Your job contains 1 sequence.
>040148
MDRGNCSPRYMRCTIGQQYDNPLSKKFNDVVNEMRRERCSYLRPRSCQEGDLSGMFSSKM
IEDKNPNGPSYFEFLVQIHREIQKKPSL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040148
(88 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100202 - symbol:CEF "AT3G44340" species:3702 ... 221 1.2e-21 2
UNIPROTKB|F1SU53 - symbol:SEC24C "Uncharacterized protein... 107 1.3e-08 2
ZFIN|ZDB-GENE-070117-2501 - symbol:sec24d "SEC24 family, ... 102 3.8e-08 2
FB|FBgn0262126 - symbol:gho "ghost" species:7227 "Drosoph... 105 1.1e-06 2
UNIPROTKB|B4DZT4 - symbol:SEC24C "cDNA FLJ60379, highly s... 117 1.6e-06 1
ZFIN|ZDB-GENE-030131-4487 - symbol:sec24c "SEC24 family, ... 119 5.9e-06 1
UNIPROTKB|E7EP00 - symbol:SEC24C "Protein transport prote... 117 7.2e-06 1
UNIPROTKB|P53992 - symbol:SEC24C "Protein transport prote... 117 8.3e-06 1
UNIPROTKB|E2RE90 - symbol:SEC24C "Uncharacterized protein... 117 8.3e-06 1
UNIPROTKB|J9JHK6 - symbol:SEC24C "Uncharacterized protein... 117 8.5e-06 1
RGD|1597739 - symbol:Sec24c "SEC24 family, member C (S. c... 116 9.8e-06 1
POMBASE|SPAC22F8.08 - symbol:sec24 "COPII cargo receptor ... 88 3.7e-05 2
ZFIN|ZDB-GENE-060526-224 - symbol:si:dkey-174n20.3 "si:dk... 68 5.2e-05 2
UNIPROTKB|E1BIU0 - symbol:SEC24C "Uncharacterized protein... 107 9.6e-05 1
UNIPROTKB|E2RSG8 - symbol:SEC24D "Uncharacterized protein... 66 0.00020 2
UNIPROTKB|E1BUD8 - symbol:SEC24C "Uncharacterized protein... 104 0.00021 1
UNIPROTKB|O94855 - symbol:SEC24D "Protein transport prote... 67 0.00041 2
>TAIR|locus:2100202 [details] [associations]
symbol:CEF "AT3G44340" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR006895
InterPro:IPR006896 InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811
Pfam:PF04815 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006886 GO:GO:0000139 GO:GO:0006979 GO:GO:0005789
GO:GO:0008270 InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888
EMBL:AL138641 GO:GO:0033116 GO:GO:0030127 SUPFAM:SSF82919
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811 eggNOG:COG5028
HOGENOM:HOG000196365 KO:K14007 EMBL:AJ251579 IPI:IPI00541098
PIR:T47424 RefSeq:NP_566869.1 UniGene:At.22773
ProteinModelPortal:Q9M291 STRING:Q9M291 PaxDb:Q9M291 PRIDE:Q9M291
ProMEX:Q9M291 GeneID:823559 KEGG:ath:AT3G44340 TAIR:At3g44340
InParanoid:Q9M291 OMA:NSMMPGP Genevestigator:Q9M291 Uniprot:Q9M291
Length = 1096
Score = 221 (82.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 42/71 (59%), Positives = 55/71 (77%)
Query: 17 QQYDNPLSKKFNDVVNEMRRERCSYLRPRSCQEGDLSG--MFSSKMIEDKNPNGPSYFEF 74
Q+YDN LSKKFNDVVNE+RR+R SYLR + C++GD +G +F S M+ED+ G SY +F
Sbjct: 1024 QKYDNQLSKKFNDVVNEIRRQRSSYLRIKLCKKGDPAGNMLFQSYMVEDRGSGGASYVDF 1083
Query: 75 LVQIHREIQKK 85
LV +HR+IQ K
Sbjct: 1084 LVSVHRQIQHK 1094
Score = 72 (30.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 2 DRGNCSPRYMRCTIGQ 17
D GN SPRYMRCTI Q
Sbjct: 373 DTGNSSPRYMRCTINQ 388
>UNIPROTKB|F1SU53 [details] [associations]
symbol:SEC24C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
GO:GO:0005634 GO:GO:0006886 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0030127 SUPFAM:SSF82919
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
GeneTree:ENSGT00590000082962 OMA:AQGHPGI EMBL:CT827821
Ensembl:ENSSSCT00000011279 Uniprot:F1SU53
Length = 1086
Score = 107 (42.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DN LSKK +++ +R +R Y++ QE L +F ++EDK+ G SY +FL
Sbjct: 1017 DNLLSKKVRGLIDNLRAQRSRYMKLIVVKQEDKLEMLFKHFLVEDKSLSGGASYVDFLCH 1076
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1077 MHKEIRQ 1083
Score = 62 (26.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 2 DRGNCSPRYMRCT 14
D+GN SPRY+RCT
Sbjct: 366 DQGNASPRYIRCT 378
>ZFIN|ZDB-GENE-070117-2501 [details] [associations]
symbol:sec24d "SEC24 family, member D (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0030127 "COPII vesicle
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0070278 "extracellular matrix
constituent secretion" evidence=IMP] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0060536 "cartilage
morphogenesis" evidence=IMP] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
ZFIN:ZDB-GENE-070117-2501 GO:GO:0006886 GO:GO:0008270
InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888 GO:GO:0048703
GO:GO:0060536 GO:GO:0030127 GO:GO:0070278 InterPro:IPR012990
Pfam:PF08033 SUPFAM:SSF81811 GeneTree:ENSGT00590000082962
EMBL:CABZ01087345 EMBL:CABZ01087346 EMBL:CABZ01112895
EMBL:CABZ01112896 EMBL:CABZ01117105 EMBL:CABZ01117106
IPI:IPI00968580 Ensembl:ENSDART00000058763 Bgee:F1R3A4
Uniprot:F1R3A4
Length = 1029
Score = 102 (41.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSCQEGDLSGM-FSSKMIEDKNPNG-PSYFEFLVQ 77
DNP S+K + +++ + ++R + ++ ++ D + M F ++EDK +G SY +FL
Sbjct: 960 DNPHSRKLHSIISRISQQRAASMKLLIVKQKDRAEMSFRQLLVEDKGLHGGASYMDFLCF 1019
Query: 78 IHREIQK 84
+HREI++
Sbjct: 1020 VHREIRQ 1026
Score = 62 (26.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 2 DRGNCSPRYMRCT 14
D+GN SPR+MRCT
Sbjct: 300 DQGNASPRFMRCT 312
>FB|FBgn0262126 [details] [associations]
symbol:gho "ghost" species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IDA] [GO:0035158 "regulation of tube diameter, open
tracheal system" evidence=IMP] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0070971 "endoplasmic reticulum exit site"
evidence=IDA] [GO:0003331 "positive regulation of extracellular
matrix constituent secretion" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0048081
"positive regulation of cuticle pigmentation" evidence=IMP]
[GO:0030011 "maintenance of cell polarity" evidence=IMP]
[GO:0007030 "Golgi organization" evidence=IMP] [GO:0016203 "muscle
attachment" evidence=IMP] [GO:0035149 "lumen formation, open
tracheal system" evidence=IMP] [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0040003 "chitin-based cuticle
development" evidence=IMP] [GO:0022409 "positive regulation of
cell-cell adhesion" evidence=IMP] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0000902 "cell morphogenesis" evidence=IMP]
InterPro:IPR006895 InterPro:IPR006896 InterPro:IPR006900
Pfam:PF04810 Pfam:PF04811 Pfam:PF04815 GO:GO:0006886 EMBL:AE014134
GO:GO:0008360 GO:GO:0005811 GO:GO:0008270 GO:GO:0009306
GO:GO:0016787 GO:GO:0016203 GO:GO:0000902 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0040003 GO:GO:0034394
GO:GO:0003331 GO:GO:0071711 GO:GO:0007030 GO:GO:0007029
GO:GO:0030011 GO:GO:0035158 GO:GO:0022409 GO:GO:0035149
GO:GO:0030127 SUPFAM:SSF82919 GO:GO:0070971 InterPro:IPR012990
Pfam:PF08033 SUPFAM:SSF81811 eggNOG:COG5028 KO:K14007
GeneTree:ENSGT00590000082962 HSSP:P40482 OMA:QDQGNCN GO:GO:0048081
EMBL:AY052042 RefSeq:NP_608664.2 UniGene:Dm.269 SMR:Q9VQ94
IntAct:Q9VQ94 MINT:MINT-283494 STRING:Q9VQ94
EnsemblMetazoa:FBtr0077810 EnsemblMetazoa:FBtr0329964 GeneID:33409
KEGG:dme:Dmel_CG10882 UCSC:CG10882-RA CTD:33409 FlyBase:FBgn0262126
InParanoid:Q9VQ94 OrthoDB:EOG4CVDNW GenomeRNAi:33409 NextBio:783418
Uniprot:Q9VQ94
Length = 1193
Score = 105 (42.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/66 (30%), Positives = 41/66 (62%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSCQEGD-LSGMFSSKMIEDKNPNGP-SYFEFLVQ 77
+ PL+K+ + ++ ++ +ER Y+R ++ D L +F ++ED+ +G SY +FL
Sbjct: 1124 ETPLAKRIHGILEQIMKERSRYMRITWLRQNDKLESVFRHFLVEDRGTDGSASYVDFLCH 1183
Query: 78 IHREIQ 83
+H+EI+
Sbjct: 1184 MHKEIK 1189
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 2 DRGNCSPRYMRCTI 15
D+GN SPR++R ++
Sbjct: 465 DQGNSSPRFLRSSL 478
>UNIPROTKB|B4DZT4 [details] [associations]
symbol:SEC24C "cDNA FLJ60379, highly similar to Protein
transport protein Sec24C" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR006900
Pfam:PF04815 GO:GO:0043231 GO:GO:0006886 InterPro:IPR007123
Pfam:PF00626 EMBL:AC022400 GO:GO:0006888 GO:GO:0030127
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811 UniGene:Hs.81964
HGNC:HGNC:10705 HOVERGEN:HBG062229 ChiTaRS:SEC24C EMBL:AK303085
IPI:IPI01011290 SMR:B4DZT4 STRING:B4DZT4 Ensembl:ENST00000535742
Ensembl:ENST00000540668 UCSC:uc010qkp.2 Uniprot:B4DZT4
Length = 342
Score = 117 (46.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DNPLSKK +++ +R +R Y++ QE + +F ++EDK+ G SY +FL
Sbjct: 273 DNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVDFLCH 332
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 333 MHKEIRQ 339
>ZFIN|ZDB-GENE-030131-4487 [details] [associations]
symbol:sec24c "SEC24 family, member C (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0030127 "COPII vesicle
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
ZFIN:ZDB-GENE-030131-4487 GO:GO:0006886 GO:GO:0008270
InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888 GO:GO:0030127
SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
GeneTree:ENSGT00590000082962 EMBL:CU469520 EMBL:CU694198
IPI:IPI00972073 Ensembl:ENSDART00000085476 ArrayExpress:F1R9P2
Bgee:F1R9P2 Uniprot:F1R9P2
Length = 1241
Score = 119 (46.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKNPNG-PSYFEFLVQ 77
DNP SK+ +++ +R +R Y++ QE L +F ++EDK+ NG SY +FL
Sbjct: 1172 DNPFSKRLKEIIESIRAQRSRYMKLMVVKQEDKLELIFKHFLVEDKSNNGGASYVDFLCH 1231
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1232 MHKEIRQ 1238
>UNIPROTKB|E7EP00 [details] [associations]
symbol:SEC24C "Protein transport protein Sec24C"
species:9606 "Homo sapiens" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
GO:GO:0005634 GO:GO:0006886 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 EMBL:AC022400 GO:GO:0006888 GO:GO:0030127
SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
HGNC:HGNC:10705 ChiTaRS:SEC24C IPI:IPI01015489
ProteinModelPortal:E7EP00 SMR:E7EP00 Ensembl:ENST00000411652
UCSC:uc010qko.2 ArrayExpress:E7EP00 Bgee:E7EP00 Uniprot:E7EP00
Length = 975
Score = 117 (46.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DNPLSKK +++ +R +R Y++ QE + +F ++EDK+ G SY +FL
Sbjct: 906 DNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVDFLCH 965
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 966 MHKEIRQ 972
>UNIPROTKB|P53992 [details] [associations]
symbol:SEC24C "Protein transport protein Sec24C"
species:9606 "Homo sapiens" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS;TAS] [GO:0030127 "COPII vesicle coat" evidence=NAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] [GO:0002474 "antigen processing and
presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=TAS] [GO:0016044 "cellular
membrane organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_11123
Reactome:REACT_17015 Reactome:REACT_111217 InterPro:IPR006895
InterPro:IPR006896 InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811
Pfam:PF04815 GO:GO:0005829 GO:GO:0005634 GO:GO:0048471
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0000139 GO:GO:0002474
GO:GO:0019886 GO:GO:0005789 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 GO:GO:0043687 GO:GO:0018279 GO:GO:0030127
SUPFAM:SSF82919 GO:GO:0048208 Reactome:REACT_147890
Reactome:REACT_147893 InterPro:IPR012990 Pfam:PF08033
SUPFAM:SSF81811 eggNOG:COG5028 HOGENOM:HOG000196365 KO:K14007
EMBL:D38555 EMBL:BC018928 IPI:IPI00024661 RefSeq:NP_004913.2
RefSeq:NP_940999.1 UniGene:Hs.81964 PDB:3EH2 PDBsum:3EH2
ProteinModelPortal:P53992 SMR:P53992 DIP:DIP-30981N IntAct:P53992
MINT:MINT-4998997 STRING:P53992 PhosphoSite:P53992 DMDM:257051070
PaxDb:P53992 PRIDE:P53992 DNASU:9632 Ensembl:ENST00000339365
Ensembl:ENST00000345254 GeneID:9632 KEGG:hsa:9632 UCSC:uc001juw.3
CTD:9632 GeneCards:GC10P075504 H-InvDB:HIX0008930 HGNC:HGNC:10705
HPA:HPA040196 HPA:HPA040213 MIM:607185 neXtProt:NX_P53992
PharmGKB:PA35628 HOVERGEN:HBG062229 InParanoid:P53992 OMA:AQGHPGI
OrthoDB:EOG4D7Z52 PhylomeDB:P53992 ChiTaRS:SEC24C
EvolutionaryTrace:P53992 GenomeRNAi:9632 NextBio:36149
ArrayExpress:P53992 Bgee:P53992 CleanEx:HS_SEC24C
Genevestigator:P53992 GermOnline:ENSG00000176986 Uniprot:P53992
Length = 1094
Score = 117 (46.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DNPLSKK +++ +R +R Y++ QE + +F ++EDK+ G SY +FL
Sbjct: 1025 DNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVDFLCH 1084
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1085 MHKEIRQ 1091
>UNIPROTKB|E2RE90 [details] [associations]
symbol:SEC24C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0030127
"COPII vesicle coat" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
GO:GO:0005634 GO:GO:0006886 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0030127 SUPFAM:SSF82919
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811 KO:K14007
GeneTree:ENSGT00590000082962 EMBL:AAEX03002831
RefSeq:XP_003639043.1 RefSeq:XP_003639044.1
ProteinModelPortal:E2RE90 Ensembl:ENSCAFT00000023604
GeneID:100855957 KEGG:cfa:100855957 NextBio:20898333 Uniprot:E2RE90
Length = 1096
Score = 117 (46.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DNPLSKK +++ +R +R Y++ QE L +F ++EDK+ G SY +FL
Sbjct: 1027 DNPLSKKVRGLIDSLRAQRSRYMKLIVVKQEDKLEMLFKHFLVEDKSLSGGASYVDFLCH 1086
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1087 MHKEIRQ 1093
>UNIPROTKB|J9JHK6 [details] [associations]
symbol:SEC24C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR006895
InterPro:IPR006896 InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811
Pfam:PF04815 GO:GO:0006886 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0030127 SUPFAM:SSF82919
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
GeneTree:ENSGT00590000082962 OMA:AQGHPGI EMBL:AAEX03002831
Ensembl:ENSCAFT00000045355 Uniprot:J9JHK6
Length = 1119
Score = 117 (46.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DNPLSKK +++ +R +R Y++ QE L +F ++EDK+ G SY +FL
Sbjct: 1050 DNPLSKKVRGLIDSLRAQRSRYMKLIVVKQEDKLEMLFKHFLVEDKSLSGGASYVDFLCH 1109
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1110 MHKEIRQ 1116
>RGD|1597739 [details] [associations]
symbol:Sec24c "SEC24 family, member C (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030127 "COPII vesicle coat" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR006895
InterPro:IPR006896 InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811
Pfam:PF04815 RGD:1597739 GO:GO:0006886 GO:GO:0008270
InterPro:IPR007123 Pfam:PF00626 GO:GO:0006888 GO:GO:0030127
SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
IPI:IPI00388782 Ensembl:ENSRNOT00000033162 UCSC:RGD:1597739
ArrayExpress:F1LYY0 Uniprot:F1LYY0
Length = 1027
Score = 116 (45.9 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DNPLSKK +++ +R +R Y++ QE L +F ++EDK+ G SY +FL
Sbjct: 958 DNPLSKKVRGLIDTLRAQRTRYMKLIVVKQEDKLEMLFKHFLVEDKSLSGGASYVDFLCH 1017
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1018 MHKEIRQ 1024
>POMBASE|SPAC22F8.08 [details] [associations]
symbol:sec24 "COPII cargo receptor Sec24/Sfb2 subunit"
species:4896 "Schizosaccharomyces pombe" [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006914 "autophagy" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030127 "COPII vesicle coat"
evidence=ISO] [GO:0070971 "endoplasmic reticulum exit site"
evidence=IDA] [GO:0090110 "cargo loading into COPII-coated vesicle"
evidence=ISO] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
PomBase:SPAC22F8.08 GO:GO:0005829 GO:GO:0006886 GO:GO:0000139
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 GO:GO:0006914 InterPro:IPR007123 Pfam:PF00626
GO:GO:0030127 SUPFAM:SSF82919 GO:GO:0090110 GO:GO:0070971
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811 eggNOG:COG5028
HOGENOM:HOG000196365 KO:K14007 OMA:PGYQNTS OrthoDB:EOG47Q1F9
EMBL:D89149 PIR:T38198 PIR:T42425 RefSeq:NP_594731.1
ProteinModelPortal:Q9UUI5 STRING:Q9UUI5 EnsemblFungi:SPAC22F8.08.1
GeneID:2541601 KEGG:spo:SPAC22F8.08 NextBio:20802695 Uniprot:Q9UUI5
Length = 926
Score = 88 (36.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 20 DNPLSKKFNDVVNEMRR-ERCSYLRPRSCQ---EGD--LSGMFSSKMIEDKNPNGPSYFE 73
DNPL+ + N ++ ++R ++ S + P +GD L F S +ED++ N PSY +
Sbjct: 856 DNPLNVRINAILGKLRSLDKGSTIMPSLYLVRGDGDPQLRSWFFSHFVEDRSENSPSYLQ 915
Query: 74 FLVQIHREIQ 83
FL + +++
Sbjct: 916 FLQTLKEKVR 925
Score = 46 (21.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 5 NCSPRYMRCTIG-QQYDNPLSKK 26
NC P+Y+R TI N L KK
Sbjct: 201 NCPPKYVRSTINCVPTTNSLLKK 223
>ZFIN|ZDB-GENE-060526-224 [details] [associations]
symbol:si:dkey-174n20.3 "si:dkey-174n20.3"
species:7955 "Danio rerio" [GO:0030127 "COPII vesicle coat"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
ZFIN:ZDB-GENE-060526-224 GO:GO:0006886 GO:GO:0008270 GO:GO:0006888
GO:GO:0030127 SUPFAM:SSF82919 InterPro:IPR012990 Pfam:PF08033
SUPFAM:SSF81811 GeneTree:ENSGT00590000082962 EMBL:BX470224
EMBL:BX511148 IPI:IPI00611412 Ensembl:ENSDART00000088578
Uniprot:F1QMP9
Length = 765
Score = 68 (29.0 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSCQEGD-LSGMFSSKMIEDKNPNG-PSYFEFLVQ 77
+ LS +++ ++ L+ + +EGD ++EDK+PNG SY +FL
Sbjct: 696 ETSLSINTRALIHSLQSSAAVTLQLKLVREGDSCEESLQRLLVEDKSPNGGASYADFLFH 755
Query: 78 IH 79
+H
Sbjct: 756 LH 757
Score = 63 (27.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 2 DRGNCSPRYMRCT 14
DRGN +PRY+RCT
Sbjct: 36 DRGNATPRYVRCT 48
>UNIPROTKB|E1BIU0 [details] [associations]
symbol:SEC24C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
GO:GO:0005634 GO:GO:0006886 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0030127 SUPFAM:SSF82919
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811 KO:K14007
GeneTree:ENSGT00590000082962 CTD:9632 OMA:AQGHPGI EMBL:DAAA02061901
IPI:IPI00689331 RefSeq:NP_001192584.1 UniGene:Bt.65038 PRIDE:E1BIU0
Ensembl:ENSBTAT00000003616 GeneID:509488 KEGG:bta:509488
NextBio:20868987 Uniprot:E1BIU0
Length = 1094
Score = 107 (42.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
DN LSKK +++ +R +R Y++ QE L +F ++EDK+ G SY +FL
Sbjct: 1025 DNLLSKKVRGLIDSLRAQRSRYMKLIVVKQEDKLEMLFKHFLVEDKSLSGGASYVDFLCH 1084
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1085 MHKEIRQ 1091
>UNIPROTKB|E2RSG8 [details] [associations]
symbol:SEC24D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR006895
InterPro:IPR006896 InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811
Pfam:PF04815 GO:GO:0006886 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0030127 InterPro:IPR012990
Pfam:PF08033 SUPFAM:SSF81811 KO:K14007 GeneTree:ENSGT00590000082962
CTD:9871 OMA:PPNAQYQ EMBL:AAEX03016851 RefSeq:XP_535702.3
Ensembl:ENSCAFT00000019635 GeneID:478523 KEGG:cfa:478523
Uniprot:E2RSG8
Length = 1033
Score = 66 (28.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 14 TIGQQYDNPLSKKFNDVVNEMRRERCSYLRPRSCQEGDLSGM-FSSKMIEDKNP-NGPSY 71
T+ + NP S+ +++ ++++R ++ ++ + M F ++EDK G SY
Sbjct: 958 TLLPEVGNPYSQTLRMIMSIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSY 1017
Query: 72 FEFLVQIHREI 82
+FL +H+EI
Sbjct: 1018 VDFLCCVHKEI 1028
Score = 62 (26.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 2 DRGNCSPRYMRCT 14
D+GN SPRY+RCT
Sbjct: 304 DQGNASPRYIRCT 316
>UNIPROTKB|E1BUD8 [details] [associations]
symbol:SEC24C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030127 "COPII vesicle coat" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
GO:GO:0005634 GO:GO:0006886 GO:GO:0008270 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0030127 SUPFAM:SSF82919
InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
GeneTree:ENSGT00590000082962 OMA:AQGHPGI EMBL:AADN02027851
EMBL:AADN02027852 IPI:IPI00603215 Ensembl:ENSGALT00000008325
Uniprot:E1BUD8
Length = 1119
Score = 104 (41.7 bits), Expect = 0.00021, P = 0.00021
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 20 DNPLSKKFNDVVNEMRRERCSYLRPRSC-QEGDLSGMFSSKMIEDKN-PNGPSYFEFLVQ 77
+NP SKK +++ + +R Y++ QE L +F ++EDK+ G SY +FL
Sbjct: 1050 ENPFSKKVRSIIDMLHLQRSRYMKLIIVKQEDKLEMLFKHFLVEDKSLTGGASYVDFLCH 1109
Query: 78 IHREIQK 84
+H+EI++
Sbjct: 1110 MHKEIRQ 1116
>UNIPROTKB|O94855 [details] [associations]
symbol:SEC24D "Protein transport protein Sec24D"
species:9606 "Homo sapiens" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030127 "COPII vesicle coat" evidence=NAS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=NAS;TAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=TAS] [GO:0016044 "cellular
membrane organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
Reactome:REACT_111217 InterPro:IPR006895 InterPro:IPR006896
InterPro:IPR006900 Pfam:PF04810 Pfam:PF04811 Pfam:PF04815
GO:GO:0005829 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0006886
GO:GO:0000139 GO:GO:0002474 GO:GO:0019886 GO:GO:0005789
GO:GO:0008270 InterPro:IPR007123 Pfam:PF00626 GO:GO:0043687
GO:GO:0018279 GO:GO:0030127 GO:GO:0048208 PDB:3EG9 PDBsum:3EG9
EMBL:CH471229 InterPro:IPR012990 Pfam:PF08033 SUPFAM:SSF81811
PDB:3EFO PDBsum:3EFO eggNOG:COG5028 HOGENOM:HOG000196365 KO:K14007
HOVERGEN:HBG062229 EMBL:AF130464 EMBL:AB018298 EMBL:BC035761
IPI:IPI00218288 IPI:IPI00747830 RefSeq:NP_055637.2
UniGene:Hs.189641 ProteinModelPortal:O94855 SMR:O94855
IntAct:O94855 MINT:MINT-1184580 STRING:O94855 PhosphoSite:O94855
PaxDb:O94855 PRIDE:O94855 DNASU:9871 Ensembl:ENST00000280551
Ensembl:ENST00000379735 GeneID:9871 KEGG:hsa:9871 UCSC:uc003ici.4
UCSC:uc003icj.4 CTD:9871 GeneCards:GC04M119643 H-InvDB:HIX0004459
HGNC:HGNC:10706 HPA:HPA041626 MIM:607186 neXtProt:NX_O94855
PharmGKB:PA35629 OMA:PPNAQYQ OrthoDB:EOG4PZJ61 PhylomeDB:O94855
ChiTaRS:SEC24D EvolutionaryTrace:O94855 GenomeRNAi:9871
NextBio:37211 ArrayExpress:O94855 Bgee:O94855 CleanEx:HS_SEC24D
Genevestigator:O94855 GermOnline:ENSG00000150961 Uniprot:O94855
Length = 1032
Score = 67 (28.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 14 TIGQQYDNPLSKKFNDVVNEMRRERCSYLRPRSCQEGDLSGM-FSSKMIEDKNP-NGPSY 71
T+ + NP S++ ++ ++++R ++ ++ + M F ++EDK G SY
Sbjct: 957 TLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSY 1016
Query: 72 FEFLVQIHREI 82
+FL +H+EI
Sbjct: 1017 VDFLCCVHKEI 1027
Score = 58 (25.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 9/13 (69%), Positives = 12/13 (92%)
Query: 2 DRGNCSPRYMRCT 14
D+GN SPR++RCT
Sbjct: 303 DQGNASPRFIRCT 315
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 88 88 0.00091 102 3 11 22 0.46 29
29 0.49 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 519 (55 KB)
Total size of DFA: 112 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.32u 0.20s 10.52t Elapsed: 00:00:01
Total cpu time: 10.33u 0.20s 10.53t Elapsed: 00:00:01
Start: Fri May 10 04:58:47 2013 End: Fri May 10 04:58:48 2013