjct: 556 QPDSVAYNIFIHHFCKQG-----------------------KISSAFRVLKDMEKKGCHK 592
Query: 484 NTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLF 543
+ TYN+LI + + E H L+++M +G + TYN I+ LC V+ L
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 544 EEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMI-----HRGLTPDIVTYNSLIN 598
+EMM+K I P+ S LI C+ + A E + GL Y+ + N
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFN 706
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVP 658
L G + +A L + + G Y L+ K+ + A ILHK + G+
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 659 NDATWYILVRNLVKEINMESWN 680
+ A ++ L K N + N
Sbjct: 767 DPAALMPVIDGLGKMGNKKEAN 788
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 4/277 (1%)
Query: 181 CQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSAC 240
C P +Y+ +L+ L A NLF +M+ + + P + + + C ++ SA
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 241 SLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGL 300
+L+DM K GC + Y +LI L N++ E L++EM G + ++ T+N I L
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 301 CKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLN---KIPSANVV 357
C+ ++ +A L+D M+ + P+ ++ L+ C+ D A+ + I
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG 699
Query: 358 LLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNA 417
L + + N + +G+ +A + +++L G F + L+ LCK+ A +++
Sbjct: 700 LYSLMFNELLAAGQLLKATELL-EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 418 MAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEML 454
M +G + ++DG K G ++AN ++M+
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 38/242 (15%)
Query: 111 CH-TFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQAT 169
CH + + Y LI LG + I ++ +MKE+GI
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI------------------------ 625
Query: 170 RLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKA 229
P +YN + L G + A NL +M+ K I+P V++F +++A
Sbjct: 626 ------------SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 230 LCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSD 289
C V + D A + C +Y + + L + ++ +A LLE ++ G
Sbjct: 674 FCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELG 732
Query: 290 VQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLN 349
+ D++ LCK + + A+ ++ +M+ RG+ D ++ GL + G EA + +
Sbjct: 733 TFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFAD 792
Query: 350 KI 351
K+
Sbjct: 793 KM 794
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/640 (27%), Positives = 295/640 (46%), Gaps = 57/640 (8%)
Query: 53 DSESENEWERLLKPFDLNELRKSLHKITPFQLCK---------LLRLPLDVDTSMEIFTW 103
D+E ++ ++K LR+SL P++ CK L+++ D ++ F W
Sbjct: 55 DTEFVHQITNVIKLRRAEPLRRSLK---PYE-CKFKTDHLIWVLMKIKCDYRLVLDFFDW 110
Query: 104 AGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFI-----LIMKY 158
A S+ + ++I A+K+ KV S++ E + F+ L+ Y
Sbjct: 111 ARSRRD--SNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTY 168
Query: 159 YGRGGVPG----------------QATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHK 202
G P +A R+ M + YG + S NV L L + +C+K
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLN-YGLVLSVDSCNVYLTRL-SKDCYK 226
Query: 203 VAPNL--FYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQT 260
A + F + G+ V ++ +V+ +C + + A LL M G P+ + Y T
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 261 LIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRG 320
+++ + + + L+E M G + + +I LC++ ++ EA + M+ +G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 321 FTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAK 376
PD + Y L+ G C+ G + A ++ S +V+ +I+G+ G EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 377 AIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDG 436
+F++ M G PD TF LI+G CK A + N M GC PN+VTYT L+DG
Sbjct: 407 KLFHE-MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 437 FCKEGQLEKANIIINEMLAKGLSLN------------TGDRIEEALGLYQDMLLEGVTAN 484
CKEG L+ AN +++EM GL N IEEA+ L + G+ A+
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 485 TVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFE 544
TVTY TL+ A+ + G + +A +++ +ML +G +T+N L+ C G ++ G L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 545 EMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMG 604
M+ KGI P++ + N L+ C A +DM RG+ PD TY +L+ G CK
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 605 CIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDA 644
++EA LF +++ +G TY+ LI K F +A
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 232/467 (49%), Gaps = 17/467 (3%)
Query: 187 SYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDM 246
SYN+V+ + K A +L M KG +P V ++ V+ C E+D L+ M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 247 TKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRI 306
+ G PNS +Y ++I L + +++EA EMI G D + +I G CK I
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 307 HEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKI----PSANVVLLNTV 362
A+K M R TPD +TY ++ G C+ G + EA L +++ + V +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 363 INGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKG 422
INGY +G +A + ++ M+ GC P+V T+ LI GLCK+ SA EL++ M G
Sbjct: 428 INGYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 423 CEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------GDRIEEAL 470
+PNI TY +V+G CK G +E+A ++ E A GL+ +T +++A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 471 GLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKAL 530
+ ++ML +G+ VT+N L++ F G L + KL+N ML +G + T+N L+K
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 531 CNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDI 590
C + ++++M +G+ P + L+ G C+ R A ++M +G + +
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 591 VTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFK 637
TY+ LI G K EA +FD+++ EG+ D ++ +K
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 25/312 (8%)
Query: 370 GRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQ-RRFGSALELVNAMAVKGCEPNIV 428
G EA+ +F + ML+ G + V + N+ + L K + +A+ + G N+
Sbjct: 189 GLLREARRVF-EKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 429 TYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTY 488
+Y I++ C+ G RI+EA L M L+G T + ++Y
Sbjct: 248 SYNIVIHFVCQLG-----------------------RIKEAHHLLLLMELKGYTPDVISY 284
Query: 489 NTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMR 548
+T+++ + R G L + KL+ M +G + Y +I LC + + F EM+R
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 549 KGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQE 608
+GI P ++ LI+G C+ A +F +M R +TPD++TY ++I+G C++G + E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 609 ALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVR 668
A LF ++ +G+ PD+VT+ LI+ + K G DAF + + + G PN T+ L+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 669 NLVKEINMESWN 680
L KE +++S N
Sbjct: 465 GLCKEGDLDSAN 476
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 234/446 (52%), Gaps = 28/446 (6%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ ++ +L + + V L+ M GI + T +++ C +++ A S
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V + +L++ + +RV +AL + ++M+ MG +V +N +I GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVL 358
++ A L++RM G PD +TY L+ GLC +GR +A +++ + +V
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
N +I+ V GR EA+ FY+ M+ PD+ T+++LI+GLC R A E+ M
Sbjct: 259 FNALIDACVKEGRVSEAEE-FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
KGC P++VTY+IL++G+CK ++E + L+ +M
Sbjct: 318 VSKGCFPDVVTYSILINGYCKS-----------------------KKVEHGMKLFCEMSQ 354
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
GV NTVTY LI + R G L+ A ++ M+F G + ITYN L+ LC+ G ++K
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
L + +M + G+ ++ NI+I G+C+ + A + + +GL PDI TY +++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPD 624
GL K G +EA LF K++ +GI P+
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPN 500
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 237/459 (51%), Gaps = 28/459 (6%)
Query: 206 NLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHAL 265
+LF+ M+ P++ F ++ A+ + + D L M G N L++
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 266 SKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDD 325
+ +++S AL L +MI +G + TF +++G C+ +R+++A + D+M+ G+ P+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 326 ITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYD 381
+ Y ++ GLC++ +VD A LLN++ +VV N++I+G SGR+ +A +
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV-S 245
Query: 382 SMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEG 441
M PDVFTFN LI K+ R A E M + +P+IVTY++L+ G C
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 442 QLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSL 501
+L++A EE G M+ +G + VTY+ LI+ + + +
Sbjct: 306 RLDEA--------------------EEMFGF---MVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 502 HEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNIL 561
KL +M RG + +TY LI+ C AG ++ +F M+ G+ P+ I+ N+L
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 562 INGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGI 621
++GLC K AL L DM G+ DIVTYN +I G+CK G + +A +++ L +G+
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 622 YPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPND 660
PD TY T++ +K+GL +A + K +G +PN+
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 227/443 (51%), Gaps = 28/443 (6%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
++D + L M + +P+ + L+ A+SK + + L E+M ++G ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP-- 352
+++ C+ +++ A + +M+ G P +T+G L++G CR RV +A + +++
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 353 --SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
NVV+ NT+I+G S + D A + + M G PDV T+N LI GLC R+
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLL-NRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEAL 470
A +V+ M + P++ T+ L+D KEG R+ EA
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEG-----------------------RVSEAE 276
Query: 471 GLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKAL 530
Y++M+ + + VTY+ LI+ L EA ++ M+ +GC D +TY+ LI
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 531 CNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDI 590
C + V+ G+ LF EM ++G+ ++++ ILI G CR K N A E R M+ G+ P+I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 591 VTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHK 650
+TYN L++GLC G I++AL + +Q G+ D VTYN +I K G DA+ I
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 651 GVANGFVPNDATWYILVRNLVKE 673
G +P+ T+ ++ L K+
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKK 479
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 180/387 (46%), Gaps = 44/387 (11%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G +P+ ++ +L+ G+ A +F M+ G P V + ++ LC +VD+A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
LL M K G P+ V Y +LI L S R S+A ++ M DV TFN +I
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVLL 359
K R+ EA + + M+ R PD +TY +L++GLC R+DEA +
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF----------- 314
Query: 360 NTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMA 419
G+++S GC PDV T++ILI+G CK ++ ++L M+
Sbjct: 315 -----GFMVSK----------------GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 420 VKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------GDRIE 467
+G N VTYTIL+ G+C+ G+L A I M+ G+ N +IE
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 468 EALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLI 527
+AL + DM G+ A+ VTYN +I + G + +A + + +G D TY ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 528 KALCNAGAVDKGLGLFEEMMRKGIKPS 554
L G + LF +M GI P+
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN 500
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 10/324 (3%)
Query: 109 GYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQA 168
GY +Y +ID L +K+ +L +M+++GI + ++ G A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 169 TRLL--LDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVV 226
TR++ + + +Y P ++N ++D V A + +M+ + + P + T+ ++
Sbjct: 241 TRMVSCMTKREIY---PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 227 MKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGC 286
+ LCM + +D A + M GC P+ V Y LI+ KS +V + L EM G
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 287 TSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARA 346
+ T+ +I G C+ +++ A ++ RM+ G P+ ITY VL+HGLC G++++A
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 347 LLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGL 402
+L + A++V N +I G +G +A I Y S+ G +PD++T+ ++ GL
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI-YCSLNCQGLMPDIWTYTTMMLGL 476
Query: 403 CKQRRFGSALELVNAMAVKGCEPN 426
K+ A L M G PN
Sbjct: 477 YKKGLRREADALFRKMKEDGILPN 500
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 190 VVLDVLVAGNCH----KVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRD 245
V +L+ G C VA +F M+ G+ P + T+ V++ LC +++ A +L D
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 246 MTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNR 305
M K+G + V Y +I + K+ V++A + + G D+ T+ ++ GL K
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 306 IHEAAKLVDRMLVRGFTPDD 325
EA L +M G P++
Sbjct: 482 RREADALFRKMKEDGILPNE 501
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%)
Query: 536 VDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNS 595
+D L LF M++ PS + L++ + + +K + + M G+ ++ T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 596 LINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANG 655
L+N C+ + AL+ K+ G P VT+ +L++ + DA + + V G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 656 FVPNDATWYILVRNLVKEINMES 678
+ PN + ++ L K +++
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDN 204
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 239 bits (609), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 236/458 (51%), Gaps = 28/458 (6%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ + VL V+ N + L++ M + GIS +Y+F +++ C + + A +L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
L M K G P+ V +L++ + NR EA+ L++ M G +V +N VI+GLCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGR-VDEARALLNKIP---SANVVL 358
++ A ++ M +G D +TY L+ GL +GR D AR L + + NV+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
+I+ +V G EA+ + Y M+ +P+VFT+N LI+G C G A + + M
Sbjct: 257 FTALIDTFVKEGNLLEARNL-YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
KGC P++VTY L+ GFCK R+E+ + L+ +M
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKS-----------------------KRVEDGMKLFCEMTY 352
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
+G+ + TYNTLIH + + G L+ A K+ N M+ G D +TYN L+ LCN G ++K
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
L + E++ + + I+ NI+I GLCRT K A R + +G+ PD + Y ++I+
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHF 636
GLC+ G +EA L +++ +G P Y+ + H+
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 239/459 (52%), Gaps = 17/459 (3%)
Query: 235 EVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFN 294
+ D A SL +M + +P+ V + ++ ++K N+ + L +M +G + D+ +F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 295 DVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS- 353
+IH C+ +R+ A L+ +M+ GF P +T G L++G C+ R EA +L++ +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 354 ---ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGS 410
NVV+ NTVING + + A +FY M G D T+N LI GL R+
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFY-CMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 411 ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL--------SLNT 462
A L+ M + +PN++ +T L+D F KEG L +A + EM+ + + SL
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 463 GDRIEEALG----LYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
G I LG ++ M+ +G + VTYNTLI F + + + KL +M ++G
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
D TYN LI C AG ++ +F M+ G+ P ++ NIL++ LC K AL +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
D+ + DI+TYN +I GLC+ ++EA LF L +G+ PDA+ Y T+IS ++
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINME 677
GL +A + + +GF+P++ + +R+ ++ E
Sbjct: 478 GLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 172/379 (45%), Gaps = 28/379 (7%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G +P+ + +L+ GN + A +L M G P V + V+ LC ++++A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
+ M K G ++V Y TLI LS S R ++A LL +M+ +V F +I
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPS----AN 355
K + EA L M+ R P+ TY L++G C G + +A+ + + + S +
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 356 VVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELV 415
VV NT+I G+ S R ++ +F + M G + D FT+N LIHG C+ + A ++
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCE-MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 416 NAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQD 475
N M G P+IVTY IL+D C G++EKA +++ +D
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV-----------------------ED 419
Query: 476 MLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGA 535
+ + + +TYN +I R L EA L + +G D I Y +I LC G
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 536 VDKGLGLFEEMMRKGIKPS 554
+ L M G PS
Sbjct: 480 QREADKLCRRMKEDGFMPS 498
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 33/350 (9%)
Query: 109 GYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQA 168
G+ +Y +I+ L N++ V M+++GI + ++ G A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 169 TRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMK 228
RLL DM P + ++D V A NL+ +M+ + + P V+T+ ++
Sbjct: 239 ARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 229 ALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTS 288
C+ + A + M GC P+ V Y TLI KS RV + + L EM G
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 289 DVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALL 348
D T+N +IHG C+ +++ A K+ +RM+ G +PD +TY +L+ LC G++++A ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 349 NKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRF 408
+ + + + D+ T+NI+I GLC+ +
Sbjct: 418 EDLQKSEMDV--------------------------------DIITYNIIIQGLCRTDKL 445
Query: 409 GSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL 458
A L ++ KG +P+ + Y ++ G C++G +A+ + M G
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 252/509 (49%), Gaps = 18/509 (3%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G P+ R+ N+VL VL A ++ M+ GI PTV TF ++ + +++
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
+ +M + + V Y LI+ SK+ ++ EA +M G +FN +I G
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG 317
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVLL 359
CK +A + D ML G P TY + + LC GR+D+AR LL+ + + +VV
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSY 377
Query: 360 NTVINGYVISGRFDEAKAIFYDSMLSVGCI-PDVFTFNILIHGLCKQRRFGSALELVNAM 418
NT+++GY+ G+F EA +F D L G I P + T+N LI GLC+ A L M
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDD--LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL-------------SLNTGDR 465
+ P+++TYT LV GF K G L A + +EML KG+ L GD
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 466 IEEALGLYQDMLLEGVTANTVT-YNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYN 524
++A L+++M+ A +T YN I + G+L +A + + G D +TY
Sbjct: 496 -DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYT 554
Query: 525 GLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHR 584
+I+ G L++EM+RK + PS I+ +LI G + + A ++ +M R
Sbjct: 555 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 585 GLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDA 644
G+ P+++T+N+L+ G+CK G I EA K++ EGI P+ +Y LIS + +++
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 645 FLILHKGVANGFVPNDATWYILVRNLVKE 673
+ + + P+ T L ++L K+
Sbjct: 675 VKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 219/476 (46%), Gaps = 33/476 (6%)
Query: 208 FYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSK 267
F M+ KG P+V +V+K L ++ A ++ M +HG +P + + T++ + K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 268 SNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDIT 327
+ + + EM T+N +I+G K ++ EA + M GF +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 328 YGVLMHGLCRTGRVDEARALLNKIPSANVVLLNTVINGYVIS----GRFDEAKAIFYDSM 383
+ L+ G C+ G D+A + +++ +A + + N Y+ + GR D+A+ +
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR-----EL 365
Query: 384 LSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQL 443
LS PDV ++N L+HG K +F A L + + P+IVTY L+DG C+ G L
Sbjct: 366 LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 444 EKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHE 503
E A L ++M + + + +TY TL+ F++ G+L
Sbjct: 426 EGAQ-----------------------RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 504 AHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISC-NILI 562
A ++ ++ML +G D Y G DK L EEM+ ++ N+ I
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 563 NGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIY 622
+GLC+ A+EF R + GL PD VTY ++I G + G + A NL+D++ + +Y
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 623 PDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES 678
P +TY LI H K G + AF + G PN T L+ + K N++
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 222/500 (44%), Gaps = 32/500 (6%)
Query: 107 QEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPG 166
+ G T + ++D + + +D + L+MK I E + +++ + + G
Sbjct: 231 EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKME 290
Query: 167 QATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVV 226
+A R DM+ G T S+N +++ A + +ML+ GI PT T+ +
Sbjct: 291 EARRFHGDMRRS-GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIY 349
Query: 227 MKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGC 286
+ ALC +D A LL M P+ V Y TL+H K + EA +L +++
Sbjct: 350 ICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 405
Query: 287 TSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEAR- 345
+ T+N +I GLC+ + A +L + M + PD ITY L+ G + G + A
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 346 ---ALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGL 402
+L K + T G + G D+A + + + + PD+ +N+ I GL
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 403 CKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT 462
CK A+E + G P+ VTYT ++ G+ + GQ + A
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR--------------- 570
Query: 463 GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEIT 522
LY +ML + + + +TY LI+ + G L +A + +M RG + +T
Sbjct: 571 --------NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 523 YNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMI 582
+N L+ +C AG +D+ +M +GI P+ S +LI+ C K ++ ++M+
Sbjct: 623 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEML 682
Query: 583 HRGLTPDIVTYNSLINGLCK 602
+ + PD T+ +L L K
Sbjct: 683 DKEIEPDGYTHRALFKHLEK 702
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 84 LCKLLRLPLDVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEE 143
LCK+ L ++ +IF + G Y +I N +FK+ ++ +M +
Sbjct: 525 LCKVGNLVKAIEFQRKIF-----RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 144 GIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVL-DVLVAGNCHK 202
+ + +++ + + G QA + +MK G +P ++N +L + AGN +
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK-RGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 203 VAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLI 262
A M +GI P Y++ +++ C + + L ++M P+ ++ L
Sbjct: 639 -AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Query: 263 HALSKSNRVSEALMLLEEMIL 283
L K + S + LE ++L
Sbjct: 698 KHLEKDHE-SREVEFLERLLL 717
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 233/445 (52%), Gaps = 31/445 (6%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ ++ VL + + + +LF+ M GI +Y++ +V+ LC + A S+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
+ M K G P+ V +LI+ + NRV +A+ L+ +M MG DV +N +I G CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA----RALLNKIPSANVVL 358
+ +++A +L DRM G D +TY L+ GLC +GR +A R ++ + NV+
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 359 LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAM 418
VI+ +V G+F EA + Y+ M PDVFT+N LI+GLC R A ++++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKL-YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 419 AVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLL 478
KGC P++VTY L++GFCK R++E L+++M
Sbjct: 306 VTKGCLPDVVTYNTLINGFCK-----------------------SKRVDEGTKLFREMAQ 342
Query: 479 EGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDK 538
G+ +T+TYNT+I + + G A ++ + M R + TY+ L+ LC V+K
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEK 399
Query: 539 GLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLIN 598
L LFE M + I+ + NI+I+G+C+ A + R + +GL PD+V+Y ++I+
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 599 GLCKMGCIQEALNLFDKLQAEGIYP 623
G C+ ++ L+ K+Q +G+ P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 227/457 (49%), Gaps = 31/457 (6%)
Query: 206 NLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHAL 265
+LF M+ P++ F V+ + D SL M G + Y +I+ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 266 SKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDD 325
+ +R AL ++ +M+ G DV T + +I+G C+ NR+ +A LV +M GF PD
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 326 ITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYD 381
+ Y ++ G C+ G V++A L +++ A+ V N+++ G SGR+ +A + D
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 382 SMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEG 441
M+ +P+V TF +I K+ +F A++L M + +P++ TY L++G C G
Sbjct: 235 -MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 442 QLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSL 501
R++EA + M+ +G + VTYNTLI+ F + +
Sbjct: 294 -----------------------RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 502 HEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNIL 561
E KL +M RG D ITYN +I+ AG D +F M +P+ + +IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 387
Query: 562 INGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGI 621
+ GLC + AL +M + DI TYN +I+G+CK+G +++A +LF L +G+
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 622 YPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVP 658
PD V+Y T+IS ++ +D + L+ K +G +P
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 178/344 (51%), Gaps = 18/344 (5%)
Query: 347 LLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQR 406
++ P ++V + V++ S +D ++F+ M G D++++NI+I+ LC+
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFH-HMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 407 RFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL-------- 458
RF AL +V M G EP++VT + L++GFC+ ++ A ++++M G
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 459 -----SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLF 513
S G + +A+ L+ M +GV A+ VTYN+L+ G +A +L+ DM+
Sbjct: 179 TIIDGSCKIG-LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 514 RGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANT 573
R + IT+ +I G + + L+EEM R+ + P + N LINGLC + +
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 574 ALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLIS 633
A + L M+ +G PD+VTYN+LING CK + E LF ++ G+ D +TYNT+I
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 634 WHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINME 677
+F+ G D A I + + PN T+ IL+ L +E
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 398
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 184/389 (47%), Gaps = 44/389 (11%)
Query: 109 GYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQA 168
G H Y ++I+ L F + SV+ +M + G ++ + +G A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 169 TRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCH----KVAPNLFYDMLSKGISPTVYTFG 224
L+ M+ + G +P YN ++D G+C A LF M G+ T+
Sbjct: 159 IDLVSKMEEM-GFRPDVVIYNTIID----GSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
Query: 225 VVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILM 284
++ LC A L+RDM VPN + + +I K + SEA+ L EEM
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Query: 285 GCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA 344
DV T+N +I+GLC R+ EA +++D M+ +G PD +TY L++G C++ RVDE
Sbjct: 274 CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 345 RALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIF-----------YDSMLSVGCI 389
L ++ + + NT+I GY +GR D A+ IF Y +L C+
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM 393
Query: 390 P--------------------DVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVT 429
D+ T+NI+IHG+CK A +L +++ KG +P++V+
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 430 YTILVDGFCKEGQLEKANIIINEMLAKGL 458
YT ++ GFC++ Q +K++++ +M GL
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)
Query: 443 LEKANIIINEMLAK--GLSLNTGD---RIEEALGLYQDMLLEGVTANTVTYNTLIHAFLR 497
L+K N +I +++ G + +T +EE + L+ M+ + V ++ ++ +
Sbjct: 22 LQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAK 81
Query: 498 RGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSIS 557
+ L + M G D +YN +I LC L + +MM+ G +P ++
Sbjct: 82 SKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVT 141
Query: 558 CNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQ 617
+ LING C+ + A++ + M G PD+V YN++I+G CK+G + +A+ LFD+++
Sbjct: 142 VSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
Query: 618 AEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
+G+ DAVTYN+L++ G + DA ++ V VPN T+ ++ VKE
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 257/529 (48%), Gaps = 21/529 (3%)
Query: 167 QATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVV 226
+A ++ M++ GC YNV++D L A + D+ K + P V T+ +
Sbjct: 245 RAKEMIAHMEAT-GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 227 MKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGC 286
+ LC V E + ++ +M P+ +L+ L K ++ EAL L++ ++ G
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 287 TSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARA 346
+ ++ +N +I LCK + HEA L DRM G P+D+TY +L+ CR G++D A +
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 347 LLNKIPSANVVL----LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGL 402
L ++ + L N++ING+ G A+ F M++ P V T+ L+ G
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG-FMAEMINKKLEPTVVTYTSLMGGY 482
Query: 403 CKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLN- 461
C + + AL L + M KG P+I T+T L+ G + G + A + NEM + N
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 462 ------------TGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVN 509
GD + +A ++M +G+ +T +Y LIH G EA V+
Sbjct: 543 VTYNVMIEGYCEEGD-MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 510 DMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTR 569
+ C L+EI Y GL+ C G +++ L + +EM+++G+ + +LI+G + +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 570 KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYN 629
L++M RGL PD V Y S+I+ K G +EA ++D + EG P+ VTY
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 630 TLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK-EINME 677
+I+ K G ++A ++ K VPN T+ + L K E++M+
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 254/536 (47%), Gaps = 54/536 (10%)
Query: 179 YGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDS 238
+G P YN ++D L G A LF M G+ P T+ +++ C ++D+
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 239 ACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIH 298
A S L +M G + Y +LI+ K +S A + EMI V T+ ++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 299 GLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANV-- 356
G C +I++A +L M +G P T+ L+ GL R G + +A L N++ NV
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 357 --VLLNTVINGYVISGRFDEAKAI-FYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALE 413
V N +I GY G D +KA F M G +PD +++ LIHGLC + A
Sbjct: 541 NRVTYNVMIEGYCEEG--DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 414 LVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT---GDRIEEAL 470
V+ + CE N + YT L+ GFC+EG+LE+A + EM+ +G+ L+ G I+ +L
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 471 ---------GLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEI 521
GL ++M G+ + V Y ++I A + G EA + + M+ GC +E+
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 522 TYNGLIKALCNAGAVDKGLGLFEEM----------------------------------- 546
TY +I LC AG V++ L +M
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 547 MRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCI 606
+ KG+ ++ + N+LI G CR + A E + MI G++PD +TY ++IN LC+ +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 607 QEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDAT 662
++A+ L++ + +GI PD V YNTLI G A + ++ + G +PN+ T
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 210/430 (48%), Gaps = 18/430 (4%)
Query: 258 YQTLIHALSKSNRVSEALMLLEEMIL-MGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRM 316
+ LI +S RV + +++ + MI + +V+T + ++HGL K A +L + M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 317 LVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVLLNTVINGYVISGRF 372
+ G PD Y ++ LC + A+ ++ + + N+V N +I+G +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 373 DEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTI 432
EA I D + PDV T+ L++GLCK + F LE+++ M P+ +
Sbjct: 279 WEAVGIKKD-LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 433 LVDGFCKEGQLEKANIIINEMLAKGLSLN------------TGDRIEEALGLYQDMLLEG 480
LV+G K G++E+A ++ ++ G+S N G + EA L+ M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 481 VTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGL 540
+ N VTY+ LI F RRG L A + +M+ G L YN LI C G +
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 541 GLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGL 600
G EM+ K ++P+ ++ L+ G C K N AL +M +G+ P I T+ +L++GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 601 CKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPND 660
+ G I++A+ LF+++ + P+ VTYN +I + +EG AF L + G VP+
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 661 ATWYILVRNL 670
++ L+ L
Sbjct: 578 YSYRPLIHGL 587
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 1/191 (0%)
Query: 488 YNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEI-TYNGLIKALCNAGAVDKGLGLFEEM 546
++ LI ++R + + + M+ + L E+ T + L+ L + LF +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 547 MRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCI 606
+ GI+P +I LC + + A E + M G +IV YN LI+GLCK +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 607 QEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYIL 666
EA+ + L + + PD VTY TL+ K F+ ++ + + F P++A L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 667 VRNLVKEINME 677
V L K +E
Sbjct: 339 VEGLRKRGKIE 349
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 259/548 (47%), Gaps = 53/548 (9%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
G P+ + N++L LV N + F D++ KG+SP VY F + A C +V+ A
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
L M + G PN V + T+I L R EA M E+M+ G + T++ ++ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVL- 358
L + RI +A ++ M +GF P+ I Y L+ G +++A + + + S + L
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 359 ---LNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELV 415
NT+I GY +G+ D A+ + + MLS+G + +F +I LC F SAL V
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKE-MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 471
Query: 416 NAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNT------------G 463
M ++ P T L+ G CK G+ KA + + L KG ++T
Sbjct: 472 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 531
Query: 464 DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITY 523
+++EA + +++L G + V+YNTLI + L EA +++M+ RG D TY
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Query: 524 NGLIKAL-----------------------------------CNAGAVDKGLGLFEEMMR 548
+ LI L C A ++G F+EMM
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651
Query: 549 KGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQE 608
K ++P+++ N LI CR+ + + ALE DM H+G++P+ TY SLI G+ + ++E
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 711
Query: 609 ALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVR 668
A LF++++ EG+ P+ Y LI + K G +L + + PN T+ +++
Sbjct: 712 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 771
Query: 669 NLVKEINM 676
++ N+
Sbjct: 772 GYARDGNV 779
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 269/541 (49%), Gaps = 22/541 (4%)
Query: 151 LFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYD 210
LF + + +GG +A +L M+ G P ++N V+D L G C + +
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGL--GMCGRYDEAFMFK 331
Query: 211 --MLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKS 268
M+ +G+ PT+ T+ +++K L + A +L++MTK G PN +VY LI + ++
Sbjct: 332 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391
Query: 269 NRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITY 328
+++A+ + + M+ G + T+N +I G CK + A +L+ ML GF + ++
Sbjct: 392 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Query: 329 GVLMHGLCRTGRVDEARALLNKIPSANVV----LLNTVINGYVISGRFDEAKAIFYDSML 384
++ LC D A + ++ N+ LL T+I+G G+ +A +++ L
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ-FL 510
Query: 385 SVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLE 444
+ G + D T N L+HGLC+ + A + + +GC + V+Y L+ G C + +L+
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 445 KANIIINEMLAKGLS------------LNTGDRIEEALGLYQDMLLEGVTANTVTYNTLI 492
+A + ++EM+ +GL L +++EEA+ + D G+ + TY+ +I
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 493 HAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIK 552
+ E + ++M+ + + + YN LI+A C +G + L L E+M KGI
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 553 PSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNL 612
P+S + LI G+ + A +M GL P++ Y +LI+G K+G + + L
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 750
Query: 613 FDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
++ ++ ++P+ +TY +I + ++G +A +L++ G VP+ T+ + +K
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Query: 673 E 673
+
Sbjct: 811 Q 811
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 162/324 (50%), Gaps = 34/324 (10%)
Query: 349 NKIPSANVVLLNTVINGYV--ISGRFDEAKAIFYDSMLSVG-CIPDVFT---FNILIHGL 402
N + +A VVL+ +ING V + +++ D+M S+ C + ++LI
Sbjct: 153 NLLSAARVVLIR-LINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVY 211
Query: 403 CKQ-RRFGS--ALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS 459
C Q +R G AL++ +A KG P+ T IL+ + + +K
Sbjct: 212 CTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCC------------ 259
Query: 460 LNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLD 519
EA D++ +GV+ + + T I+AF + G + EA KL + M G +
Sbjct: 260 --------EAF----DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPN 307
Query: 520 EITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLR 579
+T+N +I L G D+ E+M+ +G++P+ I+ +IL+ GL R ++ A L+
Sbjct: 308 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 367
Query: 580 DMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEG 639
+M +G P+++ YN+LI+ + G + +A+ + D + ++G+ + TYNTLI + K G
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427
Query: 640 LFDDAFLILHKGVANGFVPNDATW 663
D+A +L + ++ GF N ++
Sbjct: 428 QADNAERLLKEMLSIGFNVNQGSF 451
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 225 bits (574), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 248/517 (47%), Gaps = 39/517 (7%)
Query: 163 GVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYT 222
G +A L DM +G +P +YN++ A + DML KG+SP V T
Sbjct: 313 GSIAEALELASDMNK-HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 371
Query: 223 FGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVY-QTLIHALSKSNRVSEALMLLEEM 281
+ +++ C + +D LL+DM G NS++ ++ L K+ R+ EAL L +M
Sbjct: 372 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 431
Query: 282 ILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRV 341
G + D+ ++ VIHGLCK+ + A L D M + P+ T+G L+ GLC+ G +
Sbjct: 432 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 491
Query: 342 DEARALLNKIPSA----NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNI 397
EAR+LL+ + S+ ++VL N VI+GY SG +EA +F ++ G P V TFN
Sbjct: 492 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF-KVVIETGITPSVATFNS 550
Query: 398 LIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG 457
LI+G CK + A ++++ + + G P++V+YT L+D + G + + + EM A+G
Sbjct: 551 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 610
Query: 458 L------------SLNTG-----------DRIEEAL--GLYQDMLLEGVTANTVTYNTLI 492
+ L G +RI E GL +DM EG+ + +TYNT+I
Sbjct: 611 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL-RDMESEGIPPDQITYNTII 669
Query: 493 HAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIK 552
R L A + M R TYN LI +LC G + K + + +
Sbjct: 670 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 729
Query: 553 PSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNL 612
S + LI C A++ ++HRG I Y+++IN LC+ + E+
Sbjct: 730 LSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFF 789
Query: 613 FDKLQAEGIYPD------AVTYNTLISWHFKEGLFDD 643
F + ++GI PD + + L+SW K GL D
Sbjct: 790 FCLMLSQGISPDLDICEVMIKSDELLSWTIKWGLLPD 826
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 239/503 (47%), Gaps = 30/503 (5%)
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P+ S+N ++ +A + F +L G+ P+VY+ +++ LC+V + A L
Sbjct: 262 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 321
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCK 302
DM KHG P+SV Y L +S A ++ +M+ G + DV T+ ++ G C+
Sbjct: 322 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 381
Query: 303 VNRIHEAAKLVDRMLVRGFTPDDITY-GVLMHGLCRTGRVDEARALLNKIP----SANVV 357
+ I L+ ML RGF + I V++ GLC+TGR+DEA +L N++ S ++V
Sbjct: 382 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441
Query: 358 LLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNA 417
+ VI+G G+FD A + YD M +P+ T L+ GLC++ A L+++
Sbjct: 442 AYSIVIHGLCKLGKFDMALWL-YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 500
Query: 418 MAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTG------------DR 465
+ G +IV Y I++DG+ K G +E+A + ++ G++ +
Sbjct: 501 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 560
Query: 466 IEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNG 525
I EA + + L G+ + V+Y TL+ A+ G+ +L +M G P +TY+
Sbjct: 561 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 620
Query: 526 LIKALCNAGA------------VDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANT 573
+ K LC +K +M +GI P I+ N +I LCR + +
Sbjct: 621 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 680
Query: 574 ALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLIS 633
A FL M R L TYN LI+ LC G I++A + LQ + + Y TLI
Sbjct: 681 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 740
Query: 634 WHFKEGLFDDAFLILHKGVANGF 656
H +G + A + H+ + GF
Sbjct: 741 AHCVKGDPEMAVKLFHQLLHRGF 763
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 231/448 (51%), Gaps = 30/448 (6%)
Query: 214 KGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSE 273
K I P+V +F +M C + VD A S + K G VP+ + LI+ L ++E
Sbjct: 258 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 317
Query: 274 ALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMH 333
AL L +M G D T+N + G + I A +++ ML +G +PD ITY +L+
Sbjct: 318 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 377
Query: 334 GLCRTGRVDEARALLNKIPSA-----NVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGC 388
G C+ G +D LL + S +++ + +++G +GR DEA ++F + M + G
Sbjct: 378 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF-NQMKADGL 436
Query: 389 IPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANI 448
PD+ ++I+IHGLCK +F AL L + M K PN T+ L+ G C++G L +A
Sbjct: 437 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 496
Query: 449 IINEMLAKGLSLN------------TGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFL 496
+++ +++ G +L+ IEEAL L++ ++ G+T + T+N+LI+ +
Sbjct: 497 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 556
Query: 497 RRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSI 556
+ ++ EA K+++ + G ++Y L+ A N G L EM +GI P+++
Sbjct: 557 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 616
Query: 557 SCNILINGLCRTRK---ANTAL---------EFLRDMIHRGLTPDIVTYNSLINGLCKMG 604
+ +++ GLCR K N L + LRDM G+ PD +TYN++I LC++
Sbjct: 617 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 676
Query: 605 CIQEALNLFDKLQAEGIYPDAVTYNTLI 632
+ A + +++ + + TYN LI
Sbjct: 677 HLSGAFVFLEIMKSRNLDASSATYNILI 704
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 221/453 (48%), Gaps = 26/453 (5%)
Query: 232 MVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQ 291
++ E + C LL + + +V+ L+ S+ V ++L +L++M Q
Sbjct: 144 LLQEEGTLCELLSNSFRKW-ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQ 202
Query: 292 TFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLN-- 349
++N V++ + +++ + K + ++ TY ++ GLCR ++++A L
Sbjct: 203 SYNSVLYHFRETDKMWDVYKEIK-------DKNEHTYSTVVDGLCRQQKLEDAVLFLRTS 255
Query: 350 --KIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRR 407
K +VV N++++GY G D AK+ F+ ++L G +P V++ NILI+GLC
Sbjct: 256 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKS-FFCTVLKCGLVPSVYSHNILINGLCLVGS 314
Query: 408 FGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS-------- 459
ALEL + M G EP+ VTY IL GF G + A +I +ML KGLS
Sbjct: 315 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 374
Query: 460 LNTGD----RIEEALGLYQDMLLEGVTANTVTY-NTLIHAFLRRGSLHEAHKLVNDMLFR 514
L G I+ L L +DML G N++ + ++ + G + EA L N M
Sbjct: 375 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 434
Query: 515 GCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTA 574
G D + Y+ +I LC G D L L++EM K I P+S + L+ GLC+ A
Sbjct: 435 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 494
Query: 575 LEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISW 634
L +I G T DIV YN +I+G K GCI+EAL LF + GI P T+N+LI
Sbjct: 495 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 554
Query: 635 HFKEGLFDDAFLILHKGVANGFVPNDATWYILV 667
+ K +A IL G P+ ++ L+
Sbjct: 555 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 587
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/579 (25%), Positives = 254/579 (43%), Gaps = 62/579 (10%)
Query: 124 LGANKEFKVIDSVLLQM-KEEGIICRESLFILIMKYYGRGGVPGQ----ATRLLLDMKSV 178
L + FK + +L Q+ +EEG +C E L K+ G V ++RL + S+
Sbjct: 128 LAGQRRFKELQVILEQLLQEEGTLC-ELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSL 186
Query: 179 Y--------GCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKAL 230
Y + +SYN VL H + +D+ + +T+ V+ L
Sbjct: 187 YILKKMKDQNLNVSTQSYNSVL-------YHFRETDKMWDVYKEIKDKNEHTYSTVVDGL 239
Query: 231 CMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDV 290
C +++ A LR P+ V + +++ K V A ++ G V
Sbjct: 240 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 299
Query: 291 QTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEA----RA 346
+ N +I+GLC V I EA +L M G PD +TY +L G G + A R
Sbjct: 300 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 359
Query: 347 LLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGC-IPDVFTFNILIHGLCKQ 405
+L+K S +V+ ++ G G D + D MLS G + + ++++ GLCK
Sbjct: 360 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD-MLSRGFELNSIIPCSVMLSGLCKT 418
Query: 406 RRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDR 465
R AL L N M G P++V Y+I++ G CK G+ + A
Sbjct: 419 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA------------------- 459
Query: 466 IEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNG 525
L LY +M + + N+ T+ L+ ++G L EA L++ ++ G LD + YN
Sbjct: 460 ----LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 515
Query: 526 LIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRG 585
+I +G +++ L LF+ ++ GI PS + N LI G C+T+ A + L + G
Sbjct: 516 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 575
Query: 586 LTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLIS-----WH----- 635
L P +V+Y +L++ G + L +++AEGI P VTY+ + W
Sbjct: 576 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 635
Query: 636 --FKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
+E +F+ L + G P+ T+ +++ L +
Sbjct: 636 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 674
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 117 YYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGG------------V 164
Y L+D K ID + +MK EGI + +I K RG +
Sbjct: 583 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 642
Query: 165 PGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDML-SKGISPTVYTF 223
+ + L DM+S G P +YN ++ L H +F +++ S+ + + T+
Sbjct: 643 FEKCKQGLRDMES-EGIPPDQITYNTIIQYLCRVK-HLSGAFVFLEIMKSRNLDASSATY 700
Query: 224 GVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMIL 283
+++ +LC+ + A S + + + + Y TLI A A+ L +++
Sbjct: 701 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 760
Query: 284 MGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPD 324
G ++ ++ VI+ LC+ + ++E+ ML +G +PD
Sbjct: 761 RGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 263/557 (47%), Gaps = 56/557 (10%)
Query: 168 ATRLLLDMKSVYGCQPTFRSY-NVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVV 226
A LL +MK C P+ +Y +V+L + GN A L +MLS GIS V +
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD-AIRLKDEMLSDGISMNVVAATSL 345
Query: 227 MKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGC 286
+ C N++ SA L M K G PNSV + LI K+ + +AL ++M ++G
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 287 TSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARA 346
T V + +I G K + EA KL D G + ++ LC+ G+ DEA
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATE 464
Query: 347 LLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGL 402
LL+K+ S NVV N V+ G+ D A+ +F ++L G P+ +T++ILI G
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF-SNILEKGLKPNNYTYSILIDGC 523
Query: 403 CKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG----- 457
+ +ALE+VN M E N V Y +++G CK GQ KA ++ M+ +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 458 -LSLNT-------GDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVN 509
+S N+ ++ A+ Y++M G++ N +TY +L++ + + +A ++ +
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 510 DMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTR 569
+M +G LD Y LI C ++ LF E++ +G+ PS N LI+G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 570 KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAV--- 626
AL+ + M+ GL D+ TY +LI+GL K G + A L+ ++QA G+ PD +
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 627 --------------------------------TYNTLISWHFKEGLFDDAFLILHKGVAN 654
YN +I+ H++EG D+AF + + +
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 655 GFVPNDATWYILVRNLV 671
G +P+ AT+ ILV V
Sbjct: 824 GILPDGATFDILVSGQV 840
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 226/485 (46%), Gaps = 24/485 (4%)
Query: 213 SKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVS 272
S G F ++ A + D A ++ M + +P + AL + N ++
Sbjct: 156 SFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLT 215
Query: 273 EALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLM 332
EA L M+ +G D T ++ + + EA +++ R + RG PD + Y + +
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAV 275
Query: 333 HGLCRTGRVDEARALLNK-------IPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLS 385
C+T + A +LL + +PS +VI V G D+A + D MLS
Sbjct: 276 QACCKTLDLAMANSLLREMKEKKLCVPSQET--YTSVILASVKQGNMDDAIRL-KDEMLS 332
Query: 386 VGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEK 445
G +V LI G CK SAL L + M +G PN VT+++L++ F K G++EK
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 446 ANIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVTYNTLIH 493
A +M GL+ + G + EEAL L+ + G+ AN NT++
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILS 451
Query: 494 AFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKP 553
++G EA +L++ M RG + ++YN ++ C +D +F ++ KG+KP
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 554 SSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLF 613
++ + +ILI+G R ALE + M + + V Y ++INGLCK+G +A L
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 614 -DKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVK 672
+ ++ + + ++YN++I FKEG D A + NG PN T+ L+ L K
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 673 EINME 677
M+
Sbjct: 632 NNRMD 636
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 154/574 (26%), Positives = 262/574 (45%), Gaps = 18/574 (3%)
Query: 93 DVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLF 152
D D+S F HT + +++ L + + + + V M++ I + +
Sbjct: 97 DTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTY 156
Query: 153 ILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDML 212
+ I K G QA L M+ +G SYN ++ +L+ A ++ M+
Sbjct: 157 LTIFKSLSVKGGLKQAPYALRKMRE-FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 213 SKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVS 272
+G P++ T+ +M L ++DS LL++M G PN + I L ++ +++
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 273 EALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLM 332
EA +L+ M GC DV T+ +I LC ++ A ++ ++M PD +TY L+
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 333 HGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGC 388
+D + +++ +VV +++ +G F EA D M G
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL-DVMRDQGI 394
Query: 389 IPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANI 448
+P++ T+N LI GL + R ALEL M G +P TY + +D + K G A
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 449 IINEMLAKGL------------SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFL 496
+M KG+ SL R EA ++ + G+ ++VTYN ++ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 497 RRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSI 556
+ G + EA KL+++M+ GC D I N LI L A VD+ +F M +KP+ +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 557 SCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKL 616
+ N L+ GL + K A+E M+ +G P+ +T+N+L + LCK + AL + K+
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 617 QAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHK 650
G PD TYNT+I K G +A H+
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 252/553 (45%), Gaps = 59/553 (10%)
Query: 167 QATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVV 226
+A ++ + MK + +PT +YN +L L + A LF M+ KG P TF +
Sbjct: 556 EAWKMFMRMKEM-KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 227 MKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGC 286
LC +EV A +L M GCVP+ Y T+I L K+ +V EA+ +M +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 287 TSDVQTFNDVIHGLCKVNRIHEAAK--------------------LVDRMLVRGFTPDDI 326
D T ++ G+ K + I +A K L+ +L + +
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 327 TYG--VLMHGLCRTG---------------RVDEARALLNKIP-----SANVVLLNTVIN 364
++ ++ +G+CR G V AR L K + N +I
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 793
Query: 365 GYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCE 424
G + + + A+ +F + S GCIPDV T+N L+ K + EL M+ CE
Sbjct: 794 GLLEADMIEIAQDVFL-QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 425 PNIVTYTILVDGFCKEGQLEKA-NIIINEMLAKGLS------------LNTGDRIEEALG 471
N +T+ I++ G K G ++ A ++ + M + S L+ R+ EA
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 472 LYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALC 531
L++ ML G N YN LI+ F + G A L M+ G D TY+ L+ LC
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 532 NAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDM-IHRGLTPDI 590
G VD+GL F+E+ G+ P + N++INGL ++ + AL +M RG+TPD+
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 591 VTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHK 650
TYNSLI L G ++EA +++++Q G+ P+ T+N LI + G + A+ +
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 651 GVANGFVPNDATW 663
V GF PN T+
Sbjct: 1093 MVTGGFSPNTGTY 1105
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/602 (26%), Positives = 281/602 (46%), Gaps = 62/602 (10%)
Query: 123 KLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQ 182
K G ++E K + +K+ G++ + ++MK Y + G +A +LL +M GC+
Sbjct: 480 KAGRDREAK---QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCE 535
Query: 183 PTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSL 242
P N +++ L + A +F M + PTV T+ ++ L ++ A L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 243 LRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIH---- 298
M + GC PN++ + TL L K++ V+ AL +L +M+ MGC DV T+N +I
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 299 ------------------------------GLCKVNRIHEAAKLVDRMLVR-GFTPDDIT 327
G+ K + I +A K++ L P ++
Sbjct: 656 NGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 328 YGVLMHGLCRTGRVDEA-----RALLNKIPSANVVLLNTVINGYVISGRFDEAKAIFYDS 382
+ L+ + +D A R + N I +L +I A+ +F
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 383 MLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQ 442
+G P + T+N+LI GL + A ++ + GC P++ TY L+D + K G+
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 443 LEK--------------ANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLE-GVTANTVT 487
+++ AN I + ++ GL + G+ +++AL LY D++ + + T
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGL-VKAGN-VDDALDLYYDLMSDRDFSPTACT 893
Query: 488 YNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMM 547
Y LI + G L+EA +L ML GC + YN LI AG D LF+ M+
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 548 RKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQ 607
++G++P + ++L++ LC + + L + +++ GL PD+V YN +INGL K ++
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 608 EALNLFDKLQ-AEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYIL 666
EAL LF++++ + GI PD TYN+LI G+ ++A I ++ G PN T+ L
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 667 VR 668
+R
Sbjct: 1074 IR 1075
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 235/503 (46%), Gaps = 19/503 (3%)
Query: 187 SYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDM 246
+Y + L K AP M G Y++ ++ L A + R M
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 247 TKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRI 306
G P+ Y +L+ L K + + LL+EM +G +V TF I L + +I
Sbjct: 215 ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI 274
Query: 307 HEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSA----NVVLLNTV 362
+EA +++ RM G PD +TY VL+ LC ++D A+ + K+ + + V T+
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 363 INGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKG 422
++ + + D K F+ M G +PDV TF IL+ LCK FG A + ++ M +G
Sbjct: 335 LDRFSDNRDLDSVKQ-FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 423 CEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLN-------------TGDRIEEA 469
PN+ TY L+ G + +L+ A + M + G+ +GD + A
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS-A 452
Query: 470 LGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKA 529
L ++ M +G+ N V N +++ + G EA ++ + G D +TYN ++K
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 530 LCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPD 589
G +D+ + L EMM G +P I N LIN L + + + A + M L P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 590 IVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILH 649
+VTYN+L+ GL K G IQEA+ LF+ + +G P+ +T+NTL K A +L
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 650 KGVANGFVPNDATWYILVRNLVK 672
K + G VP+ T+ ++ LVK
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVK 655
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 158/621 (25%), Positives = 275/621 (44%), Gaps = 90/621 (14%)
Query: 139 QMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAG 198
M+ G+ +I+ + YYG+ G A MK+ G P + N L L
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT-KGIAPNIVACNASLYSLAKA 481
Query: 199 NCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVV- 257
+ A +FY + G+ P T+ ++MK V E+D A LL +M ++GC P+ +V
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 258 ----------------------------------YQTLIHALSKSNRVSEALMLLEEMIL 283
Y TL+ L K+ ++ EA+ L E M+
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 284 MGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDE 343
GC + TFN + LCK + + A K++ +M+ G PD TY ++ GL + G+V E
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 344 ARAL---LNKIPSANVVLLNTVINGYVISGRFDEAKAI---------------FYD---- 381
A + K+ + V L T++ G V + ++A I F++
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG 721
Query: 382 SMLSVGCIPDVFTFN--ILIHGL---------------CKQRRFGSALELVNAMAVK-GC 423
S+L+ I + +F+ ++ +G+ CK A L G
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 424 EPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL------------SLNTGDRIEEALG 471
+P + TY +L+ G + +E A + ++ + G + +I+E
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 472 LYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLF-RGCPLDEITYNGLIKAL 530
LY++M ANT+T+N +I ++ G++ +A L D++ R TY LI L
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 531 CNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDI 590
+G + + LFE M+ G +P+ NILING + +A+ A + M+ G+ PD+
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 591 VTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHK 650
TY+ L++ LC +G + E L+ F +L+ G+ PD V YN +I+ K ++A ++ ++
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 651 -GVANGFVPNDATWYILVRNL 670
+ G P+ T+ L+ NL
Sbjct: 1022 MKTSRGITPDLYTYNSLILNL 1042
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%)
Query: 485 TVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFE 544
T T N ++ A G L E + + M R D TY + K+L G + +
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 545 EMMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMG 604
+M G ++ S N LI+ L ++R A+E R MI G P + TY+SL+ GL K
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 605 CIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWY 664
I + L +++ G+ P+ T+ I + G ++A+ IL + G P+ T+
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 665 ILVRNL 670
+L+ L
Sbjct: 298 VLIDAL 303
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 116 VYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLLLDM 175
+Y +LI+ G E ++ +M +EG+ + +++ G + ++
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 176 KSVYGCQPTFRSYNVVLDVLVAGNCHKV--APNLFYDM-LSKGISPTVYTFGVVMKALCM 232
K G P YN++++ L G H++ A LF +M S+GI+P +YT+ ++ L +
Sbjct: 988 KES-GLNPDVVCYNLIINGL--GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 233 VNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQT 292
V+ A + ++ + G PN + LI S S + A + + M+ G + + T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 293 FNDV 296
+ +
Sbjct: 1105 YEQL 1108
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 107 QEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPG 166
+EG Y VL+D L ++KE G+ + LI+ G+
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 167 QATRLLLDMKSVYGCQPTFRSYN-VVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGV 225
+A L +MK+ G P +YN ++L++ +AG + A ++ ++ G+ P V+TF
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE-AGKIYNEIQRAGLEPNVFTFNA 1072
Query: 226 VMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTL 261
+++ + + + A ++ + M G PN+ Y+ L
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 557 SCNILINGLCRTRKANTALEFLRDMIH-RGLTPDIVTYNSLINGLCKMGCIQEALNLFDK 615
+CN ++ L R + ++ D++ R + D TY ++ L G +++A K
Sbjct: 120 TCNYMLEAL-RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRK 178
Query: 616 LQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEIN 675
++ G +A +YN LI K +A + + + GF P+ T+ L+ L K +
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 676 MES 678
++S
Sbjct: 239 IDS 241
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 267/546 (48%), Gaps = 24/546 (4%)
Query: 149 ESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLV---AGNCHKVAP 205
++LF + + Y G P A ++ M + +P + N +L LV + A
Sbjct: 131 KALFDIALSAYLHEGKPHVALQIFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSFSISSAR 189
Query: 206 NLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCV-PNSVVYQTLIHA 264
+F DM+ G+S V TF V++ C+ +++ A +L M V P++V Y T++ A
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 265 LSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPD 324
+SK R+S+ LL +M G + T+N++++G CK+ + EA ++V+ M PD
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 325 DITYGVLMHGLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFY 380
TY +L++GLC G + E L++ + S +VV NT+I+G G EA+ +
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM- 368
Query: 381 DSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMA-VKGCEPNIVTYTILVDGFCK 439
+ M + G + T NI + LCK+ + + V + + G P+IVTY L+ + K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 440 EGQLEKANIIINEMLAKGLSLNT------------GDRIEEALGLYQDMLLEGVTANTVT 487
G L A ++ EM KG+ +NT +++EA L G + VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 488 YNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMM 547
Y TLI F R + +A ++ ++M T+N LI LC+ G + + F+E+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 548 RKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQ 607
G+ P + N +I G C+ + A EF + I PD T N L+NGLCK G +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 608 EALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILV 667
+ALN F+ L E D VTYNT+IS K+ +A+ +L + G P+ T+ +
Sbjct: 609 KALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 668 RNLVKE 673
L+++
Sbjct: 668 SLLMED 673
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 245/486 (50%), Gaps = 23/486 (4%)
Query: 218 PTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSK---SNRVSEA 274
P+ F + + A + A + + M + PN + TL+ L + S +S A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 275 LMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVR-GFTPDDITYGVLMH 333
+ ++M+ +G + +VQTFN +++G C ++ +A +++RM+ PD++TY ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 334 GLCRTGRVDEARALLNKIPS----ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCI 389
+ + GR+ + + LL + N V N ++ GY G EA I + M +
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-ELMKQTNVL 307
Query: 390 PDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANII 449
PD+ T+NILI+GLC LEL++AM +P++VTY L+DG + G +A +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 450 INEMLAKGLSLNT-----------GDRIEEALGLYQDMLLE--GVTANTVTYNTLIHAFL 496
+ +M G+ N + EA+ L++ G + + VTY+TLI A+L
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 497 RRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSI 556
+ G L A +++ +M +G ++ IT N ++ ALC +D+ L ++G +
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 557 SCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKL 616
+ LI G R K ALE +M +TP + T+NSLI GLC G + A+ FD+L
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 617 QAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE-IN 675
G+ PD T+N++I + KEG + AF ++ + + F P++ T IL+ L KE +
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 676 MESWNF 681
++ NF
Sbjct: 608 EKALNF 613
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 12/395 (3%)
Query: 116 VYYVLID---KLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVPGQATRLL 172
Y LID +LG + E + ++ QM+ +G+ + + +K+ + TR +
Sbjct: 347 TYNTLIDGCFELGLSLEAR---KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403
Query: 173 LDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCM 232
++ ++G P +Y+ ++ + A + +M KGI T ++ ALC
Sbjct: 404 KELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463
Query: 233 VNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQT 292
++D A +LL K G + + V Y TLI + +V +AL + +EM + T V T
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523
Query: 293 FNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIP 352
FN +I GLC + A + D + G PDD T+ ++ G C+ GRV++A N+
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 353 ----SANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRF 408
+ N ++NG G ++A F+++++ + D T+N +I CK ++
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKA-LNFFNTLIEEREV-DTVTYNTMISAFCKDKKL 641
Query: 409 GSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLNTGDRIEE 468
A +L++ M KG EP+ TY + ++G+L + + ++ + K S+ ++E
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVET 701
Query: 469 ALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHE 503
E + + Y+ +I RG L E
Sbjct: 702 EKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 490 TLIHAFLRR--GSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMM 547
+L+ +++R SL + L++ L P + ++ + A + G L +F++M+
Sbjct: 99 SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMI 158
Query: 548 RKGIKPSSISCNILINGLCRTRKA---NTALEFLRDMIHRGLTPDIVTYNSLINGLCKMG 604
R +KP+ ++CN L+ GL R + ++A E DM+ G++ ++ T+N L+NG C G
Sbjct: 159 RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEG 218
Query: 605 CIQEALNLFDKLQAE-GIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATW 663
+++AL + +++ +E + PD VTYNT++ K+G D +L NG VPN T+
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278
Query: 664 YILV 667
LV
Sbjct: 279 NNLV 282
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 246/513 (47%), Gaps = 26/513 (5%)
Query: 166 GQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGV 225
G+A LL +M+ P SYN V+ G + A L +M G S ++ T+G+
Sbjct: 159 GKAVSLLREMRR-NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 226 VMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMG 285
++ A C ++D A L++M G + VVY +LI + L +E++ G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 286 CTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEAR 345
+ T+N +I G CK+ ++ EA+++ + M+ RG P+ TY L+ GLC G+ EA
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 346 ALLN----KIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHG 401
LLN K N V N +IN G +A I + M PD T+NIL+ G
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGG 396
Query: 402 LCKQRRFGSALELVNAMAVKGC--EPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLS 459
LC + A +L+ M +P++++Y L+ G CKE +L +A I + ++ K
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK--- 453
Query: 460 LNTGDRI---------------EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEA 504
L GDR+ +A+ L++ + + N+ TY +I F + G L+ A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 505 HKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILING 564
L+ M YN L+ +LC G++D+ LFEEM R P +S NI+I+G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 565 LCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPD 624
+ +A L M GL+PD+ TY+ LIN K+G + EA++ FDK+ G PD
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 625 AVTYNTLISWHFKEGLFDDAFLILHKGVANGFV 657
A ++++ + +G D ++ K V V
Sbjct: 634 AHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 237/487 (48%), Gaps = 33/487 (6%)
Query: 211 MLSKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNR 270
ML +G + VY +++K LC E A SLLR+M ++ +P+ Y T+I +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 271 VSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGV 330
+ +AL L EM GC+ + T+ +I CK ++ EA + M G D + Y
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 331 LMHGLCRTGRVDEARALLNKI----PSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSV 386
L+ G C G +D +AL +++ S + NT+I G+ G+ EA IF + M+
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF-EFMIER 311
Query: 387 GCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKA 446
G P+V+T+ LI GLC + AL+L+N M K EPN VTY I+++ CK+G + A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 447 -------------------NIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEG--VTANT 485
NI++ + AKG ++EA L ML + +
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKG-------DLDEASKLLYLMLKDSSYTDPDV 424
Query: 486 VTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEE 545
++YN LIH + LH+A + + ++ + D +T N L+ + AG V+K + L+++
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 546 MMRKGIKPSSISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGC 605
+ I +S + +I+G C+T N A L M L P + YN L++ LCK G
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 606 IQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYI 665
+ +A LF+++Q + +PD V++N +I K G A +L G P+ T+
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 666 LVRNLVK 672
L+ +K
Sbjct: 605 LINRFLK 611
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 245/499 (49%), Gaps = 27/499 (5%)
Query: 184 TFRSYNVVLDVLVAGNCHKV----APNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSA 239
F YN ++L+ G C + A +L +M + P V+++ V++ C E++ A
Sbjct: 139 AFNVYNH--NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 240 CSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHG 299
L +M GC + V + LI A K+ ++ EA+ L+EM MG +D+ + +I G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 300 LCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARA----LLNKIPSAN 355
C + L D +L RG +P ITY L+ G C+ G++ EA ++ + N
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 356 VVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELV 415
V +I+G G+ EA + + M+ P+ T+NI+I+ LCK A+E+V
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLL-NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 416 NAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKG-------LSLNT------ 462
M + P+ +TY IL+ G C +G L++A+ ++ ML +S N
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 463 -GDRIEEALGLYQDMLLEGVTA-NTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDE 520
+R+ +AL +Y D+L+E + A + VT N L+++ L+ G +++A +L + +
Sbjct: 436 KENRLHQALDIY-DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 521 ITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFLRD 580
TY +I C G ++ GL +M ++PS N L++ LC+ + A +
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 581 MIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKEGL 640
M PD+V++N +I+G K G I+ A +L + G+ PD TY+ LI+ K G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 641 FDDAFLILHKGVANGFVPN 659
D+A K V +GF P+
Sbjct: 615 LDEAISFFDKMVDSGFEPD 633
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 172/360 (47%), Gaps = 57/360 (15%)
Query: 316 MLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVLLNTVINGYVISGRFDEA 375
ML RGF + + +L+ GLCR +A +LL ++ ++
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSL------------------- 173
Query: 376 KAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVD 435
+PDVF++N +I G C+ + ALEL N M GC ++VT+ IL+D
Sbjct: 174 -------------MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 436 GFCKEGQLEKANIIINEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAF 495
FCK G +++EA+G ++M G+ A+ V Y +LI F
Sbjct: 221 AFCKAG-----------------------KMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 496 LRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSS 555
G L L +++L RG ITYN LI+ C G + + +FE M+ +G++P+
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 556 ISCNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDK 615
+ LI+GLC K AL+ L MI + P+ VTYN +IN LCK G + +A+ + +
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 616 LQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFV--PNDATWYILVRNLVKE 673
++ PD +TYN L+ +G D+A +L+ + + P+ ++ L+ L KE
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 185/414 (44%), Gaps = 64/414 (15%)
Query: 180 GCQPTFRSYNVVLDVLVAGNCH----KVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNE 235
G P +YN L+ G C K A +F M+ +G+ P VYT+ ++ LC V +
Sbjct: 277 GDSPCAITYNT----LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 236 VDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEM-------------I 282
A LL M + PN+V Y +I+ L K V++A+ ++E M I
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 283 LMG--CTS----------------------DVQTFNDVIHGLCKVNRIHEAAKLVDRMLV 318
L+G C DV ++N +IHGLCK NR+H+A + D ++
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 319 RGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVV----LLNTVINGYVISGRFDE 374
+ D +T +L++ + G V++A L +I + +V +I+G+ +G +
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 375 AKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILV 434
AK + +S P VF +N L+ LCK+ A L M P++V++ I++
Sbjct: 513 AKGLLCKMRVS-ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 435 DGFCKEGQLEKANIIINEMLAKGLS-------------LNTGDRIEEALGLYQDMLLEGV 481
DG K G ++ A ++ M GLS L G ++EA+ + M+ G
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG-YLDEAISFFDKMVDSGF 630
Query: 482 TANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGA 535
+ ++++ + +G + +LV ++ + LD+ ++ +CN+ A
Sbjct: 631 EPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSA 684
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 96/239 (40%), Gaps = 35/239 (14%)
Query: 467 EEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPLDEITYNGL 526
E A Y+ ML N V+ + L+ +++ A ++ ML RG + +N L
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 527 IKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALE---------- 576
+K LC K + L EM R + P S N +I G C ++ ALE
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 577 -------------------------FLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALN 611
FL++M GL D+V Y SLI G C G +
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 612 LFDKLQAEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNL 670
LFD++ G P A+TYNTLI K G +A I + G PN T+ L+ L
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 21/255 (8%)
Query: 112 HTFDVYYVLIDKLGANKEFKVIDSVLL-----------------QMKEEGIICRESLFIL 154
D+Y +L++KLGA +V ++LL Q+ + I+ +
Sbjct: 442 QALDIYDLLVEKLGAGD--RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 155 IMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSK 214
++ + + G+ A LL M+ V QP+ YN +L L A LF +M
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMR-VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558
Query: 215 GISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEA 274
P V +F +++ ++ SA SLL M++ G P+ Y LI+ K + EA
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Query: 275 LMLLEEMILMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHG 334
+ ++M+ G D + V+ + +LV +++ + D +M
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDY 678
Query: 335 LCR-TGRVDEARALL 348
+C + +D A+ LL
Sbjct: 679 MCNSSANMDLAKRLL 693
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 2/171 (1%)
Query: 93 DVDTSMEIFTWAGSQEGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLF 152
DV+ +ME++ S D Y +ID V +L +M+ + +
Sbjct: 474 DVNKAMELWKQI-SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 153 ILIMKYYGRGGVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDML 212
++ + G QA RL +M+ P S+N+++D + K A +L M
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 213 SKGISPTVYTFGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIH 263
G+SP ++T+ ++ + +D A S M G P++ + +++
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/645 (25%), Positives = 293/645 (45%), Gaps = 39/645 (6%)
Query: 55 ESENEWERLLKP-FDLNELRKSLHKITPFQLCKLLRLPLDVDTSMEIFTWAGSQE----- 108
+++ W ++L F E+R I+PF ++ DV+ +++F W S++
Sbjct: 43 KTQQNWSQILDDCFADEEVR--FVDISPFVFDRIQ----DVEIGVKLFDWLSSEKKDEFF 96
Query: 109 --GY-CHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLFILIMKYYGRGGVP 165
G+ C +F + L + F I+ VL ++ E + ++ Y G
Sbjct: 97 SNGFACSSF------LKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSL 150
Query: 166 GQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGV 225
+A + + +Y P + N +L +LV A ++ +M +G S Y+ +
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI 210
Query: 226 VMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMG 285
++K +C +V+ L+ GC+PN V Y T+I K + A ++ +E+ L G
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 286 CTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTG-RVDEA 344
++TF +I+G CK + +L+ + RG ++ R G +VD A
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 345 RALLNKIPS---ANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNILIHG 401
++ I + +V N +IN G+ E F D G IP+ ++ LI
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGK-KEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 402 LCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGLSLN 461
CK + + A +L+ MA +GC+P+IVTY IL+ G G ++ A + +++ +G+S +
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 462 TG------------DRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVN 509
R A L+ +ML + + Y TLI F+R G EA K+ +
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 510 DMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTR 569
+ +G +D + +N +IK C +G +D+ L M + + P + + +I+G + +
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 570 KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYN 629
TA++ R M P++VTY SLING C G + A F ++Q + P+ VTY
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629
Query: 630 TLISWHFKE-GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 673
TLI KE + A + N VPN+ T+ L++ VK+
Sbjct: 630 TLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 264/570 (46%), Gaps = 56/570 (9%)
Query: 108 EGYCHTFDVYYVLIDKLGANKEFKVIDSVLLQMKEEGIICRESLF----ILIMKY-YGRG 162
+G+ T + + +I+ +F D +L ++KE G+ R S++ I+ KY +G
Sbjct: 269 KGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL--RVSVWFLNNIIDAKYRHGYK 326
Query: 163 GVPGQATRLLLDMKSVYGCQPTFRSYNVVLDVLVAGNCHKVAPNLFYDMLSKGISPTVYT 222
P ++ ++ C+P +YN++++ L +VA + KG+ P +
Sbjct: 327 VDPAESIGWII----ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 223 FGVVMKALCMVNEVDSACSLLRDMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMI 282
+ +++A C E D A LL M + GC P+ V Y LIH L S + +A+ + ++I
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 283 LMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVD 342
G + D +N ++ GLCK R A L ML R PD Y L+ G R+G D
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 343 EARALLN----KIPSANVVLLNTVINGYVISGRFDEAKAIFYDSMLSVGCIPDVFTFNIL 398
EAR + + K +VV N +I G+ SG DEA A + M +PD FT++ +
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACM-NRMNEEHLVPDKFTYSTI 561
Query: 399 IHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL 458
I G KQ+ +A+++ M C+PN+VTYT L++GFC +G + A
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA------------ 609
Query: 459 SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGS-LHEAHKLVNDMLFRGCP 517
EE +++M L + N VTY TLI + + S L +A M+ C
Sbjct: 610 --------EET---FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV 658
Query: 518 LDEITYNGLI---------KALCNAGAVDKGLG-----LFEEMMRKGIKPSSISCNILIN 563
+E+T+N L+ K L + G F M G + + N +
Sbjct: 659 PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALV 718
Query: 564 GLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNL-FDKLQAEGIY 622
LC TA F M+ +G +PD V++ ++++G C +G ++ N+ F L +G+
Sbjct: 719 CLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLE 778
Query: 623 PDAVTYNTLISWHFKEGLFDDAFLILHKGV 652
AV Y+ ++ H + + +A ILH V
Sbjct: 779 V-AVRYSQVLEQHLPQPVICEASTILHAMV 807
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 215/460 (46%), Gaps = 68/460 (14%)
Query: 261 LIHALSKSNRVSEALMLLEEMI-LMGCTSDVQTFNDVIHGLCKVNRIHEAAKLVDRMLVR 319
++HA ++S +S+A+ + + ++ L DV N ++ L K R+ +A K+ D M R
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 320 GFTPDDITYGVLMHGLCRTGRVDEARALLNK------IPSANVVLLNTVINGYVISGRFD 373
G + D+ + +L+ G+C G+V+ R L+ IP N+V NT+I GY G +
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP--NIVFYNTIIGGYCKLGDIE 257
Query: 374 EAKAIFYDSMLSVGCIPDVFTFNILIHGLCKQRRFGSALELVNAMAVKG----------- 422
A +F + L G +P + TF +I+G CK+ F ++ L++ + +G
Sbjct: 258 NAYLVFKELKLK-GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNI 316
Query: 423 ------------------------CEPNIVTYTILVDGFCKEGQLEKANIIINEMLAKGL 458
C+P++ TY IL++ CKEG+ E A ++E KGL
Sbjct: 317 IDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGL 376
Query: 459 SLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVNDMLFRGCPL 518
N ++Y LI A+ + A KL+ M RGC
Sbjct: 377 -----------------------IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 519 DEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTRKANTALEFL 578
D +TY LI L +G +D + + +++ +G+ P + N+L++GLC+T + A
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 579 RDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYNTLISWHFKE 638
+M+ R + PD Y +LI+G + G EA +F +G+ D V +N +I +
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 639 GLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINMES 678
G+ D+A +++ VP+ T+ ++ VK+ +M +
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 152/348 (43%), Gaps = 29/348 (8%)
Query: 335 LCRTGRVDEARALLNKIPSANVVL----LNTVINGYVISGRFDEAKAIFYDSMLSV-GCI 389
L R +E +L + + NV L L+ V++ Y SG +A I YD ++ + +
Sbjct: 109 LARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEI-YDYVVELYDSV 167
Query: 390 PDVFTFNILIHGLCKQRRFGSALELVNAMAVKGCEPNIVTYTILVDGFCKEGQLEKANII 449
PDV N L+ L K RR G A ++ + M +G + + ILV G C EG++E +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 450 INEMLAKGLSLNTGDRIEEALGLYQDMLLEGVTANTVTYNTLIHAFLRRGSLHEAHKLVN 509
I KG N V YNT+I + + G + A+ +
Sbjct: 228 IEGRWGKG-----------------------CIPNIVFYNTIIGGYCKLGDIENAYLVFK 264
Query: 510 DMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSISCNILINGLCRTR 569
++ +G T+ +I C G L E+ +G++ S N +I+ R
Sbjct: 265 ELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG 324
Query: 570 KANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIQEALNLFDKLQAEGIYPDAVTYN 629
E + +I PD+ TYN LIN LCK G + A+ D+ +G+ P+ ++Y
Sbjct: 325 YKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYA 384
Query: 630 TLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKEINME 677
LI + K +D A +L + G P+ T+ IL+ LV +M+
Sbjct: 385 PLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,608,537
Number of Sequences: 539616
Number of extensions: 10020421
Number of successful extensions: 44681
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 29603
Number of HSP's gapped (non-prelim): 3611
length of query: 681
length of database: 191,569,459
effective HSP length: 124
effective length of query: 557
effective length of database: 124,657,075
effective search space: 69433990775
effective search space used: 69433990775
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)