BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040158
(430 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/432 (54%), Positives = 302/432 (69%), Gaps = 3/432 (0%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ DRS GD+AS YH YKED++LMK +G+D++RFSISWTRILP G + GGVN G+K+Y
Sbjct: 73 KIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYY 132
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N+LINELL+ ++PF+TL H+D PQALE++Y GFLSP I+ DF DY + CFK +GDRVK
Sbjct: 133 NNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKN 192
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYV-GNCTAGDSATEPYIAAHTMLLSHEALVNLY 179
W + NEP NGY G FAPGRCS + GNC+ GDS EPY A H LL+H V LY
Sbjct: 193 WITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLY 252
Query: 180 KHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRR 239
K KYQ QKGKIGIT+++HWF P ++ DF FGWF DP+ G+YP SMR
Sbjct: 253 KAKYQALQKGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRG 312
Query: 240 IVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERD 299
+VG RLP+FT+ +S LVKG+FDF+ +NYYT NYAD PP N SYT D + NLT R+
Sbjct: 313 LVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRN 372
Query: 300 GVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD--DASLPLKVALKDS 357
G+P+G A WL+V+P+G ++ NPT+YITENG+ + + +LPL+ ALKD
Sbjct: 373 GIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDD 432
Query: 358 MRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYL 417
RI Y H HL LL AI++G NVK Y+ W+ D+FEW GYTVRFGI +VD+ + +RY
Sbjct: 433 ARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYP 492
Query: 418 KYSAYWFKMFLL 429
K SA+WFK FLL
Sbjct: 493 KNSAHWFKKFLL 504
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/432 (53%), Positives = 301/432 (69%), Gaps = 5/432 (1%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ DR+ GD+A YH YKEDI +MK + LD++RFSISW R+LPKGK+SGGVN G+ +Y
Sbjct: 58 KIKDRTNGDVAIDEYHRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYY 117
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N+LINE+LAN ++P+VTL H+D PQALE+EY GFL IV DF DY + CFK +GDRVK
Sbjct: 118 NNLINEVLANGMQPYVTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKH 177
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHTMLLSHEALVNLY 179
W ++NEP G+ MN Y G+FAPGRCS+++ NCT GDS EPY+AAH LL+H A LY
Sbjct: 178 WITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLY 237
Query: 180 KHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRR 239
K KYQ Q G IGIT+++HWFEP K DF GWF P+T G YPESMR
Sbjct: 238 KTKYQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRY 297
Query: 240 IVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPP-PNAFQLSYTADRQVNLTTER 298
+V KRLPKF+ ES + GSFDFL +NYY++ YA AP PNA + + D +N T E
Sbjct: 298 LVRKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNA-RPAIQTDSLINATFEH 356
Query: 299 DGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD--DASLPLKVALKD 356
+G P+G A WL ++P+G+++ NNP IYITENG + D +L L+ +L D
Sbjct: 357 NGKPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLD 416
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
+ RI Y + HL Y+L AI +GVNVK Y+ W+ +D+ EWD+GYTVRFG+ +VDFKN+L+R+
Sbjct: 417 TPRIDYYYRHLYYVLTAIGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRH 476
Query: 417 LKYSAYWFKMFL 428
K SA+WFK FL
Sbjct: 477 PKLSAHWFKSFL 488
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 276/430 (64%), Gaps = 7/430 (1%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ D S G+ A YH YKEDIK+MK+ GL+S+RFSISW+R+LP G+++ GVN GVKFY
Sbjct: 82 KISDGSNGNQAINCYHMYKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFY 141
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+D I+ELLAN IKP VTL H+D PQALE+EYGGFLS +IV DF +Y +FCF +GD++K
Sbjct: 142 HDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKY 201
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP+ +NGY G FAPGR G GD A EPY+ H +LL+H+A V Y+
Sbjct: 202 WTTFNEPHTFAVNGYALGEFAPGRG----GKGDEGDPAIEPYVVTHNILLAHKAAVEEYR 257
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+K+Q Q+G+IGI + + W EP DF GWF +P+T G+YP+SMR +
Sbjct: 258 NKFQKCQEGEIGIVLNSMWMEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMREL 317
Query: 241 VGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDG 300
V RLPKF+ +S +KG +DF+ +NYYT Y A N+ +LSY D QV T ER+
Sbjct: 318 VKGRLPKFSADDSEKLKGCYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQ 377
Query: 301 VPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADD--ASLPLKVALKDSM 358
P+G GW V P GL + + P +Y+TE+G+ ++ + L A +D+
Sbjct: 378 KPIGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAE 437
Query: 359 RIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLK 418
R Y HL + AI +GVNVK Y++W+F+D+FEW+ GY R+GI +VD+K+ RY K
Sbjct: 438 RTDYHQKHLASVRDAIDDGVNVKGYFVWSFFDNFEWNLGYICRYGIIHVDYKS-FERYPK 496
Query: 419 YSAYWFKMFL 428
SA W+K F+
Sbjct: 497 ESAIWYKNFI 506
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 282/442 (63%), Gaps = 23/442 (5%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
+ GD+A YH YKED+ ++K +GLD++RFSISW+R+LP G++SGGVN G+ +YN+LI+
Sbjct: 66 TNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLID 125
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LLAN IKPFVTL H+D PQALE+EYGGFLSP+IV DF +Y + CF +GDRVK W ++N
Sbjct: 126 GLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLN 185
Query: 126 EPNGMVMNGYNGGSFAPG----------------RCSNYVGN--CTAGDSATEPYIAAHT 167
EP ++GY G +APG RCS C+ G+ TEPY H
Sbjct: 186 EPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHH 245
Query: 168 MLLSHEALVNLYKHKYQPYQKGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGWFAD 226
+LL+H A V LYK+K+Q Q+G+IGI+ T W EP + DF GWF +
Sbjct: 246 LLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFME 305
Query: 227 PVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAP--PPNAFQL 284
P+T G+YP+SM++ VG RLPKF+ +S ++KGS+DF+ +NYYT +Y A +
Sbjct: 306 PITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNF 365
Query: 285 SYTADRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD 344
SY D V T+R+GVP+G + WL ++P+G+++ N P IY+TENG+ D
Sbjct: 366 SYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDD 425
Query: 345 --DASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRF 402
+ +L L A KDSMR++YL H+ + +A+ +GVNVK Y+ W+ D+FEW GY VRF
Sbjct: 426 VKNTNLTLSEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRF 485
Query: 403 GITYVDFKNHLRRYLKYSAYWF 424
GI ++D+ ++ RY K SA W
Sbjct: 486 GIIHIDYNDNFARYPKDSAVWL 507
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 282/442 (63%), Gaps = 23/442 (5%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
+ GD+A YH YKED+ ++K +GLD++RFSISW+R+LP G++SGGVN G+ +YN+LI+
Sbjct: 66 TNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLID 125
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LLAN IKPFVTL H+D PQALE+EYGGFLSP+IV DF +Y + CF +GDRVK W ++N
Sbjct: 126 GLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLN 185
Query: 126 EPNGMVMNGYNGGSFAPG----------------RCSNYVGN--CTAGDSATEPYIAAHT 167
EP ++GY G +APG RCS C+ G+ TEPY H
Sbjct: 186 EPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHH 245
Query: 168 MLLSHEALVNLYKHKYQPYQKGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGWFAD 226
+LL+H A V LYK+K+Q Q+G+IGI+ T W EP + DF GWF +
Sbjct: 246 LLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFME 305
Query: 227 PVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAP--PPNAFQL 284
P+T G+YP+SM++ VG RLPKF+ +S ++KGS+DF+ +NYYT +Y A +
Sbjct: 306 PITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNF 365
Query: 285 SYTADRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD 344
SY D V T+R+GVP+G + WL ++P+G+++ N P IY+TENG+ D
Sbjct: 366 SYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDD 425
Query: 345 --DASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRF 402
+ +L L A KDSMR++YL H+ + +A+ +GVNVK Y+ W+ D+FEW GY VRF
Sbjct: 426 VKNTNLTLSEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRF 485
Query: 403 GITYVDFKNHLRRYLKYSAYWF 424
GI ++D+ ++ RY K SA W
Sbjct: 486 GIIHIDYNDNFARYPKDSAVWL 507
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 397 bits (1019), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 282/442 (63%), Gaps = 23/442 (5%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
+ GD+A YH YKED+ ++K +GLD++RFSISW+R+LP G++SGGVN G+ +YN+LI+
Sbjct: 66 TNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLID 125
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LLAN IKPFVTL H+D PQALE+EYGGFLSP+IV DF +Y + CF +GDRVK W ++N
Sbjct: 126 GLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLN 185
Query: 126 EPNGMVMNGYNGGSFAPG----------------RCSNYVGN--CTAGDSATEPYIAAHT 167
+P ++GY G +APG RCS C+ G+ TEPY H
Sbjct: 186 QPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHH 245
Query: 168 MLLSHEALVNLYKHKYQPYQKGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGWFAD 226
+LL+H A V LYK+K+Q Q+G+IGI+ T W EP + DF GWF +
Sbjct: 246 LLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFME 305
Query: 227 PVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAP--PPNAFQL 284
P+T G+YP+SM++ VG RLPKF+ +S ++KGS+DF+ +NYYT +Y A +
Sbjct: 306 PITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNF 365
Query: 285 SYTADRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD 344
SY D V T+R+GVP+G + WL ++P+G+++ N P IY+TENG+ D
Sbjct: 366 SYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDD 425
Query: 345 --DASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRF 402
+ +L L A KDSMR++YL H+ + +A+ +GVNVK Y+ W+ D+FEW GY VRF
Sbjct: 426 VKNTNLTLSEARKDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRF 485
Query: 403 GITYVDFKNHLRRYLKYSAYWF 424
GI ++D+ ++ RY K SA W
Sbjct: 486 GIIHIDYNDNFARYPKDSAVWL 507
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/435 (43%), Positives = 273/435 (62%), Gaps = 10/435 (2%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ D S D+A YH ++EDI+LM +G+D++RFSI+W+RI P G G VN G+ Y
Sbjct: 55 KITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNG--VGQVNQAGIDHY 112
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N LI+ LLA I+P+VTL H+D PQALE++Y G+L +IV DF Y + CF+ +GDRVK
Sbjct: 113 NKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKH 172
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHTMLLSHEALVNLY 179
W ++NEP+ + + GY+ G APGRCS + C AG+S TEPY+ AH +L+H A ++Y
Sbjct: 173 WITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIY 232
Query: 180 KHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRR 239
+ KY+ Q G++GI WFEP T +F GWFADP FG+YP +MR
Sbjct: 233 RTKYKATQNGQLGIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRA 292
Query: 240 IVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYA--DAAPPPNAFQLSYTADRQVNLTTE 297
VG+RLP+FT E+ +VKG+ DF+ +N+YTT Y + + AD
Sbjct: 293 RVGERLPRFTADEAAVVKGALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPF 352
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLP---LKVAL 354
++G P+G WL++ P+G++ N+P +YITENG+ DD++ P +K AL
Sbjct: 353 KNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGM-DDSNNPFISIKDAL 411
Query: 355 KDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHL 413
KDS RI+Y + +L L +IKE G +V+ Y+ W+ D++EW AGY+ RFG+ +VD+K++L
Sbjct: 412 KDSKRIKYHNDYLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNL 471
Query: 414 RRYLKYSAYWFKMFL 428
+RY K S WFK L
Sbjct: 472 KRYPKNSVQWFKALL 486
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/424 (44%), Positives = 258/424 (60%), Gaps = 8/424 (1%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +YN+LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTAG-DSATEPYIAAHTMLLSHEALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C AG +SATEPYI AH LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR 244
Q+GK+GI + +W+E + DF GW+ DP+ G+YP+ M+ +V R
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDR 296
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVG 304
LPKFT ++ LVKGS D++ +N YT +Y SY+AD QV ++G P+G
Sbjct: 297 LPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIG 356
Query: 305 SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLH 364
WL++ P G+ NPT+ ITENG+ A+L L+D+ R+ +
Sbjct: 357 PQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYR 416
Query: 365 SHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWF 424
S+L L KAI EG NV Y+ W+ D+FEW +GYT +FGI YVDF N L R+ K SAYWF
Sbjct: 417 SYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWF 475
Query: 425 KMFL 428
+ L
Sbjct: 476 RDML 479
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 258/424 (60%), Gaps = 8/424 (1%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +YN+LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTAG-DSATEPYIAAHTMLLSHEALVNLYKHKYQ 184
+P + + GY+ G+ P RC+ C AG +SATEPYI AH LLSH A V Y+ KYQ
Sbjct: 181 QPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR 244
Q+GK+GI + +W+E + DF GW+ DP+ G+YP+ M+ +V R
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDR 296
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVG 304
LPKFT ++ LVKGS D++ +N YT +Y SY+AD QV ++G P+G
Sbjct: 297 LPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIG 356
Query: 305 SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLH 364
WL++ P G+ NPT+ ITENG+ A+L L+D+ R+ +
Sbjct: 357 PQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYR 416
Query: 365 SHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWF 424
S+L L KAI EG NV Y+ W+ D+FEW +GYT +FGI YVDF N L R+ K SAYWF
Sbjct: 417 SYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWF 475
Query: 425 KMFL 428
+ L
Sbjct: 476 RDML 479
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 257/424 (60%), Gaps = 8/424 (1%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +YN+LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTAG-DSATEPYIAAHTMLLSHEALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C AG +SATEPYI AH LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR 244
Q+GK+GI + +W+E + DF GW+ DP+ G+YP+ M+ +V R
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDR 296
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVG 304
LPKFT ++ LVKGS D++ +N YT +Y SY+AD QV ++G P+G
Sbjct: 297 LPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIG 356
Query: 305 SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLH 364
WL++ P G+ NPT+ IT NG+ A+L L+D+ R+ +
Sbjct: 357 PQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITSNGMDQPANLSRDQYLRDTTRVHFYR 416
Query: 365 SHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWF 424
S+L L KAI EG NV Y+ W+ D+FEW +GYT +FGI YVDF N L R+ K SAYWF
Sbjct: 417 SYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWF 475
Query: 425 KMFL 428
+ L
Sbjct: 476 RDML 479
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 257/424 (60%), Gaps = 8/424 (1%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +YN+LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTAG-DSATEPYIAAHTMLLSHEALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C AG +SATEPYI AH LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR 244
Q+GK+GI + +W+E + DF GW+ DP+ G+YP+ M+ +V R
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDR 296
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVG 304
LPKFT ++ LVKGS D++ +N YT +Y SY+AD QV ++G P+G
Sbjct: 297 LPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIG 356
Query: 305 SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLH 364
WL++ P G+ NPT+ IT NG+ A+L L+D+ R+ +
Sbjct: 357 PQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITANGMDQPANLSRDQYLRDTTRVHFYR 416
Query: 365 SHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWF 424
S+L L KAI EG NV Y+ W+ D+FEW +GYT +FGI YVDF N L R+ K SAYWF
Sbjct: 417 SYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWF 475
Query: 425 KMFL 428
+ L
Sbjct: 476 RDML 479
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 257/424 (60%), Gaps = 8/424 (1%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +YN+LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTAG-DSATEPYIAAHTMLLSHEALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C AG +SATEPYI AH LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR 244
Q+GK+GI + +W+E + DF GW+ DP+ G+YP+ M+ +V R
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDR 296
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVG 304
LPKFT ++ LVKGS D++ +N YT +Y SY+AD QV ++G P+G
Sbjct: 297 LPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNGKPIG 356
Query: 305 SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLH 364
WL++ P G+ NPT+ IT NG+ A+L L+D+ R+ +
Sbjct: 357 PQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYR 416
Query: 365 SHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWF 424
S+L L KAI EG NV Y+ W+ D+FEW +GYT +FGI YVDF N L R+ K SAYWF
Sbjct: 417 SYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWF 475
Query: 425 KMFL 428
+ L
Sbjct: 476 RDML 479
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 257/424 (60%), Gaps = 8/424 (1%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +YN+LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTAG-DSATEPYIAAHTMLLSHEALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C AG +SATEPYI AH LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR 244
Q+GK+GI + +W+E + DF GW+ DP+ G+YP+ M+ +V R
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDR 296
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVG 304
LPKFT ++ LVKGS D++ +N YT +Y SY+AD QV ++G P+G
Sbjct: 297 LPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIG 356
Query: 305 SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLH 364
WL++ P G+ NPT+ IT NG+ A+L L+D+ R+ +
Sbjct: 357 PQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYR 416
Query: 365 SHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWF 424
S+L L KAI EG NV Y+ W+ D+FEW +GYT +FGI YVDF N L R+ K SAYWF
Sbjct: 417 SYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWF 475
Query: 425 KMFL 428
+ L
Sbjct: 476 RDML 479
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/424 (44%), Positives = 256/424 (60%), Gaps = 8/424 (1%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +YN+LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTAG-DSATEPYIAAHTMLLSHEALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C AG +SATEPYI AH LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR 244
Q+GK+GI + +W+E + DF GW+ DP+ G+YP+ M+ +V R
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDR 296
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVG 304
LPKFT ++ LVKGS D++ +N YT +Y SY AD QV ++G P+G
Sbjct: 297 LPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNGKPIG 356
Query: 305 SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLH 364
WL++ P G+ NPT+ IT NG+ A+L L+D+ R+ +
Sbjct: 357 PQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLSRDQYLRDTTRVHFYR 416
Query: 365 SHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWF 424
S+L L KAI EG NV Y+ W+ D+FEW +GYT +FGI YVDF N L R+ K SAYWF
Sbjct: 417 SYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWF 475
Query: 425 KMFL 428
+ L
Sbjct: 476 RDML 479
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 353 bits (905), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/431 (41%), Positives = 253/431 (58%), Gaps = 6/431 (1%)
Query: 2 MFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYN 61
+ DRS GD+A+ YH Y ED++L+K++G+D++RFSISW RILPKG ++GG+N GV++YN
Sbjct: 116 IVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYN 175
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
LI+ LL N I+P++T+ H+D PQAL E YGGFL +I+KD+ D+ CF+ +G VK W
Sbjct: 176 KLIDLLLENGIEPYITIFHWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNW 235
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT-AGDSATEPYIAAHTMLLSHEALVNLYK 180
+ N+P Y G APGRCS V G+S +EPYI AH +L +H V++Y
Sbjct: 236 LTFNDPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY- 294
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+KY G+IG+ + P T D GWF +PV G+YP SMR
Sbjct: 295 NKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVS 354
Query: 241 VGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAP-PPNAFQLSYTADRQVNLTTE-R 298
R+P F E E + GS+D + +NYYT+ ++ PN + T D + T+
Sbjct: 355 ARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGP 414
Query: 299 DGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA--DDASLPLKVALKD 356
DG +G PT W+ ++PKGL + NP +YITENG+ D LP VAL+D
Sbjct: 415 DGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALED 474
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
R+ Y+ HL L ++I G +V+ Y+ W+ D+FEW +GYT RFGI YVD +N R
Sbjct: 475 HTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERT 534
Query: 417 LKYSAYWFKMF 427
+K SA W + F
Sbjct: 535 MKRSARWLQEF 545
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 351 bits (900), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 178/431 (41%), Positives = 253/431 (58%), Gaps = 6/431 (1%)
Query: 2 MFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYN 61
+ DRS GD+A+ YH Y ED++L+K++G+D++RFSISW RILPKG ++GG+N V++YN
Sbjct: 116 IVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYN 175
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
LI+ LL N I+P++T+ H+D PQAL + YGGFL +I+KD+ D+ CF+ +G +VK W
Sbjct: 176 KLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNW 235
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT-AGDSATEPYIAAHTMLLSHEALVNLYK 180
+ NEP Y G APGRCS V G+S +EPYI AH +L +H V++Y
Sbjct: 236 LTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY- 294
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+KY G+IG+ + P T D GWF +PV G+YP SMR
Sbjct: 295 NKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVS 354
Query: 241 VGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAP-PPNAFQLSYTADRQVNLTTE-R 298
R+P F E E + GS+D + +NYYT+ ++ PN + T D + T+
Sbjct: 355 ARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGP 414
Query: 299 DGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA--DDASLPLKVALKD 356
DG +G PT W+ ++PKGL + NP +YITENG+ D LP VAL+D
Sbjct: 415 DGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALED 474
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
R+ Y+ HL L ++I G +V+ Y+ W+ D+FEW +GYT RFGI YVD +N R
Sbjct: 475 HTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERT 534
Query: 417 LKYSAYWFKMF 427
+K SA W + F
Sbjct: 535 MKRSARWLQEF 545
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 350 bits (897), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/431 (41%), Positives = 252/431 (58%), Gaps = 6/431 (1%)
Query: 2 MFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYN 61
+ DRS GD+A+ YH Y ED++L+K++G+D++RFSISW RILPKG ++GG+N V++YN
Sbjct: 116 IVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYN 175
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
LI+ LL N I+P++T+ H+D PQAL + YGGFL +I+KD+ D+ CF+ +G VK W
Sbjct: 176 KLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNW 235
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT-AGDSATEPYIAAHTMLLSHEALVNLYK 180
+ NEP Y G APGRCS V G+S +EPYI AH +L +H V++Y
Sbjct: 236 LTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY- 294
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+KY G+IG+ + P T D GWF +PV G+YP SMR
Sbjct: 295 NKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVS 354
Query: 241 VGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAP-PPNAFQLSYTADRQVNLTTE-R 298
R+P F E E + GS+D + +NYYT+ ++ PN + T D + T+
Sbjct: 355 ARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGP 414
Query: 299 DGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA--DDASLPLKVALKD 356
DG +G PT W+ ++PKGL + NP +YITENG+ D LP VAL+D
Sbjct: 415 DGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALED 474
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
R+ Y+ HL L ++I G +V+ Y+ W+ D+FEW +GYT RFGI YVD +N R
Sbjct: 475 HTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERT 534
Query: 417 LKYSAYWFKMF 427
+K SA W + F
Sbjct: 535 MKRSARWLQEF 545
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 257/441 (58%), Gaps = 19/441 (4%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 63 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 122
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
+LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 123 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 182
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHTMLLSHEAL 175
VK W + NEP Y G FAPGRCS + +C G+S EPY A H +LL+H
Sbjct: 183 VKNWLTFNEPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 241
Query: 176 VNLYKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPE 235
V+LY Y+ +IG+ P + D GWF +PV G+YP
Sbjct: 242 VDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPF 300
Query: 236 SMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYA---DAAP--PPNAFQLSYTADR 290
SMR + +RLP F + + + GS++ L +NYYT+ ++ D +P P A +
Sbjct: 301 SMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQ 360
Query: 291 QVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD----DA 346
+VN DG P+G P W++++P+GL++ NP IYITENG+ D +
Sbjct: 361 EVNGP---DGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKET 417
Query: 347 SLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITY 406
LP++ AL D R+ Y+ H+ L ++I G NV+ Y+ W+ D+FEW AG+T R+GI Y
Sbjct: 418 PLPMEAALNDYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVY 477
Query: 407 VDFKNHLRRYLKYSAYWFKMF 427
VD N+ RY+K SA W K F
Sbjct: 478 VDRNNNCTRYMKESAKWLKEF 498
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 257/441 (58%), Gaps = 19/441 (4%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 58 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 117
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
+LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 118 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 177
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHTMLLSHEAL 175
VK W + NEP Y G FAPGRCS + +C G+S EPY A H +LL+H
Sbjct: 178 VKNWLTFNEPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 236
Query: 176 VNLYKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPE 235
V+LY Y+ +IG+ P + D GWF +PV G+YP
Sbjct: 237 VDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPF 295
Query: 236 SMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYA---DAAP--PPNAFQLSYTADR 290
SMR + +RLP F + + + GS++ L +NYYT+ ++ D +P P A +
Sbjct: 296 SMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQ 355
Query: 291 QVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD----DA 346
+VN DG P+G P W++++P+GL++ NP IYITENG+ D +
Sbjct: 356 EVNGP---DGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKET 412
Query: 347 SLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITY 406
LP++ AL D R+ Y+ H+ L ++I G NV+ Y+ W+ D+FEW AG+T R+GI Y
Sbjct: 413 PLPMEAALNDYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVY 472
Query: 407 VDFKNHLRRYLKYSAYWFKMF 427
VD N+ RY+K SA W K F
Sbjct: 473 VDRNNNCTRYMKESAKWLKEF 493
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 338 bits (866), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 257/441 (58%), Gaps = 19/441 (4%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 63 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 122
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
+LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 123 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 182
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHTMLLSHEAL 175
VK W + N+P Y G FAPGRCS + +C G+S EPY A H +LL+H
Sbjct: 183 VKNWLTFNDPQTFTSVSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 241
Query: 176 VNLYKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPE 235
V+LY Y+ +IG+ P + D GWF +PV G+YP
Sbjct: 242 VDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPF 300
Query: 236 SMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYA---DAAP--PPNAFQLSYTADR 290
SMR + +RLP F + + + GS++ L +NYYT+ ++ D +P P A +
Sbjct: 301 SMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQ 360
Query: 291 QVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD----DA 346
+VN DG P+G P W++++P+GL++ NP IYITENG+ D +
Sbjct: 361 EVNGP---DGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKET 417
Query: 347 SLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITY 406
LP++ AL D R+ Y+ H+ L ++I G NV+ Y+ W+ D+FEW AG+T R+GI Y
Sbjct: 418 PLPMEAALNDYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVY 477
Query: 407 VDFKNHLRRYLKYSAYWFKMF 427
VD N+ RY+K SA W K F
Sbjct: 478 VDRNNNCTRYMKESAKWLKEF 498
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 337 bits (864), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 255/438 (58%), Gaps = 13/438 (2%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 63 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 122
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
+LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 123 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 182
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHTMLLSHEAL 175
VK W + N+P Y G FAPGRCS + +C G+S EPY A H +LL+H
Sbjct: 183 VKNWLTFNDPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 241
Query: 176 VNLYKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPE 235
V+LY Y+ +IG+ P + D GWF +PV G+YP
Sbjct: 242 VDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPF 300
Query: 236 SMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYA-DAAPPPNAFQLSYTADRQVNL 294
SMR + +RLP F + + + GS++ L +NYYT+ ++ + PN + T D +
Sbjct: 301 SMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQ 360
Query: 295 TTE-RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD----DASLP 349
DG P+G P W++++P+GL++ NP IYITENG+ D + LP
Sbjct: 361 EVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLP 420
Query: 350 LKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDF 409
++ AL D R+ Y+ H+ L ++I G NV+ Y+ W+ D+FEW AG+T R+GI YVD
Sbjct: 421 MEAALNDYKRLDYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDR 480
Query: 410 KNHLRRYLKYSAYWFKMF 427
N+ RY+K SA W K F
Sbjct: 481 NNNCTRYMKESAKWLKEF 498
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 335 bits (859), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 252/434 (58%), Gaps = 12/434 (2%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ D + GD+A+ YH Y+ED+K +K +G+ +RFSISW+RILP G +G VN G+ +Y
Sbjct: 113 RISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDG--TGKVNQAGIDYY 170
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N LIN L+ NDI P+VT+ H+D PQALE++YGGFL+ +IV D+ + + CFK +GDRVK
Sbjct: 171 NKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKN 230
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTA--GDSATEPYIAAHTMLLSHEALVNL 178
W + NEP+ Y G APGRCS + +C GDS EPY A H +LL+H V L
Sbjct: 231 WFTFNEPHTYCCFSYGEGIHAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQL 289
Query: 179 YKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMR 238
+K +Y + KIG+ +EP + D+ GWF +PV G+YP SMR
Sbjct: 290 FKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMR 349
Query: 239 RIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADR--QVNLTT 296
++G RLP FT+ E + S D + +NYYT+ ++ F + D + TT
Sbjct: 350 SLIGDRLPMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETT 409
Query: 297 ERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD---DASLPLKVA 353
DG +G T W++++PKGL + NP ++ITENG+AD D S+P
Sbjct: 410 GSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMP--DP 467
Query: 354 LKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHL 413
L D R+ YL H+ + AI +G +V+ ++ W D+FEW GY+ RFG+ Y+D +
Sbjct: 468 LDDWKRLDYLQRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGN 527
Query: 414 RRYLKYSAYWFKMF 427
+R LK SA WF F
Sbjct: 528 KRKLKKSAKWFSKF 541
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 333 bits (854), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/436 (41%), Positives = 255/436 (58%), Gaps = 12/436 (2%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDL 63
D GD + ++++DI ++ ++ +RFSI+W+RI+P+GK S GVN G+ +Y+ L
Sbjct: 63 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGL 122
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
I+ L+ I PFVTL H+D PQ L++EY GFL P+I+ DF DY D CF+ +GD VK W +
Sbjct: 123 ISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 182
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHTMLLSHEALVNLYKHK 182
+N+ + GY APGRCS V +C AG+S+TEPYI AH LL+H +V+LY+
Sbjct: 183 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 242
Query: 183 YQPYQKGKIGITILTHWFEPKFKT-XXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIV 241
Y +Q GKIG T++T WF P T +FF GWF P+T G YP+ M V
Sbjct: 243 YT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTV 301
Query: 242 GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPP-NAFQLSYTADRQVNLT-TERD 299
G+RLP F+ ES LVKGS+DFL +NYY T YA +P P N+ + D LT
Sbjct: 302 GERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINAS 361
Query: 300 GVPVG------SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVA 353
G +G + ++ +PKG+ NP IY+TENG++ +
Sbjct: 362 GHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQS 421
Query: 354 LKDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNH 412
+ D RI YL SHL +L K IKE VNVK Y W D++E++ G+TVRFG++Y+D+ N
Sbjct: 422 MLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNV 481
Query: 413 LRRYLKYSAYWFKMFL 428
R LK S W++ F+
Sbjct: 482 TDRDLKKSGQWYQTFI 497
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 251/434 (57%), Gaps = 12/434 (2%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ D + GD+A+ YH Y+ED+K +K +G+ +RFSISW+RILP G +G VN G+ +Y
Sbjct: 113 RISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDG--TGKVNQAGIDYY 170
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N LIN L+ NDI P+VT+ H+D PQALE++YGGFL+ +IV D+ + + CFK +GDRVK
Sbjct: 171 NKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKN 230
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTA--GDSATEPYIAAHTMLLSHEALVNL 178
W + N P+ Y G APGRCS + +C GDS EPY A H +LL+H V L
Sbjct: 231 WFTFNAPHTYCCFSYGEGIHAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQL 289
Query: 179 YKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMR 238
+K +Y + KIG+ +EP + D+ GWF +PV G+YP SMR
Sbjct: 290 FKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMR 349
Query: 239 RIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADR--QVNLTT 296
++G RLP FT+ E + S D + +NYYT+ ++ F + D + TT
Sbjct: 350 SLIGDRLPMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETT 409
Query: 297 ERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLAD---DASLPLKVA 353
DG +G T W++++PKGL + NP ++ITENG+AD D S+P
Sbjct: 410 GSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMP--DP 467
Query: 354 LKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHL 413
L D R+ YL H+ + AI +G +V+ ++ W D+FEW GY+ RFG+ Y+D +
Sbjct: 468 LDDWKRLDYLQRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGN 527
Query: 414 RRYLKYSAYWFKMF 427
+R LK SA WF F
Sbjct: 528 KRKLKKSAKWFSKF 541
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 333 bits (853), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/436 (41%), Positives = 255/436 (58%), Gaps = 12/436 (2%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDL 63
D GD + ++++DI ++ ++ +RFSI+W+RI+P+GK S GVN G+ +Y+ L
Sbjct: 65 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGL 124
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
I+ L+ I PFVTL H+D PQ L++EY GFL P+I+ DF DY D CF+ +GD VK W +
Sbjct: 125 ISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 184
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHTMLLSHEALVNLYKHK 182
+N+ + GY APGRCS V +C AG+S+TEPYI AH LL+H +V+LY+
Sbjct: 185 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 244
Query: 183 YQPYQKGKIGITILTHWFEPKFKT-XXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIV 241
Y +Q GKIG T++T WF P T +FF GWF P+T G YP+ M V
Sbjct: 245 YT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTV 303
Query: 242 GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPP-NAFQLSYTADRQVNLT-TERD 299
G+RLP F+ ES LVKGS+DFL +NYY T YA +P P N+ + D LT
Sbjct: 304 GERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINAS 363
Query: 300 GVPVG------SPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVA 353
G +G + ++ +PKG+ NP IY+TENG++ +
Sbjct: 364 GHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQS 423
Query: 354 LKDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNH 412
+ D RI YL SHL +L K IKE VNVK Y W D++E++ G+TVRFG++Y+D+ N
Sbjct: 424 MLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNV 483
Query: 413 LRRYLKYSAYWFKMFL 428
R LK S W++ F+
Sbjct: 484 TDRDLKKSGQWYQSFI 499
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 332 bits (852), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/441 (41%), Positives = 255/441 (57%), Gaps = 22/441 (4%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDL 63
D GD + ++++DI ++ ++ +RFSI+W+RI+P+GK S GVN G+ +Y+ L
Sbjct: 65 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGL 124
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
I+ L+ I PFVTL H+D PQ L++EY GFL P+I+ DF DY D CF+ +GD VK W +
Sbjct: 125 IDGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 184
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHTMLLSHEALVNLYKHK 182
+N+ + GY APGRCS V +C AG+S+TEPYI AH LL+H +V+LY+
Sbjct: 185 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 244
Query: 183 YQPYQKGKIGITILTHWFEPKFKT-XXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIV 241
Y +Q GKIG T++T WF P T FF GWF P+T G YP+ M V
Sbjct: 245 YT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTV 303
Query: 242 GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPP-NAFQLSYTADRQVNLTT---- 296
G RLP F+ E+ LVKGS+DFL +NYY T YA +P P NA + D LT
Sbjct: 304 GARLPTFSPEETNLVKGSYDFLGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKLTYINAS 363
Query: 297 --------ERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
E DG S ++ +PKG+ NP IY+TENG++ S
Sbjct: 364 GHYIGPLFESDGGDGSSN-----IYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSE 418
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
K ++ D RI YL SHL +L K IKE VNVK Y W D++E++ G+TVRFG++Y+
Sbjct: 419 NRKESMLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYI 478
Query: 408 DFKNHLRRYLKYSAYWFKMFL 428
++ N R LK S W++ F+
Sbjct: 479 NWNNVTDRDLKKSGQWYQKFI 499
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 251/432 (58%), Gaps = 8/432 (1%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ D + GD+A+ YH Y+ED+K +K +G+ +RFSISW+RILP G +G N G+ +Y
Sbjct: 113 RISDGTNGDVAANSYHMYEEDVKALKDMGMKVYRFSISWSRILPNG--TGKPNQKGIDYY 170
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N+LIN L+ + I P+VT+ H+D PQALE++YGGFL +IV D+ + + CF+++GDRVK
Sbjct: 171 NNLINSLIRHGIVPYVTIWHWDTPQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKN 230
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTA--GDSATEPYIAAHTMLLSHEALVNL 178
W + NEP+ Y G APGRCS + +C GDS EPY A H +LL+H V L
Sbjct: 231 WFTFNEPHTYCCFSYGEGIHAPGRCSPGL-DCAVPEGDSLREPYTAGHHILLAHAEAVEL 289
Query: 179 YKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMR 238
+K Y + KIG+ +EP + D+ GWF +PV G+YP SMR
Sbjct: 290 FKAHYNKHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMR 349
Query: 239 RIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADR--QVNLTT 296
++G RLP FT+ E + S D + +NYYT+ ++ + + + D + TT
Sbjct: 350 SLIGDRLPMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDISSDYTPTLNTDDAYASSETT 409
Query: 297 ERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLP-LKVALK 355
DG +G T W++++PKGL + NP I+ITENG+AD P + L
Sbjct: 410 GSDGNEIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDPEMPDPLD 469
Query: 356 DSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRR 415
D R+ YL H+ + AI +G +V+ ++ W D+FEW +GY+ RFG+ Y+D ++ +R
Sbjct: 470 DWKRLDYLQRHISAVKDAIDQGADVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGNKR 529
Query: 416 YLKYSAYWFKMF 427
LK SA WF F
Sbjct: 530 KLKKSAKWFAKF 541
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/432 (37%), Positives = 250/432 (57%), Gaps = 25/432 (5%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ D S+GD+A+ Y+ ++ED++L+K G+ ++RFS+SW+RI+PKG S VN G+K Y
Sbjct: 47 KIADGSSGDVATDSYNRWREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHY 106
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS-PKIVKDFVDYGDFCFKTYGDRVK 119
LI EL+ I PFVTL H+D PQAL++ YGG+L+ + ++DF +Y CF+++GD V+
Sbjct: 107 RTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQ 166
Query: 120 LWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLY 179
W + NEP + + GY G FAPG SN TEP+I +H ++L+H V LY
Sbjct: 167 NWITFNEPWVISVMGYGNGIFAPGHVSN-----------TEPWIVSHHIILAHAHAVKLY 215
Query: 180 KHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRR 239
+ +++ Q G+IGIT+ +HW P T +F G FA+P+ G YP +++
Sbjct: 216 RDEFKEKQGGQIGITLDSHWLIPYDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKK 275
Query: 240 IVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERD 299
I+G RLP+FT E LVKGS DF +N YTT+ T T D
Sbjct: 276 ILGDRLPEFTPEEIELVKGSSDFFGLNTYTTHLVQDGGSDELAGFVKTGH------TRAD 329
Query: 300 GVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENG--LADDASLPLKVALKDS 357
G +G+ + +GWL + G + + P +Y+TENG + + LP++ A+ D+
Sbjct: 330 GTQLGTQSDMGWLQTYGPGFRWLLNYLWKAYDKP-VYVTENGFPVKGENDLPVEQAVDDT 388
Query: 358 MRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLR-- 414
R Y + E LL+A+ E G +V+ Y+ W+ D+FEW GY VRFG+T+VD++ R
Sbjct: 389 DRQAYYRDYTEALLQAVTEDGADVRGYFGWSLLDNFEWAEGYKVRFGVTHVDYETQKRTP 448
Query: 415 -RYLKYSAYWFK 425
+ ++ + WFK
Sbjct: 449 KKSAEFLSRWFK 460
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/430 (38%), Positives = 239/430 (55%), Gaps = 30/430 (6%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINE 66
TGD+A Y+ +KEDI++++K+G+ ++RFSISW RILP+G +G VN G+ FYN +I+
Sbjct: 57 TGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG--TGRVNQKGLDFYNRIIDT 114
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
LL I PFVT+ H+D P AL+ + GG L+ +I F +Y F+ +GDRVK W + NE
Sbjct: 115 LLEKGITPFVTIFHWDLPFALQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNE 173
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY 186
P + GY G+FAPGR S +EP+ H +L++H V +++ +
Sbjct: 174 PLCSAIPGYGSGTFAPGR-----------QSTSEPWTVGHNILVAHGRAVKVFR---ETV 219
Query: 187 QKGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRL 245
+ GKIGI + + P +FF WFADP+ G+YP SMR+ +G RL
Sbjct: 220 KDGKIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRL 279
Query: 246 PKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVN----LTTERDGV 301
P FT E LV GS DF +N+YT+NY P +AD V L T + G
Sbjct: 280 PTFTPEERALVHGSNDFYGMNHYTSNYIRHRSSPA------SADDTVGNVDVLFTNKQGN 333
Query: 302 PVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIR 361
+G TA+ WL G ++ P IY+TENG A D + + D RI
Sbjct: 334 CIGPETAMPWLRPCAAGFRDFLVWISKRYGYPPIYVTENGAAFDDVVSEDGRVHDQNRID 393
Query: 362 YLHSHLEYLLKAIK-EGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYS 420
YL +++ ++ A++ +GVNVK Y++W+ D+FEW GY+ RFGI YVD+ +R +K S
Sbjct: 394 YLKAYIGAMVTAVELDGVNVKGYFVWSLLDNFEWAEGYSKRFGIVYVDYSTQ-KRIVKDS 452
Query: 421 AYWFKMFLLN 430
YW+ + N
Sbjct: 453 GYWYSNVVKN 462
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 230/435 (52%), Gaps = 28/435 (6%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ D S+G A Y+ EDI L+K +G S+RFSISW+RI+P+G VN G+ Y
Sbjct: 47 KIADGSSGVTACDSYNRTAEDIALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHY 106
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS-PKIVKDFVDYGDFCFKTYGDRVK 119
+++LL I PF+TL H+D P+ L + YGG L+ + DF +Y F+ +V+
Sbjct: 107 VKFVDDLLDAGITPFITLFHWDLPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVR 165
Query: 120 LWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLY 179
W + NEP + GY G+FAPGR S +EP+ H +L++H V Y
Sbjct: 166 NWITFNEPLCSAIPGYGSGTFAPGR-----------QSTSEPWTVGHNILVAHGRAVKAY 214
Query: 180 KHKYQPYQ-KGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESM 237
+ ++P G+IGI + + P +FF WFADP+ G+YP SM
Sbjct: 215 RDDFKPASGDGQIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASM 274
Query: 238 RRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVN---- 293
R+ +G RLP FT E LV GS DF +N+YT+NY P +AD V
Sbjct: 275 RKQLGDRLPTFTPEERALVHGSNDFYGMNHYTSNYIRHRSSPA------SADDTVGNVDV 328
Query: 294 LTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENG--LADDASLPLK 351
L T + G +G T WL G ++ P IY+TENG + ++ LP +
Sbjct: 329 LFTNKQGNCIGPETQSPWLRPCAAGFRDFLVWISKRYGYPPIYVTENGTSIKGESDLPKE 388
Query: 352 VALKDSMRIRYLHSHLEYLLKAIK-EGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFK 410
L+D R++Y + ++ ++ A++ +GVNVK Y+ W+ D+FEW GY RFG+TYVD++
Sbjct: 389 KILEDDFRVKYYNEYIRAMVTAVELDGVNVKGYFAWSLMDNFEWADGYVTRFGVTYVDYE 448
Query: 411 NHLRRYLKYSAYWFK 425
N +R+ K SA K
Sbjct: 449 NGQKRFPKKSAKSLK 463
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 229/434 (52%), Gaps = 36/434 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++F TGD+A G Y ++ED+K +K++GL +RFS+SW+R+LP G +G +N G+ +Y
Sbjct: 42 RVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDG-TTGFINQKGIDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N +I++LL N + P VTL HFD PQ LE++ GG+LS I++ F Y FCF T+GDRVK
Sbjct: 101 NKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W ++NE N + + Y+ G F PG G Y AAH ++ +H + Y
Sbjct: 160 WITINEANVLSVMSYDLGMFPPGIPHFGTGG----------YQAAHNLIKAHARSWHSYD 209
Query: 181 HKYQPYQKGKIGITILTHWFEPKF-KTXXXXXXXXXXXDFFFGWFADPVTF-GNYPESMR 238
++ QKG + +++ W EP + F FA P+ G+YPE ++
Sbjct: 210 SLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVK 269
Query: 239 RIVG----------KRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTA 288
+ RLP+FTE E ++KG+ DF AV YYTT +Q +
Sbjct: 270 SQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLI-------KYQENKKG 322
Query: 289 DRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
+ + E + P S + W++V P G+ + NNP IYITENG
Sbjct: 323 ELGILQDAEIEFFPDPSWINVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPA 382
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIK-EGVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
P L D+ R Y + L KAI+ + VN++ Y W+ D+FEW+ GY+ RFG+ +V
Sbjct: 383 P----LDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHV 438
Query: 408 DFKNHLRRYLKYSA 421
DF++ R + Y++
Sbjct: 439 DFEDPARPRVPYTS 452
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 257 bits (657), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 229/434 (52%), Gaps = 36/434 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++F TGD+A G Y ++ED+K +K++GL +RFS+SW+R+LP G +G +N G+ +Y
Sbjct: 42 RVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDG-TTGFINQKGIDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N +I++LL N + P VTL HFD PQ LE++ GG+LS I++ F Y FCF T+GDRVK
Sbjct: 101 NKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W ++NE N + + Y+ G F PG G Y AAH ++ +H + Y
Sbjct: 160 WITINEANVLSVMSYDLGMFPPGIPHFGTGG----------YQAAHNLIKAHARSWHSYD 209
Query: 181 HKYQPYQKGKIGITILTHWFEPKF-KTXXXXXXXXXXXDFFFGWFADPVTF-GNYPESMR 238
++ QKG + +++ W EP + F FA P+ G+YPE ++
Sbjct: 210 SLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVK 269
Query: 239 RIVG----------KRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTA 288
+ RLP+FTE E ++KG+ DF AV YYTT +Q +
Sbjct: 270 SQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLI-------KYQENKKG 322
Query: 289 DRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
+ + E + P S + W++V P G+ + NNP IYITENG
Sbjct: 323 ELGILQDAEIEFFPDPSWKNVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPA 382
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIK-EGVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
P L D+ R Y + L KAI+ + VN++ Y W+ D+FEW+ GY+ RFG+ +V
Sbjct: 383 P----LDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHV 438
Query: 408 DFKNHLRRYLKYSA 421
DF++ R + Y++
Sbjct: 439 DFEDPARPRVPYTS 452
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 229/434 (52%), Gaps = 36/434 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++F TGD+A G Y ++ED+K +K++GL +RFS+SW+R+LP G +G +N G+ +Y
Sbjct: 42 RVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDG-TTGFINQKGIDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
N +I++LL N + P VTL HFD PQ LE++ GG+LS I++ F Y FCF T+GDRVK
Sbjct: 101 NKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W ++N+ N + + Y+ G F PG G Y AAH ++ +H + Y
Sbjct: 160 WITINQANVLSVMSYDLGMFPPGIPHFGTGG----------YQAAHNLIKAHARSWHSYD 209
Query: 181 HKYQPYQKGKIGITILTHWFEPKF-KTXXXXXXXXXXXDFFFGWFADPVTF-GNYPESMR 238
++ QKG + +++ W EP + F FA P+ G+YPE ++
Sbjct: 210 SLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVK 269
Query: 239 RIVG----------KRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTA 288
+ RLP+FTE E ++KG+ DF AV YYTT +Q +
Sbjct: 270 SQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLI-------KYQENKKG 322
Query: 289 DRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
+ + E + P S + W++V P G+ + NNP IYITENG
Sbjct: 323 ELGILQDAEIEFFPDPSWKNVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPA 382
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIK-EGVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
P L D+ R Y + L KAI+ + VN++ Y W+ D+FEW+ GY+ RFG+ +V
Sbjct: 383 P----LDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHV 438
Query: 408 DFKNHLRRYLKYSA 421
DF++ R + Y++
Sbjct: 439 DFEDPARPRVPYTS 452
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 229/430 (53%), Gaps = 32/430 (7%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ + TGDIA YH Y+EDI+LMK++G+ S+RFS SW RILP+GK G VN G+ FY
Sbjct: 51 KIENGDTGDIACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEGK--GRVNQKGLDFY 108
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L++ LL +I+P +TL H+D PQAL+++ GG+ + K F +Y F+ + V L
Sbjct: 109 KRLVDNLLKANIRPMITLYHWDLPQALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDL 167
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP + G+ G+ APG D T +A H +LLSH V++++
Sbjct: 168 WVTHNEPWVVAFEGHAFGNHAPG----------TKDFKTALQVAHH-LLLSHGMAVDIFR 216
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+ P G+IGIT+ P + D+ WF PV G+YPE + I
Sbjct: 217 EEDLP---GEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHI 273
Query: 241 VGKRLPKFTE--GESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTER 298
+ L FT G+ ++ DFL +NYY+ P N F + +V +R
Sbjct: 274 YEQNLGAFTTQPGDMDIISRDIDFLGINYYSRMVVRHKPGDNLF------NAEVVKMEDR 327
Query: 299 DGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSM 358
T +GW ++P+GL + + +YITENG A D L + + D
Sbjct: 328 ------PSTEMGWE-IYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEK 380
Query: 359 RIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLK 418
RI YL H + KA+K+GV ++ YY+W+ D+FEW GY+ RFG+ YVD++N RR+LK
Sbjct: 381 RINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLK 440
Query: 419 YSAYWFKMFL 428
SA W++ +
Sbjct: 441 DSALWYREVI 450
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 237/435 (54%), Gaps = 40/435 (9%)
Query: 2 MFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYN 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
+ NEP M+GY AP + +G+ Y+AAHT++ +H + +LY
Sbjct: 170 LTFNEP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPV--TFGNYPESMR 238
+++ Q GK+GI++ +W EP + F G +A P+ G+YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 239 RIVGK----------RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTA 288
V + RLP+FT E ++G+ DFL +N+YT + ++ S
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSG--VEGYEPSRYR 336
Query: 289 DRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
D V LT + P+ +A WL V P G ++ NNP ++ITENG +D
Sbjct: 337 DSGVILTQDA-AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
L D+ R+ Y HL+ +LKAI E GVNV Y W+ D+FEW GY+ +FGI V
Sbjct: 391 ----GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAV 446
Query: 408 DFKNHLR-RYLKYSA 421
DF++ R R K SA
Sbjct: 447 DFEDPARPRIPKESA 461
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 237/435 (54%), Gaps = 40/435 (9%)
Query: 2 MFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYN 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
+ N+P M+GY AP + +G+ Y+AAHT++ +H + +LY
Sbjct: 170 LTFNDP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPV--TFGNYPESMR 238
+++ Q GK+GI++ +W EP + F G +A P+ G+YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 239 RIVGK----------RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTA 288
V + RLP+FT E ++G+ DFL +N+YT + ++ S
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSG--VEGYEPSRYR 336
Query: 289 DRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
D V LT + P+ +A WL V P G ++ NNP ++ITENG +D
Sbjct: 337 DSGVILTQDA-AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
L D+ R+ Y HL+ +LKAI E GVNV Y W+ D+FEW GY+ +FGI V
Sbjct: 391 ----GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAV 446
Query: 408 DFKNHLR-RYLKYSA 421
DF++ R R K SA
Sbjct: 447 DFEDPARPRIPKESA 461
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 236/435 (54%), Gaps = 40/435 (9%)
Query: 2 MFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYN 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
+ N P M+GY AP + +G+ Y+AAHT++ +H + +LY
Sbjct: 170 LTFNSP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPV--TFGNYPESMR 238
+++ Q GK+GI++ +W EP + F G +A P+ G+YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 239 RIVGK----------RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTA 288
V + RLP+FT E ++G+ DFL +N+YT + ++ S
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSG--VEGYEPSRYR 336
Query: 289 DRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
D V LT + P+ +A WL V P G ++ NNP ++ITENG +D
Sbjct: 337 DSGVILTQDA-AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
L D+ R+ Y HL+ +LKAI E GVNV Y W+ D+FEW GY+ +FGI V
Sbjct: 391 ----GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAV 446
Query: 408 DFKNHLR-RYLKYSA 421
DF++ R R K SA
Sbjct: 447 DFEDPARPRIPKESA 461
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 236/435 (54%), Gaps = 40/435 (9%)
Query: 2 MFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYN 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
+ N P M+GY AP + +G+ Y+AAHT++ +H + +LY
Sbjct: 170 LTFNAP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPV--TFGNYPESMR 238
+++ Q GK+GI++ +W EP + F G +A P+ G+YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 239 RIVGK----------RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTA 288
V + RLP+FT E ++G+ DFL +N+YT + ++ S
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSG--VEGYEPSRYR 336
Query: 289 DRQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASL 348
D V LT + P+ +A WL V P G ++ NNP ++ITENG +D
Sbjct: 337 DSGVILTQDA-AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 349 PLKVALKDSMRIRYLHSHLEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAGYTVRFGITYV 407
L D+ R+ Y HL+ +LKAI E GVNV Y W+ D+FEW GY+ +FGI V
Sbjct: 391 ----GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAV 446
Query: 408 DFKNHLR-RYLKYSA 421
DF++ R R K SA
Sbjct: 447 DFEDPARPRIPKESA 461
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 244 bits (622), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 221/430 (51%), Gaps = 47/430 (10%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINE 66
GDIA YH YKED++L+K +G+ S+RFSI+W RI PKG G +N G++FY DLI+E
Sbjct: 50 NGDIACDHYHRYKEDVQLLKSLGIKSYRFSIAWPRIFPKG--FGEINQKGIQFYRDLIDE 107
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
L+ NDI+P +T+ H+D PQ L++ GG+ +P++ +VDY + F+ +GDRVK W + NE
Sbjct: 108 LIKNDIEPAITIYHWDLPQKLQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNE 166
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY 186
P GY G APG + +AAH +LLSH V Y+ +
Sbjct: 167 PWVASYLGYALGVHAPGIKDMKMA-----------LLAAHNILLSHFKAVKAYR---ELE 212
Query: 187 QKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR-- 244
Q G+IGIT+ + WF D G YPE M +I
Sbjct: 213 QDGQIGITLNLSTCYSNSADEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNI 272
Query: 245 LPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTER-----D 299
+P+ + T V + DFL +NYYT RQV +
Sbjct: 273 MPELPKELFTEVFETSDFLGINYYT--------------------RQVVKNNSEAFIGAE 312
Query: 300 GVPVGSP-TALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSM 358
V + +P T +GW ++P+GL + N +YITENG A + + ++D
Sbjct: 313 SVAMDNPKTEMGWE-IYPQGLYDLLTRIHRDYGNIDLYITENGAAFNDMVNRDGKVEDEN 371
Query: 359 RIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLK 418
R+ YL++H L AI+ GV +K YYIW+F D+FEW GY RFGI +V++K R +K
Sbjct: 372 RLDYLYTHFAAALSAIEAGVPLKGYYIWSFMDNFEWAEGYEKRFGIVHVNYKTQ-ERTIK 430
Query: 419 YSAYWFKMFL 428
SAYW+K +
Sbjct: 431 KSAYWYKELI 440
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 223/431 (51%), Gaps = 37/431 (8%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDL 63
D + GDIA YH YKED+ ++K + L +RFSISW RI P G + + P G+ +YN+L
Sbjct: 47 DGTNGDIACDSYHKYKEDVAIIKDLNLKFYRFSISWARIAPSG-VMNSLEPKGIAYYNNL 105
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
INEL+ NDI P VT+ H+D PQ L ++ GG+++P + F +Y F +GDRVK W +
Sbjct: 106 INELIKNDIIPLVTMYHWDLPQYL-QDLGGWVNPIMSDYFKEYARVLFTYFGDRVKWWIT 164
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKY 183
NEP V GY+ ++AP G+ Y+A HT L++H LY+ +
Sbjct: 165 FNEPIA-VCKGYSIKAYAPNLNLKTTGH----------YLAGHTQLIAHGKAYRLYEEMF 213
Query: 184 QPYQKGKIGITILTHWFEPK-FKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVG 242
+P Q GKI I+I +F PK ++ F GWF PV G+YP M++ V
Sbjct: 214 KPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVD 273
Query: 243 K----------RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQV 292
+ +LPKFT+ E L+KG+ DF A+N+Y++ PN ++ D
Sbjct: 274 QKSKEEGLPWSKLPKFTKDEIKLLKGTADFYALNHYSSRLVTFGSDPNP---NFNPDASY 330
Query: 293 NLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKV 352
+ + + P ++ P+GL++ NP + ITENG DD
Sbjct: 331 VTSVDEAWL---KPNETPYIIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDDGQ----- 382
Query: 353 ALKDSMRIRYLHSHLEYLLKAIKEG-VNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKN 411
L D +I YL ++L L+A+ E NV Y +W+ D+FEW GY++ FG+ +DF +
Sbjct: 383 -LDDFEKISYLKNYLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFND 441
Query: 412 HLRRYLKYSAY 422
R K +Y
Sbjct: 442 PQRTRTKRESY 452
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 230/425 (54%), Gaps = 34/425 (8%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINE 66
TGD+A Y+ +KEDI++++K+G+ ++RFSISW RILP+G +G VN G+ FYN +I+
Sbjct: 72 TGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG--TGRVNQKGLDFYNRIIDT 129
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
LL I PFVT+ H+D P AL+ + GG+ + +I F +Y F+ +GDRVK W ++NE
Sbjct: 130 LLEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNE 188
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY 186
P + + G+ G APG YV + A H +L +H V +++ +
Sbjct: 189 PWVVAIVGHLYGVHAPGMRDIYVA-----------FRAVHNLLRAHARAVKVFR---ETV 234
Query: 187 QKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFF-FGWFADPVTFGNYPESMRRIVGKRL 245
+ GKIGI +FEP + F + F +P+ G+YPE + + L
Sbjct: 235 KDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYL 294
Query: 246 PKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVGS 305
P+ + + + ++ DF+ +NYY+ + P A ++S+ ERD +P
Sbjct: 295 PENYKDDMSEIQEKIDFVGLNYYSGHLVKFDPDAPA-KVSFV---------ERD-LP--- 340
Query: 306 PTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHS 365
TA+GW V P+G+ N P +YITENG A D + + D RI YL +
Sbjct: 341 KTAMGWEIV-PEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKA 399
Query: 366 HLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWFK 425
H+ KAI+EGV +K Y++W+ D+FEW GY+ RFGI YVD+ +R +K S YW+
Sbjct: 400 HIGQAWKAIQEGVPLKGYFVWSLLDNFEWAEGYSKRFGIVYVDYSTQ-KRIVKDSGYWYS 458
Query: 426 MFLLN 430
+ N
Sbjct: 459 NVVKN 463
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 227/430 (52%), Gaps = 38/430 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ + G++A YH +ED++L+K +G+ +RFSISW R+LP+G +G VN G+ +Y
Sbjct: 43 KVKNGDNGNVACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLPQG--TGEVNRAGLDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ L++ELLAN I+PF TL H+D PQAL+++ GG+ S + F +Y + FK G ++K
Sbjct: 101 HRLVDELLANGIEPFCTLYHWDLPQALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI-AAHTMLLSHEALVNLY 179
W + NEP M SNY+G G+ + I +H +L++H V L+
Sbjct: 160 WITFNEPWCMAF------------LSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLF 207
Query: 180 KHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMR- 238
+ + G+IGI T W P +T + W+ DP+ FG YP+ M
Sbjct: 208 R---ELGISGEIGIAPNTSWAVPYRRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLD 264
Query: 239 --RIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTT 296
+G + P +G+ L+ DF+ +NYYT++ P LS A
Sbjct: 265 WYENLGYK-PPIVDGDMELIHQPIDFIGINYYTSSMNRYNPGEAGGMLSSEA-------- 315
Query: 297 ERDGVPVGSP-TALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALK 355
+ +G+P T +GW ++ +GL + NPT+YITENG + L L +
Sbjct: 316 ----ISMGAPKTDIGWE-IYAEGLYDLLRYTADKYGNPTLYITENGACYNDGLSLDGRIH 370
Query: 356 DSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRR 415
D RI YL HL +AI++G+N+K Y W+ D+FEW GY +RFG+ +VD+ + L R
Sbjct: 371 DQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDNFEWAEGYGMRFGLVHVDY-DTLVR 429
Query: 416 YLKYSAYWFK 425
K S YW+K
Sbjct: 430 TPKDSFYWYK 439
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 215/432 (49%), Gaps = 38/432 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ GD+A +HH+KED++LMK++G +RFS++W RI+P I +N G+ FY
Sbjct: 50 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI---INEEGLLFY 106
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L++E+ + P +TL H+D PQ +E+E GG+ + ++ F Y +G+R+
Sbjct: 107 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 165
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W ++NEP + GY G APG ++ E + AAH +L+ H NL+K
Sbjct: 166 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 214
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
K GKIGIT+ + + F WFA+P+ G YPE M
Sbjct: 215 EKGL---TGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEW 271
Query: 241 VGKRLPKF---TEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G L G+ L++ DFL +NYYT + + + Q+ QV++
Sbjct: 272 YGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASLLQVE-----QVHMEE- 325
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPT-IYITENGLADDASLPLKVALKD 356
PV T +GW +HP+ + + I ITENG A L + ++D
Sbjct: 326 ----PV---TDMGWE-IHPESFYKLLTRIEKDFSKGLPILITENGAAMRDEL-VNGQIED 376
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
+ R RY+ HL+ + I+EG +K Y++W+F D+FEW GY+ RFGI +++++ R
Sbjct: 377 TGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQ-ERT 435
Query: 417 LKYSAYWFKMFL 428
K SA WFK +
Sbjct: 436 PKQSALWFKQMM 447
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 215/432 (49%), Gaps = 38/432 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ GD+A +HH+KED++LMK++G +RFS++W RI+P I +N G+ FY
Sbjct: 52 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI---INEEGLLFY 108
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L++E+ + P +TL H+D PQ +E+E GG+ + ++ F Y +G+R+
Sbjct: 109 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 167
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W ++NEP + GY G APG ++ E + AAH +L+ H NL+K
Sbjct: 168 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 216
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
K GKIGIT+ + + F WFA+P+ G YPE M
Sbjct: 217 EKGL---TGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEW 273
Query: 241 VGKRLPKF---TEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G L G+ L++ DFL +NYYT + + + Q+ QV++
Sbjct: 274 YGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASLLQVE-----QVHMEE- 327
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPT-IYITENGLADDASLPLKVALKD 356
PV T +GW +HP+ + + I ITENG A L + ++D
Sbjct: 328 ----PV---TDMGWE-IHPESFYKLLTRIEKDFSKGLPILITENGAAMRDEL-VNGQIED 378
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
+ R RY+ HL+ + I+EG +K Y++W+F D+FEW GY+ RFGI +++++ R
Sbjct: 379 TGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQ-ERT 437
Query: 417 LKYSAYWFKMFL 428
K SA WFK +
Sbjct: 438 PKQSALWFKQMM 449
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 207/432 (47%), Gaps = 37/432 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ + +GD+A YH Y++D+ LM+++GL ++RFSI+W RI P S +N G+ FY
Sbjct: 43 KIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDS--SRQINQRGLDFY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L+ L DI P TL H+D PQ +E+E GG+LS + F +Y GD++ L
Sbjct: 101 RRLVEGLHKRDILPMATLYHWDLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPL 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP V GY+ G FAPG +G A H +LLSH + ++
Sbjct: 160 WVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVA-----------HHLLLSHGQALQAFR 208
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
P ++GIT+ + P F F +P+ G Y ++ +
Sbjct: 209 -ALSP-AGSQMGITLNFNTIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQATL-M 265
Query: 241 VGKRLPKFTEGES-TLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERD 299
LP+F E + DFL VNYY ++P P ++
Sbjct: 266 AYPNLPEFIAPEDMQTISAPIDFLGVNYYNPMRVKSSPQPPGIEV--------------- 310
Query: 300 GVPVGSP-TALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSM 358
V V SP TA+GW + P+GL + IYITENG A D + D
Sbjct: 311 -VQVESPVTAMGWE-IAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQ 368
Query: 359 RIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLK 418
R+ Y H+ +A+ +GV+++ YY W+ D+FEW GY+ RFGI YVDF+ +R LK
Sbjct: 369 RVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQ-QRTLK 427
Query: 419 YSAYWFKMFLLN 430
SA W++ + N
Sbjct: 428 QSAQWYRDVIAN 439
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 207/432 (47%), Gaps = 37/432 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ + +GD+A YH Y++D+ LM+++GL ++RFSI+W RI P S +N G+ FY
Sbjct: 64 KIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDS--SRQINQRGLDFY 121
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L+ L DI P TL H+D PQ +E+E GG+LS + F +Y GD++ L
Sbjct: 122 RRLVEGLHKRDILPMATLYHWDLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPL 180
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP V GY+ G FAPG +G A H +LLSH + ++
Sbjct: 181 WVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVA-----------HHLLLSHGQALQAFR 229
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
P ++GIT+ + P F F +P+ G Y ++ +
Sbjct: 230 -ALSP-AGSQMGITLNFNTIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQATL-M 286
Query: 241 VGKRLPKFTEGES-TLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERD 299
LP+F E + DFL VNYY ++P P ++
Sbjct: 287 AYPNLPEFIAPEDMQTISAPIDFLGVNYYNPMRVKSSPQPPGIEV--------------- 331
Query: 300 GVPVGSP-TALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSM 358
V V SP TA+GW + P+GL + IYITENG A D + D
Sbjct: 332 -VQVESPVTAMGWE-IAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQ 389
Query: 359 RIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLK 418
R+ Y H+ +A+ +GV+++ YY W+ D+FEW GY+ RFGI YVDF+ +R LK
Sbjct: 390 RVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQ-QRTLK 448
Query: 419 YSAYWFKMFLLN 430
SA W++ + N
Sbjct: 449 QSAQWYRDVIAN 460
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 214/432 (49%), Gaps = 38/432 (8%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ GD+A +HH+KED++LMK++G +RFS++W RI+P I +N G+ FY
Sbjct: 52 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI---INEEGLLFY 108
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L++E+ + P +TL H+D PQ +E+E GG+ + ++ F Y +G+R+
Sbjct: 109 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 167
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W ++NEP + GY G APG ++ E + AAH +L+ H NL+K
Sbjct: 168 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 216
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
K GKIGIT+ + + F WFA+P+ G YPE M
Sbjct: 217 EKGL---TGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEW 273
Query: 241 VGKRLPKF---TEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G L G+ L++ DFL +NYYT + + + Q+ QV++
Sbjct: 274 YGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASLLQV-----EQVHMEE- 327
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPT-IYITENGLADDASLPLKVALKD 356
PV T +GW +HP+ + + I ITENG A L + ++D
Sbjct: 328 ----PV---TDMGWE-IHPESFYKLLTRIEKDFSKGLPILITENGAAMRDEL-VNGQIED 378
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
+ R Y+ HL+ + I+EG +K Y++W+F D+FEW GY+ RFGI +++++ R
Sbjct: 379 TGRHGYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQ-ERT 437
Query: 417 LKYSAYWFKMFL 428
K SA WFK +
Sbjct: 438 PKQSALWFKQMM 449
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 210/422 (49%), Gaps = 43/422 (10%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDL 63
D STG+ A Y Y+EDI LM+ +G+ ++RFS++W RILP+G+ G +NP G+ FY+ L
Sbjct: 45 DGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGR--GRINPKGLAFYDRL 102
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
++ LLA+ I PF+TL H+D P ALEE GG+ S + F +Y + + DRV +A+
Sbjct: 103 VDRLLASGITPFLTLYHWDLPLALEER-GGWRSRETAFAFAEYAEAVARALADRVPFFAT 161
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKY 183
+NEP G+ G APG + N A AAH +LL H V +
Sbjct: 162 LNEPWCSAFLGHWTGEHAPG-----LRNLEAA------LRAAHHLLLGHGLAVEALRAA- 209
Query: 184 QPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGK 243
++GI + F P + F F DP+ YPES R
Sbjct: 210 ---GARRVGIVLN---FAPAYGEDPEAVDVADRYHNRF--FLDPILGKGYPESPFRDPPP 261
Query: 244 RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPV 303
+P + + LV DFL VNYY AP + Y P
Sbjct: 262 -VPILSR-DLELVARPLDFLGVNYYAP--VRVAPGTGTLPVRYLP-------------PE 304
Query: 304 GSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYL 363
G TA+GW V+P+GL P +Y+TENG A + ++D R+ YL
Sbjct: 305 GPATAMGWE-VYPEGLYHLLKRLGREVPWP-LYVTENGAAYPDLWTGEAVVEDPERVAYL 362
Query: 364 HSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYW 423
+H+E L+A +EGV+++ Y++W+ D+FEW GYT RFG+ YVDF + RR K SA W
Sbjct: 363 EAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDFPSQ-RRIPKRSALW 421
Query: 424 FK 425
++
Sbjct: 422 YR 423
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 218/434 (50%), Gaps = 40/434 (9%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQEGLDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ +++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP + G APG T +A + H +L++H V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+ G+IGI W P + WF P+ G+YP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 241 V---GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G +P +G+ ++ D + +NYY+ + P Q ++N+
Sbjct: 266 FAEQGATVP-IQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQ-----SEEINM--- 316
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA-DDASLPLKVALKD 356
G+PV T +GW V +GL E N IYITENG +D + KV +D
Sbjct: 317 --GLPV---TDIGWP-VESRGLYEVLHYLQKY-GNIDIYITENGACINDEVVNGKV--QD 367
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
RI Y+ HL + +AI +G++VK Y W+ D+FEW GY +RFG+ +VDF+ +R
Sbjct: 368 DRRISYMQQHLVQVHRAIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRT- 426
Query: 417 LKYSAYWFKMFLLN 430
K S YW++ + N
Sbjct: 427 PKQSYYWYRNVVGN 440
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 40/434 (9%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQKGLDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ +++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP + G APG T +A + H +L++H V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+ G+IGI W P + WF P+ G+YP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 241 V---GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G +P +G+ ++ D + +NYY+ + P Q ++N+
Sbjct: 266 FAEQGATVP-IQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQ-----SEEINM--- 316
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA-DDASLPLKVALKD 356
G+PV T +GW V +GL E N IYITENG +D + KV +D
Sbjct: 317 --GLPV---TDIGWP-VESRGLYEVLHYLQKY-GNIDIYITENGACINDEVVNGKV--QD 367
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
RI Y+ HL + + I +G++VK Y W+ D+FEW GY +RFG+ +VDF+ +R
Sbjct: 368 DRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRT- 426
Query: 417 LKYSAYWFKMFLLN 430
K S YW++ + N
Sbjct: 427 PKQSYYWYRNVVSN 440
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 40/434 (9%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQKGLDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ +++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP + G APG T +A + H +L++H V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+ G+IGI W P + WF P+ G+YP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 241 V---GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G +P +G+ ++ D + +NYY+ + P Q ++N+
Sbjct: 266 FAEQGATVP-IQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQ-----SEEINM--- 316
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA-DDASLPLKVALKD 356
G+PV T +GW V +GL E N IYITENG +D + KV +D
Sbjct: 317 --GLPV---TDIGWP-VESRGLYEVLHYLQKY-GNIDIYITENGACINDEVVNGKV--QD 367
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
RI Y+ HL + + I +G++VK Y W+ D+FEW GY +RFG+ +VDF+ +R
Sbjct: 368 DRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRT- 426
Query: 417 LKYSAYWFKMFLLN 430
K S YW++ + N
Sbjct: 427 PKESYYWYRNVVSN 440
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 40/434 (9%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 44 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQEGLDYY 101
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ +++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 102 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 160
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP + G APG T +A + H +L++H V ++
Sbjct: 161 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 209
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+ G+IGI W P + WF P+ G+YP+ +
Sbjct: 210 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 266
Query: 241 V---GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G +P +G+ ++ D + +NYY+ + P Q ++N+
Sbjct: 267 FAEQGATVP-IQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQ-----SEEINM--- 317
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA-DDASLPLKVALKD 356
G+PV T +GW V +GL E N IYITENG +D + KV +D
Sbjct: 318 --GLPV---TDIGWP-VESRGLYEVLHYLQKY-GNIDIYITENGACINDEVVNGKV--QD 368
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
RI Y+ HL + + I +G++VK Y W+ D+FEW GY +RFG+ +VDF+ +R
Sbjct: 369 DRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRT- 427
Query: 417 LKYSAYWFKMFLLN 430
K S YW++ + N
Sbjct: 428 PKESYYWYRNVVSN 441
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 209/422 (49%), Gaps = 43/422 (10%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDL 63
D STG+ A Y Y+EDI LM+ +G+ ++RFS++W RILP+G+ G +NP G+ FY+ L
Sbjct: 45 DGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGR--GRINPKGLAFYDRL 102
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
++ LLA+ I PF+TL H+D P ALEE GG+ S + F +Y + + DRV +A+
Sbjct: 103 VDRLLASGITPFLTLYHWDLPLALEER-GGWRSRETAFAFAEYAEAVARALADRVPFFAT 161
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKY 183
+NEP G+ G APG + N A AAH +LL H V +
Sbjct: 162 LNEPWCSAFLGHWTGEHAPG-----LRNLEAA------LRAAHHLLLGHGLAVEALRAA- 209
Query: 184 QPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGK 243
++GI + F P + F F DP+ YPES R
Sbjct: 210 ---GARRVGIVLN---FAPAYGEDPEAVDVADRYHNRF--FLDPILGKGYPESPFRDPPP 261
Query: 244 RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPV 303
+P + + LV DFL VNYY AP + Y P
Sbjct: 262 -VPILSR-DLELVARPLDFLGVNYYAP--VRVAPGTGTLPVRYLP-------------PE 304
Query: 304 GSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYL 363
G TA+GW V+P+GL P +Y+TENG A + ++D R+ YL
Sbjct: 305 GPATAMGWE-VYPEGLHHLLKRLGREVPWP-LYVTENGAAYPDLWTGEAVVEDPERVAYL 362
Query: 364 HSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYW 423
+H+E L+A +EGV+++ Y++W+ D+FEW GYT R G+ YVDF + RR K SA W
Sbjct: 363 EAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRSGLYYVDFPSQ-RRIPKRSALW 421
Query: 424 FK 425
++
Sbjct: 422 YR 423
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 40/434 (9%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQEGLDYY 100
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ +++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYK 180
W + NEP + G APG T +A + H +L++H V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRI 240
+ G+IGI W P + WF P+ G+YP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 241 V---GKRLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTE 297
G +P +G+ ++ D + +NYY+ + P Q ++N+
Sbjct: 266 FAEQGATVP-IQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQ-----SEEINM--- 316
Query: 298 RDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLA-DDASLPLKVALKD 356
G+PV T +GW V +GL E N IYITENG +D + KV +D
Sbjct: 317 --GLPV---TDIGWP-VESRGLYEVLHYLQKY-GNIDIYITENGACINDEVVNGKV--QD 367
Query: 357 SMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRY 416
RI Y+ HL + + I +G++VK Y W+ D+FEW GY +RFG+ +VDF+ +R
Sbjct: 368 DRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRT- 426
Query: 417 LKYSAYWFKMFLLN 430
K S YW++ + N
Sbjct: 427 PKESYYWYRNVVSN 440
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 209/422 (49%), Gaps = 43/422 (10%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDL 63
D STG+ A YH Y+EDI LM+ +G+ +RFS++W RILP+G+ G +NP G+ FY+ L
Sbjct: 45 DGSTGEPACDHYHRYEEDIALMQSLGVGVYRFSVAWPRILPEGR--GRINPKGLAFYDRL 102
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
++ LLA I PF+TL H+D PQALE+ GG+ S + F +Y + + DRV +A+
Sbjct: 103 VDRLLAAGITPFLTLYHWDLPQALEDR-GGWRSRETAFAFAEYAEAVARALADRVPFFAT 161
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKY 183
+NEP G+ G APG + N A AAH +LL H V +
Sbjct: 162 LNEPWCSAFLGHWTGEHAPG-----LRNLEAA------LRAAHHLLLGHGLAVEALRAA- 209
Query: 184 QPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGK 243
++GI + F P + + +F DP+ YPES +
Sbjct: 210 ---GARRVGIVLN---FAPAYGEDPEAVDVADR--YHNRYFLDPILGRGYPESPFQDPPP 261
Query: 244 RLPKFTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPV 303
P + + + DFL VNYY AP + Y P
Sbjct: 262 -APILSRDLEAIAR-PLDFLGVNYYAP--VRVAPGTGPLPVRYLP-------------PE 304
Query: 304 GSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYL 363
G TA+GW V+P+GL P +YITENG A + ++D R+ YL
Sbjct: 305 GPVTAMGWE-VYPEGLYHLLKRLGREVPWP-LYITENGAAYPDLWTGEAVVEDPERVAYL 362
Query: 364 HSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYW 423
+H+E L+A +EGV+++ Y++W+ D+FEW GYT RFG+ YVDF + RR K SA W
Sbjct: 363 EAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDFPSQ-RRIPKRSALW 421
Query: 424 FK 425
++
Sbjct: 422 YR 423
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 193/433 (44%), Gaps = 30/433 (6%)
Query: 1 KMFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ + TGD+A+ YH ++ED+ LM ++GL ++RFS++W RI P G+ G G+ FY
Sbjct: 56 RVRNGDTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRIQPTGR--GPALQKGLDFY 113
Query: 61 NDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L +ELLA I+P TL H+D PQ LE GG+ + F +Y GDRVK
Sbjct: 114 RRLADELLAKGIQPVATLYHWDLPQELENA-GGWPERATAERFAEYAAIAADALGDRVKT 172
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIA---AHTMLLSHEALVN 177
W ++NEP GY G APGR T+P A AH + L H V
Sbjct: 173 WTTLNEPWCSAFLGYGSGVHAPGR--------------TDPVAALRAAHHLNLGHGLAVQ 218
Query: 178 LYKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESM 237
+ + + +T+ H P + F P+ G YPE +
Sbjct: 219 ALRDRLP--ADAQCSVTLNIHHVRPLTDSDADADAVRRIDALANRVFTGPMLQGAYPEDL 276
Query: 238 -RRIVGKRLPKFT-EGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLT 295
+ G F +G+ L DFL VNYY+ A +
Sbjct: 277 VKDTAGLTDWSFVRDGDLRLAHQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPW 336
Query: 296 TERDGV----PVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLK 351
D V P G TA+GW V P GL E + ITENG A +
Sbjct: 337 PGADRVAFHQPPGETTAMGWA-VDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPE 395
Query: 352 VALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKN 411
+ D RI Y+ HL + +AIK+G +V+ Y++W+ D+FEW GY+ RFG YVD+
Sbjct: 396 GNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPT 455
Query: 412 HLRRYLKYSAYWF 424
R K SA W+
Sbjct: 456 GT-RIPKASARWY 467
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 197/436 (45%), Gaps = 38/436 (8%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINE 66
T + AS FYH Y D++L ++ G++ R SI+W+RI P G G VN GV+FY+ L E
Sbjct: 45 TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAE 102
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
++PFVTL HFD P+AL G FL+ + ++ F+DY FCF+ + + V W + NE
Sbjct: 103 CHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNE 160
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY 186
+ Y G F PG + + + + H M++SH V LYK K
Sbjct: 161 IGPIGDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDKGY-- 208
Query: 187 QKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFA-DPVTFGNYPESMRRIVGKRL 245
KG+IG+ P D F D G+Y + V L
Sbjct: 209 -KGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHIL 267
Query: 246 PKFTEGESTLVKGSF----------DFLAVNYYTTNYADAAPPPNAFQLSYTADR----- 290
+ GE L F DFL +NYY +++ A + ++
Sbjct: 268 AE-NGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKY 326
Query: 291 QVNLTTERDGVPVGSPTALGWLFVHPKGL-QEXXXXXXXXXNNPTIYITENGLADDASLP 349
Q+ R T W+ ++P+GL + N IYITENGL
Sbjct: 327 QIKGVGRRVAPDYVPRTDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEF- 384
Query: 350 LKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDF 409
+ + D RI Y+ HLE L AI +G NVK Y+IW+ D F W GY R+G+ YVDF
Sbjct: 385 VDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF 444
Query: 410 KNHLRRYLKYSAYWFK 425
RY K SA+W+K
Sbjct: 445 DTQ-ERYPKKSAHWYK 459
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 197/436 (45%), Gaps = 38/436 (8%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINE 66
T + AS FYH Y D++L ++ G++ R SI+W+RI P G G VN GV+FY+ L E
Sbjct: 45 TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAE 102
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
++PFVTL HFD P+AL G FL+ + ++ F+DY FCF+ + + V W + NE
Sbjct: 103 CHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNE 160
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY 186
+ Y G F PG + + + + H M++SH V LYK K
Sbjct: 161 IGPIGDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDK---G 207
Query: 187 QKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFA-DPVTFGNYPESMRRIVGKRL 245
KG+IG+ P D F D G+Y + V L
Sbjct: 208 YKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHIL 267
Query: 246 PKFTEGESTLVKGSF----------DFLAVNYYTTNYADAAPPPNAFQLSYTADR----- 290
+ GE L F DFL +NYY +++ A + ++
Sbjct: 268 AE-NGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKY 326
Query: 291 QVNLTTERDGVPVGSPTALGWLFVHPKGL-QEXXXXXXXXXNNPTIYITENGLADDASLP 349
Q+ R T W+ ++P+GL + N IYITENGL
Sbjct: 327 QIKGVGRRVAPDYVPRTDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEF- 384
Query: 350 LKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDF 409
+ + D RI Y+ HLE L AI +G NVK Y+IW+ D F W GY R+G+ YVDF
Sbjct: 385 VDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF 444
Query: 410 KNHLRRYLKYSAYWFK 425
RY K SA+W+K
Sbjct: 445 DTQ-ERYPKKSAHWYK 459
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 196/436 (44%), Gaps = 38/436 (8%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINE 66
T + AS FYH Y D++L ++ G++ R SI+W+RI P G G VN GV+FY+ L E
Sbjct: 45 TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAE 102
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
++PFVTL HFD P+AL G FL+ + ++ F+DY FCF+ + + V W + NE
Sbjct: 103 CHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNE 160
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY 186
+ Y G F PG + + + + H M++SH V LYK K
Sbjct: 161 IGPIGDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDKGY-- 208
Query: 187 QKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFA-DPVTFGNYPESMRRIVGKRL 245
KG+IG+ P D F D G+Y + V L
Sbjct: 209 -KGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHIL 267
Query: 246 PKFTEGESTLVKGSF----------DFLAVNYYTTNYADAAPPPNAFQLSYTADR----- 290
+ GE L F DFL +NYY +++ A + ++
Sbjct: 268 AE-NGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKY 326
Query: 291 QVNLTTERDGVPVGSPTALGWLFVHPKGL-QEXXXXXXXXXNNPTIYITENGLADDASLP 349
Q+ R T W+ ++P+GL + N IYIT NGL
Sbjct: 327 QIKGVGRRVAPDYVPRTDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEF- 384
Query: 350 LKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDF 409
+ + D RI Y+ HLE L AI +G NVK Y+IW+ D F W GY R+G+ YVDF
Sbjct: 385 VDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF 444
Query: 410 KNHLRRYLKYSAYWFK 425
RY K SA+W+K
Sbjct: 445 DTQ-ERYPKKSAHWYK 459
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 194/439 (44%), Gaps = 43/439 (9%)
Query: 3 FDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYND 62
+D D AS YH + D+ L+ +G +S+R SI WTR++ + +NP G+ +YN
Sbjct: 42 YDYVGPDTASDAYHQIESDLTLLASLGHNSYRTSIQWTRLIDDFE-QATINPDGLAYYNR 100
Query: 63 LINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWA 122
+I+ LAN I+P + L HFD P AL + YGG+ S +V FV + CF+ +GDRVK W
Sbjct: 101 VIDACLANGIRPVINLHHFDLPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWF 160
Query: 123 SMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHK 182
NEP +V Y P G A + A+ + L+ ++ Y+
Sbjct: 161 VHNEPMVVVEGSYLMQFHYPA--------IVDGKKAVQ---VAYNLALATAKVIQAYRRG 209
Query: 183 YQPYQKGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVG 242
G+IG + P ++ + F + G +PE + ++
Sbjct: 210 PAELSDGRIGTILNLTPAYPASQSEADMAAAHFAELWNNDLFMEAAVHGKFPEELVAVLK 269
Query: 243 KR--LPKFTEGESTLV-KGSFDFLAVNYYTTNYADAAPPPNAFQLSYTAD---------- 289
K L + T E L+ + D+L +N+Y A S++ +
Sbjct: 270 KDGVLWQSTPEELALIAENRVDYLGLNFYHPKRVKAPDAIPVISPSWSPEWYYDPYLMPG 329
Query: 290 RQVNLTTERDGVPVGSPTALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGL---ADDA 346
R++N+ GW ++P+ + + +N +++ENG+ +D
Sbjct: 330 RRMNVDK-------------GWE-IYPEAVYDIAIKMRDHYDNIPWFLSENGVGISGEDR 375
Query: 347 SLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITY 406
++D RI++L HL YL K I+ G N Y++WT D + W Y R+G+
Sbjct: 376 YRDETGQIQDDYRIQFLKEHLTYLHKGIEAGSNCFGYHVWTPIDGWSWLNAYKNRYGLVE 435
Query: 407 VDFKNHLRRYLKYSAYWFK 425
+ +RR K SAYWFK
Sbjct: 436 NNIHTQVRR-PKASAYWFK 453
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 190/425 (44%), Gaps = 29/425 (6%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELLAN 70
A FYHHYKED+KL ++G FR SI+WTRI PKG N G++FY+DL +E L
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L EYGGF + K++ FV + + CF+ Y D+VK W + NE N
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQ 183
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGK 190
+ FAP S V D Y AAH L++ V + H P
Sbjct: 184 ANYQED---FAPFTNSGIVYK-EGDDREAIMYQAAHYELVASARAVKI-GHAINP--NLN 236
Query: 191 IGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPK--F 248
IG + P + +FAD G YPE + + ++ K F
Sbjct: 237 IGCMVAMCPIYPATCNPKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDF 295
Query: 249 TEGEST-LVKGSFDFLAVNYYTTNYADAAPPPNA-FQLSYTADRQVNLTTERDGVPVGSP 306
TE + L +G+ D++ +YY + DA N + T D N P
Sbjct: 296 TERDKKDLFEGTVDYIGFSYYMSFVIDAHRENNPYYDYLETEDLVKN--------PYVKA 347
Query: 307 TALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSH 366
+ W + P+GL+ + P ++I ENG + + D RI YL +H
Sbjct: 348 SDWDWQ-IDPQGLRYALNWFTDMYHLP-LFIVENGFGAIDQVEADGMVHDDYRIDYLGAH 405
Query: 367 LEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAG-YTVRFGITYVD----FKNHLRRYLKYS 420
++ ++KA+ E GV + Y W D G R+G YVD K L+R K S
Sbjct: 406 IKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLS 465
Query: 421 AYWFK 425
W+K
Sbjct: 466 FNWYK 470
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 190/425 (44%), Gaps = 29/425 (6%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELLAN 70
A FYHHYKED+KL ++G FR SI+WTRI PKG N G++FY+DL +E L
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L EYGGF + K++ FV + + CF+ Y D+VK W + NE N
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQ 183
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGK 190
+ FAP S V D Y AAH L++ V + H P
Sbjct: 184 ANYQED---FAPFTNSGIVYK-EGDDREAIMYQAAHYELVASARAVKI-GHAINP--NLN 236
Query: 191 IGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPK--F 248
IG + P + +FAD G YPE + + ++ K F
Sbjct: 237 IGCMVAMCPIYPATCNPKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDF 295
Query: 249 TEGEST-LVKGSFDFLAVNYYTTNYADAAPPPNA-FQLSYTADRQVNLTTERDGVPVGSP 306
TE + L +G+ D++ +YY + DA N + T D N P
Sbjct: 296 TERDKKDLFEGTVDYIGFSYYMSFVIDAHRENNPYYDYLETEDLVKN--------PYVKA 347
Query: 307 TALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSH 366
+ W + P+GL+ + P ++I +NG + + D RI YL +H
Sbjct: 348 SDWDWQ-IDPQGLRYALNWFTDMYHLP-LFIVQNGFGAIDQVEADGMVHDDYRIDYLGAH 405
Query: 367 LEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAG-YTVRFGITYVD----FKNHLRRYLKYS 420
++ ++KA+ E GV + Y W D G R+G YVD K L+R K S
Sbjct: 406 IKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLS 465
Query: 421 AYWFK 425
W+K
Sbjct: 466 FNWYK 470
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 192/428 (44%), Gaps = 29/428 (6%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELLAN 70
A FYHHYKED+KL + G FR SI+WTRI PKG N G++FY+DL +E L
Sbjct: 65 AIDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L EYGGF + K++ FV + + CF+ Y D+VK W + NE N
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQ 183
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGK 190
+ FAP S V D Y AAH L++ V + H P
Sbjct: 184 ANYQED---FAPFTNSGIVYK-EGDDREAIXYQAAHYELVASARAVKI-GHAINP--NLN 236
Query: 191 IGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPK--F 248
IG + P + +FAD G YPE + + ++ K F
Sbjct: 237 IGCXVAXCPIYPATCNPKDILXAQKAXQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDF 295
Query: 249 TEGEST-LVKGSFDFLAVNYYTTNYADAAPPPNA-FQLSYTADRQVNLTTERDGVPVGSP 306
TE + L +G+ D++ +YY + DA N + T D N P
Sbjct: 296 TERDKKDLFEGTVDYIGFSYYXSFVIDAHRENNPYYDYLETEDLVKN--------PYVKA 347
Query: 307 TALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSH 366
+ W + P+GL+ + P ++I ENG + + D RI YL +H
Sbjct: 348 SDWDWQ-IDPQGLRYALNWFTDXYHLP-LFIVENGFGAIDQVEADGXVHDDYRIDYLGAH 405
Query: 367 LEYLLKAIKE-GVNVKAYYIWTFWDDFEWDAG-YTVRFGITYVD----FKNHLRRYLKYS 420
++ +KA+ E GV + Y W D G R+G YVD K L+R K S
Sbjct: 406 IKEXIKAVDEDGVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVDKDDEGKGTLKRSPKLS 465
Query: 421 AYWFKMFL 428
W+K +
Sbjct: 466 FNWYKEVI 473
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 185/427 (43%), Gaps = 31/427 (7%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELLAN 70
A FYH Y EDI+L + G FR SI+WTRI P G S N G++FY+DL +E L N
Sbjct: 69 AIDFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEP-NEAGLQFYDDLFDECLKN 127
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L ++YGG+ + K+++ ++++ CF+ Y D+V W + NE N
Sbjct: 128 GIQPVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQ 187
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGK 190
+G + G + Y AAH L++ A V L H+ P +
Sbjct: 188 TNFESDGAXLTDSGIIHQPGE----NRERWXYQAAHYELVASAAAVQL-GHQINP--DFQ 240
Query: 191 IGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKR---LPK 247
IG I P F +FAD G YP+ +R L
Sbjct: 241 IGCXIAXCPIYPLTAAPADVLFAQRAXQTRF-YFADVHCNGTYPQWLRNRFESEHFNLDI 299
Query: 248 FTEGESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVGSPT 307
E L G+ D++ +YY + F + T N + P +
Sbjct: 300 TAEDLKILQAGTVDYIGFSYYXS-----------FTVKDTGKLAYNEEHDLVKNPYVKAS 348
Query: 308 ALGWLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHL 367
GW V P GL+ + P ++I ENGL + D RI YL HL
Sbjct: 349 DWGWQ-VDPVGLRYAXNWFTDRYHLP-LFIVENGLGAIDKKTADNQIHDDYRIDYLTDHL 406
Query: 368 EYL-LKAIKEGVNVKAYYIWTFWDDFEWDAG-YTVRFGITYVDFKN----HLRRYLKYSA 421
+ L +++GV++ Y W D G + R+G YVD + L+RY K S
Sbjct: 407 RQIKLAVLEDGVDLIGYTPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRYKKDSF 466
Query: 422 YWFKMFL 428
WF+ +
Sbjct: 467 TWFQHVI 473
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 188/432 (43%), Gaps = 45/432 (10%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELLAN 70
A FY HYKEDIKL ++G FR SI+WTRI PKG N G+KFY+D+ +ELL
Sbjct: 66 AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGD-EAQPNEEGLKFYDDMFDELLKY 124
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
+I+P +TL HF+ P L ++YG + + K+V FV + + F+ Y +VK W + NE N
Sbjct: 125 NIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINN- 183
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTM--LLSHE----ALVNLYKHKYQ 184
+ F G C +G TE TM +L H+ AL +
Sbjct: 184 -QRNWRAPLF---------GYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRIN 233
Query: 185 PYQKGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGK 243
P + K+G + P + + F D G YP + +
Sbjct: 234 P--EMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYV--FTDVQLRGYYPSYVLNEWER 289
Query: 244 R--LPKFTEGE-STLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDG 300
R K +G+ L +G+ D+L +YY TN A T D ++
Sbjct: 290 RGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAE--------GGTGDA---ISGFEGS 338
Query: 301 VPVGSPTALGWLF-VHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMR 359
VP A W + + P GL+ P ++I ENG + ++ D R
Sbjct: 339 VPNPYVKASDWGWQIDPVGLRYALCELYERYQRP-LFIVENGFGAYDKVEEDGSINDDYR 397
Query: 360 IRYLHSHLEYLLKAIK-EGVNVKAYYIWTFWDDFEWDAG-YTVRFGITYV----DFKNHL 413
I YL +H+E + KA+ +GV++ Y W D + G Y+ R+G YV D +
Sbjct: 398 IDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDM 457
Query: 414 RRYLKYSAYWFK 425
R K S W+K
Sbjct: 458 SRSRKKSFNWYK 469
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 183/412 (44%), Gaps = 59/412 (14%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELLAN 70
A + Y++DI+LM +G +++RFSI W+R+ P+ N Y ++I+ LL
Sbjct: 45 ACNHWELYRDDIQLMTSLGYNAYRFSIEWSRLFPE---ENKFNEDAFMKYREIIDLLLTR 101
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I P VTL HF P ++ GGFL + +K + Y + + ++VKL A+ NEP
Sbjct: 102 GITPLVTLHHFTSPLWFMKK-GGFLREENLKHWEKYIEKVAELL-EKVKLVATFNEPMVY 159
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGK 190
VM GY + P S + + + A +L +H L K+ K
Sbjct: 160 VMMGYLTAYWPPFIRSPF-----------KAFKVAANLLKAHAIAYELLHGKF------K 202
Query: 191 IGITILTHWFEPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPKFTE 250
+GI P + F F D + G Y + R+P+
Sbjct: 203 VGIVKNIPIILPASDKERDRKAAEKADNLFNWHFLDAIWSGKYRGVFKTY---RIPQ--- 256
Query: 251 GESTLVKGSFDFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVGSPTALG 310
DF+ VNYYT + P L + + ++ +ER T +G
Sbjct: 257 -------SDADFIGVNYYTASEVRHTWNP----LKFFFEVKLADISERK-------TQMG 298
Query: 311 WLFVHPKGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYL 370
W V+PKG+ +YITENG+A L D R+ ++ HL+Y+
Sbjct: 299 WS-VYPKGI--YMALKKASRYGRPLYITENGIA---------TLDDEWRVEFIIQHLQYV 346
Query: 371 LKAIKEGVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAY 422
KAI++G++V+ Y+ W+F D++EW G+ RFG+ VD++ RR K SAY
Sbjct: 347 HKAIEDGLDVRGYFYWSFMDNYEWKEGFGPRFGLVEVDYQTFERRPRK-SAY 397
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 187/469 (39%), Gaps = 117/469 (24%)
Query: 7 TGDIAS---GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGV--------NPL 55
+GD+ ++H YK+D + +K+G+D R I W RI PK V N +
Sbjct: 48 SGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNII 107
Query: 56 GVKFYNDLINEL--LAN------------DIKP-----FVTLLHFDPPQALEEEYG---- 92
V I EL +AN D K + L H+ P + +
Sbjct: 108 SVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKL 167
Query: 93 -------GFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPG 143
G+L K V +FV + F D V +W++MNEPN + GY F PG
Sbjct: 168 GPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPG 227
Query: 144 RCSNYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGKIGITILTHWFEPK 203
S A + A I AH + +++A+ + Y + +G+ W +P
Sbjct: 228 YLS-----FEAAEKAKFNLIQAH--IGAYDAI--------KEYSEKSVGVIYAFAWHDPL 272
Query: 204 FKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSFDFL 263
+ Y + + I K T S KG D++
Sbjct: 273 AE--------------------------EYKDEVEEIRKKDYEFVTILHS---KGKLDWI 303
Query: 264 AVNYYTTNYADA-----APPPNAFQLSYTADRQVNLTTERDG-VPVGSPTA-LGWLFVHP 316
VNYY+ A P P +ER G G P + GW ++P
Sbjct: 304 GVNYYSRLVYGAKDGHLVPLPG-----------YGFMSERGGFAKSGRPASDFGWE-MYP 351
Query: 317 KGLQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYLLKAIKE 376
+GL+ P I ITENG+AD A D R YL SHL+ + A+KE
Sbjct: 352 EGLENLLKYLNNAYELPMI-ITENGMADAA---------DRYRPHYLVSHLKAVYNAMKE 401
Query: 377 GVNVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWFK 425
G +V+ Y W+ D++EW G+ +RFG+ YVDF+ +RYL+ SA F+
Sbjct: 402 GADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETK-KRYLRPSALVFR 449
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 181/465 (38%), Gaps = 111/465 (23%)
Query: 13 GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK--------------------------- 45
G+++ + D L +K+G+++ R + W+RI PK
Sbjct: 57 GYWNLNQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAV 116
Query: 46 GKISGGVNPLGVKFYNDLINELLANDIKPFVTLLHFDPPQAL-----------EEEYGGF 94
++ N V Y ++ + + K + L H+ P L + G+
Sbjct: 117 ERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGW 176
Query: 95 LSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYN--GGSFAPGRCSNYVGNC 152
L+ + V +F Y + G+ +W++MNEPN + GY G F PG S
Sbjct: 177 LNEESVVEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLS-----L 231
Query: 153 TAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGKIGITILTHWFE---------PK 203
A D A I AH A N+ + +P +G+ WFE K
Sbjct: 232 EAADKARRNMIQAHA-----RAYDNIKRFSKKP-----VGLIYAFQWFELLEGPAEVFDK 281
Query: 204 FKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESM--RRIVGKRLPKFTEGESTLVKGSFD 261
FK+ +F D V+ G+ ++ RR + RL D
Sbjct: 282 FKSSKLY------------YFTDIVSKGSSIINVEYRRDLANRL---------------D 314
Query: 262 FLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPVGSPTA-LGWLFVHPKGLQ 320
+L VNYY+ Y L T P +P + GW V+P+GL
Sbjct: 315 WLGVNYYSRLVYKIVDDKPIILHGYGF-----LCTPGGISPAENPCSDFGWE-VYPEGLY 368
Query: 321 EXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNV 380
I +TENG++D +D++R YL SH+ + KA EG+ V
Sbjct: 369 LLLKELYNRYGVDLI-VTENGVSDS---------RDALRPAYLVSHVYSVWKAANEGIPV 418
Query: 381 KAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWFK 425
K Y W+ D++EW G+ +FG+ VDFK +RYL+ SA F+
Sbjct: 419 KGYLHWSLTDNYEWAQGFRQKFGLVMVDFKTK-KRYLRPSALVFR 462
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 186/472 (39%), Gaps = 100/472 (21%)
Query: 7 TGDI---ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R ++ W+RI P
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYNDLINELLANDIKPFVTLLHF-------DPPQALEEEY 91
++ N + Y ++ +L + + + + H+ DP + ++
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPGRCS 146
G+LS + V +F + + + D V +++MNEPN + GY G F PG S
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS 228
Query: 147 NYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY------QKGKIGITILTHWF 200
LS A+ N+ + + Y K +GI F
Sbjct: 229 ---------------------FELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSF 267
Query: 201 EPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSF 260
+P + + WF D + G +IV L KG
Sbjct: 268 QPLTDKDMEAVEMAENDNRW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRL 314
Query: 261 DFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPV-GSPTA-LGWLFVHPKG 318
D++ VNYYT + Y + ER+ V + G PT+ GW F P+G
Sbjct: 315 DWIGVNYYTRTVVKRT------EKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFF-PEG 367
Query: 319 LQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGV 378
L + + +Y+TENG+ADDA D R YL SH+ + +AI G
Sbjct: 368 LYDVLTKYWNRYH-LYMYVTENGIADDA---------DYQRPYYLVSHVYQVHRAINSGA 417
Query: 379 NVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWFKMFLLN 430
+V+ Y W+ D++EW +G+++RFG+ VD+ N R Y + SA ++ N
Sbjct: 418 DVRGYLHWSLADNYEWASGFSMRFGLLKVDY-NTKRLYWRPSALVYREIATN 468
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 186/472 (39%), Gaps = 100/472 (21%)
Query: 7 TGDIAS---GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R ++ W+RI P
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYNDLINELLANDIKPFVTLLHF-------DPPQALEEEY 91
++ N + Y ++ +L + + + + H+ DP + ++
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPGRCS 146
G+LS + V +F + + + D V +++MNEPN + GY G F PG S
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS 228
Query: 147 NYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY------QKGKIGITILTHWF 200
LS A+ N+ + + Y K +GI F
Sbjct: 229 ---------------------FELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSF 267
Query: 201 EPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSF 260
+P + + WF D + G +IV L KG
Sbjct: 268 QPLTDKDMEAVEMAENDNRW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRL 314
Query: 261 DFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPV-GSPTA-LGWLFVHPKG 318
D++ VNYYT + Y + ER+ V + G PT+ GW F P+G
Sbjct: 315 DWIGVNYYTRTVVKRT------EKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFF-PEG 367
Query: 319 LQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGV 378
L + + +Y+TENG+ADDA D R YL SH+ + +AI G
Sbjct: 368 LYDVLTKYWNRYH-LYMYVTENGIADDA---------DYQRPYYLVSHVYQVHRAINSGA 417
Query: 379 NVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWFKMFLLN 430
+V+ Y W+ D++EW +G+++RFG+ VD+ N R Y + SA ++ N
Sbjct: 418 DVRGYLHWSLADNYEWASGFSMRFGLLKVDY-NTKRLYWRPSALVYREIATN 468
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 183/472 (38%), Gaps = 100/472 (21%)
Query: 7 TGDI---ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R + W+R P
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYNDLINELLANDIKPFVTLLHF-------DPPQALEEEY 91
++ N + Y ++ +L + + + H+ DP + ++
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPGRCS 146
G+LS + V +F + + + D V +++MNEPN + GY G F PG S
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS 228
Query: 147 NYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY------QKGKIGITILTHWF 200
LS A+ N+ + + Y K +GI F
Sbjct: 229 ---------------------FELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSF 267
Query: 201 EPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSF 260
+P + + WF D + G +IV L KG
Sbjct: 268 QPLTDKDMEAVEMAENDNRW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRL 314
Query: 261 DFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPV-GSPTA-LGWLFVHPKG 318
D++ VNYYT + Y + ER+ V + G PT+ GW F P+G
Sbjct: 315 DWIGVNYYTRTVVKRT------EKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFF-PEG 367
Query: 319 LQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGV 378
L + + +Y+TENG+ADDA D R YL SH+ + +AI G
Sbjct: 368 LYDVLTKYWNRYH-LYMYVTENGIADDA---------DYQRPYYLVSHVYQVHRAINSGA 417
Query: 379 NVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWFKMFLLN 430
+V+ Y W+ D++EW +G+++RFG+ VD+ N R Y + SA ++ N
Sbjct: 418 DVRGYLHWSLADNYEWASGFSMRFGLLKVDY-NTKRLYWRPSALVYREIATN 468
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 181/452 (40%), Gaps = 88/452 (19%)
Query: 13 GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK--------GKISGG------------- 51
G++ +Y++ + +GL + R + W+RI P+ ++ G
Sbjct: 58 GYWGNYRKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALE 117
Query: 52 -----VNPLGVKFYNDLINELLANDIKPFVTLLHFDPPQALEEEYG----------GFLS 96
N + Y ++ ++L + I + L H+ P L + G+L
Sbjct: 118 QLDKMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLD 177
Query: 97 PKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPGRCSNYVGNCTA 154
+ V +F + + D V ++++MNEPN + GY F PG Y+ A
Sbjct: 178 VRTVIEFAKFSAYVAWKLDDLVYMYSTMNEPNVVWGLGYAAVKSGFPPG----YLCLECA 233
Query: 155 GDSATEPYIAAHTMLLSHEALVNLYKHKYQPYQKGKIGITILTHWFEPKFKTXXXXXXXX 214
G A + + AH +++A+ + K +G+ F P
Sbjct: 234 G-RAMKNLVQAHAR--AYDAV--------KAITKKPVGVIYANSDFTPLTDADREA---- 278
Query: 215 XXXDFFFGWFADPVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTNYAD 274
A+ F N +V +L T + +KG D++ VNYYT
Sbjct: 279 ----------AERAKFDNRWAFFDAVVRGQLGGSTRDD---LKGRLDWIGVNYYTRQVVR 325
Query: 275 AAPPPNAFQLSYTADRQVNLTTERDGVPVGSPTA-LGWLFVHPKGLQEXXXXXXXXXNNP 333
A Y + N + P G P + GW F +P+GL + P
Sbjct: 326 ARGSGYEIVPGYGHGCEPNGVS-----PAGRPCSDFGWEF-YPEGLYNVLKEYWDRYHLP 379
Query: 334 TIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGVNVKAYYIWTFWDDFE 393
+ +TENG+AD+ D R YL SH+ + +A+++GVNV Y W+ D++E
Sbjct: 380 LL-VTENGIADEG---------DYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSLADNYE 429
Query: 394 WDAGYTVRFGITYVDFKNHLRRYLKYSAYWFK 425
W +G++ RFG+ VD+ R + + SA+ ++
Sbjct: 430 WASGFSKRFGLLMVDYSTK-RLHWRPSAFIYR 460
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 182/472 (38%), Gaps = 100/472 (21%)
Query: 7 TGDI---ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R + W+R P
Sbjct: 49 SGDLPENGPGYWGNYKTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYNDLINELLANDIKPFVTLLHF-------DPPQALEEEY 91
++ N + Y ++ +L + + + H+ DP + ++
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPGRCS 146
G+LS + V +F + + + D V +++MNEPN + GY G F PG S
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS 228
Query: 147 NYVGNCTAGDSATEPYIAAHTMLLSHEALVNLYKHKYQPY------QKGKIGITILTHWF 200
LS A+ N+ + + Y K +GI F
Sbjct: 229 ---------------------FELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSF 267
Query: 201 EPKFKTXXXXXXXXXXXDFFFGWFADPVTFGNYPESMRRIVGKRLPKFTEGESTLVKGSF 260
+P + + WF D + G +IV L KG
Sbjct: 268 QPLTDKDMEAVEMAENDNRW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRL 314
Query: 261 DFLAVNYYTTNYADAAPPPNAFQLSYTADRQVNLTTERDGVPV-GSPTA-LGWLFVHPKG 318
D++ VNYYT Y + ER+ V + G PT+ GW F P+G
Sbjct: 315 DWIGVNYYTRTVVKRTGK------GYVSLGGYGHGCERNSVSLAGLPTSDFGWEFF-PEG 367
Query: 319 LQEXXXXXXXXXNNPTIYITENGLADDASLPLKVALKDSMRIRYLHSHLEYLLKAIKEGV 378
L + + +Y+TENG+ADDA D R YL SH+ + +AI G
Sbjct: 368 LYDVLTKYWNRYH-LYMYVTENGIADDA---------DYQRPYYLVSHVYQVHRAINSGA 417
Query: 379 NVKAYYIWTFWDDFEWDAGYTVRFGITYVDFKNHLRRYLKYSAYWFKMFLLN 430
+V+ Y W+ D++EW +G+++RFG+ VD+ N R Y + S+ ++ N
Sbjct: 418 DVRGYLHWSLADNYEWASGFSMRFGLLKVDY-NTKRLYWRPSSLVYREIATN 468
>pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 29/174 (16%)
Query: 45 KGKI-SGGVNPLGVKFYNDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDF 103
KG++ + +P G + ++ L + P + LH Q ++++YG + +++
Sbjct: 168 KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGSY----VIRHV 223
Query: 104 VDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI 163
+++G D+ K+ A + N +V++ + FA SN V C S TE +
Sbjct: 224 LEHG-----RPEDKSKIVAEIR-GNVLVLSQH---KFA----SNVVEKCVTHASRTERAV 270
Query: 164 AAHTMLLS----HEALVNLYKHKYQPYQKGKI-------GITILTHWFEPKFKT 206
+ H AL + K +Y Y K+ I+ H P T
Sbjct: 271 LIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIAT 324
>pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 29/174 (16%)
Query: 45 KGKI-SGGVNPLGVKFYNDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDF 103
KG++ + +P G + ++ L + P + LH Q ++++YG + +++
Sbjct: 167 KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY----VIQHV 222
Query: 104 VDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI 163
+++G D+ K+ A + N +V++ + FA SN V C S TE +
Sbjct: 223 LEHG-----RPEDKSKIVAEIR-GNVLVLSQH---KFA----SNVVEKCVTHASRTERAV 269
Query: 164 AAHTMLLS----HEALVNLYKHKYQPYQKGKI-------GITILTHWFEPKFKT 206
+ H AL + K +Y Y K+ I+ H P T
Sbjct: 270 LIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIAT 323
>pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 29/174 (16%)
Query: 45 KGKI-SGGVNPLGVKFYNDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDF 103
KG++ + +P G + ++ L + P + LH Q ++++YG + +++
Sbjct: 167 KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY----VIQHV 222
Query: 104 VDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI 163
+++G D+ K+ A + N +V++ + FA SN V C S TE +
Sbjct: 223 LEHG-----RPEDKSKIVAEIR-GNVLVLSQH---KFA----SNVVEKCVTHASRTERAV 269
Query: 164 AAHTMLLS----HEALVNLYKHKYQPYQKGKI-------GITILTHWFEPKFKT 206
+ H AL + K +Y Y K+ I+ H P T
Sbjct: 270 LIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIAT 323
>pdb|3RJY|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase In Complex With Substrate
Length = 320
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 11 ASGFYHHYKED--IKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELL 68
G + Y ED K++K+ G DS R I W+ + + K ++ + +++ L
Sbjct: 34 VEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVAL 92
Query: 69 ANDIKPFVTLLHFDPPQALEEEYGGFLSP---KIVKDFVDYGDFCF 111
ND+ + HF+ ++YG L ++ + F DY D F
Sbjct: 93 KNDLVVIINCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLF 138
>pdb|3RJX|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase
Length = 320
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 11 ASGFYHHYKED--IKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELL 68
G + Y ED K++K+ G DS R I W+ + + K ++ + +++ L
Sbjct: 34 VEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVAL 92
Query: 69 ANDIKPFVTLLHFDPPQALEEEYGGFLSP---KIVKDFVDYGDFCF 111
ND+ + HF+ ++YG L ++ + F DY D F
Sbjct: 93 KNDLVVIINCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLF 138
>pdb|3NCO|A Chain A, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
pdb|3NCO|B Chain B, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
Length = 320
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 11 ASGFYHHYKED--IKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYNDLINELL 68
G + Y ED K++K+ G DS R I W+ + + K ++ + +++ L
Sbjct: 34 VEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVAL 92
Query: 69 ANDIKPFVTLLHFDPPQALEEEYGGFLSP---KIVKDFVDYGDFCF 111
ND+ + HF+ ++YG L ++ + F DY D F
Sbjct: 93 KNDLVVIINCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLF 138
>pdb|3MQ2|A Chain A, Crystal Structure Of 16s Rrna Methyltranferase Kamb
pdb|3MQ2|B Chain B, Crystal Structure Of 16s Rrna Methyltranferase Kamb
Length = 218
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 236 SMRRIVGKRLPKFTEGESTLVKGSFDFLAVNYYTTN----YADAAPPPNAFQLSYTADR 290
SMRR+VGKR+ +F++ E ++ +D + ++ T + Y A P+ ++ AD+
Sbjct: 3 SMRRVVGKRVQEFSDAEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADK 61
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,403,531
Number of Sequences: 62578
Number of extensions: 640477
Number of successful extensions: 1613
Number of sequences better than 100.0: 86
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1212
Number of HSP's gapped (non-prelim): 99
length of query: 430
length of database: 14,973,337
effective HSP length: 102
effective length of query: 328
effective length of database: 8,590,381
effective search space: 2817644968
effective search space used: 2817644968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)