Query 040141
Match_columns 602
No_of_seqs 136 out of 745
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 05:31:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040141.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040141hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02255 H(+) -translocating i 100.0 2E-188 4E-193 1544.1 47.1 587 1-602 1-697 (765)
2 TIGR01104 V_PPase vacuolar-typ 100.0 1E-183 3E-188 1497.1 44.1 530 9-602 3-634 (697)
3 PLN02277 H(+) -translocating i 100.0 5E-181 1E-185 1484.4 42.6 536 16-602 2-678 (730)
4 PF03030 H_PPase: Inorganic H+ 100.0 2E-178 5E-183 1464.5 27.5 525 17-602 1-634 (682)
5 PRK00733 hppA membrane-bound p 100.0 2E-174 5E-179 1422.9 38.8 498 65-602 8-609 (666)
6 COG3808 OVP1 Inorganic pyropho 100.0 2E-173 4E-178 1370.9 37.5 526 8-602 4-646 (703)
7 PRK11677 hypothetical protein; 51.3 14 0.0003 35.4 2.9 27 331-357 3-29 (134)
8 PF08006 DUF1700: Protein of u 48.3 2.7E+02 0.0058 27.0 11.9 21 57-77 39-62 (181)
9 PF12331 DUF3636: Protein of u 34.9 20 0.00044 35.0 1.3 21 411-431 49-69 (149)
10 COG3105 Uncharacterized protei 33.4 43 0.00093 32.3 3.2 30 329-358 6-35 (138)
11 PF11368 DUF3169: Protein of u 31.2 2.5E+02 0.0054 28.7 8.6 24 134-157 132-155 (248)
12 PF00110 wnt: wnt family; Int 31.1 46 0.00099 35.7 3.4 22 494-515 22-43 (310)
13 PF03672 UPF0154: Uncharacteri 28.9 58 0.0012 27.8 2.9 32 476-521 3-34 (64)
14 COG5336 Uncharacterized protei 27.8 74 0.0016 29.9 3.6 25 329-353 47-71 (116)
15 PF14236 DUF4338: Domain of un 26.3 44 0.00096 35.9 2.2 54 481-534 137-194 (296)
16 PF12270 Cyt_c_ox_IV: Cytochro 25.3 4E+02 0.0086 25.9 8.1 34 6-39 34-67 (137)
17 smart00097 WNT1 found in Wnt-1 25.2 63 0.0014 34.7 3.1 22 494-515 19-40 (305)
18 PF06800 Sugar_transport: Suga 24.8 6.4E+02 0.014 26.9 10.3 95 273-380 104-207 (269)
19 PF00957 Synaptobrevin: Synapt 23.8 1.9E+02 0.004 24.9 5.2 39 65-103 40-82 (89)
20 PRK01844 hypothetical protein; 22.9 86 0.0019 27.4 2.9 33 476-522 10-42 (72)
21 PF02990 EMP70: Endomembrane p 22.8 3.5E+02 0.0076 30.9 8.6 29 135-163 298-326 (521)
22 COG1288 Predicted membrane pro 21.1 6.2E+02 0.013 29.3 9.7 36 67-102 256-291 (481)
23 PRK00523 hypothetical protein; 20.4 1.1E+02 0.0023 26.9 2.9 33 476-522 11-43 (72)
No 1
>PLN02255 H(+) -translocating inorganic pyrophosphatase
Probab=100.00 E-value=1.9e-188 Score=1544.07 Aligned_cols=587 Identities=73% Similarity=1.101 Sum_probs=537.5
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccCCCC--------CCCCCchhhhHHhhhcCCcchhhhHHHHHHH
Q 040141 1 MASWSEGHTQVLTPAAAFIGIGFALILWVLVSKVKISNGAG--------SNGDDDRLIEEEEAEEGVDSLEAAIKCAEIQ 72 (602)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~lgl~fa~~~~~~v~~~~~~~~~~--------~nG~~~~l~~~~e~~~G~~~~~v~~~m~~Ia 72 (602)
|+..|+.+++.+++.+++++++||+++++||+|++.+|++. .|+-+|++.++ +||+++++.++|||||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~e~---~eG~~~~~~~~~m~~Ia 77 (765)
T PLN02255 1 MAILSELATEVLIPVAALIGIAFALLQWYLVSRVKVSPDSGASSNGGGGGGGYGDYLIEE---EEGLNDHNVVAKCAEIQ 77 (765)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccccccccccccccccc---ccCccccccCHHHHHHH
Confidence 67789999999999999999999999999999998754311 22233344333 34666677899999999
Q ss_pred HHHHHhHhHhhhhhceehHHHHHHHHHHHHHHhhcccCCCCCCCCCccCCCcccccccchhhHHHHHHHHHHHHHHhhhh
Q 040141 73 NAISVGATSFLFPQYKYLSVVMGVFSTIIFLFQGSVKGFSTKHEPCTYNTGIMCKPALVNAIFSTIAFLLGALTSTLSGF 152 (602)
Q Consensus 73 ~~I~eGA~afL~~qYk~i~~~~~v~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~taiaFllGa~~S~laGy 152 (602)
++|||||++||+||||++++|.+++++++++++++.++.+.++++|.++++..+.++....++++++|++|++||.++||
T Consensus 78 ~~I~eGA~afL~rqyk~i~~~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fl~Ga~~S~~aG~ 157 (765)
T PLN02255 78 NAISEGATSFLFTEYKYVGIFMVIFAAVIFVFLGSVEGFSTKSQPCTYDKGKLCKPALANAAFSTVAFLLGALTSVVSGF 157 (765)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999777776444455666777788888889888889999999999999999999
Q ss_pred hhcchhhhhhhhhHHHHhcChhHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhhcccchhHHH
Q 040141 153 LGMKITTYANARTTLEARKGVSKAFITAFRARAVMGLLLAANCLLVLYVSINLFKLYYDDDWEGLYESITGYDLSGSSMA 232 (602)
Q Consensus 153 iGM~iAt~aN~Rta~AA~~~~~~al~vAfrgGaVmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iA 232 (602)
+|||+|||+|+|||+|||+++++||++|||+|+||||+|++++|++++++|++|+.++++++.+.+++++||+||||++|
T Consensus 158 iGM~vat~ANvRtA~AA~~gl~~al~vAfr~GaVmGl~vvgl~Llgl~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iA 237 (765)
T PLN02255 158 LGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLYEAITGYGLGGSSMA 237 (765)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhHHhhhcccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999875455554446789999999999999
Q ss_pred HHHHhcCcccccchh----------------------hhhcccCCccccccccccchhhhHH-------HH---------
Q 040141 233 LFGRVGGGIYTKAVD----------------------VIADNVGYNVGEIAGMGFDLFGSYA-------VI--------- 274 (602)
Q Consensus 233 LFaRvGGGIyTKAAD----------------------vIADnVGDNVGD~AGmgADLFESy~-------li--------- 274 (602)
||+|||||||||||| ||||||||||||||||||||||||+ ++
T Consensus 238 lFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~s~vaamilg~~~~~~~~ 317 (765)
T PLN02255 238 LFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGIN 317 (765)
T ss_pred HHHHHcCceeeeccccchhhhhhhhcCCCCCCCCCcchHHHhhcccccccccccchhHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999 9999999999999999999999999 22
Q ss_pred ------------HhhhhHhhhhhheeeeeeccccccchHHHHHHHHHHHHHHHHHHHHh---hh-----h----------
Q 040141 275 ------------LSMGIVVCMITTLFATDLFQIKSVSEIELSFKRQLLISTIFDDCWHC---HL-----A---------- 324 (602)
Q Consensus 275 ------------sa~gi~~sii~~~~~~~~~~~~~~~~~~~aL~~g~~is~~l~~v~~~---~~-----~---------- 324 (602)
+++||++|++++++++.+++.++++||+++||+++|+|++++++.++ .+ .
T Consensus 318 ~~~~~v~~PLli~~~gii~siig~~~v~~~~~~~~~~~~~~aL~~g~~~s~~l~~v~~~~~~~~~l~~~~~~~~~g~~~~ 397 (765)
T PLN02255 318 HDFTAMCYPLLISSVGIIVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTVGIAVVSWLALPSSFTIFNFGTQKV 397 (765)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHheecccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcccccccc
Confidence 23457788888888765556777779999999999999999998733 11 0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhccCCcccc--ccccccCcCchhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 040141 325 SNSRHLFFCVATGLWAGLVIVYTTEYYTSNAYSA--GLADSYKRGASTNVIFDLALGYKSVIIPIFAIAVAAYASFSLAA 402 (602)
Q Consensus 325 ~~~~~~f~~~~~Gl~~g~li~~~TeYyTs~~y~P--~IA~as~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l~G 402 (602)
..+|++|+|+++|+++|++|+++||||||++||| +||++|+||||||||+||++|||||++|+++|++++++||+++|
T Consensus 398 ~~~~~~f~~~~iGl~~g~lI~~iTeYyTs~~y~PV~~IA~aS~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l~g 477 (765)
T PLN02255 398 VKNWQLFFCVAIGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIYVSFSLAA 477 (765)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1357899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhheeecccccccCcchhhhhhc-----------------------CcchhHHHHHHHHHHHHH
Q 040141 403 MYGIAVAALGMLSTIATRLTIDAYGPISGIAGGIAEMAL-----------------------HGFAIRSAAVVSLALFRA 459 (602)
Q Consensus 403 lyGiAiAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~-----------------------KGfAIGSAaL~alaLF~a 459 (602)
|||+|+|++|||||++++|++|+||||+||||||+|||+ ||||||||+|+||+||++
T Consensus 478 lyGiaiAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~l~~~VR~~TD~LDAvGNTTkAi~KGfAIGSAaLaalaLF~a 557 (765)
T PLN02255 478 MYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGA 557 (765)
T ss_pred HHHHHHHHHHHHHHhHHhheeecccCcccCccCHHHHhcCCHHHHHHhhhhcccCCchhhhcccchhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 999999999999999999
Q ss_pred HHhhhCCceeecCCchhHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCCcccc-----ccccCCcc
Q 040141 460 FVSQAGIETVNLLTPKAFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQTTQLV-----SRFPLMPH 534 (602)
Q Consensus 460 y~~~~~~~~v~l~~p~V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg~~kP-----V~I~T~~A 534 (602)
|+++.++..+||.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||||||||||+|| ||||||+|
T Consensus 558 y~~~~~~~~~~l~~P~Vl~GlliG~mlpflFsal~m~AVg~aA~~mV~EVRRQFreipGimeG~~kPDY~~cV~I~T~aA 637 (765)
T PLN02255 558 FVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDAS 637 (765)
T ss_pred HHHhcCCCeeecCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhcCCCCCChHHHHHHHHHHH
Confidence 9999888889999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred hhhhcchhhHHHHhHHHHHhhhcccccc----ceeeecccccccccccccchhhhhhcCCCccccccccccC
Q 040141 535 PEKMIPQGALVILTPLIAGTLFGVETLA----GSLVSGVQFVQLFPFFFSPHVAISASNTGGAWDNAKKYIE 602 (602)
Q Consensus 535 lkeMi~Pgllail~Pi~vG~l~G~~al~----G~lvsG~~~~~~f~~f~~~~lAi~m~NaGGAWDNAKKyIE 602 (602)
|||||+|++|++++|+++|++||+++++ |+++||++ ||+||+|+||||||||||||
T Consensus 638 lkeMi~Pgll~v~~Pi~vg~~~G~~al~GlL~G~~vsGv~------------lAi~maNaGGAWDNAKKyIE 697 (765)
T PLN02255 638 IKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQ------------IAISASNTGGAWDNAKKYIE 697 (765)
T ss_pred HHhhhHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH------------HHHHHhcCcchHHhHHHHHH
Confidence 9999999999999999999999999988 88899999 99999999999999999999
No 2
>TIGR01104 V_PPase vacuolar-type H(+)-translocating pyrophosphatase. This model describes proton pyrophosphatases from eukaryotes (predominantly plants), archaea and bacteria. It is an integral membrane protein and is suggested to have about 15 membrane spanning domains. Proton translocating inorganic pyrophosphatase, like H(+)-ATPase, acidifies the vacuoles and is pivotal to the vacuolar secondary active transport systems in plants.
Probab=100.00 E-value=1.4e-183 Score=1497.11 Aligned_cols=530 Identities=68% Similarity=1.027 Sum_probs=491.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheeccCCCCCCCCCchhhhHHhhhcCCcchhhhHHHHHHHHHHHHhHhHhhhhhce
Q 040141 9 TQVLTPAAAFIGIGFALILWVLVSKVKISNGAGSNGDDDRLIEEEEAEEGVDSLEAAIKCAEIQNAISVGATSFLFPQYK 88 (602)
Q Consensus 9 ~~~~~~~~~~lgl~fa~~~~~~v~~~~~~~~~~~nG~~~~l~~~~e~~~G~~~~~v~~~m~~Ia~~I~eGA~afL~~qYk 88 (602)
..|+++++++++++|++++++||+|++ + | +||||||+++|||||++||+||||
T Consensus 3 ~~~~~~~~~~~gl~~a~~~~~~v~~~~-----------------~----G------~~~M~~Ia~~I~eGA~afL~rqyk 55 (697)
T TIGR01104 3 TEILIPVCAVIGIAYAVLQWVWVSRVK-----------------L----G------TAKMAEIQQAISEGATAFLFTEYK 55 (697)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCC-----------------C----C------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457888999999999999999999953 2 7 999999999999999999999999
Q ss_pred ehHHHHHHHHHHHHHHhhcccCCCCCCCCCccCCCcccccccchhhHHHHHHHHHHHHHHhhhhhhcchhhhhhhhhHHH
Q 040141 89 YLSVVMGVFSTIIFLFQGSVKGFSTKHEPCTYNTGIMCKPALVNAIFSTIAFLLGALTSTLSGFLGMKITTYANARTTLE 168 (602)
Q Consensus 89 ~i~~~~~v~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~taiaFllGa~~S~laGyiGM~iAt~aN~Rta~A 168 (602)
++++|.+++++++++++++.+. ...+++++|++|++||.+|||+|||+|||+|+|||+|
T Consensus 56 ~i~~~~vi~~v~l~~~~~~~~~---------------------~~~~~a~~Fl~Ga~~S~laG~iGM~iat~aNvRtA~A 114 (697)
T TIGR01104 56 YVAVFMVAFAVLIFVFLGSREG---------------------FSDFSTVAFLLGAVTSLLAGYLGMKIATYANARTTLE 114 (697)
T ss_pred HHHHHHHHHHHHHHHHhccccc---------------------chhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 9999999999999766543110 0127999999999999999999999999999999999
Q ss_pred HhcChhHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhhcccchhHHHHHHHhcCcccccchh-
Q 040141 169 ARKGVSKAFITAFRARAVMGLLLAANCLLVLYVSINLFKLYYDDDWEGLYESITGYDLSGSSMALFGRVGGGIYTKAVD- 247 (602)
Q Consensus 169 A~~~~~~al~vAfrgGaVmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKAAD- 247 (602)
||+++++||++|||||+||||+|+|++|+++.++|++|+.++++++.+++++++||+||||++|||+||||||||||||
T Consensus 115 A~~~~~~al~vafrgGaVmGl~vvgl~Llgl~~~~~i~~~~~~~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKAADV 194 (697)
T TIGR01104 115 ARKGVGKALIVAFRSGAVMGFLLAGLGLLVLYITILVFKIYYGDDWEGLFEPITGYGFGASSMALFGRVGGGIYTKAADV 194 (697)
T ss_pred HHhCHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHhcccCchhhhhhhHHhhhcccHHHHHHHHHHcCceeeecccc
Confidence 9999999999999999999999999999999999999975444554446789999999999999999999999999999
Q ss_pred ---------------------hhhcccCCccccccccccchhhhHH-------H---------------------HHhhh
Q 040141 248 ---------------------VIADNVGYNVGEIAGMGFDLFGSYA-------V---------------------ILSMG 278 (602)
Q Consensus 248 ---------------------vIADnVGDNVGD~AGmgADLFESy~-------l---------------------isa~g 278 (602)
||||||||||||||||||||||||+ + ++++|
T Consensus 195 GADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADlFESy~~s~iaamvlg~~~~~~~~~~~~~v~~Pl~~~~~g 274 (697)
T TIGR01104 195 GADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLFESYAESSCAALVLASISSFGLPHDFTAMLYPLALSSVG 274 (697)
T ss_pred chhhhcccccCCCCCCCCCchhHHHhcCCcccchhcccchHHHHHHHHHHHHHHHhhhhhcccccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999 1 22345
Q ss_pred hHhhhhhheeeeeeccccccchHHHHHHHHHHHHHHHHHHHHh---hhh---------------cchhHHHHHHHHHHHH
Q 040141 279 IVVCMITTLFATDLFQIKSVSEIELSFKRQLLISTIFDDCWHC---HLA---------------SNSRHLFFCVATGLWA 340 (602)
Q Consensus 279 i~~sii~~~~~~~~~~~~~~~~~~~aL~~g~~is~~l~~v~~~---~~~---------------~~~~~~f~~~~~Gl~~ 340 (602)
|++|++++++ +|.++++||+++||+++|+|++++++.++ .+. .++|++|+|+++|+++
T Consensus 275 i~~Siig~~~----v~~~~~~~~~~aL~~g~~~s~~l~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~Gl~~ 350 (697)
T TIGR01104 275 ILVCLLTTLF----VKIKPVKEIEPALKKQLIISTVLMTVGVAVISWVALPTGFTIFNFGTQKEVSNWQLFLCVAVGLWA 350 (697)
T ss_pred HHHHHHHheE----EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccchHHHHHHHHHHHHH
Confidence 6677776655 45667779999999999999999999833 111 1357899999999999
Q ss_pred HHHHHHhhhhccCCcccc--ccccccCcCchhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 040141 341 GLVIVYTTEYYTSNAYSA--GLADSYKRGASTNVIFDLALGYKSVIIPIFAIAVAAYASFSLAAMYGIAVAALGMLSTIA 418 (602)
Q Consensus 341 g~li~~~TeYyTs~~y~P--~IA~as~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l~GlyGiAiAa~GMLst~g 418 (602)
|++|+++||||||++||| +||++|+||||||||+||++|||||++|+++|++++++||+++||||+|+|++|||||++
T Consensus 351 g~lI~~iTeYyTs~~y~PV~~IA~as~tG~AtnII~Gla~Gm~St~~pvl~I~~~i~~sy~~~GlyGiaiAa~GMLst~g 430 (697)
T TIGR01104 351 GLLIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAASIIVSFSFAGMYGIAMAALGMLSTAG 430 (697)
T ss_pred HHHHHHhheeecCCCCCcHHHHHHHhCcCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeecccccccCcchhhhhhc-----------------------CcchhHHHHHHHHHHHHHHHhhhCCceeecCCch
Q 040141 419 TRLTIDAYGPISGIAGGIAEMAL-----------------------HGFAIRSAAVVSLALFRAFVSQAGIETVNLLTPK 475 (602)
Q Consensus 419 ~~la~DayGPIaDNAGGIaEMs~-----------------------KGfAIGSAaL~alaLF~ay~~~~~~~~v~l~~p~ 475 (602)
++|++|+||||+||||||+|||+ ||||||||+|+||+||++|++++++..+||.||+
T Consensus 431 ~~la~DayGPIaDNAgGIaEMs~l~~~VR~~TD~LDavGNTT~Ai~KGfAIGSAaL~alaLF~ay~~~~~~~~~~l~~p~ 510 (697)
T TIGR01104 431 TGLAIDAYGPISDNAGGIAEMAGLPHRVRERTDALDAVGNTTAAIGKGFAIGSAALVALALFGAFVSRAVITTVDVLTPK 510 (697)
T ss_pred heeeeecccCcccCcccHHHHhcCCHHHHHhhhhccccCCcchhhccceehhhHHHHHHHHHHHHHHHhccCeeecCCch
Confidence 99999999999999999999998 9999999999999999999999888889999999
Q ss_pred hHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCCcccc-----ccccCCcchhhhcchhhHHHHhHH
Q 040141 476 AFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQTTQLV-----SRFPLMPHPEKMIPQGALVILTPL 550 (602)
Q Consensus 476 V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg~~kP-----V~I~T~~AlkeMi~Pgllail~Pi 550 (602)
|++|+|+|+|+|||||+++|+||||+|++|||||||||||||||||||+|| ||||||+||||||+|+++++++|+
T Consensus 511 vl~GlliG~mlpflFsal~m~AVg~aA~~mV~EVRRQFreipGi~eG~~kPdY~~cV~I~T~aAlkeMi~Pgll~i~~Pi 590 (697)
T TIGR01104 511 VFIGLFVGAMLPYWFSSMTMKSVGRAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGLLVMLTPL 590 (697)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCCCCcHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHhhhcccccc----ceeeecccccccccccccchhhhhhcCCCccccccccccC
Q 040141 551 IAGTLFGVETLA----GSLVSGVQFVQLFPFFFSPHVAISASNTGGAWDNAKKYIE 602 (602)
Q Consensus 551 ~vG~l~G~~al~----G~lvsG~~~~~~f~~f~~~~lAi~m~NaGGAWDNAKKyIE 602 (602)
++|++||+++++ |+++||++ ||+||+|+||||||||||||
T Consensus 591 ~vG~~~G~~al~GlL~G~~vsG~~------------lAi~m~NaGGAWDNAKKyIE 634 (697)
T TIGR01104 591 IVGFLFGVETLSGVLAGVLVSGVQ------------IAISASNTGGAWDNAKKYIE 634 (697)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH------------HHHHHhcCcchHHhHHHHHh
Confidence 999999999998 88899999 99999999999999999999
No 3
>PLN02277 H(+) -translocating inorganic pyrophosphatase
Probab=100.00 E-value=5e-181 Score=1484.35 Aligned_cols=536 Identities=34% Similarity=0.514 Sum_probs=482.5
Q ss_pred HHHHHHHHHHHHHHHHhheeccCCCCCCCCCchhhhHHhhhcCCcchhhhHHHHHHHHHHHHhHhHhhhhhceehHHHHH
Q 040141 16 AAFIGIGFALILWVLVSKVKISNGAGSNGDDDRLIEEEEAEEGVDSLEAAIKCAEIQNAISVGATSFLFPQYKYLSVVMG 95 (602)
Q Consensus 16 ~~~lgl~fa~~~~~~v~~~~~~~~~~~nG~~~~l~~~~e~~~G~~~~~v~~~m~~Ia~~I~eGA~afL~~qYk~i~~~~~ 95 (602)
+++++++||+++++||+|++ + | +||||||+++|||||++||+||||++++|.+
T Consensus 2 ~~~l~l~~a~~~~~~v~~~~-----------------~----G------~~~M~~Ia~~I~eGA~afL~~qyk~i~~~~v 54 (730)
T PLN02277 2 VCIISLLFSLYLTKWVLAKD-----------------E----G------PPEMVEISDAIRDGAEGFFRTQYGTISKMAV 54 (730)
T ss_pred hHHHHHHHHHHHHHHHHcCC-----------------C----C------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999952 2 7 8999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCccCCCcccccccchhhHHHHHHHHHHHHHHhhhhhhcchhhhhhhhhHHHHhcChhH
Q 040141 96 VFSTIIFLFQGSVKGFSTKHEPCTYNTGIMCKPALVNAIFSTIAFLLGALTSTLSGFLGMKITTYANARTTLEARKGVSK 175 (602)
Q Consensus 96 v~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~taiaFllGa~~S~laGyiGM~iAt~aN~Rta~AA~~~~~~ 175 (602)
++++++++++.+. +.+++ |. ....++...+++++++|++|++||.+|||+|||+|||+|+|||+|||+++++
T Consensus 55 v~~~~l~~~~~~~-~~~~~-~~------~~~~~~~~~~~~~a~~Fl~Ga~~S~laG~iGM~vAt~aNvRtA~AA~~~~~~ 126 (730)
T PLN02277 55 VLAFVILGIYLFR-SLTPQ-QE------AAGLGRATSAYITVASFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSARE 126 (730)
T ss_pred HHHHHHHHHHhcc-ccccc-cc------cccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHH
Confidence 9999997665542 11111 10 1122333456889999999999999999999999999999999999999999
Q ss_pred HHHhhccccchHHHHHHHHHHHHHHHHHHHHhhccCC------cchhhhhhhhhcccchhHHHHHHHhcCcccccchh--
Q 040141 176 AFITAFRARAVMGLLLAANCLLVLYVSINLFKLYYDD------DWEGLYESITGYDLSGSSMALFGRVGGGIYTKAVD-- 247 (602)
Q Consensus 176 al~vAfrgGaVmGl~vvglgLl~l~~~~~~~~~~~~~------~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKAAD-- 247 (602)
||++|||||+||||+|+|++|+++.++|++|..+++. +..+.+++++||+||||++|||+||||||||||||
T Consensus 127 al~vAfrgGaVmGl~vvgl~Llgl~~~~~i~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKAADVG 206 (730)
T PLN02277 127 ALQIAVRAGGFSALVVVGMTVLGVAILYATFYVWLGVDSPGGMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVG 206 (730)
T ss_pred HHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHhhhccHHHHHHHHHHcCceeeeccccc
Confidence 9999999999999999999999999999998643321 11235679999999999999999999999999999
Q ss_pred --------------------hhhcccCCccccccccccchhhhHH-------HH-----------------------Hhh
Q 040141 248 --------------------VIADNVGYNVGEIAGMGFDLFGSYA-------VI-----------------------LSM 277 (602)
Q Consensus 248 --------------------vIADnVGDNVGD~AGmgADLFESy~-------li-----------------------sa~ 277 (602)
||||||||||||||||||||||||+ ++ +++
T Consensus 207 ADLVGKVEagIPEDDPRNPAvIADnVGDNVGDvAGmgADLFESy~~siiaamiLg~~~~~~~~~~~~~~~v~~Pl~i~~~ 286 (730)
T PLN02277 207 ADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAKRCKIEDPSGFILFPLVVHSF 286 (730)
T ss_pred hhhhhhhhcCCCCCCCCCchHHHHHhCCcccccccccchhHHHHHHHHHHHHHHHHHHhhccCcccccccchHHHHHHHH
Confidence 9999999999999999999999998 22 223
Q ss_pred hhHhhhhhheeeeeeccccc-------cchHHHHHHHHHHHHHHHHHHHHh--h-hhc-------chhHHHHHHHHHHHH
Q 040141 278 GIVVCMITTLFATDLFQIKS-------VSEIELSFKRQLLISTIFDDCWHC--H-LAS-------NSRHLFFCVATGLWA 340 (602)
Q Consensus 278 gi~~sii~~~~~~~~~~~~~-------~~~~~~aL~~g~~is~~l~~v~~~--~-~~~-------~~~~~f~~~~~Gl~~ 340 (602)
||++|+++++++ |.++ ++||+++||+|+|+|+++++++++ . +.. .||++|+|+++|+++
T Consensus 287 gii~Siig~~~v----r~~~~~~~~~~~~~p~~aL~~g~~vs~~l~~v~~~~~~~~~l~~~~~~~~~~~~f~~~~~Gl~~ 362 (730)
T PLN02277 287 DLVVSSIGILSI----KGTRDSSVKSPVEDPMAVLQKGYSVTIILAVVTFGASTRWLLYTEQAPSAWFNFALCGLVGIIT 362 (730)
T ss_pred HHHHHHHHHheE----eccCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 667777777665 3333 258999999999999999999843 1 111 357899999999999
Q ss_pred HHHHHHhhhhccCCcccc--ccccccCcCchhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHH--------------HHH
Q 040141 341 GLVIVYTTEYYTSNAYSA--GLADSYKRGASTNVIFDLALGYKSVIIPIFAIAVAAYASFSLA--------------AMY 404 (602)
Q Consensus 341 g~li~~~TeYyTs~~y~P--~IA~as~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l~--------------Gly 404 (602)
|++|+++||||||++||| +||++|+||||||||+||++|||||++|+++|++++++||+++ |||
T Consensus 363 g~lI~~iTeYYTs~~y~PV~~IA~aS~tG~ATnII~Gla~Gm~St~~Pvl~I~~ai~~sy~l~~~~~~~~~~~~~~~Gly 442 (730)
T PLN02277 363 AYAFVWISQYYTDYKYEPVRTLALASTTGHGTNIIAGVSLGLESTALPVLVISVAIISAYWLGNTSGLVDENGNPTGGLF 442 (730)
T ss_pred HHHHHHeeeeeCCCCCCcHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHH
Confidence 999999999999999999 9999999999999999999999999999999999999999995 999
Q ss_pred HHHHHHHHhhhhhhhhheeecccccccCcchhhhhhc-----------------------CcchhHHHHHHHHHHHHHHH
Q 040141 405 GIAVAALGMLSTIATRLTIDAYGPISGIAGGIAEMAL-----------------------HGFAIRSAAVVSLALFRAFV 461 (602)
Q Consensus 405 GiAiAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~-----------------------KGfAIGSAaL~alaLF~ay~ 461 (602)
|+|+|++|||||++++|++|+||||+||||||+|||+ ||||||||+|+||+||++|+
T Consensus 443 GialAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~l~~~VR~~TD~LDavGNTTaAi~KGfAIGSAaL~alaLF~ay~ 522 (730)
T PLN02277 443 GTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYM 522 (730)
T ss_pred HHHHHHHHHHhhcceeEEeecccCcccCcccHHHHccCCchhhhhccccccccCcchhhcccchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 99999999999999999999
Q ss_pred hhhC------CceeecCCchhHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCCcccc-----cccc
Q 040141 462 SQAG------IETVNLLTPKAFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQTTQLV-----SRFP 530 (602)
Q Consensus 462 ~~~~------~~~v~l~~p~V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg~~kP-----V~I~ 530 (602)
++++ ++.+||.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||||||||||+|| ||||
T Consensus 523 ~~~~~~~~~~~~~~~l~~p~Vl~GlliG~mlpflFsal~m~AVg~aA~~mVeEVRRQFreipGi~eG~~kPdY~~cV~I~ 602 (730)
T PLN02277 523 DEVSAFAGVPFKEVDIAIPEVFVGGLLGSMLIFLFSAWACAAVGRTAQEVVNEVRRQFAERPGIMDYKEKPDYGRCVAIV 602 (730)
T ss_pred HHhhhhhccccceeeCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCChHHHHHHH
Confidence 9863 4569999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCcchhhhcchhhHHHHhHHHHHhhh------------cccccc----ceeeecccccccccccccchhhhhhcCCCccc
Q 040141 531 LMPHPEKMIPQGALVILTPLIAGTLF------------GVETLA----GSLVSGVQFVQLFPFFFSPHVAISASNTGGAW 594 (602)
Q Consensus 531 T~~AlkeMi~Pgllail~Pi~vG~l~------------G~~al~----G~lvsG~~~~~~f~~f~~~~lAi~m~NaGGAW 594 (602)
||+||||||+|++|++++|+++|++| |+++++ |+++||++ ||+||+|+||||
T Consensus 603 T~aAlreMi~Pgllail~Pi~vg~~~~~~G~~~~~~~~g~~al~GlL~G~~vsGv~------------lAi~m~NaGGAW 670 (730)
T PLN02277 603 ASAALREMIKPGALAVISPIVVGLVFRILGYATGQPLLGAKVVAGMLMFATVSGIL------------MALFLNTAGGAW 670 (730)
T ss_pred HHHHHHhhhhhhHHHHHhhhhhhhhhhhccccccccchhHHHHHHHHHHHHHHHHH------------HHHHHhcCchhH
Confidence 99999999999999999999999985 457777 88899999 999999999999
Q ss_pred cccccccC
Q 040141 595 DNAKKYIE 602 (602)
Q Consensus 595 DNAKKyIE 602 (602)
||||||||
T Consensus 671 DNAKKyIE 678 (730)
T PLN02277 671 DNAKKYIE 678 (730)
T ss_pred HhHHHHHh
Confidence 99999999
No 4
>PF03030 H_PPase: Inorganic H+ pyrophosphatase; InterPro: IPR004131 Two types of proteins that hydrolyse inorganic pyrophosphate (PPi), very different in both amino acid sequence and structure, have been characterised to date: soluble and membrane-bound proton-pumping pyrophosphatases (sPPases and H(+)-PPases, respectively). sPPases are ubiquitous proteins that hydrolyse PPi to release heat, whereas H+-PPases, so far unidentified in animal and fungal cells, couple the energy of PPi hydrolysis to proton movement across biological membranes [, ]. The latter type is represented by this group of proteins. H+-PPases (3.6.1.1 from EC) are also called vacuolar-type inorganic pyrophosphatases (V-PPase) or pyrophosphate-energised vacuolar membrane proton pumps []. In plants, vacuoles contain two enzymes for acidifying the interior of the vacuole, the V-ATPase and the V-PPase (V is for vacuolar) []. Two distinct biochemical subclasses of H+-PPases have been characterised to date: K+-stimulated and K+-insensitive [, ]. For additional information please see [, ].; GO: 0004427 inorganic diphosphatase activity, 0009678 hydrogen-translocating pyrophosphatase activity, 0015992 proton transport, 0016020 membrane; PDB: 4A01_A.
Probab=100.00 E-value=2.3e-178 Score=1464.49 Aligned_cols=525 Identities=45% Similarity=0.706 Sum_probs=479.5
Q ss_pred HHHHHHHHHHHHHHHhheeccCCCCCCCCCchhhhHHhhhcCCcchhhhHHHHHHHHHHHHhHhHhhhhhceehHHHHHH
Q 040141 17 AFIGIGFALILWVLVSKVKISNGAGSNGDDDRLIEEEEAEEGVDSLEAAIKCAEIQNAISVGATSFLFPQYKYLSVVMGV 96 (602)
Q Consensus 17 ~~lgl~fa~~~~~~v~~~~~~~~~~~nG~~~~l~~~~e~~~G~~~~~v~~~m~~Ia~~I~eGA~afL~~qYk~i~~~~~v 96 (602)
++++++||+++++||+|+ |+ | ++|||||+++|||||++||+||||++++|+++
T Consensus 1 ~~~~l~~a~~~~~~v~~~-----------------~~----G------~~~m~~Ia~~I~eGA~aFL~reYk~i~~~~vi 53 (682)
T PF03030_consen 1 AVLGLIFALFLARWVLKQ-----------------DE----G------NEKMQEIAAAIQEGAMAFLKREYKTIAIFIVI 53 (682)
T ss_dssp -HHHHHHHHHHHHHHHTS-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhcC-----------------CC----C------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999995 32 7 89999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccCCCcccccccchhhHHHHHHHHHHHHHHhhhhhhcchhhhhhhhhHHHHh-cChhH
Q 040141 97 FSTIIFLFQGSVKGFSTKHEPCTYNTGIMCKPALVNAIFSTIAFLLGALTSTLSGFLGMKITTYANARTTLEAR-KGVSK 175 (602)
Q Consensus 97 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~taiaFllGa~~S~laGyiGM~iAt~aN~Rta~AA~-~~~~~ 175 (602)
++++|++++...+ ..+++++++|++|++||.+|||+||++|||+|+|||++|| +|+++
T Consensus 54 ~~~ll~~~~~~~~---------------------~~~~~taiaFliGa~~S~laGyiGM~vAt~aN~Rta~AAr~~gl~~ 112 (682)
T PF03030_consen 54 VAILLFFLLGFLG---------------------GQGWWTAIAFLIGALCSALAGYIGMRVATRANVRTANAARTRGLNK 112 (682)
T ss_dssp HHHHHHHHHHCCC---------------------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-HHH
T ss_pred HHHHHHHHHhhcc---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhHHHHhcCChHh
Confidence 9999988764311 1468999999999999999999999999999999999995 99999
Q ss_pred HHHhhccccchHHHHHHHHHHHHHHHHHHHHhhccC-CcchhhhhhhhhcccchhHHHHHHHhcCcccccchh-------
Q 040141 176 AFITAFRARAVMGLLLAANCLLVLYVSINLFKLYYD-DDWEGLYESITGYDLSGSSMALFGRVGGGIYTKAVD------- 247 (602)
Q Consensus 176 al~vAfrgGaVmGl~vvglgLl~l~~~~~~~~~~~~-~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKAAD------- 247 (602)
||++|||+|+||||+|+|++|++++++|++++..++ .++++.+++++||+||+|++|||+||||||||||||
T Consensus 113 AL~vAfrgGaVmGl~vvglgLlgl~~l~~i~~~~~~~~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKAADVGADLVG 192 (682)
T PF03030_consen 113 ALQVAFRGGAVMGLSVVGLGLLGLSILFLIFSAFFGKTNPENAPEALSGFGFGASSIALFARVGGGIYTKAADVGADLVG 192 (682)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhHHHHHHHhhcchHHHHHHHHHHcCceehhHHHHhhHHHH
Confidence 999999999999999999999999999999976443 345667899999999999999999999999999999
Q ss_pred ---------------hhhcccCCccccccccccchhhhHH----------------------------HHHhhhhHhhhh
Q 040141 248 ---------------VIADNVGYNVGEIAGMGFDLFGSYA----------------------------VILSMGIVVCMI 284 (602)
Q Consensus 248 ---------------vIADnVGDNVGD~AGmgADLFESy~----------------------------lisa~gi~~sii 284 (602)
||||||||||||||||||||||||+ +++++||++|++
T Consensus 193 KVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~sivaamilg~~~~~~~~~~~~~v~~Pl~i~~~gii~Sii 272 (682)
T PF03030_consen 193 KVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVVSIVAAMILGSTLFGTNGFNFSGVLFPLLIAAVGIIASII 272 (682)
T ss_dssp HTTS---TT-TT-TTHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTSHHHHTT-HHHHTHHHHHHHHHHHHHHH
T ss_pred HHhhCCCCCCcccchHHHHHHHhhhhhhhcchhHHHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 677789999999
Q ss_pred hheeeeeeccccccchHHHHHHHHHHHHHHHHHHHHh---hhhc---------chhHHHHHHHHHHHHHHHHHHhhhhcc
Q 040141 285 TTLFATDLFQIKSVSEIELSFKRQLLISTIFDDCWHC---HLAS---------NSRHLFFCVATGLWAGLVIVYTTEYYT 352 (602)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~aL~~g~~is~~l~~v~~~---~~~~---------~~~~~f~~~~~Gl~~g~li~~~TeYyT 352 (602)
++++++.. +.++.+||+++||+|+++|+++++++++ .+.. .+|++|+|+++|+++|++|+++|||||
T Consensus 273 g~~~v~~~-~~~~~~~~~~aL~~g~~vs~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iGl~~g~lI~~~TeYyT 351 (682)
T PF03030_consen 273 GIFFVRTK-KGATSKDPMKALRRGYIVSSILSIILFFFLTYWLLGFSFFGSGISWWGLFGCVLIGLVAGVLIGFITEYYT 351 (682)
T ss_dssp HHHHHHTT----SGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred heeEEEec-CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 98765421 2223459999999999999999999844 2222 578999999999999999999999999
Q ss_pred CCcccc--ccccccCcCchhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHhhhhhhhhheeec
Q 040141 353 SNAYSA--GLADSYKRGASTNVIFDLALGYKSVIIPIFAIAVAAYASFSLA-----AMYGIAVAALGMLSTIATRLTIDA 425 (602)
Q Consensus 353 s~~y~P--~IA~as~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l~-----GlyGiAiAa~GMLst~g~~la~Da 425 (602)
|++||| +||++|+||||||||+|+++||+||++|+++|++++++||+++ |+||+|+|++|||||++++|++|+
T Consensus 352 s~~~~PVr~IA~as~tG~AtnII~Gla~G~~St~~pvl~i~~~i~~sy~l~~~~~~GlyGiaiAa~GMLst~g~~la~Da 431 (682)
T PF03030_consen 352 SYSYRPVREIAEASETGPATNIISGLAVGMESTAIPVLVIAAAILISYYLGGGSGPGLYGIAIAAVGMLSTAGIVLAMDA 431 (682)
T ss_dssp -TTSHHHHHHHHHGGG-HHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred CCCCchHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHHHHhhc
Confidence 999999 9999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccccccCcchhhhhhc-----------------------CcchhHHHHHHHHHHHHHHHhhh------CCceeecCCchh
Q 040141 426 YGPISGIAGGIAEMAL-----------------------HGFAIRSAAVVSLALFRAFVSQA------GIETVNLLTPKA 476 (602)
Q Consensus 426 yGPIaDNAGGIaEMs~-----------------------KGfAIGSAaL~alaLF~ay~~~~------~~~~v~l~~p~V 476 (602)
||||+||||||+||++ ||||||||+|+||+||++|++++ ....+||.||+|
T Consensus 432 yGPiaDNAgGIaEMs~l~~~VR~~td~LDa~GNTT~A~~KGfaIgSAaLaal~Lf~a~~~~~~~~~~~~~~~~~l~~p~v 511 (682)
T PF03030_consen 432 YGPIADNAGGIAEMSGLPEEVREITDALDAVGNTTKAIGKGFAIGSAALAALALFAAYVQEVSLFNGTSIQSVDLTNPYV 511 (682)
T ss_dssp HHHHHHHHHHHHHHCT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------T-S--BTTSHHH
T ss_pred cCcccccccchHHHcCCChhhhhhhHHHhhcCchhhhhhcchhhHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCccc
Confidence 9999999999999998 99999999999999999999998 567799999999
Q ss_pred HHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCCcccc-----ccccCCcchhhhcchhhHHHHhHHH
Q 040141 477 FVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQTTQLV-----SRFPLMPHPEKMIPQGALVILTPLI 551 (602)
Q Consensus 477 ~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg~~kP-----V~I~T~~AlkeMi~Pgllail~Pi~ 551 (602)
++|+|+|+|+|||||+++|+||||+|++|||||||||||+|||||||+|| |||+||+||||||+|+++++++|++
T Consensus 512 l~G~liG~~lpflfsa~~m~aVg~aA~~mV~EvRrQFre~pgi~eg~~~pdy~~cV~I~T~~alkemi~P~ll~v~~Pi~ 591 (682)
T PF03030_consen 512 LIGLLIGAMLPFLFSALTMKAVGRAAGKMVEEVRRQFREIPGIMEGKAKPDYARCVDISTRAALKEMILPGLLAVLAPIV 591 (682)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTTTSS---HHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCChHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHhhhcccccc----ceeeecccccccccccccchhhhhhcCCCccccccccccC
Q 040141 552 AGTLFGVETLA----GSLVSGVQFVQLFPFFFSPHVAISASNTGGAWDNAKKYIE 602 (602)
Q Consensus 552 vG~l~G~~al~----G~lvsG~~~~~~f~~f~~~~lAi~m~NaGGAWDNAKKyIE 602 (602)
+|++||+++++ |+++||++ ||+||+|+||||||||||||
T Consensus 592 vg~~~g~~al~G~L~g~~~sG~~------------~Ai~m~n~GGAWDNAKKyIE 634 (682)
T PF03030_consen 592 VGFLLGPEALGGLLMGATVSGIL------------LAIFMANAGGAWDNAKKYIE 634 (682)
T ss_dssp HHHHT-HHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHH------------HHHHHhccchHHHHHHHHHh
Confidence 99999999998 88899999 99999999999999999998
No 5
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=100.00 E-value=2.5e-174 Score=1422.90 Aligned_cols=498 Identities=43% Similarity=0.676 Sum_probs=467.6
Q ss_pred hHHHHHHHHHHHHhHhHhhhhhceehHHHHHHHHHHHHHHhhcccCCCCCCCCCccCCCcccccccchhhHHHHHHHHHH
Q 040141 65 AIKCAEIQNAISVGATSFLFPQYKYLSVVMGVFSTIIFLFQGSVKGFSTKHEPCTYNTGIMCKPALVNAIFSTIAFLLGA 144 (602)
Q Consensus 65 ~~~m~~Ia~~I~eGA~afL~~qYk~i~~~~~v~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~taiaFllGa 144 (602)
+||||||+++|||||++||+||||++++|.++++++++.+.. ....+|+++++|++|+
T Consensus 8 ~~~m~~Ia~~I~eGA~afl~rqyk~i~~~~i~~~~~l~~~~~----------------------~~~~~~~~~~~Fl~Ga 65 (666)
T PRK00733 8 TERMQEIAGAIQEGAMAYLKRQYKTIAIFGVVVAVLLFLPAG----------------------GLFLGWLTAVAFLVGA 65 (666)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------------hHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999865311 0124579999999999
Q ss_pred HHHHhhhhhhcchhhhhhhhhHHHHhcChhHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhhc
Q 040141 145 LTSTLSGFLGMKITTYANARTTLEARKGVSKAFITAFRARAVMGLLLAANCLLVLYVSINLFKLYYDDDWEGLYESITGY 224 (602)
Q Consensus 145 ~~S~laGyiGM~iAt~aN~Rta~AA~~~~~~al~vAfrgGaVmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~l~Gf 224 (602)
+||.++||+|||+|||+|+|||+|||+++++||++|||+|+||||+|+|++|+++.++|++|.... ++.+.+++++||
T Consensus 66 ~~S~laG~iGM~iat~aN~Rta~aA~~~~~~al~vafr~G~vmGl~vvgl~Llgl~~~~~~~~~~~--~~~~~~~~l~gf 143 (666)
T PRK00733 66 VFSALAGYIGMRVATRANVRTAQAARKGLGKALKVAFRGGAVMGLLVVGLGLLGVAGLYLVFGLGA--NPDDAPDALVGF 143 (666)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCHHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHhccc--cchhhhHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999986322 233567899999
Q ss_pred ccchhHHHHHHHhcCcccccchh----------------------hhhcccCCccccccccccchhhhHH----------
Q 040141 225 DLSGSSMALFGRVGGGIYTKAVD----------------------VIADNVGYNVGEIAGMGFDLFGSYA---------- 272 (602)
Q Consensus 225 g~GaS~iALFaRvGGGIyTKAAD----------------------vIADnVGDNVGD~AGmgADLFESy~---------- 272 (602)
+||||++|||+|||||||||||| ||||||||||||||||||||||||+
T Consensus 144 ~~GaS~iAlFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADlfESy~~sivaamilg 223 (666)
T PRK00733 144 GFGASLIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMGADLFESYAVTIVAAMVLG 223 (666)
T ss_pred hhhHHHHHHHHHhcccceecccccchhhhhhhhcCCCCCCCCCcchHHHhhcccchhhccccchHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 9999999999999999999999999
Q ss_pred -----------------HHHhhhhHhhhhhheeeeeeccccccchHHHHHHHHHHHHHHHHHHHHh--h-hh-------c
Q 040141 273 -----------------VILSMGIVVCMITTLFATDLFQIKSVSEIELSFKRQLLISTIFDDCWHC--H-LA-------S 325 (602)
Q Consensus 273 -----------------lisa~gi~~sii~~~~~~~~~~~~~~~~~~~aL~~g~~is~~l~~v~~~--~-~~-------~ 325 (602)
+++++|+++|+++++++ |.++++||+++||+|+++|+++++++++ . +. .
T Consensus 224 ~~~~~~~~~~~~v~~Pl~i~~~gii~Siig~~~v----~~~~~~~~~~aL~~g~~~s~~l~~v~~~~~~~~~l~~~~~~~ 299 (666)
T PRK00733 224 AAAADAAFGVAGVLFPLLIAAVGIIASIIGIFFV----RLGKGGNPMKALNRGLIVTAVLSIVLTYFATYWLLGDGADGF 299 (666)
T ss_pred hhccccccchhHHHHHHHHHHHHHHHHHHHHeeE----EeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 45667788888887654 5677789999999999999999999843 1 11 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhccCCcccc--ccccccCcCchhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHH---
Q 040141 326 NSRHLFFCVATGLWAGLVIVYTTEYYTSNAYSA--GLADSYKRGASTNVIFDLALGYKSVIIPIFAIAVAAYASFSL--- 400 (602)
Q Consensus 326 ~~~~~f~~~~~Gl~~g~li~~~TeYyTs~~y~P--~IA~as~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l--- 400 (602)
.+|++|+|+++|+++|++|+++||||||++||| +||++|+||||||||+||++||+||++|+++|++++++||++
T Consensus 300 ~~~~~f~~~~iGlv~g~li~~iTeYyTs~~~~PVr~IA~as~tG~aTnIi~Gla~Gm~St~~pvl~i~~ai~~sy~l~~~ 379 (666)
T PRK00733 300 TWLNLFGAVLIGLVVGALIGLITEYYTSTEYRPVKEIAEASRTGPATNIISGLAVGMESTALPVLVIVAAILGAYLLGMA 379 (666)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcHHHHHHHhCcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 478999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHHhhhhhhhhheeecccccccCcchhhhhhc-----------------------CcchhHHHHHHHHHH
Q 040141 401 -AAMYGIAVAALGMLSTIATRLTIDAYGPISGIAGGIAEMAL-----------------------HGFAIRSAAVVSLAL 456 (602)
Q Consensus 401 -~GlyGiAiAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~-----------------------KGfAIGSAaL~alaL 456 (602)
+|+||+++|++|||||+++++++|+||||+||||||+||++ ||||||||+|+||+|
T Consensus 380 ~~GlyGia~Aa~GMLst~g~~la~DayGPIaDNAgGIaEMs~l~~~VR~~tD~LDavGNTT~A~~KGfaIGSAaLaal~L 459 (666)
T PRK00733 380 GAGLYGIALAAVGMLSTAGIIVAVDAYGPITDNAGGIAEMAGLPPEVRKITDALDAVGNTTKAVTKGFAIGSAALAALAL 459 (666)
T ss_pred cccHHHHHHHHHHHHHHhHHHHhhheeeccccCccchHHHcCCChhHhhhChHhHhcccchhHhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHhhh-------CCceeecCCchhHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCCcccc---
Q 040141 457 FRAFVSQA-------GIETVNLLTPKAFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQTTQLV--- 526 (602)
Q Consensus 457 F~ay~~~~-------~~~~v~l~~p~V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg~~kP--- 526 (602)
|++|++++ +...+|+.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||+|||||||+||
T Consensus 460 f~ay~~~~~~~~~~~~~~~~~l~~p~vl~GlliG~~lpflFs~l~m~AVg~aA~~mV~EVRrQFre~pGi~eg~~kPdY~ 539 (666)
T PRK00733 460 FAAYIDELAGLLGGGGILSLDLSNPYVLVGLLIGGMLPFLFSALAMTAVGRAAGAMVEEVRRQFREIPGIMEGTAKPDYA 539 (666)
T ss_pred HHHHHHHHHhhhcccccceeecCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCChH
Confidence 99999987 56679999999999999999999999999999999999999999999999999999999999
Q ss_pred --ccccCCcchhhhcchhhHHHHhHHHHHhhhcccccc----ceeeecccccccccccccchhhhhhcCCCccccccccc
Q 040141 527 --SRFPLMPHPEKMIPQGALVILTPLIAGTLFGVETLA----GSLVSGVQFVQLFPFFFSPHVAISASNTGGAWDNAKKY 600 (602)
Q Consensus 527 --V~I~T~~AlkeMi~Pgllail~Pi~vG~l~G~~al~----G~lvsG~~~~~~f~~f~~~~lAi~m~NaGGAWDNAKKy 600 (602)
|||+||+||||||+|+++++++|+++|+++|+++++ |+++||++ ||+||+|+||||||||||
T Consensus 540 ~cV~I~T~~AlkeMi~P~ll~v~~Pi~vG~~lG~~al~G~L~G~~vsG~~------------lAi~m~NaGGAWDNAKKy 607 (666)
T PRK00733 540 RCVDISTKAALKEMILPGLLAVLAPIAVGFLLGPEALGGLLAGAIVTGLL------------LAIFMANAGGAWDNAKKY 607 (666)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH------------HHHHHcccchhHHHHHHH
Confidence 999999999999999999999999999999999998 88899999 999999999999999999
Q ss_pred cC
Q 040141 601 IE 602 (602)
Q Consensus 601 IE 602 (602)
||
T Consensus 608 IE 609 (666)
T PRK00733 608 IE 609 (666)
T ss_pred Hh
Confidence 99
No 6
>COG3808 OVP1 Inorganic pyrophosphatase [Energy production and conversion]
Probab=100.00 E-value=2e-173 Score=1370.87 Aligned_cols=526 Identities=39% Similarity=0.598 Sum_probs=488.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeccCCCCCCCCCchhhhHHhhhcCCcchhhhHHHHHHHHHHHHhHhHhhhhhc
Q 040141 8 HTQVLTPAAAFIGIGFALILWVLVSKVKISNGAGSNGDDDRLIEEEEAEEGVDSLEAAIKCAEIQNAISVGATSFLFPQY 87 (602)
Q Consensus 8 ~~~~~~~~~~~lgl~fa~~~~~~v~~~~~~~~~~~nG~~~~l~~~~e~~~G~~~~~v~~~m~~Ia~~I~eGA~afL~~qY 87 (602)
.+.++.+.+++++++||.|.+++|+|. |+ | |||||||+.+|||||++||.|||
T Consensus 4 ~~~~l~i~~gl~sv~~A~~~~~sVl~~-----------------~~----G------n~rm~eIa~aIreGA~ayL~rqy 56 (703)
T COG3808 4 SVLYLAIACGLLSVLYAAWAAKSVLRA-----------------DA----G------NERMKEIAAAIREGAMAYLARQY 56 (703)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------cC----C------cHHHHHHHHHHHHhHHHHHHhhh
Confidence 467888999999999999999999883 33 8 99999999999999999999999
Q ss_pred eehHHHHHHHHHHHHHHhhcccCCCCCCCCCccCCCcccccccchhhHHHHHHHHHHHHHHhhhhhhcchhhhhhhhhHH
Q 040141 88 KYLSVVMGVFSTIIFLFQGSVKGFSTKHEPCTYNTGIMCKPALVNAIFSTIAFLLGALTSTLSGFLGMKITTYANARTTL 167 (602)
Q Consensus 88 k~i~~~~~v~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~taiaFllGa~~S~laGyiGM~iAt~aN~Rta~ 167 (602)
|+|+++.+++++++.+++. .|.++++|++||+.|..|||+||+++||||+|||+
T Consensus 57 ~tiavv~ivva~ll~~~l~--------------------------~~~ta~~Fl~GAv~S~~AG~~GM~vstrAN~RtAq 110 (703)
T COG3808 57 KTIAVVGIVVAILLAWFLL--------------------------SWLTAIGFLLGAVLSAAAGFAGMHVSTRANVRTAQ 110 (703)
T ss_pred hHHHHHHHHHHHHHHHHHh--------------------------hhHHHHHHHHHHHHHhhhcccceeeeehhhhHHHH
Confidence 9999999999888876653 15899999999999999999999999999999999
Q ss_pred HHhcChhHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhccCCcc--hhhhhhhhhcccchhHHHHHHHhcCcccccc
Q 040141 168 EARKGVSKAFITAFRARAVMGLLLAANCLLVLYVSINLFKLYYDDDW--EGLYESITGYDLSGSSMALFGRVGGGIYTKA 245 (602)
Q Consensus 168 AA~~~~~~al~vAfrgGaVmGl~vvglgLl~l~~~~~~~~~~~~~~~--~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKA 245 (602)
||++++.++|++|||+|+||||+|+|++||++++.|+++....+.++ ....+.++||+||||++++|+|||||||||+
T Consensus 111 AAs~~l~~al~vaf~sGaV~Gl~VaGlaLlg~s~~ylv~~~~~g~~~~~~~~i~~lv~~gfGaSlIslFaRvGGGIfTKa 190 (703)
T COG3808 111 AASTGLGKALDVAFKSGAVMGLSVAGLALLGLSLYYLVLTSVLGHEPNLRIVIDSLVGLGFGASLISLFARVGGGIFTKA 190 (703)
T ss_pred HHHhhhhhhhhhhcccCcchhhHHHHHHHHHHHhhhheeecccCCCcccchhhhhhhhhccchHHHHHHHHhcCceecch
Confidence 99999999999999999999999999999999999999875444322 2346789999999999999999999999999
Q ss_pred hh----------------------hhhcccCCccccccccccchhhhHH----------------------------HHH
Q 040141 246 VD----------------------VIADNVGYNVGEIAGMGFDLFGSYA----------------------------VIL 275 (602)
Q Consensus 246 AD----------------------vIADnVGDNVGD~AGmgADLFESy~----------------------------lis 275 (602)
|| ||||||||||||||||+|||||||+ .++
T Consensus 191 ADvgaDLVGKVEagIPEDDPRNpatIADNVGDNVGD~AGM~ADLfEsYvvtvvAtm~Laai~f~~~~~~~~~ilyPl~i~ 270 (703)
T COG3808 191 ADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFESYVVTVVATMVLAAIFFLGTETIEAVILYPLAIC 270 (703)
T ss_pred hhcccccccccccCCCCCCCCCccccccccCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 99 9999999999999999999999999 234
Q ss_pred hhhhHhhhhhheeeeeeccccccchHHHHHHHHHHHHHHHHHHHHh---hh------------hcchhHHHHHHHHHHHH
Q 040141 276 SMGIVVCMITTLFATDLFQIKSVSEIELSFKRQLLISTIFDDCWHC---HL------------ASNSRHLFFCVATGLWA 340 (602)
Q Consensus 276 a~gi~~sii~~~~~~~~~~~~~~~~~~~aL~~g~~is~~l~~v~~~---~~------------~~~~~~~f~~~~~Gl~~ 340 (602)
+++|++||+ +++++|.+++++|+.+|++|+|.|.++++++++ .. ....+++|+|.++|++.
T Consensus 271 a~~i~~Si~----gtffVk~~~~~~i~~al~~gl~~t~~Lsvv~~~~~t~~l~g~~~~~v~g~~~~~~~lf~~~~~Glv~ 346 (703)
T COG3808 271 AVGIITSII----GTFFVKLGKSGSIMGALYKGLIATGILSVVALAFVTSFLLGGTIGTVAGMSIGAINLFFCGVIGLVV 346 (703)
T ss_pred HHHHHHHHH----hheEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhhHHHHHHHHHH
Confidence 444455555 455677889999999999999999999999843 11 12346799999999999
Q ss_pred HHHHHHhhhhccCCcccc--ccccccCcCchhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 040141 341 GLVIVYTTEYYTSNAYSA--GLADSYKRGASTNVIFDLALGYKSVIIPIFAIAVAAYASFSLAAMYGIAVAALGMLSTIA 418 (602)
Q Consensus 341 g~li~~~TeYyTs~~y~P--~IA~as~tG~ATnII~GlavGm~St~~Pvl~I~~ai~~sy~l~GlyGiAiAa~GMLst~g 418 (602)
+.+|+++||||||++||| +|||+|+|||+||||+||++|||||++|.++|.++|+.+|+++||||+|+|++|||++.|
T Consensus 347 ~~lIv~iTeyYT~t~~rPv~~ia~as~tG~~tnii~GlavgleSt~~P~iviv~gIi~~~~~~GLyG~AIAa~~ML~~ag 426 (703)
T COG3808 347 TALIVVITEYYTSTNYRPVNSIAQASVTGHGTNIIQGLAVGLESTALPAIVIVIGIIITYQLAGLYGTAIAAVGMLSTAG 426 (703)
T ss_pred HHHheeeeeeeccCCcchHHHHHHhhccCcchhhhhhhhhhhhhccccHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeecccccccCcchhhhhhc-----------------------CcchhHHHHHHHHHHHHHHHhhhCC---------
Q 040141 419 TRLTIDAYGPISGIAGGIAEMAL-----------------------HGFAIRSAAVVSLALFRAFVSQAGI--------- 466 (602)
Q Consensus 419 ~~la~DayGPIaDNAGGIaEMs~-----------------------KGfAIGSAaL~alaLF~ay~~~~~~--------- 466 (602)
++++.|+|||++||||||+||++ ||||||||+|+||+||++|.+++..
T Consensus 427 miva~DayGPVtDNAGGIaEMa~LppEVR~~TD~LDAVGNTTkAvtKGyAIGSA~l~AL~LFAaY~~~~~~~a~~g~~~~ 506 (703)
T COG3808 427 MIVALDAYGPVTDNAGGIAEMAGLPPEVRKITDALDAVGNTTKAVTKGYAIGSAALGALVLFAAYSFDLKYFAANGKPYP 506 (703)
T ss_pred eEEEeeccCCcccCccchHHHcCCCHHHHHhhHHHHhccchhhhhhcccchhHHHHHHHHHHHHHHHHhhhHHhcCCCCc
Confidence 99999999999999999999999 9999999999999999999887641
Q ss_pred -------ceeecCCchhHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCCcccc-----ccccCCcc
Q 040141 467 -------ETVNLLTPKAFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQTTQLV-----SRFPLMPH 534 (602)
Q Consensus 467 -------~~v~l~~p~V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg~~kP-----V~I~T~~A 534 (602)
..+|++||+|++|+++|+++||+||+++|.||||+|++|||||||||||+|||||||+|| |||.||+|
T Consensus 507 ~~~~~~~~~~dl~np~VvaGl~~G~~lpylFs~~tmtAVgrAA~~vV~EVRRQfRE~PGimegk~kPdY~R~Vdi~T~aA 586 (703)
T COG3808 507 YFADMGALSLDLSNPYVVAGLLLGGLLPYLFSGITMTAVGRAAMEVVEEVRRQFREIPGIMEGKAKPDYGRCVDILTKAA 586 (703)
T ss_pred ccccccceeeecCChHHHHHHHHhhHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhCCccccCCcCCchhHHHHHHHHHH
Confidence 249999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred hhhhcchhhHHHHhHHHHHhhhcccccc----ceeeecccccccccccccchhhhhhcCCCccccccccccC
Q 040141 535 PEKMIPQGALVILTPLIAGTLFGVETLA----GSLVSGVQFVQLFPFFFSPHVAISASNTGGAWDNAKKYIE 602 (602)
Q Consensus 535 lkeMi~Pgllail~Pi~vG~l~G~~al~----G~lvsG~~~~~~f~~f~~~~lAi~m~NaGGAWDNAKKyIE 602 (602)
||||+.|++++|++|+++|+++|+++|+ |.+++|++ +||+|+|+||||||||||||
T Consensus 587 l~eMi~P~llavl~Plvvgli~G~~aLgg~L~G~iv~G~~------------~Ai~m~n~GGAWDNAKK~iE 646 (703)
T COG3808 587 LKEMIIPGLLAVLAPLVVGLILGFAALGGLLLGVIVNGLF------------VAISMANGGGAWDNAKKYIE 646 (703)
T ss_pred HHHhcchhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhHH------------HHHhhccCCCcchhhhhhhh
Confidence 9999999999999999999999999999 88899999 99999999999999999998
No 7
>PRK11677 hypothetical protein; Provisional
Probab=51.25 E-value=14 Score=35.38 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCccc
Q 040141 331 FFCVATGLWAGLVIVYTTEYYTSNAYS 357 (602)
Q Consensus 331 f~~~~~Gl~~g~li~~~TeYyTs~~y~ 357 (602)
|.+.++|+++|++||++.-+||+.+.+
T Consensus 3 W~~a~i~livG~iiG~~~~R~~~~~~~ 29 (134)
T PRK11677 3 WEYALIGLVVGIIIGAVAMRFGNRKLR 29 (134)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccchhh
Confidence 577889999999999999999987753
No 8
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=48.27 E-value=2.7e+02 Score=27.02 Aligned_cols=21 Identities=29% Similarity=0.265 Sum_probs=13.0
Q ss_pred cCCcchhhhHHH---HHHHHHHHH
Q 040141 57 EGVDSLEAAIKC---AEIQNAISV 77 (602)
Q Consensus 57 ~G~~~~~v~~~m---~~Ia~~I~e 77 (602)
||..++|+-+++ +||++.|.+
T Consensus 39 ~G~sEeeii~~LG~P~~iA~~i~~ 62 (181)
T PF08006_consen 39 EGKSEEEIIAELGSPKEIAREILA 62 (181)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHH
Confidence 355555555554 677777764
No 9
>PF12331 DUF3636: Protein of unknown function (DUF3636) ; InterPro: IPR022093 This domain family is found in eukaryotes, and is approximately 160 amino acids in length.
Probab=34.86 E-value=20 Score=34.95 Aligned_cols=21 Identities=33% Similarity=0.653 Sum_probs=20.2
Q ss_pred HHhhhhhhhhheeeccccccc
Q 040141 411 LGMLSTIATRLTIDAYGPISG 431 (602)
Q Consensus 411 ~GMLst~g~~la~DayGPIaD 431 (602)
.+||..+....--|+||||.|
T Consensus 49 ~~mL~lL~TS~lp~S~GpI~~ 69 (149)
T PF12331_consen 49 ILMLNLLSTSVLPDSFGPITD 69 (149)
T ss_pred HHHHHHHHhccCCCCcCCCCC
Confidence 689999999999999999999
No 10
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.38 E-value=43 Score=32.29 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCcccc
Q 040141 329 HLFFCVATGLWAGLVIVYTTEYYTSNAYSA 358 (602)
Q Consensus 329 ~~f~~~~~Gl~~g~li~~~TeYyTs~~y~P 358 (602)
-.|....+|+++|++||++--.+|..++|.
T Consensus 6 ~~W~~a~igLvvGi~IG~li~Rlt~~~~k~ 35 (138)
T COG3105 6 MTWEYALIGLVVGIIIGALIARLTNRKLKQ 35 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhhhh
Confidence 367899999999999999999999888776
No 11
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=31.19 E-value=2.5e+02 Score=28.74 Aligned_cols=24 Identities=21% Similarity=0.227 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhcch
Q 040141 134 IFSTIAFLLGALTSTLSGFLGMKI 157 (602)
Q Consensus 134 ~~taiaFllGa~~S~laGyiGM~i 157 (602)
.+..+.|++..+.....+..-.+.
T Consensus 132 l~~~i~~~v~~i~~i~~~~~~~K~ 155 (248)
T PF11368_consen 132 LFIIIPFLVLLILTIILQKFLRKT 155 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888888888888887766
No 12
>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development. The name derives from the first 2 members of the family to be discovered: int-1 (mouse) and wingless (Drosophila) []. It is now recognised that Wnt signalling controls many cell fate decisions in a variety of different organisms, including mammals []. Wnt signalling has been implicated in tumourigenesis, early mesodermal patterning of the embryo, morphogenesis of the brain and kidneys, regulation of mammary gland proliferation and Alzheimer's disease [, ]. Wnt-mediated signalling is believed to proceed initially through binding to cell surface receptors of the frizzled family; the signal is subsequently transduced through several cytoplasmic components to B-catenin, which enters the nucleus and activates the transcription of several genes important in development []. Several non-canonical Wnt signalling pathways have also been elucidated that act independently of B-catenin. Canonical and noncanonical Wnt signaling branches are highly interconnected, and cross-regulate each other []. Members of the Wnt gene family are defined by their sequence similarity to mouse Wnt-1 and Wingless in Drosophila. They encode proteins of ~350-400 residues in length, with orthologues identified in several, mostly vertebrate, species. Very little is known about the structure of Wnts as they are notoriously insoluble, but they share the following features characteristics of secretory proteins: a signal peptide, several potential N-glycosylation sites and 22 conserved cysteines [] that are probably involved in disulphide bonds. The Wnt proteins seem to adhere to the plasma membrane of the secreting cells and are therefore likely to signal over only few cell diameters. Fifteen major Wnt gene families have been identified in vertebrates, with multiple subtypes within some classes. In humans, 19 Wnt proteins have been identified that share 27% to 83% amino-acid sequence identity and a conserved pattern of 23 or 24 cysteine residues []. Wnt genes are highly conserved between vertebrate species sharing overall sequence identity and gene structure, and are slightly less conserved between vertebrates and invertebrates.; GO: 0005102 receptor binding, 0007275 multicellular organismal development, 0016055 Wnt receptor signaling pathway, 0005576 extracellular region; PDB: 4F0A_B.
Probab=31.14 E-value=46 Score=35.66 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHHHHHHhhccc
Q 040141 494 TMKSVGSIALKMVEEVRRHFNT 515 (602)
Q Consensus 494 tm~AVg~aA~~mVeEVRRQFre 515 (602)
+|.+|.+++..-++|+++|||.
T Consensus 22 ~m~~i~~G~~~ai~ECq~QF~~ 43 (310)
T PF00110_consen 22 LMPSIAEGAKMAIEECQHQFRN 43 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999995
No 13
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=28.92 E-value=58 Score=27.79 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=24.7
Q ss_pred hHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 040141 476 AFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQ 521 (602)
Q Consensus 476 V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~e 521 (602)
+++++++|+.+-|+++=. -.++|++|+|-|-|
T Consensus 3 iilali~G~~~Gff~ar~--------------~~~k~l~~NPpine 34 (64)
T PF03672_consen 3 IILALIVGAVIGFFIARK--------------YMEKQLKENPPINE 34 (64)
T ss_pred HHHHHHHHHHHHHHHHHH--------------HHHHHHHHCCCCCH
Confidence 577888888888887543 45689999998765
No 14
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.80 E-value=74 Score=29.94 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccC
Q 040141 329 HLFFCVATGLWAGLVIVYTTEYYTS 353 (602)
Q Consensus 329 ~~f~~~~~Gl~~g~li~~~TeYyTs 353 (602)
.+-.=.+.|+++|+.|||++++|-.
T Consensus 47 klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 47 KLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3444445566666666666666643
No 15
>PF14236 DUF4338: Domain of unknown function (DUF4338)
Probab=26.28 E-value=44 Score=35.88 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=43.1
Q ss_pred HhhhhHHHHH-HHHhHHHHHHHHHHHHHHHHhhcccCCCCCCCcccc---ccccCCcc
Q 040141 481 IVGAMLPCWF-SSTTMKSVGSIALKMVEEVRRHFNTIPGQNQTTQLV---SRFPLMPH 534 (602)
Q Consensus 481 liGamlpflF-sa~tm~AVg~aA~~mVeEVRRQFreipGi~eg~~kP---V~I~T~~A 534 (602)
++||.+||.. -+....+...++.++.++=|++.+..|.++|.+.|| |-|-|..+
T Consensus 137 ~lGAi~Py~~llggkl~al~~~s~~v~~d~~~~Y~~~~~liet~~~~~~L~fv~t~s~ 194 (296)
T PF14236_consen 137 FLGAIPPYNQLLGGKLVALLLASREVRDDWRRRYGHRPTLIETRSKPARLVFVTTTSA 194 (296)
T ss_pred EecccCchhhhcchHHHHHHHhhHHHHHHHHHHhCCCcEEEeecccCCceEEEecccc
Confidence 4689999864 356677778888899999999999999999998888 66666543
No 16
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=25.27 E-value=4e+02 Score=25.92 Aligned_cols=34 Identities=9% Similarity=-0.022 Sum_probs=23.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhheeccCC
Q 040141 6 EGHTQVLTPAAAFIGIGFALILWVLVSKVKISNG 39 (602)
Q Consensus 6 ~~~~~~~~~~~~~lgl~fa~~~~~~v~~~~~~~~ 39 (602)
|++-..-..+.+.+++..+.|+...-||+...|+
T Consensus 34 E~~Gt~aL~ls~~l~~mig~yl~~~~rr~~~rPE 67 (137)
T PF12270_consen 34 EWVGTVALVLSGGLALMIGFYLRFTARRIGPRPE 67 (137)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 3344444566788899999999988888765443
No 17
>smart00097 WNT1 found in Wnt-1.
Probab=25.24 E-value=63 Score=34.71 Aligned_cols=22 Identities=32% Similarity=0.323 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHHHHHhhccc
Q 040141 494 TMKSVGSIALKMVEEVRRHFNT 515 (602)
Q Consensus 494 tm~AVg~aA~~mVeEVRRQFre 515 (602)
.|.+|.+++..-++|+++|||.
T Consensus 19 ~~~~v~~g~~~ai~ECq~QF~~ 40 (305)
T smart00097 19 VMISVAEGAQEGIEECQHQFRF 40 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999995
No 18
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=24.76 E-value=6.4e+02 Score=26.94 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=49.8
Q ss_pred HHHhhhhHhhhhhheeeeeeccccccc--hHHHHHHHHHHHHHHHHHHHHhh-----h--hcchhHHHHHHHHHHHHHHH
Q 040141 273 VILSMGIVVCMITTLFATDLFQIKSVS--EIELSFKRQLLISTIFDDCWHCH-----L--ASNSRHLFFCVATGLWAGLV 343 (602)
Q Consensus 273 lisa~gi~~sii~~~~~~~~~~~~~~~--~~~~aL~~g~~is~~l~~v~~~~-----~--~~~~~~~f~~~~~Gl~~g~l 343 (602)
+++.++++.-+++..+... +.++++ +-.+..++++.. .+++.+++.. . ..+.|..++-=.+|++.+.+
T Consensus 104 ~~G~~Al~liiiGv~lts~--~~~~~~~~~~~~~~~kgi~~-Ll~stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~ 180 (269)
T PF06800_consen 104 IIGFLALVLIIIGVILTSY--QDKKSDKSSSKSNMKKGILA-LLISTIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAF 180 (269)
T ss_pred HHHHHHHHHHHHHHHHhcc--ccccccccccccchhhHHHH-HHHHHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHH
Confidence 3344455555555544322 222222 123566777663 5556666431 1 23467888899999998655
Q ss_pred HHHhhhhccCCccccccccccCcCchhHHHhhhhhhh
Q 040141 344 IVYTTEYYTSNAYSAGLADSYKRGASTNVIFDLALGY 380 (602)
Q Consensus 344 i~~~TeYyTs~~y~P~IA~as~tG~ATnII~GlavGm 380 (602)
+--.-+ ++|.-.+ -+.-|+++|+--+.
T Consensus 181 i~~~~~------~~~~~~k----~~~~nil~G~~w~i 207 (269)
T PF06800_consen 181 IFNLFS------KKPFFEK----KSWKNILTGLIWGI 207 (269)
T ss_pred HHhhcc------ccccccc----chHHhhHHHHHHHH
Confidence 443322 1220011 14789999986554
No 19
>PF00957 Synaptobrevin: Synaptobrevin; InterPro: IPR001388 Synaptobrevin is an intrinsic membrane protein of small synaptic vesicles [], specialised secretory organelles of neurons that actively accumulate neurotransmitters and participate in their calcium-dependent release by exocytosis. Vesicle function is mediated by proteins in their membranes, although the precise nature of the protein-protein interactions underlying this are still uncertain []. Synaptobrevin may play a role in the molecular events underlying neurotransmitter release and vesicle recycling and may be involved in the regulation of membrane flow in the nerve terminal, a process mediated by interaction with low molecular weight GTP-binding proteins []. Synaptic vesicle-associated membrane proteins (VAMPs) from Torpedo californica (Pacific electric ray) and SNC1 from yeast are related to synaptobrevin.; GO: 0016192 vesicle-mediated transport, 0016021 integral to membrane; PDB: 3EGX_C 2NUP_C 3EGD_C 2NUT_C 1IOU_A 1H8M_A 3B5N_A 3ZYM_A 2NPS_A 1SFC_E ....
Probab=23.81 E-value=1.9e+02 Score=24.89 Aligned_cols=39 Identities=13% Similarity=0.281 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHhHh----HhhhhhceehHHHHHHHHHHHHH
Q 040141 65 AIKCAEIQNAISVGAT----SFLFPQYKYLSVVMGVFSTIIFL 103 (602)
Q Consensus 65 ~~~m~~Ia~~I~eGA~----afL~~qYk~i~~~~~v~~~ll~~ 103 (602)
+++|++-|+..+..|. .+..+.||+..++..++.+++++
T Consensus 40 t~~L~~~a~~F~k~a~~l~r~~~~~~~k~~~i~~~iv~~~~~~ 82 (89)
T PF00957_consen 40 TEELSDNAKQFKKNAKKLKRKMWWRNYKLYIIIIIIVIIIILI 82 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhhhhhH
Confidence 5666666666666665 35667888877777666665544
No 20
>PRK01844 hypothetical protein; Provisional
Probab=22.86 E-value=86 Score=27.37 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=24.5
Q ss_pred hHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 040141 476 AFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQT 522 (602)
Q Consensus 476 V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg 522 (602)
+++++++|+..-|+++= +-.++|+||+|-|-|-
T Consensus 10 ~I~~li~G~~~Gff~ar--------------k~~~k~lk~NPpine~ 42 (72)
T PRK01844 10 GVVALVAGVALGFFIAR--------------KYMMNYLQKNPPINEQ 42 (72)
T ss_pred HHHHHHHHHHHHHHHHH--------------HHHHHHHHHCCCCCHH
Confidence 46678888888887753 3456999999988663
No 21
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=22.76 E-value=3.5e+02 Score=30.91 Aligned_cols=29 Identities=28% Similarity=0.394 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhcchhhhhhh
Q 040141 135 FSTIAFLLGALTSTLSGFLGMKITTYANA 163 (602)
Q Consensus 135 ~taiaFllGa~~S~laGyiGM~iAt~aN~ 163 (602)
.....+++=+++|.++||++++.--.-+-
T Consensus 298 l~t~~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 298 LLTAAIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 55566777789999999999987644433
No 22
>COG1288 Predicted membrane protein [Function unknown]
Probab=21.06 E-value=6.2e+02 Score=29.28 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhHhHhhhhhceehHHHHHHHHHHHH
Q 040141 67 KCAEIQNAISVGATSFLFPQYKYLSVVMGVFSTIIF 102 (602)
Q Consensus 67 ~m~~Ia~~I~eGA~afL~~qYk~i~~~~~v~~~ll~ 102 (602)
+-||-.+.-+++...|=.|+--.+.+|..-+...+|
T Consensus 256 e~r~~f~~~~~~~~~Ft~~~klvL~lf~l~f~~mI~ 291 (481)
T COG1288 256 EFRETFKVEDSGERPFTFRDKLVLLLFTLTFVIMIW 291 (481)
T ss_pred HHHHHhhhccccccccchhhhHHHHHHHHHHHHHHH
Confidence 333434444555667878877777777766665555
No 23
>PRK00523 hypothetical protein; Provisional
Probab=20.37 E-value=1.1e+02 Score=26.86 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=23.1
Q ss_pred hHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 040141 476 AFVGLIVGAMLPCWFSSTTMKSVGSIALKMVEEVRRHFNTIPGQNQT 522 (602)
Q Consensus 476 V~~GlliGamlpflFsa~tm~AVg~aA~~mVeEVRRQFreipGi~eg 522 (602)
+++++++|+..-|+++= +-.++|++|+|-|-|-
T Consensus 11 ~i~~li~G~~~Gffiar--------------k~~~k~l~~NPpine~ 43 (72)
T PRK00523 11 GIPLLIVGGIIGYFVSK--------------KMFKKQIRENPPITEN 43 (72)
T ss_pred HHHHHHHHHHHHHHHHH--------------HHHHHHHHHCcCCCHH
Confidence 35567777777777653 4456999999988663
Done!