BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040150
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis
thaliana GN=ACA1 PE=1 SV=3
Length = 1020
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 1 MENYLNENFGSVKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRRSNQV 60
ME+YLNENFG VKPKNSS+EALQRWR+L IVKNPKR F FTANL+KRSEAEAIRRSNQ
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 SF 62
F
Sbjct: 61 KF 62
>sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza
sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1
Length = 1020
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/59 (71%), Positives = 49/59 (83%)
Query: 1 MENYLNENFGSVKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRRSNQ 59
ME+YL ENFG VK KNSSEEAL+RWR+L G+VKNPKR F FTANL KR EA+AI+ +N
Sbjct: 1 MESYLEENFGGVKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANH 59
>sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1
Length = 1014
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Query: 1 MENYLNENFGSVKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRRSNQ 59
ME+YLNENF VK K+SSEE L++WR L G+VKNPKR F FTANL+KR EA A+RR+NQ
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQ 58
>sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2
Length = 1015
Score = 83.2 bits (204), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 1 MENYLNENFGSVKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRRSNQ 59
ME+YLN NF VK K+SSEE L++WR L +VKNPKR F FTANL+KR EA A+RR+NQ
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQ 58
>sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type
OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3
SV=1
Length = 1039
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 1 MENYLNENFGSVKPKNSSEEALQRWRRLYG-IVKNPKRSFPFTANLAKRSEAEAIRRSNQ 59
++ YL ENF V KN SEEA +RWR+ G IVKN +R F + +L +RS +A RS Q
Sbjct: 4 LDRYLQENF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQ 62
>sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type
OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3
SV=1
Length = 1017
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 1 MENYLNENFGSVKPKNSSEEALQRWRRLYG-IVKNPKRSFPFTANLAKRSEAEAIRRSNQ 59
++ YL E+F V KN SEEA +RWR+ G IVKN +R F + +L +RS +A RS Q
Sbjct: 4 LDRYLQEHF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQ 62
>sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza
sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1
Length = 1043
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 12 VKPKNSSEEALQRWRRLYG-IVKNPKRSFPFTANLAKRSEAEAIRRSNQ 59
V KN SEEA +RWR G +VKN +R F +L KRS+AE RR Q
Sbjct: 17 VPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQ 65
>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1
Length = 1025
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 12 VKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIR 55
V KN S EA QRWR G+VKN R F +NL K +E E R
Sbjct: 10 VASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKR 53
>sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1
Length = 1074
Score = 35.4 bits (80), Expect = 0.099, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 12 VKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRR 56
+ KN+S E LQ+WR+ +V N R F +T +L K E +R+
Sbjct: 34 IPSKNASIERLQQWRKA-ALVLNASRRFRYTLDLKKEQETREMRQ 77
>sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1
Length = 1030
Score = 35.4 bits (80), Expect = 0.099, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 12 VKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAE----AIRRSNQVSFLLK 65
V+ KN S EA QRWR IVKN R F +L K ++ E I+ +V+F ++
Sbjct: 10 VEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQEKIRVAFFVQ 67
>sp|Q65X71|ACA6_ORYSJ Probable calcium-transporting ATPase 6, plasma membrane-type
OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3
SV=1
Length = 1021
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MENYLNENFGSVKPKNSSEEALQRWRRLYGIV 32
+E+YLNE F + KN EA +RWRR G++
Sbjct: 9 IESYLNEYF-DIPAKNPPGEARRRWRRAVGLI 39
>sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2
Length = 1086
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 15 KNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRR 56
KN+S E+L+RWR+ +V N R F +T +L K + RR
Sbjct: 51 KNASVESLRRWRQA-ALVLNASRRFRYTLDLNKEEHYDNRRR 91
>sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2
Length = 1069
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 4 YLNENFGSVKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAK-----------RSEAE 52
Y + F KN+ E L+RWR+ +V N R F +T +L + R+ A+
Sbjct: 26 YEDSPFDIASTKNAPVERLRRWRQA-ALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQ 84
Query: 53 AIRRSN 58
AIR ++
Sbjct: 85 AIRAAH 90
>sp|P51942|MATN1_MOUSE Cartilage matrix protein OS=Mus musculus GN=Matn1 PE=2 SV=2
Length = 500
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 36 KRSFPFTANLAKRSEAEAIRRSNQVSFLLKGSLNLKFLITSTLTD 80
K FP A+ +K S +A+RR +S L L+F IT L+D
Sbjct: 94 KPEFPLRAHGSKASLLQAVRRIQPLSTGTMTGLALQFAITKALSD 138
>sp|Q9ZDB3|DPO3B_RICPR DNA polymerase III subunit beta OS=Rickettsia prowazekii (strain
Madrid E) GN=dnaN PE=3 SV=1
Length = 381
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 17/75 (22%)
Query: 8 NFGSVKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRRSNQVSFLL-KG 66
NFG + P+ S+EE L+ IVK+PK + E + SN++ F+ +
Sbjct: 190 NFGVILPQKSAEEILK-------IVKDPKNI---------HEDIEILLSSNKIKFICNEN 233
Query: 67 SLNLKFLITSTLTDW 81
++ L LI T D+
Sbjct: 234 TILLSKLIDGTFPDY 248
>sp|Q4ULS3|DPO3B_RICFE DNA polymerase III subunit beta OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=dnaN PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 17/75 (22%)
Query: 8 NFGSVKPKNSSEEALQRWRRLYGIVKNPKRSFPFTANLAKRSEAEAIRRSNQVSFLL-KG 66
NFG + P+ S+EE L+ IVK+PK + E + SN++ F+ +
Sbjct: 190 NFGVILPQKSAEEILK-------IVKDPKNI---------NEDIEILLSSNKIKFICNEN 233
Query: 67 SLNLKFLITSTLTDW 81
++ L LI T D+
Sbjct: 234 TIMLSKLIDGTFPDY 248
>sp|O66709|Y388_AQUAE Uncharacterized protein aq_388 OS=Aquifex aeolicus (strain VF5)
GN=aq_388 PE=4 SV=1
Length = 301
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 6 NENFGSVKPKNSSEEALQRWRRLYGIVKN----PKRSFPFTANLAKRSEAEAIRRSNQVS 61
N NF V+ ++SEE LQR L ++ P RSF F L K + E + R
Sbjct: 238 NLNFSEVEISSNSEEVLQRLESLKDDIRKIFNVPIRSFNF---LLKENVKEEVLR----E 290
Query: 62 FLLKGSLNLK 71
L +G L+LK
Sbjct: 291 ILKEGGLDLK 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,288,535
Number of Sequences: 539616
Number of extensions: 841558
Number of successful extensions: 2573
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2556
Number of HSP's gapped (non-prelim): 22
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)