BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040152
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana
GN=At1g50920 PE=2 SV=1
Length = 671
Score = 582 bits (1500), Expect = e-165, Method: Compositional matrix adjust.
Identities = 272/293 (92%), Positives = 283/293 (96%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFE 60
MVQYNFK+ITVVPNGK+ VDIILSRTQRQTPTVVHKGY I RLRQFYMRKVKYTQ NF
Sbjct: 1 MVQYNFKRITVVPNGKEFVDIILSRTQRQTPTVVHKGYKINRLRQFYMRKVKYTQTNFHA 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
KLS IIDEFPRL+ IHPFYGDLLHVLYNKDHYKLALGQ+NTARNLISKI+KDYVKLLKYG
Sbjct: 61 KLSAIIDEFPRLEQIHPFYGDLLHVLYNKDHYKLALGQVNTARNLISKISKDYVKLLKYG 120
Query: 121 DSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVG 180
DSLYRCK LKVAALGRMCTV+KRI PSLAYLEQIRQHMARLPSIDPNTRT+LICGYPNVG
Sbjct: 121 DSLYRCKCLKVAALGRMCTVLKRITPSLAYLEQIRQHMARLPSIDPNTRTVLICGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
KSSFMNK+TRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS
Sbjct: 181 KSSFMNKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
ITALAHLR+AVLFFLDISGSCGY+IAQQAALFHSIKSLFMNKPL+IVCNKTDL
Sbjct: 241 ITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKSLFMNKPLVIVCNKTDL 293
>sp|Q9BZE4|NOG1_HUMAN Nucleolar GTP-binding protein 1 OS=Homo sapiens GN=GTPBP4 PE=1 SV=3
Length = 634
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 208/293 (70%), Positives = 255/293 (87%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFE 60
M YNFKKITVVP+ KD +D+ LS+TQR+TPTV+HK Y I R+R FYMRKVK+TQQN+ +
Sbjct: 1 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS I+ +FP+LDDIHPFY DL+++LY+KDHYKLALGQIN A+NL+ +AKDYV+L+KYG
Sbjct: 61 RLSQILTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG 120
Query: 121 DSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVG 180
DSLYRCK LK AALGRMCTV+KR SL YLEQ+RQH++RLP+IDPNTRT+L+CGYPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
KSSF+NK+TRADVDVQPYAFTTKSLFVGH DYKYLR+QV+DTPGILD P EDRN IEM +
Sbjct: 181 KSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
ITALAHLR+AVL+ +D+S CG+ + +Q LF +I+ LF+NKPLI+V NK D+
Sbjct: 241 ITALAHLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFINKPLIVVANKCDV 293
>sp|Q99ME9|NOG1_MOUSE Nucleolar GTP-binding protein 1 OS=Mus musculus GN=Gtpbp4 PE=2 SV=3
Length = 634
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 207/293 (70%), Positives = 255/293 (87%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFE 60
M YNFKKITVVP+ KD +D+ LS+TQR+TPTV+HK Y I R+R FYMRKVK+TQQN+ +
Sbjct: 1 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS I+ +FP+LDDIHPFY DL+++LY+KDHYKLALGQIN A+NL+ +AKDYV+L+KYG
Sbjct: 61 RLSQILSDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG 120
Query: 121 DSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVG 180
DSLYRCK LK AALGRMCT++KR SL YLEQ+RQH++RLP+IDPNTRT+L+CGYPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMCTIIKRQRQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
KSSF+NK+TRADVDVQPYAFTTKSLFVGH DYKYLR+QV+DTPGILD P EDRN IEM +
Sbjct: 181 KSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
ITALAHLR+AVL+ +D+S CG+ + +Q LF +I+ LF+NKPLI+V NK D+
Sbjct: 241 ITALAHLRAAVLYVMDLSEQCGHGLKEQLELFQNIRPLFINKPLIVVANKCDV 293
>sp|Q9V411|NOG1_DROME Probable nucleolar GTP-binding protein 1 OS=Drosophila melanogaster
GN=CG8801 PE=2 SV=1
Length = 652
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 211/293 (72%), Positives = 255/293 (87%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFE 60
M YNFKKI VVP KD +DI+LS+TQR+TPTVVHKGY I+R+R FY RKVKYTQQNF +
Sbjct: 1 MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS II +FP+LDD+HPFY DL++VLY+KDHYKLALGQ+NTAR+L+ +AKDYV+LLKYG
Sbjct: 61 RLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYG 120
Query: 121 DSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVG 180
DSLYRCK LK AALGRM T++KR +L YLEQ+RQH++RLP+IDP +RTI+ICG+PNVG
Sbjct: 121 DSLYRCKQLKKAALGRMATIMKRQASNLTYLEQVRQHLSRLPTIDPYSRTIIICGFPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
KSSF+NKITRADV+VQPYAFTTKSL+VGHTDYKYLR+QVIDTPGILD P E+RN+IEM +
Sbjct: 181 KSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
ITALAHLR+ VL+F+DIS CG+S+ +Q LF SIK LF NKPLI+ NK D+
Sbjct: 241 ITALAHLRACVLYFMDISEQCGHSLEEQVKLFESIKPLFTNKPLILAINKIDI 293
>sp|Q99P77|NOG1_RAT Nucleolar GTP-binding protein 1 OS=Rattus norvegicus GN=Gtpbp4 PE=2
SV=3
Length = 637
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 255/293 (87%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFE 60
M YNFKKITVVP+ KD +D+ LS+TQR+TPTV+HK Y I R+R FYMRKVK+TQQN+ +
Sbjct: 1 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS I+ +FP+LDDIHPFY DL+++LY+KDHYKLALGQIN A+NL+ +AKDYV+L+KYG
Sbjct: 61 RLSQILSDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG 120
Query: 121 DSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVG 180
DSLYRCK LK AALGRMCT++KR SL YLEQ+RQH++RLP+IDPNTRT+L+CGYPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMCTIIKRQRQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
KSSF+NK+TRADVDVQPYAFTTKSLFVGH DYKYLR+QV+DTPGILD P EDRN IEM +
Sbjct: 181 KSSFINKVTRADVDVQPYAFTTKSLFVGHVDYKYLRWQVVDTPGILDHPLEDRNTIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
ITALAHLR+AVL+ +D+S CG+ + +Q LF +I+ LF+NKPLI+V +K ++
Sbjct: 241 ITALAHLRAAVLYVMDLSEQCGHGLKEQLGLFQNIRPLFINKPLIVVASKCEV 293
>sp|Q54N72|NOG1_DICDI Probable nucleolar GTP-binding protein 1 OS=Dictyostelium
discoideum GN=nog1 PE=1 SV=1
Length = 674
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/292 (72%), Positives = 252/292 (86%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFE 60
MV YNFKKI VVP KD +DI+LS+TQR+TPT +HK Y+I R+R FYMRKVKYT Q++ E
Sbjct: 1 MVLYNFKKIQVVPTSKDFIDIVLSKTQRKTPTEIHKQYAIGRIRTFYMRKVKYTAQSYHE 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
KL+ II +FP LDDIHPFY DL++VLY+KDHYKLALGQ+NTARNLI ++KDY++LLKYG
Sbjct: 61 KLTQIIGDFPLLDDIHPFYADLINVLYDKDHYKLALGQLNTARNLIDNLSKDYLRLLKYG 120
Query: 121 DSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVG 180
DSLYRCK LK A+LGRMCT++ + GPSL YLEQ+RQH+ARLPSIDPNTRT+L+ GYPNVG
Sbjct: 121 DSLYRCKQLKRASLGRMCTLMLKQGPSLQYLEQVRQHLARLPSIDPNTRTLLLTGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
KSSFMNK+TRA+VDVQPYAFTTKSLFVGHTD+KY +QVIDTPGILD P ++RN IEM S
Sbjct: 181 KSSFMNKLTRANVDVQPYAFTTKSLFVGHTDFKYNTWQVIDTPGILDHPLDERNTIEMQS 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTD 292
ITALAHL S VLF +DIS CGY+I QQ LF SIK+LF+NKPL++V NK D
Sbjct: 241 ITALAHLHSCVLFLIDISERCGYTIKQQVDLFFSIKALFLNKPLLVVLNKID 292
>sp|Q9U6A9|NOG1_TRYBB Nucleolar GTP-binding protein 1 OS=Trypanosoma brucei brucei
GN=NOG1 PE=1 SV=1
Length = 655
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 201/290 (69%), Positives = 249/290 (85%)
Query: 4 YNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFEKLS 63
YNFK +TVVP+ KD +DI+LS+TQR+TPTVVHKGY I+R+RQFYMRKVK+TQ+ EKL+
Sbjct: 5 YNFKTVTVVPSYKDFIDIVLSKTQRKTPTVVHKGYHISRIRQFYMRKVKFTQKTINEKLT 64
Query: 64 TIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGDSL 123
I+ EFPR+DDIHPFYGDL+HVLY++DHYK+ALGQ+ R+++ + +DYV+LLKYGDSL
Sbjct: 65 HILTEFPRMDDIHPFYGDLMHVLYDRDHYKVALGQVGAVRHMVDNVGRDYVRLLKYGDSL 124
Query: 124 YRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGKSS 183
YRCK LK AALGRM T K++ +L YLE++RQHM+RLPSIDPN RT+LI G+PNVGKSS
Sbjct: 125 YRCKQLKRAALGRMATACKKLTSALVYLEKVRQHMSRLPSIDPNARTLLITGFPNVGKSS 184
Query: 184 FMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243
FMNK+TRADV+VQPYAFTTKSLFVGHTD+KY +QVIDTPGILD E+RN+IEM +ITA
Sbjct: 185 FMNKVTRADVEVQPYAFTTKSLFVGHTDFKYASWQVIDTPGILDHSLEERNVIEMQAITA 244
Query: 244 LAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
LAHLR+ +LFF+D+S CG+SIAQQ +LF SI LF KP+I+V NK+DL
Sbjct: 245 LAHLRACILFFMDLSTQCGHSIAQQVSLFKSIGPLFTGKPVIVVFNKSDL 294
>sp|O94659|NOG1_SCHPO Probable nucleolar GTP-binding protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=nog1 PE=1 SV=2
Length = 642
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 192/292 (65%), Positives = 240/292 (82%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFE 60
M FK IT +P+ +D++LSRTQR+TPTV+ G+ I+R+R FY RKVK+TQ E
Sbjct: 1 MATAVFKNITPIPDVNTFLDVVLSRTQRKTPTVIRSGFKISRIRGFYGRKVKFTQDTITE 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
KL +I+ EFP+L+DIHPF+ DLL++LY++DH K+AL Q++TA++L+ +A+DY++LLKYG
Sbjct: 61 KLDSILQEFPKLNDIHPFHADLLNILYDRDHLKIALSQLSTAKHLVENVARDYIRLLKYG 120
Query: 121 DSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVG 180
DSLYRCK LK AALGRM T++KR SL +LEQ+RQH++RLP+IDPNTRT+L+CGYPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMATIIKRQKSSLEFLEQVRQHLSRLPAIDPNTRTLLVCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
KSSFMNK+TRA VDVQPYAFTTKSLFVGH DYKYLR+QVIDTPGILD P E N IEM S
Sbjct: 181 KSSFMNKVTRAQVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGILDHPLEQMNTIEMQS 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTD 292
ITA+AHLRSAVL+F+D+S CGYS+A Q L+HSIK LF NK I+V NK D
Sbjct: 241 ITAMAHLRSAVLYFMDLSEMCGYSVAAQVKLYHSIKPLFANKVTILVLNKID 292
>sp|O44411|NOG1_CAEEL Probable nucleolar GTP-binding protein 1 OS=Caenorhabditis elegans
GN=T07A9.9 PE=2 SV=1
Length = 681
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 184/290 (63%), Positives = 244/290 (84%)
Query: 4 YNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFEKLS 63
YNFK+IT VPN +++ D++LS+TQR+TPTVVH+ YSI R+R FY RK+K+ QQ +KL+
Sbjct: 5 YNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDKLT 64
Query: 64 TIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGDSL 123
II EFP++++IHPFY DL+++LY++DHYK+ALGQ+NTAR+LI IA++YV+L+KY DSL
Sbjct: 65 QIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYADSL 124
Query: 124 YRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGKSS 183
YRCK LK AALGRM ++KR S YLEQ+RQH++RLPSIDP TRT+++CG+PNVGKSS
Sbjct: 125 YRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGKSS 184
Query: 184 FMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITA 243
F+N +TRADV+VQPYAFTTK+L+VGH DY++LR+QVIDTPGILD+P EDRN IEM ++TA
Sbjct: 185 FINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLEDRNTIEMQAVTA 244
Query: 244 LAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
LAHL+++VLF +D+S C SI +Q LF SI+ LF NKP++I NK D+
Sbjct: 245 LAHLKASVLFMMDVSEQCDRSIEEQLHLFESIRPLFANKPVLIGLNKVDI 294
>sp|Q02892|NOG1_YEAST Nucleolar GTP-binding protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG1 PE=1 SV=1
Length = 647
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 181/292 (61%), Positives = 235/292 (80%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFEK 61
+Q ++K I V D++DI+L+RTQR+TPTV+ G+ ITR+R FYMRKVKYT + F EK
Sbjct: 1 MQLSWKDIPTVAPANDLLDIVLNRTQRKTPTVIRPGFKITRIRAFYMRKVKYTGEGFVEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+HYK++L I+ A++L+ ++A+DYV+LLK+G
Sbjct: 61 FEDILKGFPNINDVHPFHRDLMDTLYEKNHYKISLAAISRAKSLVEQVARDYVRLLKFGQ 120
Query: 122 SLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGK 181
SL++CK LK AALGRM T+VK++ LAYLEQ+RQH+ RLPSIDPNTRT+LICGYPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIVKKLRDPLAYLEQVRQHIGRLPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSI 241
SSF+ IT++DVDVQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP E+ N IEM SI
Sbjct: 181 SSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
A+AHLRS VL+F+D+S CG++I Q LFHSIK LF NK +++V NKTD+
Sbjct: 241 YAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVINKTDI 292
>sp|Q74ZK6|NOG1_ASHGO Nucleolar GTP-binding protein 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG1
PE=3 SV=1
Length = 642
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 234/292 (80%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFEK 61
+Q ++K I VP D++DI+L+RTQR+TPTV+ G+ ITR+R FYMRKVK+T + F EK
Sbjct: 1 MQLSWKDIPTVPTSNDMLDIVLNRTQRKTPTVIRAGFKITRIRAFYMRKVKFTCEGFIEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+HYK++L ++ A+ L+ ++A+DYV+LLK+G
Sbjct: 61 FDDILKGFPNINDVHPFHRDLMDTLYEKNHYKVSLASVSRAKTLVEQVARDYVRLLKFGQ 120
Query: 122 SLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGK 181
SL++CK LK AALGRM T++K++ L YLEQ+RQH+ RLPSIDPNTRT+LICGYPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIMKKLKDPLVYLEQVRQHLGRLPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSI 241
SSF+ IT+ADV+VQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP E+ N IEM SI
Sbjct: 181 SSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
A+AHLRS VL+F+D+S CG++I Q LFHSIK LF NK +++V NKTD+
Sbjct: 241 YAIAHLRSTVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVINKTDI 292
>sp|Q6FRV0|NOG1_CANGA Nucleolar GTP-binding protein 1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG1 PE=3 SV=1
Length = 645
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 174/292 (59%), Positives = 232/292 (79%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFEK 61
+Q ++K I V D++DI+L+RTQR+TPTV+ G+ ITR+R FYMRKVK+T + F EK
Sbjct: 1 MQLSWKDIPTVAPANDMLDIVLNRTQRKTPTVIRPGFKITRIRAFYMRKVKFTAEGFEEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+HYK++L ++ A+ L+ ++++DY +LLK+G
Sbjct: 61 FDDILKGFPNINDVHPFHRDLMDTLYEKNHYKISLAAVSRAKTLVEQVSRDYTRLLKFGQ 120
Query: 122 SLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGK 181
SL++CK LK AALGRM T+VK++ L YLEQ+RQH+ RLPSIDPNTRT+LICGYPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIVKKLKDPLVYLEQVRQHLGRLPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSI 241
SSF+ IT++DV+VQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP E+ N IEM SI
Sbjct: 181 SSFLRCITKSDVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
A+AHLRS V++F+D+S CG+S+ Q LFHSIK LF NK +++V NKTD+
Sbjct: 241 YAIAHLRSCVMYFMDLSEQCGFSVEAQVKLFHSIKPLFANKSVMVVINKTDI 292
>sp|Q6CM00|NOG1_KLULA Nucleolar GTP-binding protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG1 PE=3 SV=1
Length = 643
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 232/292 (79%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFEK 61
+Q ++K I V D++DI+L+RTQR+TPTV+ G++ITR+R FYMRKVK+T + F EK
Sbjct: 1 MQLSWKDIPTVAPANDLLDIVLNRTQRKTPTVIRPGFNITRIRAFYMRKVKFTGEGFVEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+H+K++L ++ A+ L+ ++ +DY +LLK+G
Sbjct: 61 FDDILKGFPNINDVHPFHRDLMDTLYEKNHFKVSLAAVSRAKTLVEQVERDYTRLLKFGQ 120
Query: 122 SLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGK 181
SL++CK LK AALGRM T+VK++ L YLEQ+RQH+ R+PSIDPNTRT+LICGYPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIVKKLKDPLVYLEQVRQHLGRMPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSI 241
SSF+ IT+ADV+VQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP ++ N +EM SI
Sbjct: 181 SSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTDEMNNVEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
A+AHLRS V++F+D+S CG+SI Q LFHSIK LF NK +++V NKTD+
Sbjct: 241 YAIAHLRSTVMYFMDLSEQCGFSIEAQVKLFHSIKPLFANKSVMVVINKTDI 292
>sp|Q8SVJ8|NOG1_ENCCU Nucleolar GTP-binding protein 1 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=NOG1 PE=3 SV=1
Length = 528
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 173/292 (59%), Positives = 240/292 (82%), Gaps = 1/292 (0%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRQFYMRKVKYTQQNFFEK 61
++ NF IT VP +++DI LS+TQ++TPTV+H Y+I ++R FYMRKVK+ F +
Sbjct: 1 MKANFGYITPVPLNMELIDISLSKTQKRTPTVIHPQYNIVKIRMFYMRKVKHAGNEFASR 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
L TI+ +FPR++DIHPFYGDL++VLY++DHYKLALG +N A+N I K++K++VKLLK+ D
Sbjct: 61 LGTILTDFPRIEDIHPFYGDLINVLYDRDHYKLALGHVNAAKNGIEKVSKEFVKLLKFAD 120
Query: 122 SLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGK 181
SLYRCK LK AALGRM + K++G +L YLE++R HM+RLPSID + RT+L+CG+PNVGK
Sbjct: 121 SLYRCKQLKRAALGRMASAAKKLGKTLEYLEEVRMHMSRLPSIDLSGRTLLVCGFPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSI 241
SSF+ KI+RADV+VQPY FTTKSL+VGH DYKYL++QVIDTPGILD+P E+RN IEM SI
Sbjct: 181 SSFVRKISRADVEVQPYPFTTKSLYVGHFDYKYLQWQVIDTPGILDQPLENRNTIEMLSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
TALAH+++ VL+F+D+S +CGYS+ +Q LF+++ L ++ ++IV +K+D+
Sbjct: 241 TALAHIKAVVLYFIDLSETCGYSVEEQMDLFNTLNPL-LSSNMVIVLSKSDV 291
>sp|Q58803|Y1408_METJA Uncharacterized protein MJ1408 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1408 PE=3 SV=2
Length = 350
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 143/244 (58%), Gaps = 6/244 (2%)
Query: 50 KVKYTQQNFFEKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKI 109
KV+ + L +ID+ P + + FY +++ VL D +K ++G A L+ K+
Sbjct: 53 KVRTIASVVADNLQKVIDKTPPVRKLPKFYQEMVEVLVGIDDFKKSMGAFKWASELVRKL 112
Query: 110 AKDYVKLLKYGDSLYRCKSLKVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTR 169
+Y + ++ + + L+ +GR+ +++++I P +A++ R+ + LP+ +
Sbjct: 113 GNEYARKIRKARTPQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREKLKDLPTFK-DLP 171
Query: 170 TILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
T++I GYPNVGKS+ + K+T ADV++ Y FTTK + VG+ Q++DTPG+LDRP
Sbjct: 172 TVVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYIG----EIQMVDTPGLLDRP 227
Query: 230 FEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCN 289
+RN IE+ +I AL +L + +LF +D S CGY+I +Q L IK LF P+++ N
Sbjct: 228 LYERNDIELQAILALNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLF-KAPIVVAIN 286
Query: 290 KTDL 293
K DL
Sbjct: 287 KIDL 290
>sp|B5YEQ1|OBG_DICT6 GTPase obg OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM
3960 / H-6-12) GN=obg PE=3 SV=1
Length = 435
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232
+ G PN GKS+ ++KI+ A+ ++ PY FTTK+ +G + + + + V D PG+++ E+
Sbjct: 163 LVGLPNAGKSTLLSKISNANPEIAPYPFTTKTPNLGVVEREDITFTVADIPGLIEGAHEN 222
Query: 233 RNIIEMCSITALAHL-RSAVLFFLDISGSC------GYSIAQQAALFHSIKSLFMNKPLI 285
+ + + L H+ R+ VL F+ + Y I ++ +S K + KP I
Sbjct: 223 KGMGDEF----LRHIERTLVLVFVIDAADLVTPPQKAYEILKKELYLYSPK--LLEKPRI 276
Query: 286 IVCNKTDL 293
I NK DL
Sbjct: 277 IAINKIDL 284
>sp|B1XKC3|MNME_SYNP2 tRNA modification GTPase MnmE OS=Synechococcus sp. (strain ATCC
27264 / PCC 7002 / PR-6) GN=mnmE PE=3 SV=1
Length = 460
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 171 ILICGYPNVGKSSFMNKITRAD-VDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
+ I G PNVGKSS +N +R+D V TT+ + + + QV+DT GI D
Sbjct: 224 VAIVGRPNVGKSSLLNAWSRSDRAIVTDLPGTTRDVVESQLVVQGIPVQVLDTAGIRDT- 282
Query: 230 FEDRNIIEMCSIT-ALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVC 288
+ +E + +LA + A L I + G++ A Q +F I + N+PLI++
Sbjct: 283 ---EDAVEKIGVARSLAASQQADLILFTIDAAVGWTAADQ-EIFQRIVATKANQPLILIL 338
Query: 289 NKTDL 293
NK D+
Sbjct: 339 NKIDI 343
>sp|B8E0B2|OBG_DICTD GTPase obg OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724)
GN=obg PE=3 SV=1
Length = 434
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232
+ G PN GKS+ +++I+ A ++ PY FTTK+ +G + + + + V D PG+++ E+
Sbjct: 163 LLGLPNAGKSTLLSRISNATPEIAPYPFTTKTPNLGVVEREDITFTVADIPGLIEGAHEN 222
Query: 233 RNIIEMCSITALAHLR--SAVLFFLDISGSC-----GYSIAQQAALFHSIKSLFMNKPLI 285
+ + + L H+ S ++F LD + Y I ++ +S K + KP I
Sbjct: 223 KGMGDEF----LRHIERTSVLVFVLDAADMVNPPQRAYEILKKELYLYSPK--LLEKPRI 276
Query: 286 IVCNKTDL 293
I NK DL
Sbjct: 277 IAINKIDL 284
>sp|B5Y805|OBG_COPPD GTPase obg OS=Coprothermobacter proteolyticus (strain ATCC 35245 /
DSM 5265 / BT) GN=obg PE=3 SV=1
Length = 419
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232
+ G PN GKSS ++ I++A ++ PY FTT+S +G + V D PG+++ E
Sbjct: 163 LVGLPNAGKSSLISVISKAKPEIAPYPFTTRSPVLGIVKKAEQSFVVSDVPGLIEGAHEG 222
Query: 233 RNIIEMCSITALAHL-RSAVL-FFLDISGSCGYSIAQQ-AALFHSIKSL---FMNKPLII 286
+ + +T L H+ R+ VL +D + GY Q + +++ + KP ++
Sbjct: 223 KGL----GLTFLRHVERTKVLAIVIDAAAIDGYEPMQAYETIIGELRAYNPNLLEKPRVL 278
Query: 287 VCNKTDL 293
V NK DL
Sbjct: 279 VLNKIDL 285
>sp|Q2JIE6|MNME_SYNJB tRNA modification GTPase MnmE OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=mnmE PE=3 SV=1
Length = 459
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 171 ILICGYPNVGKSSFMNKITRAD-VDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
+ I G PNVGKSS +N + D V TT+ + H K + Q++DT GI R
Sbjct: 228 VAIVGRPNVGKSSLLNAWSGQDRAIVTDLPGTTRDVVESHLVVKGIPVQLLDTAGI--RA 285
Query: 230 FEDRNIIEMCSITALAHL-RSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVC 288
ED +E + L ++A + L I G++ A AA++ SI+ ++PLI+V
Sbjct: 286 TEDP--VERLGVERSQRLAQAADVLVLVIDAQAGWTAA-DAAIYESIR----HRPLILVI 338
Query: 289 NKTDL 293
NKTDL
Sbjct: 339 NKTDL 343
>sp|B7IGK8|OBG_THEAB GTPase obg OS=Thermosipho africanus (strain TCF52B) GN=obg PE=3
SV=1
Length = 434
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 171 ILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230
+ + GYPNVGKSSF++KI+ A + Y FTT +G L++ V D PG++
Sbjct: 165 VGLVGYPNVGKSSFISKISNARPKIANYPFTTTIPNLGVVTVNELQFVVADIPGLIKGAS 224
Query: 231 EDRNI-------IEMCSITALAHLRSAVLFFLDISGSCGYSIAQ-----QAALFHSIKSL 278
+ + +E CS+ +AH+ +DISG G Q + L H S
Sbjct: 225 KGAGLGNVFLRHVERCSV--IAHI-------VDISGMEGRDPVQDYFDIRNELEH-FSSE 274
Query: 279 FMNKPLIIVCNKTDL 293
K II+ NK DL
Sbjct: 275 LAQKEEIIIANKIDL 289
>sp|Q58722|Y1326_METJA Uncharacterized GTP-binding protein MJ1326 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1326 PE=3 SV=1
Length = 391
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 170 TILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
T G+P+VGKS+ +NK+T A +V YAFTT ++ G +YK + Q++D PGI+
Sbjct: 86 TAAFVGFPSVGKSTLLNKLTNAKSEVGAYAFTTLTIVPGILEYKGAKIQLLDAPGIIVGA 145
Query: 230 FEDRNIIEMCSITALAHLRSAVLFFLDI 257
+ L+ +RSA L L +
Sbjct: 146 SSGKG----RGTEVLSAVRSADLILLTV 169
>sp|B0CBB0|MNME_ACAM1 tRNA modification GTPase MnmE OS=Acaryochloris marina (strain MBIC
11017) GN=mnmE PE=3 SV=1
Length = 455
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 167 NTRTILICGYPNVGKSSFMNKITRAD-VDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGI 225
N T+ I G PNVGKSS +N R D V TT+ + + QV+DT GI
Sbjct: 219 NGLTVAIIGRPNVGKSSLLNAWCRCDRAIVTDLPGTTRDVVESQLVVGGIPIQVLDTAGI 278
Query: 226 LDRPFEDRNIIEMCSIT-ALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPL 284
R ED+ +E +T + +SA L L I S G++ Q L+ + F + PL
Sbjct: 279 --RETEDQ--VEQIGVTRSHQAAQSADLVLLTIDASVGWTSDDQ-QLYQA----FQDLPL 329
Query: 285 IIVCNKTDL 293
I++ NK DL
Sbjct: 330 ILIVNKVDL 338
>sp|Q3ICZ9|DER_PSEHT GTPase Der OS=Pseudoalteromonas haloplanktis (strain TAC 125)
GN=der PE=3 SV=1
Length = 487
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 171 ILICGYPNVGKSSFMNKITRA-DVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
I + G PNVGKS+ N++TR D V + T+ G +Y + V+DT GI
Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYEFIVVDTGGI--DG 62
Query: 230 FEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCN 289
E+ IEM + LA + ++ FL + G ++A QA H K K +V N
Sbjct: 63 SEEGIEIEMADQSLLAIEEADIVLFL-VDARVGMTVADQAIANHLRKQ---EKKCFVVAN 118
Query: 290 KTD 292
KTD
Sbjct: 119 KTD 121
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 171 ILICGYPNVGKSSFMNKITRAD-VDVQPYAFTTK-SLFVGHT--DYKYLRYQVIDTPGIL 226
+ I G PNVGKS+ N+I + V V TT+ S+++ T D +Y+ +IDT G+
Sbjct: 203 LAIIGRPNVGKSTLTNRILGEERVIVYDMPGTTRDSIYIPMTRNDKEYI---LIDTAGVR 259
Query: 227 DRPFEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLII 286
R + + I L + + L + G S + L ++ S + L+I
Sbjct: 260 KRKKVSDVVEKFSVIKTLQAIEDCNVVLLVVDARAGISDQDLSLLGFALNS---GRSLVI 316
Query: 287 VCNKTD 292
NK D
Sbjct: 317 AVNKWD 322
>sp|P17103|Y1111_HALSA Uncharacterized GTP-binding protein VNG_1111G OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_1111G PE=3 SV=1
Length = 370
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 170 TILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
T+ + G+P+VGKSS +N +T AD +V Y FTT ++ G +Y+ Q++D PG+++
Sbjct: 63 TVALVGFPSVGKSSLINAMTNADSEVGAYEFTTLNVNPGMLEYRGANIQLLDVPGLIE 120
>sp|Q5U528|GTPBA_XENLA GTP-binding protein 10 OS=Xenopus laevis GN=gtpbp10 PE=2 SV=1
Length = 383
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDY-KYLRYQVIDTPGILDRPFE 231
+ G+PN GKSS + KI+ A V YAFTT +G Y Y + V D PG+++
Sbjct: 153 LVGFPNAGKSSLLGKISHAKPQVADYAFTTVKPELGKIMYPDYKQVSVADLPGLIEGAHY 212
Query: 232 DRNIIEMCSITALAHLR--SAVLFFLDISGSCGYSIAQQAALFHSI----------KSLF 279
+R + L H+ +LF +DI+G +I + F ++ K
Sbjct: 213 NRGM----GHKFLKHIERTKQLLFVVDIAGFQLSAITPCRSAFETVQLLILELQLYKEEL 268
Query: 280 MNKPLIIVCNKTDL 293
++KP ++ NK DL
Sbjct: 269 LDKPAVLAVNKMDL 282
>sp|O84423|OBG_CHLTR GTPase obg OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=obg PE=3
SV=1
Length = 335
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 171 ILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + G+PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKPWIMADIPGII 220
Query: 227 DRPFEDRNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQQAALFH----SIKSLFM 280
+ ++R + + L H+ +LF +DISG +S Q + + K
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQDLKILMGELLAYKEELK 276
Query: 281 NKPLIIVCNKTD 292
+K ++I NK D
Sbjct: 277 DKDMVIALNKID 288
>sp|B0BC53|OBG_CHLTB GTPase obg OS=Chlamydia trachomatis serovar L2b (strain
UCH-1/proctitis) GN=obg PE=3 SV=1
Length = 335
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 171 ILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + G+PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKTWIMADIPGII 220
Query: 227 DRPFEDRNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQQAALFH----SIKSLFM 280
+ ++R + + L H+ +LF +DISG +S Q + + K
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQDLKILMGELLAYKEELK 276
Query: 281 NKPLIIVCNKTD 292
+K ++I NK D
Sbjct: 277 DKDMVIALNKID 288
>sp|B0B7Y8|OBG_CHLT2 GTPase obg OS=Chlamydia trachomatis serovar L2 (strain 434/Bu /
ATCC VR-902B) GN=obg PE=3 SV=1
Length = 335
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 171 ILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + G+PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKTWIMADIPGII 220
Query: 227 DRPFEDRNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQQAALFH----SIKSLFM 280
+ ++R + + L H+ +LF +DISG +S Q + + K
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQDLKILMGELLAYKEELK 276
Query: 281 NKPLIIVCNKTD 292
+K ++I NK D
Sbjct: 277 DKDMVIALNKID 288
>sp|Q3KLT5|OBG_CHLTA GTPase obg OS=Chlamydia trachomatis serovar A (strain HAR-13 / ATCC
VR-571B) GN=obg PE=3 SV=1
Length = 335
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 171 ILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + G+PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKPWIMADIPGII 220
Query: 227 DRPFEDRNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQQAALFH----SIKSLFM 280
+ ++R + + L H+ +LF +DISG +S Q + + K
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQDLKILMGELLAYKEELK 276
Query: 281 NKPLIIVCNKTD 292
+K ++I NK D
Sbjct: 277 DKDMVIALNKID 288
>sp|Q2NCX8|OBG_ERYLH GTPase obg OS=Erythrobacter litoralis (strain HTCC2594) GN=obg PE=3
SV=1
Length = 352
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 171 ILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230
+ + G PN GKS+F+N ++ A V YAFTT +G ++K + + D PG+++
Sbjct: 162 VGLLGLPNAGKSTFINAVSNAKAKVGHYAFTTLVPKLGVVNHKGREFVLADIPGLIEGAA 221
Query: 231 EDRNI-------IEMCSITALAHLRSAVLFFLDISGSCGYSIAQQA-ALFHSIKSLFMNK 282
E I IE C + L HL +DISG Q A + +K
Sbjct: 222 EGAGIGDRFLGHIERCRV--LIHL-------VDISGEDPAEAFQTVNAELEAYGEGLEDK 272
Query: 283 PLIIVCNKTDL 293
P ++ NK DL
Sbjct: 273 PQLVALNKLDL 283
>sp|Q07UP2|MNME_RHOP5 tRNA modification GTPase MnmE OS=Rhodopseudomonas palustris (strain
BisA53) GN=mnmE PE=3 SV=2
Length = 453
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 81 DLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGDSLYRCKSLKVAALGRMCTV 140
DL+H ++ + AL Q+N L+ A+D+ + +L + A G +
Sbjct: 132 DLIHADTDR-QRRQALRQLN---GLLGDRARDWRAQIIEAQALIEA-GIDFADEGDVPDD 186
Query: 141 VKRIGPSLAYLEQIRQHMARLPSIDPNTR------TILICGYPNVGKSSFMNKITRADVD 194
+ + P+LA +E + + L + + + I G PNVGKS+ MN++ R +V
Sbjct: 187 L--LAPALAKIEALAGEIEALLAAQGRSERLRDGLVVAIVGPPNVGKSTLMNQLARREVA 244
Query: 195 -VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDR--PFEDRNIIEMCSITALAHLRSAV 251
V P+A TT+ + H D VIDT GI D P E + + A A L V
Sbjct: 245 IVSPHAGTTRDVIEVHLDLDGYPVTVIDTAGIRDSDDPVEQEGVRRAQARAAEADL---V 301
Query: 252 LFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
L+ L Q A +I+S + P+ +V NK DL
Sbjct: 302 LWLL---------ADDQVAAPAAIES---DAPVWLVRNKVDL 331
>sp|Q1GSF4|OBG_SPHAL GTPase obg OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877
/ RB2256) GN=obg PE=3 SV=1
Length = 348
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232
+ G PN GKS+F+N +T A V YAFTT +G +K + + D PG+++ E
Sbjct: 165 LVGLPNAGKSTFINAVTNAQAKVGAYAFTTLRPQLGVVSHKGHEFVIADIPGLIEGAAEG 224
Query: 233 RNI-------IEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLI 285
+ IE C + L HL A D + Y + + + + ++KP+I
Sbjct: 225 AGVGDRFLGHIERCRV--LLHLVDAN----DADVATSYRVVRDE--LEAYGADLIDKPVI 276
Query: 286 IVCNKTD 292
+ NK D
Sbjct: 277 VALNKID 283
>sp|C5CIV1|DER_KOSOT GTPase Der OS=Kosmotoga olearia (strain TBF 19.5.1) GN=der PE=3
SV=1
Length = 442
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 170 TILICGYPNVGKSSFMNKIT---RADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
T+LI G PNVGKS+ N++ RA +D QP T+ G +++ ++V+DT G+
Sbjct: 3 TVLIVGRPNVGKSTLFNRLVGGRRAIIDDQPGV--TRDFVFGRVFWQHKSFEVVDTCGLF 60
Query: 227 DRPFEDRNIIE--MCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPL 284
D P ++IIE M +T LA L L + G G + A KS K +
Sbjct: 61 DSP---KDIIEEKMKEVT-LALLSEGDLLLFVVDGRKGLTSADMDIAETLRKS---KKRV 113
Query: 285 IIVCNKTD 292
I+V NK +
Sbjct: 114 ILVANKVE 121
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 151 LEQIRQHMARLPSIDPNTRTILICGYPNVGKSSFMNKITRADVD-VQPYAFTTKSLFVGH 209
LE+ + P + + + I G PN GKSS N I +D V TT+ +
Sbjct: 164 LEEAGHLLDYEPEKEEDNLKVAIIGKPNAGKSSLFNSIVGSDRSLVTEIPGTTRDMVDET 223
Query: 210 TDYKYLRYQVIDTPGILDRPFEDRNIIEMCSIT-ALAHLRSAVLFFLDISGSCGYSIAQQ 268
+ + IDT G+ + +E S+ A+ + + + L I + G S Q
Sbjct: 224 IEIDGMPVTFIDTAGMRRKSKVGVKNVEYYSVMRAVDAIERSDICILVIDATLGISNQDQ 283
Query: 269 --AALFHSIKSLFMNKPLIIVCNKTDL 293
A L K +I V NK+DL
Sbjct: 284 RIAGLVEK-----RGKGIITVFNKSDL 305
>sp|Q72HR4|OBG_THET2 GTPase obg OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 /
DSM 7039) GN=obg PE=3 SV=1
Length = 416
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDY-KYLRYQVIDTPGILDRPFE 231
+ GYPN GKSS + +TRA + PY FTT S +G + + R+ + D PGI++ E
Sbjct: 162 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASE 221
Query: 232 DRNIIEMCSITALAHL-RSAVLFF-LDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCN 289
+ + + L H+ R+ VL + LD + ++ + + +P ++ N
Sbjct: 222 GKGL----GLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVALN 277
Query: 290 KTDL 293
K DL
Sbjct: 278 KVDL 281
>sp|Q89WP4|MNME_BRAJA tRNA modification GTPase MnmE OS=Bradyrhizobium japonicum (strain
USDA 110) GN=mnmE PE=3 SV=1
Length = 452
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 46/235 (19%)
Query: 81 DLLHVLYNKDHYKLALGQI-----NTARNL------ISKIAKDYVKLLKYGDSLYRCKSL 129
DL+H ++ + AL Q+ N AR+ S + + + GD ++
Sbjct: 132 DLIHADTDR-QRRQALRQLQGLLGNRARDWRERIIEASALIEAGIDFSDEGDVPAELRAP 190
Query: 130 KVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGKSSFMNKIT 189
V A+ + + + + + E++R M + I G PNVGKS+ MN++
Sbjct: 191 AVKAIKALHVEITEVLAAQGHSERLRDGM-----------VVAIAGEPNVGKSTLMNQLA 239
Query: 190 RADVD-VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGI--LDRPFEDRNIIEMCSITALAH 246
R DV V P+A TT+ + D VIDT GI D P E + + A
Sbjct: 240 RRDVAIVSPHAGTTRDVIEVQLDLDGYPVTVIDTAGIRETDDPVEQEGVRRARARAEDAD 299
Query: 247 LRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMN--------KPLIIVCNKTDL 293
L VL+ ++ +QAA S++SL+ + + IV NK DL
Sbjct: 300 L---VLWLVE---------GEQAADPASMRSLWTSGDGSHPSGGSVWIVRNKIDL 342
>sp|Q5SHE9|OBG_THET8 GTPase obg OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579) GN=obg PE=1 SV=1
Length = 416
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDY-KYLRYQVIDTPGILDRPFE 231
+ GYPN GKSS + +TRA + PY FTT S +G + + R+ + D PGI++ E
Sbjct: 162 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASE 221
Query: 232 DRNIIEMCSITALAHL-RSAVLFF-LDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCN 289
+ + + L H+ R+ VL + LD + ++ + + +P ++ N
Sbjct: 222 GKGL----GLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVALN 277
Query: 290 KTDL 293
K DL
Sbjct: 278 KVDL 281
>sp|Q5QYB3|DER_IDILO GTPase Der OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM
15497 / L2-TR) GN=der PE=3 SV=1
Length = 479
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 171 ILICGYPNVGKSSFMNKITRA-DVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
+ + G PNVGKS+ N++TR D V + T+ G +Y ++ VIDT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVIDTGGI--HG 62
Query: 230 FEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCN 289
E+ EM + LA + V+ F+ + G ++ QA H K NK + +VCN
Sbjct: 63 DEEGIDEEMAKQSLLAVDEADVVLFM-VDARDGVTVGDQAIADHLRKQ---NKKVYLVCN 118
Query: 290 KTD 292
K D
Sbjct: 119 KID 121
>sp|Q15R60|DER_PSEA6 GTPase Der OS=Pseudoalteromonas atlantica (strain T6c / ATCC
BAA-1087) GN=der PE=3 SV=1
Length = 482
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 171 ILICGYPNVGKSSFMNKITRA-DVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
+ + G PNVGKS+ N++TR D V + T+ G +Y+ L++ V+DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI---S 61
Query: 230 FEDRNI-IEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVC 288
+++ I + M + + +A + V+ FL + G + A Q H K NK + +V
Sbjct: 62 GDEQGIDMAMANQSLMAIDEADVVLFL-VDARAGLTAADQGIAEHLRKQ---NKSVYVVA 117
Query: 289 NKTD 292
NK D
Sbjct: 118 NKVD 121
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 171 ILICGYPNVGKSSFMNKI---TRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
+ I G PNVGKS+ N+I R V QP T S+F+ + Y +IDT G+
Sbjct: 197 LAIVGKPNVGKSTLTNRILGEERVVVYDQP-GTTRDSIFI-PMERDDREYVLIDTAGVRR 254
Query: 228 RPFEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIV 287
R + + + L + A + L I G + + L + S + L++
Sbjct: 255 RRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGVTDQDLSLLGFVLNS---GRSLVVA 311
Query: 288 CNKTD 292
NK D
Sbjct: 312 VNKWD 316
>sp|B2UQ30|OBG_AKKM8 GTPase obg OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=obg
PE=3 SV=2
Length = 350
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVI-DTPGILDRPFE 231
+ GYPN GKS+ + I+ A V Y FTT +G ++ R V+ D PGI++
Sbjct: 180 LVGYPNAGKSTLLGDISEAKPKVASYPFTTLQPIIGVVEFDSFRRCVVADIPGIIEGAHN 239
Query: 232 DRNIIEMCSITALAHL-RSAVL-FFLDISGSCGYS-IAQQAALFHSIK---SLFMNKPLI 285
+R + L H+ R VL F LD++GS G I L IK +P
Sbjct: 240 NRGL----GHEFLRHITRCKVLVFVLDMAGSEGRDPIEDLQNLRTEIKLYSEDLAKQPWF 295
Query: 286 IVCNKTDL 293
+V NK DL
Sbjct: 296 VVANKMDL 303
>sp|Q821L7|DER_CHLCV GTPase Der OS=Chlamydophila caviae (strain GPIC) GN=der PE=3 SV=1
Length = 474
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 171 ILICGYPNVGKSSFMNKI-TRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
I I G PNVGKSS N++ R+ V TT+ G + QVIDT G+ D+
Sbjct: 4 IAILGRPNVGKSSLFNRMCKRSLAIVNSQEGTTRDRLYGEIRGWSVPVQVIDTGGV-DKD 62
Query: 230 FEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCN 289
ED + + ALA A + L + CG + Q A L + L +NKPLI+V N
Sbjct: 63 SED-HFQKHIYKQALAGANEADILLLVVDIRCGIT-EQDAELAKML--LPLNKPLILVAN 118
Query: 290 KTD 292
K D
Sbjct: 119 KAD 121
>sp|P53295|RBG2_YEAST Ribosome-interacting GTPase 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RBG2 PE=1 SV=1
Length = 368
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 167 NTRTILICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
+ R +LI GYP+VGKSS + KIT ++ YAFTT + G Y+ Q++D PGI+
Sbjct: 63 DARVVLI-GYPSVGKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKYQGAEIQIVDLPGII 121
Query: 227 DRPFEDRNIIEMCSITALAHLRSAVLFFLDISGS 260
+ + + A A VL LD + S
Sbjct: 122 YGASQGKG--RGRQVVATARTADLVLMVLDATKS 153
>sp|Q7NHT3|MNME_GLOVI tRNA modification GTPase MnmE OS=Gloeobacter violaceus (strain PCC
7421) GN=mnmE PE=3 SV=1
Length = 453
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 144 IGPSLAYLEQIRQHMARLPSIDPNTRTILICGYPNVGKSSFMNKITRAD-VDVQPYAFTT 202
IG SLA+ ++ R + + + I G PNVGKSS +N +R D V TT
Sbjct: 195 IGQSLAHARRLMATSTRGELLRTGLK-VAIVGRPNVGKSSLLNAWSRTDRAIVTDLPGTT 253
Query: 203 KSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSIT-ALAHLRSAVLFFLDISGSC 261
+ + + + + QV+DT GI E + +E I + A R A L L I +
Sbjct: 254 RDVVESMLNVQGIPVQVLDTAGI----REATDTVERIGIERSHAAAREADLVLLVIDRTE 309
Query: 262 GYSIAQQAALFHSIKSLFMNKPLIIVCNKTDL 293
G++ A + +F ++ +P+I+V NK+DL
Sbjct: 310 GWTCA-DSDIFAQVR----ERPVIVVVNKSDL 336
>sp|A4SNZ8|DER_AERS4 GTPase Der OS=Aeromonas salmonicida (strain A449) GN=der PE=3 SV=1
Length = 499
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 168 TRTILICGYPNVGKSSFMNKITRA-DVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
T + + G PNVGKS+ N++TR D V + T+ G L + V+DT GI
Sbjct: 2 TPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGGI- 60
Query: 227 DRPFEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLII 286
E+ ++M + LA + V+ F+ + G + A QA H K+ +K + +
Sbjct: 61 -DGTEEGIELKMAEQSLLAIEEADVVLFM-VDARAGLTAADQAIAAHLRKT---HKKVFL 115
Query: 287 VCNKTD 292
V NKTD
Sbjct: 116 VANKTD 121
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 173 ICGYPNVGKSSFMNKITRAD-VDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFE 231
I G PNVGKS+ N++ D V V TT+ + +Y VIDT G+ R
Sbjct: 217 IVGRPNVGKSTLTNRMLGEDRVIVYDMPGTTRDSVYVPMERDEQKYVVIDTAGVRRRGKV 276
Query: 232 DRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVCNKT 291
+ + I L + A + L I + + L + S + +++V NK
Sbjct: 277 HETVEKFSVIKTLKAIEDANVCLLVIDAQETITDQDLSILGFVLHS---GRSVVLVVNKW 333
Query: 292 D 292
D
Sbjct: 334 D 334
>sp|Q8KPU2|MNME_SYNE7 tRNA modification GTPase MnmE OS=Synechococcus elongatus (strain
PCC 7942) GN=mnmE PE=3 SV=3
Length = 462
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 171 ILICGYPNVGKSSFMNKITRAD-VDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
I I G PNVGKSS +N +R D V TT+ L + QV+DT GI
Sbjct: 226 IAIVGRPNVGKSSLLNAWSRCDRAIVTDLPGTTRDLVESQLIVGGIPVQVLDTAGI---- 281
Query: 230 FEDRNIIEMCSIT-ALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIIVC 288
E + +E + + +SA L L I S G+S Q +I ++P+++V
Sbjct: 282 RETSDQVEQIGVERSRRAAQSADLVLLTIDASAGWSAEDQ-----TIWEAVSDRPILLVI 336
Query: 289 NKTD 292
NK D
Sbjct: 337 NKRD 340
>sp|A5E8G7|MNME_BRASB tRNA modification GTPase MnmE OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=mnmE PE=3 SV=1
Length = 445
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 144 IGPSLAYLEQIRQHMARLPSIDPNTR------TILICGYPNVGKSSFMNKITRADVD-VQ 196
I P+LA++ Q+ + + + T++I G PN GKS+ MN++ R +V V
Sbjct: 188 IAPALAWIRQLLAEIEEVLAAQGRAERLRDGLTVVIAGPPNAGKSTLMNQLARREVAIVS 247
Query: 197 PYAFTTKSLFVGHTDYKYLRYQVIDTPGI--LDRPFEDRNI 235
P+A TT+ L D VIDT GI D P E +
Sbjct: 248 PHAGTTRDLIEVALDLDGYPVTVIDTAGIRQTDDPVEQEGV 288
>sp|A0KJ48|DER_AERHH GTPase Der OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC
7966 / NCIB 9240) GN=der PE=3 SV=1
Length = 499
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 168 TRTILICGYPNVGKSSFMNKITRA-DVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
T + + G PNVGKS+ N++TR D V + T+ G L + V+DT GI
Sbjct: 2 TPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGGI- 60
Query: 227 DRPFEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLII 286
E+ ++M + LA + V+ F+ + G + A QA H K+ +K + +
Sbjct: 61 -DGTEEGIELKMAEQSLLAIEEADVVLFM-VDARAGLTAADQAIAEHLRKT---HKKVFL 115
Query: 287 VCNKTD 292
V NKTD
Sbjct: 116 VANKTD 121
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 173 ICGYPNVGKSSFMNKITRAD-VDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFE 231
I G PNVGKS+ N++ D V V TT+ + +Y +IDT G+ R
Sbjct: 217 IVGRPNVGKSTLTNRMLGEDRVIVYDMPGTTRDSVYIPMERDEQKYVIIDTAGVRRRGKV 276
Query: 232 DRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSLFMN--KPLIIVCN 289
+ + I L + A + L I +I Q SI +N + +++V N
Sbjct: 277 HETVEKFSVIKTLKAIEDANVCLLVIDAQ--ETITDQDL---SILGFVLNTGRSVVLVVN 331
Query: 290 KTD 292
K D
Sbjct: 332 KWD 334
>sp|A4XHX9|DER_CALS8 GTPase Der OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=der PE=3 SV=2
Length = 439
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 170 TILICGYPNVGKSSFMNKIT---RADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
T+ I G PNVGKS+ N++ RA VD P T+ VG T+++ + + VIDT GI
Sbjct: 4 TVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIVGETEWRGITFNVIDTGGI- 60
Query: 227 DRPFEDRNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSIKSL-----FMN 281
P+ + I L +R F +D+S + + + L + + +
Sbjct: 61 -EPYSEDII--------LKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRVSK 111
Query: 282 KPLIIVCNKTD 292
KP+++ NK D
Sbjct: 112 KPIVLAVNKID 122
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 163 SIDPNTRTILICGYPNVGKSSFMNKITRAD-VDVQPYAFTTKSLFVGHTDYKYLRYQVID 221
I+ ++ + I G PN GKSS +N I + V V TT+ + +++ + +ID
Sbjct: 170 EIEEDSIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSYVEFEGIPLTLID 229
Query: 222 TPGI 225
T G+
Sbjct: 230 TAGL 233
>sp|B9K736|OBG_THENN GTPase obg OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359
/ NS-E) GN=obg PE=3 SV=1
Length = 438
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232
+ GYPNVGKSS + +I+ A + Y FTT +G Y + V D PG+++ E
Sbjct: 169 LVGYPNVGKSSLIARISNARPKIANYPFTTLVPNLGVVKYGDFSFVVADIPGLIEGASEG 228
Query: 233 RNI-------IEMCSITALAHLRSAVLFFLDISG------SCGYSIAQQAALFHSIKSLF 279
+ +E C + ++ LD+SG + Y I ++ +S
Sbjct: 229 VGLGNVFLRHVERCFV---------IVHMLDVSGFEREDPARDYFIIREEMKKYS--PFL 277
Query: 280 MNKPLIIVCNKTDL 293
+ KP I+V NK DL
Sbjct: 278 LEKPEIVVANKIDL 291
>sp|Q9PJX7|OBG_CHLMU GTPase obg OS=Chlamydia muridarum (strain MoPn / Nigg) GN=obg PE=3
SV=1
Length = 335
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 171 ILICGYPNVGKSSFMNKITRADVDVQPYAFTT--KSLFVGHTD-YKYLR-YQVIDTPGIL 226
I + G+PN GKS+ N + R +V V Y FTT SL + H + Y Y + + + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGYLYQKPWIMADIPGII 220
Query: 227 DRPFEDRNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQQAAL----FHSIKSLFM 280
+ ++R + + L H+ +LF +DISG S + + + K
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVVDISGIERSSPEKDLQILIGELLAYKEDLK 276
Query: 281 NKPLIIVCNKTD 292
NK ++I NK D
Sbjct: 277 NKSMVIALNKID 288
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,752,234
Number of Sequences: 539616
Number of extensions: 4172730
Number of successful extensions: 18588
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 1688
Number of HSP's that attempted gapping in prelim test: 17085
Number of HSP's gapped (non-prelim): 2836
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)